HHsearch alignment for GI: 254781037 and conserved domain: pfam01379
>pfam01379 Porphobil_deam Porphobilinogen deaminase, dipyromethane cofactor binding domain.
Probab=100.00 E-value=0 Score=581.94 Aligned_cols=213 Identities=46% Similarity=0.673 Sum_probs=209.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 28997079888899999999999974089983389999973274115875567486226999999998709836997403
Q gi|254781037|r 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSA 84 (307)
Q Consensus 5 ~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAVHSl 84 (307)
T Consensus 1 tIrIgtR~S~LAl~Qa~~v~~~L~~~--~p~~~~ei~~i~T~GD~~~~~~l~~~ggkG~Ftkele~aLl~~~iDiAVHS~ 78 (213)
T pfam01379 1 TIRIGTRKSKLALIQTNHVIEKLKEL--CPDIEVEIVIIKTTGDKILDKPLAKIGGKGLFTKELEEALLNGEIDLAVHSL 78 (213)
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHH--CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCEEEEEC
T ss_conf 96999589999999999999999986--8998689999978784436665311698414269999999709878787604
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCC
Q ss_conf 43211101221012223656831056652432433245673220475302888998423773103307679999986378
Q gi|254781037|r 85 KDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164 (307)
Q Consensus 85 KDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~~~l~~lp~~a~IGTsS~RR~aql~~~~p~l~~~~iRGNv~TRl~Kl~~g 164 (307)
T Consensus 79 KDlP~~~~~~l~i~avl~R~d~rD~Li~~~~~~l~~lp~ga~IGTSS~RR~aql~~~~pdl~~~~iRGNV~TRl~KL~~g 158 (213)
T pfam01379 79 KDVPTELPEGLVLGAIPKREDPRDALVSRNGKSLEDLPEGSVVGTSSLRRSAQLKRKRPDLKFEPLRGNVDTRLRKLDEG 158 (213)
T ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCHHHCCCCCEEECCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCC
T ss_conf 65776479874687664478866644302676665677676553253779999998689984677668889999997578
Q ss_pred CCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHH
Q ss_conf 7655630145454216211222336866735854320789998527612455677
Q gi|254781037|r 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 (307)
Q Consensus 165 ~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il~ 219 (307)
T Consensus 159 ~~DaiiLA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaie~r~~d~~i~~llk 213 (213)
T pfam01379 159 EYDAIILAAAGLKRLGLEDRITQSLPPEDMLPAVGQGALAIECRKGDEEILALLK 213 (213)
T ss_pred CCCEEEEHHHHHHHCCCCCCCCEECCHHHCCCHHHHHHEEEEEECCCHHHHHHHC
T ss_conf 9879863676786668731140671877648837430369988169899999749