HHsearch alignment of GI: 254781037 and MMDB domain: 1gtk_A_1-103_194-219
>1gtk_A (A:1-103,A:194-219) Porphobilinogen deaminase; lyase, biosynthesis of linear tetrapyrrole, all alpha/beta; HET: DPM; 1.66A {Escherichia coli}
Probab=100.00 E-value=7e-43 Score=297.53 Aligned_cols=104 Identities=41% Similarity=0.653 Sum_probs=102.3
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99882899707988889999999999997408998338999997327411587556748622699999999870983699
Q gi|254781037|r 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCA 80 (307)
Q Consensus 1 M~~~~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiA 80 (307)
|++++|+||||+|+||++||++|++.|++.| |++++||++|+|+||+++++||+++||||+||||||++|++|++|+|
T Consensus 1 Mm~~~i~IGTR~S~LAl~Qt~~V~~~L~~~~--P~~~~eiv~i~T~GD~~~~~~L~~~ggKGlFtkELe~aLl~g~iDiA 78 (129)
T 1gtk_A 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIA 78 (129)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHHHHHHC--TTCEEEEEECC-----------------CTTHHHHHHHHHTTSCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHHHHHC--CCCEEEEEEEECCCCCCCCCCHHHCCCCEEEHHHHHHHHHCCCCCEE
T ss_conf 9988679996885999999999999999758--99718999996327434687577738862543899999871877689
Q ss_pred EECCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 74034321110122101222365683
Q gi|254781037|r 81 VHSAKDMPTKLLKGLQISAYLPREDI 106 (307)
Q Consensus 81 VHSlKDlP~~~~~~l~i~a~~~R~d~ 106 (307)
||||||||+.+|+||.|+|+++|+||
T Consensus 79 VHSlKDlPt~l~~gl~iaAv~~ReD~ 104 (129)
T 1gtk_A 79 VHSMKDVPVEFPQGLGLVTICEREDP 104 (129)
T ss_dssp EEEGGGSCSCCCTTEEEEEECCCCCC
T ss_pred EEECCCCCCHHCCCCEEEECCCCCCC
T ss_conf 84035477221188158502556775