HHsearch results for GI: 254781037 and protein with PDBid: 1xs5_A
>1xs5_A 29 kDa protein, membrane lipoprotein TPN32; periplasmic binding protein, methionine, membrane protein; 1.85A {Treponema pallidum} SCOP: c.94.1.1
Probab=97.49 E-value=0.00059 Score=44.55 Aligned_cols=196 Identities=12% Similarity=0.067 Sum_probs=111.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 98828997079888899999999999974089983389999973274115875567486226999999998709836997
Q gi|254781037|r 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81 (307)
Q Consensus 2 ~~~~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAV 81 (307)
+.++||||.=.++=|... +.+.+.+++. ++++|++.+.. | -+..+||.+|++|++.
T Consensus 1 ~~~ti~iG~~~~~~~~~l-~~~k~~~k~~----Gl~Ve~~~f~~----------------g---~~~~~Al~sG~iD~~~ 56 (241)
T 1xs5_A 1 KDETVGVGVLSEPHARLL-EIAKEEVKKQ----HIELRIVEFTN----------------Y---VALNEAVMRGDILMNF 56 (241)
T ss_dssp CCEEEEEEECSTTHHHHH-HHHHHHHHTT----TEEEEEEECSC----------------H---HHHHHHHHHTSSSEEE
T ss_pred CCCEEEEEECCCCHHHHH-HHHHHHHHHC----CCEEEEEEECC----------------C---HHHHHHHHCCCCCEEE
T ss_conf 993299996069859999-9999999974----98899999388----------------1---7789999769976798
Q ss_pred ECCCCCCCC----CCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCC----CCHHHHHHHHHCCCC-------
Q ss_conf 403432111----01221012223656831056652432433245673220475----302888998423773-------
Q gi|254781037|r 82 HSAKDMPTK----LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS----LRRKALLLRWRSDIS------- 146 (307)
Q Consensus 82 HSlKDlP~~----~~~~l~i~a~~~R~d~rD~lv~~~~~~l~~lp~~a~IGTsS----~RR~aql~~~~p~l~------- 146 (307)
+-..|.. ...+..+.++-.-.....++++++++++.+++.|.+|++.. -.+...++...--+.
T Consensus 57 --~g~~p~l~~~~~~~~~~l~~v~~~~~~~~~l~~~~~~s~~d~~~gk~ia~~~~~s~~~~~~~~l~~~~~~~l~~~~~~ 134 (241)
T 1xs5_A 57 --FQHVPHMQQFNQEHNGDLVSVGNVHVEPLALYSRTYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGL 134 (241)
T ss_dssp --EEEHHHHHHHHHHHTCCEEEEEEEEECCCEEECSSCCSGGGCCTTCEEEEECSHHHHHHHHHHHHHTTSCEECTTCCT
T ss_pred --ECCHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCC
T ss_conf --557889999885469738999884146548883686776673488769825888279999999997588134368887
Q ss_pred ---CHHHCC--------CHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEC---CCC
Q ss_conf ---103307--------679999986378765563014545421621122233686673585432078999852---761
Q gi|254781037|r 147 ---VIDFRG--------KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---NNP 212 (307)
Q Consensus 147 ---~~~iRG--------Nv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~---~d~ 212 (307)
..++-. +++.-..-+..+++|+.+...-...+..+.......+..+...|. ++.+.+|+ +++
T Consensus 135 ~~~~~Di~~~~~~~~~~~~~~a~~a~~~~~vda~~~~~p~~~~a~~~~~~~~l~~~~~~~~~----~~~lv~r~~~~~~~ 210 (241)
T 1xs5_A 135 FATVEDVQQNVRNVVLQEVESALLPRVFDQVDGAVINGNYAIMAGLSARRDGLAVEPDASAY----ANVLVVKRGNEADA 210 (241)
T ss_dssp TCCGGGEEECTTCCEEEEECGGGHHHHGGGSSEEEECHHHHHHTTCCTTTTCSEECSCGGGG----CEEEEEETTCTTCH
T ss_pred CCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCEEEECCCCCCE----EEEEEECCHHHCCH
T ss_conf 67765665343445425744767777427775799646489985588766779963789863----79999834010989
Q ss_pred HHHHHHHHHCCHHHH
Q ss_conf 245567762397888
Q gi|254781037|r 213 KAQELVKVINHEDTW 227 (307)
Q Consensus 213 ~i~~il~~Ind~~T~ 227 (307)
.+..+++.+++.++.
T Consensus 211 ~i~~l~~a~~~~ev~ 225 (241)
T 1xs5_A 211 RVQAVLRALCGGRVR 225 (241)
T ss_dssp HHHHHHHHHTSHHHH
T ss_pred HHHHHHHHHCCHHHH
T ss_conf 999999997799999