HHsearch results for GI: 254781037 and protein with PDBid: 3ecr_A
>3ecr_A Porphobilinogen deaminase; heme biosynthesis, porphobilinogen hinge, alternative splicing, cytoplasm, disease mutation, porphyrin biosynthesis; HET: DPM; 2.18A {Homo sapiens} PDB: 3eq1_A*
Probab=100.00 E-value=0 Score=750.95 Aligned_cols=301 Identities=35% Similarity=0.489 Sum_probs=291.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 82899707988889999999999997408998338999997327411587556748622699999999870983699740
Q gi|254781037|r 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 (307)
Q Consensus 4 ~~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAVHS 83 (307)
|+|+||||+|+||+|||++|.+.|++.+ |++++||++|+|+||+++++||+++||||+||||||++|++|+|||||||
T Consensus 22 k~IrIgTR~S~LAl~Qa~~v~~~L~~~~--p~~~~ei~~i~T~GD~~~~~~L~~~ggkG~Ftkele~aLl~g~iDiAVHS 99 (364)
T 3ecr_A 22 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHS 99 (364)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHHHC--TTSEEEEEEC-------------------CCHHHHHHHHHTTSCSEEEEE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHHC--CCCCEEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEC
T ss_conf 4699995899999999999999999758--99818999985466202586188748863229999999964998889872
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCEEEEECC---CCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHH
Q ss_conf 3432111012210122236568310566524---3243324567322047530288899842377310330767999998
Q gi|254781037|r 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 (307)
Q Consensus 84 lKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~---~~~l~~lp~~a~IGTsS~RR~aql~~~~p~l~~~~iRGNv~TRl~K 160 (307)
|||||+++|+||.|+|+++|+|||||||+++ ++++.+||+|++|||||+||++|++++|||++|++|||||+|||+|
T Consensus 100 lKDlP~~~~~gl~i~a~~~R~dprD~lv~~~~~~~~~l~~lp~ga~IGTSS~RR~aql~~~~pdl~i~~iRGNIdTRl~K 179 (364)
T 3ecr_A 100 LKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRK 179 (364)
T ss_dssp GGGSCSSCCTTEEEEEECCCCCCCEEEEECTTCTTCCTTTSCTTCEEECCCHHHHHHHHHHCTTSEEECCCSCHHHHHHH
T ss_pred CCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHCCCCCEEECCCCHHHHHHH
T ss_conf 56577645787621123477982546886563000027457998886037267999998867726245325879999998
Q ss_pred HH-CCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 63-78765563014545421621122233686673585432078999852761245567762397888887889999987
Q gi|254781037|r 161 LN-NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 (307)
Q Consensus 161 l~-~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il~~Ind~~T~~~v~aER~fL~~ 239 (307)
|+ +|+|||||||+|||+||++.++++++|++++|+||||||+||||||++|.++.++++.|||++|+.|+.+||+||+.
T Consensus 180 L~~~ge~DaiILA~AGl~RLgl~~~~~~~l~~~~~~PA~gQGaiaie~r~~d~~~~~ll~~ind~~t~~~v~aER~~L~~ 259 (364)
T 3ecr_A 180 LDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 259 (364)
T ss_dssp HHHSSSCSEEEEEHHHHHHTTCGGGCCEECCTTTCCBCTTTTCEEEEEETTCHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 63348731897656677776642202314685661765452027999805778889998871899899999999999998
Q ss_pred HCCCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEEEEEC-----------------------------CHHHHHHHHH
Q ss_conf 17764885289999999989999999869987899999843-----------------------------9888999999
Q gi|254781037|r 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-----------------------------NRCDAINIGR 290 (307)
Q Consensus 240 L~GgC~~PIGa~A~i~~~~l~l~a~v~s~DG~~~i~~~~~g-----------------------------~~~~a~~LG~ 290 (307)
|+|||++|||+||++++++|+|+|+|+|+||++.++.+.++ +.++|++||+
T Consensus 260 L~ggC~~PIga~a~~~~~~l~l~a~v~s~DG~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~LG~ 339 (364)
T 3ecr_A 260 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITARNIPRGPQLAAQNLGI 339 (364)
T ss_dssp HC--CCSSEEEEEEEETTEEEEEEEEECTTSCSEEEEEEEEECCCCCSCCCCCTTCCCBTTBCCTTSCHHHHHHHHHHHH
T ss_pred HCCCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 39799885588999989999999999999876001527874114653222343332100011122234677889999999
Q ss_pred HHHHHHHHHCCHHHCC
Q ss_conf 9999999706056337
Q gi|254781037|r 291 DAAQYIRFISNKNVFN 306 (307)
Q Consensus 291 ~la~~Ll~~g~k~iLn 306 (307)
++|++|+++||++||+
T Consensus 340 ~lAe~Ll~~GA~~iL~ 355 (364)
T 3ecr_A 340 SLANLLLSKGAKNILD 355 (364)
T ss_dssp HHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHCHHHHHH
T ss_conf 9999999819899999