HHsearch results for GI: 254781037 and protein with PDBid: 3ix1_A
>3ix1_A N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine protein; periplasmic N-formyl-4-amino-5-aminomethyl-2-methylpyrimidin protein; HET: NFM; 2.40A {Bacillus halodurans c-125}
Probab=91.13 E-value=0.8 Score=24.26 Aligned_cols=149 Identities=15% Similarity=0.122 Sum_probs=78.4
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCC--CEEEEECCCCCCCEEEEECCC--CCCCCCCCCCEEECCCCCHHH-HHHHH-
Q ss_conf 999987098369974034321110122--101222365683105665243--243324567322047530288-89984-
Q gi|254781037|r 68 IEKKLISGEIDCAVHSAKDMPTKLLKG--LQISAYLPREDIRDVFISHTA--QSLKDLALHSVIGTSSLRRKA-LLLRW- 141 (307)
Q Consensus 68 le~aLl~g~iDiAVHSlKDlP~~~~~~--l~i~a~~~R~d~rD~lv~~~~--~~l~~lp~~a~IGTsS~RR~a-ql~~~- 141 (307)
.-++|..|++|+++-..=-+-.....| +.+.+..-..++.-.++.++. +++.|| +|.+||+++.--.. .+...
T Consensus 47 ~~~al~~G~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~i~~~~DL-kGK~v~~~~~~~~~~~l~~~l 125 (302)
T 3ix1_A 47 PIQLTASGAIPLALSYQPDVILARSKDLPVVSVASVVRSPLNHVMFLAEQDFDSPADL-VGLTVGYPGIPVNEPILKTMV 125 (302)
T ss_dssp HHHHHHHTSCSEEEECHHHHHHHHHTTCCEEEEEEEECSCCEEEEEEGGGCCSSGGGG-TTSEEEECSCTTHHHHHHHHH
T ss_pred HHHHHHCCCCCEEEECHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHH-CCCCCCCCCCCHHHHHHHHHH
T ss_conf 9999977998989977589999873348858998540589736998537798887895-676221789977899999999
Q ss_pred ------HCCCCCHHHCCCHHHHHHHHHCCCCCEEEEE-----HHHHHHCCCCCCCCCCCCHHH-CCCCCCCCEEEEEE--
Q ss_conf ------2377310330767999998637876556301-----454542162112223368667-35854320789998--
Q gi|254781037|r 142 ------RSDISVIDFRGKIETRLNKLNNNKAHAILLA-----YAGIKRLKKEKVIKEILNIED-FPPSPGQGAICIET-- 207 (307)
Q Consensus 142 ------~p~l~~~~iRGNv~TRl~Kl~~g~~DaiilA-----~Agl~RL~l~~~i~~~l~~~~-~~PA~gQGaIaIe~-- 207 (307)
..+++++++..+.. .-|.+|+.||++.. .+.++..|.... .++... -+|...+..++..-
T Consensus 126 ~~~Gl~~~~v~~v~~~~~~~---~al~~G~iDa~~~~~~~~~~~~~~~~g~~~~---~~~~~~~g~~~~~~~~~~~~~~~ 199 (302)
T 3ix1_A 126 EAAGGDYEQVHLMDVGFELG---ASIVSGRADAVVGTYINHEYPVLKHEGHDIS---YFNPVDYGVPEYDELVLISNEAY 199 (302)
T ss_dssp HHTTCCGGGCEEEECTTCHH---HHHHHSSSSEEEEEETTTHHHHHHHTTCCEE---EECGGGTTCCCCCSEEEEEEHHH
T ss_pred HHCCCCCCCEEEECCCCCHH---HHHHCCCCCEECCCCCCCHHHHHHHCCCCCC---CCCHHHCCCCCCCCCCEECCHHH
T ss_conf 97289976117845884389---9998599770006546608999986287632---22588709888766311046999
Q ss_pred ECCCC-HHHHHHHHHCC
Q ss_conf 52761-24556776239
Q gi|254781037|r 208 HVNNP-KAQELVKVINH 223 (307)
Q Consensus 208 r~~d~-~i~~il~~Ind 223 (307)
.++++ .++.+++.+..
T Consensus 200 ~~~~p~~v~~f~~A~~~ 216 (302)
T 3ix1_A 200 VEESGEVLAAFWRAALK 216 (302)
T ss_dssp HHHCHHHHHHHHHHHHH
T ss_pred HHHCHHHHHHHHHHHHH
T ss_conf 98796999999999999