HHsearch results for GI: 254781037 and protein with PDBid: 3ix1_A

>3ix1_A N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine protein; periplasmic N-formyl-4-amino-5-aminomethyl-2-methylpyrimidin protein; HET: NFM; 2.40A {Bacillus halodurans c-125}
Probab=91.13  E-value=0.8  Score=24.26  Aligned_cols=149  Identities=15%  Similarity=0.122  Sum_probs=78.4

Q ss_pred             HHHHHHCCCCEEEEECCCCCCCCCCCC--CEEEEECCCCCCCEEEEECCC--CCCCCCCCCCEEECCCCCHHH-HHHHH-
Q ss_conf             999987098369974034321110122--101222365683105665243--243324567322047530288-89984-
Q gi|254781037|r   68 IEKKLISGEIDCAVHSAKDMPTKLLKG--LQISAYLPREDIRDVFISHTA--QSLKDLALHSVIGTSSLRRKA-LLLRW-  141 (307)
Q Consensus        68 le~aLl~g~iDiAVHSlKDlP~~~~~~--l~i~a~~~R~d~rD~lv~~~~--~~l~~lp~~a~IGTsS~RR~a-ql~~~-  141 (307)
                      .-++|..|++|+++-..=-+-.....|  +.+.+..-..++.-.++.++.  +++.|| +|.+||+++.--.. .+... 
T Consensus        47 ~~~al~~G~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~i~~~~DL-kGK~v~~~~~~~~~~~l~~~l  125 (302)
T 3ix1_A           47 PIQLTASGAIPLALSYQPDVILARSKDLPVVSVASVVRSPLNHVMFLAEQDFDSPADL-VGLTVGYPGIPVNEPILKTMV  125 (302)
T ss_dssp             HHHHHHHTSCSEEEECHHHHHHHHHTTCCEEEEEEEECSCCEEEEEEGGGCCSSGGGG-TTSEEEECSCTTHHHHHHHHH
T ss_pred             HHHHHHCCCCCEEEECHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHH-CCCCCCCCCCCHHHHHHHHHH
T ss_conf             9999977998989977589999873348858998540589736998537798887895-676221789977899999999


Q ss_pred             ------HCCCCCHHHCCCHHHHHHHHHCCCCCEEEEE-----HHHHHHCCCCCCCCCCCCHHH-CCCCCCCCEEEEEE--
Q ss_conf             ------2377310330767999998637876556301-----454542162112223368667-35854320789998--
Q gi|254781037|r  142 ------RSDISVIDFRGKIETRLNKLNNNKAHAILLA-----YAGIKRLKKEKVIKEILNIED-FPPSPGQGAICIET--  207 (307)
Q Consensus       142 ------~p~l~~~~iRGNv~TRl~Kl~~g~~DaiilA-----~Agl~RL~l~~~i~~~l~~~~-~~PA~gQGaIaIe~--  207 (307)
                            ..+++++++..+..   .-|.+|+.||++..     .+.++..|....   .++... -+|...+..++..-  
T Consensus       126 ~~~Gl~~~~v~~v~~~~~~~---~al~~G~iDa~~~~~~~~~~~~~~~~g~~~~---~~~~~~~g~~~~~~~~~~~~~~~  199 (302)
T 3ix1_A          126 EAAGGDYEQVHLMDVGFELG---ASIVSGRADAVVGTYINHEYPVLKHEGHDIS---YFNPVDYGVPEYDELVLISNEAY  199 (302)
T ss_dssp             HHTTCCGGGCEEEECTTCHH---HHHHHSSSSEEEEEETTTHHHHHHHTTCCEE---EECGGGTTCCCCCSEEEEEEHHH
T ss_pred             HHCCCCCCCEEEECCCCCHH---HHHHCCCCCEECCCCCCCHHHHHHHCCCCCC---CCCHHHCCCCCCCCCCEECCHHH
T ss_conf             97289976117845884389---9998599770006546608999986287632---22588709888766311046999


Q ss_pred             ECCCC-HHHHHHHHHCC
Q ss_conf             52761-24556776239
Q gi|254781037|r  208 HVNNP-KAQELVKVINH  223 (307)
Q Consensus       208 r~~d~-~i~~il~~Ind  223 (307)
                      .++++ .++.+++.+..
T Consensus       200 ~~~~p~~v~~f~~A~~~  216 (302)
T 3ix1_A          200 VEESGEVLAAFWRAALK  216 (302)
T ss_dssp             HHHCHHHHHHHHHHHHH
T ss_pred             HHHCHHHHHHHHHHHHH
T ss_conf             98796999999999999