HHsearch results for GI: 254781037 and protein with PDBid: 3ksx_A
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=90.71 E-value=0.88 Score=24.01 Aligned_cols=149 Identities=18% Similarity=0.186 Sum_probs=82.6
Q ss_pred CCEEEEECCCHHH--HHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 8289970798888--99999999999974089983389999973274115875567486226999999998709836997
Q gi|254781037|r 4 KPFRIGTRCSPLA--LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81 (307)
Q Consensus 4 ~~i~IgtR~S~LA--l~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAV 81 (307)
.+||||-=..... +++.+ ..+++. .++++++++.+.+ | -+.-++|..|++|+++
T Consensus 29 ~~lrIg~~~~~~~~~va~~~---G~f~~~--~~~~~v~~~~~~~----------------g---~~~~~al~sG~~D~~~ 84 (324)
T 3ksx_A 29 AQLRIGYQKAVSSLVLAKQH---RLLEQR--FPRTKITWVEFPA----------------G---PQLLEALNVGSIDLGG 84 (324)
T ss_dssp SEEEEEEETTCHHHHHHHHH---THHHHH--CTTSEEEEEEESS----------------H---HHHHHHHHTTSCSEEE
T ss_pred CEEEEEEECCCCHHHHHHHH---CHHHHH--CCCCCEEEEECCC----------------H---HHHHHHHHCCCCCEEE
T ss_conf 75999961686579999984---869783--8998279997897----------------7---9999999849928896
Q ss_pred ECCCCCCCCCCCC--CEEEEECCCCCCCEEEEECCC---CCCCCCCCCCEEECCCCCHH-HHHHHH-------HCCCCCH
Q ss_conf 4034321110122--101222365683105665243---24332456732204753028-889984-------2377310
Q gi|254781037|r 82 HSAKDMPTKLLKG--LQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRK-ALLLRW-------RSDISVI 148 (307)
Q Consensus 82 HSlKDlP~~~~~~--l~i~a~~~R~d~rD~lv~~~~---~~l~~lp~~a~IGTsS~RR~-aql~~~-------~p~l~~~ 148 (307)
-+.=..-.....| +.+.+...+....+.++.+.. +++.|| +|-+||++..--. ..+.+. ..|++++
T Consensus 85 ~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~iv~~~~s~i~s~~DL-kGK~v~v~~gs~~~~~l~~~L~~~Gl~~~dV~~v 163 (324)
T 3ksx_A 85 AGDIPPLFAQAAGADLLYVGWVPPTPKAETILVPSKSALRTVADL-KGKRIAFQKGSSAHNLLLRVLAKSGLSMRDITPL 163 (324)
T ss_dssp EESHHHHHHHHTTCCEEEEEEECCCGGGEEEEEETTCSCCSGGGG-TTCEEEECTTSHHHHHHHHHHHHTTCCGGGSEEE
T ss_pred ECHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHH-CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf 465999999987998599998963798428998089999997893-8998987568730679999999879973235401
Q ss_pred HHCCCHHHHHHHHHCCCCCEEEEEHHHHHHC
Q ss_conf 3307679999986378765563014545421
Q gi|254781037|r 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 (307)
Q Consensus 149 ~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL 179 (307)
++ +......-|.+|+.|+.++...-...+
T Consensus 164 ~~--~~~~~~~al~~G~vDa~~~~~p~~~~~ 192 (324)
T 3ksx_A 164 YL--SPANARAAFAAGQVDAWAIWDPWYSAL 192 (324)
T ss_dssp EC--CHHHHHHHHHTTCCSEEEEETTHHHHH
T ss_pred EC--CHHHHHHHHHCCCCCEEEECCHHHHHH
T ss_conf 25--826666665313500999815799999