BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase
[Candidatus Liberibacter asiaticus str. psy62]
(307 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040714|gb|ACT57510.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 307
Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust.
Identities = 307/307 (100%), Positives = 307/307 (100%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG
Sbjct: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD
Sbjct: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK
Sbjct: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL
Sbjct: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS
Sbjct: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
Query: 301 NKNVFNF 307
NKNVFNF
Sbjct: 301 NKNVFNF 307
>gi|315122376|ref|YP_004062865.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495778|gb|ADR52377.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 307
Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/307 (79%), Positives = 276/307 (89%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME+K F+IGTR SPLALAHAFETRS LM VHKIP I ++PLSTKGDRITNRTLTEIGG
Sbjct: 1 MEEKDFKIGTRRSPLALAHAFETRSYLMSVHKIPLEKIFVVPLSTKGDRITNRTLTEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEEIE+KLISGEID AVHSAKDMPTKLLKGL+ISAYLPRED+RDVFISHTAQSL D
Sbjct: 61 KGLFTEEIERKLISGEIDFAVHSAKDMPTKLLKGLRISAYLPREDVRDVFISHTAQSLND 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA++S++GTSSLRRKALLLRWR+D+S+IDFRGKIETRL KL N +A A+LLAYAGIKRLK
Sbjct: 121 LAVNSIVGTSSLRRKALLLRWRADLSIIDFRGKIETRLTKLKNKQADAMLLAYAGIKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KE V+KEILN+EDFPPSPGQGAICIETH+NN +A EL INH +TWD+V+CERAFLAEL
Sbjct: 181 KESVVKEILNLEDFPPSPGQGAICIETHMNNTRAHELATAINHRETWDTVSCERAFLAEL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSCKSAIAGF+YCKG +LYFYG +L DGKIFHEVS++GN CDAI IGRDA ++IR I+
Sbjct: 241 DGSCKSAIAGFSYCKGQSLYFYGTILTPDGKIFHEVSKSGNCCDAIQIGRDAGRHIRLIA 300
Query: 301 NKNVFNF 307
+K +FN
Sbjct: 301 DKTIFNL 307
>gi|325294021|ref|YP_004279885.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3]
gi|325061874|gb|ADY65565.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3]
Length = 309
Score = 361 bits (926), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 225/306 (73%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A+ETR+ LM H +P I+ LSTKGDRIT+R L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRNRLMSAHGLPEDMFEIVVLSTKGDRITDRALSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E +L+SGE+D AVHS+KDMPT L KGL +SA+LPRED+RD FI TA L +
Sbjct: 61 KGLFTEELESQLLSGELDIAVHSSKDMPTVLPKGLYLSAFLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G++SLRR+AL+ R R D+SVI FRG++ETRL KL +A A LLA+AG+KRL
Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLSVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V +IL+ +DFPP+P QGAIC+E+ + + + EL+ IN T+D+V CERAFLA L
Sbjct: 181 MENVPTDILDPKDFPPAPAQGAICVESRIGDTRMDELLSPINDIPTYDAVTCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAGFA C G L+F G++L DG+ H V +G R DA ++GR A + +R +
Sbjct: 241 DGSCRTPIAGFATCHGEELHFSGLILTPDGQTSHSVEISGARKDAEDLGRKAGEDVRARA 300
Query: 301 NKNVFN 306
N F+
Sbjct: 301 GSNFFD 306
>gi|15889908|ref|NP_355589.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58]
gi|23821691|sp|Q8UC46|HEM3_AGRT5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15157859|gb|AAK88374.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58]
Length = 309
Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/306 (54%), Positives = 225/306 (73%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A+ETRS LM H +P I+ LSTKGDRIT+R L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRSRLMAAHGLPEEMFEIVVLSTKGDRITDRALSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E +L+SGE+D AVHS+KDMPT L +GL +SA+LPRED+RD FI TA L +
Sbjct: 61 KGLFTEELENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G++SLRR+AL+ R R D++VI FRG ++TRL KL +A A LLA+AG+KRL
Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLNVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K+ V EIL+ ++FPP+P QGAI +E+ + + + +L+ IN T+D+V CERAFLA L
Sbjct: 181 KDNVPTEILDPKEFPPAPAQGAIGVESRIGDARMDKLLAPINDRPTYDAVTCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A C+G L+F G++L DG+ H V +GNR DA+ +G+ A + +R +
Sbjct: 241 DGSCRTPIAGYATCEGDNLHFSGLILTPDGQTSHGVEISGNRRDALILGKKAGEEVRAKA 300
Query: 301 NKNVFN 306
N F
Sbjct: 301 GSNFFE 306
>gi|190893753|ref|YP_001980295.1| porphobilinogen deaminase [Rhizobium etli CIAT 652]
gi|190699032|gb|ACE93117.1| porphobilinogen deaminase protein [Rhizobium etli CIAT 652]
Length = 309
Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 166/306 (54%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D
Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICIESRIGDSRIDDLLAAVNDAATFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|86359485|ref|YP_471377.1| porphobilinogen deaminase [Rhizobium etli CFN 42]
gi|86283587|gb|ABC92650.1| porphobilinogen deaminase protein [Rhizobium etli CFN 42]
Length = 309
Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/306 (54%), Positives = 216/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H + I+ L+TKGDRIT+R L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHNLSEEMFEIVVLTTKGDRITDRPLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D
Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL+ + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGSVETRLRKLDEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +VI ++L+ + FPP+P QGAICIE+ V + K +L+ +N T+DSV+CERAFLA L
Sbjct: 181 KVEVITDVLDPDTFPPAPAQGAICIESRVGDTKIDDLLAAVNDATTFDSVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|209551271|ref|YP_002283188.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537027|gb|ACI56962.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 309
Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 163/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L +GE+D AVHSAKDMPTKL GL +SAYLPREDIRD I TA L D
Sbjct: 61 KGLFTEELEQQLTTGELDFAVHSAKDMPTKLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +V+ +IL+ + FPP+P QGAIC+E+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICLESRIGDTQIDDLLAPVNDAATFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|241206704|ref|YP_002977800.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860594|gb|ACS58261.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 309
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 164/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D
Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGLVETRLRKLEQGEVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARVDDLLAPVNDGPTFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|222150055|ref|YP_002551012.1| porphobilinogen deaminase [Agrobacterium vitis S4]
gi|221737037|gb|ACM38000.1| porphobilinogen deaminase [Agrobacterium vitis S4]
Length = 309
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 164/306 (53%), Positives = 212/306 (69%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A ETR L H + P I+ LST GDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHETRERLATAHGLSPDMFEIVVLSTTGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT E+E++L+SG +D AVHS+KDMPT L GL+ISAYLPRED+RD FI TA L +
Sbjct: 61 KGLFTLELEQQLLSGGLDFAVHSSKDMPTALPDGLEISAYLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +VIG++SLRR+AL+ R R D+ VI +RG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LAEGAVIGSASLRRQALIRRLRPDLQVITYRGAVETRLRKLAAGEVDATLLAVAGLKRLD 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KE VI + L++E FPP+P QGAICIE V++ + Q+L+ INH T+D+V+CERAFLA L
Sbjct: 181 KETVITQYLDLESFPPAPAQGAICIEARVDDRRIQDLLAPINHRPTFDAVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G + G +L DG++ H V G D + +G A + +R +
Sbjct: 241 DGSCRTPIAGYAISDGEMIRLTGTILTPDGQVSHSVEAEGRCADGLALGWSAGEKVRDKA 300
Query: 301 NKNVFN 306
F
Sbjct: 301 GPGFFE 306
>gi|116254224|ref|YP_770062.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258872|emb|CAK09980.1| putative porphobilinogen deaminase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 309
Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 163/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D
Sbjct: 61 KGLFTEELEQKLTAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGEVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARIDDLLAPVNDIMTFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|222087476|ref|YP_002546013.1| porphobilinogen deaminase [Agrobacterium radiobacter K84]
gi|221724924|gb|ACM28080.1| porphobilinogen deaminase [Agrobacterium radiobacter K84]
Length = 322
Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/306 (53%), Positives = 214/306 (69%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRI +RTL EIGG
Sbjct: 14 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHGLPEEMFEIVALTTKGDRIADRTLAEIGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+KL SGE+D AVHSAKDM TKL +GL ++AYLPREDIRD I TA L +
Sbjct: 74 KGLFTQELEEKLTSGELDFAVHSAKDMATKLPEGLALTAYLPREDIRDSVIGRTAPKLIE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G++SLRR+AL+ R R DI+VI FRG ++TRL KL +A A LLA AG+KRL
Sbjct: 134 LPHGATVGSASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLAVAGLKRLG 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VI +IL+ ++FPP+P QGAI IE+ + + + +L+ IN T+D V+CER FLA L
Sbjct: 194 KVDVITDILDPDEFPPAPAQGAIGIESRIGDKRMNDLLAAINDSPTFDIVSCERGFLAAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A C+G + F+G++L DG+ H + GNR DA +G +A Q IR +
Sbjct: 254 DGSCRTPIAGYAVCEGDHIRFFGMILTPDGQQVHTTTIEGNRRDAEALGTNAGQAIRAEA 313
Query: 301 NKNVFN 306
F
Sbjct: 314 GSAFFE 319
>gi|15966832|ref|NP_387185.1| porphobilinogen deaminase [Sinorhizobium meliloti 1021]
gi|307301660|ref|ZP_07581419.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C]
gi|307316316|ref|ZP_07595760.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83]
gi|23821697|sp|Q92LH7|HEM3_RHIME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15076104|emb|CAC47658.1| Probable porphobilinogen deaminase [Sinorhizobium meliloti 1021]
gi|306898156|gb|EFN28898.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83]
gi|306903358|gb|EFN33947.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C]
Length = 309
Score = 335 bits (858), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 215/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLA+A ETR L H +PP I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLAMAQTHETRDRLAAAHGLPPEMFEIVILSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDMPTKL +GL +SA+LPREDIRD F+ +A+ L D
Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI VI +RG++ETRL KL + LLAYAG++RL
Sbjct: 121 LPQGATVGSSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V E+L+ E+FPP+P QGAIC+E + + + L+ I+ T ++V+CER FLA L
Sbjct: 181 MEHVPTELLDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H++ +G DA +G++A + IR +
Sbjct: 241 DGSCRTPIAGYAQSDGTHIRFAGMILTPDGTTSHQIEIDGRAADAERLGQEAGERIRAKA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GPGFFS 306
>gi|163757401|ref|ZP_02164490.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43]
gi|162284903|gb|EDQ35185.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43]
Length = 312
Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 159/305 (52%), Positives = 209/305 (68%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ KP+RIGTR SPLALA A ETR LM H +P I+ LSTKGDRIT+R L EIGGK
Sbjct: 5 QMKPYRIGTRGSPLALAQAHETRERLMAAHDLPESAFEIVVLSTKGDRITDRPLAEIGGK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEE+E++L G +D AVHS+KDMPT L +GL I YL RED RD +IS A L+DL
Sbjct: 65 GLFTEELEEQLSDGRLDLAVHSSKDMPTALPEGLGIVTYLEREDPRDAYISSAAPRLEDL 124
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+G+SSLRR+AL+ R R DISVI FRG ++TRL KL + + HA +LA+AG+KRL K
Sbjct: 125 PQKAVVGSSSLRRQALIRRLRPDISVITFRGLVDTRLRKLADGEVHATMLAFAGLKRLGK 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+V+ +++ E FPP+PGQGAICIE +++ + EL+ I+H DT ++NCER FL LD
Sbjct: 185 SEVVTNLMDPESFPPAPGQGAICIEARLDDERIAELLAPIDHADTHAALNCERGFLGALD 244
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A + + FYG++L DG FH++ G DA +G DA +R +
Sbjct: 245 GSCRTPIAGHATLENGQVSFYGMILTPDGTTFHDIRVQGPAADAAQLGADAGAEVRARAG 304
Query: 302 KNVFN 306
F
Sbjct: 305 SKFFE 309
>gi|227823724|ref|YP_002827697.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234]
gi|227342726|gb|ACP26944.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234]
Length = 309
Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 209/306 (68%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA ETR L H +PP ++ LSTKGDRIT+R L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPPEMFEVVVLSTKGDRITDRPLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDMPTKL GL +SA+LPREDIRD F+ TA L +
Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPDGLFLSAFLPREDIRDAFVGRTAPRLVE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI +RG++ETRL KL + LLA+AG+KRL
Sbjct: 121 LPEGATVGSSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V E+L+ ++FPP+P QGAICIE+ + + L+ I+ T ++V CER FLA L
Sbjct: 181 MTDVPTELLDPKEFPPAPAQGAICIESRDGDDRVNALLAAIDDPRTHEAVACERGFLATL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H V +G DA +GR A + IR +
Sbjct: 241 DGSCRTPIAGYAQSDGTYIRFSGMILTPDGATSHRVEIDGKAQDATELGRKAGEQIRDKA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GPGFFS 306
>gi|150398163|ref|YP_001328630.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419]
gi|150029678|gb|ABR61795.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419]
Length = 330
Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/305 (49%), Positives = 208/305 (68%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA ETR L H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 22 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPVEMFEIVTLSTKGDRITDRSLAEIGG 81
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDM TKL GL +SA+LPRED+RD F+ +A L +
Sbjct: 82 KGLFTEELEQQLLSGDLDFAVHSSKDMTTKLPDGLFLSAFLPREDVRDAFVGRSATRLAE 141
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R D++VI +RG++ETRL KL + LLAYAG++RL
Sbjct: 142 LPQGATVGSSSLRRQALIRRLRPDVNVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 201
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V E+L+ E FPP+P QGAICIE + + + L+ ++ T ++V+CER FLA L
Sbjct: 202 MAHVPTELLDPESFPPAPAQGAICIEARLGDDRINALLSAVDDPRTHEAVSCERGFLATL 261
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H + +G DA +GR+A + IR +
Sbjct: 262 DGSCRTPIAGYAQSDGARIRFSGMILTPDGTTCHRIETDGRTADAAALGREAGERIRAKA 321
Query: 301 NKNVF 305
F
Sbjct: 322 GPEFF 326
>gi|153008310|ref|YP_001369525.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188]
gi|166217778|sp|A6WXJ2|HEM3_OCHA4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151560198|gb|ABS13696.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188]
Length = 314
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/301 (49%), Positives = 196/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ETR LM+ H +P I IIP+ST GDRI +R L+EIGGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIIPMSTAGDRIQDRALSEIGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL +
Sbjct: 71 EEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + E FPP+PGQGAI IET + + + L+ + H +T ++ CERAFLA LDGSC+
Sbjct: 191 TDLADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A G T+ F+G++L DG HE+ G +A IG +AA+++R + F
Sbjct: 251 TPIAGLATVNGDTVSFHGMILKPDGSEAHEIKTEGPASNAAAIGTEAAEHLRAKAGPQFF 310
Query: 306 N 306
Sbjct: 311 E 311
>gi|110635531|ref|YP_675739.1| porphobilinogen deaminase [Mesorhizobium sp. BNC1]
gi|110286515|gb|ABG64574.1| hydroxymethylbilane synthase [Chelativorans sp. BNC1]
Length = 309
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 203/306 (66%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ +IGTR S LALA A ETR+ LM H +P I+ + T GDRI +R L+E GG
Sbjct: 1 MQTDVIKIGTRGSALALAQAAETRARLMVAHGLPEDAFEIVVIRTSGDRIQDRPLSEAGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+ G ID AVHS+KDMPT L GL++SA+L RED+RDVFI A+ L+D
Sbjct: 61 KGLFTKEIEEALLEGRIDLAVHSSKDMPTFLPDGLELSAFLEREDVRDVFIGRAAKRLED 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+AL LR R D+ V FRG ++TRL KL + A LLA AG+KRLK
Sbjct: 121 LPHGANLGTSSLRRQALALRLRPDLKVGVFRGNVQTRLRKLEDGAADGTLLALAGLKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V E+++ FPP+ GQGAICIE+ + + +LV+ I+H T +++CERAFLA L
Sbjct: 181 LEHVATELMDPVIFPPALGQGAICIESRTGDTRIAKLVEAIHHPATGFALSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ +AG A G + F G++L DG+ HE+ +G DA IGRDA + IR +
Sbjct: 241 DGSCRTPMAGLATVDGDRIAFSGMILTPDGREVHEIGGDGAAQDAAEIGRDAGRRIRQKA 300
Query: 301 NKNVFN 306
F
Sbjct: 301 GAGFFE 306
>gi|319780787|ref|YP_004140263.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166675|gb|ADV10213.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 308
Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 141/301 (46%), Positives = 206/301 (68%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKGLFT
Sbjct: 5 LRIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGGKGLFT 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ +L +
Sbjct: 65 KEIEEALLAGRIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKVAKAIAELPRGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL A +LAYAG+KRL E V+
Sbjct: 125 KVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLEEGVAAGTILAYAGLKRLGLEHVV 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+++ ++ FPP+PGQGAI IET + + ++++ ++ T ++ CERAFLA LDGSC+
Sbjct: 185 TDLIPLDVFPPAPGQGAIGIETRIGDRDVEKMLAAVHDVPTGQALACERAFLAALDGSCR 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG+A + L F G++++ DG H V G+ DA IG +AA+ +R + + F
Sbjct: 245 TPIAGYAAIEAGKLSFAGLIISPDGTQSHTVELQGSAQDAARIGGEAARSVRARAGEKFF 304
Query: 306 N 306
+
Sbjct: 305 D 305
>gi|239833011|ref|ZP_04681340.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301]
gi|239825278|gb|EEQ96846.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301]
Length = 314
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/301 (49%), Positives = 195/301 (64%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ETR LM+ H +P I I+P+ST GDRI +R L+EIGGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIVPMSTAGDRIQDRALSEIGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL +
Sbjct: 71 EEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+++ E F P+PGQGAI IET + + + L+ + H +T ++ CERAFLA LDGSC+
Sbjct: 191 TELVDPESFLPAPGQGAIGIETRIGDTRIDALLAPLAHRETGIALACERAFLAALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A G + F+G++L DG HE+ G +A +GR+AA+ IR + F
Sbjct: 251 TPIAGLATVDGDRVSFHGMILKPDGSEAHEIRAEGPVSNAAALGREAAERIRAKAGPQFF 310
Query: 306 N 306
Sbjct: 311 E 311
>gi|13473577|ref|NP_105145.1| porphobilinogen deaminase [Mesorhizobium loti MAFF303099]
gi|23821698|sp|Q98EI7|HEM3_RHILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|14024327|dbj|BAB50931.1| hydroxymethylbilane synthase [Mesorhizobium loti MAFF303099]
Length = 308
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/301 (47%), Positives = 204/301 (67%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKGLFT
Sbjct: 5 LKIGTRGSPLALAQAHETQARLMAAHGLPAEAFEVVVISTSGDRIQDRPLSEAGGKGLFT 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ DL +
Sbjct: 65 KEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIADLLRGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL E V
Sbjct: 125 KVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLEHVA 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA LDGSC+
Sbjct: 185 TDLMPLDIFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDGSCR 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A + L F G++++ DG H V G DA IG +AA+ +R + + F
Sbjct: 245 TPIAGHATIETGNLSFAGLIISPDGTQSHTVELQGPAQDAARIGDEAARTVRAKAGEKFF 304
Query: 306 N 306
+
Sbjct: 305 D 305
>gi|254502424|ref|ZP_05114575.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11]
gi|222438495|gb|EEE45174.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11]
Length = 308
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 199/297 (67%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ P RIGTR S LALA A ETR+ LM H +P I+ + T GD+I +R L+E+GG
Sbjct: 1 MQSNPLRIGTRGSALALAQAHETRARLMAAHDLPEDAFEIVVIKTSGDQIQDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L D
Sbjct: 61 KGLFTKEIEEAMLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLMD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL
Sbjct: 121 LPHGAVVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGEVDATLLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ + +L EDF P+ GQGAICIE+ + + E+++ I+ +T ++ ERAFLA L
Sbjct: 181 LEEEVTSLLETEDFLPAVGQGAICIESREGDERTLEMLQAIHDRETQIRLDAERAFLAVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
DGSC++ I G A G L G VL DG H+ R+G DA+ IG+ A + ++
Sbjct: 241 DGSCRTPIGGLALLNGDELTLKGTVLKPDGSEVHDEVRSGGAVDAVQIGQAAGEALK 297
>gi|260464233|ref|ZP_05812426.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075]
gi|259030036|gb|EEW31319.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075]
Length = 308
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 205/301 (68%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKGLFT
Sbjct: 5 LKIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGGKGLFT 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G ID AVHS+KDMPT+L GL++SA+L RED RD ++ +++ DL +
Sbjct: 65 KEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLSREDARDAYVGKATKTIADLPRGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL + V+
Sbjct: 125 KVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLDHVV 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA LDGSC+
Sbjct: 185 TDLIPLDVFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDGSCR 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG+A +G L F G++++ DG H + G DA IG +AA+ +R + + F
Sbjct: 245 TPIAGYAAIEGGKLSFAGLIISPDGTQSHTIDLQGPAQDAALIGTEAARTVRAKAGEKFF 304
Query: 306 N 306
+
Sbjct: 305 D 305
>gi|306844857|ref|ZP_07477440.1| porphobilinogen deaminase [Brucella sp. BO1]
gi|306274789|gb|EFM56570.1| porphobilinogen deaminase [Brucella sp. BO1]
Length = 314
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGSLDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGAVSDAAALGTDAANRVRAMAGPHFF 310
Query: 306 N 306
+
Sbjct: 311 D 311
>gi|62290744|ref|YP_222537.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941]
gi|82700655|ref|YP_415229.1| porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308]
gi|189024957|ref|YP_001935725.1| porphobilinogen deaminase [Brucella abortus S19]
gi|225853324|ref|YP_002733557.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457]
gi|254690032|ref|ZP_05153286.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|254694521|ref|ZP_05156349.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|254696146|ref|ZP_05157974.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|254731064|ref|ZP_05189642.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|256045496|ref|ZP_05448379.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|256112222|ref|ZP_05453143.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|256258286|ref|ZP_05463822.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|256263189|ref|ZP_05465721.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9]
gi|260546007|ref|ZP_05821747.1| porphobilinogen deaminase [Brucella abortus NCTC 8038]
gi|260562805|ref|ZP_05833291.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|260755568|ref|ZP_05867916.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|260758791|ref|ZP_05871139.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|260760515|ref|ZP_05872858.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884592|ref|ZP_05896206.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|261214839|ref|ZP_05929120.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|265991918|ref|ZP_06104475.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|265993649|ref|ZP_06106206.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|297247130|ref|ZP_06930848.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196]
gi|23821695|sp|Q8YJB0|HEM3_BRUME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|75496218|sp|Q57B08|HEM3_BRUAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123768401|sp|Q2YLM5|HEM3_BRUA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058730|sp|B2S842|HEM3_BRUA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800235|sp|C0RFD1|HEM3_BRUMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|62196876|gb|AAX75176.1| HemC, porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941]
gi|82616756|emb|CAJ11843.1| Porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308]
gi|189020529|gb|ACD73251.1| Porphobilinogen deaminase [Brucella abortus S19]
gi|225641689|gb|ACO01603.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457]
gi|260096114|gb|EEW79990.1| porphobilinogen deaminase [Brucella abortus NCTC 8038]
gi|260152821|gb|EEW87913.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|260669109|gb|EEX56049.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|260670947|gb|EEX57768.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675676|gb|EEX62497.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|260874120|gb|EEX81189.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|260916446|gb|EEX83307.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|262764630|gb|EEZ10551.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|263002984|gb|EEZ15277.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093111|gb|EEZ17246.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9]
gi|297174299|gb|EFH33646.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196]
gi|326539601|gb|ADZ87816.1| porphobilinogen deaminase [Brucella melitensis M5-90]
Length = 314
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 191 TDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310
Query: 306 N 306
+
Sbjct: 311 D 311
>gi|306842959|ref|ZP_07475593.1| porphobilinogen deaminase [Brucella sp. BO2]
gi|306286887|gb|EFM58412.1| porphobilinogen deaminase [Brucella sp. BO2]
Length = 314
Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310
Query: 306 N 306
+
Sbjct: 311 D 311
>gi|254713697|ref|ZP_05175508.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
gi|254715953|ref|ZP_05177764.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261217716|ref|ZP_05931997.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261321437|ref|ZP_05960634.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
gi|260922805|gb|EEX89373.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261294127|gb|EEX97623.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
Length = 314
Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 251 TPIAGLATVEGDRLSFQGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310
Query: 306 N 306
+
Sbjct: 311 D 311
>gi|294851125|ref|ZP_06791798.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026]
gi|294819714|gb|EFG36713.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026]
Length = 314
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGSHFF 310
Query: 306 N 306
+
Sbjct: 311 D 311
>gi|148559606|ref|YP_001259712.1| porphobilinogen deaminase [Brucella ovis ATCC 25840]
gi|166201494|sp|A5VSL5|HEM3_BRUO2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148370863|gb|ABQ60842.1| porphobilinogen deaminase [Brucella ovis ATCC 25840]
Length = 304
Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 1 MKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 61 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 121 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 181 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 241 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 300
Query: 306 N 306
+
Sbjct: 301 D 301
>gi|23502739|ref|NP_698866.1| porphobilinogen deaminase [Brucella suis 1330]
gi|161619804|ref|YP_001593691.1| porphobilinogen deaminase [Brucella canis ATCC 23365]
gi|163843911|ref|YP_001628315.1| porphobilinogen deaminase [Brucella suis ATCC 23445]
gi|254704902|ref|ZP_05166730.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|254707583|ref|ZP_05169411.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|254708880|ref|ZP_05170691.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|256030406|ref|ZP_05444020.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
gi|256059864|ref|ZP_05450051.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|256158389|ref|ZP_05456287.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|256253808|ref|ZP_05459344.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|256370288|ref|YP_003107799.1| porphobilinogen deaminase [Brucella microti CCM 4915]
gi|260169315|ref|ZP_05756126.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|260567624|ref|ZP_05838094.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40]
gi|261220941|ref|ZP_05935222.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|261315070|ref|ZP_05954267.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|261316373|ref|ZP_05955570.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|261323834|ref|ZP_05963031.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|261755596|ref|ZP_05999305.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|261758828|ref|ZP_06002537.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|265987445|ref|ZP_06100002.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
gi|265996901|ref|ZP_06109458.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|38258150|sp|Q8FYI6|HEM3_BRUSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189042875|sp|A9M8M2|HEM3_BRUC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189042876|sp|B0CID9|HEM3_BRUSI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23348756|gb|AAN30781.1| porphobilinogen deaminase [Brucella suis 1330]
gi|161336615|gb|ABX62920.1| porphobilinogen deaminase [Brucella canis ATCC 23365]
gi|163674634|gb|ABY38745.1| porphobilinogen deaminase [Brucella suis ATCC 23445]
gi|256000451|gb|ACU48850.1| porphobilinogen deaminase [Brucella microti CCM 4915]
gi|260157142|gb|EEW92222.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40]
gi|260919525|gb|EEX86178.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|261295596|gb|EEX99092.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|261299814|gb|EEY03311.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|261304096|gb|EEY07593.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|261738812|gb|EEY26808.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|261745349|gb|EEY33275.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|262551369|gb|EEZ07359.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|264659642|gb|EEZ29903.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
Length = 314
Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310
Query: 306 N 306
+
Sbjct: 311 D 311
>gi|17986460|ref|NP_539094.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|237816250|ref|ZP_04595243.1| porphobilinogen deaminase [Brucella abortus str. 2308 A]
gi|17982057|gb|AAL51358.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|237788317|gb|EEP62532.1| porphobilinogen deaminase [Brucella abortus str. 2308 A]
Length = 342
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 39 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 98
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 99 EEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 158
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 159 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 218
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 219 TDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 278
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 279 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 338
Query: 306 N 306
+
Sbjct: 339 D 339
>gi|254717954|ref|ZP_05179765.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|265982897|ref|ZP_06095632.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|306838958|ref|ZP_07471782.1| porphobilinogen deaminase [Brucella sp. NF 2653]
gi|264661489|gb|EEZ31750.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|306405961|gb|EFM62216.1| porphobilinogen deaminase [Brucella sp. NF 2653]
Length = 314
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 131 IVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVGGTFLACAGLRRLGLADVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ DA +G DAA +R ++ + F
Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEEAVSDAAALGTDAANRVRAMAGPHFF 310
Query: 306 N 306
+
Sbjct: 311 D 311
>gi|118592006|ref|ZP_01549400.1| porphobilinogen deaminase [Stappia aggregata IAM 12614]
gi|118435302|gb|EAV41949.1| porphobilinogen deaminase [Stappia aggregata IAM 12614]
Length = 303
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/292 (48%), Positives = 194/292 (66%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A ETR LM H + + I+ + T GDRI +R L+E+GGKGLFT
Sbjct: 1 MRIGTRGSALALAQAHETRDRLMAAHGLAEDSFEIVVIKTSGDRIQDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L DL +
Sbjct: 61 KEIEEALLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLTDLPHGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL A LLA AG++RL E I
Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGAVDATLLAAAGLRRLGLEAEI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L + F P+ GQGAICIE+ ++ E++ I+ E T ++ ERAFLA LDGSC+
Sbjct: 181 TSLLETDQFLPAVGQGAICIESRADDTATLEMLAAIHDEATQIRLDAERAFLAVLDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ I G A G TL+F GIVL DG HE + +G + DA+ IGR + ++
Sbjct: 241 TPIGGLATLDGDTLHFRGIVLKPDGSEVHEATASGLKSDAVQIGRSVGEDLK 292
>gi|254700531|ref|ZP_05162359.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
gi|261751035|ref|ZP_05994744.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
gi|261740788|gb|EEY28714.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
Length = 314
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/301 (47%), Positives = 196/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG R S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 11 LKIGARGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310
Query: 306 N 306
+
Sbjct: 311 D 311
>gi|225628089|ref|ZP_03786124.1| porphobilinogen deaminase [Brucella ceti str. Cudo]
gi|225616914|gb|EEH13961.1| porphobilinogen deaminase [Brucella ceti str. Cudo]
Length = 342
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 39 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 98
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 99 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 158
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 159 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 218
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 219 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 278
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 279 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 338
Query: 306 N 306
+
Sbjct: 339 D 339
>gi|307942602|ref|ZP_07657950.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4]
gi|307774241|gb|EFO33454.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4]
Length = 307
Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 197/306 (64%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RIGTR S LALA A ETR LM H +P I+ + T GD+I +R L+E+GG
Sbjct: 1 MQSTLLRIGTRGSQLALAQAHETRDRLMAAHGLPEDAFEIVVVKTSGDQIQDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE L+ G +D AVHS+KDMPT L GL I+A+LPRED+RD FIS A++L+D
Sbjct: 61 KGLFTKEIEDMLLDGSLDLAVHSSKDMPTVLPAGLDITAFLPREDVRDAFISPKAKTLRD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL+ A LLA+AG+KRL
Sbjct: 121 LPHGAVVGSSSLRRQAMVKRLRPDIDVVMYRGNVQTRLRKLDEGVVDATLLAHAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ ++ +DF P+ GQGAIC+E+ +++ K L+ IN +T + ERAFL L
Sbjct: 181 LGDVVTSVIEADDFVPAVGQGAICLESRLDDEKTNGLLSAINDPETRVRLEAERAFLGVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG+C++ I G A G TL G++L DG HEV +G+ DA IG A + ++ +
Sbjct: 241 DGTCRTPIGGLATVDGDTLTLKGVILKPDGSQMHEVEHSGSVQDAEAIGLAAGEELKSKA 300
Query: 301 NKNVFN 306
N
Sbjct: 301 GPNFLT 306
>gi|328541997|ref|YP_004302106.1| Porphobilinogen deaminase [polymorphum gilvum SL003B-26A1]
gi|326411747|gb|ADZ68810.1| Porphobilinogen deaminase [Polymorphum gilvum SL003B-26A1]
Length = 302
Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 193/300 (64%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A ETR+ LM H + I+ + T GDRI +R L+E+GGKGLFT
Sbjct: 1 MRIGTRGSALALAQAHETRARLMAAHGLAEDAFEIVVIKTSGDRILDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A+ L DL +
Sbjct: 61 KEIEEALLDDRIDLAVHSSKDMPTLLPDGLALTAFLPREDVRDAFVSPKAKMLMDLPQGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL V+
Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNVQTRLQKLEDGAVDATLLAYAGLRRLGLADVV 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+ + F P+ GQGAICIE+ V + L+ I+ +T + ERAFLAELDGSC+
Sbjct: 181 TSLLDTDAFLPAVGQGAICIESRVEDAATLGLLAAIHDRETEIRLTAERAFLAELDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ I G A G L GI+L DG HE++R G DA IGR+A + ++ F
Sbjct: 241 TPIGGLARIDGDRLSLAGIILRPDGSEAHEIAREGAVADAEAIGREAGRTLKAAGGPGFF 300
>gi|90421073|ref|ZP_01228976.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1]
gi|90334708|gb|EAS48485.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1]
Length = 311
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 190/307 (61%), Gaps = 1/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LA A A E R+ LM H +P I +ST GDRI +R L+E+GG
Sbjct: 1 MASDIIRIGTRGSQLAKAQASEVRARLMAAHDLPEEAFEIEVISTTGDRILDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE LI G +D A HS+KDM T +GL++SAYLPRED+RD FI TA ++ +
Sbjct: 61 KGLFTKEIEAALIDGRVDIAAHSSKDMATASPEGLEVSAYLPREDVRDAFIGRTAATIDE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IG++SLRR++LL R R D+ VI FRG +++RL KL + A LLA AG+ R+
Sbjct: 121 LPHGATIGSASLRRQSLLKRMRPDLKVITFRGNVQSRLRKLEEGQVDATLLALAGLNRMA 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V EIL +E F P+PGQGAICI+ + + + LV I T ++ ERAFLAEL
Sbjct: 181 MQDVATEILEVERFLPAPGQGAICIQNRIGDERVHGLVAAIADPRTTVALTAERAFLAEL 240
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DGSC++ IA A + T+ +G++L DG HE R G DA +GR A + +
Sbjct: 241 DGSCRTPIAAHAVLAEDGTVTLHGMILTPDGSRMHETRRTGIAADAEALGRLAGRDVLDA 300
Query: 300 SNKNVFN 306
+ F+
Sbjct: 301 AGPGFFD 307
>gi|254473214|ref|ZP_05086612.1| porphobilinogen deaminase [Pseudovibrio sp. JE062]
gi|211957935|gb|EEA93137.1| porphobilinogen deaminase [Pseudovibrio sp. JE062]
Length = 307
Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 136/307 (44%), Positives = 195/307 (63%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KP RIGTR S LALA A ETR+ L H + + I+ + T GD+I +R L+E GG
Sbjct: 1 MQTKPIRIGTRGSALALAQAHETRARLAKAHGLTDDDFEIVVIKTTGDQIQDRPLSEAGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+ ID AVHS+KDMPT L GL ++AYLPRED+RD FIS + L D
Sbjct: 61 KGLFTKEIEEALLDKSIDLAVHSSKDMPTVLPDGLGMTAYLPREDVRDAFISPKVEKLTD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A + R R D+ V+ +RG ++TRL KL+ A LAYAG++RL
Sbjct: 121 LPQGAVVGSSSLRRQAQIKRLRPDLDVVMYRGNLQTRLRKLDEGVVDATFLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ ++++E F P+ GQGAI IE + + + ++ I+H +T + ERA+LAE+
Sbjct: 181 QGDLVTSLMDLEHFLPAVGQGAIGIEARLGDEETARILAPIHHAETESRLLLERAYLAEM 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG ++ +G + F G V+ DG H V G DA IGR+ + ++ S
Sbjct: 241 DGSCRTPIAGLSHVEGDRIKFRGEVIKPDGSQTHTVEGEGPVSDAEEIGRELGKELKAKS 300
Query: 301 NKNVFNF 307
N
Sbjct: 301 GPNFLEL 307
>gi|114705601|ref|ZP_01438504.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506]
gi|114538447|gb|EAU41568.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506]
Length = 316
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 195/302 (64%), Gaps = 1/302 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA A E R+ L+ H + + I +ST GDRI +R L+E+GGKGLFT
Sbjct: 8 IRIGTRGSPLALAQASEVRARLIAAHGLTEDDFAIEVISTSGDRILDRPLSEVGGKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ ID AVHS+KDM T + GL I+A+L RED+RD FI A++L DL +
Sbjct: 68 KEIEAALLDRRIDLAVHSSKDMATAIPDGLAITAFLEREDVRDAFIGRDAKTLADLPEGA 127
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G++SLRR+AL+ R R D++ I FRG ++TRL KL +A A LLA AG+ R++ +
Sbjct: 128 TVGSASLRRQALIKRLRPDLNTIIFRGNVQTRLRKLGEGQADATLLALAGLNRMEMQHHA 187
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+IL EDFPP+PGQGAICIE+ + + + LV I H++T +++ ERAFL LDGSC+
Sbjct: 188 TDILEPEDFPPAPGQGAICIESRQGDTRIENLVSAIVHDETSIALHAERAFLKVLDGSCR 247
Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IA A S + F+G++L DG HEV G+ A+ +G A + + + +
Sbjct: 248 TPIAARAVLWDSGRIAFHGMILRPDGTEVHEVHDEGDADGAVALGERAGRSVLEAAGPHF 307
Query: 305 FN 306
F+
Sbjct: 308 FD 309
>gi|326409887|gb|ADZ66952.1| Porphobilinogen deaminase [Brucella melitensis M28]
Length = 277
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 180/274 (65%)
Query: 33 IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLL 92
+P I I+P+ST GDRI +R L+E+GGKGLFTEEIE+ L G ID AVHS KDMPT L
Sbjct: 1 MPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTALP 60
Query: 93 KGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRG 152
+GL +S +L RED RD FI +A+ DL + +G+SSLRR+AL+ R R DI V+ +RG
Sbjct: 61 EGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRRQALIRRLRPDIEVVMYRG 120
Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212
++TRL KL+ + LA AG++RL VI ++L+ FPP+PGQGAI IE+ + +
Sbjct: 121 NVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDVLDPSVFPPAPGQGAIGIESRIGDE 180
Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+ L+ + H +T ++ CERAFL LDGSC++ IAG A +G L F G++L DG+
Sbjct: 181 RIDVLLAPLAHRETQIALACERAFLGALDGSCRTPIAGLATVEGDRLSFRGMILTPDGRQ 240
Query: 273 FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
HEV+ G DA +G DAA +R ++ + F+
Sbjct: 241 AHEVTAEGVVSDAAALGTDAANRVRAMAGPHFFD 274
>gi|218509456|ref|ZP_03507334.1| porphobilinogen deaminase [Rhizobium etli Brasil 5]
Length = 279
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/226 (58%), Positives = 164/226 (72%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 54 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 113
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D
Sbjct: 114 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 173
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 174 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 233
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T
Sbjct: 234 KVEVLTDILDPDTFPPAPAQGAICIESRIGDTRIDDLLAAVNDAAT 279
>gi|21328661|gb|AAM48667.1| porphobilinogen deaminase [uncultured marine proteobacterium]
Length = 316
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 176/268 (65%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K P IGTR SPLALA A+ETR+ L +P I+ + T GDR+T+R L EIGGKG
Sbjct: 9 KTPLNIGTRGSPLALAQAYETRARLAKAFDLPFEAFEIVVIMTTGDRVTDRPLKEIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ ++ G ID AVHS KDMP GL + YLPRED+RD FIS + +L DL+
Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPVLQPDGLVLDTYLPREDVRDAFISLSGGALSDLS 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A L R D+ V++FRG ++TRL KL N A A LA AG+KRL +
Sbjct: 129 PGAVVGTSSLRRQAQLKLRRPDLQVVEFRGNLQTRLKKLENQVAEATFLAMAGLKRLNMD 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+V ++ + ++D P+ QGAI IE +N+ + +++ I+ +T + ERAFLA LDG
Sbjct: 189 EVPRQAIEVDDMLPAVAQGAIGIERRINDGRMADMLAAIHDRETGQRLAAERAFLAALDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
SC++ IAG + +GST+ G VL DG
Sbjct: 249 SCETPIAGLSELQGSTMRLRGEVLRPDG 276
>gi|84516581|ref|ZP_01003940.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53]
gi|84509617|gb|EAQ06075.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53]
Length = 314
Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 175/289 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PF IGTR SPLALA A ETR+ LM +P I+ + GD I +R L +IGGKGLF
Sbjct: 11 PFNIGTRGSPLALAQAHETRARLMAAFDLPQDAFAIVVIKVMGDAIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S TA+ L DL
Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPVEQPSGLLLDTYLPREDVRDAFVSLTARGLDDLEHG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR++ LL R D++V++FRG ++TRL KL N A A LA AG+ RL V
Sbjct: 131 ATVGTSSLRRRSQLLVRRPDLNVVEFRGNVQTRLMKLGNGVAEATFLAMAGLNRLNMTDV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QGAI IE ++ +A +++ I+H T + ER+FLA LDGSC
Sbjct: 191 PRTAIAPEDMLPAIAQGAIGIERRADDSRAAAMLEAIHHGPTGQRLAAERSFLAHLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
++ I G A G TL G +L +DG G D ++GR+ A
Sbjct: 251 QTPIGGLADLDGGTLRLRGEILRTDGSQVLADDMIGAIADGADMGREMA 299
>gi|163733941|ref|ZP_02141383.1| porphobilinogen deaminase [Roseobacter litoralis Och 149]
gi|161393052|gb|EDQ17379.1| porphobilinogen deaminase [Roseobacter litoralis Och 149]
Length = 314
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 181/303 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLA+A AFETR+ LM +P I+ + GD I +R L +IGGKGLF
Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPEDAFSIVVIKVTGDMIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD F+S T + DLA
Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLVLDTYLPREDVRDAFVSPTLSGIADLAQG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V
Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLASAGLNRLKMDEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ ++ P+ QGAI IE + + +L+ I+H +T + ER+FL LDGSC
Sbjct: 191 PATPIEADEMLPAVAQGAIGIERRMADQNTADLLSAIHHIETGQRLTAERSFLLTLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G L G VL DG R+G D +GR AQ + +
Sbjct: 251 ETPIAGLAELDGDQLRLRGEVLRPDGSESLAGERSGPIADGAEMGRILAQELLDRAGPKF 310
Query: 305 FNF 307
F +
Sbjct: 311 FEW 313
>gi|159045244|ref|YP_001534038.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12]
gi|157913004|gb|ABV94437.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12]
Length = 347
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR S LALA A ETR+ L +P I+ + T GDRI +R+L+EIGGKGLF
Sbjct: 40 PLKIGTRGSLLALAQAHETRARLSAAFDLPEEAFEIVVIKTTGDRIQDRSLSEIGGKGLF 99
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE ++ G ID AVHS KDMP GL + YLPRED+RD F++ +L DL
Sbjct: 100 TREIEDAMLDGSIDIAVHSMKDMPVDTPAGLALDTYLPREDVRDAFVTLDGGTLADLPEG 159
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+G+SSLRR+A L R D+ +++FRG ++TR+ KL + AHA LA AG+ RL ++V
Sbjct: 160 AVVGSSSLRRRAQLAHRRPDLQLVEFRGNVQTRMKKLGDGVAHATFLAMAGLNRLGMDEV 219
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QG I IE ++P+A E++ I+ + + CERA+L+ LDGSC
Sbjct: 220 PRSAIAPEDMLPAVAQGCIGIERRADDPRAAEMLAAIHDGPSGHRLACERAYLSALDGSC 279
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G +++ +L DG S DA +GR+ A+ +R +
Sbjct: 280 QTPIAGLAELDGGSIHLRAEILRPDGSEVLSDSETAPVEDAAKMGREVAERLRARAPDGF 339
Query: 305 FNF 307
F++
Sbjct: 340 FSW 342
>gi|255262067|ref|ZP_05341409.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
gi|255104402|gb|EET47076.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
Length = 326
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 180/305 (59%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P IGTR SPLALA A+ETR+ L +P I+ + T GDRI +R L EIGGKG
Sbjct: 21 QSPLNIGTRGSPLALAQAYETRARLSAAFDLPSEAFTIVVIKTTGDRIIDRPLKEIGGKG 80
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE ++ G+ID AVHS KDMP GL I YLPRED RD FI+ LKDLA
Sbjct: 81 LFTREIEDAMLQGDIDIAVHSMKDMPVLQPDGLLIDTYLPREDNRDAFIALDGSGLKDLA 140
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR A L+ R D+++++FRG ++TRL KL + A A LA AG+ RLK +
Sbjct: 141 EGATVGTSSLRRHAQLMNRRPDLNIVEFRGNLQTRLKKLGDGVAEATFLAMAGLNRLKMD 200
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + + +D P+ QGAI IE ++ + E+++ I+ T + ERAFL LDG
Sbjct: 201 DVPRTAIETDDMLPAVAQGAIGIERRADDSRMAEMLEAIHDGPTGQRLAAERAFLKALDG 260
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G LY G VL DG + +G D +GR A + + +
Sbjct: 261 SCETPIAGLAELNGGILYLRGEVLRVDGSDTVYDAASGPIEDGAEMGRVMAAKLLAEAGE 320
Query: 303 NVFNF 307
F++
Sbjct: 321 GFFDW 325
>gi|110678608|ref|YP_681615.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114]
gi|109454724|gb|ABG30929.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114]
Length = 314
Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 182/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLA+A AFETR+ LM +P + I+ + GD I +R L +IGGKGLF
Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPENAFTIVVIKVTGDMIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD FIS T + + DLA
Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLILDTYLPREDVRDAFISPTLKGIADLAQG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V
Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLACAGLSRLKMDEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + P+ QGAI IE + + EL+ I+ T + ER FL LDGSC
Sbjct: 191 PATPIETDHMLPAVAQGAIGIERRIADTNTAELLSAIHDGPTGQRLAAERNFLLTLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G L G VL DG R+G D +GRD A+ + + +
Sbjct: 251 ETPIAGLAELSGDHLRLRGEVLRPDGSEALNGERSGPISDGAAMGRDLAEKLLKRAGPSF 310
Query: 305 FNF 307
F++
Sbjct: 311 FDW 313
>gi|332559141|ref|ZP_08413463.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N]
gi|332276853|gb|EGJ22168.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N]
Length = 310
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 185/304 (60%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL
Sbjct: 6 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 66 FTREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFADGGLADLPQ 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK ++
Sbjct: 126 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDE 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGS
Sbjct: 186 VPRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVRTGHRLAAERSFLLKLDGS 245
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 246 CETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPAD 305
Query: 304 VFNF 307
F++
Sbjct: 306 FFSW 309
>gi|221640136|ref|YP_002526398.1| porphobilinogen deaminase [Rhodobacter sphaeroides KD131]
gi|221160917|gb|ACM01897.1| Porphobilinogen deaminase [Rhodobacter sphaeroides KD131]
Length = 310
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 184/304 (60%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL
Sbjct: 6 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 66 FTREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQ 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +
Sbjct: 126 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNE 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGS
Sbjct: 186 VPRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGS 245
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 246 CETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPAD 305
Query: 304 VFNF 307
F++
Sbjct: 306 FFSW 309
>gi|149204076|ref|ZP_01881044.1| porphobilinogen deaminase [Roseovarius sp. TM1035]
gi|149142518|gb|EDM30563.1| porphobilinogen deaminase [Roseovarius sp. TM1035]
Length = 315
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 184/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEAFEIVVIKTTGDQIIDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ +++G+ID AVHS KDMP +GL + YLPRED+RD F+S T SL DL
Sbjct: 71 TREIEQAMLTGDIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPTVASLADLPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V
Sbjct: 131 SLVGTSSLRRKAQVLVAYPHLEVVEFRGNVQTRLKKLEDGVAACTFLAMAGLNRLGRSEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC
Sbjct: 191 ATCAIDADVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A GSTL G +L DG ++ D +GR A + +
Sbjct: 251 ETPIAGLAELNGSTLRLRGEILRPDGSESLTDDQSAPIEDGAELGRAMAAKLLAQAGPGF 310
Query: 305 FNF 307
F++
Sbjct: 311 FDW 313
>gi|77464252|ref|YP_353756.1| porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1]
gi|77388670|gb|ABA79855.1| Porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1]
Length = 314
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 184/304 (60%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL
Sbjct: 10 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 70 FTREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQ 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +
Sbjct: 130 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNE 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGS
Sbjct: 190 VPRVPIESEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 250 CETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPAD 309
Query: 304 VFNF 307
F++
Sbjct: 310 FFSW 313
>gi|126463094|ref|YP_001044208.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029]
gi|126104758|gb|ABN77436.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029]
Length = 322
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 184/304 (60%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL
Sbjct: 18 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 77
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 78 FTREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQ 137
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +
Sbjct: 138 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNE 197
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGS
Sbjct: 198 VPRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGS 257
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 258 CETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGVELASELLGRAPAD 317
Query: 304 VFNF 307
F++
Sbjct: 318 FFSW 321
>gi|85713686|ref|ZP_01044676.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A]
gi|85699590|gb|EAQ37457.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A]
Length = 316
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 177/272 (65%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+E
Sbjct: 13 IGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTKE 72
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL S++
Sbjct: 73 IEEALLAGAIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPRAASLHDLPAGSIV 132
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+A++LR R D+ V RG +ETRL K++ +A A LLA AG+ RL +
Sbjct: 133 GTASLRRQAMVLRLRPDLKVNALRGNVETRLRKIDAGEADATLLALAGLNRLGLQDKATR 192
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
IL E+F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 193 ILETEEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRTP 252
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
I G G ++F G++++ DG +E +R
Sbjct: 253 IGGHCRVNGDRIHFRGLIISPDGTESYETTRE 284
>gi|300024951|ref|YP_003757562.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526772|gb|ADJ25241.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888]
Length = 310
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/296 (46%), Positives = 181/296 (61%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RIGTR SPLALA A E R L H + I I + T GDR+T+R L++IGG
Sbjct: 1 MQAARIRIGTRGSPLALAQAHEVRDRLAKAHGLSEDAISITIIKTTGDRVTDRPLSDIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE L + EID AVHS KDM T+L GL + A LPRED RD FIS ++
Sbjct: 61 KGLFTKEIEDALFAREIDIAVHSMKDMQTELPDGLALGAVLPREDPRDAFISLKHANISA 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRRK+ +L R D+SVIDFRG +ETRL KL + A A LA AG+ RL
Sbjct: 121 LPTGAIVGTSSLRRKSQVLSIRPDLSVIDFRGNVETRLRKLKDGIAEATFLAVAGLNRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I I+ D P+ QGAI +E + +A+ V +N ++ +V ERAFLA L
Sbjct: 181 LSDRITAIVPSADMLPAAAQGAIGLEIRTGDKEAEAFVAPLNDVNSQRAVTAERAFLARL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+GSC++ IA A G L F G VL+ DG+ ++VSR+G + +IG AA +
Sbjct: 241 EGSCRTPIAAHATIDGEQLSFRGQVLSLDGQQKYDVSRSGAANASRDIGLAAADEV 296
>gi|260425851|ref|ZP_05779830.1| porphobilinogen deaminase [Citreicella sp. SE45]
gi|260420343|gb|EEX13594.1| porphobilinogen deaminase [Citreicella sp. SE45]
Length = 319
Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 184/308 (59%), Gaps = 4/308 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIG 59
+P RIGTR SPLALA A ETR L D + P I+ + T GD +R L EIG
Sbjct: 10 QPLRIGTRGSPLALAQAHETRDRLCDTFALSPEAFEIVVIRTTGDDRSMIAADRPLKEIG 69
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KGLFT+EIE++L++G ID AVHS KDMPT +GL + YLPRED+RD FIS L
Sbjct: 70 NKGLFTKEIEEQLMTGGIDIAVHSMKDMPTLQPEGLMLDCYLPREDVRDAFISPGHGGLG 129
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG+ R+
Sbjct: 130 DLPAGTVVGTSSLRRRAQLLNRRPDLRVVEFRGNLQTRLKKLEDGVAAATFLAMAGLNRM 189
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ ++ ++ P+ QGAI IE ++ +A E++ I+ DT + ERAFLAE
Sbjct: 190 GMTQLPMTAMSPDEMLPAVAQGAIGIERRSDDSRAAEMLAAIHDRDTALRLGAERAFLAE 249
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IAG A G+ L G +LA DG H G + +GR AQ +
Sbjct: 250 LDGSCETPIAGLAELDGTALRLRGELLAPDGSASHAGEIAGPADNGPELGRLLAQQLLAR 309
Query: 300 SNKNVFNF 307
+ + F +
Sbjct: 310 AGADFFAW 317
>gi|146276603|ref|YP_001166762.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025]
gi|145554844|gb|ABP69457.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025]
Length = 322
Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 184/304 (60%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL
Sbjct: 18 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 77
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE+ L+ G ID AVHS KDMPT +GL + YLPRED RD FI++ L DL
Sbjct: 78 FTREIEEALLDGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITYAEGGLADLPQ 137
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +
Sbjct: 138 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDD 197
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + + E+ + QGAI IE +++P+ QE++ I+ T + ER+FL +LDGS
Sbjct: 198 VPRVAIEPEEMLSAVAQGAIGIERRIDDPRTQEMLAAIHDVPTGHRLAAERSFLLKLDGS 257
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A +G ++ G +L DG G DA +G + A + + +
Sbjct: 258 CETPIAGLAVLEGDQIWLRGEILRPDGSESISGEIRGGIPDAAALGAELASELLGRAPSD 317
Query: 304 VFNF 307
F++
Sbjct: 318 FFSW 321
>gi|85705298|ref|ZP_01036397.1| porphobilinogen deaminase [Roseovarius sp. 217]
gi|85670171|gb|EAQ25033.1| porphobilinogen deaminase [Roseovarius sp. 217]
Length = 315
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 184/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEVFEIVVIKTTGDQIIDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L++GEID AVHS KDMP +GL + YLPRED+RD F+S SL DL
Sbjct: 71 TREIEQALLTGEIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPLVGSLADLPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V
Sbjct: 131 ALVGTSSLRRKAQVLVAYPHLQVVEFRGNVQTRLKKLADGVATCTFLAMAGLNRLGRSEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ E P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC
Sbjct: 191 ATGAIDPEVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G+TL G +L DG ++ D ++GR A + +
Sbjct: 251 ETPIAGLAELNGNTLRLRGEILRPDGSESLTDDQSAPIEDGADLGRAMAAKLLAQAGPGF 310
Query: 305 FNF 307
F++
Sbjct: 311 FDW 313
>gi|254466587|ref|ZP_05079998.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I]
gi|206687495|gb|EDZ47977.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I]
Length = 323
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 183/310 (59%), Gaps = 10/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A+ETRS L +P I+ + T GD ++ L E+GG
Sbjct: 15 PLKIGTRGSPLALAQAYETRSRLAAAFDLPQEAFEIVVIRTTGDNQALIAADKPLKELGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD FIS +SL D
Sbjct: 75 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLALDTYLPREDVRDAFISPALKSLHD 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL+ A LA AG+ RL
Sbjct: 135 LAEGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVADCTFLAMAGLNRLA 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ +A E++ I+ +T + ERAFLA L
Sbjct: 195 MADVPANPIETSDMLPAVAQGAIGIERRADDGRAAEMLAAIHDGETGLRLAAERAFLAAL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297
DGSC++ IAG A GSTL G VL DG E + C D +GR+ A +
Sbjct: 255 DGSCETPIAGLAELHGSTLRLRGEVLRPDG---SESISDDQTCPVEDGAELGREMAAKLL 311
Query: 298 FISNKNVFNF 307
+ K F++
Sbjct: 312 EKAGKGFFDW 321
>gi|126732359|ref|ZP_01748159.1| porphobilinogen deaminase [Sagittula stellata E-37]
gi|126707228|gb|EBA06294.1| porphobilinogen deaminase [Sagittula stellata E-37]
Length = 316
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/307 (44%), Positives = 185/307 (60%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA AFETR LM +P I + T GD +R L EIG
Sbjct: 9 PLKIGTRGSPLALAQAFETRERLMAAFSLPEDAFEICIIKTTGDDRAMIAADRPLKEIGN 68
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L++G ID AVHS KDMPT+ +GL + YLPRED RD FI H S+ D
Sbjct: 69 KGLFTKEIEEALVAGRIDIAVHSMKDMPTEQPEGLILDCYLPREDPRDAFICHDHGSIHD 128
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +V+G+SSLRR+A LL R D+ V++FRG ++TRL KL++ A A LA AG+ R+K
Sbjct: 129 LPVGAVVGSSSLRRRAQLLHRRPDLDVVEFRGNLQTRLKKLSDGVATATFLACAGLNRMK 188
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE +++ QE++ I+ DT + ERAFLA L
Sbjct: 189 IPGVPMFPIAEVDMLPAIAQGAIGIERRIDDATTQEMLAAIHDHDTGLRLAAERAFLARL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+TL+ G +L DG I H +G + +GR A + +
Sbjct: 249 DGSCETPIAGLAELDGATLHLRGEILRPDGSISHAGEISGAATEGAALGRTLADDLLSRA 308
Query: 301 NKNVFNF 307
+ F++
Sbjct: 309 GEGFFDW 315
>gi|302838564|ref|XP_002950840.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f.
nagariensis]
gi|300263957|gb|EFJ48155.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f.
nagariensis]
Length = 355
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 196/312 (62%), Gaps = 11/312 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIG 59
K +IGTR SPLALA A+ TR L P N + I+ + T GD+I N+ L +IG
Sbjct: 47 KTVKIGTRGSPLALAQAYLTRDLLK--KNFPELNEEGALEIVIIKTTGDKILNQPLADIG 104
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+EI+ L+ G+ID AVHS KD+PT L +G + LPRED+RDVFIS TA+ L
Sbjct: 105 GKGLFTKEIDDALLGGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPTAKDLS 164
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 165 ELPAGAVVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRL 224
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +IL+IE+ P+ QGAI I + +++L+ +NHE+T +V CERAFLA
Sbjct: 225 DMTAHITKILSIEEMLPAVSQGAIGIACRTQDDASRKLLAALNHEETRIAVVCERAFLAA 284
Query: 240 LDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQY 295
LDGSC++ IAG+A+ KGS L+F G+V DGK SR + DA+ G DA +
Sbjct: 285 LDGSCRTPIAGYAH-KGSDGQLHFSGLVATPDGKQMMRTSRVASFTDADAVKAGEDAGRE 343
Query: 296 IRFISNKNVFNF 307
++ K +F +
Sbjct: 344 LKATGPKELFMY 355
>gi|323136449|ref|ZP_08071531.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242]
gi|322398523|gb|EFY01043.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242]
Length = 308
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 178/296 (60%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR SPLALA R++L H + + I + T GD+I +R L+E GG
Sbjct: 1 MTVRSLRIGTRGSPLALAQTHMIRAALAQAHGVAEDHFAIEIIKTTGDQIQDRPLSESGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E++ LI+G+ID AVHS+KD+PT L + I+ YLPRED RD +I +L
Sbjct: 61 KGLFTKELDSALIAGDIDLAVHSSKDLPTHLPAEIVIAGYLPREDARDAWIGRNGVTLDQ 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR A + R R D+ RG + TRLNK+ + A LLA AG+KRL
Sbjct: 121 LPAGAVVGTASLRRAAQVKRLRPDVQTTLLRGNVHTRLNKVERGEIDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+L ++DFPP+ GQGAI I + N+P+ + + + E T ++ ERAFLA L
Sbjct: 181 LADRATALLPLDDFPPAVGQGAIGITSRANDPETRAALAPLLDEATALALLAERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
DGSC++ IAG A K L FYG VL +DG V R+G DA IG DA I
Sbjct: 241 DGSCRTPIAGHATVKDGDLTFYGEVLKADGSEVWIVRRHGRAIDAAMIGADAGNEI 296
>gi|75674669|ref|YP_317090.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255]
gi|123745784|sp|Q3SVF3|HEM3_NITWN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|74419539|gb|ABA03738.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255]
Length = 316
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 176/272 (64%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+E
Sbjct: 13 IGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTKE 72
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL + +
Sbjct: 73 IEEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGATV 132
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+A++L+ R D+ V RG +ETRL K++ +A A LLA AG+ RL +
Sbjct: 133 GTASLRRQAMVLKLRPDLKVNSLRGNVETRLRKISVGEADATLLALAGLNRLGLQDKATR 192
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 193 ILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDPETEVALSAERSFLALLDGSCRTP 252
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
I G G + F G++++ DG F+E +R
Sbjct: 253 IGGHCRVNGDRIDFRGLIISPDGTEFYETTRE 284
>gi|92116183|ref|YP_575912.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14]
gi|123387219|sp|Q1QQP5|HEM3_NITHX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91799077|gb|ABE61452.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14]
Length = 316
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/272 (46%), Positives = 175/272 (64%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LALA A E R L H++ P IVI + T GD I +R L ++GGKGLFT+E
Sbjct: 13 IGTRGSALALAQANEVRDRLARAHQVAPERIVIKTIRTSGDAIQDRPLFDVGGKGLFTKE 72
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L++G ID AVHS+KD+PT L + A+LPRED+RD FIS A SL DL S++
Sbjct: 73 IEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSIV 132
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+A++LR R D+ V RG +ETRL KL +A A LLA AG+ RL +
Sbjct: 133 GTASLRRQAMVLRLRPDLKVSVIRGNVETRLRKLVAGEADATLLALAGLNRLGLQDRATR 192
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 193 ILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRTP 252
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
I G G ++F G++++ DG +E +R
Sbjct: 253 IGGHCRVNGDRIHFRGLIISPDGTQSYETTRE 284
>gi|254474607|ref|ZP_05087993.1| porphobilinogen deaminase [Ruegeria sp. R11]
gi|214028850|gb|EEB69685.1| porphobilinogen deaminase [Ruegeria sp. R11]
Length = 320
Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 183/310 (59%), Gaps = 10/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAYETRARLAAAFDLPDDAFEIVVIKTTGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP + GL + YLPRED+RD FIS + S+ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVQQPDGLVLDTYLPREDVRDAFISPSLTSIHD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A LL R D++V+ FRG ++TRL KL+ A LA AG+ RL
Sbjct: 132 LAKGAVVGTSSLRRRAQLLHRRPDLNVVQFRGNVQTRLRKLSEGVAECTFLAMAGLNRLA 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ +A +++ I+ + T + ERAFLA L
Sbjct: 192 MADVPANAIETNDMLPAVAQGAIGIERRTSDNRAADMLAAIHDQQTGQRLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297
DGSC++ IAG A G+TL G VL DG E + RC D +GR A +
Sbjct: 252 DGSCETPIAGLAELDGTTLRLRGEVLRPDGS---EAISDDQRCPIEDGAELGRAMAAKLL 308
Query: 298 FISNKNVFNF 307
+ + F++
Sbjct: 309 DQAGEGFFDW 318
>gi|126725997|ref|ZP_01741839.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150]
gi|126705201|gb|EBA04292.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150]
Length = 313
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/291 (43%), Positives = 177/291 (60%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P +IGTR SPLALA A ETR L H + P I+ + T GD + +R L EIGGKG
Sbjct: 7 QSPLKIGTRGSPLALAQAHETRDRLSKAHNLAPEAFEIVVIKTTGDIVQDRPLKEIGGKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE+ ++SG+ID AVHS KDMP + GL I+ YLPRED+RD F+S +A S DL
Sbjct: 67 LFTKEIEEAMLSGDIDIAVHSMKDMPVEQPDGLAITCYLPREDVRDAFVSLSADSFDDLR 126
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL
Sbjct: 127 QGATVGSSSLRRRAQLAHRRPDLNLVEFRGNVQTRMRKLGDGVADATFLAMAGLIRLGMS 186
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + L + F P+ QGAI IE + + E++ I+ + T D + ERAFLA ++G
Sbjct: 187 DVARLPLETDVFLPAVAQGAIGIEQRIGDSVISEMLTAIHDQHTGDLLAAERAFLARVEG 246
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
SC++ IAG A L+F +L DG + +G D IGR A
Sbjct: 247 SCQTPIAGLAEIIDGKLHFRAEILRPDGSEAITGAASGEIADGAAIGRQVA 297
>gi|323451650|gb|EGB07526.1| hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens]
Length = 333
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 190/312 (60%), Gaps = 7/312 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----NIVIIPLSTKGDRITNRTL 55
+E P RIGTR SPLALA A+ TR LM P I + + T+GD I ++ L
Sbjct: 15 LEATPLRIGTRGSPLALAQAYMTRELLM--KNFPEELGGEGAIQLCIMKTQGDMILDKAL 72
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
+EIGGKGLFT+E++ L+ E+D VHS KD+PT L + L RED RDVFIS TA
Sbjct: 73 SEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPAKTVLPCMLEREDTRDVFISPTA 132
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+SLKDL SVIG++SLRR++ +L + ++FRG ++TRL KL+ A LLAYAG
Sbjct: 133 KSLKDLKDGSVIGSASLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAG 192
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KR+ + +L ++ P+ QGAI I+ ++ +A + + +NHE+T+ V+CERA
Sbjct: 193 LKRMDMADEVTAVLEWDEMLPAVAQGAIGIQCRDDDARALKYIAALNHEETFTCVSCERA 252
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
FLA LDG+CK+ IAG A L F G+V + DG+ + ++ G DA IGR+A +
Sbjct: 253 FLAALDGNCKTPIAGQARIVDGELLFDGLVSSLDGQQMYRATKTGAPADAEKIGREAGEG 312
Query: 296 IRFISNKNVFNF 307
I+ + F +
Sbjct: 313 IKAEAGIEFFEW 324
>gi|2495180|sp|Q43082|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|313724|emb|CAA51820.1| hydroxymethylbilane synthase [Pisum sativum]
Length = 369
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/307 (46%), Positives = 190/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 62 IRIGTRGSPLALAQAHETRDKLMASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPA 181
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ +L ++V D FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 182 GSVIGTASLRRKSQILHRYPSLTVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMT 241
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + L+I+D P+ QGAI I N+ K E + +NHE+T +++CERAFL LDG
Sbjct: 242 ENVTSTLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDG 301
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299
SC++ IAG+A K F G+V + DG E SR G+ D + IG+DA + +
Sbjct: 302 SCRTPIAGYASRDKDGNCLFRGLVASPDGTRVLETSRIGSYTYEDMMKIGKDAGEELLSR 361
Query: 300 SNKNVFN 306
+ FN
Sbjct: 362 AGPGFFN 368
>gi|83952840|ref|ZP_00961570.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM]
gi|83835975|gb|EAP75274.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM]
Length = 304
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 183/302 (60%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLALA A+ETR L+ +P I+ ++T GDR+ +R L EIGGKGLFT
Sbjct: 1 MKIGTRGSPLALAQAYETRDRLVAAFDLPETAFEIVIITTTGDRVIDRPLKEIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE L++G+ID AVHS KDMP +GL I YLPRED+RD FI T ++L ++A +
Sbjct: 61 REIEDALLTGDIDLAVHSMKDMPVLQPEGLIIDCYLPREDVRDAFICPTGRNLSEMAPGT 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+A +L + V++FRG ++TRL KL+ A LA AG+ RLK+ +VI
Sbjct: 121 KVGSSSLRRRAQVLVAHPQLEVVEFRGNVQTRLRKLDEGVAACTFLAMAGLNRLKRTEVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L E+ P+ QGAI IE ++ A +++ I+H T + ERAFLA LDGSC+
Sbjct: 181 TRALEPEEMLPAVAQGAIGIERRRDDSGAAMMLEAIHHGPTGQRLAAERAFLAALDGSCE 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G TL G +L DG R+ D +GR A + + + F
Sbjct: 241 TPIAGLAELQGGTLRLRGEILRPDGSERLCDDRSAPVEDGAELGRAMAVDLLAQAGPDFF 300
Query: 306 NF 307
++
Sbjct: 301 DW 302
>gi|255558669|ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis]
gi|223540457|gb|EEF42025.1| porphobilinogen deaminase, putative [Ricinus communis]
Length = 372
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I + L +IGGKGL
Sbjct: 65 IRIGTRGSPLALAQAHETRDKLMAKHSELAEEGAIQIVIIKTTGDKILTQPLADIGGKGL 124
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+GEID AVHS KD+PT L + + LPRED+RD FIS +A SL +L
Sbjct: 125 FTKEIDEALINGEIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSASSLAELPS 184
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ +L +SV++ FRG ++TRL KLN A LLA AG+KRL
Sbjct: 185 GSVIGTASLRRKSQILHRYPSLSVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 244
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L+I+D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG
Sbjct: 245 ENVTSVLSIDDMLPAVAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDG 304
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 305 SCRTPIAGYASKDENGDCIFKGLVASPDGTRVLETSRKGPYALDDMIMMGKDAGKELLLQ 364
Query: 300 SNKNVFN 306
+ F+
Sbjct: 365 AGPGFFD 371
>gi|126733455|ref|ZP_01749202.1| porphobilinogen deaminase [Roseobacter sp. CCS2]
gi|126716321|gb|EBA13185.1| porphobilinogen deaminase [Roseobacter sp. CCS2]
Length = 311
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 170/285 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PF IGTR SPLALA A ETRS LM +P I + GD I +R L EIGGKGLF
Sbjct: 11 PFNIGTRGSPLALAQAHETRSRLMAAFNLPEEAFAICVIKVTGDAIQDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+ G ID AVHS KDMP GL + YLPRED+RD F+S A SL DLA
Sbjct: 71 TREIEEALLDGSIDIAVHSMKDMPVDQPGGLLLDTYLPREDVRDAFVSLNASSLNDLAEG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR++ LL R D+++++FRG ++TRL KL + A A LA AG+ RL V
Sbjct: 131 ATVGTSSLRRRSQLLAKRPDLNIVEFRGNVQTRLKKLGDGVAEATFLAMAGLNRLHMTDV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QGAI IE ++ +A ++ I+ T + ER+FLA LDGSC
Sbjct: 191 PRTAVAPEDMLPAVAQGAIGIERRGDDSRAAAMLDAIHDHATGRRLAAERSFLAALDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
++ I G A G ++ G +L +DG +G+ D +G
Sbjct: 251 ETPIGGLAELDGGSIRLRGEILRTDGTEVFADDMSGSIEDGPAMG 295
>gi|148909210|gb|ABR17705.1| unknown [Picea sitchensis]
Length = 373
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 191/306 (62%), Gaps = 5/306 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGLF
Sbjct: 68 RIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGLF 127
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L
Sbjct: 128 TKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQAG 187
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL +
Sbjct: 188 SIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQH 247
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGSC
Sbjct: 248 VTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGSC 307
Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISN 301
++ IAG+A+ K F G++ + DG E SR G D +++G DA + ++ +
Sbjct: 308 RTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTHEDMVSMGVDAGKELKERAG 367
Query: 302 KNVFNF 307
F++
Sbjct: 368 PAFFDW 373
>gi|116793769|gb|ABK26871.1| unknown [Picea sitchensis]
Length = 373
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 191/306 (62%), Gaps = 5/306 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGLF
Sbjct: 68 RIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGLF 127
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L
Sbjct: 128 TKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQAG 187
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL +
Sbjct: 188 SIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQH 247
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGSC
Sbjct: 248 VTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGSC 307
Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISN 301
++ IAG+A+ K F G++ + DG E SR G D +++G DA + ++ +
Sbjct: 308 RTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTYEDMVSMGVDAGKELKERAG 367
Query: 302 KNVFNF 307
F++
Sbjct: 368 PAFFDW 373
>gi|99082369|ref|YP_614523.1| porphobilinogen deaminase [Ruegeria sp. TM1040]
gi|99038649|gb|ABF65261.1| porphobilinogen deaminase [Ruegeria sp. TM1040]
Length = 318
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/306 (43%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMPT +GL + YLPRED+RD F+S S+ D
Sbjct: 71 KGLFTKEIEEALLSGGIDIAVHSMKDMPTLQPEGLTLDCYLPREDVRDAFVSPGIHSIAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL N A A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLENGVASATFLAMAGLRRLD 190
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E V ++++D P+ QGAI IE ++ +++ I+H +T + ERAFLA
Sbjct: 191 MAEAVPATPISVDDMLPAVAQGAIGIERRSSDITTAAMLEAIHHAETSLRLAAERAFLAA 250
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IA A G T+ G +L DG ++G D +GR + +R
Sbjct: 251 LDGSCETPIAALADLSGGTIQLRGQILRPDGSEALSDEQDGAIEDGAELGRQMGETLRAR 310
Query: 300 SNKNVF 305
+ F
Sbjct: 311 AGAGFF 316
>gi|46201306|ref|ZP_00208053.1| COG0181: Porphobilinogen deaminase [Magnetospirillum
magnetotacticum MS-1]
Length = 315
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 181/304 (59%), Gaps = 2/304 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA ETR L I I + T GD I +R L EIGGKGL
Sbjct: 8 LRIGTRGSPLALAQTHETRDRLAAAWAPLGQEGAIDIEVIKTTGDLIQDRPLAEIGGKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+++ ++SG I AVHS KD+PT L G+ + LPRED+RD FIS A SL DL
Sbjct: 68 FTKELDEAMLSGRIHLAVHSMKDVPTLLPDGIVLPCILPREDVRDAFISLKAASLADLPQ 127
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR A +L R D+ V++FRG ++TRL KL+ A +LA AG++RL
Sbjct: 128 GAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLDEGVVDATMLAMAGLRRLGLAG 187
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ L+ +D P+ QGAI I ++ A + +N D++ V ERAFL LDGS
Sbjct: 188 HVTSALSEDDMLPAVAQGAIGITCRADDEAAHAFLAALNCPDSFVRVAAERAFLTRLDGS 247
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IA A G L F G++++ DG H SR+G+R DA +G+DAA+ + ++
Sbjct: 248 CRTPIAALAVLDGDHLSFRGLIVSPDGTAIHATSRSGSRSDAEAMGKDAAEELIKVAGPG 307
Query: 304 VFNF 307
F+
Sbjct: 308 FFDL 311
>gi|255640018|gb|ACU20300.1| unknown [Glycine max]
Length = 356
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/308 (46%), Positives = 189/308 (61%), Gaps = 8/308 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL
Sbjct: 49 IRIGTRGSPLALAQAYETRDKLMASHPDLAEEGAIEIVIIKTTGDKILTQPLADIGGKGL 108
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ L++ EID AVHS KD+PT L + LPRED+RD FIS TA SL DL
Sbjct: 109 FTKEIDEALLNSEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLADLPP 168
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ +L ++V + FRG ++TRL KLN A LLA AG+KRL
Sbjct: 169 ASVIGTASLRRKSQILHRYPSLNVQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMT 228
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I ++ K E + +NHE+T +V CERAFL LDG
Sbjct: 229 ENVTSILSIDDMLPAVAQGAIGIACRSDDDKMAEYIDSLNHEETRLAVVCERAFLQTLDG 288
Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRF 298
SC++ IAG+A C+ F G+V + DG E SR G D I +G+DA + +
Sbjct: 289 SCRTPIAGYA-CRNEDGNCLFRGLVASPDGTRVLETSRVGPYAVEDMIEMGKDAGKELLS 347
Query: 299 ISNKNVFN 306
+ N F+
Sbjct: 348 RAGPNFFS 355
>gi|310815397|ref|YP_003963361.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25]
gi|308754132|gb|ADO42061.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25]
Length = 314
Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 176/304 (57%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIGTR SPLALA A+ETR L +P I + GD + ++ L EIGGKGL
Sbjct: 10 QPLRIGTRGSPLALAQAYETRDRLAQAFALPHEAFQIEVIKVTGDMVQDKALREIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S +L D+
Sbjct: 70 FTREIEDALLDGSIDIAVHSMKDMPVEQPAGLLLDCYLPREDVRDAFVSLHGWTLADVPA 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
VIGTSSLRR+A +L R D++V++FRG ++TRL KL+ A A LA AG+ RL++
Sbjct: 130 GKVIGTSSLRRRAQILARRPDLTVVEFRGNVQTRLKKLDEGVADATFLAMAGLNRLQRGD 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + L +E P+ QGAI IE ++ + ++ VI+ T + ERAFLA LDGS
Sbjct: 190 VPLKALEVEQMLPAVAQGAIGIERRADDRIIEGMLAVIHDGPTGVRLAAERAFLAGLDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + IAG A G + G VL DG G DA IG + A+ +R ++ +
Sbjct: 250 CHTPIAGLAEIIGDQIRLRGEVLRPDGSEAICDDMRGAAVDAAQIGAEMARKLRGLAGEG 309
Query: 304 VFNF 307
F
Sbjct: 310 FFTL 313
>gi|168059289|ref|XP_001781636.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666950|gb|EDQ53592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 187/305 (61%), Gaps = 4/305 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGLF
Sbjct: 89 RIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALEIVIIKTTGDKILSQPLADIGGKGLF 148
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L
Sbjct: 149 TKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEG 208
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+G++SLRR++ LL + V++FRG ++TRL KL+ A LLA AG+KRL +
Sbjct: 209 SVVGSASLRRQSQLLHKYPHLKVVNFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEH 268
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ IL+ +D P+ QGAI I + K +E + +NHEDT +V CERAFLA+LDGSC
Sbjct: 269 VTTILDTDDMLPAIAQGAIGIACRTGDTKMEEYLSSLNHEDTRLAVACERAFLAKLDGSC 328
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFISNK 302
++ IAG A F G+V +DGK E SR G+ D I + +DA Q + +
Sbjct: 329 RTPIAGLAQRTDDGCSFRGLVATTDGKQVLETSRKGSFFYDDMIALAQDAGQELISRAGP 388
Query: 303 NVFNF 307
+ F +
Sbjct: 389 DFFEW 393
>gi|126740632|ref|ZP_01756319.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6]
gi|126718433|gb|EBA15148.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6]
Length = 319
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 180/310 (58%), Gaps = 10/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG
Sbjct: 11 PLKIGTRGSPLALAQAYETRARLAKAFDLPQEAFEIVVIKTTGDNQALIAADKPLKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D
Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVLQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 131 LAAGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLEDGVAECTFLAMAGLNRLA 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V + D P+ QGAI IE ++ + +++ I+ + T + ERAFLA L
Sbjct: 191 MESVPATAIETTDMLPAVAQGAIGIERRSDDSRVAAMLEAIHDKATGQRLAAERAFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297
DGSC++ IAG A G TL G VL DG E C D +GRD A +
Sbjct: 251 DGSCETPIAGLAELDGGTLRMRGEVLRPDG---SEAIAEDQSCAIEDGAALGRDMAAKLL 307
Query: 298 FISNKNVFNF 307
+ + F++
Sbjct: 308 DQAGPSFFDW 317
>gi|259417591|ref|ZP_05741510.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B]
gi|259346497|gb|EEW58311.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B]
Length = 318
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 184/310 (59%), Gaps = 11/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L SG ID AVHS KDMPT+ +GL + YLPRED+RD F+S +++ D
Sbjct: 71 KGLFTKEIEEALTSGGIDLAVHSMKDMPTEQPEGLMLDCYLPREDVRDAFVSPQIRAIAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLQDGVASATFLAMAGLRRLN 190
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E+V + ED P+ QGAI IE ++ A +++ I+H +T + ERAFLA
Sbjct: 191 MAEEVPATPIAPEDMLPAVAQGAIGIERRSDDTTAAAMLEAIHHAETSLRLAAERAFLAA 250
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYI 296
LDGSC++ IA A G TL G +L DG E + C D +GR + +
Sbjct: 251 LDGSCETPIAALADLSGGTLQLRGQILRPDGS---EALADQQSCAIEDGAELGRRMGEAL 307
Query: 297 RFISNKNVFN 306
R + + F+
Sbjct: 308 RARAGEGFFS 317
>gi|298707417|emb|CBJ30046.1| hydroxymethylbilane synthase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 373
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 189/292 (64%), Gaps = 2/292 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMD-VHKIPPHNIVIIP-LSTKGDRITNRTLTEIGGKGLFT 65
IGTR SPLALA A+ETR L + ++ V I + T GD I ++ LTEIGGKGLFT
Sbjct: 61 IGTRGSPLALAQAYETRKRLGEQFDELKEEGAVAIQVIKTSGDMILDKPLTEIGGKGLFT 120
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +L++ ++D VHS KD+PT ++ G + LPRED D FIS+ A ++ L S
Sbjct: 121 KELDVQLLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPDGS 180
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIG++SLRR+A LLR V++FRG ++TRL KL+ A LLA+AG+KRL+ +V
Sbjct: 181 VIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQVA 240
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+ + P+ QGAI I+ N+P ++ + + H++T +V+CERAFLA LDG+CK
Sbjct: 241 TSVLDQDAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGNCK 300
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ IAG A +G L F G++ + DGK F++ +R G DA+ +G DA ++
Sbjct: 301 TPIAGQARMEGEKLVFRGLIASPDGKQFYDTTREGKPEDAVAMGHDAGMELK 352
>gi|19849543|gb|AAL12220.1| porphobilinogen deaminase [Triticum aestivum]
Length = 308
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 188/305 (61%), Gaps = 5/305 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A +TR L H + I I+ + T GD I ++ L +IGGKGLF
Sbjct: 1 RIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIVIIKTTGDMILDKPLADIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L
Sbjct: 61 TKEIDDALLQGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVI ++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 121 SVIASASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLGMPET 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+L++++ P+ QGAI I N+ K E + +NHEDT +V CER FL+ LDG+C
Sbjct: 181 ATSVLSVDEMLPAVAQGAIGITCRSNDDKMMEYLSSLNHEDTRLAVACEREFLSVLDGNC 240
Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISN 301
++ IA +AY K F G++ + DG I +E SR+G D + +G+DA ++ +
Sbjct: 241 RTPIAAYAYRDKDGNCSFRGLLASPDGSIVYETSRSGTYSFDDMVALGQDAGHELKSKAG 300
Query: 302 KNVFN 306
F+
Sbjct: 301 PGFFD 305
>gi|89056336|ref|YP_511787.1| porphobilinogen deaminase [Jannaschia sp. CCS1]
gi|88865885|gb|ABD56762.1| porphobilinogen deaminase [Jannaschia sp. CCS1]
Length = 318
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 182/307 (59%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT----NRTLTEIGG 60
P RIGTR SPLALA A ETR+ LM +P I+ + T GD + + L E+GG
Sbjct: 11 PLRIGTRGSPLALAQARETRARLMAAWDLPEDAFEIVVIKTTGDDRSLIDADVALKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++ ID AVHS KDMPT GL + YLPRED+RD F+S L
Sbjct: 71 KGLFTKEIEEDMLTSSIDIAVHSMKDMPTVQPDGLMLDCYLPREDVRDAFVSVNHDGLHA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++G+SSLRR+A L R D++V++FRG ++TR+ KL A A LA AG++RL
Sbjct: 131 LPEGAIVGSSSLRRRAQLFARRPDLNVVEFRGNVQTRMKKLGGGVADATFLAMAGLRRLG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+V+K + +ED P+ QGAI IE V++ +A +++ I++ +T + ER+FL L
Sbjct: 191 MEEVVKSAIEVEDMLPAVAQGAIGIERRVSDTRAGDMLAAIHNTETGQRLAAERSFLKGL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IA A G TL G +L DG R D +G D A+ +R +
Sbjct: 251 DGSCQTPIAALAELDGGTLRLRGEILRPDGSEVLTDDRTAPIEDGAALGADMARDLRARA 310
Query: 301 NKNVFNF 307
F++
Sbjct: 311 GDGFFDW 317
>gi|84500376|ref|ZP_00998625.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597]
gi|84391329|gb|EAQ03661.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597]
Length = 315
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 177/304 (58%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A E R L +PP + + T GDR+ +R L EIGGKGL
Sbjct: 10 RPLKIGTRGSPLALAQAHEARDRLAHAFDLPPEAFEVCVIQTTGDRVQDRPLKEIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L++G ID AVHS KDMP +GL + YLPRED RD F+S+ + L +
Sbjct: 70 FTREIEHALLTGGIDIAVHSMKDMPVLQPEGLLLDCYLPREDPRDAFVSNLYERLDQIPA 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A +L R D+ V++FRG ++TRL KL + A A LA AG+ RL +
Sbjct: 130 GARVGTSSLRRRAQVLVRRPDLEVVEFRGNVQTRLRKLADGVASATFLAMAGLNRLDRAS 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + L ++ P+ QGAI IE ++ L++ I+ +T + ERAFLA LDGS
Sbjct: 190 IARSALATDEMLPAVAQGAIGIERREDDHATAALLEAIHDPETARQLAAERAFLAALDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A +G TL G +L DG + R+ D +GR+ + +
Sbjct: 250 CETPIAGLADLEGGTLRLRGEILRPDGSEALKDDRSAPVEDGAKLGREMGAALLAQAGDG 309
Query: 304 VFNF 307
F+F
Sbjct: 310 FFDF 313
>gi|296080867|emb|CBI18797.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 189/306 (61%), Gaps = 6/306 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGLF
Sbjct: 22 RIGTRGSPLALAQAYETRDKLMAAHSELAEEGAIQIVVIKTTGDKILTQPLADIGGKGLF 81
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI++ L++G+ID AVHS KD+PT L + LPRED+RD FIS TA SL +L
Sbjct: 82 TKEIDEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLSELPAG 141
Query: 125 SVIGTSSLRRKALLL-RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GT+SLRRK+ LL R++S + +FRG ++TRL KLN A LLA AG+KRL +
Sbjct: 142 SIVGTASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTE 201
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ IL+I++ P+ QGAI I N+ K + +NHE T +V CERAFL LDGS
Sbjct: 202 NVTSILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLNHEVTRLAVACERAFLETLDGS 261
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300
C++ IAG+A + + F G+V + DG E SR G D I +G+DA + + +
Sbjct: 262 CRTPIAGYASHDEDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSRA 321
Query: 301 NKNVFN 306
F+
Sbjct: 322 GPGFFD 327
>gi|254463278|ref|ZP_05076694.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2083]
gi|206679867|gb|EDZ44354.1| porphobilinogen deaminase [Rhodobacteraceae bacterium HTCC2083]
Length = 295
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 176/295 (59%), Gaps = 4/295 (1%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA A+ETR L +P VI + T GD+I +R L EIGGKGLFT EIE ++S
Sbjct: 1 MALAQAYETRRRLSGAFDLPEEAFVIKVIKTTGDKILDRPLKEIGGKGLFTREIEDDMLS 60
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
G ID AVHS KDMP +GL + YLPRED+RD F+S + L DL +V+GTSSLRR
Sbjct: 61 GAIDIAVHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSSGHERLADLPSGAVVGTSSLRR 120
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
+A LL +R D++V++FRG ++TRL KL + A LA AG++RL V K + E+
Sbjct: 121 RAQLLNYRPDLNVVEFRGNVQTRLKKLEDKVADCTFLAMAGLRRLDMAHVAKSAIETEEM 180
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+ QGAI IE +N+ A E++ I+ T + ERAFLA LDGSC++ IAG A
Sbjct: 181 LPAVAQGAIGIERRINDTNAAEMLAAIHDTQTGQRLAAERAFLAALDGSCETPIAGLAEL 240
Query: 255 KGSTLYFYGIVLASDG--KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
GS + F G VL DG I +VS G D + +G A + + + F +
Sbjct: 241 DGSNMRFRGQVLRPDGSESIGDDVS--GTIEDGVAMGEAMAAKLLAEAGEGFFEW 293
>gi|83855078|ref|ZP_00948608.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1]
gi|83842921|gb|EAP82088.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1]
Length = 317
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 177/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG
Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA
Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL +
Sbjct: 129 ESAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG
Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G TL+ G VL DG R+G +G D AQ + +
Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|163745168|ref|ZP_02152528.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45]
gi|161381986|gb|EDQ06395.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45]
Length = 315
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 179/304 (58%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P IGTR S LALA A E R L +P I+ + T GD+I +R L EIGGKGL
Sbjct: 10 RPLNIGTRGSLLALAQANEVRDRLAAAFDLPFEAFTIVVIKTTGDKIIDRPLKEIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L+ G ID AVHS KDMPT GL I YLPRED+RD FIS +S+ DL
Sbjct: 70 FTREIEAALLDGSIDIAVHSMKDMPTLQPGGLVIDTYLPREDMRDAFISPHLKSIADLPE 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A + R D+ V++FRG ++TRL KL + A A LA AG+ RLK ++
Sbjct: 130 GAVVGTSSLRRRAQVKLRRPDLEVVEFRGNLQTRLKKLEDGVAEATFLAMAGLNRLKMDE 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V K ++ +D P+ QGAI IE +++ +A +++ I+ T + + ERAFLA LDGS
Sbjct: 190 VPKAAVHTDDMLPAIAQGAIGIERRMDDTRAADMLAAIHDRATGEQLAAERAFLATLDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A G+ + G VL DG D GR+ A+ + +
Sbjct: 250 CETPIAGLAELNGTNMRLRGQVLRPDGSDAIGDDVTCTISDGAEAGREMARKLLAEAGPG 309
Query: 304 VFNF 307
F++
Sbjct: 310 FFDW 313
>gi|163737211|ref|ZP_02144629.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107]
gi|161389815|gb|EDQ14166.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107]
Length = 320
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 182/310 (58%), Gaps = 10/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L
Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297
DGSC++ IAG A +G TL G VL DG E + C D +GR+ A +
Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGS---EAISDEQTCPVEDGAELGREMAAKLL 308
Query: 298 FISNKNVFNF 307
+ F++
Sbjct: 309 AQAGAGFFDW 318
>gi|83941602|ref|ZP_00954064.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36]
gi|83847422|gb|EAP85297.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36]
Length = 317
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 177/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG
Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA
Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL +
Sbjct: 129 EGAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG
Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G TL+ G VL DG R+G +G D AQ + +
Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|163740378|ref|ZP_02147772.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10]
gi|161386236|gb|EDQ10611.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10]
Length = 320
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 182/310 (58%), Gaps = 10/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L
Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297
DGSC++ IAG A +G TL G VL DG E + C D +GR+ A +
Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGS---EAISDEQTCPVEDGAELGREMATKLL 308
Query: 298 FISNKNVFNF 307
+ F++
Sbjct: 309 AQAGAGFFDW 318
>gi|149915548|ref|ZP_01904074.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b]
gi|149810440|gb|EDM70283.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b]
Length = 304
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 177/302 (58%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR SPLALA A+ETRS L +PP I+ + T GDRI +R L EIGGKGLFT
Sbjct: 1 MKLGTRGSPLALAQAYETRSRLSAAFDLPPEAFEIVVIKTTGDRIIDRPLKEIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE+ ++SGEID A+HS KDMP +GL + YLPRED+RD F+S L DL +
Sbjct: 61 REIEEAMLSGEIDIAIHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSPHVGGLADLEPGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V
Sbjct: 121 KVGTSSLRRKAQVLVAYPHLDVVEFRGNVQTRLKKLQDGVAACTFLAMAGLNRLGRSEVA 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGAI IE ++ + E++ I+ T + ERAFLA LDGSC+
Sbjct: 181 TAAIETDEMLPAVAQGAIGIERRRDDTRTAEMLAAIHDTPTGQRLAAERAFLAALDGSCE 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A G TL G VL DG + ++ D +G + + + + F
Sbjct: 241 TPIAGLAELDGGTLRLRGQVLRPDGSEALDDDQSAPIEDGAKLGHEMGRKLLERAGPGFF 300
Query: 306 NF 307
++
Sbjct: 301 DW 302
>gi|114765839|ref|ZP_01444932.1| porphobilinogen deaminase [Pelagibaca bermudensis HTCC2601]
gi|114541838|gb|EAU44875.1| porphobilinogen deaminase [Roseovarius sp. HTCC2601]
Length = 319
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A ETR L +P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAHETRDRLAAAFDLPQDAFEIVVIKTTGDDRAMIAADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE++L+SG ID AVHS KDMPT+ +GL + YLPRED RD FIS L
Sbjct: 71 KGLFTKEIEEQLLSGGIDIAVHSMKDMPTEQPEGLVLDCYLPREDERDAFISPGHAGLAA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++R+
Sbjct: 131 LPEGTVVGTSSLRRRAQLLNRRPDLQVVEFRGNVQTRLKKLEDGVAAATFLAMAGLRRMD 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ +D P+ QGAI IE ++ + +++ I+ DT + ER FLA L
Sbjct: 191 MTDIPMTAMSPDDMLPAIAQGAIGIERRSDDSRTGDMLAAIHDTDTATRLAAERTFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G L G +LA DG H +G D +GR A+ + +
Sbjct: 251 DGSCETPIAGLAELDGDRLRLRGEILAPDGSASHAGELSGPAADGPAMGRALAEELLARA 310
Query: 301 NKNVFNF 307
+ F +
Sbjct: 311 GPDFFAW 317
>gi|89069761|ref|ZP_01157097.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516]
gi|89044707|gb|EAR50818.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516]
Length = 313
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 176/304 (57%), Gaps = 1/304 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A ETR L H +P ++ + T GDR+ +R L EIGGKGL
Sbjct: 9 RPLKIGTRGSPLALAQAHETRDRLAAAHGLPGEAFEVVVIRTTGDRVVDRPLKEIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EIE+ ++SG ID AVHS KDMP +GL + YLPRED RD F+S +K L
Sbjct: 69 FTKEIEEAMLSGAIDIAVHSMKDMPVAQPEGLVLDCYLPREDPRDAFVSLLHAGIKALPD 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRKA LL R D+ V++FRG ++TRL KL + A A LA AG+ RL +
Sbjct: 129 GATVGTSSLRRKAQLLHRRPDLHVVEFRGNVQTRLRKLESGVAVATFLAVAGLNRLGADD 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + + ED P+ QGAI IE ++ E++ I+ T + + ERAFLA LDGS
Sbjct: 189 VPQAPIAPEDMLPAVAQGAIGIERRASDEGLGEMLAAIHDRATGERLAAERAFLAALDGS 248
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C++ IAG A G L G +LA DG D +G D A+ + +
Sbjct: 249 CETPIAGLAELIGDGRLRLRGEILAHDGSRCLADEAEAQIADGAALGTDMARRLLAQAGP 308
Query: 303 NVFN 306
F+
Sbjct: 309 GFFD 312
>gi|84685204|ref|ZP_01013103.1| porphobilinogen deaminase [Maritimibacter alkaliphilus HTCC2654]
gi|84666936|gb|EAQ13407.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2654]
Length = 319
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 186/311 (59%), Gaps = 9/311 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIG 59
KP +IGTR SPLALA A+ETR L +P I+ + T GD +R L EIG
Sbjct: 10 KPLKIGTRGSPLALAQAYETRDRLAAAFDLPETAFEIVVIKTTGDDRAMIAADRPLKEIG 69
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KGLFT EIE +L++G ID AVHS KDMPT+ GL + YLPRED RD FIS +
Sbjct: 70 NKGLFTREIEDQLLNGGIDLAVHSMKDMPTEQPPGLTLDCYLPREDTRDAFISLGGGGIH 129
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
LA +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A A LA AGI RL
Sbjct: 130 GLAEGAVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLTKLRDGVAEATFLAMAGITRL 189
Query: 180 KK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++V + + ED P+ QGAI IE ++ ++++ I+H T + ER+FLA
Sbjct: 190 GMLDEVPHDAIAPEDMLPAIAQGAIGIERRSHDTNVADMLEAIHHGGTERRLAAERSFLA 249
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAAQYI 296
LDGSC++ IAG A G TL G +L +DG + E+S G D ++GR AQ +
Sbjct: 250 TLDGSCETPIAGLAEIDGGTLRLRGEILRTDGSEALADEIS--GAVEDGPDMGRALAQKL 307
Query: 297 RFISNKNVFNF 307
+ + F++
Sbjct: 308 LSRAGPDFFDW 318
>gi|224094087|ref|XP_002310073.1| predicted protein [Populus trichocarpa]
gi|222852976|gb|EEE90523.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHSDLAEEGAIQIVIIKTTGDKIQSQPLADIGGKGL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 175
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S+IGT+SLRRK+ +L +SV + FRG ++TRL KLN A LLA AG+KRL
Sbjct: 176 GSIIGTASLRRKSQILHRYPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL ++D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG
Sbjct: 236 ENVTSILPLDDMLPAVAQGAIGIACRSNDDKMVNYLASLNHEETRLAVACERAFLETLDG 295
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG+ E SR G D I +G+DA + +
Sbjct: 296 SCRTPIAGYARKDENGDCIFKGLVASPDGRRVLETSRKGPYAFDDMIAMGKDAGKELLSQ 355
Query: 300 SNKNVFN 306
+ F+
Sbjct: 356 AGPGFFD 362
>gi|312114941|ref|YP_004012537.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100]
gi|311220070|gb|ADP71438.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100]
Length = 313
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 192/307 (62%), Gaps = 6/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPLSTKGDRITNRTLTEIG 59
+ + RIGTR S LALA A E ++ L ++ ++ +VI T GD+I ++ L+ +G
Sbjct: 6 DARQIRIGTRGSALALAQATEVQNRLAAIYGDEVKFERVVI---KTTGDKILDKALSLVG 62
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+E+E+ L + +ID AVHS KD+ L GL+I+ LPRED+RD FIS A+SL
Sbjct: 63 GKGLFTKELEEALFADQIDIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAKSLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
D+ +VIGT+S+RR+A + R D+ + FRG +++RL KL + A A LLA AG+ RL
Sbjct: 123 DMPEGAVIGTASVRREAFIKNKRPDLKTVLFRGNVQSRLKKLEDGVADATLLASAGLNRL 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I + + +ED P+P QGAI IE N+ +EL+ ++ E T +++ ERAFL+E
Sbjct: 183 GLSDRITQHIPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAFLSE 242
Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDGSC++ IA A G + F G +L DG +E +R G+ DA +G+DAAQ +
Sbjct: 243 LDGSCRTPIAALARYDGHGRVSFKGAILTPDGARIYETTREGSANDAAAMGKDAAQELYA 302
Query: 299 ISNKNVF 305
K+VF
Sbjct: 303 RGGKDVF 309
>gi|255635113|gb|ACU17914.1| unknown [Glycine max]
Length = 350
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 188/297 (63%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 43 LRIGTRGSPLALAQAYETRDKLMASHAELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + LPRED+RD FIS +A SL DL
Sbjct: 103 FTKEIDEALINGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GT+SLRRK+ +L ++V + FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 163 GSIVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G
Sbjct: 223 ENVTSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 283 SCRTPIAGYASRNEDGNCLFRGLVASPDGIRVLETSRIGPYAFEDTIKMGKDAGEEL 339
>gi|159486921|ref|XP_001701485.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
gi|158271667|gb|EDO97482.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
Length = 349
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 195/312 (62%), Gaps = 11/312 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRS----SLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
K +IGTR SPLALA A+ TR S ++ + IVII T GD+I N+ L +IG
Sbjct: 41 KTVKIGTRGSPLALAQAYMTRDLLKKSFPELSEEGALEIVII--KTTGDKILNQPLADIG 98
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+EI+ L+SG+ID AVHS KD+PT L +G + LPRED+RDVFIS A+ L
Sbjct: 99 GKGLFTKEIDDALLSGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPVAKDLS 158
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 159 ELPAGAIVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRL 218
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + L+I++ P+ QGAI I ++ ++ L+ +NHE+T +V CERAFL
Sbjct: 219 DMTEHITKTLSIDEMLPAVSQGAIGIACRTDDGASRNLLAALNHEETRIAVVCERAFLTA 278
Query: 240 LDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSR--NGNRCDAINIGRDAAQY 295
LDGSC++ IAG+A+ KG+ L+F G+V DGK SR DA+ G +A +
Sbjct: 279 LDGSCRTPIAGYAH-KGADGMLHFSGLVATPDGKQIMRASRVVPFTEADAVKCGEEAGKE 337
Query: 296 IRFISNKNVFNF 307
++ K +F +
Sbjct: 338 LKANGPKELFMY 349
>gi|56698469|ref|YP_168844.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
gi|56680206|gb|AAV96872.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
Length = 319
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 188/307 (61%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT----NRTLTEIGG 60
P +IGTR SPLALA A+ETR L +P I+ +ST GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRHRLGAAFDLPEDAFEIVVISTTGDNRAMIEADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G+ID AVHS KDMP + GL + +LPRED+RD FIS +++D
Sbjct: 71 KGLFTKEIEEAMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L +V+GTSSLRRKA LL R D+ V++FRG ++TRL KL+ A LA AGI+RL
Sbjct: 131 LPLGAVVGTSSLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLN 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+V ++ +D P+ QGAI IE +++ +A E++ I+H +T + ERA LA L
Sbjct: 191 MAEVPATAISPDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+TL G VL DG + R+G+ D +G + A+ + +
Sbjct: 251 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAITLDRSGDVADGPALGTEMARELLAQA 310
Query: 301 NKNVFNF 307
F++
Sbjct: 311 GPGFFDW 317
>gi|298292774|ref|YP_003694713.1| porphobilinogen deaminase [Starkeya novella DSM 506]
gi|296929285|gb|ADH90094.1| porphobilinogen deaminase [Starkeya novella DSM 506]
Length = 309
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 176/300 (58%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLAL A R +L+ H P + + + T GD IT+R L+E GGKGLFT
Sbjct: 8 LRLGTRGSPLALWQAHAVRDALVKAHGWAPEAVEVQVIRTTGDAITDRALSEAGGKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ ID AVHSAKDM TKL GL + YLPR D+RD I SL DL +
Sbjct: 68 KELEEALLDRRIDLAVHSAKDMATKLPDGLHLVGYLPRADVRDALILREGSSLADLKPGA 127
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRR+A L R R D+ V RG + TRL+K+ + + LLA AG+ RL
Sbjct: 128 KVGTASLRREAQLRRLRPDLQVSLLRGNVHTRLSKVESGEFDGTLLALAGLTRLGMADKA 187
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L++ DF P+ GQGA+ IE+ + L+ + T ++ ERA+L ELDGSC+
Sbjct: 188 SALLDVADFLPAVGQGAVAIESRFGDIAVDALLVPVTCPATGLALRVERAYLGELDGSCR 247
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ I G A +G + F G+VL+ DG ++E+ R G A+ +G A Q +R + ++
Sbjct: 248 TPIGGLAEVQGEEIRFRGVVLSPDGSRYYEIVRYGPANRALELGLAAGQEMRAMVPADLL 307
>gi|86139102|ref|ZP_01057673.1| porphobilinogen deaminase [Roseobacter sp. MED193]
gi|85824333|gb|EAQ44537.1| porphobilinogen deaminase [Roseobacter sp. MED193]
Length = 319
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 176/310 (56%), Gaps = 10/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L + +P I+ + T GD ++ L E+GG
Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLAEAFDLPHEAFEIVVIKTSGDNQALIAADKPLKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D
Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KLN A LA AG+ RL
Sbjct: 131 LEPGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLNEGVAECTFLAMAGLNRLA 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ + +++ I+ T + ERAFLA L
Sbjct: 191 MADVPATAIETNDMLPAVAQGAIGIERRGDDSRTAAMLEAIHDVTTGKRLAAERAFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297
DGSC++ IAG A G TL G VL DG E C D +GR+ A +
Sbjct: 251 DGSCETPIAGLAELDGGTLRLRGEVLRPDG---SEALAEDQSCAIEDGGELGREMAAKLL 307
Query: 298 FISNKNVFNF 307
+ F++
Sbjct: 308 ATAGPGFFDW 317
>gi|255634492|gb|ACU17610.1| unknown [Glycine max]
Length = 350
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 187/297 (62%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+IGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 43 LKIGTRGSPLALAQAYETRDKLMASHPELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ D AVHS KD+PT L + LPRED+RD FIS +A SL DL
Sbjct: 103 FTKEIDEALINGDSDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L ++V + FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 163 GSVVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G
Sbjct: 223 ENVSSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296
SC + IAG+A + F G+V + DG E SR G+ D I +G+DA + +
Sbjct: 283 SCHTPIAGYASRNEDGNCLFRGLVASPDGTRVLETSRIGSYAFEDMIKMGKDAGEEL 339
>gi|83594897|ref|YP_428649.1| porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170]
gi|83577811|gb|ABC24362.1| Porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170]
Length = 321
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 177/313 (56%), Gaps = 7/313 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLSTKGDRITNRTLTEI 58
+EK RIGTR SPLALA + R L+ + P + I + T GD I +R L+E+
Sbjct: 5 IEKSKLRIGTRGSPLALAQTHQVRDLLIAANPDLGEPGAVTIEVIKTTGDAILDRPLSEL 64
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT EI+ +++G ID AVHS KD+PT L G+ + L RED+RD F+ L
Sbjct: 65 GGKGLFTREIDDAMLAGTIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAFLGRDHARL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL SV+GT+SLRR A +L R DI VI FRG ++TRL+KL +A A +LA AG+ R
Sbjct: 125 ADLPEGSVVGTASLRRGAQILAMRPDIKVISFRGNVQTRLDKLARGEADATMLAIAGLNR 184
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L +L I++ P+ QGA+ + + A + +NH T V ERAFL
Sbjct: 185 LGMADKASSVLEIDEMLPAVAQGAVGVTCRAGDETAHRWLAPLNHRATQLCVEIERAFLT 244
Query: 239 ELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
LDGSC++ I G A K T++F G+++ +DGK+ H+ +R G D I +G DA
Sbjct: 245 RLDGSCRTPIGGLARLKRVEDPSGTVFFRGMIIRTDGKVIHQTTREGLAADGIALGDDAG 304
Query: 294 QYIRFISNKNVFN 306
+ + F
Sbjct: 305 AELLAKAGPGFFQ 317
>gi|307103191|gb|EFN51453.1| hypothetical protein CHLNCDRAFT_33052 [Chlorella variabilis]
Length = 361
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 191/312 (61%), Gaps = 10/312 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIG 59
K +IGTR SPLALA A+ TR L P N + II + T GD+I N+ L++IG
Sbjct: 52 KTLKIGTRGSPLALAQAYLTRDLLKST--FPELNEEGALEIIIIKTTGDKILNQPLSDIG 109
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+EI+ L+ G ID AVHS KD+PT L G + LPRED+RDVFIS +S+
Sbjct: 110 GKGLFTKEIDDALLDGRIDIAVHSMKDVPTYLPAGTVLPCNLPREDVRDVFISAKYKSIA 169
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+G++SLRR+A +L + V++FRG ++TRL KL A LLA AG+KRL
Sbjct: 170 ELPEGAVVGSASLRRQAQILAKYPTLQVVNFRGNVQTRLRKLQEGACDATLLALAGLKRL 229
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
IL+ ++ P+ QGAI I + ++ + +NHE+T ++ CERAFLA
Sbjct: 230 GLADKATSILSTDEMLPAVAQGAIGIACREGDDRSAAALAALNHEETRLAIVCERAFLAA 289
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIR 297
LDGSC++ IAG+A+ L F G+V DGK +E +R G+ +A IG+DA ++
Sbjct: 290 LDGSCRTPIAGWAHKADGQLAFRGLVSTPDGKKMYETTRTGSLTEDEARAIGQDAGTELK 349
Query: 298 FISNKN--VFNF 307
+ ++ VF++
Sbjct: 350 QQAQQDGTVFDW 361
>gi|224081346|ref|XP_002306378.1| predicted protein [Populus trichocarpa]
gi|222855827|gb|EEE93374.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 188/306 (61%), Gaps = 6/306 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A ETR LM H + I I+ + T GD+I ++ L +IGGKGLF
Sbjct: 57 RIGTRGSPLALAQAHETRDKLMASHAELAEDGAIQIVIIKTTGDKILSQPLADIGGKGLF 116
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 117 TKEIDEALINGDIDIAVHSMKDVPTYLPEMTILPCNLPREDVRDAFISMSATSLADLPAG 176
Query: 125 SVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GT+SLRRK+ +L +SV + FRG ++TRL KLN A LLA AG+KRL +
Sbjct: 177 SIVGTASLRRKSQILHRFPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMTE 236
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ IL I+D P+ QGAI I ++ K + +NHE+T +V CERAFL LDGS
Sbjct: 237 NVTSILPIDDMLPAVAQGAIGIACRDSDDKMANYLASLNHEETRLAVACERAFLETLDGS 296
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300
C++ IAG+A + F G+V + DG + SR G D I +G+DA + + +
Sbjct: 297 CRTPIAGYARRDENGDCIFKGLVASPDGTRVLKTSRKGPYAFDDMIAMGKDAGKELLSQA 356
Query: 301 NKNVFN 306
F+
Sbjct: 357 GPGFFD 362
>gi|88770654|gb|ABD51930.1| chloroplast hydroxymethylbilane synthase [Guillardia theta]
Length = 346
Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 188/312 (60%), Gaps = 9/312 (2%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPH------NIVIIPLSTKGDRITNR 53
M +P ++GTR SPLALA A+ETR L ++ P + I ++T GD ++
Sbjct: 13 MSGEPVIKLGTRGSPLALAQAYETRRRLAEL--FPEELGEKGEKVSINIINTSGDMELSK 70
Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113
L+EIGGKGLFT+E++ L+ E+D VHS KD+PT L G + A LPRED RD FIS
Sbjct: 71 ALSEIGGKGLFTKELDVALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISP 130
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
QS +++ +VIG++SLRR+A + I ++FRG ++TRL KL++ A LLA
Sbjct: 131 KYQSFEEMPEGTVIGSASLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLAL 190
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+KR+ + ++L+ ++ P+ QGAI I+ ++ K + + +NH+DT V+CE
Sbjct: 191 AGLKRMNMADCVTKVLDWDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCE 250
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
R+FLA LDGSCK+ IAG A ++F G+V + DG R G+ D + IG+DA
Sbjct: 251 RSFLATLDGSCKTPIAGQARIIDGKIHFRGLVASPDGSKIFRAERVGDVSDYMKIGKDAG 310
Query: 294 QYIRFISNKNVF 305
+ IR + + F
Sbjct: 311 EEIRKEAGEQFF 322
>gi|255262497|ref|ZP_05341839.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
gi|255104832|gb|EET47506.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
Length = 316
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/267 (47%), Positives = 166/267 (62%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP +IGTR SPLALA A ETR L +P I + T GDRI +R L EIGGKGL
Sbjct: 10 KPLKIGTRGSPLALAQAHETRERLAAAFDLPHEAFAIQVIQTTGDRIIDRPLKEIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE+ ++ G ID AVHS KDMPT GL + YLPRED+RD FI+ +L DL
Sbjct: 70 FTREIEQAMLDGSIDIAVHSMKDMPTLQPDGLLLDTYLPREDVRDAFIALDGGTLADLPD 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
V+GTSSLRR+A L R D+ V++FRG ++TRL KL + A A LA AG+ RLK +
Sbjct: 130 GGVVGTSSLRRQAQLRLRRPDLQVVEFRGNLQTRLRKLGDKVADATFLAMAGLNRLKMDD 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + + +E+ P+ QGAI IE N+ +A +++ I+ T ++ ERAFL LDGS
Sbjct: 190 VTRTPIEVEEMLPAVAQGAIGIERRANDLRAADMLAAIHDRLTGQRLSAERAFLQALDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C++ IA A G+++ G VL DG
Sbjct: 250 CETPIAALAELDGTSMRLRGEVLRPDG 276
>gi|297810933|ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata]
gi|297319187|gb|EFH49609.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 184/297 (61%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL
Sbjct: 75 IRIGTRGSPLALAQAYETREKLKSKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA SL +L
Sbjct: 135 FTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAASLAELPA 194
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 195 GSVVGTASLRRKSQILHKYPALRVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG
Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296
SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 315 SCRTPIAGYAAKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQEL 371
>gi|119386338|ref|YP_917393.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222]
gi|166217779|sp|A1B853|HEM3_PARDP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119376933|gb|ABL71697.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222]
Length = 313
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 179/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LALA A ETR LM H + I+ + T GDR+ +R L EIGGKG
Sbjct: 8 QNPIRIGTRGSALALAQAHETRDRLMAAHGLAADAFRIVVIKTTGDRVLDRPLKEIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE L++ EID AVHS KDMPT +GL I YLPRED+RD F+S ++ +L
Sbjct: 68 LFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+G+SSLRR+A L R D+ +++FRG ++TRL KL + A A LA AG+ RL
Sbjct: 128 QGAVVGSSSLRRRAQLAARRPDLKLVEFRGNVQTRLKKLEDGVAVATFLAMAGLTRLGML 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + + ++ P+ QG I +E ++ + L+ I+ D+ V ERAFLA LDG
Sbjct: 188 HVARGAVEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRDSALRVTAERAFLARLDG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A +G L G +L DG R G D +G D A+ +R +
Sbjct: 248 SCQTPIAGLAELQGDRLRLRGEILRPDGSEVIAAERVGPAADGAAMGTDLAEELRGRAPA 307
Query: 303 NVFNF 307
+ F++
Sbjct: 308 DFFDW 312
>gi|260574199|ref|ZP_05842204.1| porphobilinogen deaminase [Rhodobacter sp. SW2]
gi|259023665|gb|EEW26956.1| porphobilinogen deaminase [Rhodobacter sp. SW2]
Length = 314
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 180/303 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLAL A ETR SLM +P I+ + GD++ +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALWQAHETRRSLMAAFSLPEAAFEIVVIKVTGDQVQDRALKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE L+ G ID AVHS KDMPT +GL + YLPRED+RD F+S T L DL
Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPTLQPEGLLLDCYLPREDVRDAFVSPTVARLADLPHG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL V
Sbjct: 131 ATVGSSSLRRRAQLAARRPDLNLVEFRGNVQTRMKKLEDGVAVATFLAMAGLNRLGMAHV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + +E+ P+ QGAI IE +P+A+ L+ I+H T + CERA+L ELDGSC
Sbjct: 191 ARSAIEVEEMLPAVAQGAIGIERRTADPRAEALLAGIHHGPTGIRLACERAYLQELDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG + +G ++ G +L DG DA GRD A+ + + +
Sbjct: 251 ATPIAGMSVLEGDRIWLRGEILRPDGSEVIAGEIRAAASDAAEAGRDLARQLLGRAPEGF 310
Query: 305 FNF 307
F++
Sbjct: 311 FSW 313
>gi|15241573|ref|NP_196445.1| HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase
[Arabidopsis thaliana]
gi|2495179|sp|Q43316|HEM3_ARATH RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10 [Arabidopsis thaliana]
gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|332003894|gb|AED91277.1| Porphobilinogen deaminase [Arabidopsis thaliana]
Length = 382
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 184/297 (61%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL
Sbjct: 75 IRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA +L +L
Sbjct: 135 FTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPA 194
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 195 GSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG
Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296
SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 315 SCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQEL 371
>gi|296446253|ref|ZP_06888200.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b]
gi|296256290|gb|EFH03370.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b]
Length = 308
Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 168/296 (56%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR SPLALA E R L P + I + T GD I +R L E GG
Sbjct: 1 MTTAILTIGTRGSPLALAQTHEVRRLLAAALGAPEEALPIEIIRTTGDMIQDRPLAESGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT E++ L G ID AVHS+KD+PT L + I+ +LPRED+RD +I SL D
Sbjct: 61 KGLFTRELDIALAEGRIDLAVHSSKDLPTHLPPEIAIAGFLPREDVRDAWIGRGGASLAD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR A + R R D+SV RG +ETRL+K+ + + LLA AG+KRL
Sbjct: 121 LPQGAVVGTASLRRGAQVKRLRPDVSVTLLRGNVETRLHKVESGEVDGTLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
IL +EDF P+ GQGAI I + + ++ + I T ++ ERAFL L
Sbjct: 181 LADKATAILPLEDFLPAAGQGAIAITKRAGDARTRDALAPILDAATGAALAAERAFLTVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
DGSC++ IA A G + F+G+ L +DG +E R G DA +G DAA I
Sbjct: 241 DGSCRTPIAAHARVDGDAMEFHGLALRADGSEIYEARRRGAAIDAARLGDDAANEI 296
>gi|288957245|ref|YP_003447586.1| hydroxymethylbilane synthase [Azospirillum sp. B510]
gi|288909553|dbj|BAI71042.1| hydroxymethylbilane synthase [Azospirillum sp. B510]
Length = 312
Score = 231 bits (589), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 175/307 (57%), Gaps = 2/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M P RIGTR SPLALA A ETR L+ H P I I+ T GDRI +RTL E
Sbjct: 1 MTTHPLRIGTRGSPLALAQAHETRDRLIAAHPHLAAPGAIEIVVFKTTGDRILDRTLAEA 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L G D AVHS KD+PT+L GL+I+ LPRED RD F S + L
Sbjct: 61 GGKGLFTKELEEALFDGRADLAVHSMKDVPTQLPDGLEIATLLPREDPRDAFFSRSGGGL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL +V+GT+ LRR+A +L R D+ + RG ++TRL+KL+ + A LLA AG++R
Sbjct: 121 ADLPAGAVVGTAGLRRQAQVLELRPDLRIFPLRGNVQTRLSKLDAGEVDATLLALAGLRR 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +L E P+ QGAI IE + + L+ +N +T V ERA LA
Sbjct: 181 LGLTGRISAVLEPETMLPAVAQGAIGIEIRSADDATRALLAPLNCAETMVRVTAERALLA 240
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDGSC++ IA A G L+ VL+ DG+ R G +A ++G DA IR
Sbjct: 241 ALDGSCRTPIAALALLDGDALHLRAKVLSCDGRSIFRAERRGKAANAESLGADAGAEIRA 300
Query: 299 ISNKNVF 305
+ F
Sbjct: 301 QLPPDFF 307
>gi|218190145|gb|EEC72572.1| hypothetical protein OsI_06012 [Oryza sativa Indica Group]
Length = 358
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL
Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+
Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289
Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFI 299
C++ IA +A K F G++ + DG +E SR G+ D + +G+DA ++
Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGSY-DFDIMVEMGKDAGHELKAK 348
Query: 300 SNKNVFN 306
+ F+
Sbjct: 349 AGPGFFD 355
>gi|168034136|ref|XP_001769569.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679111|gb|EDQ65562.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 186/305 (60%), Gaps = 4/305 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGLF
Sbjct: 57 RIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALDIVIIKTTGDKILSQPLADIGGKGLF 116
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L
Sbjct: 117 TKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPKYSSLAELPEG 176
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+G++SLRR++ LL + V++FRG ++TRL KLN A LLA AG+KRL +
Sbjct: 177 SVVGSASLRRQSQLLHRYPHLQVVNFRGNVQTRLRKLNEGVCAATLLALAGLKRLDMTEH 236
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I IL +D P+ QGAI I + K +E + +NHEDT +++CERAFLA+LDGSC
Sbjct: 237 ITAILETDDMLPAIAQGAIGIACRTGDTKMEEYLASLNHEDTRLAISCERAFLAKLDGSC 296
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNK 302
++ IAG A F G+V +DGK E SR G+ D I + +DA Q + +
Sbjct: 297 RTPIAGLAQRTEDGCLFRGLVATTDGKQVLETSRTGSFSYDDMIALAQDAGQELISRAGP 356
Query: 303 NVFNF 307
F +
Sbjct: 357 GFFQW 361
>gi|115444475|ref|NP_001046017.1| Os02g0168800 [Oryza sativa Japonica Group]
gi|75259105|sp|Q6H6D2|HEM3_ORYSJ RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|49388602|dbj|BAD25717.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group]
gi|113535548|dbj|BAF07931.1| Os02g0168800 [Oryza sativa Japonica Group]
gi|222622259|gb|EEE56391.1| hypothetical protein OsJ_05540 [Oryza sativa Japonica Group]
Length = 358
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL
Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+
Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289
Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300
C++ IA +A K F G++ + DG +E SR G + + +G+DA ++ +
Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKA 349
Query: 301 NKNVFN 306
F+
Sbjct: 350 GPGFFD 355
>gi|254511195|ref|ZP_05123262.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11]
gi|221534906|gb|EEE37894.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11]
Length = 318
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 168/276 (60%), Gaps = 5/276 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L +P I+ + T GD +R L E+G
Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLSTAFDLPEDAFEIVVIKTTGDNRAMIDADRPLKEVGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ GEID AVHS KDMP +GL + +LPRED+RD FIS S+ D
Sbjct: 71 KGLFTKEIEEAMLKGEIDIAVHSTKDMPVAQPQGLVLDTFLPREDVRDAFISPGLNSIHD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG++RL+
Sbjct: 131 LPRGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLKKLADGVADCTFLAMAGLRRLE 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V ++ +D P+ QGAI IE ++ +A ++ I+H +T + ER+ LA L
Sbjct: 191 MADVPATAISPDDMLPAIAQGAIGIERRNDDSRAAGMLAAIHHPETAQRLAAERSLLAGL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHE 275
DGSC++ IAG A + L G VL DG + HE
Sbjct: 251 DGSCETPIAGLAEIRDGQLRLRGEVLRPDGTESIHE 286
>gi|224008054|ref|XP_002292986.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335]
gi|220971112|gb|EED89447.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335]
Length = 330
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 181/309 (58%), Gaps = 8/309 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIGG 60
P RIGTR SPLALA A+ETR L + P I I + T+GD I +++L E+GG
Sbjct: 9 PLRIGTRGSPLALAQAYETRRRL--IENFPELEAEGAIEICVMKTQGDMILDKSLMELGG 66
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSL 118
KGLFT+E++ L+ E+D VHS KD+PT L +G + LPRED D FI+ + +
Sbjct: 67 KGLFTKELDTALLGDEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITANGDIKRI 126
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL +SVIGT+SLRR+A +L + ++FRG ++TRL KL++ A LLA AG+KR
Sbjct: 127 ADLPDNSVIGTASLRRQAQILAQNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKR 186
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + IL ++ P+ QGAI I+ ++ ++ + + +N DT VNCERAFL
Sbjct: 187 MDMDDCATAILEWDEMLPAVAQGAIGIQCRSDDTRSLKYIDALNCMDTHVCVNCERAFLE 246
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDG+CK+ IAG A + F G++ DG + +E G DA+ IGR A + ++
Sbjct: 247 ALDGNCKTPIAGQARIVDGKIVFKGLIAMPDGSLKYETEATGEIADAVEIGRKAGEELKA 306
Query: 299 ISNKNVFNF 307
+ + F
Sbjct: 307 QAGEKFFEM 315
>gi|154251802|ref|YP_001412626.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1]
gi|154155752|gb|ABS62969.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1]
Length = 308
Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 182/305 (59%), Gaps = 1/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFET-RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ +RIGTR S LAL A E R + +H I+ +ST GDR+ +R L+EIGGK
Sbjct: 2 QRRYRIGTRGSRLALIQANEVARRIALALHAPVEEVTEIVVISTAGDRVQDRALSEIGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE++L ID AVHS KDMPT L +GL I L R D RD F+S A SL L
Sbjct: 62 GLFTEEIEEQLADARIDVAVHSMKDMPTLLPEGLVIDCLLERADPRDAFLSSKANSLMSL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR A + R D++V+ FRG ++TRL KL + A A LLA AG+ R+
Sbjct: 122 PQGAVVGTSSLRRAAQVRARRPDVTVVPFRGNVDTRLKKLADGVADATLLAMAGLTRMDL 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + L+ E+ P+ QGAI IE + +A L++ ++H +T V ERAFLA LD
Sbjct: 182 LECVTAPLSPEELLPAVAQGAIGIERRAADDEAAHLLEKLHHTETGLRVAAERAFLAVLD 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IA A G + ++L DG HE R G DA+ +G+DA + ++ +
Sbjct: 242 GSCRTPIAALAEISGDHMRLRTMILTPDGAEIHETEREGLAADAVLLGQDAGEELKGRAG 301
Query: 302 KNVFN 306
+ F+
Sbjct: 302 PHFFD 306
>gi|21592624|gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 382
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 183/297 (61%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL
Sbjct: 75 IRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G ID AVHS K +PT L + + LPRED+RD FI TA +L +L
Sbjct: 135 FTKEIDEALINGHIDIAVHSMKYVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPA 194
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 195 GSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG
Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296
SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 315 SCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQEL 371
>gi|190683048|gb|ACE81820.1| hydroxymethylbilane synthetase [Oxyrrhis marina]
Length = 395
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 181/301 (60%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA A + S + + I I +ST+GDRI +R L ++GGKGLFT
Sbjct: 76 LRIGTRGSPLALAQARDVESRAREQLQ-QGGEIDICVISTEGDRILDRALADVGGKGLFT 134
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+SGE+DC VHS KD+PT + G +I AYLPRED RDVF+S +L DL +
Sbjct: 135 KELDRALLSGEVDCCVHSMKDVPTTVAPGTEIVAYLPREDTRDVFLSAKYATLADLPDGA 194
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT+SLRR+A +L + ++ V +FRG ++TRL KL LAYAG+KRL
Sbjct: 195 VVGTASLRRQAQILAQK-NVVVTNFRGNVQTRLRKLAAGTVDCTFLAYAGLKRLGMLAEA 253
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L D P+ QGA+ I+ N+ + + ++HE T +V ERAFL LDGSC+
Sbjct: 254 TQVLEWSDMLPAIAQGAVGIQIRSNDAALRGTLSQLDHEPTRLAVETERAFLRALDGSCR 313
Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG A+ S L F G VL++DGK E + CD +G+ +R + +
Sbjct: 314 TPIAGQAWIGPDSRLAFRGQVLSADGKQRFERVGDCLPCDGPELGKTLGDDLRREAGEEF 373
Query: 305 F 305
F
Sbjct: 374 F 374
>gi|302756929|ref|XP_002961888.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii]
gi|300170547|gb|EFJ37148.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii]
Length = 353
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 190/314 (60%), Gaps = 17/314 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + + I+ + T GD+I N+ L +IGGKGL
Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L
Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL
Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG
Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283
Query: 243 SCKSAIAGFAY-------CKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAA 293
SC++ IAG+A+ CK F G+V + DG E +R+G N + + +G+DAA
Sbjct: 284 SCRTPIAGYAHRDKLTDECK-----FRGLVASPDGTQVLETTRSGQYNLDEMVAMGKDAA 338
Query: 294 QYIRFISNKNVFNF 307
+ + S ++ N+
Sbjct: 339 KELLSKSGPSLLNW 352
>gi|303274460|ref|XP_003056550.1| porphobilinogen deaminase, chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226462634|gb|EEH59926.1| porphobilinogen deaminase, chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 376
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 184/305 (60%), Gaps = 8/305 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSL----MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+IGTR SPLALA A+ TR L +++ + I II T GD++ ++ L +IGGKG
Sbjct: 64 KIGTRGSPLALAQAYMTRDLLKKNFVELSEEGALEICII--KTTGDKVLDQPLADIGGKG 121
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L
Sbjct: 122 LFTRELDVALLDGRIDIAVHSMKDVPTYLPEGSILPCMLPREDVRDAFISVKYDDLSELP 181
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+
Sbjct: 182 DGALVGTASLRRQSQLLAKFPTLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMT 241
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ +IL + P+ QGAI I + + E ++ +NHE+T +V CERAFLA LDG
Sbjct: 242 EHATKILETDVMLPAVAQGAIGIACRTGDSRQLEFLEKLNHEETRIAVECERAFLASLDG 301
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300
SC++ IAG+AY G+ L F G+V + DGK E +R+ N DAI+ G+DA ++ ++
Sbjct: 302 SCRTPIAGYAYKSGNNLEFRGLVASLDGKQILETTRSSNWSFTDAIDAGKDAGNELKALA 361
Query: 301 NKNVF 305
F
Sbjct: 362 PSEFF 366
>gi|302817137|ref|XP_002990245.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii]
gi|300141954|gb|EFJ08660.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii]
Length = 353
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 190/314 (60%), Gaps = 17/314 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + + I+ + T GD+I N+ L +IGGKGL
Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L
Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL
Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG
Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283
Query: 243 SCKSAIAGFAY-------CKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAA 293
SC++ IAG+A+ CK F G+V + DG E +R+G N + + +G+DAA
Sbjct: 284 SCRTPIAGYAHRDKLTDECK-----FRGLVASPDGTQVLETTRSGQYNFDEMVAMGKDAA 338
Query: 294 QYIRFISNKNVFNF 307
+ + S ++ N+
Sbjct: 339 KELLSKSGPSLLNW 352
>gi|289548019|ref|YP_003473007.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484]
gi|289181636|gb|ADC88880.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484]
Length = 300
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 180/291 (61%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L D+ H + ++P++T GD+IT+ L +IGGKGLF
Sbjct: 3 IRIGTRRSQLALWQANYVKRKLEDMG----HTVELVPITTTGDKITDAPLAKIGGKGLFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G+ID AVHS KD+PTKL GL + A RE DV IS Q L++L +
Sbjct: 59 KEIEEALLRGDIDVAVHSLKDVPTKLPDGLTLGAITERELPYDVLISRDGQRLENLPTGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRK + R R D+ + D RG ++TR+ KL+ + AI+LAYAGI+R+ E I
Sbjct: 119 VVGTSSLRRKVQIKRMRRDLVIKDLRGNVDTRIRKLDEGQYDAIVLAYAGIRRMGWENRI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+IL EDF P+ GQG++ +E ++ K +E++ +++H ++ V ERAFL ++G C+
Sbjct: 179 VQIL--EDFIPAVGQGSMAVEIREDDEKIREVISLLDHRESRIRVEAERAFLEVMEGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ A+ GS L+ G + +G+ F E GN A +GR+ A+ I
Sbjct: 237 VPMGAIAWLDGSRLFMKGFLSDLEGENFVEAYVEGNVEKAQLLGRELAEKI 287
>gi|168057909|ref|XP_001780954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667588|gb|EDQ54214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 299
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 4/299 (1%)
Query: 13 SPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
SPLALA A++TR L H + II + T GD+I ++ L +IGGKGLFT+EI+
Sbjct: 1 SPLALAQAYQTRDKLKAAHPGLAEEGALEIIIIKTTGDKILSQPLADIGGKGLFTKEIDD 60
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130
L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L SV+G++
Sbjct: 61 ALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEGSVVGSA 120
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190
SLRR++ +L + V +FRG ++TRL KL+ A LLA AG+KRL + I IL
Sbjct: 121 SLRRQSQILHKYPHLKVENFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEHITAILA 180
Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+D P+ QGAI I + K +E + +NHE T +++CERAFLA+LDGSC++ IAG
Sbjct: 181 TDDMLPAIAQGAIGIACRTGDSKMEEYLASLNHEGTRLAISCERAFLAKLDGSCRTPIAG 240
Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNKNVFNF 307
A F G+V +DGK E SR G+ D I + +DA + + + F +
Sbjct: 241 LAERTEDGCSFRGLVATTDGKQVLETSRKGSFSYDDMIALAQDAGAELISRAGPDFFKW 299
>gi|294676723|ref|YP_003577338.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003]
gi|12280937|gb|AAG50298.1| porphobilinogen deaminase [Rhodobacter capsulatus]
gi|294475543|gb|ADE84931.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003]
Length = 317
Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 178/305 (58%), Gaps = 4/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT----NRTLTEIGG 60
P +IGTR SPLALA AFETRS LM +P I+ + T GD ++ L E+GG
Sbjct: 10 PLKIGTRGSPLALAQAFETRSRLMAAFDLPEEAFEIVVIKTSGDNAALIAADKPLKEVGG 69
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++G ID AVHS KDMPT +GL + YLPRED RD F+S SL +
Sbjct: 70 KGLFTKEIEEAMLAGSIDIAVHSMKDMPTLQPEGLILDCYLPREDTRDAFVSMKYNSLAE 129
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A L R D+ +++FRG ++TR+ KL A A LA AG+ RL
Sbjct: 130 LPEGAVVGTSSLRRRAQLAARRPDLKMVEFRGNVQTRMKKLGEGVADATFLALAGLNRLG 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+V K + ED P+ QG I IE + +A+ L+ I+H + + CER+FL L
Sbjct: 190 MSEVAKSAIEPEDMLPAVAQGCIGIERREADTRAKMLLDAIHHAPSGLRLACERSFLLTL 249
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G + +G ++ G +L DG G D + +G + A+ + +
Sbjct: 250 DGSCETPIGGLSVLEGDQIWLRGEILRPDGSETITGEIRGPAADGVALGAELAKQLLAKA 309
Query: 301 NKNVF 305
+ F
Sbjct: 310 PADFF 314
>gi|154245106|ref|YP_001416064.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2]
gi|154159191|gb|ABS66407.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2]
Length = 317
Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 172/302 (56%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL A +++L + I + + T GD+I +R L+E GGKGLFT
Sbjct: 16 LRIGTRGSPLALWQAHAVQAALAVALGVEKEAIAVEVIKTSGDQIQDRALSEAGGKGLFT 75
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G +D AVHSAKD+ T L GL ++ YLPR D+RD I + +L DL +
Sbjct: 76 KEIEEALLDGRVDLAVHSAKDVATVLPDGLHLAGYLPRADVRDALILKSGAALADLPAGA 135
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRR+A L R R D+ V RG + TRL K+ + A LLA AG+ RL +
Sbjct: 136 KVGTASLRREAQLRRIRPDLKVELLRGNVHTRLAKVKDGDFDATLLALAGLTRLGMAQAA 195
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L +DF P+ GQGA+ IE + +P + I DT ++ ERAFLA LDGSC+
Sbjct: 196 SCVLATDDFLPAVGQGAVAIECRIADPDTNAAIAAIACRDTGIALEAERAFLAALDGSCR 255
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G ++ G+VL+ DG E++ DA +G + +R +
Sbjct: 256 TPIAGLATVEGESVRLRGLVLSPDGSDAAEIAELAPIADAARLGAECGARLRTSAPARAL 315
Query: 306 NF 307
Sbjct: 316 GL 317
>gi|260431649|ref|ZP_05785620.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157]
gi|260415477|gb|EEX08736.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157]
Length = 320
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60
P +IGTR SPLALA A ETR L D +P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAHETRQRLCDAFDLPEQAFEIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G ID AVHS KDMP + +GL + +LPRED+RD FIS S+ D
Sbjct: 71 KGLFTKEIEEAMLGGYIDIAVHSTKDMPVEQPQGLVLDTFLPREDVRDAFISPRLNSIHD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D++V++FRG ++TRL KL + A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLYRRPDLNVVEFRGNVQTRLKKLADGVAECTFLAMAGLRRLN 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V ++ +D P+ QG I IE ++ +A E+++ I+H +T + ERA LA L
Sbjct: 191 MQDVPATAISPDDMLPAIAQGTIGIERRADDHRAAEMLEAIHHPETAQRLAAERALLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A L G VL DG + G DA +GR A + +
Sbjct: 251 DGSCETPIAGLAEITDGQLRLRGEVLRPDGSESVVSEQMGATEDATEMGRAMASDLLRQA 310
Query: 301 NKNVFNF 307
F +
Sbjct: 311 GPGFFEW 317
>gi|254488942|ref|ZP_05102147.1| porphobilinogen deaminase [Roseobacter sp. GAI101]
gi|214045811|gb|EEB86449.1| porphobilinogen deaminase [Roseobacter sp. GAI101]
Length = 297
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 165/291 (56%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L +P I+ + GD I +R L EIGGKGLFT EIE+ L++G+
Sbjct: 1 MAQAVETRARLSAAFDLPLTAFEIVVIKVTGDMIQDRPLKEIGGKGLFTREIEEDLLAGK 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KDMPT GL + YLPRED RD F++ +L L +V+GTSSLRR+A
Sbjct: 61 IDIAVHSMKDMPTVQPGGLLLDTYLPREDPRDAFVAPLMSALDQLTEGAVVGTSSLRRRA 120
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D+ V++FRG ++TRL KL + A LA AG+ RL E V ++ D P
Sbjct: 121 QLLHKRPDLQVVEFRGNVQTRLRKLADGVAECTFLAMAGLNRLGMENVPATPIDDTDMLP 180
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QGAI IE + + L+ I+ T + ERAFL LDGSC++ IAG A G
Sbjct: 181 AVAQGAIGIERRAGDLDTEALLAAIHDTPTGQRLIAERAFLLTLDGSCETPIAGLATLDG 240
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
TL+ G VL DG R+G D +G D A+ + + N F++
Sbjct: 241 DTLHLRGEVLRPDGSEVISGDRSGPIGDGGQMGVDLARELLSQAGPNFFDW 291
>gi|254440462|ref|ZP_05053956.1| porphobilinogen deaminase [Octadecabacter antarcticus 307]
gi|198255908|gb|EDY80222.1| porphobilinogen deaminase [Octadecabacter antarcticus 307]
Length = 321
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 177/308 (57%), Gaps = 10/308 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE------- 57
P +IGTR SPLALA A ETR+ LM + + + T GD +R+L +
Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMVAFDLAEAAFEVCVIKTTGD---DRSLIDADIPLKV 67
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IG KGLFT+EIE+ +++G+ID AVHS KDMP GL + +LPRED RD F+S
Sbjct: 68 IGNKGLFTKEIEEAMLAGQIDIAVHSTKDMPVAQPDGLVLDVFLPREDARDAFVSVKYSG 127
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ DL +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+
Sbjct: 128 IPDLPEGAIVGTSSLRRRAQLLAKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLN 187
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +++ D P+ QG I IE +++ +A++++ I+ + ER+FL
Sbjct: 188 RMGMDDAAMGAIDLADMLPAIAQGTISIERRIDDLRARDMLAAIHDVQAGQQMAAERSFL 247
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A LDGSC++ IAG A G ++ G +L DG R G + +G++ AQ +
Sbjct: 248 AALDGSCETPIAGLAMIDGDNMWLRGEILKPDGSQVFTGERRGLVTEGRAMGKELAQELL 307
Query: 298 FISNKNVF 305
+ + F
Sbjct: 308 GQAGPDFF 315
>gi|209965647|ref|YP_002298562.1| porphobilinogen deaminase [Rhodospirillum centenum SW]
gi|209959113|gb|ACI99749.1| porphobilinogen deaminase [Rhodospirillum centenum SW]
Length = 323
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 177/298 (59%), Gaps = 3/298 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60
K+P RIGTR SPLALA A ETR L + H P I I+ + T GDRI +RTL E GG
Sbjct: 2 KQPLRIGTRGSPLALAQAHETRRRLAEAHPHLAEPDAIEIVVIKTTGDRILDRTLMEAGG 61
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L + ID AVHS KD+PT GLQ++A LPRED RD + L +
Sbjct: 62 KGLFTKEIEEALQAETIDLAVHSMKDVPTWRQTGLQLTAMLPREDPRDAWFCRHGCGLDE 121
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A +L R D+ V+ FRG ++TR+ KL + A LLA AG++RL
Sbjct: 122 LPAGAVVGTASLRRQAQILARRPDLKVVPFRGNVQTRMTKLAEGQVDATLLALAGLRRLG 181
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + + + P+ QGAI IET + LV +NH +T V ER LA L
Sbjct: 182 LVEHMTAAIETDVMLPAVAQGAIGIETRAADDVTNALVAALNHAETMTRVTAERGVLATL 241
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
DGSC++ IA A G +L +V+ +G+ F+ R G+ DA +G DA Q ++
Sbjct: 242 DGSCRTPIAALAELPGDGSLTLSALVIRPNGQEFYRTERRGDPDDAEAMGIDAGQELK 299
>gi|254452699|ref|ZP_05066136.1| porphobilinogen deaminase [Octadecabacter antarcticus 238]
gi|198267105|gb|EDY91375.1| porphobilinogen deaminase [Octadecabacter antarcticus 238]
Length = 321
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 177/309 (57%), Gaps = 10/309 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE------- 57
P +IGTR SPLALA A ETR+ LM +P + + T GD +R+L +
Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMIAFDLPESAFEVCVIKTSGD---DRSLIDADIPLKV 67
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IG KGLFT+EIE+ +++G ID AVHS KDMP GL ++ +LPRED RD F+S
Sbjct: 68 IGNKGLFTKEIEEAMLAGRIDIAVHSTKDMPVAQPDGLVLNVFLPREDARDAFVSVKYAG 127
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ DL +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+
Sbjct: 128 IADLPEGAIVGTSSLRRRAQLLVKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLN 187
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ ++++D P+ QG I IE V++ +A++++ I++ + ERAFL
Sbjct: 188 RMGMHDAAIGAIDLDDMLPAIAQGTISIERRVDDLRARDMLAAIHNVQAGQQMAAERAFL 247
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A LDGSC++ IAG A ++ G +L DG R G + +G + AQ +
Sbjct: 248 AALDGSCETPIAGLAMIDCDQMWLRGEILKPDGSQVFTGERRGLVSEGAAMGMELAQELL 307
Query: 298 FISNKNVFN 306
+ + F
Sbjct: 308 GQAGPDFFE 316
>gi|194707246|gb|ACF87707.1| unknown [Zea mays]
gi|223947939|gb|ACN28053.1| unknown [Zea mays]
Length = 356
Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 184/306 (60%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287
Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300
C++ IA +AY K F G++ + DG E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|212275007|ref|NP_001130048.1| hypothetical protein LOC100191140 [Zea mays]
gi|194688160|gb|ACF78164.1| unknown [Zea mays]
Length = 394
Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 181/297 (60%), Gaps = 5/297 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287
Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIR 297
C++ IA +AY K F G++ + DG E +R+G D + +G+DA +R
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELR 344
>gi|170749246|ref|YP_001755506.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831]
gi|170655768|gb|ACB24823.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831]
Length = 307
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 174/291 (59%), Gaps = 2/291 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RIGTR SP+ALA R ++ + P ++ ++T D+I +R L+EIGG
Sbjct: 1 MLNRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETELVVVTTVADKILDRPLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L +GE+D AVHS KD+ T L GL I+ L R+D RD F+S A L
Sbjct: 59 KGLFTKELEQALFAGEVDVAVHSMKDVETWLPDGLTIACILERDDPRDAFLSPHADGLAG 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA + +GTSSLRR A +L R D+ V+ RG TR+ KL + A LLA AG++RL
Sbjct: 119 LAAGARVGTSSLRRGAQVLMRRPDLRVVPLRGNANTRMRKLEAGECDATLLALAGLQRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + + +L++E+ P+ QGA+ IE ++ ++L+ I E T +V+ ERA LAEL
Sbjct: 179 LESMARSVLSVEEMLPAVAQGALGIECRADDAVIRDLLAPIACERTTVAVSAERALLAEL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
DGSC++ IA A G +L G++ DG SR G +A IGR+
Sbjct: 239 DGSCRTPIAALAQIDGDSLRIDGLLFLPDGSRHWAASRQGLVAEAERIGRE 289
>gi|242060650|ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
gi|241931445|gb|EES04590.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
Length = 340
Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 177/299 (59%), Gaps = 5/299 (1%)
Query: 13 SPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI+
Sbjct: 41 SDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEIDD 100
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130
++ G ID AVHS KD+PT L +G + LPRED RD FI TA SL +L V+G++
Sbjct: 101 AILQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDARDAFICLTANSLAELPSGCVVGSA 160
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190
SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + IL+
Sbjct: 161 SLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSILS 220
Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ IA
Sbjct: 221 MEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPIAA 280
Query: 251 FAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNKNVFN 306
+A+ K + F G++ + DG +E +R G D + +G+DA ++ + ++
Sbjct: 281 YAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 339
>gi|89894971|ref|YP_518458.1| hypothetical protein DSY2225 [Desulfitobacterium hafniense Y51]
gi|219669373|ref|YP_002459808.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2]
gi|123091755|sp|Q24VC8|HEM3_DESHY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800248|sp|B8G2M2|HEM3_DESHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89334419|dbj|BAE84014.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539633|gb|ACL21372.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2]
Length = 308
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 174/290 (60%), Gaps = 4/290 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LAL A + L + + P V++P+ TKGD+I + L +IG KGLFT+
Sbjct: 5 KIGTRDSQLALWQAEWVKRKLEEYY--PEREFVLVPMKTKGDKILDVPLAKIGDKGLFTK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L++GEIDCAVHS KD+PT L GL+I+A+ RE+ RDVF+S L L S+
Sbjct: 63 ELEVGLLNGEIDCAVHSLKDLPTVLPPGLEIAAFCEREEPRDVFLSKDGTPLGSLPAGSI 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSSLRRKA L +RSD+S D RG ++TR KL + I+LA AG+KRL E I
Sbjct: 123 IGTSSLRRKAQLQNYRSDLSFADLRGNLQTRWRKLQESDMAGIVLAAAGVKRLGWEDRIT 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E ++ E + GQGAI +E +E++ ++NH DT +V ERA L L+G C+
Sbjct: 183 EYISEEIMLSAVGQGAIAVEIAAQRADVREMLDLLNHGDTERAVKAERALLYRLEGGCQI 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A + + G+V + DG+ +V+ +G + +GR AA +
Sbjct: 243 PIGAWAVTEQQQIVLKGMVASLDGQRILKVTLSGEHPE--ELGRQAADLL 290
>gi|219117329|ref|XP_002179459.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217409350|gb|EEC49282.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 329
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 180/309 (58%), Gaps = 8/309 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIG 59
+P RIGTR SPLALA A+ETR L + P I I L T+GD I +++L E+G
Sbjct: 7 QPLRIGTRGSPLALAQAYETRKRL--IENFPDLEAEGAIEICVLKTQGDMILDKSLMELG 64
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQS 117
GKGLFT+E++ L+S E+D VHS KD+PT L G + LPRED D FI + +
Sbjct: 65 GKGLFTKELDTALLSDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFIYKDDSVKR 124
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
++D+ SVIGT+SLRR+A L+ + ++FRG ++TRL KL++ A LLA AG+K
Sbjct: 125 IEDIPDGSVIGTASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLK 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + IL ++ P+ QGAI I+ ++ ++ + + +NH +T V+CER FL
Sbjct: 185 RMDMDGCATSILEWDEMLPAVAQGAIGIQCRDDDERSLKYLAALNHPETKACVDCERGFL 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
LDG+CK+ IAG A + F G++ DG E G +A IGR+A + ++
Sbjct: 245 EALDGNCKTPIAGQARIVDGKIMFRGLIAMPDGSKKFECESEGAIEEAAKIGREAGEGLK 304
Query: 298 FISNKNVFN 306
+ + F
Sbjct: 305 KEAGEEFFQ 313
>gi|218533190|ref|YP_002424006.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4]
gi|218525493|gb|ACK86078.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4]
Length = 309
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 175/303 (57%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGL
Sbjct: 5 RALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLA 122
FT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL
Sbjct: 63 FTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++RL E
Sbjct: 123 PGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGME 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LAELDG
Sbjct: 183 DVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IA A KG + G++ DG EV R G DA IGRDA ++ +
Sbjct: 243 SCRTPIAALAQVKGDRISLDGLLFLPDGSRHWEVHREGLAADADAIGRDAGAELKRAAGD 302
Query: 303 NVF 305
F
Sbjct: 303 VYF 305
>gi|158421885|ref|YP_001523177.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571]
gi|158328774|dbj|BAF86259.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571]
Length = 313
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 162/300 (54%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR SPLAL A R +L P +I I + T GD I +R L+E GGKGLFT+E
Sbjct: 14 IGTRGSPLALWQAHAVRDALAAALARPVESISITVIRTSGDSIQDRALSEAGGKGLFTKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE++L+ G ID AVHSAKDM T L GL +S +LPR D+RD I +SL DL + I
Sbjct: 74 IEEQLLDGRIDLAVHSAKDMATALPDGLFLSGFLPRADVRDALILREGKSLADLPAGARI 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+A L R R D+ V RG + TRL K+ LLA AG+ RL
Sbjct: 134 GTASLRREAQLRRLRPDLDVSLLRGNVHTRLAKVREGTFDGTLLALAGLTRLGLAHEASA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+ + F P+ GQGA+ IE+ V + + I T ++ ERA L LDGSC++
Sbjct: 194 VLDTDAFLPAVGQGAVAIESRVGDEATNGAIAAIACRATGIALAAERALLTALDGSCRTP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
I G A +G + G++L+ DG+ E DA +G D +R +
Sbjct: 254 IGGLATVEGDMVRLRGLILSPDGRDAAEADETAPVSDAARLGADMGARLRATAPARALGL 313
>gi|242060648|ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
gi|241931444|gb|EES04589.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
Length = 356
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 183/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGN 287
Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300
C++ IA +AY K F G++ + DG E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|114566228|ref|YP_753382.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318683|sp|Q0AZ43|HEM3_SYNWW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114337163|gb|ABI68011.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 306
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 177/291 (60%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LAL A +SL++ IP + I + T GD+I + L++IG KGLFT
Sbjct: 4 LRLGTRGSQLALWQARHV-ASLLE-SSIPDLKVEIKTIKTTGDKILDVALSKIGDKGLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIEK+L+ GEID AVHS KD+P++L GL I+A L RED RDV +SH SL DL +
Sbjct: 62 KEIEKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLPQAA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSSLRR A L WR D+ ++D RG +ETR+ K+ I+LA AG+KRL E++I
Sbjct: 122 LIGTSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLEEMI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ GQG I +E + +L+ INH+D++ + ER FL EL G C+
Sbjct: 182 SDYLPAHLVLPAVGQGMIAVEARSDEQDVLKLLSRINHQDSFLAGQAERGFLHELGGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A A +G L+ G++ + DGK + S + + +A GR+ A+ +
Sbjct: 242 VPVASLAELQGGQLHIRGLIASLDGKEKYSGSSDCSPPEAEEAGRELARSL 292
>gi|226509736|ref|NP_001150986.1| LOC100284619 [Zea mays]
gi|195643410|gb|ACG41173.1| porphobilinogen deaminase [Zea mays]
Length = 356
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKATHSELAEERAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SVIG++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL +
Sbjct: 168 GSVIGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300
C++ IA +AY F G++ + G E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDNDGNCSFRGLLASPGGSKVFETTRSGPYSFDDMVEMGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|163854244|ref|YP_001642287.1| porphobilinogen deaminase [Methylobacterium extorquens PA1]
gi|163665849|gb|ABY33216.1| porphobilinogen deaminase [Methylobacterium extorquens PA1]
Length = 309
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 173/303 (57%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGL
Sbjct: 5 RALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLA 122
FT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL
Sbjct: 63 FTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++RL
Sbjct: 123 PGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LAELDG
Sbjct: 183 DVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IA A KG + G++ DG V R G DA IGRDA ++ +
Sbjct: 243 SCRTPIAALAQVKGDRISLDGLLFLPDGSRHWAVHREGLAADADTIGRDAGAELKRAAGD 302
Query: 303 NVF 305
F
Sbjct: 303 VYF 305
>gi|114770079|ref|ZP_01447617.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255]
gi|114548916|gb|EAU51799.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255]
Length = 307
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 160/266 (60%), Gaps = 1/266 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR SPLALA A ET L+ + I + T GD+I +R L+E+GGKGLF
Sbjct: 8 PLVIGTRGSPLALAQAHETMGRLIRSTGLDESCFKITVIKTSGDKIQDRPLSEVGGKGLF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE ++ ID AVHS KDMP +GL++S YLPRED+RD FIS +++ +L
Sbjct: 68 TKEIEDAMLDYGIDIAVHSMKDMPVICPEGLKLSCYLPREDVRDSFISTKYKNINELPKG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A LL R D+ +++FRG ++TRL KLN A A LA AG+ RL + ++
Sbjct: 128 ATVGTSSLRRRAQLLNKRPDLKIVEFRGNVQTRLRKLNEGVAEATFLACAGLNRLGRNEI 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I +D P+ QG I IE + + E++ IN + + ER LAELDGSC
Sbjct: 188 SNPI-EPDDMLPAIAQGCIGIEQREGDTEIAEILTKINDKSASLRLAAERTLLAELDGSC 246
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
++ IAG A G + G V+ DG
Sbjct: 247 QTPIAGLAELDGQKMRLRGEVIRPDG 272
>gi|255070965|ref|XP_002507564.1| hydroxymethylbilane synthase [Micromonas sp. RCC299]
gi|226522839|gb|ACO68822.1| hydroxymethylbilane synthase [Micromonas sp. RCC299]
Length = 353
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 176/298 (59%), Gaps = 8/298 (2%)
Query: 6 FRIGTRCSPLALAHAFETR----SSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+IGTR SPLALA A+ TR +S ++ I II T GD++ ++ L +IGGK
Sbjct: 40 IKIGTRGSPLALAQAYMTRDLLKASFPELGNDGALEICII--KTTGDKVLDQPLADIGGK 97
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L
Sbjct: 98 GLFTRELDVALLDGRIDIAVHSMKDVPTYLPEGTILPCMLPREDVRDAFISVKYDDLSEL 157
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+
Sbjct: 158 PEGSLVGTASLRRQSQLLARFPGLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDM 217
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+++ P+ QGAI I + K ++ +NHE+T +V CER+FLA LD
Sbjct: 218 TQHATKILDVDVMLPAVAQGAIGIACRTGDSKQITYLESLNHEETRIAVECERSFLAALD 277
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--NGNRCDAINIGRDAAQYIR 297
GSC++ IAGFA G L F G+V A DG E SR + DAI G++A ++
Sbjct: 278 GSCRTPIAGFARKDGDNLRFNGLVAALDGSEILETSRVTKWSYADAIAAGKEAGAELK 335
>gi|83313519|ref|YP_423783.1| porphobilinogen deaminase [Magnetospirillum magneticum AMB-1]
gi|82948360|dbj|BAE53224.1| Porphobilinogen deaminase [Magnetospirillum magneticum AMB-1]
Length = 262
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 160/258 (62%)
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+ +R L EIGGKGLFT+E+++ ++SG I AVHS KD+PT+L G+ + LPRED+RD
Sbjct: 1 MQDRPLAEIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTQLPDGIVLPCILPREDVRDA 60
Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169
F+S SL +L +V+GTSSLRR A +L R D+ V++FRG ++TRL KL A
Sbjct: 61 FLSLKVGSLAELPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLEEGVVDAT 120
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AG++RL + L+ +D P+ QGAI I ++ + + + +N D++
Sbjct: 121 MLAMAGLRRLGLAQHATSALSEDDMLPAVAQGAIGITCRADDQASLDYLAALNCPDSFVR 180
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
V ERAFL LDGSC++ IA A G L F G++++ DG H +R+G+R DA +G
Sbjct: 181 VAAERAFLTRLDGSCRTPIAALAELDGDRLSFRGLIVSPDGTTVHATARSGSRADAEAMG 240
Query: 290 RDAAQYIRFISNKNVFNF 307
+DAA+ + ++ F+
Sbjct: 241 KDAAEELIKVAGPGFFDL 258
>gi|188584576|ref|YP_001928021.1| porphobilinogen deaminase [Methylobacterium populi BJ001]
gi|179348074|gb|ACB83486.1| porphobilinogen deaminase [Methylobacterium populi BJ001]
Length = 309
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 171/304 (56%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKG
Sbjct: 4 SRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDL 121
LFT+E+E+ L + ID AVHS KD+ T L GL I+ L R+D RD F+S TA L DL
Sbjct: 62 LFTKELEQALFADTIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSAGTANGLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR A +L R D+ ++ RG TR+ KL + A LLA AG++RL
Sbjct: 122 PSGARVGTSSLRRGAQVLMHRPDLMIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGM 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E V + +L +E+ P+ QGA+ IE + + L+ + T +++ ER LAELD
Sbjct: 182 EDVARSVLPVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELD 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IA A G + G++ DG V R G +A IGRDA ++ +
Sbjct: 242 GSCRTPIAALAQVNGDRIALDGLLFLPDGSRHWAVHREGPAAEADAIGRDAGAELKRSAG 301
Query: 302 KNVF 305
F
Sbjct: 302 DVYF 305
>gi|83308731|emb|CAJ01641.1| porphobilinogen deaminase (ec 4.3.1.8) [Methylocapsa acidiphila]
Length = 293
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 161/267 (60%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA A E R L +I I I+ + T GD I +R L+E GGKGLFT+E++ L+
Sbjct: 1 MALAQAHELRGRLAASSRIDGDAIEIVVIKTSGDVIQDRALSEAGGKGLFTKELDFALMR 60
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
GE+D AVHSAKD+PT L + I+ YLPRED+RD +IS A +L +V+GT+SLRR
Sbjct: 61 GEVDIAVHSAKDLPTSLPGEIAIAGYLPREDVRDAWISPKAAHPLELPAGAVVGTASLRR 120
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
A++ R R D+S++ RG +ETRL KL + A LLA AG+KRL E +L+ +F
Sbjct: 121 GAMVKRLRPDLSIVLLRGNVETRLGKLAAGEVDATLLALAGLKRLGLEDRATAVLDAGEF 180
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+ GQGAI I + A + + + T ++ ERAFL LDGSCK+ I A
Sbjct: 181 VPAAGQGAIAITLRAGDQAALDALAPVLDAATGAALAAERAFLHVLDGSCKTPIGAHARL 240
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGN 281
G + F+G+VL DG F EV +G+
Sbjct: 241 AGDEINFHGVVLKPDGSQFFEVVLSGS 267
>gi|170738754|ref|YP_001767409.1| porphobilinogen deaminase [Methylobacterium sp. 4-46]
gi|168193028|gb|ACA14975.1| porphobilinogen deaminase [Methylobacterium sp. 4-46]
Length = 311
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M +P RIGTR SP+ALA R + H P + ++ ++T DRI +R L+ I
Sbjct: 1 MAHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADRILDRPLSAI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I+ L R+D RD F+S + SL
Sbjct: 61 GGKGLFTKELEQALFAGEIDVAVHSMKDVETWLPDGLVIACILERDDPRDAFLSLASGSL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L + +GTSSLRR A +L R D+ ++ RG TR+ KL A LLA AG++R
Sbjct: 121 AELPAGARVGTSSLRRGAQVLMRRPDLRIVPLRGNANTRIRKLEEGVCDATLLAIAGLER 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + + ++ +E+ P+ QGA+ IE + L++ + T ++ ER LA
Sbjct: 181 LGLAHLARTVIPVEEMLPAVAQGALGIECRAADEDVIALLQAVACPRTTTALAAERGLLA 240
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IA A G L G++ DG +R+G +A +IGR+A ++
Sbjct: 241 ELDGSCRTPIAALAQIDGDRLTLDGLLFLPDGSAHWATTRSGPAAEAASIGREAGADLKA 300
Query: 299 ISNKN 303
+ +
Sbjct: 301 QAGET 305
>gi|109896672|ref|YP_659927.1| porphobilinogen deaminase [Pseudoalteromonas atlantica T6c]
gi|123065108|sp|Q15Z15|HEM3_PSEA6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|109698953|gb|ABG38873.1| hydroxymethylbilane synthase [Pseudoalteromonas atlantica T6c]
Length = 309
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 174/296 (58%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG
Sbjct: 1 MSDRVIRIATRKSALAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T S+++
Sbjct: 59 KGLFIKELEVAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+++ D RG + TRL KL++ + AI+LA AG+ RL+
Sbjct: 119 LPQGAIVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDDGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L
Sbjct: 179 MQDRIKTYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAERAMNAKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I +A G LY G+V + DG + + + GN DA++IG D A+ +
Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVDVAEQL 294
>gi|220921724|ref|YP_002497025.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060]
gi|219946330|gb|ACL56722.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060]
Length = 318
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 173/299 (57%), Gaps = 2/299 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M +P RIGTR SP+ALA R + H P + ++ ++T D++ +R L+ I
Sbjct: 8 MVHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADKVLDRPLSAI 67
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I++ L R+D RD F+S A+SL
Sbjct: 68 GGKGLFTKELEQALFAGEIDLAVHSMKDVETWLPDGLVIASILERDDPRDAFLSLKARSL 127
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L S +GTSSLRR A +L R D+ ++ RG TR+ +L A LLA AG++R
Sbjct: 128 AELPAGSRVGTSSLRRGAQVLMRRPDLQIVPLRGNANTRIRRLEEGACDATLLAIAGLER 187
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + +E++ + P+ QGA+ IE + + +L++ + T ++ ER LA
Sbjct: 188 LGLAHLAQEVMGTDTMLPAVAQGALGIECRAADQELIDLLQAVACPRTTTALAAERGLLA 247
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
ELDGSC++ IA A +G L G++ DG +R+G +A IG++A ++
Sbjct: 248 ELDGSCRTPIAALAEIEGDRLTLNGLLFLPDGSAHWATTRSGPAAEAAAIGKEAGADLK 306
>gi|297617596|ref|YP_003702755.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680]
gi|297145433|gb|ADI02190.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680]
Length = 316
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 173/300 (57%), Gaps = 2/300 (0%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RIGTR S LAL A L D P H I + TKGD+IT+ L++IG KGLFT+
Sbjct: 12 RIGTRGSRLALWQANYVVKRLRDC--FPGHEFEITVIKTKGDKITDVALSKIGDKGLFTK 69
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE L+ EID AVHS KD+PT L +G++++A L RE+ DV +S SL L +
Sbjct: 70 EIEMALLREEIDIAVHSLKDLPTTLPEGIRLAAVLERENPLDVLLSFKGYSLSGLPRGAR 129
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSSLRR A L R R DI ++ RG +ETR+ K+ + I+LAYAG+KR+ ++
Sbjct: 130 IGTSSLRRTAQLKRLRPDIETVNLRGNVETRIRKMEDEGLDGIVLAYAGVKRMGFLHLVT 189
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
EIL+ + P+ GQG I +E + A+ELVK +NH+ TW + ERAFL ++G C+
Sbjct: 190 EILHPDQVIPAVGQGVIALEIKEDGKVAEELVKPLNHQPTWAEITAERAFLKAIEGGCQV 249
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
A + L G+V + DG++ + +G+ A +G + A+ I + ++
Sbjct: 250 PCGCHASYQEGYLTVDGLVASLDGQVVYRDRVSGSEAFAQQLGEELARRILAMGGGSLLE 309
>gi|256821394|ref|YP_003145357.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069]
gi|256794933|gb|ACV25589.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069]
Length = 311
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLA+ A +S L +H P + ++P++T+GD+I LT+IGG
Sbjct: 1 MSISTLRIATRQSPLAMWQAEYVQSRLQQLH--PDLTVELVPMTTQGDKILGTPLTKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL++ RED D F+S+ +L D
Sbjct: 59 KGLFVKELEQAMLEGRADIAVHSMKDVPYQFPEGLELKVICEREDPTDAFVSNKYHNLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRK LLR R D+ + D RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 119 LPCGANVGTSSLRRKIQLLRARPDLKITDLRGNVGTRLSKLDDGNYDAIVLASAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ E P+PGQGA+ IE N+P +++ + E T V ER L
Sbjct: 179 LEERIRSQFEPELMLPAPGQGAVGIEARTNDPDLDAILQPLQDETTSLRVLAERTITKTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
SC+ +A FA TL +V D +I E S G DA+ IG +Q + +
Sbjct: 239 QASCQVPVAAFATINDDTLSLRALVGGVDQQII-EASAEGPAQDALAIGHKVSQELLELG 297
Query: 301 NKNVFN 306
+ +
Sbjct: 298 ARELIQ 303
>gi|308051395|ref|YP_003914961.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799]
gi|307633585|gb|ADN77887.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799]
Length = 310
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 175/296 (59%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L H P + ++ +STKGDRI + L ++GG
Sbjct: 1 MARKEIRIATRKSPLALWQAEFVKAELEKAH--PGLTVTLLKMSTKGDRILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E +++GE D AVHS KD+P + +GL ++ RED RD F+S+T ++L D
Sbjct: 59 KGLFVKELEVAMLNGEADIAVHSMKDVPVEFPEGLGLAVICDREDPRDAFVSNTYKNLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++G+SSLRR+ L R D+ V D RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPHGAIVGSSSLRRQCQLRAMRPDLDVRDLRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I + E P+ GQGA+ IE +++ + L+ V+NH T V ERA L
Sbjct: 179 LEERITAFIEPEQSLPANGQGAVGIECRLDDAELLALIGVLNHAPTHARVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I ++ +G TL+ G+V DG + G DA +G + A+ +
Sbjct: 239 EGGCQVPIGAYSVIEGDTLWLRGLVGDPDGSKIIQDELRGPVADAQKLGIELAERL 294
>gi|193215989|ref|YP_001997188.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110]
gi|238058923|sp|B3QWI1|HEM3_CHLT3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|193089466|gb|ACF14741.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110]
Length = 314
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/269 (43%), Positives = 164/269 (60%), Gaps = 2/269 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A ++ L + P +I + + T GD+I + L +IG KG
Sbjct: 2 KKALIIGTRSSPLALWQAEFIKAELSKHY--PSLDISLRHIKTTGDKILDAPLAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE ++ EID AVHS KD+PT+ +GL I+A RED RDV IS +LK L
Sbjct: 60 LFTREIEHVMLRNEIDLAVHSLKDLPTETPEGLVITAITEREDNRDVLISKGKYTLKTLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++ TSSLRR++ LL R D+ VID RG + TR + A A+LLA+AG+ RL+
Sbjct: 120 QGAIVATSSLRRRSQLLHLRPDLEVIDMRGNLNTRFKRFEEGDAEAMLLAFAGVHRLEFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I EI++ +D P+ GQGA+ IET +++ + +EL+KV+NH +T CER+ L L+G
Sbjct: 180 EHIAEIISFDDILPAVGQGALGIETRIDDEETRELLKVLNHAETELCTKCERSLLRTLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C+ I A + T +F V + DGK
Sbjct: 240 GCQIPIGAHARIENGTFHFATYVGSIDGK 268
>gi|297581838|ref|ZP_06943759.1| porphobilinogen deaminase [Vibrio cholerae RC385]
gi|297533932|gb|EFH72772.1| porphobilinogen deaminase [Vibrio cholerae RC385]
Length = 317
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L RSD+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARSDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|325918388|ref|ZP_08180519.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937]
gi|325535411|gb|EGD07276.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937]
Length = 304
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDDPFVLPAILGRGDAADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ D+ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPDWLPAPAQGAVAVECRGDDARIHALLAVLDAPTTRVCVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G LY G+V ASDG++ H +G+ D +GR AQ +
Sbjct: 242 VPVAAFATWEGEGLYLQGMVGSASDGRLIH-ADAHGSAGDTEELGRRVAQGL 292
>gi|308188851|ref|YP_003932982.1| Porphobilinogen deaminase [Pantoea vagans C9-1]
gi|308059361|gb|ADO11533.1| Porphobilinogen deaminase [Pantoea vagans C9-1]
Length = 317
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 164/289 (56%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+
Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 123 LPQGAVVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++ + E P+ GQGA+ IE +N+ +L++ +NH+DT V ERA L
Sbjct: 183 MQDRIRQAMPAEVSLPAVGQGAVGIECRLNDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I FA +G L+ G+V A DG++ R G R A +G
Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGMVGAPDGRVMVSGERRGPRAQAEQMG 291
>gi|153214841|ref|ZP_01949649.1| porphobilinogen deaminase [Vibrio cholerae 1587]
gi|153830620|ref|ZP_01983287.1| porphobilinogen deaminase [Vibrio cholerae 623-39]
gi|124115084|gb|EAY33904.1| porphobilinogen deaminase [Vibrio cholerae 1587]
gi|148873892|gb|EDL72027.1| porphobilinogen deaminase [Vibrio cholerae 623-39]
Length = 311
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|229525016|ref|ZP_04414421.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426]
gi|229338597|gb|EEO03614.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426]
Length = 317
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|255743926|ref|ZP_05417881.1| porphobilinogen deaminase [Vibrio cholera CIRS 101]
gi|262151165|ref|ZP_06028304.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1]
gi|262167035|ref|ZP_06034752.1| porphobilinogen deaminase [Vibrio cholerae RC27]
gi|262189994|ref|ZP_06048299.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93]
gi|11386839|sp|Q9KVM1|HEM3_VIBCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|255738409|gb|EET93799.1| porphobilinogen deaminase [Vibrio cholera CIRS 101]
gi|262024553|gb|EEY43237.1| porphobilinogen deaminase [Vibrio cholerae RC27]
gi|262031059|gb|EEY49684.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1]
gi|262034117|gb|EEY52552.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93]
Length = 311
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|283780135|ref|YP_003370890.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068]
gi|283438588|gb|ADB17030.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068]
Length = 311
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 174/298 (58%), Gaps = 5/298 (1%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P R+GTR SPLA A R L+ ++ +I ++T+GD+ T++ L +IG
Sbjct: 1 MSDAPKLRLGTRASPLARWQADWVRDQLIAAGI----DVEMILITTEGDQQTSQPLGQIG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G+GLFT+EI+++L++G+ID AVHS KD+PT + GL ++A RED D+ I SL
Sbjct: 57 GQGLFTKEIQRRLLAGDIDLAVHSLKDLPTLPIDGLSLAAVPEREDTADILIGPAGTSLA 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + IGT SLRRKA LL R+D+ ++D RG ++TRL KL+ + HAI+LA AG+KRL
Sbjct: 117 TLPSGAKIGTGSLRRKAQLLHARADLEILDIRGNVDTRLRKLDEGQYHAIILAAAGLKRL 176
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K + + E L P+ GQGA+ IE+ ++P ++L+ ++H T +V ER+ LA
Sbjct: 177 KLDDRMTERLEAPLMLPAVGQGALGIESRSDDPTTRKLLAPLSHAPTLQAVIAERSLLAA 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L C + + A L +VL+ DG+ S DA +G + A+ +R
Sbjct: 237 LRAGCLAPVGAHAQVVDGQLTLAAVVLSIDGQSRLFASLTSAPADAAQLGEEVAELLR 294
>gi|294666828|ref|ZP_06732061.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292603412|gb|EFF46830.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 304
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 173/292 (59%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADGLVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ + T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDADRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D +GR AQ +
Sbjct: 242 VPVAAFARWEGQDLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292
>gi|304398148|ref|ZP_07380023.1| porphobilinogen deaminase [Pantoea sp. aB]
gi|304354434|gb|EFM18806.1| porphobilinogen deaminase [Pantoea sp. aB]
Length = 317
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 165/289 (57%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+
Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 123 LPQGAIVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ + E P+ GQGA+ IE +++ +L++ +NH+DT V ERA L
Sbjct: 183 LEDRIRQAMPAEVSLPAVGQGAVGIECRLDDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I FA +G+ L+ G+V A DG++ R G R A +G
Sbjct: 243 EGGCQVPIGSFAVLEGNDLWLRGMVGAPDGRVMVSGERRGPRAQAEQMG 291
>gi|254291929|ref|ZP_04962710.1| porphobilinogen deaminase [Vibrio cholerae AM-19226]
gi|150422139|gb|EDN14105.1| porphobilinogen deaminase [Vibrio cholerae AM-19226]
Length = 311
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSKIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|294625631|ref|ZP_06704254.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292600054|gb|EFF44168.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 304
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 172/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D +GR AQ +
Sbjct: 242 VPVAAFARWEGQDLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292
>gi|15640152|ref|NP_229779.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587718|ref|ZP_01677479.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121728303|ref|ZP_01681334.1| porphobilinogen deaminase [Vibrio cholerae V52]
gi|147675270|ref|YP_001218298.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|153818935|ref|ZP_01971602.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457]
gi|153822325|ref|ZP_01974992.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|227080356|ref|YP_002808907.1| porphobilinogen deaminase [Vibrio cholerae M66-2]
gi|229508398|ref|ZP_04397902.1| porphobilinogen deaminase [Vibrio cholerae BX 330286]
gi|229508921|ref|ZP_04398411.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|229517035|ref|ZP_04406481.1| porphobilinogen deaminase [Vibrio cholerae RC9]
gi|229606671|ref|YP_002877319.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236]
gi|254851504|ref|ZP_05240854.1| porphobilinogen deaminase [Vibrio cholerae MO10]
gi|298501111|ref|ZP_07010911.1| porphobilinogen deaminase [Vibrio cholerae MAK 757]
gi|9654520|gb|AAF93298.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121548017|gb|EAX58095.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121629433|gb|EAX61862.1| porphobilinogen deaminase [Vibrio cholerae V52]
gi|126510497|gb|EAZ73091.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457]
gi|126520151|gb|EAZ77374.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|146317153|gb|ABQ21692.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|227008244|gb|ACP04456.1| porphobilinogen deaminase [Vibrio cholerae M66-2]
gi|227011878|gb|ACP08088.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|229346098|gb|EEO11070.1| porphobilinogen deaminase [Vibrio cholerae RC9]
gi|229354038|gb|EEO18971.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|229354671|gb|EEO19593.1| porphobilinogen deaminase [Vibrio cholerae BX 330286]
gi|229369326|gb|ACQ59749.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236]
gi|254847209|gb|EET25623.1| porphobilinogen deaminase [Vibrio cholerae MO10]
gi|297540145|gb|EFH76206.1| porphobilinogen deaminase [Vibrio cholerae MAK 757]
Length = 317
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|102139875|gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 426
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 11 RCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
R SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGLFT+EI
Sbjct: 123 RDSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGLFTKEI 182
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L SV+G
Sbjct: 183 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 242
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + +
Sbjct: 243 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 302
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+C++ I
Sbjct: 303 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPI 362
Query: 249 AGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNKNVF 305
A +AY + F G++ + DG E +R+G D + +G+DA ++ + F
Sbjct: 363 AAYAYRDEDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFF 422
Query: 306 N 306
+
Sbjct: 423 D 423
>gi|260914569|ref|ZP_05921037.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325]
gi|260631360|gb|EEX49543.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325]
Length = 311
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I TR SPLAL A + L + P N+V++P+ TKGD I + L +IGG
Sbjct: 1 MTNNTLKIATRQSPLALWQANYVKQRLESFY--PDLNVVLVPMVTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+SGE D AVHS KD+P + +GL +S PRED D +S+T ++L++
Sbjct: 59 KGLFVKELEIALLSGEADIAVHSMKDVPMQFPEGLGLSVICPREDPHDALVSNTYRTLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 119 LPQGAIVGTSSLRRQCQLKQLRPDLKIESLRGNVGTRLSKLDCGDYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++I+D P+ GQGA+ IE N+ + Q+L+ + +T D V ERA L
Sbjct: 179 LTERIASFIDIQDMLPAAGQGAVGIECRKNDSRVQQLLAPLADIETTDCVLAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + +Y G+V A DG +A N+G A+ +
Sbjct: 239 QGGCQVPIAGYAIIENDQIYLRGLVGALDGSAILRAEAKSAVKNAENLGIQVAEMLLQQG 298
Query: 301 NKNVF 305
N+
Sbjct: 299 AGNIL 303
>gi|167625822|ref|YP_001676116.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4]
gi|189028156|sp|B0TJ54|HEM3_SHEHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167355844|gb|ABZ78457.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4]
Length = 310
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 175/306 (57%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ D AVHS KD+P + +GL + RED RD F+S+T ++++D
Sbjct: 59 KGLFVKELEVAMLEGKADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL G+V DG + +GN+ DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|325927040|ref|ZP_08188311.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118]
gi|325542591|gb|EGD14062.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118]
Length = 304
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D +GR AQ +
Sbjct: 242 VPVAAFARWEGQGLFLQGMVGSASDGRLIH-ADAHGSAEDTEALGRRVAQGL 292
>gi|288818572|ref|YP_003432920.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|288787972|dbj|BAI69719.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|308752163|gb|ADO45646.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
Length = 304
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 172/288 (59%), Gaps = 6/288 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L + H + ++ ++T GD+I + L +IGGKGLF
Sbjct: 3 LRIGTRKSKLALWQANFVKEKLEKMG----HQVDLVHITTSGDKILDVPLAKIGGKGLFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ EID AVHS KD+P L +GL+I A RE+ DV IS L++L ++
Sbjct: 59 KEIEEALMKKEIDLAVHSLKDVPMNLPEGLKIGAVTERENPFDVLISKDHLPLEELPSNA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ + R R D+ V RG ++TR+ KL+ HA++LAYAG+KR+ E I
Sbjct: 119 KVGTSSLRRQVQIKRRRGDLRVEMLRGNVDTRIRKLDEGLYHAVILAYAGVKRMGLEDRI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L EDF P+ GQG++ IE ++ +E+V +H ++ CERAFL EL G C+
Sbjct: 179 TQVL--EDFIPAVGQGSLAIEIRQDDSAVEEIVSCFDHYESRLRAECERAFLRELQGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
I +++ +G T++ G V +G F E R+G +A IG+ A
Sbjct: 237 VPIGAYSWIEGDTIFIKGFVSDLEGIKFIEGMRSGEAKEAQQIGKSLA 284
>gi|148978777|ref|ZP_01815157.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3]
gi|145962198|gb|EDK27482.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3]
Length = 326
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 168/285 (58%), Gaps = 2/285 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 20 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 78 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQG 137
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+
Sbjct: 138 AVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 197
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C
Sbjct: 198 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLEGGC 257
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ I ++ G ++ +V DG +G R DA +G
Sbjct: 258 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGPRKDAEALG 302
>gi|322834934|ref|YP_004214961.1| porphobilinogen deaminase [Rahnella sp. Y9602]
gi|321170135|gb|ADW75834.1| porphobilinogen deaminase [Rahnella sp. Y9602]
Length = 313
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 169/296 (57%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A +S LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAQYVQSRLMACH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYASLAD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGSIVGTSSLRRQCQLRQKRPDLMIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L E+ P+ GQGA+ IE +++ ++L+ + H +T V ERA L
Sbjct: 179 LENRITYALTPEECLPAVGQGAVGIECRLDDQTTRDLLAPLAHRETTLRVQAERAMNMRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I +A +G L+ +V A DG R G +A +G D A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDELWLRALVGAPDGSQMVCGERRGPAANAHRMGVDLAEEL 294
>gi|167644091|ref|YP_001681754.1| porphobilinogen deaminase [Caulobacter sp. K31]
gi|189042878|sp|B0T287|HEM3_CAUSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167346521|gb|ABZ69256.1| porphobilinogen deaminase [Caulobacter sp. K31]
Length = 318
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 162/275 (58%), Gaps = 6/275 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-----IIPLSTKGDRITNRTL 55
M ++P RIG R S L+LA + ++ + P + + +IP+ T GDRI +R L
Sbjct: 1 MSRQPIRIGARGSKLSLAQSGLMQARIAAALGAGPGDDIDAFAQLIPIVTSGDRIQDRRL 60
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
EIGGKGLFT+EIE+ L+ G IDCA+HS KDMP +L GL ++A RED RD FISH A
Sbjct: 61 MEIGGKGLFTKEIEEALLDGRIDCAIHSLKDMPAELPPGLVLAAVPEREDPRDAFISHVA 120
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+ L+DL+ + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +G
Sbjct: 121 ERLEDLSKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQSG 180
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + L+ PP+PGQGA+ IET + L + + + T +V ER
Sbjct: 181 LNRLGLGHITNSWLDPLAAPPAPGQGALVIETRAEDVDLPWL-QAVRCQATTLAVAAERG 239
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L L+GSC++A+ A G L L DG
Sbjct: 240 ALYALEGSCRTAVGAHARLDGLILTMIVEALTPDG 274
>gi|153803403|ref|ZP_01957989.1| porphobilinogen deaminase [Vibrio cholerae MZO-3]
gi|124121060|gb|EAY39803.1| porphobilinogen deaminase [Vibrio cholerae MZO-3]
Length = 311
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|182677009|ref|YP_001831155.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632892|gb|ACB93666.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 337
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 162/275 (58%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLALA A E L H + I + T GD I +R L+ GGKGLFT
Sbjct: 19 LRLGTRGSPLALAQAHELADRLARAHGFAKEAVAITIIRTSGDMIQDRPLSLAGGKGLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ LI G +D AVHSAKD+PT L + L I+ YLPRED+RDV+IS A +DL S
Sbjct: 79 KELDQALIEGMVDLAVHSAKDLPTILPEDLIIAGYLPREDVRDVWISPKAGHPRDLPPGS 138
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT+SLRR ALL R R D+ V RG +ETRL KL + A LLA AG++RL
Sbjct: 139 VVGTASLRRGALLKRLRPDLEVRLLRGNVETRLAKLAAGEVDATLLALAGLRRLGLADKA 198
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L IEDF P+ GQGAI I T ++ L+ I T ++ ER FL LDGSCK
Sbjct: 199 TQVLAIEDFLPAAGQGAIGITTRRDDAATLALLAPILDPATHVALAAERGFLTVLDGSCK 258
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ I A + + GIVL DG + E +G
Sbjct: 259 TPIGAHATVEHDQVTLRGIVLRPDGSEWFEACESG 293
>gi|21241393|ref|NP_640975.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str.
306]
gi|23821681|sp|Q8PPR3|HEM3_XANAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21106726|gb|AAM35511.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str.
306]
Length = 304
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + +L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVADALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRVCVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D +GR AQ +
Sbjct: 242 VPVAAFARWEGQDLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292
>gi|229515846|ref|ZP_04405304.1| porphobilinogen deaminase [Vibrio cholerae TMA 21]
gi|229527138|ref|ZP_04416532.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)]
gi|229335369|gb|EEO00852.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)]
gi|229347109|gb|EEO12070.1| porphobilinogen deaminase [Vibrio cholerae TMA 21]
Length = 317
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|327483021|gb|AEA77428.1| Porphobilinogen deaminase [Vibrio cholerae LMA3894-4]
Length = 311
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|150387913|ref|YP_001317962.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF]
gi|229836103|sp|A6TJD5|HEM3_ALKMQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|149947775|gb|ABR46303.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF]
Length = 316
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 162/268 (60%), Gaps = 2/268 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +IG+R S LAL A + L + K P + II ++T GDRI ++TL +IGGKGL
Sbjct: 2 RTIKIGSRASQLALVQAEIIINMLKE--KFPQYTYEIIKITTLGDRILDKTLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+K L +ID A+HS KDMP + + L + A RED RDV I+ +SL++L
Sbjct: 60 FVKEIQKALAEEKIDLAIHSMKDMPGETPEELVLGAITKREDPRDVLITRENKSLEELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+VIG+SSLRR+A ++ R DI V+ RG + TRL K+ ++LA AG+ RL ++
Sbjct: 120 GAVIGSSSLRRQAQVMALRGDIKVVPIRGNVGTRLGKIETESLDGVILAAAGLNRLGLKE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I L IEDF P+ GQGA+ E + + E++ INHE+T+ V ERAFL L+G
Sbjct: 180 KISSYLEIEDFTPAVGQGALGCEARRKDIEMLEMLLAINHEETYRCVMAERAFLKLLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C I + +G L+ G+V +SDG+
Sbjct: 240 CHVPIGAYGQQQGQELHMTGMVASSDGR 267
>gi|163803631|ref|ZP_02197496.1| porphobilinogen deaminase [Vibrio sp. AND4]
gi|159172579|gb|EDP57439.1| porphobilinogen deaminase [Vibrio sp. AND4]
Length = 312
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 167/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQSAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++ DL
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPIDFPDGLGLVTICEREDPRDAFVSNTYNNIDDL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + ++L++ +NH DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRIDDERLRKLLEPLNHRDTADRVRCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I ++ G ++ +V DG + +G+R DA +G
Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIHGHRNDAEALG 288
>gi|262172879|ref|ZP_06040557.1| porphobilinogen deaminase [Vibrio mimicus MB-451]
gi|261893955|gb|EEY39941.1| porphobilinogen deaminase [Vibrio mimicus MB-451]
Length = 311
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|251787830|ref|YP_003002551.1| porphobilinogen deaminase [Dickeya zeae Ech1591]
gi|247536451|gb|ACT05072.1| porphobilinogen deaminase [Dickeya zeae Ech1591]
Length = 322
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 163/284 (57%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L D H P + ++P+ T+GD + + L ++GGKGLF
Sbjct: 16 LRIATRQSPLALWQAHFVKQRLEDCH--PGLQVELVPMVTRGDVLLDTPLAKVGGKGLFV 73
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L DL +
Sbjct: 74 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYATLDDLPEGA 133
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L +R D+ V D RG + TRL+KL+N AI+LA AG+KRL I
Sbjct: 134 CVGTSSLRRQCQLRAYRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLAHRI 193
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E P+ GQGA+ +E +++ + + L+ +NHEDT V ERA L+G C+
Sbjct: 194 RTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHEDTATRVLAERAMNTRLEGGCQ 253
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A + TLY +V A DG R G+R DA +G
Sbjct: 254 VPIGSYAELQDETLYLRALVGAPDGSRIIYAERRGSRQDAETLG 297
>gi|78046235|ref|YP_362410.1| porphobilinogen deaminase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|123771497|sp|Q3BXV3|HEM3_XANC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78034665|emb|CAJ22310.1| hydroxymethylbilane synthase HemC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 304
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEMLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIYSLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D +GR AQ +
Sbjct: 242 VPVAAFARWEGQGLFLQGMVGSASDGRLIH-ADAHGSAEDTEALGRRVAQGL 292
>gi|86148167|ref|ZP_01066465.1| porphobilinogen deaminase [Vibrio sp. MED222]
gi|218710949|ref|YP_002418570.1| porphobilinogen deaminase [Vibrio splendidus LGP32]
gi|254800262|sp|B7VMD9|HEM3_VIBSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85834014|gb|EAQ52174.1| porphobilinogen deaminase [Vibrio sp. MED222]
gi|218323968|emb|CAV20330.1| Porphobilinogen deaminase [Vibrio splendidus LGP32]
Length = 312
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 168/285 (58%), Gaps = 2/285 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+
Sbjct: 124 AVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ I ++ G ++ +V DG +G R DA +G
Sbjct: 244 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALG 288
>gi|197106866|ref|YP_002132243.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1]
gi|238058996|sp|B4RC21|HEM3_PHEZH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|196480286|gb|ACG79814.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1]
Length = 320
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 166/283 (58%), Gaps = 15/283 (5%)
Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-------IIPLSTKGDRITN 52
M +P RIG R S L+L + + + + P N +IP++T GDR+ +
Sbjct: 1 MPTQPVVRIGARGSKLSLTQSGIVQRRIAAALGVDPDNAAEVERVAPLIPITTTGDRVQD 60
Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L +GL I+A RED RD FIS
Sbjct: 61 RRLLEIGGKGLFTKEIEEALMDGRIDCAVHSMKDMPAELPEGLCIAAIPEREDPRDAFIS 120
Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172
+ L+DL +++GT+SLRR+A L R D+ RG +ETRL KL + AILLA
Sbjct: 121 RGPERLEDLTEGAILGTASLRRQAQCLHRRPDLEAKLLRGNVETRLGKLEAGEYDAILLA 180
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN---PKAQELVKVINHEDTWDS 229
Y+G++RL + K +++ ++ PP+PGQGA+ +ET + P AQ L T +
Sbjct: 181 YSGLRRLGLGHLPKSLIDPKEAPPAPGQGALAVETRAADRDLPWAQAL----RCRPTTLA 236
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
V ER L L+GSC++ I A+ +G T L+ DGK+
Sbjct: 237 VAAERGALIALEGSCRTPIGAHAWLEGGTCKLIVEALSPDGKL 279
>gi|258623142|ref|ZP_05718154.1| porphobilinogen deaminase [Vibrio mimicus VM573]
gi|258584625|gb|EEW09362.1| porphobilinogen deaminase [Vibrio mimicus VM573]
Length = 326
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 16 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 74 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 134 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 194 LESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 254 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 313
Query: 301 NKNVFN 306
K +
Sbjct: 314 AKEILE 319
>gi|262375167|ref|ZP_06068401.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145]
gi|262310180|gb|EEY91309.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145]
Length = 310
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 166/286 (58%), Gaps = 2/286 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L D+H + ++ T+GD+I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQAEHIRARLQDLHA--GLQVELVTFVTQGDKILDTPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+T S ++L
Sbjct: 63 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNTYTSFEELPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL +
Sbjct: 123 GAKVGTSSLRRKTQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L E P+ GQGA+ +E ++ +L++ + H DT V ERAF A L+G
Sbjct: 183 RIRHTLTPEVSLPAVGQGALGLECRTHDQTVLDLIQPLLHADTDACVRAERAFNAYLEGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C+ IAG+A K + G V + DG + + G DA +G
Sbjct: 243 CQVPIAGYATLKEGVISIEGRVGSIDGAVLLRAQQTGKTADAEQLG 288
>gi|289664026|ref|ZP_06485607.1| porphobilinogen deaminase [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 304
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D +GR AQ +
Sbjct: 242 VPVAAFARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292
>gi|253690341|ref|YP_003019531.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259646261|sp|C6DHC2|HEM3_PECCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|251756919|gb|ACT14995.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 313
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 165/284 (58%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 IRIATRQSPLALWQARYVQQCLN--HLYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ L S
Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL E+ I
Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E+ P+ GQGAI IE +N+ + ++L+ +NH T V ERA L+G C+
Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A +G TL+ +V A DG R GN DA IG
Sbjct: 244 VPIGSYAELEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIG 287
>gi|84393564|ref|ZP_00992318.1| porphobilinogen deaminase [Vibrio splendidus 12B01]
gi|84375843|gb|EAP92736.1| porphobilinogen deaminase [Vibrio splendidus 12B01]
Length = 312
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 167/285 (58%), Gaps = 2/285 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P KGL + RED RD F+S+T ++ +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYNNIDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+
Sbjct: 124 AAVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ I ++ G ++ +V DG +G R DA +G
Sbjct: 244 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALG 288
>gi|261210172|ref|ZP_05924469.1| porphobilinogen deaminase [Vibrio sp. RC341]
gi|260840712|gb|EEX67261.1| porphobilinogen deaminase [Vibrio sp. RC341]
Length = 311
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKSARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLEQG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|269961540|ref|ZP_06175903.1| porphobilinogen deaminase [Vibrio harveyi 1DA3]
gi|269833769|gb|EEZ87865.1| porphobilinogen deaminase [Vibrio harveyi 1DA3]
Length = 312
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 167/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHYVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I ++ G ++ +V DG + G+R DA +G
Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALG 288
>gi|145346959|ref|XP_001417948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578176|gb|ABO96241.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 325
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 174/303 (57%), Gaps = 4/303 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR SPLALA A+ TR L + + + I + T GD++ ++ L +IGGKGLF
Sbjct: 13 KIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKGLF 72
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL L
Sbjct: 73 TRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLSQLPEG 132
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ +
Sbjct: 133 AVVGTASLRRQSQLLYKFPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLAQH 192
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
K I+ E+ P+ QGAI I + K + +NHEDT +V ER+FLA LDGSC
Sbjct: 193 AKVIIPTEEMLPAVAQGAIGITCRAGDDKQLAFLAKLNHEDTRMAVEGERSFLAALDGSC 252
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISNK 302
++ IA + + F G++ + DGK E +R G + ++ G+DA ++ +
Sbjct: 253 RTPIAAHCHLVDGKMQFRGLIASLDGKQVLETTREGAWDAASLLDAGKDAGAELKGKAPA 312
Query: 303 NVF 305
+ F
Sbjct: 313 DFF 315
>gi|229520088|ref|ZP_04409516.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80]
gi|229342876|gb|EEO07866.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80]
Length = 317
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDAILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|332304814|ref|YP_004432665.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172143|gb|AEE21397.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 309
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 172/296 (58%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG
Sbjct: 1 MSDRVIRIATRKSTLAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T ++++
Sbjct: 59 KGLFIKELEIAMSEGRADIAVHSMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+++ D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L
Sbjct: 179 MQERIKAYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I +A G LY G+V + DG + + + G+ DA +IG D A+ +
Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSLLLQAEKRGSINDAQSIGIDVAEQL 294
>gi|292486675|ref|YP_003529545.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430]
gi|292897912|ref|YP_003537281.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946]
gi|291197760|emb|CBJ44855.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946]
gi|291552092|emb|CBA19129.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430]
gi|312170741|emb|CBX79003.1| Porphobilinogen deaminase [Erwinia amylovora ATCC BAA-2158]
Length = 313
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 167/289 (57%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PRLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELENAMLSGHADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNHYASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPAGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ + L+ +NH+DT V+ ERA L
Sbjct: 179 LSGRIRQVMPAEESLPAVGQGAVGIECRLDDMRTIGLLAALNHDDTACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G L+ G+V + DG R G+R DA +G
Sbjct: 239 EGGCQVPIGSYALLEGDRLWLRGLVGSPDGSQMVRGERRGSRADAEKMG 287
>gi|229593301|ref|YP_002875420.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25]
gi|259646262|sp|C3K424|HEM3_PSEFS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229365167|emb|CAY53424.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25]
Length = 313
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + L+K ++H DT V ERA L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSDIHALLKPLDHHDTEVRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G L+ G+V +G G +CDA +G AQ +
Sbjct: 239 NGGCQVPIACYAVLEGENLWLRGLVGDPEGGNLLTAEVRGPQCDATALGIQVAQAL 294
>gi|308803813|ref|XP_003079219.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri]
gi|116057674|emb|CAL53877.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri]
Length = 441
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 173/305 (56%), Gaps = 8/305 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMD----VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIGTR SPLALA A+ TR L + + + I II T GD++ ++ L +IGGKG
Sbjct: 48 RIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICII--KTTGDKVLDQPLADIGGKG 105
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL DL
Sbjct: 106 LFTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLDDLP 165
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+
Sbjct: 166 EGAVVGTASLRRQSQLLYKYPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLA 225
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ K I+ E P+ QGAI I + K + +NHEDT +V ERAFLA LDG
Sbjct: 226 QHAKLIIPTEQMLPAVAQGAIGITCRGGDDKQLAFLAKLNHEDTRMAVEGERAFLAALDG 285
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300
SC++ IA + + F G++ + DGK E +R G + + G DA ++ +
Sbjct: 286 SCRTPIAAHCHNVDGKMQFRGLIASLDGKEVLETTREGAWDAASLLAAGTDAGAELKGKA 345
Query: 301 NKNVF 305
+ F
Sbjct: 346 PADFF 350
>gi|37528461|ref|NP_931806.1| porphobilinogen deaminase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|55976477|sp|Q7MYN1|HEM3_PHOLL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|36787899|emb|CAE17016.1| porphobilinogen deaminase (PBG) (hydroxymethylbilane synthase)
(HMBS) (pre-uroporphyrinogen synthase) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 313
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L +IGG
Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQCH--PDLEVQLVPMVTQGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ V D RG + TRLNKL+N AI+LA AG+KRLK
Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLDNGHYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IE +++ + Q L+ +NH DT V ERA L
Sbjct: 179 LHERIRTPLTAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I +A + ++ +V A DG + R DA G + A+ +
Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTALPKDACQAGVELAEEL 294
>gi|194336060|ref|YP_002017854.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1]
gi|238058995|sp|B4SFI2|HEM3_PELPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194308537|gb|ACF43237.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1]
Length = 313
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 159/270 (58%), Gaps = 2/270 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPELDITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT GL I+++ RED RDV IS LKDL
Sbjct: 60 LFTKDIEKHLITKEIDLAVHSLKDVPTATPDGLIITSFTEREDTRDVIISKNGVKLKDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ + D RG + TR K +N + A++LAYAG+ RL
Sbjct: 120 QNAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDNGEFDAMMLAYAGVFRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+V+++NH T ERA L L G
Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
C+ I +A K TL V + DGKI
Sbjct: 240 GCQIPIGAYASFKNGTLTLLAYVGSVDGKI 269
>gi|301062020|ref|ZP_07202731.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2]
gi|300443871|gb|EFK07925.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2]
Length = 316
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 172/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + + L H ++ +I + T GD+I + L++IGGKGLF
Sbjct: 3 IRIGTRGSKLALTQSEWIKEQLEIRHS--GIHVDLIKIKTTGDKILDTPLSKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHS KD+P +L + L +S + PRED D I+ + L L +
Sbjct: 61 KEIEEALLQNRIDVAVHSMKDVPAELPEALMLSTFPPREDPSDALIAQENRRLDQLPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A LL R D++++ RG ++TRL KL + + A++LA AG+ RL VI
Sbjct: 121 RVGTSSLRRGAQLLHLRPDLTLVPLRGNVDTRLGKLKSGEVEAVILATAGLNRLGLSGVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ +E ++ + + +NH+DT +V ER FL L+G C+
Sbjct: 181 TQRIPFHQLLPAVGQGALGLEVRRDDRETIRRLDFLNHDDTRTAVTAERGFLKTLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYI 296
IAGFA G L F G+V DG +I+ E++ G+R DA IG +AA+ +
Sbjct: 241 VPIAGFAQIVGDNLSFEGLVAELDGSRIYKEIA-TGSRDDAEKIGIEAAKTL 291
>gi|218781846|ref|YP_002433164.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01]
gi|218763230|gb|ACL05696.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01]
Length = 310
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 171/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLAL A E ++L++ + P ++ + TKGD+I + L ++GGKGLF
Sbjct: 7 IKIGTRGSPLALWQA-EHVAALLE-RRNPNVKTELVVIKTKGDKILDVPLAKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G D AVHS KD+P++ GL ++A + RED RD I A+ L DL ++
Sbjct: 65 KEIEESLLDGRTDMAVHSMKDVPSEFPPGLCLAAIMEREDPRDALICSRAKGLLDLPPNA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR A LL D+ + RG I TRL+KL + AI+LA AG+KR+ + +
Sbjct: 125 KIGTSSLRRSAQLLALMPDLQIEPLRGNIGTRLDKLTSLNLDAIVLAAAGVKRMAMDDKV 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E + E P+ GQGA+ IE ++P A L + +NHE T V ERAFL LDG C+
Sbjct: 185 SEYIPEETVLPAVGQGAMGIEIREDDPVAGPLARALNHEPTQVIVTGERAFLKRLDGGCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A KG L G++ DG S +G + DA +G A+ + K V
Sbjct: 245 VPVAAHGRLKGDFLQLTGVIAGVDGTPIFRDSVSGKKEDAKELGVKLAEKLLNAGGKAVL 304
Query: 306 N 306
+
Sbjct: 305 D 305
>gi|153835503|ref|ZP_01988170.1| porphobilinogen deaminase [Vibrio harveyi HY01]
gi|156972662|ref|YP_001443569.1| porphobilinogen deaminase [Vibrio harveyi ATCC BAA-1116]
gi|166217790|sp|A7MXU9|HEM3_VIBHB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148867929|gb|EDL67139.1| porphobilinogen deaminase [Vibrio harveyi HY01]
gi|156524256|gb|ABU69342.1| hypothetical protein VIBHAR_00314 [Vibrio harveyi ATCC BAA-1116]
Length = 312
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 167/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I ++ G ++ +V DG + G+R DA +G
Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALG 288
>gi|16124327|ref|NP_418891.1| porphobilinogen deaminase [Caulobacter crescentus CB15]
gi|221233009|ref|YP_002515445.1| porphobilinogen deaminase [Caulobacter crescentus NA1000]
gi|24211766|sp|Q9ABZ8|HEM3_CAUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800240|sp|B8GXG1|HEM3_CAUCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|13421169|gb|AAK22059.1| porphobilinogen deaminase [Caulobacter crescentus CB15]
gi|220962181|gb|ACL93537.1| porphobilinogen deaminase [Caulobacter crescentus NA1000]
Length = 322
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 160/276 (57%), Gaps = 9/276 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP--------HNIVIIPLSTKGDRITNRT 54
+ P RIG R S L+LA + ++ + +P +IP+ T GDRI +R
Sbjct: 4 QPPIRIGARGSKLSLAQSGLMQARIAHALGVPAGASKDEIEAAAPLIPIVTSGDRIQDRR 63
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FISH
Sbjct: 64 LMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFISHV 123
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+ L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +
Sbjct: 124 CERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQS 183
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ RL + + L+ + PP+PGQGA+ IET + A L + + T +V ER
Sbjct: 184 GLNRLGLGHLTRSWLDPDACPPAPGQGALVIETRAEDIGAPWL-EAVRCRQTTIAVAAER 242
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L L+GSC++AI A G+ L L DG
Sbjct: 243 GALLALEGSCRTAIGARAILDGARLSMIVEALTPDG 278
>gi|262404857|ref|ZP_06081411.1| porphobilinogen deaminase [Vibrio sp. RC586]
gi|262348941|gb|EEY98080.1| porphobilinogen deaminase [Vibrio sp. RC586]
Length = 311
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 171/307 (55%), Gaps = 4/307 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYVKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C+ I +A G ++ +V DG +I H R G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDDIWLRALVGEPDGSQIVHGEIR-GPRSEAEQLGITLAEQLLEQ 297
Query: 300 SNKNVFN 306
K +
Sbjct: 298 GAKEILE 304
>gi|166710503|ref|ZP_02241710.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 304
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 172/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAVLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D ++GR AQ +
Sbjct: 242 VPVAAFARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTEDLGRRVAQGL 292
>gi|163748699|ref|ZP_02155952.1| porphobilinogen deaminase [Shewanella benthica KT99]
gi|161331809|gb|EDQ02613.1| porphobilinogen deaminase [Shewanella benthica KT99]
Length = 309
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ +S+ D
Sbjct: 59 KGLFVKELEVAILEDRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIGD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ +ID RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRGMRPDLKIIDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ ED P+ GQGA+ IE +N + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISTEDSLPANGQGAVGIECRTDNERVKALLAPLEHAETRFRVTAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G TL G+V DG + G + DA IG A+ +
Sbjct: 239 EGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTCVGPKTDAKAIGIALAEELLGKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|328472411|gb|EGF43277.1| porphobilinogen deaminase [Vibrio parahaemolyticus 10329]
Length = 312
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 165/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I +A +G ++ +V DG G+R D +G
Sbjct: 241 GGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALG 288
>gi|254230107|ref|ZP_04923503.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|262392880|ref|YP_003284734.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|151937352|gb|EDN56214.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|262336474|gb|ACY50269.1| porphobilinogen deaminase [Vibrio sp. Ex25]
Length = 312
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 166/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I +A G ++ +V DG G+R D +G
Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALG 288
>gi|261823396|ref|YP_003261502.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163]
gi|261607409|gb|ACX89895.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163]
Length = 313
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 167/284 (58%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 IRIATRQSPLALWQARYVQQRLN--HLYPDLSVELVPMVTRGDIILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL L S
Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQLPQGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E+ I
Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEERI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L+G C+
Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A +G+TL+ +V A DG R G+ DA IG
Sbjct: 244 VPIGSYAELEGNTLWLRALVGAPDGSQMIVGERKGSVVDAEKIG 287
>gi|260774857|ref|ZP_05883759.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609282|gb|EEX35437.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450]
Length = 312
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 167/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAYYVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYANIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ + +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I ++ G ++ +V DG G+R DA +G
Sbjct: 241 GGCQVPIGSYSLLDGDDIWLRALVGEPDGSKIVRGEIKGSRADAEKLG 288
>gi|94498044|ref|ZP_01304607.1| porphobilinogen deaminase [Sphingomonas sp. SKA58]
gi|94422479|gb|EAT07517.1| porphobilinogen deaminase [Sphingomonas sp. SKA58]
Length = 313
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 157/276 (56%), Gaps = 5/276 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR SPLALA A T +L+ H I I+ + T GDRI +R L +IGGK L
Sbjct: 11 RPLRLGTRGSPLALAQARLTAQALIAAHGWSADAIEIVTVQTSGDRIQDRALADIGGKAL 70
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+T+E+++ L++GE D +VHS KD+ T I+A LPR D RD I A S L
Sbjct: 71 WTKELDRALVAGETDLSVHSMKDVETVRHDIFHIAAMLPRADPRDKLIG--AASFDALPP 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ ++GTSS RR A + R R D ++ FRG + TRL KL + HA LLA AG+ RL +
Sbjct: 129 NPIVGTSSPRRGAQVKRLRPDATITLFRGNVATRLAKLAAGEVHATLLAAAGLDRLDQGN 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V I+ ++ P+P QGA+ IE N E V INH DT+D+V ERA L L G+
Sbjct: 189 V-GTIIPVDTMLPAPSQGAVGIEILAGNAPVIEAVAAINHRDTFDTVMMERAVLRGLGGT 247
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
C S IA A G L +++ DG+ VS N
Sbjct: 248 CHSPIAALALVDGDDLMLRAEIISPDGQ--ETVSEN 281
>gi|289667461|ref|ZP_06488536.1| porphobilinogen deaminase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 304
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 171/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D +GR AQ +
Sbjct: 242 VPVAAFARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292
>gi|320354663|ref|YP_004196002.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032]
gi|320123165|gb|ADW18711.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032]
Length = 319
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 172/301 (57%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ + ++ + H P + ++ ++TKGDRI + L ++GGKGLF
Sbjct: 5 LRIGTRASLLAVTQSTWVKTQIEQAH--PGTRVELVKITTKGDRILDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++GE+D AVHS KD+PT+L +GL I RE D F+S T +L DL +
Sbjct: 63 KEIEDALLAGEVDLAVHSMKDVPTELPEGLHIGVIPVRETPYDAFLSKTCTTLADLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRRK+ L+ R D+ ++D RG I+TRL KL+ AI+LA AG++RL E I
Sbjct: 123 TIGTSSLRRKSQLMALRPDLDIVDLRGNIDTRLRKLDEGVYDAIILAGAGLRRLHLEHRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L P+ QGA+ IE ++ + + ++ ++H +T +V ERAFL L+G C+
Sbjct: 183 TALLEPTQMLPAISQGALGIELRQDDTELADGLRFLHHGETAVAVEAERAFLLRLEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA A ++ G++ + DG+ + + G A +G AQ + K +
Sbjct: 243 VPIAAHATLDSGSVTLTGLIASVDGRQILKEATTGPAEQAARLGAQLAQTLLDRGGKAIL 302
Query: 306 N 306
+
Sbjct: 303 D 303
>gi|258626632|ref|ZP_05721462.1| porphobilinogen deaminase [Vibrio mimicus VM603]
gi|258581136|gb|EEW06055.1| porphobilinogen deaminase [Vibrio mimicus VM603]
Length = 311
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLVPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|27364543|ref|NP_760071.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6]
gi|37678265|ref|NP_932874.1| porphobilinogen deaminase [Vibrio vulnificus YJ016]
gi|33301181|sp|Q8DD85|HEM3_VIBVU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|55976475|sp|Q7MQC7|HEM3_VIBVY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|27360662|gb|AAO09598.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6]
gi|37197004|dbj|BAC92845.1| porphobilinogen deaminase [Vibrio vulnificus YJ016]
Length = 312
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 2/285 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+
Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ I +A +G ++ +V DG G R A +G
Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLG 288
>gi|91227534|ref|ZP_01261871.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01]
gi|91188558|gb|EAS74850.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01]
Length = 312
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 165/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PSLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 61 GLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I +A G ++ +V DG G+R D +G
Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALG 288
>gi|320154944|ref|YP_004187323.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O]
gi|319930256|gb|ADV85120.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O]
Length = 312
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 2/285 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+
Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHTDTADRVKCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ I +A +G ++ +V DG G R A +G
Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLG 288
>gi|323500165|ref|ZP_08105110.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326]
gi|323314794|gb|EGA67860.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326]
Length = 312
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 166/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSSPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T S+ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPSGLGLVTICEREDPRDAFVSNTYNSIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I +A +G ++ +V DG G R ++ +G
Sbjct: 241 GGCQVPIGSYALLEGDDIWLRALVGEPDGSQIVRGEIKGPRSESEALG 288
>gi|310766129|gb|ADP11079.1| porphobilinogen deaminase [Erwinia sp. Ejp617]
Length = 313
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 167/289 (57%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ L+ +NH++T V+ ERA L
Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLDDMHTIGLLAALNHDETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G L+ G+V + DG R G+R DA +G
Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMG 287
>gi|269964925|ref|ZP_06179095.1| porphobilinogen deaminase [Vibrio alginolyticus 40B]
gi|269830401|gb|EEZ84625.1| porphobilinogen deaminase [Vibrio alginolyticus 40B]
Length = 312
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 165/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 61 GLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I +A G ++ +V DG G+R D +G
Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALG 288
>gi|332290269|ref|YP_004421121.1| porphobilinogen deaminase [Gallibacterium anatis UMN179]
gi|330433165|gb|AEC18224.1| porphobilinogen deaminase [Gallibacterium anatis UMN179]
Length = 309
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K RI TR SPLAL A + L ++ P + ++ + TKGD + + L +IGG
Sbjct: 1 MQKDVLRIATRQSPLALWQANYIKHKLQVLY--PQLTVELVTMVTKGDVLLDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + +GL +S RED RD F+S+ SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPMQFPQGLHLSVICEREDPRDAFVSNRYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++V+GTSSLRR+ L R DI + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQNAVVGTSSLRRQCQLKALRPDIELKTLRGNVGTRLRKLDEGEYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I+ + E P+ GQGA+ +E ++ +L+K + H+DTWD V ERA L
Sbjct: 179 EQQRIRSFIAPEVSLPAVGQGAVGVECRQDDEWVNQLLKPLLHQDTWDRVIAERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ IAG+A G L+ +V A DG R A +G A+ +
Sbjct: 239 QGGCQVPIAGYAILDGEQLFLRALVGAVDGSKVLRAEATAVRSQAEQLGIQVAEML 294
>gi|50123108|ref|YP_052275.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043]
gi|55976381|sp|Q6CZG3|HEM3_ERWCT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49613634|emb|CAG77085.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043]
Length = 313
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 166/284 (58%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 IRIATRQSPLALWQARYVQQCLN--HFYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ L S
Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL E+ I
Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L+G C+
Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A +G TL+ +V A DG R G+ DA IG
Sbjct: 244 VPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGSVSDAEKIG 287
>gi|294142612|ref|YP_003558590.1| porphobilinogen deaminase [Shewanella violacea DSS12]
gi|293329081|dbj|BAJ03812.1| porphobilinogen deaminase [Shewanella violacea DSS12]
Length = 309
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+ +S+ D
Sbjct: 59 KGLFVKELEIAMLDGRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPKGAVVGTSSLRRQCQIRAMRPDLKITDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERISSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHTETRYRVTAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I FA +G TL G+V DG + G + DA IG A+ +
Sbjct: 239 QGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTSVGPKTDAKAIGITLAKELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|259906881|ref|YP_002647237.1| porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96]
gi|224962503|emb|CAX53958.1| Porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96]
gi|283476674|emb|CAY72503.1| hemC [Erwinia pyrifoliae DSM 12163]
Length = 313
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 166/289 (57%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE + + L+ +NH++T V+ ERA L
Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLEDMHTIGLLAALNHDETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G L+ G+V + DG R G+R DA +G
Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMG 287
>gi|193212401|ref|YP_001998354.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327]
gi|209572771|sp|P28464|HEM3_CHLP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|193085878|gb|ACF11154.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327]
Length = 312
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 160/269 (59%), Gaps = 2/269 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L + P NI + + T GD + + L++IG G
Sbjct: 2 KKEIIIGTRSSPLALWQAEFTKAEL--SKRFPDMNITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK L++GEID AVHS KD+PT +GL I+++ RED RDV IS + + L DL
Sbjct: 60 LFTKDIEKHLLAGEIDLAVHSLKDVPTGTPEGLVITSFTEREDTRDVIISKSGKGLMDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ ++D RG + TR K + A++LAYAG+ RL+
Sbjct: 120 QNAKMATSSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET ++ + +E+V+V+N ++T ERA L L G
Sbjct: 180 DRITEILPHETMLPAVGQGALGIETRTDDAETREIVRVLNDDNTEMCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C+ I F TL V + DGK
Sbjct: 240 GCQIPIGSFGSYIDGTLKLLAFVGSVDGK 268
>gi|255020135|ref|ZP_05292205.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756]
gi|254970428|gb|EET27920.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756]
Length = 319
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 170/302 (56%), Gaps = 4/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR SPLAL A R+ L+ H P + I+P++T+GDR+ L EIGGKGLF
Sbjct: 17 PLRIGTRASPLALWQAEHVRAGLLRAH--PEIPVEIVPMTTQGDRMLAVPLHEIGGKGLF 74
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ G +D AVHS KD+P + +GL+I+A L RED+RD ++S+T +DL
Sbjct: 75 VKEIEAALLEGTVDLAVHSMKDVPAQQPEGLEIAAILAREDVRDAWVSNTFARPEDLPQG 134
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+G+SSLRR+A LL V+D RG + TRL KL+ I+LA AG+KRL +
Sbjct: 135 GRVGSSSLRRRAQLLHRLPQTVVLDLRGNVATRLRKLDAGDYDGIVLAAAGLKRLGLLER 194
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L E P+ GQGAI +E ++ + + L+K +N T V ER L G C
Sbjct: 195 IRHYLEPELSLPAVGQGAIGVEIRSDDARTRTLLKPLNDPTTSRCVGAERHMNRLLGGDC 254
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A A G+ L G+V + DG+ G+ A ++G AQ + +++
Sbjct: 255 RLPVAALAEADGTGLRLRGLVASPDGRELLRAEAVGSL--AHSVGEQVAQALLAQGAQHI 312
Query: 305 FN 306
+
Sbjct: 313 ID 314
>gi|83945095|ref|ZP_00957461.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633]
gi|83851877|gb|EAP89732.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633]
Length = 320
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 164/266 (61%), Gaps = 3/266 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLA+A + ++ L H K P + I+ ++T GDRIT+R L GGKGLFT
Sbjct: 8 IATRTSPLAMAQTLDVQARLAKAHGEKDPEESFPILGMTTTGDRITDRALLLAGGKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLALH 124
+E+E+ L+ G+ AVHS KD+PT L GL+I+ L RED RD ++ S ++DL
Sbjct: 68 KELERALLDGDARFAVHSMKDVPTTLPDGLEIACVLEREDPRDTLLTRDGISRIEDLPQG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S+RR++ L R D++++ RG ++TRL KLN+ + A LA AG++RL +E+
Sbjct: 128 ATLGTASIRRQSQALALRPDLNIVLLRGNVDTRLEKLNSGEVDATFLARAGLRRLGREQA 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L + P+P QGA+ IE ++ +A++ ++ +NH T ++ ER FL LDGSC
Sbjct: 188 ELPPLELTAVIPAPAQGAVGIEIRSDDVEARKALEPLNHLPTRIAIAAERGFLQALDGSC 247
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
++ IA A +G+ ++ G L DG
Sbjct: 248 RTPIAAHATLEGAEIHLRGEALMPDG 273
>gi|254226598|ref|ZP_04920179.1| porphobilinogen deaminase [Vibrio cholerae V51]
gi|125620870|gb|EAZ49223.1| porphobilinogen deaminase [Vibrio cholerae V51]
Length = 317
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLTPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|78187286|ref|YP_375329.1| porphobilinogen deaminase [Chlorobium luteolum DSM 273]
gi|123757188|sp|Q3B2Z5|HEM3_PELLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78167188|gb|ABB24286.1| Porphobilinogen deaminase [Chlorobium luteolum DSM 273]
Length = 313
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 162/280 (57%), Gaps = 4/280 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPDLEITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS T L DL
Sbjct: 60 LFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 KNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+VKV+NH T ERA L L G
Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSTTEYCCKAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIF--HEVSRNG 280
C+ I +A K TL+ V ++DG I E+++ G
Sbjct: 240 GCQIPIGAYASFKNGTLHLLAFVGSTDGTIGIRDEITKTG 279
>gi|28899762|ref|NP_799367.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|153838754|ref|ZP_01991421.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810]
gi|260365170|ref|ZP_05777735.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030]
gi|260878130|ref|ZP_05890485.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034]
gi|260895813|ref|ZP_05904309.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466]
gi|260900854|ref|ZP_05909249.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037]
gi|32363175|sp|Q87KI9|HEM3_VIBPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28808014|dbj|BAC61251.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|149747840|gb|EDM58724.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810]
gi|308087192|gb|EFO36887.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466]
gi|308092784|gb|EFO42479.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034]
gi|308110595|gb|EFO48135.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037]
gi|308111033|gb|EFO48573.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030]
Length = 312
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 165/288 (57%), Gaps = 2/288 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
G C+ I +A +G ++ +V DG G+R D +G
Sbjct: 241 GGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALG 288
>gi|84625435|ref|YP_452807.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575118|ref|YP_001912047.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|123752694|sp|Q2NYU4|HEM3_XANOM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059004|sp|B2SMV3|HEM3_XANOP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|84369375|dbj|BAE70533.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519570|gb|ACD57515.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 304
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 172/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL ++ I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDERI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A A +G L+ G+V ASDG++ H +G+ D ++GR AQ +
Sbjct: 242 VPVAALARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTEDLGRRVAQGL 292
>gi|153826278|ref|ZP_01978945.1| porphobilinogen deaminase [Vibrio cholerae MZO-2]
gi|149739946|gb|EDM54125.1| porphobilinogen deaminase [Vibrio cholerae MZO-2]
Length = 311
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGALGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|157960202|ref|YP_001500236.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345]
gi|189028157|sp|A8GZG4|HEM3_SHEPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157845202|gb|ABV85701.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345]
Length = 310
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++++D
Sbjct: 59 KGLFVKELEVAMLEGLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL G+V DG S +G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITASSSGSTADAEKLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|188990080|ref|YP_001902090.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. B100]
gi|229846307|sp|B0RNI9|HEM3_XANCB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167731840|emb|CAP50024.1| hydroxymethylbilane synthase [Xanthomonas campestris pv.
campestris]
Length = 304
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 162/270 (60%), Gaps = 3/270 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L GSC
Sbjct: 182 TARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274
+A FA +G L+ G+V ASDG++ H
Sbjct: 242 VPVAAFARWEGEDLFLQGMVGSASDGRLIH 271
>gi|21232940|ref|NP_638857.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766987|ref|YP_241749.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. 8004]
gi|23821678|sp|Q8P536|HEM3_XANCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81307026|sp|Q4UYZ4|HEM3_XANC8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21114777|gb|AAM42781.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66572319|gb|AAY47729.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. 8004]
Length = 304
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 162/270 (60%), Gaps = 3/270 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L GSC
Sbjct: 182 TARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274
+A FA +G L+ G+V ASDG++ H
Sbjct: 242 VPVAAFARWEGEDLFLQGMVGSASDGRLIH 271
>gi|119357593|ref|YP_912237.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266]
gi|158512603|sp|A1BHD6|HEM3_CHLPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119354942|gb|ABL65813.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266]
Length = 313
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 168/280 (60%), Gaps = 4/280 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHYPELDITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS + ++L +L
Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISRSGETLLNLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RLK
Sbjct: 120 QNARIATSSLRRMSQLLSMRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLKFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G
Sbjct: 180 DRISEILPHDVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI--FHEVSRNG 280
C+ I +A K TL V + +GKI +E+++ G
Sbjct: 240 GCQIPIGAYASFKNGTLKLLAFVGSVNGKIGLRNEITKTG 279
>gi|218550973|ref|YP_002384764.1| porphobilinogen deaminase [Escherichia fergusonii ATCC 35469]
gi|226740637|sp|B7LU53|HEM3_ESCF3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218358514|emb|CAQ91161.1| hydroxymethylbilane synthase [Escherichia fergusonii ATCC 35469]
Length = 313
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 166/291 (57%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDELPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A G ++ +V A DG R G+ DA +G A+ +
Sbjct: 244 VPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEEL 294
>gi|160872858|ref|ZP_02062990.1| porphobilinogen deaminase [Rickettsiella grylli]
gi|159121657|gb|EDP46995.1| porphobilinogen deaminase [Rickettsiella grylli]
Length = 311
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 173/308 (56%), Gaps = 5/308 (1%)
Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M KK F RI TR SPLA A ++ L + P I ++P T+GDR ++ +L + G
Sbjct: 1 MSKKKFLRIATRKSPLAYWQATSIKNQLEKI--FPFLKITLLPFVTEGDRPSH-SLNQWG 57
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G+ D AVHS KD+P L KGL + A R D RDV IS + +
Sbjct: 58 GKGLFVKELEAALLHGQADIAVHSLKDLPMTLEKGLVLGAICKRCDPRDVLISRSDRLFT 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L S +GTSSLRR++ LL R D+ + RG I TRLNKL + AI+LA AG+ RL
Sbjct: 118 QLPPGSYVGTSSLRRQSQLLALRPDLKIGVLRGNIGTRLNKLAAGEFDAIILAAAGLIRL 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
KK + I E I+ F P+PGQGA+ IE H N+ ++ + + H T V ERA E
Sbjct: 178 KKTECISEYFEIDHFLPAPGQGALGIECHENDEESLTYISALIHPITHSCVLAERALSRE 237
Query: 240 LDGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C+ +A +A G + V +SDG +V + G R +A IG AAQ +R
Sbjct: 238 LGGGCQVPLAAYAASLGQDFIRLQAFVGSSDGTTQIKVEKQGPRVEAEKIGFLAAQDLRA 297
Query: 299 ISNKNVFN 306
+ + + N
Sbjct: 298 LGVEEILN 305
>gi|324111028|gb|EGC05015.1| porphobilinogen deaminase [Escherichia fergusonii B253]
gi|325499227|gb|EGC97086.1| porphobilinogen deaminase [Escherichia fergusonii ECD227]
Length = 313
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 166/291 (57%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDELPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A G ++ +V A DG R G+ DA +G A+ +
Sbjct: 244 VPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEEL 294
>gi|2495175|sp|Q59684|HEM3_PROMI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|726359|gb|AAC44329.1| porphobilinogen deaminase [Proteus mirabilis]
Length = 313
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 156/271 (57%), Gaps = 2/271 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
+G C+ I +A + ++ +V A DGK
Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGAPDGK 269
>gi|189346422|ref|YP_001942951.1| porphobilinogen deaminase [Chlorobium limicola DSM 245]
gi|238058917|sp|B3EIN1|HEM3_CHLL2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189340569|gb|ACD89972.1| porphobilinogen deaminase [Chlorobium limicola DSM 245]
Length = 313
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 164/280 (58%), Gaps = 4/280 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAELS--RHFPELDITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS L DL
Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGAKLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 LNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G
Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCKAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNG 280
C+ I +A K TL V + DG I +E++R+G
Sbjct: 240 GCQIPIGAYASFKNGTLKLLAFVGSVDGTVGINNEITRSG 279
>gi|116750623|ref|YP_847310.1| porphobilinogen deaminase [Syntrophobacter fumaroxidans MPOB]
gi|158512355|sp|A0LN73|HEM3_SYNFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|116699687|gb|ABK18875.1| hydroxymethylbilane synthase [Syntrophobacter fumaroxidans MPOB]
Length = 309
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 169/296 (57%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR S LAL + ++++ + P + + + T GD+I + L ++GG
Sbjct: 1 MTDRVIRIGTRGSMLALKQSGNVKAAMEALW--PGLRVELQVVRTTGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE L++ +D AVHS KD+P L +GL+I A RED RDV ++ T + + D
Sbjct: 59 KGLFVKEIEDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIAD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + + + R DI + + RG IETRL KL AI+LA AG+ R+
Sbjct: 119 LPMGGRVGTSSLRRASQIRKLRPDIEIANLRGNIETRLRKLTEGAFDAIILAAAGLHRMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + L+ DF P+ GQGAI IE ++ + +EL+ ++ DT +V ER+ L L
Sbjct: 179 WQNRVTSYLDPADFLPAIGQGAIGIELRCDDGEVRELLAPLHDPDTHVAVEAERSLLRTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I G A+ TL G+V + DG+ SR G+ A IGRD +
Sbjct: 239 EGGCQVPIGGHAHLVDGTLTLSGMVASIDGEELFRASRAGSPAQARKIGRDVGMEL 294
>gi|325922553|ref|ZP_08184310.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865]
gi|325546966|gb|EGD18063.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865]
Length = 304
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 172/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A + R D D +S+ +++ L L +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAIMERGDAADALVSNLYATVQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGFDARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L++ ++ P+P QGA+ +E ++ L+ V++ T V ERA L GSC
Sbjct: 182 TARLDVPEWLPAPAQGAVAVECRGDDAHIHGLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L+ G+V ASDG++ H +G+ D ++GR AQ +
Sbjct: 242 VPVAAFARWEGDGLFLQGMVGSASDGRLIH-AEAHGSAEDTESLGRLVAQGL 292
>gi|307293495|ref|ZP_07573339.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1]
gi|306879646|gb|EFN10863.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1]
Length = 308
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L EIGGK L
Sbjct: 6 RPLRLGTRGSPLALAQAHMTIAALRARHGWDEGAVEIVVVQTSGDRIQDRALAEIGGKAL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+T+E+++ L+ GEID AVHS KD+ T ++I+A LPR D+RD + A S L
Sbjct: 66 WTKELDRALLEGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLVG--AASFDALPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
V+GTSS RR A + R R D V+ FRG + TRL KL +AHA LLA AG+ RL +
Sbjct: 124 KPVVGTSSPRRAAQVKRLRPDAGVVLFRGNVATRLAKLEKGEAHATLLAAAGLDRLGQSD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V I E P+P QGA+ IET N +L+ IN DT+D V ERA L L G+
Sbjct: 184 VGVAI-PAEVMLPAPSQGAVGIETLSGNGAMLDLLATINDADTFDCVMAERAVLVGLGGT 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C S IA + +Y +++ DG+
Sbjct: 243 CHSPIAALGRLEEGRIYLRAEIISPDGQ 270
>gi|261250035|ref|ZP_05942612.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891]
gi|260939539|gb|EEX95524.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891]
Length = 312
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 172/305 (56%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALKAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GT SLRR+ L +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+
Sbjct: 121 PQGAIVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDDGQYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA L+
Sbjct: 181 EERIKSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKETADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG G+R DA +G + A +
Sbjct: 241 GGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIIRGEIRGSRADAETLGVELANQLLDDGA 300
Query: 302 KNVFN 306
K +
Sbjct: 301 KEILT 305
>gi|119776386|ref|YP_929126.1| porphobilinogen deaminase [Shewanella amazonensis SB2B]
gi|119768886|gb|ABM01457.1| Hydroxymethylbilane synthase [Shewanella amazonensis SB2B]
Length = 326
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 17 MSQNLIRIATRKSPLAMWQAEFVKAELERIH--PDLTVELLPMSTKGDVILDTPLAKVGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T +S+ +
Sbjct: 75 KGLFVKELEVAMLEGRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKSIDE 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL++ + AI+LA AG+ RLK
Sbjct: 135 LPQGAVVGTSSLRRQCQLRARRPDLIIKDLRGNVGTRLAKLDSGEYDAIILAAAGLIRLK 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H++T V ERA L
Sbjct: 195 LAERIAGFISTEESLPANGQGAVGIECRTNDERVKALLAPLEHKETRLRVLAERAMNTRL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA + TL G+V DG S G+ DAI +G A +
Sbjct: 255 EGGCQVPIGAFAEIEADTLTLRGLVGNPDGSEVITGSVTGSTADAIALGHQLADDLLSRG 314
Query: 301 NKNVFN 306
K + +
Sbjct: 315 AKTILD 320
>gi|189499889|ref|YP_001959359.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1]
gi|238058915|sp|B3EPK0|HEM3_CHLPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189495330|gb|ACE03878.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1]
Length = 313
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 163/278 (58%), Gaps = 4/278 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P I + + T GD + + L++IG G
Sbjct: 2 KKKLIIGTRSSPLALWQADFTQAEL--SKHFPDLEIELKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LISGEID AVHS KD+PT+ +GL +SA+ RED RDV IS +SLK L
Sbjct: 60 LFTKDIEKHLISGEIDLAVHSLKDVPTETPEGLMLSAFTEREDTRDVIISKNGESLKTLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 QDAKIATSSLRRTSQLLSMRPDFQMGDIRGNLNTRFKKFDESDFDAMMLAYAGVHRLNFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ +E+V V+N+ +T ERA L L G
Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEATKEIVSVMNNVNTEFCTKAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSR 278
C+ I +A K L+ V + DGK I +E+++
Sbjct: 240 GCQIPIGSYASLKNGNLHLLAYVGSVDGKRTIRNEITK 277
>gi|325291200|ref|YP_004267381.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271]
gi|324966601|gb|ADY57380.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271]
Length = 305
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 175/303 (57%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LA+ A + SL ++ P + V++P TKGD+I + L +IG KG
Sbjct: 2 KTIRIGTRESKLAIWQAEWVKDSLTSIY--PGIDCVLVPKKTKGDKIPDIPLPKIGDKGF 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FTEE+E+ L++GEID AVHS KD+P +L +GL I+AY R D RDVF L +L
Sbjct: 60 FTEELEQALLTGEIDLAVHSLKDLPVELPQGLSIAAYGERHDPRDVFFGKEGLPLAELPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-ILLAYAGIKRLKKE 182
S+IGTSSLRR+ L R+D++ D RG ++TR +KL N++ A I+LA AG RL +
Sbjct: 120 GSMIGTSSLRRQCQLKYQRADLNFCDLRGNLDTRWDKLQNSRDMAGIVLAAAGALRLGWQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L + P+ GQG I IET + + +++++ +NH + + ER+FL L G
Sbjct: 180 DRITEFLAEDVVLPAVGQGIIAIETASHRTEIRQILQPLNHRPSELAGRAERSFLRSLGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C++ IA A + + G+V DGK +V+ G D G DAA I+ +
Sbjct: 240 GCQTPIAALAKVQEDRIQVTGMVAGMDGKNILKVTAEG--FDPEQTGADAAAQIKCLGAN 297
Query: 303 NVF 305
N+
Sbjct: 298 NLL 300
>gi|118581775|ref|YP_903025.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379]
gi|158512569|sp|A1AUE7|HEM3_PELPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118504485|gb|ABL00968.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379]
Length = 310
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 164/286 (57%), Gaps = 5/286 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR S LAL A +S L + P + + + T GDRI + L ++GG
Sbjct: 1 MPPRQLRIGTRASQLALWQANWVKSELE--KRYPAMEVTLTKIKTMGDRILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD +S A+
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVVSRAAR-FSH 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+LRR+A LL R D+ ++ RG +ETR+ KL+ A++LA AG+KRL
Sbjct: 118 LPPGARVGTSALRRQAQLLHARPDLEMVTIRGNVETRIRKLDEENLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E L++E P+ GQGA+ IE +++P E + NH DT +V ERA L
Sbjct: 178 LTQRVAEYLDVEFSIPAIGQGALGIECRLSDPVVTEAIAFFNHPDTSHAVRAERALLRRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF--HEVSRNGNRCD 284
G C+ IA +G L G++ A DG+ F E+S ++C+
Sbjct: 238 QGGCQVPIAAHGTIRGGELRLVGLIAAVDGREFVRDEISGPVDQCE 283
>gi|77920653|ref|YP_358468.1| porphobilinogen deaminase [Pelobacter carbinolicus DSM 2380]
gi|123756552|sp|Q3A009|HEM3_PELCD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77546736|gb|ABA90298.1| hydroxymethylbilane synthase [Pelobacter carbinolicus DSM 2380]
Length = 315
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL A + L +H P ++V++P++TKGD+I + L ++GG
Sbjct: 1 MSSSALRIGTRASRLALWQAEWVQQQLETLH--PGLSVVLVPITTKGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L G ID AVHS KD+P+ L GL + PRED RD ++ +S
Sbjct: 59 KGLFVKEIEEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL R D+ ++ RG +ETRL K+ I+LA AG+KRL+
Sbjct: 119 LPQGARIGTSALRRQAQLLHRRPDLDIVSLRGNVETRLRKMEEEDMDGIVLAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L+++ P+ GQGA+ +E + + EL+ ++ DT +V ERAFL L
Sbjct: 179 LAERIAEYLSVDVSLPAIGQGALGLECREGDDRTLELIAPLHDADTAVAVRAERAFLRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ +A A TL G+V DG
Sbjct: 239 NGGCQVPLAAHATVAEQTLTMVGLVAEVDG 268
>gi|317494824|ref|ZP_07953235.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917149|gb|EFV38497.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 323
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A+ R L P + ++P+ T+GD + + L ++GGKGLF
Sbjct: 16 LRIATRQSPLALWQAYYVRDHLQ--AHWPDLTVELVPMVTRGDVLLDTPLAKVGGKGLFV 73
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P +GL + RED RD F+S L+DL S
Sbjct: 74 KELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEREDPRDAFVSPKYARLEDLPEGS 133
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ V D RG + TRL KL+N AI+LA AG+KRL+ E+ I
Sbjct: 134 IVGTSSLRRQCQLREIRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAAAGLKRLELEERI 193
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +N+ + Q L+ +N DT V+ ERA L+G C+
Sbjct: 194 RYALPPEQSLPAVGQGAVGIECRLNDTRTQALLAPLNDIDTATRVSAERAMNTRLEGGCQ 253
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ G ++ +V DG + R G R A +G A+ +
Sbjct: 254 VPIGSYSELNGDEIWLRALVGKPDGTLIIRGERRGPRAKAAELGVSLAEEL 304
>gi|227357162|ref|ZP_03841531.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus
mirabilis ATCC 29906]
gi|227162694|gb|EEI47661.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus
mirabilis ATCC 29906]
Length = 313
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 156/273 (57%), Gaps = 2/273 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+G C+ I +A + ++ +V + DGK
Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGSPDGKTI 271
>gi|149191476|ref|ZP_01869725.1| porphobilinogen deaminase [Vibrio shilonii AK1]
gi|148834664|gb|EDL51652.1| porphobilinogen deaminase [Vibrio shilonii AK1]
Length = 329
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 168/295 (56%), Gaps = 2/295 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +P RI TR SPLAL A + +L+ H P + ++ + TKGD I + L ++GGK
Sbjct: 20 QTQPIRIATRKSPLALWQAHYVKDALIAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 77
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 78 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYTNISEL 137
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L R D+ + + RG + TRL KL+N + AI+LA AG+KRL+
Sbjct: 138 PQGAVVGTCSLRRQCQLKEQRPDLVIKELRGNVGTRLGKLDNGEYDAIILAAAGLKRLEL 197
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ + E+ P+ GQGA+ IE +++ + +L++ +NH +T D V CERA L+
Sbjct: 198 ESRIRSFIEPEESLPAVGQGAVGIECRLDDERLIKLLEPLNHTNTADRVLCERAMNLTLE 257
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I ++ G ++ +V DG G R DA +G A +
Sbjct: 258 GGCQVPIGSYSLIDGDEIWLRALVGEPDGSKIVRGEIRGKRADAEALGVQLANQL 312
>gi|294010302|ref|YP_003543762.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S]
gi|292673632|dbj|BAI95150.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S]
Length = 308
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 170/295 (57%), Gaps = 8/295 (2%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L +I
Sbjct: 1 MQKPSRPLRLGTRGSPLALAQAHMTVAALRARHGWDEGAVEIVVVQTSGDRIQDRALADI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGK L+T+E+++ L SGEID AVHS KD+ T ++I+A LPR D+RD + A
Sbjct: 61 GGKALWTKELDRALASGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLVG--ADDF 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L V+GTSS RR A + R R D V+ FRG + TRL +L+ +AHA LLA AG+ R
Sbjct: 119 AALPERPVVGTSSPRRAAQVRRLRPDAQVVLFRGNVATRLARLDRGEAHATLLAAAGLDR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + V I ++ P+P QGA+ IET + +L+ I+ DT+D V ERA LA
Sbjct: 179 LGQGDVGVAI-PVDVMLPAPSQGAVGIETLSGDEAMLDLLAAISDADTFDCVMAERAVLA 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSR--NGNRCDAINIGR 290
L G+C S IA FA + + +++ DG+ E +R G+ A +GR
Sbjct: 238 GLGGTCHSPIAAFARLEDGQVRLRAEIISPDGRETVGETARIERGDAAAAEAMGR 292
>gi|56964395|ref|YP_176126.1| porphobilinogen deaminase [Bacillus clausii KSM-K16]
gi|61213279|sp|Q5WEP5|HEM3_BACSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56910638|dbj|BAD65165.1| porphobilinogen deaminase [Bacillus clausii KSM-K16]
Length = 311
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 168/282 (59%), Gaps = 4/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL L + P+ + + TKGDRI + TL+++GGKGLF +E
Sbjct: 6 IGTRRSKLALTQTNWVIDQLKQLG--VPYEFEVKEIVTKGDRILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L SGEID AVHS KD+P++LL+ ++A RED RDV +S +L +L +++
Sbjct: 64 IEAALRSGEIDVAVHSMKDVPSELLEEFTLAAITEREDPRDVLVSENGHTLDELPAGAIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L R D+ V RG +ETRL KL AI+LA AG+KRL E VI
Sbjct: 124 GTSSLRRSAQILHRRPDVQVKWIRGNVETRLRKLKEEDFSAIVLAAAGLKRLGYGEDVIT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ + P+ GQGA+ +E V++ + EL+ ++HE+T +V ERAFL E++G C+
Sbjct: 184 EYLDKDVCLPAIGQGALGLECRVDDVETTELLAKLHHEETGKAVLAERAFLKEMNGGCQV 243
Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
I G+A + ++ G+V + DGK + + G D +
Sbjct: 244 PIGGYATVLEDGAVFLTGLVGSPDGKTILKEGKCGMVADELG 285
>gi|271502386|ref|YP_003335412.1| porphobilinogen deaminase [Dickeya dadantii Ech586]
gi|270345941|gb|ACZ78706.1| porphobilinogen deaminase [Dickeya dadantii Ech586]
Length = 312
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 161/284 (56%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGDVLLDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L DL +
Sbjct: 64 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNNYATLDDLPEGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL E I
Sbjct: 124 CVGTSSLRRQCQLRAHRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLENRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L+G C+
Sbjct: 184 RTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A + TLY +V A DG R G R DA +G
Sbjct: 244 VPIGSYAELQDDTLYLRALVGAPDGSRIIYAERRGPRQDAEALG 287
>gi|58583630|ref|YP_202646.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
gi|75433978|sp|Q5GVL2|HEM3_XANOR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|58428224|gb|AAW77261.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 304
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 171/292 (58%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IG KGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGDKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L +
Sbjct: 62 KELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL ++ I
Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDERI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A A +G L+ G+V ASDG++ H +G+ D ++GR AQ +
Sbjct: 242 VPVAALARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTQDLGRRVAQGL 292
>gi|51594540|ref|YP_068731.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953]
gi|186893538|ref|YP_001870650.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+]
gi|61213379|sp|Q66G00|HEM3_YERPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059007|sp|B2K065|HEM3_YERPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51587822|emb|CAH19424.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953]
gi|186696564|gb|ACC87193.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+]
Length = 313
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 161/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + A RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LETRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G TL+ +V A DG R G +A +G
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMG 287
>gi|312963804|ref|ZP_07778275.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6]
gi|311281839|gb|EFQ60449.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6]
Length = 313
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLELAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTYTSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPPGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + + L+K ++H DT V ERA L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSEIHALLKPLDHHDTEVRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V DG G + DA +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDNIWLRGLVGDPDGGTLLTAQARGPQADATALGIQVAEEL 294
>gi|170769870|ref|ZP_02904323.1| porphobilinogen deaminase [Escherichia albertii TW07627]
gi|170121308|gb|EDS90239.1| porphobilinogen deaminase [Escherichia albertii TW07627]
Length = 313
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 163/291 (56%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RTALPPEVSLPAVGQGAVGIECRLNDTRTRELLAALNHNETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G+ DA +G A+ +
Sbjct: 244 VPIGSYAELVDGEIWLRALVGAPDGSQIIRGERRGSPQDAEQMGISLAEEL 294
>gi|149908497|ref|ZP_01897159.1| porphobilinogen deaminase [Moritella sp. PE36]
gi|149808331|gb|EDM68268.1| porphobilinogen deaminase [Moritella sp. PE36]
Length = 312
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + +IP+ TKGD I + L ++GG
Sbjct: 1 MATETLRIATRKSPLAMWQAEYVKARLEAIHQ--NLTVELIPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+T + +++
Sbjct: 59 KGLFVKELEVAILENRADIAVHSMKDVPVEFPEGLDLEVICEREDPRDAFVSNTYRQIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ ++D RG + TRLNKL+N AI+LA AG+KRL
Sbjct: 119 LPPGAIVGTCSLRRQCQLSEARPDLKIMDLRGNVNTRLNKLDNKDYDAIILAAAGLKRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E P+ GQGA+ IE +++ + + L+ +NH T D V ERA L
Sbjct: 179 MEYRIASYIEPEQSLPAVGQGAVGIECRIDDERVKALLAPLNHALTSDRVLAERAMNLAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G L+ G+V DG G+R +A +G + A +
Sbjct: 239 EGGCQVPIGSYAIIDGDELWLRGLVGKPDGTEVIRAEIRGDRKNARQLGLELADKLLAQG 298
Query: 301 NKNVF 305
K +
Sbjct: 299 AKEIL 303
>gi|307132975|ref|YP_003884991.1| hydroxymethylbilane synthase [Dickeya dadantii 3937]
gi|306530504|gb|ADN00435.1| hydroxymethylbilane synthase [Dickeya dadantii 3937]
Length = 313
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 164/285 (57%), Gaps = 3/285 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHFVQQRLKACH--PGLRVELVPMVTRGDVLLDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL DL + +
Sbjct: 64 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYDSLDDLPVGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D++V D RG + TRL+KL+N AI+LA AG+KRL E I
Sbjct: 124 CVGTSSLRRQCQLRAHRPDLTVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLEDRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L+G C+
Sbjct: 184 RTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A + G TL+ +V A DG R G R DA +G
Sbjct: 244 VPIGSYAELQDGDTLWLRALVGAPDGSRIIYAERRGLRQDAEQLG 288
>gi|197287145|ref|YP_002153017.1| porphobilinogen deaminase [Proteus mirabilis HI4320]
gi|238058999|sp|B4F1X3|HEM3_PROMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194684632|emb|CAR46538.1| porphobilinogen deaminase [Proteus mirabilis HI4320]
Length = 313
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 156/273 (57%), Gaps = 2/273 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+G C+ I +A + ++ +V + DG+
Sbjct: 239 EGGCQVPIGSYAIWQNGKIWLRALVGSPDGETI 271
>gi|162419364|ref|YP_001605129.1| porphobilinogen deaminase [Yersinia pestis Angola]
gi|238059008|sp|A9R8K0|HEM3_YERPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|162352179|gb|ABX86127.1| porphobilinogen deaminase [Yersinia pestis Angola]
Length = 313
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A + +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSLG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|157368427|ref|YP_001476416.1| porphobilinogen deaminase [Serratia proteamaculans 568]
gi|167008819|sp|A8G848|HEM3_SERP5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157320191|gb|ABV39288.1| porphobilinogen deaminase [Serratia proteamaculans 568]
Length = 313
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMANH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRERRPDLIVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDETTRALLAPLNHAVTETRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I +A G +L+ +V + DG R G A +G + A+ +
Sbjct: 239 EGGCQVPIGSYAELDGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGIELAEEL 294
>gi|195953610|ref|YP_002121900.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1]
gi|195933222|gb|ACG57922.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1]
Length = 285
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 171/289 (59%), Gaps = 9/289 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LAL A +S L + I ++ ++T GD+I + L++IGGKGLF
Sbjct: 3 LRLGTRKSKLALWQANFVKSKLEALG----LEIELVLITTTGDKILDTPLSKIGGKGLFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ EID AVHS KD+P + +GL + +L RED +D F+S + ++L +L ++
Sbjct: 59 KEIENALMEDEIDFAVHSLKDVPAFIPQGLVVDVFLEREDPKDAFVSKSYKTLNELPPNA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RRK LL+ R D+++ D RG ++TRL KL + AI+LA AG+KRL E VI
Sbjct: 119 KIGTSSIRRKVQLLQRRKDLTIEDLRGNVDTRLKKLEDGLYDAIILASAGLKRLGFEGVI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L DF P+ GQG + IE +N + ++K INHE T+ ER+FL ++GSC+
Sbjct: 179 SSYL---DFIPAVGQGIVAIEYKASNKELSNILKQINHEPTYICALAERSFLETVEGSCQ 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+ A + G + DG + E++ G D I +G+D A+
Sbjct: 236 IPMGAHATLAQDLIKIRGFIANEDGTNYRELTLEGK--DPIGLGKDLAK 282
>gi|145220050|ref|YP_001130759.1| porphobilinogen deaminase [Prosthecochloris vibrioformis DSM 265]
gi|189028096|sp|A4SFJ8|HEM3_PROVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145206214|gb|ABP37257.1| porphobilinogen deaminase [Chlorobium phaeovibrioides DSM 265]
Length = 313
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 163/280 (58%), Gaps = 4/280 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEYTKAEL--SRHFPDLDITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS + DL
Sbjct: 60 LFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKNGVKMLDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 KNAKVATSSLRRMSQLKSLRPDFDIKDIRGNLNTRFQKFDEGEFDAMMLAYAGVYRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+VKV+NH +T ER+ L L G
Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSNTEYCCKAERSLLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNG 280
C+ I +A K TL+ V + DG I +E+++ G
Sbjct: 240 GCQIPIGSYASFKNGTLHLLAFVGSVDGTKGIRNEITKTG 279
>gi|225850000|ref|YP_002730234.1| porphobilinogen deaminase [Persephonella marina EX-H1]
gi|225645034|gb|ACO03220.1| porphobilinogen deaminase [Persephonella marina EX-H1]
Length = 308
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 169/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L P + ++ + TKGD+I + L ++GGKGLF
Sbjct: 3 IRIGTRKSKLALWQANYIADQLK--KHFPDLEVELVKIVTKGDKILDVPLAKVGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S S++D+ +
Sbjct: 61 KEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRKA ++ R DI + D RG ++TR+ KL + I+LAYAG+KRL E +
Sbjct: 121 VLGTSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQYDGIILAYAGLKRLGLEGKV 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++IL + P+ QG + IE +++ K +E+V V+NH ++ ERAFL L+G C+
Sbjct: 181 RQILQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+AG++ L G V G S G+ DA ++G A+ + K V
Sbjct: 241 VPLAGYSEIVNGKLKITGFVSDLTGDRVFRDSMEGSLEDAESLGVKLAEKLLSDGAKEVL 300
Query: 306 N 306
Sbjct: 301 E 301
>gi|312884198|ref|ZP_07743909.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368126|gb|EFP95667.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 312
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 164/292 (56%), Gaps = 2/292 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A + +L+ H P + +I + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQANYVKEALIKAH--PGLQVELITMVTKGDIILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P KGL + RED RD F+S+ Q++ L +
Sbjct: 64 VKELENAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNHYQNIDALPNN 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GT SLRR+ + +R D+ V + RG + TRLNKL+ + AI+LA AG+KRL E
Sbjct: 124 AIVGTCSLRRQCQIKEYRPDLIVKELRGNVGTRLNKLDAGEYDAIILAAAGLKRLGLESR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L E P+ GQGA+ IE +++ + +L+ +N DT D V CERA L+G C
Sbjct: 184 IASFLEPEQSLPAVGQGAVGIECRLDDQRLIDLLAPLNDRDTNDRVKCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ I ++ +G ++ +V DG G R DA +G + A +
Sbjct: 244 QVPIGSYSVLEGEQIWLRALVGEPDGSQMVRGEIRGKRDDAEQLGIELANQL 295
>gi|78484457|ref|YP_390382.1| porphobilinogen deaminase [Thiomicrospira crunogena XCL-2]
gi|123728099|sp|Q31JG5|HEM3_THICR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78362743|gb|ABB40708.1| hydroxymethylbilane synthase [Thiomicrospira crunogena XCL-2]
Length = 309
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 171/294 (58%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RI TR SPLA+ A ++ L H+ + ++P+STKGD+I + L +IGGKG
Sbjct: 2 KKTLRIATRKSPLAMWQAEFVKAELEKHHE--GLTVELLPMSTKGDKILDVPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++++GE D AVHS KD+P L +G + A L R + D F+S+ ++L
Sbjct: 60 LFTKELEDRMLAGEADIAVHSMKDVPMVLPEGFALGAILERHEPTDAFVSNDYAHFEELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRRKA L+ R D+ V D RG + TRL KL+ AI+LA +G+KRL+ +
Sbjct: 120 QGAVLGTSSLRRKAQLMAARPDLVVKDLRGNVGTRLGKLDAGDYDAIVLATSGLKRLELD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L+ E P+ QG + IE +P+ EL++V+NH DT ERA L+G
Sbjct: 180 ERIRHELSPETCLPAVSQGTLGIEYFEKDPEVLELIQVLNHRDTEIRTLAERAMNHRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I +A + +Y G+V A DG G++ D +G A+ +
Sbjct: 240 GCQVPIGVYAELEDDQIYLRGLVGALDGSEILRSEARGSQKDPETLGVYVAEQL 293
>gi|227114730|ref|ZP_03828386.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 313
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 162/284 (57%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 IRIATRQSPLALWQARYVQQCLN--HLYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL L S
Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQLPQGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEARI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E+ P+ GQGAI IE +++ + L+ +NH T V ERA L+G C+
Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLDDEHVRHLLAPLNHPATAARVLAERAMNVRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A +G TL+ +V A DG R GN DA +G
Sbjct: 244 VPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGNVSDAEQLG 287
>gi|227325802|ref|ZP_03829826.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 313
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 164/284 (57%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 IRIATRQSPLALWQARYVQQCLN--HLYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ L S
Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLEQLPEGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E+ I
Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEERI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E+ P+ GQGAI IE +++ ++L+ +NH T V ERA L+G C+
Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLDDEHVRQLLAPLNHPATAARVLAERAMNVRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A +G TL+ +V A DG R G DA +G
Sbjct: 244 VPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGRVSDAEQLG 287
>gi|49388603|dbj|BAD25718.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group]
gi|215686353|dbj|BAG87614.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717107|dbj|BAG95470.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 157/260 (60%), Gaps = 3/260 (1%)
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
I ++ L +IGGKGLFT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD
Sbjct: 2 ILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDA 61
Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169
FI TA SL +L SV+G++SLRR++ +L + V++FRG ++TRL KL HA
Sbjct: 62 FICLTASSLAELPAGSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHAT 121
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
LLA AG+KRL + +L++++ P+ QGAI I ++ + +NHEDT +
Sbjct: 122 LLALAGLKRLNMAETATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLA 181
Query: 230 VNCERAFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAI 286
V CER FL+ LDG+C++ IA +A K F G++ + DG +E SR G + +
Sbjct: 182 VACEREFLSVLDGNCRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMV 241
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+G+DA ++ + F+
Sbjct: 242 EMGKDAGHELKAKAGPGFFD 261
>gi|311281516|ref|YP_003943747.1| porphobilinogen deaminase [Enterobacter cloacae SCF1]
gi|308750711|gb|ADO50463.1| porphobilinogen deaminase [Enterobacter cloacae SCF1]
Length = 318
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLRIATRQSPLALWQAHYVKDRLTACH--PGLQVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL ++ RED RD F+S+ SL
Sbjct: 64 KGLFVKELELALLEHRADIAVHSMKDVPVEFPQGLGLTTICEREDPRDAFVSNQYASLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAAQRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LESRIRQALSPEQSLPAVGQGAVGIECRLDDDATRALLAPLNHPETAVRVGAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I +A +G L+ +V A DG R G +A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELQGGELWLRALVGAPDGSRMVRGERRGTPEEAERLGVSLAEEL 299
>gi|11467957|sp|O66621|HEM3_AQUAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 304
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 169/289 (58%), Gaps = 5/289 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L K + ++ ++T GD+IT+ L +IGGKGLF
Sbjct: 3 IRIGTRKSKLALWQANYVKDFL---EKHWGVEVELVKITTTGDKITDVPLAKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L S
Sbjct: 60 KEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSGS 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E I
Sbjct: 120 VIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESEI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C+
Sbjct: 180 TEVL--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGCQ 237
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+ FA + TL + + + + E R GN +A +G A+
Sbjct: 238 VPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAE 286
>gi|153875202|ref|ZP_02003104.1| porphobilinogen deaminase [Beggiatoa sp. PS]
gi|152068334|gb|EDN66896.1| porphobilinogen deaminase [Beggiatoa sp. PS]
Length = 309
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 161/277 (58%), Gaps = 4/277 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL R L H P I ++ ++T+GD+I + L +IGGKG
Sbjct: 4 KNIIRIATRKSPLALWQTHHVRDILCHAH--PQLQIELVEMTTQGDKILDVPLAKIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L G++D AVHS KD+P + GL + + RE+ D F+S+ L
Sbjct: 62 LFVKELENGLFEGKVDIAVHSMKDVPVEFPPGLILPVIMEREEPYDAFVSNHYSGFTALP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR+ LL R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 122 QGAIVGTSSLRRQCQLLVLRPDLQIRTLRGNVGTRLKKLDNGDYDAIILAAAGLKRLGMA 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+E+L E P+ GQGAI IE ++ + Q+L+ V+NH+ T + + ERA +L+G
Sbjct: 182 ERIREVLKPEVMLPAIGQGAIGIECRADDTETQQLIAVLNHKPTQERLKAERALNEQLNG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVS 277
C+ IAG+A + + G+V DGK + H+V
Sbjct: 242 GCQVPIAGYAEIEAEMMTVRGLVGDIDGKEVLHHKVQ 278
>gi|108806170|ref|YP_650086.1| porphobilinogen deaminase [Yersinia pestis Antiqua]
gi|108810280|ref|YP_646047.1| porphobilinogen deaminase [Yersinia pestis Nepal516]
gi|145600717|ref|YP_001164793.1| porphobilinogen deaminase [Yersinia pestis Pestoides F]
gi|153949991|ref|YP_001399195.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758]
gi|153997095|ref|ZP_02022228.1| porphobilinogen deaminase [Yersinia pestis CA88-4125]
gi|161484901|ref|NP_667719.2| porphobilinogen deaminase [Yersinia pestis KIM 10]
gi|161511325|ref|NP_994488.2| porphobilinogen deaminase [Yersinia pestis biovar Microtus str.
91001]
gi|165926233|ref|ZP_02222065.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939151|ref|ZP_02227702.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011678|ref|ZP_02232576.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213633|ref|ZP_02239668.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401822|ref|ZP_02307310.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421084|ref|ZP_02312837.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426299|ref|ZP_02318052.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470637|ref|ZP_02335341.1| porphobilinogen deaminase [Yersinia pestis FV-1]
gi|218930852|ref|YP_002348727.1| porphobilinogen deaminase [Yersinia pestis CO92]
gi|229837182|ref|ZP_04457347.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A]
gi|229839542|ref|ZP_04459701.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229900105|ref|ZP_04515242.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900449|ref|ZP_04515578.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|270488804|ref|ZP_06205878.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27]
gi|294505512|ref|YP_003569574.1| porphobilinogen deaminase [Yersinia pestis Z176003]
gi|17380441|sp|P46355|HEM3_YERPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|122979815|sp|Q1CBN1|HEM3_YERPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123373560|sp|Q1CNI3|HEM3_YERPN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158514109|sp|A4TRA8|HEM3_YERPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167008820|sp|A7FD67|HEM3_YERP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108773928|gb|ABG16447.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|108778083|gb|ABG12141.1| hydroxymethylbilane synthase [Yersinia pestis Antiqua]
gi|115349463|emb|CAL22436.1| porphobilinogen deaminase [Yersinia pestis CO92]
gi|145212413|gb|ABP41820.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides F]
gi|149289401|gb|EDM39479.1| porphobilinogen deaminase [Yersinia pestis CA88-4125]
gi|152961486|gb|ABS48947.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758]
gi|165912924|gb|EDR31550.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921757|gb|EDR38954.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989447|gb|EDR41748.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205306|gb|EDR49786.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961213|gb|EDR57234.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048715|gb|EDR60123.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054818|gb|EDR64622.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682468|gb|EEO78555.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|229686885|gb|EEO78964.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695908|gb|EEO85955.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706125|gb|EEO92134.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A]
gi|262363578|gb|ACY60299.1| porphobilinogen deaminase [Yersinia pestis D106004]
gi|262367506|gb|ACY64063.1| porphobilinogen deaminase [Yersinia pestis D182038]
gi|270337308|gb|EFA48085.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27]
gi|294355971|gb|ADE66312.1| porphobilinogen deaminase [Yersinia pestis Z176003]
gi|320013550|gb|ADV97121.1| hydroxymethylbilane synthase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 313
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G TL+ +V A DG R G +A +G
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMG 287
>gi|304309752|ref|YP_003809350.1| Porphobilinogen deaminase [gamma proteobacterium HdN1]
gi|301795485|emb|CBL43683.1| Porphobilinogen deaminase [gamma proteobacterium HdN1]
Length = 311
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 156/270 (57%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR S LAL A R+ L+ H P ++ II ++TKGD+I + L +IGG
Sbjct: 1 MSNHRIRIATRESALALWQAEHVRACLLAAH--PGLDVEIIGMTTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL +S L RED RD F+S+ +L
Sbjct: 59 KGLFVKELEVAMLEGIADIAVHSMKDVPVDFPEGLGLSVILEREDPRDAFVSNQYDTLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GT SLRR+ L R DI +++ RG + +RL KL+ + AILLA AG+KRL
Sbjct: 119 LPLGARVGTCSLRRQTQLRARRPDIEILELRGNVNSRLAKLDAGQFDAILLAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ P+ GQGAI IE ++ + L+ +NH DT V+ ERA L
Sbjct: 179 FHERIRATLDPAASLPAVGQGAIGIECRTDDARTLALLAPLNHPDTHTCVSAERAMNHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ IAG+A G LY G+V DG
Sbjct: 239 QGGCQVPIAGYAELHGDQLYMRGLVGEPDG 268
>gi|170026227|ref|YP_001722732.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII]
gi|238059009|sp|B1JPE6|HEM3_YERPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169752761|gb|ACA70279.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII]
Length = 313
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYTHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDGHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G TL+ +V A DG R G +A +G
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMG 287
>gi|262280694|ref|ZP_06058477.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202]
gi|262257594|gb|EEY76329.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202]
Length = 314
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 170/293 (58%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEYIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ VID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQVIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ +E + + L++ + HE+T V ERAF A L+G
Sbjct: 189 RIRHCLTPDISLPAVGQGALGLECRAADNEVLSLIQPLLHEETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V ++DG+ +A +G + A+ +
Sbjct: 249 CQVPIAGYATLQNGQIHIEGRVGSADGQTLLRAELTDEASNAHQLGENLARNL 301
>gi|188532369|ref|YP_001906166.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99]
gi|238058922|sp|B2VG55|HEM3_ERWT9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188027411|emb|CAO95258.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99]
Length = 313
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+ H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRRSPLALWQAEYVQRRLIACH--PGLRVELLPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P GL + A RED D F+SH S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ + L+ +NH +T V+ ERA L
Sbjct: 179 LGDRIRQVMPAEESLPAVGQGAVGIECRLDDIQTIALLAALNHSETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A + L+ G+V + DG R G R DA +G
Sbjct: 239 EGGCQVPIGSYALLEDDQLWLRGLVGSPDGNEMVRGERRGPRADAEKMG 287
>gi|78189475|ref|YP_379813.1| porphobilinogen deaminase [Chlorobium chlorochromatii CaD3]
gi|123757008|sp|Q3AQF5|HEM3_CHLCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78171674|gb|ABB28770.1| Porphobilinogen deaminase [Chlorobium chlorochromatii CaD3]
Length = 313
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 165/280 (58%), Gaps = 4/280 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L + P I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAELSKHY--PDMEITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK L++ EID AVHS KD+PT +GL I+++ RED RDV IS LKDL
Sbjct: 60 LFTKDIEKHLLAREIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGVKLKDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ + D RG + TR K ++ + A++LAYAG+ RL
Sbjct: 120 PNARMATSSLRRMSQLLSVRPDLDIRDIRGNLNTRFQKFDDGEFDAMMLAYAGVYRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + P+ GQGA+ IET V++ + +E+V+++NH T ERA L L G
Sbjct: 180 DRISEILPHDMMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNG 280
C+ I +A TL V + DGK + +E+++ G
Sbjct: 240 GCQIPIGAYATFSNGTLKLLAFVGSVDGKTALRNEITKTG 279
>gi|21957067|gb|AAM83970.1|AE013638_8 porphobilinogen deaminase; hydroxymethylbilane synthase [Yersinia
pestis KIM 10]
gi|45437816|gb|AAS63365.1| porphobilinogen deaminase [Yersinia pestis biovar Microtus str.
91001]
Length = 369
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 162/293 (55%), Gaps = 2/293 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 57 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 114
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 115 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 174
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 175 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 234
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 235 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 294
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+G C+ I +A +G TL+ +V A DG R G +A +G + A
Sbjct: 295 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELA 347
>gi|15605804|ref|NP_213181.1| porphobilinogen deaminase [Aquifex aeolicus VF5]
gi|2982966|gb|AAC06580.1| porphobilinogen deaminase [Aquifex aeolicus VF5]
Length = 323
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 169/289 (58%), Gaps = 5/289 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L + + ++ ++T GD+IT+ L +IGGKGLF
Sbjct: 22 IRIGTRKSKLALWQANYVKDFLEKHWGV---EVELVKITTTGDKITDVPLAKIGGKGLFV 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L S
Sbjct: 79 KEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSGS 138
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E I
Sbjct: 139 VIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESEI 198
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C+
Sbjct: 199 TEVL--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGCQ 256
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+ FA + TL + + + + E R GN +A +G A+
Sbjct: 257 VPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAE 305
>gi|323495298|ref|ZP_08100379.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546]
gi|323310475|gb|EGA63658.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546]
Length = 312
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QTTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNSIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ + R D+ + + RG + TRL KL+ AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQIKEARPDLIIKELRGNVGTRLGKLDAGDYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA L+
Sbjct: 181 EERIKSFIEPEQSLPAVGQGAVGIECRLDDDRLIKLLEPLNHKETADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG G+R DA +G + A +
Sbjct: 241 GGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIVRGEIRGSRTDAEALGVELANQLLADGA 300
Query: 302 KNVFN 306
K +
Sbjct: 301 KEILT 305
>gi|254427203|ref|ZP_05040910.1| porphobilinogen deaminase [Alcanivorax sp. DG881]
gi|196193372|gb|EDX88331.1| porphobilinogen deaminase [Alcanivorax sp. DG881]
Length = 310
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG
Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLAVELVRIKTQGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +L +G + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPEGFALPVICEREDPRDAFVSNTFDSLSS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A + R D+ V RG ++TRL KL+ + AI+LA AG+KRL+
Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVKSLRGNVQTRLGKLDAGEFDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE + + +L+ ++ DTWD V ERA L
Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREADTRTIDLLSPLSDVDTWDRVVAERAMNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
DG C+ IAGFA + L+ G+V DG + R +G D A+ +
Sbjct: 239 DGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGSAPRAKGAELGIDIAEQL 294
>gi|270264251|ref|ZP_06192518.1| porphobilinogen deaminase [Serratia odorifera 4Rx13]
gi|270041900|gb|EFA14997.1| porphobilinogen deaminase [Serratia odorifera 4Rx13]
Length = 313
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ S
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIDFPAGLGLVTICERDDPRDAFVSNRFASFDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR++ L R D+ V D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQSQLRERRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDDATRALLAPLNHAATDIRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I +A +G +L+ +V + DG R G A +G + A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGVELAEEL 294
>gi|56421180|ref|YP_148498.1| porphobilinogen deaminase [Geobacillus kaustophilus HTA426]
gi|61213219|sp|Q5KWK6|HEM3_GEOKA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56381022|dbj|BAD76930.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Geobacillus kaustophilus HTA426]
Length = 309
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 175/288 (60%), Gaps = 7/288 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LAL +T+ + ++ ++ P + + TKGDR+ + TL+++GGKGLF +
Sbjct: 6 VGSRRSKLALT---QTKWVINELKQLGAPFTFEVKEIVTKGDRVLDVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL SV
Sbjct: 63 EIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVSRREDARDVLVSKGNRMLSDLPPGSV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185
IGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ + VI
Sbjct: 123 IGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGDDVI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++G C+
Sbjct: 183 SDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
IAG+A K T+ +V + DGK ++ G D +GR AA
Sbjct: 243 VPIAGYAEVKEGTVRLTALVASPDGKEMYKEIVTG--ADPEAVGRQAA 288
>gi|258591837|emb|CBE68140.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [NC10 bacterium
'Dutch sediment']
Length = 315
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 152/271 (56%), Gaps = 2/271 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++GTR SPLAL A L + P ++ I+P+ T GD+ + L+++GG
Sbjct: 1 MRSHTVKLGTRGSPLALCQAGLVTEELR--RRWPDLDVTIVPIKTSGDKFLDVVLSQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ G ID AVHS KD+P +L GL A + RED D ++ D
Sbjct: 59 KGLFVKEIEEALLDGRIDLAVHSLKDLPAELAPGLCEGAVMRREDPLDALVARNGLRFTD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR+ L R D+ + RG ++TRLNKL A++LA AG+ RL
Sbjct: 119 LPRGARIGTSSLRRQVQFLHCRPDLQIESLRGNVQTRLNKLETLGLEAVVLAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L + P+ GQGA+ IE ++ + E V+ +NH +T + ERAFL L
Sbjct: 179 LQDRITERLQPDLCLPAIGQGALVIEIREDDRQTAERVETLNHRETRQATTAERAFLRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
GSC + IA F +G TL G+V DGK
Sbjct: 239 GGSCVTPIAAFGRLEGETLELTGMVAGLDGK 269
>gi|52081298|ref|YP_080089.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580]
gi|52786677|ref|YP_092506.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580]
gi|319647211|ref|ZP_08001433.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2]
gi|81609014|sp|Q65GK1|HEM3_BACLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52004509|gb|AAU24451.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
licheniformis ATCC 14580]
gi|52349179|gb|AAU41813.1| HemC [Bacillus licheniformis ATCC 14580]
gi|317390558|gb|EFV71363.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2]
Length = 313
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 169/291 (58%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGLF +E
Sbjct: 6 VGSRRSKLAMTQTKWVIKKLEELN--PDFTFEIKEIVTKGDRILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ ++SGEID AVHS KDMP+ L +GL + RED RDV IS Q L DL +V+
Sbjct: 64 IEQAMLSGEIDMAVHSMKDMPSVLPEGLMVGCIPKREDARDVLISKGRQKLADLKQGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL+ R D+ + RG I+TRL KL AI+LA AG+ R+ K+ V+
Sbjct: 124 GTSSLRRSAQLLQMRPDLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKDDVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ E P+ GQGA+ IE ++ + L +N T +V ERAFL ++G C+
Sbjct: 184 EFLDPESCLPAVGQGALAIECRGSDEELLSLFSRLNDRYTQLTVTAERAFLHAMEGGCQV 243
Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAGFA + + G+V + DGK + + G +A +GR+ A +
Sbjct: 244 PIAGFAKMDEDGVIELTGLVASPDGKTVYRETVKGKDPEA--VGRECAAVM 292
>gi|110598700|ref|ZP_01386964.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031]
gi|110339694|gb|EAT58205.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031]
Length = 313
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 165/280 (58%), Gaps = 4/280 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKTEL--SRHFPELDIKLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS LK+L
Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTGTPEGLIITSFTEREDTRDVIISKGGVKLKELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 ANAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDAGEFDAMMLAYAGVYRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G
Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FH-EVSRNG 280
C+ I + + TL V + DGK+ H E+++ G
Sbjct: 240 GCQIPIGAYGSFQNGTLKLLAYVGSVDGKVGLHDEITKTG 279
>gi|225848376|ref|YP_002728539.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644642|gb|ACN99692.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 308
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 166/267 (62%), Gaps = 3/267 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RIGTR S LAL A + + +H + + ++ ++T GD+I + L +IGGKGLF +
Sbjct: 4 RIGTRKSQLALWQANYIANLINQIHGV---EVELVKITTSGDKILDVPLAKIGGKGLFVK 60
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE ++ GEID AVHS KD+PT+L +GL I A RED RD F+S +SLKDL +V
Sbjct: 61 EIEDAMLKGEIDIAVHSLKDVPTQLPEGLDIIAITEREDPRDAFLSTKYKSLKDLPAGAV 120
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL +
Sbjct: 121 VGTSSLRRKSQIMKMRDDLIINDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSKAS 180
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
I + ++ P+ QG + IE V++ + +++++ IN+++++ ER+FL L+G C+
Sbjct: 181 YIFSPQEMIPAVCQGFLGIEARVDDERIKKILEPINNQESFIRATAERSFLKTLEGGCQV 240
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ + K ++ G + +GK F
Sbjct: 241 PLGAYCEIKDDFIHITGFIADLEGKTF 267
>gi|295687518|ref|YP_003591211.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756]
gi|295429421|gb|ADG08593.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756]
Length = 333
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 161/280 (57%), Gaps = 17/280 (6%)
Query: 3 KKPFRIGTRCSPLALAHA--FETR----------SSLMDVHKIPPHNIVIIPLSTKGDRI 50
+ P RIG R S L+LA + + R +S ++ P +IP+ T GDRI
Sbjct: 15 QPPIRIGARGSKLSLAQSGLMQARIAAALGAPAGASKEEIEAFAP----LIPIVTSGDRI 70
Query: 51 TNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
+R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD F
Sbjct: 71 QDRRLMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAF 130
Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
ISH + L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AIL
Sbjct: 131 ISHVCERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAIL 190
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA +G+ RL + K ++ + PP+PGQGA+ IET + A L + T +V
Sbjct: 191 LAQSGLNRLGLGHLTKSWIDPDACPPAPGQGALVIETRAEDIGAAWL-DAVRCRPTTIAV 249
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
ER L L+GSC++AI A G+ L L +G
Sbjct: 250 AAERGALLALEGSCRTAIGARATLDGARLSMIVEALTPNG 289
>gi|323141796|ref|ZP_08076663.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067]
gi|322413719|gb|EFY04571.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067]
Length = 306
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 173/303 (57%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LAL + + L + P +V+ + TKGDRI + L +IGGKG
Sbjct: 2 KAKLTIGTRQSLLALWQSNHIAALLR--KEYPECEVVLKKIVTKGDRILDVPLAQIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE+ L+ G +D AVHS KDMPT L +GL ++A R ++ D F+S+ + ++L
Sbjct: 60 LFTKEIEEDLLDGTVDLAVHSLKDMPTVLPEGLCLTAITERANVGDAFVSNKYATFEELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L SV+GTSSLRRKA LL R D+ + D RG ++TRL KL+ AI+LA AG++RL
Sbjct: 120 LGSVVGTSSLRRKAQLLAKRPDLEIRDLRGNVDTRLRKLDEGLYDAIILAAAGLERLGHG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++ + P+ GQGA+ IE + + ++++ +N +T + + ERAFL L+G
Sbjct: 180 DRISSLIPADVCLPAVGQGALAIEARTADKEVRDMLSFLNDLNTKQATDAERAFLGLLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A +G + I+ A DG + NG DA+++G+ + + +
Sbjct: 240 GCQVPIGVHADVEGENIRIEAIIAALDGSTILRDTINGKADDAVSLGQQLGKKMLAAGGQ 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|315178740|gb|ADT85654.1| porphobilinogen deaminase [Vibrio furnissii NCTC 11218]
Length = 312
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 167/302 (55%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGKGLF
Sbjct: 6 PIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDELPHG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRLK E+
Sbjct: 124 AIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEQR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+G C
Sbjct: 184 IRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A G L+ +V DG G R DA +G + A + +++
Sbjct: 244 QVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGARDI 303
Query: 305 FN 306
Sbjct: 304 LT 305
>gi|157833452|pdb|1PDA|A Chain A, Structure Of Porphobilinogen Deaminase Reveals A Flexible
Multidomain Polymerase With A Single Catalytic Site
gi|41664|emb|CAA27813.1| unnamed protein product [Escherichia coli]
Length = 313
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 163/291 (56%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G+C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGACQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ G+V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRGLVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|327439433|dbj|BAK15798.1| porphobilinogen deaminase [Solibacillus silvestris StLB046]
Length = 310
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 163/281 (58%), Gaps = 3/281 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + L + P + + + TKGDRI + L+++GGKGLF +E
Sbjct: 6 VGSRKSKLALTQTNWFINELKEAG--VPFDFEVKEIVTKGDRILDVQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L EID AVHS KDMP L +GL I PRED RD FIS+ DL +++
Sbjct: 64 IEQALYDKEIDFAVHSMKDMPAVLPEGLIIGCIPPREDARDAFISNGHVKFADLPKGAIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL+ R D+ + RG ++TRL KL AI+LA AG+KRL ++V+
Sbjct: 124 GTSSLRRSAQLLQARPDLEIKWIRGNVDTRLKKLETEDFDAIILAAAGLKRLGWSDEVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ + P+ QG++ IE ++ + E + + TW + + ER+FLA +DG C+
Sbjct: 184 EYLDTDICLPAVAQGSLGIECRADDTELLEQLTKLTDATTWATAHAERSFLAAMDGGCQV 243
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
IAG+A +G T+ G+V A D + ++ + G DA+
Sbjct: 244 PIAGYATVEGDTITLTGLVAAPDASVTYKETLTGTDADAVG 284
>gi|191174267|ref|ZP_03035776.1| porphobilinogen deaminase [Escherichia coli F11]
gi|190905450|gb|EDV65080.1| porphobilinogen deaminase [Escherichia coli F11]
Length = 318
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299
>gi|260596029|ref|YP_003208600.1| porphobilinogen deaminase [Cronobacter turicensis z3032]
gi|260215206|emb|CBA27057.1| Porphobilinogen deaminase [Cronobacter turicensis z3032]
Length = 313
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 164/291 (56%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL ++ S
Sbjct: 64 KELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYKSLDEMPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+ + I
Sbjct: 124 IVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L+G C+
Sbjct: 184 TSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A K L+ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELKDGELWLRALVGAPDGSRIVRGERRGAPQDASQLGVSLAEEL 294
>gi|206580079|ref|YP_002241132.1| porphobilinogen deaminase [Klebsiella pneumoniae 342]
gi|290513167|ref|ZP_06552529.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55]
gi|226706289|sp|B5XYL1|HEM3_KLEP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|206569137|gb|ACI10913.1| porphobilinogen deaminase [Klebsiella pneumoniae 342]
gi|289774378|gb|EFD82384.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55]
Length = 313
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L
Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A L+ +V A DG R G A +G
Sbjct: 239 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALG 287
>gi|192360982|ref|YP_001983840.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107]
gi|190687147|gb|ACE84825.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107]
Length = 315
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 165/273 (60%), Gaps = 4/273 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A ++ L H P + ++PL+++GD+I + L ++GGKGLF
Sbjct: 8 LRIATRKSLLALWQADYVKTELERHH--PGLRVELVPLTSRGDKILDVPLAKVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L++G D AVHS KD+P + GL ++ PRED RD F+S+ SL DL +
Sbjct: 66 KELEQALLAGAADIAVHSMKDVPMEFPDGLGLAVICPREDARDAFVSNRFASLDDLPAGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ LL R D+ V RG ++TRL KL++ + AI+LA AG+ RL+ + I
Sbjct: 126 VVGTSSLRRQCQLLARRPDLQVKFLRGNVQTRLQKLDDGEYDAIILAAAGLIRLELQARI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ E P+ GQGA+ IE + + L++ ++H+ T + V ERA L G C+
Sbjct: 186 RSLIAPEVSLPAGGQGAVGIECRMQDQATLALLQPLHHQPTAEQVLAERAMNRRLQGGCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK--IFHEV 276
IA +A +G L+ G+V A DG +F E+
Sbjct: 246 VPIACYALQQGGELWLRGLVGAPDGSQMLFDEI 278
>gi|212710180|ref|ZP_03318308.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM
30120]
gi|212687179|gb|EEB46707.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM
30120]
Length = 314
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 167/291 (57%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A+ ++ L +H + ++P+ TKGD I + L ++GGKGLF
Sbjct: 7 VRIATRKSPLALWQAYFVKAKLEQLHS--GLQVELVPMVTKGDIILDTPLAKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ L S
Sbjct: 65 KELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDALPAGS 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+ ++ I
Sbjct: 125 IVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLELDERI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K L E P+ GQGA+ IE +N+ + ++L+ +NH+ T V ERA L+G C+
Sbjct: 185 KTALEPEQSLPAVGQGAVGIECRLNDQRTRDLLAKLNHDATSICVLAERAMNMRLEGGCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A +G ++ +V A DG R DAI G A+ +
Sbjct: 245 VPIGSYAIWQGDKIWLRALVGAPDGSQVIRGERLIAPVDAIQAGISLAEEL 295
>gi|299771850|ref|YP_003733876.1| porphobilinogen deaminase [Acinetobacter sp. DR1]
gi|298701938|gb|ADI92503.1| porphobilinogen deaminase [Acinetobacter sp. DR1]
Length = 309
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 168/293 (57%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G
Sbjct: 184 RIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHEETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 244 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEASNAHQLGENLARNL 296
>gi|288937772|ref|YP_003441831.1| porphobilinogen deaminase [Klebsiella variicola At-22]
gi|288892481|gb|ADC60799.1| porphobilinogen deaminase [Klebsiella variicola At-22]
Length = 318
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A L+ +V A DG R G A +G
Sbjct: 244 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALG 292
>gi|327395980|dbj|BAK13402.1| porphobilinogen deaminase HemC [Pantoea ananatis AJ13355]
Length = 317
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + L+ H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLNKIFRIATRQSPLALWQAQYVQQRLISAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KD+P +GL + R+D RD F+S+ S+ +
Sbjct: 63 KGLFVKELEQAMLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDE 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL
Sbjct: 123 LPQGAVIGTSSLRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++ L + P+ GQGA+ IE +++ L++ +NH+DT V ERA L
Sbjct: 183 LADRIRQPLPADISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I FA +G L+ G+V A DG + R G R A +G
Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMG 291
>gi|240141705|ref|YP_002966185.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens AM1]
gi|240011682|gb|ACS42908.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens AM1]
Length = 294
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 3/292 (1%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L +
Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHSVIGTSSLR 133
EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL + +GTSSLR
Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+
Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMADVARSVLSVEE 178
Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A
Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238
Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
KG + G++ DG V R G DA IGR+A ++ + F
Sbjct: 239 VKGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGREAGAELKRAAGDVYF 290
>gi|238784737|ref|ZP_04628740.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970]
gi|238714333|gb|EEQ06342.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970]
Length = 313
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 161/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S + L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSSYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + +E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPVEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G L+ +V A DG R G +A +G
Sbjct: 239 EGGCQVPIGSYAELEGDVLWLRALVGAPDGSEIIRGERRGPANNAEQMG 287
>gi|289207199|ref|YP_003459265.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix]
gi|288942830|gb|ADC70529.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix]
Length = 315
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 159/286 (55%), Gaps = 2/286 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP RI TR SPLA+ A + L +H P + ++ ++T+GDR+ + L IGGKGL
Sbjct: 2 KPLRIATRKSPLAMWQAEHVAARLRGLH--PDLPVELVGMTTQGDRVLDSPLARIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ D AVHS KD+P +L L + L RED D F+S+T + +L
Sbjct: 60 FVKELEVAMLEDRADIAVHSVKDVPMELPADLVLPVILDREDPLDAFVSNTYAHVDELPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +G+SSLRR+ L R D+ + D RG + TRL KL+ + AILLA AG+KRL ++
Sbjct: 120 GARVGSSSLRRQCQLRARRPDLKITDLRGNVNTRLGKLDAGEYDAILLAAAGLKRLGFDE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L P+ GQGAI IE N+P+ L+ +N DT D V ERAF L+G
Sbjct: 180 RIRARLEPAVSLPAVGQGAIAIECRENDPEIAALIAPLNDRDTSDRVRAERAFNRRLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C+ +AG A G L G+V A DG G R DA +G
Sbjct: 240 CQVPLAGHATLDGDRLRLDGLVGAVDGSQLLRRQVEGPRGDAEALG 285
>gi|293390862|ref|ZP_06635196.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951396|gb|EFE01515.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 308
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 160/270 (59%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG
Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDRLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQLKKLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L
Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I G+A + S LY +V + DG
Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDG 268
>gi|313110333|ref|ZP_07796223.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016]
gi|310882725|gb|EFQ41319.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016]
Length = 313
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ +N++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSINVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ IA +A +G L+ G+V DG
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268
>gi|157377265|ref|YP_001475865.1| porphobilinogen deaminase [Shewanella sediminis HAW-EB3]
gi|189028158|sp|A8G0W4|HEM3_SHESH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157319639|gb|ABV38737.1| Hydroxymethylbilane synthase [Shewanella sediminis HAW-EB3]
Length = 309
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRASRPDLVIRDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRINDERVKALLAPLEHTETRHRVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TL G+V DG E ++ G++ DA IG A+ +
Sbjct: 239 EGGCQVPIGAYAEIQDDTLTLRGLVGNPDGSHIIEATKVGSKTDAQAIGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKAILD 304
>gi|138896211|ref|YP_001126664.1| porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2]
gi|196250167|ref|ZP_03148861.1| porphobilinogen deaminase [Geobacillus sp. G11MC16]
gi|158513835|sp|A4IRG5|HEM3_GEOTN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134267724|gb|ABO67919.1| Porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2]
gi|196210351|gb|EDY05116.1| porphobilinogen deaminase [Geobacillus sp. G11MC16]
Length = 309
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 175/291 (60%), Gaps = 7/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LAL +T + ++ ++ P + + TKGDR+ + TL+++GGKGLF +
Sbjct: 6 VGSRRSKLALT---QTNWVINELKRLGAPFTFEVKEIVTKGDRVLDVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE ++++G ID AVHS KDMP L GL I + RED+RDV +S SL DL +V
Sbjct: 63 EIEHEMLTGGIDMAVHSMKDMPAVLPSGLVIGSVPRREDVRDVLVSKGNLSLSDLPSGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185
IGTSSLRR A LL +R D+++ RG I+TRL KL N AI+LA AG+ R+ + VI
Sbjct: 123 IGTSSLRRSAQLLAYRPDVTIKWIRGNIDTRLAKLKNEDYDAIVLAAAGLARMGWSDDVI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ + P+ GQGA+ +E ++ + +E + +N E T +V ERAFL +++G C+
Sbjct: 183 SEYLSPDVCVPAVGQGALAVECREDDVELREWLSRLNDEQTERAVRAERAFLQQMEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+A K ++ +V + DGK ++ G D +GR AA +
Sbjct: 243 VPIAGYAEVKEGMVHLTALVASPDGKEKYKEIVIG--ADPEEVGRQAAALL 291
>gi|315497777|ref|YP_004086581.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48]
gi|315415789|gb|ADU12430.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48]
Length = 314
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 166/274 (60%), Gaps = 13/274 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDV--------HKIPPHNIVIIPLSTKGDRITNRTLTE 57
+IGTR S LA + ++ H++ P +VII +T+GDRI +R L E
Sbjct: 5 LKIGTRGSRLATTQCGWVQRQIVTALGHDPALSHEVAP--LVII--TTQGDRIQDRRLIE 60
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
GGK LFT+EIE L+SGE+D AVHS KDMP + + GL + A+ RED RD F+S +S
Sbjct: 61 AGGKQLFTKEIEDALLSGEVDVAVHSLKDMPAEDIPGLSLCAFPVREDPRDAFVSLKYRS 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+DL + +GT+SLRR+A L R D+ V+ RG ++TRL+KL A+LLA AG+K
Sbjct: 121 LEDLPQGAKLGTASLRRQAQALAVRPDLEVVMLRGNVDTRLSKLEAGHCDAMLLAAAGLK 180
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E IK ++ + FP +PGQGA+ I+ N+ QE +K ++H +T ++ ER L
Sbjct: 181 RMGLEAHIKSYIDPDLFPCAPGQGALAIQCRTNDLD-QEWIKRLHHVETHLQISAERGAL 239
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
L+ SC++A+ +A +G L + L +DG+
Sbjct: 240 VALEASCRTAVGAYAKIEGDALTLFVEALTADGR 273
>gi|306815158|ref|ZP_07449311.1| porphobilinogen deaminase [Escherichia coli NC101]
gi|34222567|sp|Q8FBP1|HEM3_ECOL6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222035503|emb|CAP78248.1| Porphobilinogen deaminase [Escherichia coli LF82]
gi|305851527|gb|EFM51981.1| porphobilinogen deaminase [Escherichia coli NC101]
gi|312948358|gb|ADR29185.1| porphobilinogen deaminase [Escherichia coli O83:H1 str. NRG 857C]
Length = 313
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|90414241|ref|ZP_01222221.1| porphobilinogen deaminase [Photobacterium profundum 3TCK]
gi|90324688|gb|EAS41229.1| porphobilinogen deaminase [Photobacterium profundum 3TCK]
Length = 341
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PGLVVELVPMVTKGDIILDTPLAKVGG 89
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ +
Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ + + L+ +NH +T + CERA L
Sbjct: 210 MHDRIRSAIEPEESLPAVGQGAVGIECRLDDHRVRALLATLNHPETATRIFCERAMNNHL 269
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I ++ +G ++ +V DG G D +G A+ +
Sbjct: 270 QGGCQVPIGSYSELQGDQIWLRALVGEPDGSKMVRGEITGAAIDGEALGTQLAEQLLADG 329
Query: 301 NKNVFN 306
K + +
Sbjct: 330 AKEILD 335
>gi|254564213|ref|YP_003071308.1| Porphobilinogen deaminase [Methylobacterium extorquens DM4]
gi|254271491|emb|CAX27506.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens DM4]
Length = 294
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 3/292 (1%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L +
Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHSVIGTSSLR 133
EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL + +GTSSLR
Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+
Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMANVARSVLSVEE 178
Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A
Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238
Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G + G++ DG V R G DA IGRDA ++ + F
Sbjct: 239 VSGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGRDAGAELKRAAGDVYF 290
>gi|26250543|ref|NP_756583.1| porphobilinogen deaminase [Escherichia coli CFT073]
gi|110644128|ref|YP_671858.1| porphobilinogen deaminase [Escherichia coli 536]
gi|227888613|ref|ZP_04006418.1| hydroxymethylbilane synthase [Escherichia coli 83972]
gi|300979364|ref|ZP_07174522.1| porphobilinogen deaminase [Escherichia coli MS 200-1]
gi|300985714|ref|ZP_07177569.1| porphobilinogen deaminase [Escherichia coli MS 45-1]
gi|301047316|ref|ZP_07194402.1| porphobilinogen deaminase [Escherichia coli MS 185-1]
gi|26110973|gb|AAN83157.1|AE016769_272 Porphobilinogen deaminase [Escherichia coli CFT073]
gi|110345720|gb|ABG71957.1| porphobilinogen deaminase [Escherichia coli 536]
gi|227834452|gb|EEJ44918.1| hydroxymethylbilane synthase [Escherichia coli 83972]
gi|300300835|gb|EFJ57220.1| porphobilinogen deaminase [Escherichia coli MS 185-1]
gi|300308036|gb|EFJ62556.1| porphobilinogen deaminase [Escherichia coli MS 200-1]
gi|300407988|gb|EFJ91526.1| porphobilinogen deaminase [Escherichia coli MS 45-1]
gi|307555929|gb|ADN48704.1| porphobilinogen deaminase [Escherichia coli ABU 83972]
gi|315293155|gb|EFU52507.1| porphobilinogen deaminase [Escherichia coli MS 153-1]
gi|324007476|gb|EGB76695.1| porphobilinogen deaminase [Escherichia coli MS 57-2]
gi|324014708|gb|EGB83927.1| porphobilinogen deaminase [Escherichia coli MS 60-1]
Length = 320
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|330908104|gb|EGH36623.1| porphobilinogen deaminase [Escherichia coli AA86]
Length = 318
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEEL 299
>gi|312969469|ref|ZP_07783671.1| porphobilinogen deaminase [Escherichia coli 2362-75]
gi|312286016|gb|EFR13934.1| porphobilinogen deaminase [Escherichia coli 2362-75]
Length = 313
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|222054398|ref|YP_002536760.1| porphobilinogen deaminase [Geobacter sp. FRC-32]
gi|254800252|sp|B9M416|HEM3_GEOSF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|221563687|gb|ACM19659.1| porphobilinogen deaminase [Geobacter sp. FRC-32]
Length = 318
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 166/296 (56%), Gaps = 3/296 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MALKQLRIGTRASQLALWQANWVKSELE--QRYPGMEVSLVKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS + D
Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGTK-FAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL K A++LA AG+KRL
Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDMEMVIIRGNVETRINKLETEKLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E L + P+ GQGA+ IE ++N + ++ + NH T +V ERA L
Sbjct: 178 FTEKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKQTIDFFNHPATAYAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA F GS L G + + DGK + G D +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVTGSDLKLVGFIASVDGKTSVRGTITGPAADCEKLGIKLAEQL 293
>gi|91213326|ref|YP_543312.1| porphobilinogen deaminase [Escherichia coli UTI89]
gi|117626062|ref|YP_859385.1| porphobilinogen deaminase [Escherichia coli APEC O1]
gi|237702812|ref|ZP_04533293.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA]
gi|91074900|gb|ABE09781.1| porphobilinogen deaminase [Escherichia coli UTI89]
gi|115515186|gb|ABJ03261.1| porphobilinogen deaminase [Escherichia coli APEC O1]
gi|226902983|gb|EEH89242.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA]
gi|294490567|gb|ADE89323.1| porphobilinogen deaminase [Escherichia coli IHE3034]
gi|307628866|gb|ADN73170.1| porphobilinogen deaminase [Escherichia coli UM146]
gi|315284723|gb|EFU44168.1| porphobilinogen deaminase [Escherichia coli MS 110-3]
Length = 320
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|215489131|ref|YP_002331562.1| porphobilinogen deaminase [Escherichia coli O127:H6 str. E2348/69]
gi|215267203|emb|CAS11651.1| hydroxymethylbilane synthase HemC [Escherichia coli O127:H6 str.
E2348/69]
Length = 320
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|331649629|ref|ZP_08350711.1| hydroxymethylbilane synthase [Escherichia coli M605]
gi|331041499|gb|EGI13647.1| hydroxymethylbilane synthase [Escherichia coli M605]
Length = 320
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEEL 301
>gi|57239097|ref|YP_180233.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|58579044|ref|YP_197256.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|57161176|emb|CAH58090.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|58417670|emb|CAI26874.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
Length = 299
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 171/296 (57%), Gaps = 9/296 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR S LA+A A E + L + P N+ I+ + T GD +L+EIGG
Sbjct: 1 MNSMNVYVGTRGSILAIAQAMEVKKLLYNYF--PDINVQIVHIVTSGDINDKISLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+
Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+
Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ +
Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA----INIGRD 291
+GSC + +A A Y TLY ++ + +F + N CDA IN+G D
Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNEEKTVFSDCYF--NECDAEISGINMGND 292
>gi|300714797|ref|YP_003739600.1| Porphobilinogen deaminase [Erwinia billingiae Eb661]
gi|299060633|emb|CAX57740.1| Porphobilinogen deaminase [Erwinia billingiae Eb661]
Length = 313
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKILRIATRQSPLALWQAHYVQQRLMACH--PGLRVELVPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KD+P +GL + RED D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLEDRADIAVHSMKDVPIAFPEGLGLVTICEREDPLDAFVSNQYDSVDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLIIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ +A L+ +N +DT V ERA L
Sbjct: 179 LGDRIRYAMPAEESLPAVGQGAVGIECRLDDAQAIALLSALNDDDTAIRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I FA +G L+ G+V + DG R G R DA +G
Sbjct: 239 EGGCQVPIGSFALLQGDELWLRGLVGSPDGTAMIRGERRGPRADAEKMG 287
>gi|218560868|ref|YP_002393781.1| porphobilinogen deaminase [Escherichia coli S88]
gi|218692081|ref|YP_002400293.1| porphobilinogen deaminase [Escherichia coli ED1a]
gi|226740633|sp|B7MH66|HEM3_ECO45 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800250|sp|B7N295|HEM3_ECO81 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218367637|emb|CAR05420.1| hydroxymethylbilane synthase [Escherichia coli S88]
gi|218429645|emb|CAR10466.1| hydroxymethylbilane synthase [Escherichia coli ED1a]
gi|323949314|gb|EGB45204.1| porphobilinogen deaminase [Escherichia coli H252]
gi|323954009|gb|EGB49807.1| porphobilinogen deaminase [Escherichia coli H263]
Length = 313
Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|330444901|ref|ZP_08308556.1| porphobilinogen deaminase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489211|dbj|GAA03053.1| porphobilinogen deaminase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 310
Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MTSQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ V D RG + TRL KL++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQIRAQRPDLIVNDLRGNVNTRLRKLDDGEYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + E P+ GQGA+ IE +++ + ++L+ +NH+ T V CERA L
Sbjct: 179 MDDRIRSEIAPETSLPAVGQGAVGIECRLDDTRVRQLLDALNHQPTATRVLCERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G A +G A +
Sbjct: 239 QGGCQVPIGSYALLEGDEIWLRALVGEPDGSKIVRAEIRGPIAQAEQLGTTLADQLLADG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKDILD 304
>gi|323964049|gb|EGB59539.1| porphobilinogen deaminase [Escherichia coli M863]
gi|327250654|gb|EGE62360.1| porphobilinogen deaminase [Escherichia coli STEC_7v]
Length = 313
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLNDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|281180853|dbj|BAI57183.1| porphobilinogen deaminase [Escherichia coli SE15]
Length = 313
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEEL 294
>gi|83590097|ref|YP_430106.1| porphobilinogen deaminase [Moorella thermoacetica ATCC 39073]
gi|123766782|sp|Q2RJ26|HEM3_MOOTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83573011|gb|ABC19563.1| hydroxymethylbilane synthase [Moorella thermoacetica ATCC 39073]
Length = 313
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 166/292 (56%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++G+R S LA ++ R + + K P + ++ L TKGD+I + L IG KGLF
Sbjct: 4 IKVGSRESELA---RWQARWVIQALEKAWPGLSCRLVTLKTKGDKILDVALARIGDKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E L+ G ID AVHS KDMPT L +GL I A PRED DV +S +L L +
Sbjct: 61 TKELELALLDGAIDLAVHSMKDMPTTLPEGLVIGAIGPREDPADVLVSPEGYTLATLPIK 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRRKA L R D+ ++D RG + TRL K+ + AI+LA AG+KRL +V
Sbjct: 121 ARVGTSSLRRKAQLAYARPDLELVDLRGNVPTRLAKMERDGLTAIVLAAAGLKRLNHGQV 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E + P+ GQGAI +E + + ELV INH T +V ERA+L L+G C
Sbjct: 181 LGEPIPYHICLPAVGQGAIGVEIRAGDRRVAELVAAINHPPTAAAVRAERAYLRALEGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IA A + + L G+V + DG+ +G+ D GR+ A+ +
Sbjct: 241 QVPIAALATVEDTALVLQGMVASLDGREMLRDIASGSTRDPEAAGRELARKL 292
>gi|260767548|ref|ZP_05876484.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972]
gi|260617448|gb|EEX42631.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972]
Length = 312
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 167/302 (55%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGKGLF
Sbjct: 6 PIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDELPHG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ E+
Sbjct: 124 AIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLQLEQR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+G C
Sbjct: 184 IRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A G L+ +V DG G R DA +G + A + +++
Sbjct: 244 QVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGARDI 303
Query: 305 FN 306
Sbjct: 304 LT 305
>gi|254435152|ref|ZP_05048659.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27]
gi|207088263|gb|EDZ65535.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27]
Length = 314
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 157/268 (58%), Gaps = 2/268 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IGGKG
Sbjct: 8 KTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIGGKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L L
Sbjct: 66 LFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLDSLP 125
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL+
Sbjct: 126 EGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRLELT 185
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A L G
Sbjct: 186 QRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNARLAG 245
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ IAG+A + L +V DG
Sbjct: 246 GCQVPIAGYAELEDERLRLRALVGQPDG 273
>gi|331685522|ref|ZP_08386106.1| hydroxymethylbilane synthase [Escherichia coli H299]
gi|331077223|gb|EGI48437.1| hydroxymethylbilane synthase [Escherichia coli H299]
Length = 313
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEEL 294
>gi|77164030|ref|YP_342555.1| porphobilinogen deaminase [Nitrosococcus oceani ATCC 19707]
gi|76882344|gb|ABA57025.1| hydroxymethylbilane synthase [Nitrosococcus oceani ATCC 19707]
Length = 310
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 157/268 (58%), Gaps = 2/268 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IGGKG
Sbjct: 4 KTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L L
Sbjct: 62 LFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLDSLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL+
Sbjct: 122 EGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRLELT 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A L G
Sbjct: 182 QRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNARLAG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ IAG+A + L +V DG
Sbjct: 242 GCQVPIAGYAELEDERLRLRALVGQPDG 269
>gi|261418339|ref|YP_003252021.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61]
gi|297529191|ref|YP_003670466.1| porphobilinogen deaminase [Geobacillus sp. C56-T3]
gi|319767702|ref|YP_004133203.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52]
gi|261374796|gb|ACX77539.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61]
gi|297252443|gb|ADI25889.1| porphobilinogen deaminase [Geobacillus sp. C56-T3]
gi|317112568|gb|ADU95060.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52]
Length = 310
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 175/291 (60%), Gaps = 7/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LAL +T+ + ++ ++ P + + TKGDR+ + TL+++GGKGLF +
Sbjct: 6 VGSRRSKLALT---QTKWVINELKQLGAPFTFEVKEIVTKGDRVLDVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL SV
Sbjct: 63 EIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLPPGSV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185
IGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ + VI
Sbjct: 123 IGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGDDVI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++G C+
Sbjct: 183 SDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+A G + +V + DGK ++ G D +GR AA +
Sbjct: 243 VPIAGYAEADGGMVRLTALVASPDGKEKYKEMVTG--ADPEAVGRQAAAVL 291
>gi|260771623|ref|ZP_05880543.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14]
gi|260613400|gb|EEX38599.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14]
Length = 312
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 167/303 (55%), Gaps = 4/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGL 63
P RI TR SPLAL A + +L H PH V ++ + T+GD + + L ++GGKGL
Sbjct: 6 PIRIATRQSPLALWQAHFVKDALQAAH---PHLAVELVTMVTRGDVLLDTPLAKVGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G D AVHS KD+P GL + RED RD F+S+T SL+ L
Sbjct: 63 FVKELEVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYHSLEALPH 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GT SLRR+ + R DI + + RG + TRL KL+ + AI+LA AG+KRLK E+
Sbjct: 123 GAIVGTCSLRRQCQIKAARPDIIIKELRGNVGTRLAKLDAGEFDAIVLAAAGLKRLKLEQ 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++ E P+ GQGA+ IE +++ + L++ +NH DT+D V CERA L G
Sbjct: 183 RIASFISPEQSLPAVGQGAVGIECRLDDQRLLTLLEPLNHADTYDRVICERAMNLTLQGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I + G ++ +V DG G R A +G + AQ + ++
Sbjct: 243 CQVPIGSYTELDGEQIWLRALVGEPDGSRIIRGEIRGPRQQAERLGVELAQQLLDQGARD 302
Query: 304 VFN 306
+ N
Sbjct: 303 ILN 305
>gi|288940050|ref|YP_003442290.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180]
gi|288895422|gb|ADC61258.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180]
Length = 308
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 166/284 (58%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ A + L +H P + II ++TKGD++ + L+++GGKGLF
Sbjct: 5 IRIATRKSPLAMWQAEHVTARLKALH--PGLTVEIIGMTTKGDQLLDSPLSKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ +++GE D AVHS KD+P + +GL ++ + RE+ D F+S+T +L +L +
Sbjct: 63 KELEQGMLAGEADIAVHSMKDVPVEFPEGLHLAVIMERENPYDAFVSNTYANLAELPEGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+ RL E I
Sbjct: 123 CVGTSSLRRQCQLADRRPDLRIEPLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFESRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ D P+ GQGAI IE V++ + +L+ + DT D V ERA A L+G C+
Sbjct: 183 RDCIDPVDSLPAIGQGAIGIECRVDDERVHQLIAPLADRDTTDRVLAERAMNARLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I G A G L G+V +DG +G R +A IG
Sbjct: 243 VPIGGHAVLDGDRLILKGLVGTTDGSRILRAEASGPRAEAEAIG 286
>gi|170680193|ref|YP_001746121.1| porphobilinogen deaminase [Escherichia coli SMS-3-5]
gi|170517911|gb|ACB16089.1| porphobilinogen deaminase [Escherichia coli SMS-3-5]
Length = 318
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299
>gi|87118400|ref|ZP_01074299.1| porphobilinogen deaminase [Marinomonas sp. MED121]
gi|86166034|gb|EAQ67300.1| porphobilinogen deaminase [Marinomonas sp. MED121]
Length = 308
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 168/289 (58%), Gaps = 2/289 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A + SL ++ P + ++ ++TKGD+I N L++IGGKGLF +E
Sbjct: 7 IATRESQLALWQANNVKDSLAALY--PDIQVELLGMTTKGDQILNSPLSKIGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P +GL ++ RED D F+S+ +L L +V+
Sbjct: 65 LEHALLDGRADIAVHSMKDVPMAFPEGLGLAVICEREDPTDAFVSNKYDNLASLPQGAVV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR + L R D+ + D RG + TRL KL+N + AI+LA AG+ RL+ IKE
Sbjct: 125 GTSSLRRSSQLALARPDLVIKDLRGNVNTRLRKLDNQEYDAIILATAGLMRLEMTDRIKE 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ +D P+ GQGA+ IE ++ +L+ + H++T+ V ERA L+G C++
Sbjct: 185 RISDQDSLPAGGQGAMGIECRSDDADMIKLLAPLQHQETYYRVTAERAVNERLNGGCQAP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IA F+ +G LY G+V + DG G++ DA +G A+ +
Sbjct: 245 IAAFSLLEGDELYLRGLVGSVDGSTILRDEIRGSKNDAHALGVQLAEKL 293
>gi|127511252|ref|YP_001092449.1| porphobilinogen deaminase [Shewanella loihica PV-4]
gi|126636547|gb|ABO22190.1| porphobilinogen deaminase [Shewanella loihica PV-4]
Length = 317
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 166/289 (57%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L H+ + ++P+STKGD I + L ++GG
Sbjct: 9 MSQNVIRIATRKSPLAMWQAEFVKAELEKAHE--GLVVELLPMSTKGDVILDTPLAKVGG 66
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ D AVHS KD+P +GL + RED RD F+S+T +++++
Sbjct: 67 KGLFVKELEVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEE 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 127 LPQGAIVGTSSLRRQCQIRAARPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++ ED P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 187 LEDRIASFISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAMNTRL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A G TL G+V DG + +G + DA +G
Sbjct: 247 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQVIRGTTSGAKQDAEQLG 295
>gi|21674248|ref|NP_662313.1| porphobilinogen deaminase [Chlorobium tepidum TLS]
gi|25453021|sp|Q8KCJ4|HEM3_CHLTE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21647416|gb|AAM72655.1| porphobilinogen deaminase [Chlorobium tepidum TLS]
Length = 312
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 159/269 (59%), Gaps = 2/269 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P NI + + T GD + + L++IG G
Sbjct: 2 KKELIIGTRSSPLALWQAEFTKAEL--SRHFPELNITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK L++ EID AVHS KD+PT +GL IS++ RED RDV IS + + LKDL
Sbjct: 60 LFTKDIEKHLLAKEIDLAVHSLKDVPTGTPEGLVISSFTKREDTRDVIISKSGKGLKDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ ++D RG + TR K ++ + A++LAYAG+ RL+
Sbjct: 120 PNARMATSSLRRMSQLLSMRPDLQILDIRGNLNTRFKKFDDGEFDAMMLAYAGVYRLEFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + P+ GQGA+ IET ++ + E+V+V+N +T ERA L L G
Sbjct: 180 DRISEILPHDVMLPAVGQGALGIETRTDDAETIEIVRVMNDSNTEICCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C+ I + TL V + DGK
Sbjct: 240 GCQIPIGCYGSYISGTLKLLAFVGSVDGK 268
>gi|188996629|ref|YP_001930880.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931696|gb|ACD66326.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 310
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 166/270 (61%), Gaps = 3/270 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L ++H I + ++ ++T+GD+I + L +IGGKGLF
Sbjct: 3 IRIGTRKSQLALWQANYIADRLREIHGI---EVELVKITTQGDKILDVPLAKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S +++ L ++
Sbjct: 60 KEIEDALLRNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIRYENIYQLPENT 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + +
Sbjct: 120 VIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSKV 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C+
Sbjct: 180 KYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGCQ 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
+ + K ++ G + +GK +++
Sbjct: 240 VPLGAYCEIKENSFIITGFIADLEGKEYYQ 269
>gi|238798585|ref|ZP_04642061.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969]
gi|238717541|gb|EEQ09381.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969]
Length = 313
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 159/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDVTRQLLAPLNHRDTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A G L+ +V A DG R G +A +G
Sbjct: 239 EGGCQVPIGSYAELAGGELWLRALVGAPDGSEIIRGERRGPAENAEQMG 287
>gi|50083560|ref|YP_045070.1| porphobilinogen deaminase [Acinetobacter sp. ADP1]
gi|55976395|sp|Q6FFA9|HEM3_ACIAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49529536|emb|CAG67248.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
sp. ADP1]
Length = 311
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 156/270 (57%), Gaps = 2/270 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +I TR SPLAL A R L ++ P + ++ T+GD+I + L +IGGKGL
Sbjct: 7 QTLKIATRQSPLALWQAEHIRDRLQALY--PELKVELVKFVTQGDKILDTPLAKIGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ S L L
Sbjct: 65 FVKELEAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNHVMSFDQLPL 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 125 GARVGTSSLRRKCQILKQRPDLEIIDLRGNVGTRLAKLDDGQYDAIVLASAGLKRLGLIS 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +N E P+ GQGA+ +E N+ K +L+ + H+ T V ERAF A L+G
Sbjct: 185 RIRHSINAEISLPAVGQGALGLECRANDKKILDLIAPLAHQPTSACVRAERAFNAYLEGG 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
C+ IAGFA L G V + DGK
Sbjct: 245 CQVPIAGFATLTQECLTLEGRVGSVDGKTL 274
>gi|308273123|emb|CBX29726.1| Porphobilinogen deaminase [uncultured Desulfobacterium sp.]
Length = 323
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 168/309 (54%), Gaps = 8/309 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IGTR S LAL A +S L V K ++ + + TKGDRI + L ++GGKG
Sbjct: 17 KRKIIIGTRGSKLALWQAEWVKSYL--VQKFTDLSVELKIIKTKGDRILDVALAKVGGKG 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L ID AVHS KDMP L GL I A RE+ RDV IS L L
Sbjct: 75 LFVKEIEQSLADSSIDIAVHSMKDMPADLHDGLCIGAIPERENPRDVLISGKGLLLSQLP 134
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A + R R D+ + RG ++TR+NKL + AI+LA AG+KRL E
Sbjct: 135 EGALVGTSSLRRIAQIKRIRPDLVIAPLRGNLDTRINKLEMGEIDAIILAAAGVKRLGLE 194
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
K+I E LN + P+ GQGA+CIE ++ + +NH T V ERAFL ++G
Sbjct: 195 KIITEYLNEDTMLPAVGQGALCIEIRKDDHDISGFINEMNHFVTRAVVLGERAFLKRIEG 254
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI------ 296
C+ IAG+ + G+V DGK ++ G+ + +IG A +
Sbjct: 255 GCQVPIAGYGKVENDIFIIRGLVADPDGKTIITDTQRGSLESSESIGAALADRLISMGAK 314
Query: 297 RFISNKNVF 305
R + N NV
Sbjct: 315 RLLDNLNVL 323
>gi|152972793|ref|YP_001337939.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|166217775|sp|A6TGI8|HEM3_KLEP7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150957642|gb|ABR79672.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 313
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 164/289 (56%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A K L+ +V A DG R G A +G
Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALG 287
>gi|116053408|ref|YP_793733.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14]
gi|122256573|sp|Q02EA3|HEM3_PSEAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115588629|gb|ABJ14644.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 313
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHSDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ IA +A +G L+ G+V DG
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268
>gi|300939977|ref|ZP_07154605.1| porphobilinogen deaminase [Escherichia coli MS 21-1]
gi|300455181|gb|EFK18674.1| porphobilinogen deaminase [Escherichia coli MS 21-1]
Length = 320
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|238892405|ref|YP_002917139.1| porphobilinogen deaminase [Klebsiella pneumoniae NTUH-K2044]
gi|329997497|ref|ZP_08302799.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3]
gi|238544721|dbj|BAH61072.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328539065|gb|EGF65104.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3]
Length = 318
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 164/289 (56%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A K L+ +V A DG R G A +G
Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALG 292
>gi|156935870|ref|YP_001439786.1| porphobilinogen deaminase [Cronobacter sakazakii ATCC BAA-894]
gi|166217766|sp|A7MQJ1|HEM3_ENTS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|156534124|gb|ABU78950.1| hypothetical protein ESA_03753 [Cronobacter sakazakii ATCC BAA-894]
Length = 313
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 161/284 (56%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL ++ S
Sbjct: 64 KELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDEMPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+ + I
Sbjct: 124 IVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L+G C+
Sbjct: 184 TSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A + L+ +V A DG R G DA +G
Sbjct: 244 VPIGSYAELRDGELWLRALVGAPDGSRIVRGERRGAPEDARQLG 287
>gi|221633109|ref|YP_002522334.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159]
gi|221155998|gb|ACM05125.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159]
Length = 560
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 160/270 (59%), Gaps = 3/270 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LALA E L + +P ++ ++P+ T GDR +LT +GG G+F
Sbjct: 5 IRIGSRGSTLALAQTEEVVERLRRL--VPECSVTVVPIVTTGDRDRATSLTVLGGSGVFA 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ + L++G ID AVHSAKD+PT+L GL + A L RED RDV ++ + L +L +
Sbjct: 63 KELHEALLAGTIDLAVHSAKDLPTQLPPGLVLVAVLAREDARDVLVTSPPRKLGELPAGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS RR+ALL R R D+ V+D RG ++TRL KL A++L AG++RL + ++
Sbjct: 123 RVGTSSRRRQALLQRARPDLIVVDIRGNVDTRLRKLREGIVDALVLGAAGLRRLSQADLV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ ++F P+PGQGA+ + ++ + EL+ ++ ++V ERAFLA C
Sbjct: 183 AEYLDPDEFVPAPGQGALAVVARESDGR-LELLSRLDEPLVHEAVAVERAFLAAFGSGCS 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
+ +A G+ L F VL DG+ +
Sbjct: 242 VPLGAYATIAGNRLRFRIAVLLPDGRFISQ 271
>gi|296392119|ref|ZP_06881594.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAb1]
Length = 313
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSALHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ IA +A +G L+ G+V DG
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268
>gi|16767209|ref|NP_462824.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194449507|ref|YP_002047954.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|207859144|ref|YP_002245795.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|6960263|gb|AAF33453.1| 89% identity with E. coli porphobilinogen deaminase (HEMC)
(SP:P06983); contains similarity to Pfam family PF01379
(Porphobilinogen deaminase), score=627.8, E=6.2e-185,
N=1 [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16422502|gb|AAL22783.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194407811|gb|ACF68030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|206710947|emb|CAR35314.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261249062|emb|CBG26922.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996216|gb|ACY91101.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160454|emb|CBW19983.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|320088349|emb|CBY98109.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|323132286|gb|ADX19716.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326625658|gb|EGE32003.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|332990774|gb|AEF09757.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 318
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S
Sbjct: 69 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+
Sbjct: 189 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 249 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 299
>gi|94987453|ref|YP_595386.1| porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00]
gi|123262097|sp|Q1MPL2|HEM3_LAWIP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94731702|emb|CAJ55065.1| Porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00]
Length = 309
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 162/287 (56%), Gaps = 3/287 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LA A + L ++ ++++I TKGD I + L ++GGKGL
Sbjct: 2 KKITIATRGSKLAFWQANYIKDQLQKMYSYLEVDLMVI--KTKGDHILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+SGE DCAVHS KD+P +L L ++A RED D+F+S +K L
Sbjct: 60 FVKEIEEALLSGEADCAVHSMKDVPMELPFELCLAAITEREDPTDMFLSIKYSGVKSLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++++GTSSLRR+A LL R D+ +I RG I+TRL KL + AI++A AGIKRL
Sbjct: 120 NALVGTSSLRRQAQLLALRPDLQIIPLRGNIDTRLRKLMAEEFDAIIMATAGIKRLGLIA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L P+ GQGA+ IE EL +NH++T+ + ER FLA LDG
Sbjct: 180 PYMSSLPCSVMLPAVGQGALGIEVQKERQDVLELFSFLNHKETYHCIQAERDFLAGLDGG 239
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C+ IAG+A CK T+ G+V SDG + + DA +IG
Sbjct: 240 CQVPIAGYATICKQETICLEGLVAKSDGSVMIRNRLERSVSDAYDIG 286
>gi|239502040|ref|ZP_04661350.1| porphobilinogen deaminase [Acinetobacter baumannii AB900]
Length = 309
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 167/291 (57%), Gaps = 2/291 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C+ IAG+A + +Y G V + DG+ +A +G + A+
Sbjct: 244 CQVPIAGYATLQDGKIYIEGRVGSVDGQTLLRAELTDEANNAQQLGENLAR 294
>gi|260551059|ref|ZP_05825263.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624]
gi|260405826|gb|EEW99314.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624]
Length = 314
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 169/293 (57%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ ++D RG + TRL+KL++ + AI+LA AG+KRL E+
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIVDLRGNVGTRLSKLDDGQYDAIILASAGLKRLGLEE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQDVLALIQPLLHTETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSPDGQTLLRAELTDEAHNAQQLGENLARNL 301
>gi|194434066|ref|ZP_03066336.1| porphobilinogen deaminase [Shigella dysenteriae 1012]
gi|194417724|gb|EDX33823.1| porphobilinogen deaminase [Shigella dysenteriae 1012]
gi|320176046|gb|EFW51115.1| Porphobilinogen deaminase [Shigella dysenteriae CDC 74-1112]
Length = 318
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299
>gi|238789375|ref|ZP_04633161.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641]
gi|238722518|gb|EEQ14172.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641]
Length = 313
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 159/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQDLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSPNYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRSAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G L+ +V A DG R G A +G
Sbjct: 239 EGGCQVPIGSYAELEGDILWLRALVGAPDGSEIIRGERRGPAQHAEQMG 287
>gi|15600453|ref|NP_253947.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAO1]
gi|107104362|ref|ZP_01368280.1| hypothetical protein PaerPA_01005437 [Pseudomonas aeruginosa PACS2]
gi|218894362|ref|YP_002443232.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58]
gi|254243856|ref|ZP_04937178.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192]
gi|12230932|sp|Q60169|HEM3_PSEAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740638|sp|B7V5F0|HEM3_PSEA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|9951571|gb|AAG08645.1|AE004938_7 porphobilinogen deaminase [Pseudomonas aeruginosa PAO1]
gi|126197234|gb|EAZ61297.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192]
gi|218774591|emb|CAW30408.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58]
Length = 313
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ IA +A +G L+ G+V DG
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268
>gi|205354497|ref|YP_002228298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205274278|emb|CAR39298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629631|gb|EGE35974.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 318
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S
Sbjct: 69 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLEPRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+
Sbjct: 189 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 249 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 299
>gi|62182409|ref|YP_218826.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167553883|ref|ZP_02347627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168244626|ref|ZP_02669558.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168263173|ref|ZP_02685146.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168467648|ref|ZP_02701485.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442426|ref|YP_002043172.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197247501|ref|YP_002148864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|213029666|ref|ZP_03344113.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213416718|ref|ZP_03349862.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213425401|ref|ZP_03358151.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649584|ref|ZP_03379637.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865139|ref|ZP_03387258.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|62130042|gb|AAX67745.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|194401089|gb|ACF61311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195630016|gb|EDX48676.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197211204|gb|ACH48601.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205321788|gb|EDZ09627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205336530|gb|EDZ23294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205348255|gb|EDZ34886.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|322716902|gb|EFZ08473.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 320
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S
Sbjct: 71 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+
Sbjct: 191 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 251 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 301
>gi|113460193|ref|YP_718250.1| porphobilinogen deaminase [Haemophilus somnus 129PT]
gi|170718229|ref|YP_001785251.1| porphobilinogen deaminase [Haemophilus somnus 2336]
gi|123131907|sp|Q0I178|HEM3_HAES1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058918|sp|B0UWZ8|HEM3_HAES2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112822236|gb|ABI24325.1| hydroxymethylbilane synthase (porphobilinogen deaminase, PGB)
[Haemophilus somnus 129PT]
gi|168826358|gb|ACA31729.1| porphobilinogen deaminase [Haemophilus somnus 2336]
Length = 321
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A ++ L + ++ ++P+ TKGD I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQANYVKNRLQ--QRYSHLSVELVPIITKGDVILDTPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L++GE D AVHS KD+P + KGL++S PRED RD F+S+ ++L +L
Sbjct: 63 FVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLDELPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ L WR+D+ + RG + TRLNKL+ AI+LA AG+ RL +
Sbjct: 123 GAIVGTSSLRRQCQLKNWRADLDIRSLRGNVGTRLNKLDQGDYDAIILASAGLIRLGLTE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + I+ P+ GQGA+ IE V++ Q L+ + + T V ERA L G
Sbjct: 183 RIRSFIEIDTILPACGQGAVGIECRVDDRDVQSLLMPLADQTTTYCVLAERAMNFHLQGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIV 265
C+ I +A + + LY G+V
Sbjct: 243 CQVPIGAYAILENNQLYLRGLV 264
>gi|254238043|ref|ZP_04931366.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719]
gi|126169974|gb|EAZ55485.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719]
Length = 313
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ IA +A +G L+ G+V DG
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268
>gi|325124236|gb|ADY83759.1| porphobilinogen deaminase [Acinetobacter calcoaceticus PHEA-2]
Length = 309
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 168/293 (57%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ ++ DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNRFETFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G
Sbjct: 184 RIRHCLTPDISLPAVGQGALGLECRAVDQDVLALIQPLLHEETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 244 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNL 296
>gi|16762196|ref|NP_457813.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143685|ref|NP_807027.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415793|ref|YP_152868.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194734788|ref|YP_002116870.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197264899|ref|ZP_03164973.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197301061|ref|ZP_02663450.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197364723|ref|YP_002144360.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243181|ref|YP_002217871.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205358019|ref|ZP_02574964.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205360118|ref|ZP_02834695.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|224585757|ref|YP_002639556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912944|ref|ZP_04656781.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289825622|ref|ZP_06544800.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|61225723|sp|P0A1Q8|HEM3_SALTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|61225724|sp|P0A1Q9|HEM3_SALTI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81599707|sp|Q5PKL7|HEM3_SALPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706297|sp|B5FN93|HEM3_SALDC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059000|sp|B5BIU8|HEM3_SALPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059001|sp|B4TNV3|HEM3_SALSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800257|sp|C0Q3B3|HEM3_SALPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|25292188|pir||AD0920 porphobilinogen deaminase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16504500|emb|CAD09382.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139320|gb|AAO70887.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56130050|gb|AAV79556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194710290|gb|ACF89511.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197096200|emb|CAR61796.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197243154|gb|EDY25774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288774|gb|EDY28149.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937697|gb|ACH75030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205328154|gb|EDZ14918.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205340974|gb|EDZ27738.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|224470285|gb|ACN48115.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|312915057|dbj|BAJ39031.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225457|gb|EFX50514.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613018|gb|EFY09969.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617394|gb|EFY14294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625614|gb|EFY22436.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627037|gb|EFY23830.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631247|gb|EFY28010.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638280|gb|EFY34979.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642784|gb|EFY39371.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646974|gb|EFY43476.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650361|gb|EFY46774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656348|gb|EFY52642.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657573|gb|EFY53843.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665984|gb|EFY62165.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666723|gb|EFY62900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671034|gb|EFY67164.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679259|gb|EFY75311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681663|gb|EFY77690.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686010|gb|EFY81998.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192636|gb|EFZ77864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196502|gb|EFZ81652.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203746|gb|EFZ88767.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323205379|gb|EFZ90353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323210748|gb|EFZ95624.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215916|gb|EGA00649.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221409|gb|EGA05827.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227573|gb|EGA11729.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231758|gb|EGA15869.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236173|gb|EGA20250.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239590|gb|EGA23638.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244314|gb|EGA28322.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249589|gb|EGA33501.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250319|gb|EGA34205.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256526|gb|EGA40257.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259776|gb|EGA43409.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265184|gb|EGA48682.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268387|gb|EGA51859.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 313
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S
Sbjct: 64 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+
Sbjct: 184 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 244 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 294
>gi|261867394|ref|YP_003255316.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412726|gb|ACX82097.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 308
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 159/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG
Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDLLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQLKTLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L
Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I G+A + S LY +V + DG
Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDG 268
>gi|307140503|ref|ZP_07499859.1| porphobilinogen deaminase [Escherichia coli H736]
Length = 318
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299
>gi|49085204|gb|AAT51260.1| PA5260 [synthetic construct]
Length = 314
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ IA +A +G L+ G+V DG
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268
>gi|261345249|ref|ZP_05972893.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541]
gi|282566947|gb|EFB72482.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541]
Length = 314
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 162/265 (61%), Gaps = 2/265 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A+ ++ L +H P + ++P+ TKGD I + L ++GGKGLF
Sbjct: 7 VRIATRKSPLALWQAYFVKAKLEQLH--PNLQVELVPMVTKGDIILDTPLAKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ +L S
Sbjct: 65 KELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDELPAGS 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+ ++ I
Sbjct: 125 IVGTSSLRRQCQLKELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLELDERI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K L E P+ GQGA+ IE +++ + ++L+ +NH++T V ERA L+G C+
Sbjct: 185 KTALEPELSLPAVGQGAVGIECRLDDQRTRDLLAKLNHDETSICVLAERAMNMRLEGGCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I +A + + ++ +V A DG
Sbjct: 245 VPIGSYAIWQDNKIWLRALVGAPDG 269
>gi|193067963|ref|ZP_03048928.1| porphobilinogen deaminase [Escherichia coli E110019]
gi|192958583|gb|EDV89021.1| porphobilinogen deaminase [Escherichia coli E110019]
Length = 318
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299
>gi|187733255|ref|YP_001882498.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94]
gi|187430247|gb|ACD09521.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94]
Length = 320
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|238765355|ref|ZP_04626280.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638]
gi|238696442|gb|EEP89234.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638]
Length = 313
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 163/293 (55%), Gaps = 2/293 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSNYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDYTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+G C+ I +A G+TL+ +V A DG R G +A +G + A
Sbjct: 239 EGGCQVPIGSYAELDGNTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELA 291
>gi|329297028|ref|ZP_08254364.1| porphobilinogen deaminase [Plautia stali symbiont]
Length = 313
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 159/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLNKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELMPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ S+
Sbjct: 59 KGLFVKELELAMLENRADMAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNHYSSIDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQISARRPDLVIHSLRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L E P+ GQGA+ IE +++ L++ +NH DT V ERA L
Sbjct: 179 LEDRIRQALPAEFSLPAVGQGAVGIECRLDDQPLITLLQALNHSDTAVCVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I FA + L+ G+V A DG R G R A +G
Sbjct: 239 EGGCQVPIGSFAVLEDDQLWLRGLVGAPDGSQMVVGERRGPREQAEQMG 287
>gi|200388118|ref|ZP_03214730.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605216|gb|EDZ03761.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 320
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S
Sbjct: 71 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+
Sbjct: 191 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 251 VPIGSYAEIINGEIWLRALVGAPDGSVIVRGERRGSPEQAEQMGISLAEEL 301
>gi|187776117|ref|ZP_02800653.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196]
gi|188025006|ref|ZP_02775407.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113]
gi|189010242|ref|ZP_02805709.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076]
gi|189401833|ref|ZP_02778707.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401]
gi|189403100|ref|ZP_02793091.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486]
gi|189404376|ref|ZP_02788935.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501]
gi|189404861|ref|ZP_02811648.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869]
gi|208806069|ref|ZP_03248406.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206]
gi|208812922|ref|ZP_03254251.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045]
gi|208819553|ref|ZP_03259873.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042]
gi|209396873|ref|YP_002273321.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115]
gi|217324566|ref|ZP_03440650.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588]
gi|261225578|ref|ZP_05939859.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK2000]
gi|261255624|ref|ZP_05948157.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK966]
gi|187768841|gb|EDU32685.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196]
gi|188015439|gb|EDU53561.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113]
gi|189001539|gb|EDU70525.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076]
gi|189359021|gb|EDU77440.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401]
gi|189362764|gb|EDU81183.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486]
gi|189365984|gb|EDU84400.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501]
gi|189373238|gb|EDU91654.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869]
gi|208725870|gb|EDZ75471.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206]
gi|208734199|gb|EDZ82886.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045]
gi|208739676|gb|EDZ87358.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042]
gi|209158273|gb|ACI35706.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115]
gi|217320787|gb|EEC29211.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588]
gi|320191103|gb|EFW65753.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. EC1212]
gi|320666093|gb|EFX33107.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. LSU-61]
gi|326344260|gb|EGD68020.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1125]
gi|326347912|gb|EGD71626.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1044]
Length = 318
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299
>gi|147677307|ref|YP_001211522.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI]
gi|189028095|sp|A5D3L5|HEM3_PELTS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146273404|dbj|BAF59153.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI]
Length = 312
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 166/294 (56%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +GTR S LA+ A L ++ P + I+ + T GDRI + L +IG KG
Sbjct: 2 KREIAVGTRVSKLAMWQARWVVDRLKEL--CPGCSFRIVGIRTLGDRILDAALVKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GEID AVHS KD+PT+L +GL I A RE DV +S + L +L
Sbjct: 60 LFTKELEAAMLRGEIDMAVHSMKDLPTELPEGLVIGAVCKREHPADVLVSRRGKKLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL +R D+ +++ RG I TRL KL A +LAYAG+ R+ ++
Sbjct: 120 GGALVGTSSLRRCAQLLWYRDDLRMVNLRGNINTRLRKLEEENLDAAVLAYAGLFRMGRQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +++ + P+ GQG+I +E ++ + ELVK I+H ++ +V ERAFL L+G
Sbjct: 180 DAITQVIPFDICLPAVGQGSIGVEVRSDDGEVLELVKKIDHRESRLAVFAERAFLRRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ + + L G+V DGK GN DA IG A+ +
Sbjct: 240 GCQVPVGALGTVENDRLRLEGVVATPDGKQLVRSFVEGNGGDAAAIGLRLAEKL 293
>gi|126653692|ref|ZP_01725611.1| porphobilinogen deaminase [Bacillus sp. B14905]
gi|126589729|gb|EAZ83864.1| porphobilinogen deaminase [Bacillus sp. B14905]
Length = 310
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 167/301 (55%), Gaps = 8/301 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + L P + + TKGD+I + L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWFINELKAAG--APFEFEVKEIVTKGDQILDVQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L EID AVHS KDMP L +GL I PRED RD FIS DL +V+
Sbjct: 64 IEQALYDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFADLPAGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL E V+
Sbjct: 124 GTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSEDVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L++ED P+ QG++ IE ++ + + + + TW + ERAFLA +DG C+
Sbjct: 184 EFLSVEDCLPAVAQGSLGIECRGDDTELLAELAKLTDQLTWQEAHAERAFLAAMDGGCQV 243
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IAG+A G + G+V A D + ++ + G+ DA IG + A ++ + F+
Sbjct: 244 PIAGYATSNGDEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELAT---ILTKQGAFD 298
Query: 307 F 307
Sbjct: 299 L 299
>gi|238897905|ref|YP_002923584.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259647800|sp|C4K4E3|HEM3_HAMD5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229465662|gb|ACQ67436.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 309
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 160/293 (54%), Gaps = 2/293 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+ TR SPLAL A ++ L H P ++++P+ T+GD I L++ GG
Sbjct: 1 MSNNMIRLATRQSPLALWQAHYVKTGLEFFH--PDLKVILLPMVTQGDNILGTALSKTGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KDMP +GL + A RED RD F+S +
Sbjct: 59 KGLFVKELERAVLDNRADIAVHSIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + I V D RG + RL KL+ AI+LA AG+KRL
Sbjct: 119 LPEGSVVGTSSLRRQCQLYKNYPGIVVRDLRGNVGARLKKLDQGDYDAIVLAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + +IL E P+ GQGAI IE +++ + V +NH + ++CERA L L
Sbjct: 179 LENRMTQILRPETSLPAAGQGAIGIECRLDDTVTLQRVATLNHRPSQLKISCERALLKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+G C++ I +A + L+ V A DG++ + R GN A IG + A
Sbjct: 239 EGGCQTPIGSYAEIENDELWLRAFVGAPDGQLIIDGERRGNFDSAEKIGFELA 291
>gi|331660148|ref|ZP_08361084.1| hydroxymethylbilane synthase [Escherichia coli TA206]
gi|320185465|gb|EFW60234.1| Porphobilinogen deaminase [Shigella flexneri CDC 796-83]
gi|331052716|gb|EGI24751.1| hydroxymethylbilane synthase [Escherichia coli TA206]
gi|332084681|gb|EGI89869.1| porphobilinogen deaminase [Shigella boydii 5216-82]
gi|332084931|gb|EGI90113.1| porphobilinogen deaminase [Shigella dysenteriae 155-74]
Length = 313
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|82546156|ref|YP_410103.1| porphobilinogen deaminase [Shigella boydii Sb227]
gi|300904058|ref|ZP_07121938.1| porphobilinogen deaminase [Escherichia coli MS 84-1]
gi|301303699|ref|ZP_07209820.1| porphobilinogen deaminase [Escherichia coli MS 124-1]
gi|81247567|gb|ABB68275.1| porphobilinogen deaminase [Shigella boydii Sb227]
gi|300403938|gb|EFJ87476.1| porphobilinogen deaminase [Escherichia coli MS 84-1]
gi|300840999|gb|EFK68759.1| porphobilinogen deaminase [Escherichia coli MS 124-1]
gi|315254168|gb|EFU34136.1| porphobilinogen deaminase [Escherichia coli MS 85-1]
gi|315296783|gb|EFU56075.1| porphobilinogen deaminase [Escherichia coli MS 16-3]
Length = 320
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|332998254|gb|EGK17856.1| porphobilinogen deaminase [Shigella flexneri K-272]
gi|333013794|gb|EGK33157.1| porphobilinogen deaminase [Shigella flexneri K-227]
Length = 313
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|157163278|ref|YP_001460596.1| porphobilinogen deaminase [Escherichia coli HS]
gi|170022172|ref|YP_001727126.1| porphobilinogen deaminase [Escherichia coli ATCC 8739]
gi|188494806|ref|ZP_03002076.1| porphobilinogen deaminase [Escherichia coli 53638]
gi|254039017|ref|ZP_04873068.1| porphobilinogen deaminase [Escherichia sp. 1_1_43]
gi|300950432|ref|ZP_07164354.1| porphobilinogen deaminase [Escherichia coli MS 116-1]
gi|300955191|ref|ZP_07167588.1| porphobilinogen deaminase [Escherichia coli MS 175-1]
gi|301646129|ref|ZP_07246029.1| porphobilinogen deaminase [Escherichia coli MS 146-1]
gi|331644538|ref|ZP_08345658.1| hydroxymethylbilane synthase [Escherichia coli H736]
gi|157068958|gb|ABV08213.1| porphobilinogen deaminase [Escherichia coli HS]
gi|169757100|gb|ACA79799.1| porphobilinogen deaminase [Escherichia coli ATCC 8739]
gi|188490005|gb|EDU65108.1| porphobilinogen deaminase [Escherichia coli 53638]
gi|226838708|gb|EEH70736.1| porphobilinogen deaminase [Escherichia sp. 1_1_43]
gi|260451352|gb|ACX41774.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|300317908|gb|EFJ67692.1| porphobilinogen deaminase [Escherichia coli MS 175-1]
gi|300450239|gb|EFK13859.1| porphobilinogen deaminase [Escherichia coli MS 116-1]
gi|301075655|gb|EFK90461.1| porphobilinogen deaminase [Escherichia coli MS 146-1]
gi|315138381|dbj|BAJ45540.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|331036210|gb|EGI08445.1| hydroxymethylbilane synthase [Escherichia coli H736]
Length = 320
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|49176416|ref|YP_026260.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|89110215|ref|AP_003995.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
W3110]
gi|170083288|ref|YP_001732608.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238902882|ref|YP_002928678.1| hydroxymethylbilane synthase [Escherichia coli BW2952]
gi|256026151|ref|ZP_05440016.1| porphobilinogen deaminase [Escherichia sp. 4_1_40B]
gi|312971913|ref|ZP_07786087.1| porphobilinogen deaminase [Escherichia coli 1827-70]
gi|2506504|sp|P06983|HEM3_ECOLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229836108|sp|B1XAH2|HEM3_ECODH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|259647795|sp|C4ZZ69|HEM3_ECOBW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4388845|pdb|2YPN|A Chain A, Hydroxymethylbilane Synthase
gi|28373294|pdb|1GTK|A Chain A, Time-Resolved And Static-Ensemble Structural Chemistry Of
Hydroxymethylbilane Synthase
gi|41666|emb|CAA31132.1| unnamed protein product [Escherichia coli]
gi|48994974|gb|AAT48218.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|85676246|dbj|BAE77496.1| hydroxymethylbilane synthase [Escherichia coli str. K12 substr.
W3110]
gi|169891123|gb|ACB04830.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238861470|gb|ACR63468.1| hydroxymethylbilane synthase [Escherichia coli BW2952]
gi|309704240|emb|CBJ03588.1| porphobilinogen deaminase [Escherichia coli ETEC H10407]
gi|310334290|gb|EFQ00495.1| porphobilinogen deaminase [Escherichia coli 1827-70]
gi|315618498|gb|EFU99084.1| porphobilinogen deaminase [Escherichia coli 3431]
gi|323934193|gb|EGB30624.1| porphobilinogen deaminase [Escherichia coli E1520]
gi|323938941|gb|EGB35160.1| porphobilinogen deaminase [Escherichia coli E482]
gi|332345783|gb|AEE59117.1| porphobilinogen deaminase HemC [Escherichia coli UMNK88]
Length = 313
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|168801133|ref|ZP_02826140.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508]
gi|195938092|ref|ZP_03083474.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4024]
gi|218707439|ref|YP_002414958.1| porphobilinogen deaminase [Escherichia coli UMN026]
gi|254795801|ref|YP_003080638.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14359]
gi|293413246|ref|ZP_06655908.1| porphobilinogen deaminase [Escherichia coli B354]
gi|298383172|ref|ZP_06992766.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302]
gi|331665450|ref|ZP_08366349.1| hydroxymethylbilane synthase [Escherichia coli TA143]
gi|23821693|sp|Q8XAP3|HEM3_ECO57 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740636|sp|B7NFA7|HEM3_ECOLU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189376679|gb|EDU95095.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508]
gi|218434536|emb|CAR15462.1| hydroxymethylbilane synthase [Escherichia coli UMN026]
gi|254595201|gb|ACT74562.1| hydroxymethylbilane synthase [Escherichia coli O157:H7 str.
TW14359]
gi|284923908|emb|CBG37007.1| porphobilinogen deaminase [Escherichia coli 042]
gi|291468194|gb|EFF10691.1| porphobilinogen deaminase [Escherichia coli B354]
gi|298276408|gb|EFI17927.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302]
gi|320639287|gb|EFX08909.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. G5101]
gi|320644672|gb|EFX13722.1| porphobilinogen deaminase [Escherichia coli O157:H- str. 493-89]
gi|320649997|gb|EFX18500.1| porphobilinogen deaminase [Escherichia coli O157:H- str. H 2687]
gi|320655343|gb|EFX23285.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|323974386|gb|EGB69514.1| porphobilinogen deaminase [Escherichia coli TW10509]
gi|331057348|gb|EGI29337.1| hydroxymethylbilane synthase [Escherichia coli TA143]
Length = 313
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|15804393|ref|NP_290433.1| porphobilinogen deaminase [Escherichia coli O157:H7 EDL933]
gi|15833989|ref|NP_312762.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai]
gi|300900647|ref|ZP_07118805.1| porphobilinogen deaminase [Escherichia coli MS 198-1]
gi|301025752|ref|ZP_07189267.1| porphobilinogen deaminase [Escherichia coli MS 69-1]
gi|331655487|ref|ZP_08356480.1| hydroxymethylbilane synthase [Escherichia coli M718]
gi|331675273|ref|ZP_08376024.1| hydroxymethylbilane synthase [Escherichia coli TA280]
gi|12518669|gb|AAG58997.1|AE005611_7 porphobilinogen deaminase = hydroxymethylbilane synthase
[Escherichia coli O157:H7 str. EDL933]
gi|13364211|dbj|BAB38158.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai]
gi|209753308|gb|ACI74961.1| adenylate cyclase [Escherichia coli]
gi|209753310|gb|ACI74962.1| adenylate cyclase [Escherichia coli]
gi|209753312|gb|ACI74963.1| adenylate cyclase [Escherichia coli]
gi|209753316|gb|ACI74965.1| adenylate cyclase [Escherichia coli]
gi|300355863|gb|EFJ71733.1| porphobilinogen deaminase [Escherichia coli MS 198-1]
gi|300395875|gb|EFJ79413.1| porphobilinogen deaminase [Escherichia coli MS 69-1]
gi|320660969|gb|EFX28412.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. USDA 5905]
gi|331046808|gb|EGI18892.1| hydroxymethylbilane synthase [Escherichia coli M718]
gi|331067559|gb|EGI38963.1| hydroxymethylbilane synthase [Escherichia coli TA280]
Length = 320
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|237727921|ref|ZP_04558402.1| porphobilinogen deaminase [Citrobacter sp. 30_2]
gi|226910370|gb|EEH96288.1| porphobilinogen deaminase [Citrobacter sp. 30_2]
Length = 318
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL +L S
Sbjct: 69 KELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNSLDELPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+KRL E +
Sbjct: 129 IVGTSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLESRV 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L+G C+
Sbjct: 189 RTALPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAEIIDGEIWLRALVGAPDGSQMVCGERRGATQDAEQMGISLAEEL 299
>gi|152983553|ref|YP_001351322.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7]
gi|167008817|sp|A6VE37|HEM3_PSEA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150958711|gb|ABR80736.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7]
Length = 313
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 156/270 (57%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PDLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L+ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADADLHALLAPLHHADTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ IA +A +G L+ G+V DG
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268
>gi|58617102|ref|YP_196301.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel]
gi|58416714|emb|CAI27827.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel]
Length = 299
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 171/296 (57%), Gaps = 9/296 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR S LA+A A + + L + P N+ I+ + T GD +L+EIGG
Sbjct: 1 MNSMNVYLGTRGSILAIAQAMKVKKLLYNYF--PDINVQIVHIVTSGDINDKISLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+
Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+
Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ +
Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA----INIGRD 291
+GSC + +A A Y TLY ++ + +F + N CDA IN+G D
Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNEEKTVFSDCYF--NECDAEISGINMGND 292
>gi|27117223|emb|CAD48146.1| porphobilinogen deaminase [Bacillus megaterium]
Length = 310
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 169/292 (57%), Gaps = 8/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LAL +T+ + + K P I + TKGD+I N TL+++GGKGLF +
Sbjct: 6 VGSRRSKLALT---QTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L +V
Sbjct: 63 EIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VI 185
IGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ K +
Sbjct: 123 IGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G C+
Sbjct: 183 TQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGCQ 242
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+ G + +V + DGK ++ G D I IG +AA+ +
Sbjct: 243 VPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--DPIAIGSEAAERL 292
>gi|302381524|ref|YP_003817347.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264]
gi|302192152|gb|ADK99723.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264]
Length = 315
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 154/265 (58%), Gaps = 1/265 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA + + ++ ++P +V++ + T GD+I +R L E+GGK LFT
Sbjct: 4 IRIGTRRSALALAQSGMMQRAIAAAMQLPIEEVVLVEIVTTGDQIQDRRLMEVGGKALFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G +D AVHS KD+P + GL I+A RED RD FIS L+ L
Sbjct: 64 KEIEEALLDGRVDIAVHSMKDVPAEQPPGLTIAAIPEREDARDAFISRDFDELEHLPHGG 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRR+A L R D+ + RG I+TRL + AILLA +G+ RL + +
Sbjct: 124 RLGTASLRRQAQALALRPDLQIEMLRGNIDTRLRRAAEGDFDAILLAASGLNRLGRSDAV 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+++ F P+PGQGA+ ++T + V+ +NH T V ER + L+GSC+
Sbjct: 184 RGFLSVDAFLPAPGQGALALQTREGDTD-HAWVQAMNHGPTALCVAAERGAMVALEGSCR 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
+A+ A+ G L +LA DG
Sbjct: 243 TAVGAHAHIDGDRLTLTTEMLAPDG 267
>gi|268592915|ref|ZP_06127136.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131]
gi|291311707|gb|EFE52160.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131]
Length = 314
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 165/291 (56%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L +H P + ++P+ TKGD I + L ++GGKGLF
Sbjct: 7 VRIATRKSPLALWQAHFVKDKLEQLH--PGLLVELVPMVTKGDIILDTPLAKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ +L+ L S
Sbjct: 65 KELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDNLEALPEGS 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 125 IVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLETRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K L E P+ GQGA+ IE +N+ K +EL+ +N++ T V ERA L+G C+
Sbjct: 185 KTALAPEQCLPAVGQGAVGIECRLNDSKTRELLAKLNNDATSTCVLAERAMNMRLEGGCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A + ++ +V A DG + R + +A G A+ +
Sbjct: 245 VPIGSYAIWQDDKIWLRALVGAPDGSVIIRGERRVSPSEANQAGVSLAEEL 295
>gi|110807507|ref|YP_691027.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401]
gi|110617055|gb|ABF05722.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401]
gi|281603194|gb|ADA76178.1| Porphobilinogen deaminase [Shigella flexneri 2002017]
Length = 320
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|238760184|ref|ZP_04621331.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236]
gi|238701620|gb|EEP94190.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236]
Length = 313
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 158/289 (54%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSHFAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLVIRDLRGNVGTRLAKLDKGEYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A G TL+ +V A DG R G +A +G
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPVANAEQMG 287
>gi|169829410|ref|YP_001699568.1| porphobilinogen deaminase [Lysinibacillus sphaericus C3-41]
gi|238058924|sp|B1HVD6|HEM3_LYSSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|168993898|gb|ACA41438.1| Porphobilinogen deaminase [Lysinibacillus sphaericus C3-41]
Length = 310
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 168/301 (55%), Gaps = 8/301 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + L P + + TKGD+I + L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWFINELKAAG--APFEFEVKEIVTKGDQILDVQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L EID AVHS KDMP L +GL I PRED RD FIS +L +V+
Sbjct: 64 IEQALYEKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFSELPAGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL E V+
Sbjct: 124 GTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSEDVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L++ED P+ QG++ IE ++ + + + + + TW + ERAFLA +DG C+
Sbjct: 184 EFLSVEDCLPAVAQGSLGIECREDDTELLDELAKLTDQLTWQEAHAERAFLAAMDGGCQV 243
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IAG+A G + G+V A D + ++ + G+ DA IG + A ++ + F+
Sbjct: 244 PIAGYATSNGEEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELAT---ILTKQGAFD 298
Query: 307 F 307
Sbjct: 299 L 299
>gi|30064902|ref|NP_839073.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T]
gi|56480439|ref|NP_709607.2| porphobilinogen deaminase [Shigella flexneri 2a str. 301]
gi|61213578|sp|Q83PH4|HEM3_SHIFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30043162|gb|AAP18884.1| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella
flexneri 2a str. 2457T]
gi|56383990|gb|AAN45314.2| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella
flexneri 2a str. 301]
gi|313647157|gb|EFS11612.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T]
gi|332751946|gb|EGJ82341.1| porphobilinogen deaminase [Shigella flexneri 2747-71]
gi|332996995|gb|EGK16613.1| porphobilinogen deaminase [Shigella flexneri VA-6]
gi|332997894|gb|EGK17501.1| porphobilinogen deaminase [Shigella flexneri K-218]
gi|333019501|gb|EGK38782.1| porphobilinogen deaminase [Shigella flexneri K-304]
Length = 313
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|293393888|ref|ZP_06638195.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582]
gi|291423715|gb|EFE96937.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582]
Length = 313
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PDLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL + R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPAGLGLVTICERDDPRDAFVSNRFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRQRRPDLLVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NHE T V ERA L
Sbjct: 179 LEQRIRSPMSPEESLPAVGQGAVGIECRLDDAVTRALLAPLNHELTATRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL+ +V A DG + R G A ++G + A+ +
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSLMVRGERRGPAAQAEHMGIELAEELLAKG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|293407432|ref|ZP_06651352.1| porphobilinogen deaminase [Escherichia coli FVEC1412]
gi|291425543|gb|EFE98581.1| porphobilinogen deaminase [Escherichia coli FVEC1412]
Length = 313
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESHI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|82779017|ref|YP_405366.1| porphobilinogen deaminase [Shigella dysenteriae Sd197]
gi|81243165|gb|ABB63875.1| porphobilinogen deaminase [Shigella dysenteriae Sd197]
Length = 320
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLVALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|114561627|ref|YP_749140.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400]
gi|122300909|sp|Q088L3|HEM3_SHEFN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114332920|gb|ABI70302.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400]
Length = 309
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L +IGG
Sbjct: 1 MSENIIRIATRKSPLAMWQAEFVKAELERIH--PGLTVELLPMSTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDLPVEFPEGLGLQVICEREDPRDAFVSNNYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LNERIANFISAEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G L G+V DG + +G++ DA+ +G A+ +
Sbjct: 239 EGGCQVPIGAFAEINGDNLTLRGLVGNPDGSQIIIGTVSGSKTDAVALGESLAEDLLSRG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|320178095|gb|EFW53075.1| Porphobilinogen deaminase [Shigella boydii ATCC 9905]
Length = 559
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 158/284 (55%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A ++ +V A DG R G DA +G
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMG 287
>gi|317046390|ref|YP_004114038.1| porphobilinogen deaminase [Pantoea sp. At-9b]
gi|316948007|gb|ADU67482.1| porphobilinogen deaminase [Pantoea sp. At-9b]
Length = 313
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 159/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELVPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ S+
Sbjct: 59 KGLFVKELELAMLENRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNHYDSIDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + L++ +N DT V ERA L
Sbjct: 179 LEDRIRFALPAEISLPAVGQGAVGIECRLDDAELITLLQALNDGDTAVCVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I FA +G L+ G+V + DG R G R A +G
Sbjct: 239 EGGCQVPIGSFAVLEGDQLWLRGLVGSPDGSQMITGERRGPRDQAEQMG 287
>gi|159900065|ref|YP_001546312.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779]
gi|159893104|gb|ABX06184.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779]
Length = 300
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 163/289 (56%), Gaps = 3/289 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL R +L+ H P I + ++TKGD I +R L IG KGLF E
Sbjct: 6 IGTRKSQLALVQTHAMRDALLAAH--PQLTIELEHITTKGDAILDRPLAAIGDKGLFVSE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE + +G++D AVHSAKD+P+ L + I+AY R D RDV + + L DL + +
Sbjct: 64 IEDAMRNGKVDLAVHSAKDLPSILAPDMTIAAYPERADPRDVLVGAEGRRLADLVPGAKV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS RR A L R D+++ID RG ++TRL KL+ + AI+LA AG++RL K + +
Sbjct: 124 GTSSPRRAAQLRHLRPDLTIIDIRGNVDTRLRKLDEGQYDAIVLAAAGLQRLGLLKRVTQ 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ P+ QG + IE + + +L+KV++H ++ + E+AFLA + G C+ A
Sbjct: 184 FFEPAEMTPAVSQGILGIEARAGDQRVADLLKVLDHAESRATAEAEKAFLATIGGGCQVA 243
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ FA + L+ G++ A DG++ G+ A +G AQ +
Sbjct: 244 VGAFATYQIGQLHLIGMIGALDGRLVRG-ELTGSASTAQALGTSLAQQL 291
>gi|24375795|ref|NP_719838.1| porphobilinogen deaminase [Shewanella oneidensis MR-1]
gi|39931562|sp|Q8E9H0|HEM3_SHEON RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|24350743|gb|AAN57282.1|AE015863_11 porphobilinogen deaminase [Shewanella oneidensis MR-1]
Length = 310
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|209693832|ref|YP_002261760.1| porphobilinogen deaminase [Aliivibrio salmonicida LFI1238]
gi|226706282|sp|B6EPK1|HEM3_ALISL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|208007783|emb|CAQ77905.1| porphobilinogen deaminase HemC [Aliivibrio salmonicida LFI1238]
Length = 311
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L +IGGK
Sbjct: 3 QQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P + +GL + R D RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGDPRDAFVSNTYNNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT SLRR+ L +R D+ + + RG + TRL KL++ AI+LA AG+ RL
Sbjct: 121 PQGATVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK + E P+ GQGA+ IET +N+ + + L+ +NH +T V CERA L+
Sbjct: 181 EDRIKSSIEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNHPETAHRVLCERAMNNRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG I G DA +G A+ +
Sbjct: 241 GGCQVPIGSYSLIDGDQIWLRALVGEPDGSIMVRGETTGPVSDAEELGTKLAEQLLNDGA 300
Query: 302 KNVFN 306
K++ +
Sbjct: 301 KDILD 305
>gi|117924047|ref|YP_864664.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1]
gi|117607803|gb|ABK43258.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1]
Length = 314
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 167/289 (57%), Gaps = 4/289 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL-STKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ A +S L H P IV + L TKGD+I + L ++GGKGLF
Sbjct: 7 VRIGTRGSALAVWQAEWVKSQLQAHH---PGIIVELELIKTKGDKILDVPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ ++ G +D AVHS KD+P + GL + L RED RD +S QSL +L
Sbjct: 64 VKELEEAMLDGRVDLAVHSMKDVPAEFPDGLMLGPILKREDPRDALLSIHYQSLAELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++IG+SSLRR++ + R D+ + RG + TR+ KL + AI+LA AG+KRL +
Sbjct: 124 ALIGSSSLRRQSQIKAKRPDLRLDWLRGNVGTRIQKLVEGQFDAIILAAAGVKRLGLTEH 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + L E+ P+ GQGA+ IE V++ + L+ + H++T V ERAFLA+L+G C
Sbjct: 184 VVQYLEPEEMLPAVGQGAVGIEHRVDDARIATLLAPLYHKETHSCVTAERAFLAKLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ IAG+A TL G+V +G + G R DA +G+ A
Sbjct: 244 QVPIAGYATLHEDTLTLRGLVAEVEGGRVVQAQCQGPRADAYRMGQQLA 292
>gi|301029020|ref|ZP_07192174.1| porphobilinogen deaminase [Escherichia coli MS 196-1]
gi|299878014|gb|EFI86225.1| porphobilinogen deaminase [Escherichia coli MS 196-1]
Length = 320
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSDNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|238750675|ref|ZP_04612174.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380]
gi|238711065|gb|EEQ03284.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380]
Length = 313
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLNKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LKSRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLVPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G TL+ +V A DG R G DA +G
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSEIIRGERRGPAEDAEQMG 287
>gi|58585034|ref|YP_198607.1| porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419350|gb|AAW71365.1| Porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 292
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 167/288 (57%), Gaps = 8/288 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RIGTR S LA+A A E + L+D+ ++ II + T GD+ N L EIGGKGLF +
Sbjct: 4 RIGTRGSSLAIAQALEAKQKLLDLF--SSLSVEIIKIKTSGDKYANANLAEIGGKGLFIK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +LI ID AVHS KD+P K L I L R D FIS+ +SLK L ++
Sbjct: 62 EIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQAI 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TSS+RRK LL +R D++++ RG + TR L N I+LA AG+ RLKK+ +I
Sbjct: 122 IATSSIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLKKDYLIT 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L+ + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC +
Sbjct: 179 EVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCFT 238
Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+A A Y + L+ Y ++ +D K + R DA +G DA
Sbjct: 239 PLAALAKYVSENVLHLYCML--ADKKNIYFTERTSFVEDAEKMGMDAG 284
>gi|113968732|ref|YP_732525.1| porphobilinogen deaminase [Shewanella sp. MR-4]
gi|114049125|ref|YP_739675.1| porphobilinogen deaminase [Shewanella sp. MR-7]
gi|117918843|ref|YP_868035.1| porphobilinogen deaminase [Shewanella sp. ANA-3]
gi|123131000|sp|Q0HQI7|HEM3_SHESR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123325438|sp|Q0HN99|HEM3_SHESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158512312|sp|A0KS60|HEM3_SHESA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|113883416|gb|ABI37468.1| porphobilinogen deaminase [Shewanella sp. MR-4]
gi|113890567|gb|ABI44618.1| porphobilinogen deaminase [Shewanella sp. MR-7]
gi|117611175|gb|ABK46629.1| porphobilinogen deaminase [Shewanella sp. ANA-3]
Length = 310
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L VH P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERVH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIHGDEMTLRGLVGNPDGSEIIEGVITGPKTEATKLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|206889552|ref|YP_002248559.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741490|gb|ACI20547.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 311
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 175/299 (58%), Gaps = 3/299 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LA+ A + L ++ P + I + T GD+I + L +IGGKGLF +E
Sbjct: 10 IGSRGSKLAMWQANWVKDKLQTLY--PELKVEIEKIKTTGDKILDAPLAKIGGKGLFVKE 67
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+S +D AVHS KD+PT++ +GLQISA RED RD FIS L +L +V+
Sbjct: 68 IEEALLSKRVDLAVHSMKDVPTEIPEGLQISAICEREDPRDAFISKDGVLLNELPQEAVL 127
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR L R+D+ + RG ++TR+ KL + + AI+LA AG+KR+ E ++ +
Sbjct: 128 GTSSLRRTVQLKALRNDLVIKPLRGNVDTRIRKLKDGEFQAIVLAMAGVKRMGVENLVTQ 187
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + P+ GQGAI IET V++ EL+K +NHE+T + ERAFL+ + G C+
Sbjct: 188 AFSEDLMIPAIGQGAIGIETRVDDDFVNELIKPLNHEETAICILAERAFLSVMGGGCQVP 247
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A A ++L G++ +GK+ + R G+ A ++G + A + K +
Sbjct: 248 LACHARIVNNSLKIVGMIGDPEGKMPVIKGFREGSLSQAQSLGVELANELLHRGGKEIL 306
>gi|225175616|ref|ZP_03729610.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1]
gi|225168945|gb|EEG77745.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1]
Length = 314
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 166/294 (56%), Gaps = 5/294 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK +G+R S LAL +T + ++ K P + + + T+GD+I + L++IG K
Sbjct: 2 KKTIVVGSRDSELALT---QTHFVIGELQKHFPDVDFTVKHIKTEGDKILDVALSKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKD 120
GLF +EIE L+S EID AVHS KD+PT + GLQI+ RED RD +I+ ++ L D
Sbjct: 59 GLFVKEIENALLSKEIDFAVHSMKDVPTAVPDGLQITTITEREDPRDCYIAKDGKTRLFD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+VIGTSSLRR A LL RSD ++ RG + TR KL+ H I+LAYAG+ RL
Sbjct: 119 TPQGAVIGTSSLRRSAQLLHQRSDFEIVPIRGNLNTRFRKLSEQDMHGIILAYAGVYRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I EI++ E P+ GQGA+ IET ++ +V +NH+ T ++ ERAFL +L
Sbjct: 179 WADKITEIIDFEKSLPAVGQGALGIETRSDDDFTINIVSALNHDTTASAILAERAFLRQL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+G C+ I + + L G+V DG G+ ++ +G+ AQ
Sbjct: 239 EGGCQVPIGAYGRLEAEELVLDGVVAGLDGSTVLRDQVRGSADESDALGKKLAQ 292
>gi|110835183|ref|YP_694042.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2]
gi|123345297|sp|Q0VM28|HEM3_ALCBS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110648294|emb|CAL17770.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2]
Length = 310
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG
Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLRVELVRIKTQGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +L G + RED RD F+S+T L
Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A + R D+ V RG ++TRL KL+ AI+LA AG+KRL+
Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE + EL+ ++ DTWD V ERA L
Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IAGFA + L+ G+V DG R +G D A+ +
Sbjct: 239 EGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGTAPRGQGAELGIDIAEQL 294
>gi|194334346|ref|YP_002016206.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271]
gi|238058997|sp|B4S922|HEM3_PROA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194312164|gb|ACF46559.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271]
Length = 312
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 167/278 (60%), Gaps = 4/278 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KQQLIIGTRSSPLALWQAEFTKAEL--SKNFPELDIQLKLIKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK L++ EID AVHS KD+PT+ +GL +SA+ RED RDV IS +LK L
Sbjct: 60 LFTKDIEKHLLAKEIDLAVHSLKDVPTETPEGLILSAFTEREDTRDVIISKNGDNLKQLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ I TSSLRR + LL R D + D RG + TR + + + A++LAYAG+ RL
Sbjct: 120 PNAKIATSSLRRTSQLLGIRPDFEMGDIRGNLNTRFKRFDESDFDAMILAYAGVHRLNFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + P+ GQGA+ IET +++ + +++VKV+N++++ ERA L L G
Sbjct: 180 DRISEILPHDVLLPAVGQGALGIETRIDDEQTRQIVKVMNNQNSEYCTKAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSR 278
C+ I +A K TL+ V + DGK I +E+++
Sbjct: 240 GCQIPIGAYATYKNGTLHLSAFVGSVDGKRAIRNEITK 277
>gi|160877198|ref|YP_001556514.1| porphobilinogen deaminase [Shewanella baltica OS195]
gi|189028155|sp|A9L5G0|HEM3_SHEB9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|160862720|gb|ABX51254.1| porphobilinogen deaminase [Shewanella baltica OS195]
gi|315269402|gb|ADT96255.1| porphobilinogen deaminase [Shewanella baltica OS678]
Length = 310
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + DA +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTDATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|39998374|ref|NP_954325.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA]
gi|55976461|sp|Q747I1|HEM3_GEOSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|39985320|gb|AAR36675.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA]
gi|298507314|gb|ADI86037.1| hydroxymethylbilane synthase [Geobacter sulfurreducens KN400]
Length = 318
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 164/284 (57%), Gaps = 3/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GGKGLF
Sbjct: 6 LRIGTRASQLALWQANWVKSELE--KRYPGMEVELVKIKTIGDKILDVPLAQVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS+ + +L +
Sbjct: 64 KEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFISNGV-TFANLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL +K A++LA AG+KRL V+
Sbjct: 123 KIGTSALRRQAQLLKVRPDLEMVIIRGNVETRIRKLTEDKLDAVILAAAGLKRLGFTDVV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L ++ P+ GQGA+ +E +++ +E + NH DT +V ERA L +G C+
Sbjct: 183 TEYLPVDLSLPAIGQGALGLECRLDDQAVRETIDFFNHPDTAHAVRAERALLWRCEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
IA G +L G + + DG + S +G D +G
Sbjct: 243 VPIAAHGQVSGDSLTLTGFIASVDGTRSVKESISGPVTDCEKLG 286
>gi|291285218|ref|YP_003502036.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615]
gi|209753314|gb|ACI74964.1| adenylate cyclase [Escherichia coli]
gi|290765091|gb|ADD59052.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615]
Length = 320
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPHGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|330813348|ref|YP_004357587.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486443|gb|AEA80848.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063]
Length = 321
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 175/296 (59%), Gaps = 2/296 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ IG+R S L+LA + + L+ + + P I + + T GD+ L +GGK
Sbjct: 4 KQKLIIGSRGSRLSLAQSEHFKDELLLANPDLRPDQIELKVIKTSGDKFKTENLASMGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE++L+ IDCAVHS KD+PT + L+++A+L R+D RD FIS A+S + L
Sbjct: 64 GLFVKEIEQELLENNIDCAVHSLKDVPTFGVPSLKLAAFLKRKDERDAFISPVAKSFETL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S +GTSS+RR A L + RSD++++ RG I+TR+ K+ +I+LAYAG+KRL
Sbjct: 124 KPGSTVGTSSVRRIAQLKKLRSDLNIVSMRGNIDTRIEKVKEGIYDSIVLAYAGLKRLGF 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ EIL+ E P+ GQG + I+ N+ + +L+K +N ++T V+ ER+FL ++
Sbjct: 184 HTHVSEILDKEKMLPAAGQGVVTIQCRSNDGELIKLLKSVNDKETEIIVSAERSFLHRVN 243
Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G+C + +A A ++ +L+ DGK R G A++IG D A+ I
Sbjct: 244 GACDTPVAVNAVLNDDGEVFIQAEILSLDGKKVFNAHRTGISEKAVSIGLDVAEEI 299
>gi|157834325|pdb|1YPN|A Chain A, Reduced Form Hydroxymethylbilane Synthase (K59q Mutant)
Crystal Structure After 2 Hours In A Flow Cell
Determined By Time-Resolved Laue Diffraction
Length = 313
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 158/284 (55%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG+GLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGQGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A ++ +V A DG R G DA +G
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMG 287
>gi|220933221|ref|YP_002512120.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|254800261|sp|B8GSU8|HEM3_THISH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219994531|gb|ACL71133.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 316
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 164/292 (56%), Gaps = 3/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ A + + H P + ++ ++T+GDRI + L ++GGKGLF
Sbjct: 6 LRIATRKSPLAVWQAEHVAALVKARH--PGVRVELVGMTTQGDRILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P +L +GL + L RED RD F+S+T +SL +L +
Sbjct: 64 KELETGLLEGRADIAVHSMKDVPMELPEGLCLPVILDREDPRDAFVSNTFKSLDELPRDA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L ++D RG + TRL KL+ + AI+LA AG+KRL E I
Sbjct: 124 RVGTSSLRRQCQLRHDHPHFQILDLRGNVNTRLAKLDAGEFDAIILAAAGLKRLGFEVRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E P+ GQGAI IE N+P+ L+ ++ DT V ERA A L+G C+
Sbjct: 184 ASEITPEQSLPAIGQGAIGIECRENDPEVMALIGSLDDPDTHVRVAAERAMNARLNGGCQ 243
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+A TL G+V DG + +G R +A +GR A +
Sbjct: 244 VPIAGYAELTDADTLRLRGLVGEPDGSLILRAELSGPRAEAEALGRAVADLL 295
>gi|320197614|gb|EFW72226.1| Porphobilinogen deaminase [Escherichia coli WV_060327]
Length = 318
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299
>gi|253775572|ref|YP_003038403.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300930031|ref|ZP_07145463.1| porphobilinogen deaminase [Escherichia coli MS 187-1]
gi|253326616|gb|ACT31218.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300462064|gb|EFK25557.1| porphobilinogen deaminase [Escherichia coli MS 187-1]
Length = 320
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|254163746|ref|YP_003046854.1| porphobilinogen deaminase [Escherichia coli B str. REL606]
gi|242379335|emb|CAQ34146.1| hydroxymethylbilane synthase [Escherichia coli BL21(DE3)]
gi|253975647|gb|ACT41318.1| porphobilinogen deaminase [Escherichia coli B str. REL606]
gi|253979803|gb|ACT45473.1| porphobilinogen deaminase [Escherichia coli BL21(DE3)]
gi|323959059|gb|EGB54728.1| porphobilinogen deaminase [Escherichia coli H489]
gi|323969355|gb|EGB64654.1| porphobilinogen deaminase [Escherichia coli TA007]
Length = 313
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|104784255|ref|YP_610753.1| porphobilinogen deaminase [Pseudomonas entomophila L48]
gi|123380753|sp|Q1I316|HEM3_PSEE4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|95113242|emb|CAK17970.1| porphobilinogen deaminase [Pseudomonas entomophila L48]
Length = 313
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 163/294 (55%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLQVSLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T +SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFKSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLVRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHIDTADRVVAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+G C+ IA +A +G L+ G+V G R A +G A+
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRASAEALGVQVAE 292
>gi|218701284|ref|YP_002408913.1| porphobilinogen deaminase [Escherichia coli IAI39]
gi|226740634|sp|B7NTE0|HEM3_ECO7I RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218371270|emb|CAR19104.1| hydroxymethylbilane synthase [Escherichia coli IAI39]
Length = 313
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294
>gi|120553424|ref|YP_957775.1| porphobilinogen deaminase [Marinobacter aquaeolei VT8]
gi|166217776|sp|A1TXW9|HEM3_MARAV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120323273|gb|ABM17588.1| hydroxymethylbilane synthase [Marinobacter aquaeolei VT8]
Length = 313
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 172/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR S LAL A ++ L +H ++ +I + T+GD+I + L +IGG
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NVDVELIKIKTQGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ + +
Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNQYEHIDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A L R D+ + RG + TRL KL+ + AI+LA +G+KRL
Sbjct: 119 LPEGAVVGTASLRREAQLRANRPDLQIKVLRGNVNTRLAKLDAGEYDAIVLASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L P+ GQGA+ IE V + + EL+ +NH DTWD V+ ERA L
Sbjct: 179 FHDRIRYCLPDTFSLPAVGQGALGIECRVGDTELLELIDPLNHTDTWDRVSAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA +A + +TL+ G+V A DG V R + +GR+ A+ + +
Sbjct: 239 EGGCQVPIAAYALLEDDNTLWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEQLLSM 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|15617181|ref|NP_240394.1| porphobilinogen deaminase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681931|ref|YP_002468317.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682486|ref|YP_002468870.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471641|ref|ZP_05635640.1| porphobilinogen deaminase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11386824|sp|P57651|HEM3_BUCAI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800236|sp|B8D8F3|HEM3_BUCA5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800237|sp|B8D8B0|HEM3_BUCAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|25292183|pir||H84998 hydroxymethylbilane synthase (EC 4.3.1.8) [imported] - Buchnera sp.
(strain APS)
gi|10039246|dbj|BAB13280.1| porphobilinogen deaminase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622219|gb|ACL30375.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624774|gb|ACL30929.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086313|gb|ADP66395.1| porphobilinogen deaminase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086887|gb|ADP66968.1| porphobilinogen deaminase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087477|gb|ADP67557.1| porphobilinogen deaminase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087959|gb|ADP68038.1| porphobilinogen deaminase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 314
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 175/306 (57%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL + ++ ++ P NI ++P+ T GD I N++L++IGG
Sbjct: 1 MYNKTLRIATRKSPLALKQTKYVQKKILSLY--PDLNIKLVPIVTHGDNILNKSLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ + D A+HS KD+P K+ K L + + R + D +S+ QS+
Sbjct: 59 KGLFIKELELALLENKADIAIHSMKDLPVKITKELCLVSICKRGNALDSLVSNNYQSINQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L+ +R D+ + RG IETR+ KL+ K AI+LA G+ RL+
Sbjct: 119 LPKGAIVGTSSLRRQCQLITYRPDLIISPLRGNIETRIAKLDQGKYDAIILATEGLNRLR 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +I+ E PS GQGAI I++ +++ K + +NH +T+ +N ERAF +L
Sbjct: 179 LKNRITQIIPAELSLPSCGQGAIGIQSRLHDKKVLFFLSRLNHINTFIEINAERAFCRKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ C+ I +A K + ++ G+V + +GKI + R G +G A +
Sbjct: 239 ESGCQIPIGSYAILKKNKIWLRGLVGSPNGKIILKGERIGCYNTGEKMGYSLADELLKNG 298
Query: 301 NKNVFN 306
KN+ N
Sbjct: 299 AKNILN 304
>gi|253699058|ref|YP_003020247.1| porphobilinogen deaminase [Geobacter sp. M21]
gi|259647798|sp|C6DYY8|HEM3_GEOSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|251773908|gb|ACT16489.1| porphobilinogen deaminase [Geobacter sp. M21]
Length = 318
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 157/272 (57%), Gaps = 3/272 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELE--KRYPDMTVTLTKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNNVK-FAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE +++N ++ + NH DT +V ERA L
Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNHPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+G C+ IA F G L G + + DGK+
Sbjct: 238 EGGCQVPIAAFGEVTGDELKLTGFIASVDGKV 269
>gi|194438640|ref|ZP_03070728.1| porphobilinogen deaminase [Escherichia coli 101-1]
gi|194422444|gb|EDX38443.1| porphobilinogen deaminase [Escherichia coli 101-1]
Length = 318
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299
>gi|121997816|ref|YP_001002603.1| porphobilinogen deaminase [Halorhodospira halophila SL1]
gi|229836112|sp|A1WVT9|HEM3_HALHL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|121589221|gb|ABM61801.1| hydroxymethylbilane synthase [Halorhodospira halophila SL1]
Length = 310
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 2/290 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A + L +H P + ++P+ST+GD I ++ L IGG
Sbjct: 1 MAAESLRIATRRSQLAMWQAEHIAAELQRLH--PGLEVELVPMSTRGDEILDQPLARIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE D AVHS KD+P +L +G ++A R D RD F+S+ L +
Sbjct: 59 KGLFMKELEDGMLRGEADLAVHSMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR+ ++ R D+ + RG ++TRL KL++ AI+LA +G+ RL+
Sbjct: 119 LPHGARVGTASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLDDGVYDAIILAASGLDRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I L E P+ GQGA+ IE + + +LV+ +NHE T +N ER A L
Sbjct: 179 LTHRIAGRLTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+GSC+ I G+A G ++ G+V A DG G +A N+GR
Sbjct: 239 EGSCQVPIGGYAELDGDEVHLRGLVGAIDGSEVIRGEIRGPAAEAENLGR 288
>gi|184156604|ref|YP_001844943.1| porphobilinogen deaminase [Acinetobacter baumannii ACICU]
gi|332874912|ref|ZP_08442763.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059]
gi|183208198|gb|ACC55596.1| Porphobilinogen deaminase [Acinetobacter baumannii ACICU]
gi|322506491|gb|ADX01945.1| hemC [Acinetobacter baumannii 1656-2]
gi|323516370|gb|ADX90751.1| porphobilinogen deaminase [Acinetobacter baumannii TCDC-AB0715]
gi|332736855|gb|EGJ67831.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059]
Length = 309
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 168/293 (57%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLTLIQPLLHPETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 296
>gi|193076128|gb|ABO10737.2| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978]
Length = 309
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 168/293 (57%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 296
>gi|260556364|ref|ZP_05828583.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606]
gi|260410419|gb|EEX03718.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606]
Length = 314
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 168/293 (57%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 301
>gi|293610070|ref|ZP_06692371.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827302|gb|EFF85666.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 314
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 166/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ +E + L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHAETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 249 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNL 301
>gi|193065671|ref|ZP_03046736.1| porphobilinogen deaminase [Escherichia coli E22]
gi|194429243|ref|ZP_03061771.1| porphobilinogen deaminase [Escherichia coli B171]
gi|192926638|gb|EDV81267.1| porphobilinogen deaminase [Escherichia coli E22]
gi|194412755|gb|EDX29049.1| porphobilinogen deaminase [Escherichia coli B171]
gi|320198489|gb|EFW73090.1| Porphobilinogen deaminase [Escherichia coli EC4100B]
Length = 318
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G +A +G A+ +
Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 299
>gi|323167552|gb|EFZ53258.1| porphobilinogen deaminase [Shigella sonnei 53G]
Length = 313
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G +A +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEEL 294
>gi|237756363|ref|ZP_04584911.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691477|gb|EEP60537.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 310
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 174/294 (59%), Gaps = 8/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L ++H + + ++ ++T+GD+I + L +IGGKGLF
Sbjct: 3 IRIGTRKSQLALWQANYIADRLREIHGV---EVELVKITTQGDKILDVPLAKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S + + L ++
Sbjct: 60 KEIEDALLKNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIKHEHIYQLPENA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + +
Sbjct: 120 VIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDGKV 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C+
Sbjct: 180 KYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGCQ 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFH-----EVSRNGNRCDAINIGRDAAQ 294
+ + K ++ G + +G+ ++ E + + AI +G+ A+
Sbjct: 240 VPLGAYCEIKENSFIITGFIADLEGREYYQEKITEQIKENTQEQAIILGKTLAE 293
>gi|209921277|ref|YP_002295361.1| porphobilinogen deaminase [Escherichia coli SE11]
gi|218556364|ref|YP_002389278.1| porphobilinogen deaminase [Escherichia coli IAI1]
gi|218697519|ref|YP_002405186.1| porphobilinogen deaminase [Escherichia coli 55989]
gi|256021454|ref|ZP_05435319.1| porphobilinogen deaminase [Shigella sp. D9]
gi|260846422|ref|YP_003224200.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str.
12009]
gi|260857792|ref|YP_003231683.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str.
11368]
gi|260870527|ref|YP_003236929.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str.
11128]
gi|293417268|ref|ZP_06659893.1| porphobilinogen deaminase [Escherichia coli B185]
gi|293468119|ref|ZP_06664531.1| porphobilinogen deaminase [Escherichia coli B088]
gi|331670648|ref|ZP_08371485.1| hydroxymethylbilane synthase [Escherichia coli TA271]
gi|226706285|sp|B6I4E0|HEM3_ECOSE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740635|sp|B7M603|HEM3_ECO8A RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800249|sp|B7L959|HEM3_ECO55 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|209914536|dbj|BAG79610.1| porphobilinogen deaminase [Escherichia coli SE11]
gi|218354251|emb|CAV00923.1| hydroxymethylbilane synthase [Escherichia coli 55989]
gi|218363133|emb|CAR00774.1| hydroxymethylbilane synthase [Escherichia coli IAI1]
gi|257756441|dbj|BAI27943.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str.
11368]
gi|257761569|dbj|BAI33066.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str.
12009]
gi|257766883|dbj|BAI38378.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str.
11128]
gi|291321497|gb|EFE60935.1| porphobilinogen deaminase [Escherichia coli B088]
gi|291431036|gb|EFF04031.1| porphobilinogen deaminase [Escherichia coli B185]
gi|323155206|gb|EFZ41390.1| porphobilinogen deaminase [Escherichia coli EPECa14]
gi|323182576|gb|EFZ67980.1| porphobilinogen deaminase [Escherichia coli 1357]
gi|323380839|gb|ADX53107.1| porphobilinogen deaminase [Escherichia coli KO11]
gi|323943796|gb|EGB39891.1| porphobilinogen deaminase [Escherichia coli H120]
gi|324115735|gb|EGC09670.1| porphobilinogen deaminase [Escherichia coli E1167]
gi|331062121|gb|EGI34043.1| hydroxymethylbilane synthase [Escherichia coli TA271]
Length = 313
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G +A +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 294
>gi|74314316|ref|YP_312735.1| porphobilinogen deaminase [Shigella sonnei Ss046]
gi|73857793|gb|AAZ90500.1| porphobilinogen deaminase [Shigella sonnei Ss046]
Length = 320
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G +A +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEEL 301
>gi|157156845|ref|YP_001465286.1| porphobilinogen deaminase [Escherichia coli E24377A]
gi|300818726|ref|ZP_07098933.1| porphobilinogen deaminase [Escherichia coli MS 107-1]
gi|300823336|ref|ZP_07103467.1| porphobilinogen deaminase [Escherichia coli MS 119-7]
gi|300921486|ref|ZP_07137834.1| porphobilinogen deaminase [Escherichia coli MS 115-1]
gi|300923304|ref|ZP_07139352.1| porphobilinogen deaminase [Escherichia coli MS 182-1]
gi|301328438|ref|ZP_07221519.1| porphobilinogen deaminase [Escherichia coli MS 78-1]
gi|307313621|ref|ZP_07593241.1| porphobilinogen deaminase [Escherichia coli W]
gi|331679912|ref|ZP_08380575.1| hydroxymethylbilane synthase [Escherichia coli H591]
gi|332282690|ref|ZP_08395103.1| porphobilinogen deaminase [Shigella sp. D9]
gi|157078875|gb|ABV18583.1| porphobilinogen deaminase [Escherichia coli E24377A]
gi|300411603|gb|EFJ94913.1| porphobilinogen deaminase [Escherichia coli MS 115-1]
gi|300420390|gb|EFK03701.1| porphobilinogen deaminase [Escherichia coli MS 182-1]
gi|300524122|gb|EFK45191.1| porphobilinogen deaminase [Escherichia coli MS 119-7]
gi|300528692|gb|EFK49754.1| porphobilinogen deaminase [Escherichia coli MS 107-1]
gi|300845148|gb|EFK72908.1| porphobilinogen deaminase [Escherichia coli MS 78-1]
gi|306906602|gb|EFN37114.1| porphobilinogen deaminase [Escherichia coli W]
gi|315063097|gb|ADT77424.1| hydroxymethylbilane synthase [Escherichia coli W]
gi|324016226|gb|EGB85445.1| porphobilinogen deaminase [Escherichia coli MS 117-3]
gi|331072459|gb|EGI43791.1| hydroxymethylbilane synthase [Escherichia coli H591]
gi|332105042|gb|EGJ08388.1| porphobilinogen deaminase [Shigella sp. D9]
Length = 320
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G +A +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 301
>gi|238918086|ref|YP_002931600.1| porphobilinogen deaminase, [Edwardsiella ictaluri 93-146]
gi|238867654|gb|ACR67365.1| porphobilinogen deaminase, putative [Edwardsiella ictaluri 93-146]
Length = 317
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 154/284 (54%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A R L+ + P I ++P+ T+GD + + L ++GGKGLF
Sbjct: 12 LRIATRQSPLALWQAHYVRDQLL--AQWPQLTIELVPMVTRGDVLLDTPLAKVGGKGLFV 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L S
Sbjct: 70 KELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQLPPGS 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ E I
Sbjct: 130 VVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQLEDRI 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE + + + L+ +NH +T V ERA L+G C+
Sbjct: 190 RTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHAETALRVCAERAMNTRLEGGCQ 249
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A G L+ +V A DG + R G A +G
Sbjct: 250 VPIGSYAEIDGDRLWLRALVGAPDGSLMICGERRGPLAQAEAMG 293
>gi|204930376|ref|ZP_03221353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320780|gb|EDZ05982.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 320
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 157/291 (53%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S
Sbjct: 71 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERHPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+
Sbjct: 191 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 251 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 301
>gi|253991598|ref|YP_003042954.1| porphobilinogen deaminase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783048|emb|CAQ86213.1| porphobilinogen deaminase [Photorhabdus asymbiotica]
Length = 313
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 159/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L + P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQFY--PDLEVQLVPMVTQGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSAKYHSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+++ D RG + TRL+KL+N AI+LA AG+KRL+
Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLTIRDLRGNVGTRLSKLDNGHYDAIILAVAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L+ + P+ GQGA+ IE +++ + + L+ +NH DT V ER L
Sbjct: 179 LHDRIRTPLSAKQLLPAVGQGAVGIECRLDDQQTRALLAPLNHYDTEICVLAERTMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A + ++ +V A DG + R DA G
Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTVLPKDACQAG 287
>gi|331005642|ref|ZP_08329011.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989]
gi|330420567|gb|EGG94864.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989]
Length = 324
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 165/296 (55%), Gaps = 4/296 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR SPLAL A ++ L +H P + ++P++++GD I + L ++GGKG
Sbjct: 13 KNTITIATRKSPLALWQAEYVKARLEALH--PEVTVELLPMTSRGDHILDVPLAKVGGKG 70
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L++GE D AVHS KD+P + +GL +S RED RD F+S S DL
Sbjct: 71 LFVKELEHALLNGEADIAVHSMKDVPMEFPEGLGLSVICEREDPRDAFVSEKYASFADLP 130
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ LL R D+ + RG + TRL KL+ + AI+LA AG+ RLK
Sbjct: 131 QGAVVGTSSLRRQCQLLEQRPDLQITFLRGNVNTRLRKLDEGEYDAIILAAAGLMRLKMA 190
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L E P+ GQGA+ IE ++ + + + +N T + V ERA L+G
Sbjct: 191 DRITEYLTPELCLPAGGQGAVGIECRDDDEQVKTWLAPLNDPITHECVAAERAMNRRLEG 250
Query: 243 SCKSAIAGFAY--CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IA +A G L+ G+V + DGKI E G A ++G A+ +
Sbjct: 251 GCQVPIASYAIHSADGKQLWLRGLVGSPDGKIMLEDEVTGAPDQADDLGVKLAERL 306
>gi|170724850|ref|YP_001758876.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908]
gi|238059003|sp|B1KQC6|HEM3_SHEWM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169810197|gb|ACA84781.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908]
Length = 309
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PDLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPKGAVVGTSSLRRQCQIRAARPDLQIRDLRGNVGTRLGKLDAGTYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHAETRFRVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A TL G+V DG ++ G + DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIVDDTLTLRGLVGNPDGTQIIASTKVGPKTDAKALGISLAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|283834568|ref|ZP_06354309.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220]
gi|291069698|gb|EFE07807.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220]
Length = 313
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + GL + RED RD F+S+ +L DL S
Sbjct: 64 KELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDDLPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+KRL E +
Sbjct: 124 IVGTSSLRRQCQLAKRRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRV 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + + L+ +NHE+T V ERA L+G C+
Sbjct: 184 RTALPPEVSLPAVGQGAVGIECRLDDMRTRALLAPLNHEETALRVKAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELINGEIWLRALVGAPDGSQMVCGERRGAVQDAEQMGISLAEEL 294
>gi|323161134|gb|EFZ47052.1| porphobilinogen deaminase [Escherichia coli E128010]
Length = 313
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTHELLAALNHHETALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G +A +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 294
>gi|152978040|ref|YP_001343669.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z]
gi|189042873|sp|A6VL87|HEM3_ACTSZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150839763|gb|ABR73734.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z]
Length = 309
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 160/270 (59%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+++ +I TR SPLAL A + L +++ P + ++P+ TKGD I + L +IGG
Sbjct: 1 MQQEILKIATRQSPLALWQANFVKDRLTEIY--PDLTVELVPMVTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++G+ D AVHS KD+P + GL +S RED RD F+S+ ++L D
Sbjct: 59 KGLFVKELENALLNGDADIAVHSMKDVPMEFPAGLGLSVICKREDPRDAFVSNRYRTLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+++ RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 119 LPPGAIVGTSSLRRQCQLKKRRPDLNIRSLRGNVGTRLSKLDQGDYDAIILASAGLIRLA 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + E P+ GQGA+ IE +N+ + Q+L+ + +T V ERA L
Sbjct: 179 LPERIASFIETEISLPAAGQGAVGIECRINDQRVQKLLAPLADTETTACVLAERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I G+A G+ L+ +V A DG
Sbjct: 239 QGGCQVPIGGYAVLNGNELHLRALVGALDG 268
>gi|311105076|ref|YP_003977929.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8]
gi|310759765|gb|ADP15214.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8]
Length = 315
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 167/299 (55%), Gaps = 2/299 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF +E
Sbjct: 9 IATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P L ++ A L R D RD F+S+T +L DL +V+
Sbjct: 67 LENALLDGRADLAVHSLKDVPVDLQAPFELCAVLDRADPRDAFVSNTHDTLADLPAGAVV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ + ++ V RG ++TRL KL+ + AI+LA AG++RL I+
Sbjct: 127 GTSSLRRESQIRARYPELVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLERLGLGARIRS 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L ED P+ GQGA+ IE + + + + DT V ERA +L GSC+
Sbjct: 187 LLEPEDSLPAAGQGALGIEIRDDRDDMRAWLAPLVSADTTSCVVAERAVSRKLGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+A +A G TL +V + DG SR+G DA IG AAQ + +++
Sbjct: 247 LAAYAEIAGGTLSLRALVASPDGVRMVHASRSGPVADAQAIGEAAAQALLDAGAQDILR 305
>gi|163782608|ref|ZP_02177605.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882181|gb|EDP75688.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 303
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 164/290 (56%), Gaps = 5/290 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RIGTR S LAL A +S L K + ++ ++T GD+I + L +IGGKGLF +
Sbjct: 4 RIGTRKSKLALWQANFVKSFL---EKKWGVEVELVKITTTGDKILDSPLAKIGGKGLFVK 60
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L+ G ID AVHS KD+P + +GL + A RE+ DV +S L +L +
Sbjct: 61 EIEQALMEGRIDLAVHSLKDVPMVIPEGLTLGAITEREEPHDVLLSRDGGKLLELREGAK 120
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+ L R R D+ V RG ++TR+ KL AI+LAYAG+KR+ E +
Sbjct: 121 VGTSSLRRQVQLKRLRRDLEVEVLRGNVDTRVRKLKEGMYDAIILAYAGVKRMGYEDEVT 180
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L+ F P+ GQG++ IE + + L++ +NH ++ CERAFL L+G C+
Sbjct: 181 EVLDY--FIPAVGQGSLAIEIREGDEETLRLIEPLNHPESRVRAECERAFLRRLEGGCQV 238
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I FA KG+TL G + +G F E G +A +G A+ +
Sbjct: 239 PIGAFAQVKGNTLTVRGFISDLEGLKFIEGEEVGKPEEASELGERLAESL 288
>gi|300721444|ref|YP_003710719.1| hydroxymethylbilane synthase [Xenorhabdus nematophila ATCC 19061]
gi|297627936|emb|CBJ88482.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus nematophila ATCC 19061]
Length = 313
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 161/293 (54%), Gaps = 6/293 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MTMKTIRIATRQSPLAMWQAHYVQKQLQHFH--PELKVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + R+D RD F+S SL D
Sbjct: 59 KGLFVKELELALLEKRADIAVHSMKDVPVEFPNGLGLVTICERDDPRDAFVSVKYASLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + R D+ + D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPTGSVVGTSSLRRQCQLRQLRPDLVIRDLRGNVGTRLSKLDNGDYDAIILATAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L
Sbjct: 179 LEERIRMPLAPELLLPAVGQGAVGIECRLDDQQTRELLAPLNHARTEICVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+G C+ I +A + ++ +V A DG VS G R + R A
Sbjct: 239 EGGCQVPIGSYAIWQEDKIWLRALVGAPDGT----VSVRGERVVSPEEARQAG 287
>gi|295706769|ref|YP_003599844.1| porphobilinogen deaminase [Bacillus megaterium DSM 319]
gi|294804428|gb|ADF41494.1| porphobilinogen deaminase [Bacillus megaterium DSM 319]
Length = 310
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 168/292 (57%), Gaps = 8/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LAL +T+ + + K P I + TKGD+I N TL+++GGKGLF +
Sbjct: 6 VGSRRSKLALT---QTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L +V
Sbjct: 63 EIEQAMLDEEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VI 185
IGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ + +
Sbjct: 123 IGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNKDYDAIILAAAGLSRMGWSRDTV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G C+
Sbjct: 183 TQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGCQ 242
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+ G + +V + DGK ++ G D + IG AA+ +
Sbjct: 243 VPIAGYGRILDGGNIELTSLVASPDGKTIYKEQITGK--DPVAIGSAAAERL 292
>gi|290477117|ref|YP_003470030.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus bovienii SS-2004]
gi|289176463|emb|CBJ83272.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus bovienii SS-2004]
Length = 311
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 154/269 (57%), Gaps = 2/269 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR SPLA+ A + L H P + +IP+ T+GD I + L ++GGKGL
Sbjct: 2 KIIRIATRQSPLAMWQAQYVQKQLEQFH--PELKVELIPMVTRGDVILDTPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + GL + R D RD F+S SL +L +
Sbjct: 60 FVKELELALLENRADIAVHSMKDVPVEFPDGLGLVTICERGDPRDAFVSVKYTSLDELPI 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL E
Sbjct: 120 GSIVGTSSLRRQCQLRQLRPDLVVRDLRGNVGTRLGKLDNGDYDAIILAAAGLKRLGLED 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G
Sbjct: 180 RIRMPLEPELLLPAVGQGAVGIECRLDDKQTRELLAPLNHTGTEICVLAERAMNTHLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
C+ I +A +G+ ++ +V A DG I
Sbjct: 240 CQVPIGSYAIWQGNNIWLRALVGAPDGSI 268
>gi|326388534|ref|ZP_08210128.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM
19370]
gi|326206999|gb|EGD57822.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM
19370]
Length = 309
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 151/266 (56%), Gaps = 4/266 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLA+A A ETR+ L H P + ++P+ GDRI +R L EIGGK L+T
Sbjct: 1 MRLGTRQSPLAMAQAEETRARLCAAHGWPVDAVELVPVVASGDRIQDRPLAEIGGKALWT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ L G ID AVHS KD+ T + L I+A LPR D+RDV + A S+ D+ +
Sbjct: 61 KELDAWLAEGTIDAAVHSMKDVETLRPETLTIAAVLPRADVRDVLVG--AASVADIPTGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL E I
Sbjct: 119 RVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLGKLERGEADVTLLAAAGLVRL-GETGI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ E + P+P QGAI IE L I+ T ++ ERA L L G+C
Sbjct: 178 GTPLDAETWLPAPAQGAIGIECLAARADLLSLFAAIDDAPTHAAIRAERALLTGLGGTCH 237
Query: 246 SAIAGFAYCKGST-LYFYGIVLASDG 270
S IA +G T L+ + + DG
Sbjct: 238 SPIAVLTRPEGDTELFLRAALFSPDG 263
>gi|294501421|ref|YP_003565121.1| porphobilinogen deaminase [Bacillus megaterium QM B1551]
gi|294351358|gb|ADE71687.1| porphobilinogen deaminase [Bacillus megaterium QM B1551]
Length = 310
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 169/292 (57%), Gaps = 8/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LAL +T+ + + K P I + TKGD+I N TL+++GGKGLF +
Sbjct: 6 VGSRRSKLALT---QTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L +V
Sbjct: 63 EIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VI 185
IGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ K +
Sbjct: 123 IGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G C+
Sbjct: 183 TQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGCQ 242
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+ G + +V + DGK ++ G + + IG +AA+ +
Sbjct: 243 VPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--NPVAIGSEAAERL 292
>gi|291288798|ref|YP_003505614.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809]
gi|290885958|gb|ADD69658.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809]
Length = 308
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 168/300 (56%), Gaps = 5/300 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I TR S LAL A+ TR L H + NI+ TKGD+I + L +IGGKGLF +
Sbjct: 6 IATRGSNLALWQAYYTRDRLQKEHGVEVELNII----KTKGDKILDVPLAKIGGKGLFVK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ LI G+ D AVHS KD+P ++ +GL++ A D F+S + +L +V
Sbjct: 62 EIEQALIDGKADIAVHSMKDVPMEMPEGLELYASPEGASPYDCFVSVKYNEVVELPQGAV 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRRK LL+ R D+ + D RG + TRL KL + I+LA AG+ RL+ VIK
Sbjct: 122 VGTSSLRRKLQLLKMRPDLVIKDLRGNVNTRLAKLEAGEFDGIVLAKAGLVRLELGHVIK 181
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E + P+ QGA+ + N+ + +EL++ + T V+ ERAFL L+G C++
Sbjct: 182 ETFTADQMLPACCQGALGFQIRANDTRMKELLRFMKDPATETKVSMERAFLRRLEGGCQA 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IAG + GS + GIV A DG+ F E G+ DA +G + A+ + K++
Sbjct: 242 PIAGHSVLTGSKICMKGIVAALDGRTFIEQFIEGHAEDAEKLGLELAERVLNAGAKDILE 301
>gi|217975048|ref|YP_002359799.1| porphobilinogen deaminase [Shewanella baltica OS223]
gi|304412540|ref|ZP_07394146.1| porphobilinogen deaminase [Shewanella baltica OS183]
gi|307307199|ref|ZP_07586937.1| porphobilinogen deaminase [Shewanella baltica BA175]
gi|254800258|sp|B8E879|HEM3_SHEB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|217500183|gb|ACK48376.1| porphobilinogen deaminase [Shewanella baltica OS223]
gi|304349182|gb|EFM13594.1| porphobilinogen deaminase [Shewanella baltica OS183]
gi|306910438|gb|EFN40869.1| porphobilinogen deaminase [Shewanella baltica BA175]
Length = 310
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|254418576|ref|ZP_05032300.1| porphobilinogen deaminase [Brevundimonas sp. BAL3]
gi|196184753|gb|EDX79729.1| porphobilinogen deaminase [Brevundimonas sp. BAL3]
Length = 317
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 158/270 (58%), Gaps = 5/270 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI-VIIPLS---TKGDRITNRTLTEIGG 60
P RIGTR S LALA + + ++ + I +PL T GDRI +R L E+GG
Sbjct: 4 PLRIGTRRSKLALAQSGMMQRAIGRALGVAEAEIEAAVPLVEIVTTGDRIQDRRLMEMGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LFT+EIE+ L+ ID A+HS KD+P + +GL I+A RED RD FIS S
Sbjct: 64 KALFTKEIEEALLDRRIDIAIHSMKDVPAEQPEGLCIAAIPEREDARDAFISRDFDSFDQ 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR+A L R D+ V RG I+TRL + AILLA +G+ RL
Sbjct: 124 LPFGARLGTASLRRQAQALALRPDLKVEMLRGNIDTRLRRAAEGDFDAILLAVSGMTRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+E L+++ F P+PGQGA+ I+T ++ A V +NH +T +V ER + L
Sbjct: 184 VTEHIREKLSLDAFLPAPGQGALAIQTRADDIDAP-WVAALNHPETAVAVAAERGAMTAL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+GSC++A+ +A +G TL +L+ DG
Sbjct: 243 EGSCRTAVGAYALIEGDTLRLTTEMLSPDG 272
>gi|328952141|ref|YP_004369475.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109]
gi|328452465|gb|AEB08294.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109]
Length = 311
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 152/263 (57%), Gaps = 2/263 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LALA A + + + P + + + T GD+I + L +IGGKG
Sbjct: 2 KNHLRIGTRGSALALAQAAWVQQQIQ--GRYPQITVDLEIIKTTGDKIQDVALAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE ++SGE+D VHS KD+PT++ GL I RED RD FIS +SL ++
Sbjct: 60 LFTKEIEMAILSGEVDLGVHSMKDVPTEIPLGLVIGITTVREDPRDAFISRKYRSLAEIP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L IGT SLRR+A LL R D+ ++ RG ++TRL KL AI+LA AG+ RL +
Sbjct: 120 LGGRIGTGSLRRRAQLLHLRPDLEIVPLRGNVDTRLRKLTEADLDAIILAAAGLHRLGRA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I IL P+ GQGA+ +E ++ EL++ ++ +T +V ERAFLA L+G
Sbjct: 180 AEITAILPETQMLPAIGQGALGLEYRQDDAVTMELLEFLDDPETRVAVAAERAFLARLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIV 265
C+ IA K L+ G++
Sbjct: 240 GCQVPIAAMGTLKKGELFLDGLI 262
>gi|255320960|ref|ZP_05362133.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82]
gi|262379948|ref|ZP_06073103.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164]
gi|255301924|gb|EET81168.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82]
gi|262298142|gb|EEY86056.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164]
Length = 307
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 165/291 (56%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGLF
Sbjct: 5 LKIATRKSPLALWQAEHIRACLQELH--PGLTVELVTFVTQGDKILDTPLAKIGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P L GL + RED D F+S+ + + L +
Sbjct: 63 KELEAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRK +L+ R D++++D RG + TRL+KL+ + AI+LA AG+KRL + I
Sbjct: 123 TVGTSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSERI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K L+ E P+ GQGA+ +E ++ +L+ + HE T V ERAF + L+G C+
Sbjct: 183 KHTLSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IA +A + L G V + DG I +G A +G + A+ +
Sbjct: 243 VPIAAYATLENGQLQLEGRVGSVDGLILLSSQVSGQPEHAEQLGIELAENL 293
>gi|123440582|ref|YP_001004576.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332159812|ref|YP_004296389.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|158512667|sp|A1JI86|HEM3_YERE8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|122087543|emb|CAL10324.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607646|emb|CBY29144.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664042|gb|ADZ40686.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862558|emb|CBX72712.1| porphobilinogen deaminase [Yersinia enterocolitica W22703]
Length = 313
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 162/293 (55%), Gaps = 2/293 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDNFTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+G C+ I +A G TL+ +V A DG R G +A +G + A
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELA 291
>gi|191166073|ref|ZP_03027908.1| porphobilinogen deaminase [Escherichia coli B7A]
gi|190903849|gb|EDV63563.1| porphobilinogen deaminase [Escherichia coli B7A]
Length = 313
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G +A +G A+ +
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 294
>gi|325272336|ref|ZP_08138739.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51]
gi|324102530|gb|EGB99973.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51]
Length = 313
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PELRVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNHFASLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITATISVDDSLPAGGQGAVGIECRSADHAIHALLAPLHHHDTADRVVAERAMNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G L+ G+V G R A +G + A+++
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRATAEALGVEVAEHL 294
>gi|309796256|ref|ZP_07690666.1| porphobilinogen deaminase [Escherichia coli MS 145-7]
gi|308120138|gb|EFO57400.1| porphobilinogen deaminase [Escherichia coli MS 145-7]
Length = 320
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G C+
Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G +A +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 301
>gi|126176187|ref|YP_001052336.1| porphobilinogen deaminase [Shewanella baltica OS155]
gi|153002481|ref|YP_001368162.1| porphobilinogen deaminase [Shewanella baltica OS185]
gi|166217785|sp|A3D9Q4|HEM3_SHEB5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217786|sp|A6WTG0|HEM3_SHEB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125999392|gb|ABN63467.1| porphobilinogen deaminase [Shewanella baltica OS155]
gi|151367099|gb|ABS10099.1| porphobilinogen deaminase [Shewanella baltica OS185]
Length = 310
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|59710673|ref|YP_203449.1| porphobilinogen deaminase [Vibrio fischeri ES114]
gi|197333951|ref|YP_002154835.1| porphobilinogen deaminase [Vibrio fischeri MJ11]
gi|75431912|sp|Q5E8T5|HEM3_VIBF1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706298|sp|B5FF97|HEM3_VIBFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|59478774|gb|AAW84561.1| hydroxymethylbilane synthase [Vibrio fischeri ES114]
gi|197315441|gb|ACH64888.1| porphobilinogen deaminase [Vibrio fischeri MJ11]
Length = 311
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 165/295 (55%), Gaps = 2/295 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L R D+ + + RG + TRL KL++ AI+LA AG+ RL
Sbjct: 121 PQGAVVGTCSLRRQCQLKEARPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK + E P+ GQGA+ IE +++ + + L++ +NH +T + V CERA L+
Sbjct: 181 EDRIKSAIEPEQSLPAVGQGAVGIEARLDDDRLRALLEPLNHPETANRVLCERAMNNRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I ++ G ++ +V DG + +G DA +G A +
Sbjct: 241 GGCQVPIGSYSLIDGDQIWLRALVGEPDGSVMIRGEVSGPVSDAEALGTQLADQL 295
>gi|262040885|ref|ZP_06014111.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041774|gb|EEW42819.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 318
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + + L + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPECLGLVTICERDDPRDAFVSNRYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A K L+ +V A DG R G A +G
Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALG 292
>gi|157144433|ref|YP_001451752.1| porphobilinogen deaminase [Citrobacter koseri ATCC BAA-895]
gi|157081638|gb|ABV11316.1| hypothetical protein CKO_00147 [Citrobacter koseri ATCC BAA-895]
Length = 318
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +L+ H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKDALIAQH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L +L S
Sbjct: 69 KELEVALLEKRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNQYNNLDELPAGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL I
Sbjct: 129 IVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLTSRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L+G C+
Sbjct: 189 RTALPPEISLPAVGQGAVGIECRLDDARTQALLAPLNHEETALRVKAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAEIIDGEVWLRALVGAPDGSQMIRGERRGLPQDAAQMGISLAEEL 299
>gi|215484908|ref|YP_002327147.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294]
gi|301346814|ref|ZP_07227555.1| porphobilinogen deaminase [Acinetobacter baumannii AB056]
gi|301512648|ref|ZP_07237885.1| porphobilinogen deaminase [Acinetobacter baumannii AB058]
gi|301595532|ref|ZP_07240540.1| porphobilinogen deaminase [Acinetobacter baumannii AB059]
gi|332851472|ref|ZP_08433469.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150]
gi|332866846|ref|ZP_08437233.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113]
gi|213987600|gb|ACJ57899.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294]
gi|332729925|gb|EGJ61256.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150]
gi|332734374|gb|EGJ65495.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113]
Length = 309
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 296
>gi|169797472|ref|YP_001715265.1| porphobilinogen deaminase [Acinetobacter baumannii AYE]
gi|213155714|ref|YP_002317759.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057]
gi|169150399|emb|CAM88296.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
baumannii AYE]
gi|213054874|gb|ACJ39776.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057]
Length = 314
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 301
>gi|194469126|ref|ZP_03075110.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205358767|ref|ZP_02658924.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194455490|gb|EDX44329.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332052|gb|EDZ18816.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 313
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 157/291 (53%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P GL + RED RD F+S+ SL L S
Sbjct: 64 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDVLPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+
Sbjct: 184 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 244 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 294
>gi|254455286|ref|ZP_05068715.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082288|gb|EDZ59714.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211]
Length = 305
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 177/300 (59%), Gaps = 4/300 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IG+R S LAL +A + + ++ I +I+I ++TKGD++ + L+E+GGKGL
Sbjct: 3 KKITIGSRGSKLALIYAQKAKDKIIQNTNIKDEDIIIKEITTKGDQVQDMRLSEVGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F+ IEK+L +ID AVH+ KDMP GL+ + +L R D R++ I+ + + L +L +
Sbjct: 63 FSTNIEKELQDKKIDIAVHALKDMPAIETVGLRTNTFLKRNDPREILIAQSGKKLNELKI 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+S+IGTSS RR+ + + RSDI+ RG ++TR+ KLN+ AI+L+YAGIK L+ E
Sbjct: 123 NSIIGTSSYRREFQIKKIRSDINCKLIRGNVDTRIKKLNDGLYDAIILSYAGIKSLEIED 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EI +IE+ PS GQG I ++ N+ + ++ IN ++T + ER L L+G
Sbjct: 183 KITEIFSIEEIIPSAGQGIIALQCRNNDIEIISVLDEINDKETSSMAHAERNVLKVLEGD 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C++AI A + + + + DGK F + S N DA +G++ + ++ SN
Sbjct: 243 CETAIGTHAIIEEDKIILQAELFSLDGKQRFFEKKSSKIN--DARELGKELGEILKTKSN 300
>gi|238793582|ref|ZP_04637206.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909]
gi|238727172|gb|EEQ18702.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909]
Length = 313
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S + D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICERDDPRDAFVSPHFAHIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LASRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRVTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A +G+TL+ G+V A DG R G +A +G
Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRGLVGAPDGSEIIRGERRGPAENAEQMG 287
>gi|77461708|ref|YP_351215.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1]
gi|123602840|sp|Q3K4T0|HEM3_PSEPF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77385711|gb|ABA77224.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1]
Length = 313
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 160/275 (58%), Gaps = 3/275 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEAAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTADRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274
+G C+ IA +A +G L+ G+V S GK+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGEPSGGKLLN 273
>gi|167031229|ref|YP_001666460.1| porphobilinogen deaminase [Pseudomonas putida GB-1]
gi|189028150|sp|B0KH05|HEM3_PSEPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166857717|gb|ABY96124.1| porphobilinogen deaminase [Pseudomonas putida GB-1]
Length = 313
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHADTADRVVAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+G C+ IA +A +G L+ G+V G R A +G A+
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRTAAETLGVQVAE 292
>gi|322421444|ref|YP_004200667.1| porphobilinogen deaminase [Geobacter sp. M18]
gi|320127831|gb|ADW15391.1| porphobilinogen deaminase [Geobacter sp. M18]
Length = 318
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 5/290 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELE--KRYPDMTVTLKKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVK-FAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLETEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE ++N + ++ + NH DT +V ERA L
Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECSLSNEEVKDAISFFNHPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNGNRCDAINI 288
+G C+ IA + G L G + + DGK+ + V+ + C+ + +
Sbjct: 238 EGGCQVPIAAYGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADECEKLGV 287
>gi|183600277|ref|ZP_02961770.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827]
gi|188020068|gb|EDU58108.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827]
Length = 314
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 155/265 (58%), Gaps = 2/265 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A+ + L H P + ++P+ TKGD I + L ++GGKGLF
Sbjct: 7 VRIATRKSPLALWQAYFVKEKLEQFH--PGLQVELVPMVTKGDIILDTPLAKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 65 KELELALLEKRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYDSLDALPAGS 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 125 VVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEARI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + ++L++ +N ++T V ERA L+G C+
Sbjct: 185 RTALAPEQSLPAVGQGAVGIECRLDDERTRQLLEKLNDDNTSVCVLAERAMNMRLEGGCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I +A + ++ +V A DG
Sbjct: 245 VPIGSYAIWQDGQIWLRALVGAPDG 269
>gi|163797975|ref|ZP_02191917.1| Porphobilinogen deaminase [alpha proteobacterium BAL199]
gi|159176769|gb|EDP61340.1| Porphobilinogen deaminase [alpha proteobacterium BAL199]
Length = 321
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 159/303 (52%), Gaps = 5/303 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R SPLAL E R L I + + T GD + +R L EIGGKGLF +E
Sbjct: 17 LGSRGSPLALRQTHEVRDRLAAAWPELAGAIAVQEIRTTGDAVRDRPLAEIGGKGLFIKE 76
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L++G+ID AVHS KDM T + + A LPRED RD ++S A + DL + I
Sbjct: 77 IEQALMAGQIDAAVHSMKDMETTIAPASVLVAVLPREDPRDAWLSPIADRVDDLPSGAKI 136
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+S+RR A +L R D+ V+ FRG ++TRL KL + LA AG+ RL
Sbjct: 137 GTASVRRAAQVLNRRPDLQVVLFRGNVDTRLRKLAEGEVAGTFLAAAGLSRLGMLDKATR 196
Query: 188 ILNIEDFPPSPGQGAICI-----ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
IL +++ P+ QGAI + E + + + + +++ + V ERA LA LDG
Sbjct: 197 ILEVDEMLPAVSQGAIGVQCRDGEASARDAEIRNWLSILDDRPSRLRVTAERAMLATLDG 256
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G+ L G+V + DG+ H D +GR + I +
Sbjct: 257 SCRTPIAGHATLGGARLTLSGMVFSLDGQSSHGAVDTSATDDPEALGRTVGEAILARGGR 316
Query: 303 NVF 305
N
Sbjct: 317 NFL 319
>gi|148655885|ref|YP_001276090.1| porphobilinogen deaminase [Roseiflexus sp. RS-1]
gi|166217784|sp|A5UU37|HEM3_ROSS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148567995|gb|ABQ90140.1| hydroxymethylbilane synthase [Roseiflexus sp. RS-1]
Length = 303
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 161/287 (56%), Gaps = 3/287 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IGTR S LAL + R +L H P + + ++T+GD I +R L IG KG
Sbjct: 2 KQTLIIGTRASKLALVQTYMVRDALQSAH--PGLTVAVEHITTRGDIILDRPLNAIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF EIE+ + +G ID AVHSAKD+P+ L + ++A R D RD ++ +L L
Sbjct: 60 LFVVEIEEAMRAGRIDLAVHSAKDLPSVLPPDMTLAACPRRADPRDALVAQPGMTLAALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL +
Sbjct: 120 SGARVGTSSLRRACQLRALRPDLTLVDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E++ + P+ GQG I +E ++ + L+ ++ + ++ ERAFLA + G
Sbjct: 180 GAISELIEPDVLIPAVGQGVIGVEARADDEEVLRLLAPLDDQAARIAITAERAFLARIGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C+ + A+ +G L G++ A DG++ + R G+ D + +G
Sbjct: 240 GCQVPVGALAHLEGDELLLRGMIGARDGRMVRGMQR-GSASDPVGLG 285
>gi|325690356|gb|EGD32360.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK115]
Length = 306
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 172/310 (55%), Gaps = 16/310 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVEQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ + +L+I+ P+ QGA+ +E + + ++L+ + E T V ERA L
Sbjct: 178 WLDQSLLHIQPLETRLCLPAISQGALAVEYREEDEELRKLLATVQDEKTAAEVAVERAVL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A+++ C IA A KG ++ DG+ VS G + A Q +R
Sbjct: 238 AQMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVR 291
Query: 298 FISNKNVFNF 307
+++K
Sbjct: 292 QLADKGAVGM 301
>gi|121535332|ref|ZP_01667145.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1]
gi|121306118|gb|EAX47047.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1]
Length = 317
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 167/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LAL A L H P + I + T GD+I + L +IGGKG
Sbjct: 2 KNKLVIGTRGSKLALWQANYIAHRLCQYH--PGLEVTIKHIVTTGDKILDVPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+EIE ++ GEID AVHS KDMPT+L GL ++A RE+ D IS +L L
Sbjct: 60 VFTKEIELAMLRGEIDLAVHSLKDMPTELPPGLTLAAITEREEPFDALISPKYGTLDKLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A LL R D++V D RG ++TRL KL + AI+LA AG+KRL +
Sbjct: 120 HGAKVGTSSLRRRAQLLNCRPDLTVCDLRGNVDTRLRKLETEELDAIVLAQAGLKRLGWD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + L + P+ GQGA+ +ET ++ + LV ++ EDT +V ER+FL EL+G
Sbjct: 180 DRITQQLPPDICLPAVGQGALALETRSDDSEVLALVAFLHDEDTAAAVTAERSFLNELEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + + L +L+ DG + G A ++GR AQ++ +
Sbjct: 240 GCQVPIGVYGRVENGELVLDAAILSLDGAAALKDRICGAPAAAEDLGRKLAQHMYVTGGR 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|269137476|ref|YP_003294176.1| porphobilinogen deaminase [Edwardsiella tarda EIB202]
gi|267983136|gb|ACY82965.1| porphobilinogen deaminase [Edwardsiella tarda EIB202]
gi|304557549|gb|ADM40213.1| Porphobilinogen deaminase [Edwardsiella tarda FL6-60]
Length = 317
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 152/284 (53%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A R L+ P I ++P+ T+GD + + L ++GGKGLF
Sbjct: 12 LRIATRQSPLALWQAHYVRDQLL--THWPQLTIELVPMVTRGDVLLDTPLAKVGGKGLFV 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L S
Sbjct: 70 KELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQLPPGS 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ + I
Sbjct: 130 VVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQLDDRI 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE + + + L+ +NH DT V ERA L+G C+
Sbjct: 190 RTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHADTALRVCAERAMNTRLEGGCQ 249
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A G L+ +V A DG R G A +G
Sbjct: 250 VPIGSYAEIDGDQLWLRALVGAPDGSRIIRGERRGPLTQAEAMG 293
>gi|148204|gb|AAA67601.1| porphobilinogen deaminase [Escherichia coli str. K-12 substr.
MG1655]
Length = 320
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDXPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 131 IVGTSSLRRQCQLGERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 191 RAGLPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V DG R G DA +G A+ +
Sbjct: 251 VPIGSYAELIDGEIWLRALVGRPDGSQIIRGERRGAPQDAEQMGISLAEEL 301
>gi|237801592|ref|ZP_04590053.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331024452|gb|EGI04508.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 313
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A +S L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSTREIRIATRQSALALWQAEYVKSRLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEDRADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFDSLQA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G + A+ +
Sbjct: 239 NGGCQVPIACYAILEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVEVAEAL 294
>gi|120600512|ref|YP_965086.1| porphobilinogen deaminase [Shewanella sp. W3-18-1]
gi|146294670|ref|YP_001185094.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32]
gi|158512986|sp|A1RPD7|HEM3_SHESW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217787|sp|A4YBG2|HEM3_SHEPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120560605|gb|ABM26532.1| porphobilinogen deaminase [Shewanella sp. W3-18-1]
gi|145566360|gb|ABP77295.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32]
gi|319427906|gb|ADV55980.1| porphobilinogen deaminase [Shewanella putrefaciens 200]
Length = 310
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELEVAILEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKTISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I ++ E P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSGRIASFISAEQSLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEINGDEMTLRGLVGNPDGSEIIEGIITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|161505549|ref|YP_001572661.1| porphobilinogen deaminase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189028154|sp|A9MJ10|HEM3_SALAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|160866896|gb|ABX23519.1| hypothetical protein SARI_03714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 313
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 156/291 (53%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LKIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S
Sbjct: 64 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDDLPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLASRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGAI IE +++ + L+ +NH T V ERA L+G C+
Sbjct: 184 RTALPPEVSLPAVGQGAIGIECRLDDARTHALLAPLNHPQTALRVTAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 244 VPIGSYAEIFNGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 294
>gi|242237686|ref|YP_002985867.1| porphobilinogen deaminase [Dickeya dadantii Ech703]
gi|242129743|gb|ACS84045.1| porphobilinogen deaminase [Dickeya dadantii Ech703]
Length = 313
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 157/284 (55%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVQQRLQACH--PGLRVELVPMVTRGDVLLDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + L + R+D RD F+S+ +L L +
Sbjct: 64 KELELALLEDRADIAVHSMKDVPVEFPAQLGLVTICERDDPRDAFVSNRYANLDALPPGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+ RL E I
Sbjct: 124 VVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLGKLDNGDYDAIILAVAGLNRLGLEGRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L+G C+
Sbjct: 184 RAALSPEQSLPAVGQGAVGVECRLDDTRTRALLAPLNHDDTAARVLAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A +G ++ +V + DG R G R DA +G
Sbjct: 244 VPIGSYAELQGDAIWLRALVGSPDGSRIIRGERTGRRQDAEQLG 287
>gi|90406695|ref|ZP_01214888.1| porphobilinogen deaminase [Psychromonas sp. CNPT3]
gi|90312148|gb|EAS40240.1| porphobilinogen deaminase [Psychromonas sp. CNPT3]
Length = 311
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 162/296 (54%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A +S L+ H P + ++ + TKGD+I + L ++GG
Sbjct: 1 MSNKIIRIATRHSPLAMWQANFVKSELLKWH--PELQVELLAMKTKGDKILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL ++ RED RD F+S+ ++
Sbjct: 59 KGLFVKELEVAILEGRADIAVHSMKDVPVDFPEGLGLAVICEREDPRDAFVSNHFANIAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R DI V D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRAQRPDIKVKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++E+ P+ GQGA+ IE +++ + L+K + H T V ERA L
Sbjct: 179 MHDRIASYMSVEESLPAVGQGAVGIECRLDDMQTLALLKPLEHRITRLRVTAERAMNLAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I + K TL+ G+V + DG G DA +G + AQ +
Sbjct: 239 QGGCQVPIGSYCILKEDTLWLRGLVGSVDGTHIIRKEIRGKVADAEQMGLNLAQQL 294
>gi|254784450|ref|YP_003071878.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901]
gi|237686105|gb|ACR13369.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901]
Length = 324
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 170/289 (58%), Gaps = 6/289 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LAL A +S L H P + ++PL+++GD+I + L ++GGKG
Sbjct: 15 KHTLRIATRKSALALWQAEFVKSELCRHH--PELAVELVPLTSRGDKILDVPLAKVGGKG 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ +I+GE D AVHS KD+P + +GL ++ RED RD +S+ +L +
Sbjct: 73 LFVKELEQAIIAGEADIAVHSMKDVPMEFPQGLGLAVICEREDPRDALVSNKYSNLDAIP 132
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR++ LL R D+ V RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 133 AGAVIGTSSLRRQSQLLAMRPDLEVTFLRGNVNTRLAKLDAGEYDAIILASAGLKRLQMV 192
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E + E P+ GQGA+ IE ++ + L++ ++H T +V ERA +L+G
Sbjct: 193 DRIAEFIAPEVMLPAGGQGAVGIECRTDDQETLALLQPLHHGVTEQAVLAERAMNRKLEG 252
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIG 289
C+ I GFA + + L+ G+V DG ++ +V G+ DA +G
Sbjct: 253 GCQVPIGGFAIHQDNQLWVRGLVADPDGSEVLYDQVI--GDPADAETLG 299
>gi|300115116|ref|YP_003761691.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113]
gi|299541053|gb|ADJ29370.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113]
Length = 314
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/268 (42%), Positives = 156/268 (58%), Gaps = 2/268 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LAL A ++L H P ++ ++ +ST+GD+I + L +IGGKG
Sbjct: 8 KTCLRIATRKSLLALWQAEYVANTLR--HHYPDLSVELVRMSTQGDKILDTPLAKIGGKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L L
Sbjct: 66 LFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLDSLP 125
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA AG+KRL+
Sbjct: 126 EGARLGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDGIILATAGLKRLELT 185
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A L G
Sbjct: 186 HRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITLQAERALNARLAG 245
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ IAG+A + L +V DG
Sbjct: 246 GCQVPIAGYAELEDERLRLRALVGQPDG 273
>gi|108761567|ref|YP_630875.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622]
gi|123374611|sp|Q1D8Z8|HEM3_MYXXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108465447|gb|ABF90632.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622]
Length = 314
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 151/265 (56%), Gaps = 2/265 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++ ++T+GDR + L+ +GGKGLF
Sbjct: 5 VRIATRQSPLALWQARHVGALLTSRH--PGLEVTLVEMTTEGDRFLSAPLSAVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G D AVHS KDM + +GL ++A RED RDVF +L L +
Sbjct: 63 KEIEQALLDGRADIAVHSLKDMTSVFPEGLILAAVPEREDPRDVFCGLGGLTLDTLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR +L R D+ ++ RG ++TRL + LLAYAG+KRL E VI
Sbjct: 123 RVGTSSLRRSCILRSRRPDVDIVSVRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L E P+ GQG + I+ ++ + + L+ + H T +V ERA LA+L+G C
Sbjct: 183 TQVLPPEVSLPAVGQGVLAIQCRTDDARVRALLVPLEHATTRIAVTAERALLAKLEGGCT 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
+AG+A G T++ G+V DG
Sbjct: 243 VPLAGYATVSGDTVFLRGLVGRPDG 267
>gi|78044433|ref|YP_360051.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123756773|sp|Q3ACT3|HEM3_CARHZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77996548|gb|ABB15447.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 311
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 167/294 (56%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK +G+R S LAL L +H P N I+ + TKGD+I + L +IG KG
Sbjct: 2 KKEVIVGSRDSALALWQTNWVVERLSKIH--PEINFKIVTMKTKGDKILDVALAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E L++ ID AVHS KD+PT L +GL+I A+ RE DVFIS +L
Sbjct: 60 LFTKELEHALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCEREYPGDVFISPKGFKFLELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR A +L R D+ I RG + TR K+ I+LAYAG+KRL E
Sbjct: 120 QGARIGTSSLRRIAQILAVRPDLQAIPLRGNLPTRFRKMEEMDLDGIILAYAGVKRLGYE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+L+ + P+ GQG+I +E ++ +EL+K I+H T ++ ERAFL L+G
Sbjct: 180 DKITEMLSFDLCLPAVGQGSIGVEIRADDTFIEELLKPIDHFATNRAIRAERAFLKRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I ++ K + L+ G+V + DGK+ + + G+ + +G A+ +
Sbjct: 240 GCQIPIGAYSEVKENRLHLKGVVASLDGKLVIKGEKEGSIEEPEKVGISLAEEL 293
>gi|59727198|gb|AAW92125.1| hydroxymethylbilane synthase [Enterobacter asburiae]
Length = 313
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDSLDALPKGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 124 VVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L+G C+
Sbjct: 184 RVALPPELSLPAVGQGAVGIECRLDDARTRELLAPLNHDETAIRVKAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A L+ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELTEGELWLRALVGAPDGSQMVRGERRGKAQDAEQLGVSLAEEL 294
>gi|283787518|ref|YP_003367383.1| porphobilinogen deaminase [Citrobacter rodentium ICC168]
gi|282950972|emb|CBG90649.1| porphobilinogen deaminase [Citrobacter rodentium ICC168]
Length = 313
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDALMANH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLEKRADIAVHSMKDVPVEFPAGLGLVTICEREDPRDAFVSNNYPSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + Q L+ +N E T V ERA L+G C+
Sbjct: 184 RAALPPEVSLPAVGQGAVGIECRLDDRRTQALLAPLNDEITALRVKAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A L+ +V A DG + R G+ A +G A+ +
Sbjct: 244 VPIGSYAEMIDGELWLRALVGAPDGSLMVRGERRGSPEQAEQMGISLAEEL 294
>gi|330993440|ref|ZP_08317375.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1]
gi|329759470|gb|EGG75979.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1]
Length = 360
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 168/321 (52%), Gaps = 25/321 (7%)
Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
P ++GTR SPLAL AF T + L D+ H I ST GD++ NR L E
Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQI-----STTGDQVQNRKLAE 95
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------ 111
IGGKGLF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I
Sbjct: 96 IGGKGLFAKEIHEALLDGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDVLILGPGCG 155
Query: 112 -SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
A L +++G +S+RR+A +L R D+ RG ++TRL+KL + A L
Sbjct: 156 EPDPADPYSVLPQGALVGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAARQCDATL 215
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LAYAG++RL E IL+ P+ GQG + + ++ + +EL+ I +
Sbjct: 216 LAYAGLRRLGMEDRADVILDPTIMVPAAGQGIVGVTVRESDVELRELLSAIEDYEARAVA 275
Query: 231 NCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
ERA LAELDGSC++ I G+A L+ G+V DG + S +G D
Sbjct: 276 TAERALLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPAD 335
Query: 285 AINIGRDAAQYIRFISNKNVF 305
A +GRD + +R S ++F
Sbjct: 336 AARLGRDLGRSLRADSPADIF 356
>gi|226951768|ref|ZP_03822232.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244]
gi|226837483|gb|EEH69866.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244]
Length = 305
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKGL
Sbjct: 2 KTLKIATRQSPLALWQAEHIRSRLNTLY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL
Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G
Sbjct: 180 RIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C+ IAG+A L G V + DGK + G+ A +G AQ
Sbjct: 240 CQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQ 290
>gi|288550563|ref|ZP_06391088.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316]
gi|288314627|gb|EFC53565.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316]
Length = 318
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H + ++P+ T+GD I + L ++GGKGLF
Sbjct: 11 LRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL + + S
Sbjct: 69 KELELALLENRADIAVHSMKDVPVEFPQGLGLVTICERDDPRDAFVSNHYDSLDAMPVGS 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + RG + TRL KL+N + AI+LA AG+KRL E I
Sbjct: 129 VVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGEYDAIILAVAGLKRLDLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + + L+ +NH+DT V ERA L+G C+
Sbjct: 189 RVALPPEFSLPAVGQGAVGIECRLDDDRTRALLAPLNHDDTAIRVKAERAMNTRLEGGCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A L+ +V A DG R G DA +G A+ +
Sbjct: 249 VPIGSYAELSNGELWLRALVGAPDGSQMVRGERRGKPQDAEALGVSLAEEL 299
>gi|155967344|gb|ABU41508.1| HemC [Heliophilum fasciatum]
Length = 315
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 162/287 (56%), Gaps = 3/287 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P IGTR S LAL L + P I + TKGD+I + L +IG KGL
Sbjct: 6 RPIVIGTRDSALALWQTHWVLEQLQ--ARFPEQRFEIKAIKTKGDKILDVALAKIGDKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ GE+D AVHS KD+PT+L +GL + A RED RDV I TA++L +L
Sbjct: 64 FTKELEVAMLEGEVDMAVHSLKDLPTQLPEGLTVGAMCIREDYRDVLIGRTARTLAELKP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRRK+ + + R D+ ++D RG ++TR+ K+ I+LA AG+ RL
Sbjct: 124 GARVGTASLRRKSQIWKVRPDLELLDIRGNLQTRMRKMEEQDLDGIILAAAGVLRLGWAD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + ++ + P+ GQG++ IE + +V +NH+DT D + ERA + L+G
Sbjct: 184 KITQYIDEDVCLPAVGQGSVGIEIRDGDEAIARVVGALNHKDTADCITAERALMRTLEGG 243
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C+ I + +L +G+V + DG+ G+R +A ++G
Sbjct: 244 CQVPIGALGKLGEDDSLTLHGVVASLDGREICRDQVTGHRSEAADLG 290
>gi|327469193|gb|EGF14665.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK330]
Length = 306
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 169/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + L P+ QGA+ +E + + +L+ + E T V ERA LA+
Sbjct: 180 DQSHLHIQPLETSLCLPAISQGALAVECREEDKELLQLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA KG ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAAFAQKKGQDYQLEAMLAKEDGQCVF-VSLKGQDGQEL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|148262442|ref|YP_001229148.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4]
gi|189028092|sp|A5GCW2|HEM3_GEOUR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146395942|gb|ABQ24575.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4]
Length = 318
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 162/290 (55%), Gaps = 5/290 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MALKTLRIGTRASQLALWQANWVKSELE--KRYPGLEVSLLKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS + D
Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGIK-FAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL A++LA AG+KRL
Sbjct: 118 LPKGAKIGTSALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E L + P+ GQGA+ IE ++N + + + NH T +V ERA L
Sbjct: 178 FTDKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKSAIDFFNHPATAYAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINI 288
+G C+ IA F +G L G + + DGK + VS C+ + I
Sbjct: 238 EGGCQVPIAAFGEVEGDQLKLTGFIASVDGKTSVKGSVSGPAEECEKLGI 287
>gi|156742007|ref|YP_001432136.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941]
gi|189028097|sp|A7NKU8|HEM3_ROSCS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|156233335|gb|ABU58118.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941]
Length = 303
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 161/294 (54%), Gaps = 3/294 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IGTR S LAL R +L H P + + ++T+GD I +R L IG KG
Sbjct: 2 RNSLTIGTRASKLALVQTHMIRDALQAAH--PGLTVAVERITTRGDIILDRPLNAIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF EIE+ + +G +D AVHSAKD+P+ L + ++ R D RD ++ +L L
Sbjct: 60 LFVVEIEEAMRAGRVDLAVHSAKDLPSTLPPDMTLAVCPRRADPRDALVAQPGMTLASLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL E
Sbjct: 120 HGARVGTSSLRRACQLRALRPDLTLLDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E+L + P+ GQG I +E + + L+ ++ ++ ERAFLA + G
Sbjct: 180 EVITELLEPDVLIPAVGQGIIGVEARAGDDEVLRLLAPLDDPAARAAITAERAFLARIGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ + A +G L YG++ A DG++ + R+G+ D +G A+ +
Sbjct: 240 GCRVPVGALALLEGDELLLYGMIGALDGRMVRGM-RSGSASDPAGLGSALAEEL 292
>gi|239995985|ref|ZP_04716509.1| porphobilinogen deaminase [Alteromonas macleodii ATCC 27126]
Length = 312
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 167/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGKGL
Sbjct: 8 RTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L
Sbjct: 66 FIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPQ 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ E
Sbjct: 126 GAVVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLEMES 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ IE ++ + +L++ +NH DT V ERA L+G
Sbjct: 186 RIRMPLPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLEGG 245
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I FA G L G+V DG S +R A +IG + A+ +
Sbjct: 246 CQVPIGSFATLDGDVLTLTGMVGKPDGSELLFASATASREKAADIGVEVAESL 298
>gi|325696921|gb|EGD38808.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK160]
Length = 306
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQKLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + ++L+ + + T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDDKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA KG ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAAFAQKKGQAYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|292493894|ref|YP_003529333.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4]
gi|291582489|gb|ADE16946.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4]
Length = 310
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 154/268 (57%), Gaps = 2/268 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LAL A +L H P ++ ++ +ST+GD+I + L ++GGKG
Sbjct: 4 KTCLRIATRKSLLALWQAEYVADTLR--HHHPGLSVELVRMSTQGDKILDTPLAKVGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ L+SGE D AVHS KD+P L + L IS RED RD F+S+ Q L L
Sbjct: 62 LFVKELEQGLLSGEADIAVHSMKDVPVVLPEDLHISVICEREDPRDAFVSNHWQQLDSLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA +G+KRL
Sbjct: 122 EGARVGTSSLRRQSQVRERRPDFHVLDLRGNVNTRLAKLDNNEFDGIVLAASGLKRLGLT 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+L E P+ GQGAI IE + +EL+KV+ H T ++ ERA L G
Sbjct: 182 DRITELLAPEVSLPAIGQGAIGIECRKGDTATEELLKVLEHTPTRTTIRAERALNERLAG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ IA +A G L +V DG
Sbjct: 242 GCQVPIAAYAELDGERLRLRALVGQPDG 269
>gi|170719443|ref|YP_001747131.1| porphobilinogen deaminase [Pseudomonas putida W619]
gi|229836111|sp|B1J1V2|HEM3_PSEPW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169757446|gb|ACA70762.1| porphobilinogen deaminase [Pseudomonas putida W619]
Length = 313
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 161/294 (54%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFSSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEERITASISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHTDTADRVVAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+G C+ IA +A +G L+ G+V G R A +G A+
Sbjct: 239 NGGCQVPIACYAVLEGEQLWLRGLVGQPSGGTLLMADARAPRASAETLGVQVAE 292
>gi|197116806|ref|YP_002137233.1| porphobilinogen deaminase [Geobacter bemidjiensis Bem]
gi|226706286|sp|B5EBG8|HEM3_GEOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|197086166|gb|ACH37437.1| hydroxymethylbilane synthase [Geobacter bemidjiensis Bem]
Length = 318
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 156/272 (57%), Gaps = 3/272 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELE--KRYPDMTVTLTKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNGVK-FAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE +++N ++ + N DT +V ERA L
Sbjct: 178 FADQITEMLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNSPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+G C+ IA F G L G + + DGK+
Sbjct: 238 EGGCQVPIAAFGEVTGDQLKLTGFIASVDGKV 269
>gi|303230554|ref|ZP_07317308.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6]
gi|302514795|gb|EFL56783.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6]
Length = 312
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 170/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + +S L ++ P + ++ +TKGDRI N+ L E+GGKGLFT
Sbjct: 5 IRIGTRKSALALWQSEYVKSELQRLY--PGVTVELVHFNTKGDRILNKPLAEVGGKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L +
Sbjct: 63 AELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLPEGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL + I
Sbjct: 123 RIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLDDRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+G C+
Sbjct: 183 TQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ + + L ++ + DGK +E +G + +G++ A+ + K++
Sbjct: 243 VPMGVYGTVEKGQLNLKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGGKHIV 302
Query: 306 N 306
Sbjct: 303 E 303
>gi|119475318|ref|ZP_01615671.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143]
gi|119451521|gb|EAW32754.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143]
Length = 313
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 164/274 (59%), Gaps = 5/274 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A ++ L H P ++ ++ ++T+GD++ + L +IGG
Sbjct: 1 MPSNLVRIATRESPLALWQAEFIKAGLQAAH--PGLDVELLGMTTRGDKMLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL++S RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPEGLELSIICEREDPRDAFVSNHFKTVNE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L S +GTSSLRR+ L R D+++ID RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPLGSRVGTSSLRRQCQLRALRPDLNIIDLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I + + ++ P+ GQGA+ +E ++ + Q L+ +NH T V+ ERA L
Sbjct: 179 MEQRIADPIAVDSSLPAGGQGAVGVEARSDDHRIQALLAPLNHRSTALRVSAERAMNLRL 238
Query: 241 DGSCKSAIAGFAYC--KGS-TLYFYGIVLASDGK 271
G C+ IA FA +GS L G+V + DGK
Sbjct: 239 QGGCQVPIACFAELDIEGSGQLRLRGLVGSPDGK 272
>gi|53802806|ref|YP_115447.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath]
gi|53756567|gb|AAU90858.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath]
Length = 351
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGKGLF
Sbjct: 47 LRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGKGLFV 104
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L +
Sbjct: 105 KELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADA 164
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL ++ I
Sbjct: 165 RIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQERI 224
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L E P+ GQGAI +E + + L+ ++H T V ERA LDG C+
Sbjct: 225 AETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGCQ 284
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAGFA +G TL G+V DG G+ +G+ A+++
Sbjct: 285 VPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHL 335
>gi|296105312|ref|YP_003615458.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059771|gb|ADF64509.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 313
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQFDSLDALPKGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 124 VVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L+G C+
Sbjct: 184 RVALPPELSLPAVGQGAVGIECRLDDRRTRELLAPLNHDETAIRVKAERAMNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A L+ +V A DG R G DA +G A+ +
Sbjct: 244 VPIGSYAELINGELWLRALVGAPDGSQMVRGERRGKPQDAEQLGISLAEEL 294
>gi|330827978|ref|YP_004390930.1| Porphobilinogen deaminase [Aeromonas veronii B565]
gi|328803114|gb|AEB48313.1| Porphobilinogen deaminase [Aeromonas veronii B565]
Length = 330
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L +H P + ++P+ST+GD+I + L ++GG
Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALH--PQLQVELVPMSTQGDKILDTPLAKVGG 79
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +++ +
Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAE 139
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHTETRARVLTERAMNRAL 259
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 260 QGGCQVPIGAYALVEGEQIWLRGLVGSPDGTQVIRDEIRGPLADGEALGEQLAQRL 315
>gi|32033974|ref|ZP_00134230.1| COG0181: Porphobilinogen deaminase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 314
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTPLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L G
Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 245 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQL 298
>gi|294649011|ref|ZP_06726459.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC
19194]
gi|292825146|gb|EFF83901.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC
19194]
Length = 305
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKGL
Sbjct: 2 KTLKIATRQSPLALWQAEHIRSRLNALY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL
Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ ++D RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIVDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G
Sbjct: 180 RIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C+ IAG+A L G V + DGK + G+ A +G AQ
Sbjct: 240 CQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQ 290
>gi|262370151|ref|ZP_06063478.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046]
gi|262315190|gb|EEY96230.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046]
Length = 306
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 166/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L +H + ++ T+GD+I + L +IGGKGL
Sbjct: 2 KTLKIATRQSPLALWQAEHIRARLEALHA--GLTVELVTFVTQGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S++ S L
Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNSYVSFDALPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL +
Sbjct: 120 GAKVGTSSLRRKCQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + E P+ GQGA+ +E N+ +L+ + H DT V ERAF A L+G
Sbjct: 180 RICHTIRPELSLPAVGQGALGLECRANDQAVLDLIHPLLHIDTDTCVRAERAFNAYLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + + G V + DG+ + G+ +A ++G AQ +
Sbjct: 240 CQVPIAGYATLADNRIQLEGRVGSVDGQTLLKAQVAGDAAEAEHLGVVLAQEL 292
>gi|126208484|ref|YP_001053709.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae L20]
gi|126097276|gb|ABN74104.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 309
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 2 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L G
Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 240 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQL 293
>gi|148284479|ref|YP_001248569.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong]
gi|167008815|sp|A5CDH4|HEM3_ORITB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146739918|emb|CAM79909.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong]
Length = 298
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 165/291 (56%), Gaps = 5/291 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL A ++ + ++ + N +IIP+ T GD I N+ L +IGGKGLF
Sbjct: 3 IRVGSRASRLALIQA---QAVVQKINDLLGLNAIIIPIKTTGDLIQNKNLYDIGGKGLFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ ID AVHS KD+P L GLQ++A L R D+ D+ +S A + DL L +
Sbjct: 60 KEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGDVGDMLVSKIANKITDLPLGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV- 184
++GTSS+RR+ LL R D++++ FRG ++TR NK+ NN+ A +LA AG++RL +
Sbjct: 120 IVGTSSVRRRIQLLMLRPDLNIVLFRGNVDTRWNKIINNEVDATVLAAAGLQRLNYDTSR 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + P+ GQGAI IE ++ L INH+ TW + ER +L L+ C
Sbjct: 180 FCNIIPQSEMLPAIGQGAIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQ 294
I G A G+ + +L + + F G +IG +AA+
Sbjct: 240 NVPIGGIASYIGNNSFEAKFMLGDYNMRYFFYSEVRGKLQHGYDIGVEAAK 290
>gi|94264595|ref|ZP_01288379.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1]
gi|93454949|gb|EAT05186.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1]
Length = 311
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 2/283 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A + + H P + ++ + TKGD+I + L ++GGKGLF
Sbjct: 5 IRIGTRASMLALAQANWIKGRIEAQH--PQCRVELVKIITKGDKIVDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ GE+D AVHS KD+P +L +GL I RE+ D F+S+ Q+++ L +
Sbjct: 63 KEIEEAMLRGEVDIAVHSMKDVPAELPQGLHIGIITQRENPFDAFVSNLYQNIEALPTGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRK+ L R D+++ D RG ++TRL KL+ + I+LA AG+ RL
Sbjct: 123 RVGTSSLRRKSQLAALRPDLTIEDLRGNLDTRLRKLDEGQYDGIILAAAGLNRLDLAHRA 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E P+ QGA+ IE + E++ ++H T +V ERA+L L+G C+
Sbjct: 183 TFYFQAEQMLPAVAQGAVGIELRRADADLLEMLSFMDHRATTLAVKAERAYLKRLEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+AGFA G L +V A DG +VS++G +A I
Sbjct: 243 VPLAGFATLDGDRLQLDTLVAAIDGSRLLKVSKSGPAEEAEEI 285
>gi|148554852|ref|YP_001262434.1| porphobilinogen deaminase [Sphingomonas wittichii RW1]
gi|148500042|gb|ABQ68296.1| porphobilinogen deaminase [Sphingomonas wittichii RW1]
Length = 308
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 151/267 (56%), Gaps = 3/267 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR SPLAL A ++L H + I+ + T GDRI +R L E+GGK L
Sbjct: 7 RPLRLGTRGSPLALTQARMVIAALRAAHGWDETAVEIVAIKTSGDRIQDRALAEVGGKAL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+T+E++ L G ID AVHS KD+ T + I+A LPR D+RD I A SL L
Sbjct: 67 WTKELDIALADGTIDFAVHSMKDVETIRPAAIVIAAMLPRADVRDRLIG--AASLAALPQ 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS RR A + R R D+ ++ FRG ++TRL KL +A A LLA AG+ RL +++
Sbjct: 125 GARVGTSSPRRSAQVRRARPDVGIVLFRGNVDTRLGKLAAGEAEATLLAGAGLIRLGRDE 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ I IE+ P+P Q A+ IET + L+ I+ T SV+ ERA LA L
Sbjct: 185 IGHPI-PIEEMLPAPAQAAVGIETLAERTDVRALLGAIDDAPTNASVSAERALLAALGAD 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+S +A A G+ L ++ DG
Sbjct: 244 CRSPVAALAVRSGAGLLLRAEIMTEDG 270
>gi|114797250|ref|YP_761901.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444]
gi|123128354|sp|Q0BX92|HEM3_HYPNA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114737424|gb|ABI75549.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444]
Length = 321
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 170/309 (55%), Gaps = 7/309 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+GTR SPLALA A + + ++ I+ +T GD++T L GGKGL
Sbjct: 11 KRLRLGTRGSPLALAQAHQIADGIR-AASAGAYDCEIVAFTTTGDKLTTERLINSGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L GE+D AVHS KD+P+ L G +A+ RED RD F+SH A+S++DL
Sbjct: 70 FTRELDDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPE 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR+A L R D+ V+ FRG + TR+ KL A A LA AG+ RL +
Sbjct: 130 GATLGTASLRREAQALALRPDLKVVTFRGNVATRMRKLEEGLADATFLAMAGLTRLGLSE 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V I +ED P+ GQG I + T + + + E++ ++HE + + ERAFL +LDG
Sbjct: 190 VATPI-PLEDMLPAAGQGIIGVVTRDDVDTELLEILGQLSHEPSRVAAIAERAFLEKLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE----VSRNGNRCDAINIGRDAAQYIRF 298
SC++ IA + +G G VL+ G ++ + +GR AQ I F
Sbjct: 249 SCRTPIAAHLFDRGDEWQLIGEVLSPGGTTRWRGDGVCRKDATDAQLVLLGRAVAQEIIF 308
Query: 299 ISNKNVFNF 307
+ + + F
Sbjct: 309 AAKEALPVF 317
>gi|262273217|ref|ZP_06051033.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886]
gi|262222795|gb|EEY74104.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886]
Length = 311
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 156/270 (57%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RI TR SPLAL A +++L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MTSTPIRIATRQSPLALWQAEFVKAALEATH--PGLTVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ S+ +
Sbjct: 59 KGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYTSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAMRPDLVIKDLRGNVGTRLGKLDNGEYDAIILASAGLKRLN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ + + L++ + +T V CERA L
Sbjct: 179 LHDRIRNEIEPEEILPAVGQGAVGIECRLDDERVRALLEPLADANTTYRVLCERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I +A G ++ +V DG
Sbjct: 239 MGGCQVPIGSYAEIHGDQIHLRALVGEPDG 268
>gi|254360510|ref|ZP_04976659.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213]
gi|261493197|ref|ZP_05989725.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495982|ref|ZP_05992397.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153091050|gb|EDN73055.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213]
gi|261308358|gb|EEY09646.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311145|gb|EEY12320.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 311
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 162/287 (56%), Gaps = 2/287 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A +S L + H P ++ ++ + TKGD I + L +IGGKG
Sbjct: 2 KDILRIATRQSPLALWQANFVKSEL-EKH-FPQLSVELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ SL+DL
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICEREDPRDAFVSNNYHSLEDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL +
Sbjct: 120 KGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET N+ + + +NH T V ERA L G
Sbjct: 180 ERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKLNHSSTACCVMAERAMNTRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C+ I G+A +G L +V + DG S G++ +A +G
Sbjct: 240 GCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAKGHKQEAEQLG 286
>gi|90581042|ref|ZP_01236842.1| porphobilinogen deaminase [Vibrio angustum S14]
gi|90437738|gb|EAS62929.1| porphobilinogen deaminase [Vibrio angustum S14]
Length = 310
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 157/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSNQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIIVELVPMITKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L
Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLAALSDQATTTRVLCERAMNNYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I +A +G ++ +V DG
Sbjct: 239 QGGCQVPIGSYAELEGDQIWLRALVGEPDG 268
>gi|161594062|ref|NP_899724.2| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472]
gi|55976482|sp|Q7P207|HEM3_CHRVO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 4/290 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I +R S LA+ A ++ L ++ PH + I+ ++T+GD+I ++TL++IGGKGLF +
Sbjct: 6 IASRESRLAMWQAEHIQARLQALY---PHLTVEILGMTTQGDQILDKTLSKIGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E+ L+ G D AVHS KD+P L G ++A RED RD F+S+ Q L +L SV
Sbjct: 63 ELEQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A L ++V RG ++TRL KL++ + AI+LA AG+KRL + I+
Sbjct: 123 VGTSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQ 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L + P+ GQGA+ IE + L+ +NH DT ERA EL GSC+
Sbjct: 183 GELAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSCQV 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ FA TL G+V DG + S +G A +GR A+ +
Sbjct: 243 PLGAFATLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKL 292
>gi|169634609|ref|YP_001708345.1| porphobilinogen deaminase [Acinetobacter baumannii SDF]
gi|169153401|emb|CAP02532.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
baumannii]
Length = 314
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 167/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHICARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDICVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 301
>gi|61213332|sp|Q602K3|HEM3_METCA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 322
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGKGLF
Sbjct: 18 LRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGKGLFV 75
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L +
Sbjct: 76 KELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADA 135
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL ++ I
Sbjct: 136 RIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQERI 195
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L E P+ GQGAI +E + + L+ ++H T V ERA LDG C+
Sbjct: 196 AETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGCQ 255
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAGFA +G TL G+V DG G+ +G+ A+++
Sbjct: 256 VPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHL 306
>gi|332363838|gb|EGJ41617.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK355]
Length = 306
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 170/309 (55%), Gaps = 14/309 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I + Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQSGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRF 298
++ C IA FA G ++ DG+ IF VS G + A Q +R
Sbjct: 240 MNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCIF--VSLQGQDGQEL-----AEQAVRQ 292
Query: 299 ISNKNVFNF 307
+++K
Sbjct: 293 LADKGAVGM 301
>gi|13676388|dbj|BAB41183.1| porphobilinogen deaminase [Amaranthus tricolor]
Length = 198
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 133/197 (67%), Gaps = 1/197 (0%)
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
+IGGKGLFT+EI++ L++ EID AVHS KD+PT L + + L RED+RD FIS TA
Sbjct: 2 DIGGKGLFTKEIDEALLNNEIDIAVHSMKDVPTYLPDKIILPCNLEREDVRDAFISTTAS 61
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAG 175
SL DL SV+GT+SLRRK+ LL + V+D FRG ++TRL KLN A LLA AG
Sbjct: 62 SLADLPAGSVVGTASLRRKSQLLHRYPSLEVLDNFRGNVQTRLRKLNEGLVQATLLALAG 121
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KRL + + +L+I+D P+ QGAI I ++ K + ++NHE+T +V CERA
Sbjct: 122 LKRLNMTENVSSVLSIDDMLPAVAQGAIGIACLQDDDKMANYLALLNHEETQLAVACERA 181
Query: 236 FLAELDGSCKSAIAGFA 252
FL LDGSC++ IAG+A
Sbjct: 182 FLETLDGSCRTPIAGYA 198
>gi|325576792|ref|ZP_08147407.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC
33392]
gi|325160998|gb|EGC73116.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC
33392]
Length = 310
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 155/267 (58%), Gaps = 2/267 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL DL
Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDDLPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ L + R D+ + RG + TRL+KL+N + AI+LA AG+ RL +
Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G
Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ I G+A + ++ +V +DG
Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGETDG 269
>gi|330812535|ref|YP_004356997.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380643|gb|AEA71993.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 313
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 164/294 (55%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MCPREIRIATRKSALALWQAEYVKARLEAAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + L+ ++HEDT V ERA L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+G C+ IA +A +G ++ G+V +G R DA +G A+
Sbjct: 239 NGGCQVPIACYAVLEGEQVWLRGLVGDPNGGRLLSAEARAPRHDAEALGVRVAE 292
>gi|325693629|gb|EGD35548.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK150]
Length = 306
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + ++L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSFQGQDGQEL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|157829875|pdb|1AH5|A Chain A, Reduced Form Selenomethionine-Labelled Hydroxymethylbilane
Synthase Determined By Mad
Length = 313
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 155/284 (54%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++P T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLXASH--PGLVVELVPXVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S
Sbjct: 64 KELEVALLENRADIAVHSXKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I
Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+
Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAXNTRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A ++ +V A DG R G DA G
Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQXG 287
>gi|324990199|gb|EGC22137.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK353]
Length = 306
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 KGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAAFAQKNGQNHQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|315303323|ref|ZP_07873952.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596]
gi|313628303|gb|EFR96807.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596]
Length = 309
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 166/290 (57%), Gaps = 9/290 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PSIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L G ID AVHS KD+P+ L +GL I A RE D F+ +T + KDL
Sbjct: 60 LFVSEVEQALSDGLIDFAVHSMKDVPSSLKEGLTIGAIPKRESALDCFVFNTVATFKDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A +LR R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 KGAVIGTSSLRRAAQILRKRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P P+ GQGA+ IE ++ + +++ I+HE+T V ER FL
Sbjct: 178 WLENTTLKLEDIPPELCLPAVGQGALAIECRESDQQICDMLASIHHEETGACVEAERIFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
+L+G C+ IAGFA T++F G+V SDG ++G + I
Sbjct: 238 KKLNGGCEIPIAGFATKTDGTVHFKGLVGNSDGTTILSAEQSGKNPETIG 287
>gi|78224425|ref|YP_386172.1| porphobilinogen deaminase [Geobacter metallireducens GS-15]
gi|123742774|sp|Q39QM7|HEM3_GEOMG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78195680|gb|ABB33447.1| Porphobilinogen deaminase [Geobacter metallireducens GS-15]
Length = 318
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 5/290 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MAPKQLRIGTRASQLALWQANWVKGELE--KRYPGMAVELVKIKTMGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVK-FAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A +L+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQILKVRPDLQMVVIRGNVETRIRKLTDENLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E L +E P+ GQGA+ IE +++ ++ + NH DT +V ERA L
Sbjct: 178 FADQVSEYLPVELSLPAIGQGALGIECRLDDETIKDTIAFFNHPDTAHAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVSRNGNRCDAINI 288
+G C+ IA G TL G V + DG + +S C+ + I
Sbjct: 238 EGGCQVPIAAHGQVSGDTLTLTGFVASVDGTRSVKDTISGPVTECEKLGI 287
>gi|332363288|gb|EGJ41073.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK49]
Length = 306
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAITQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISRREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 KGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|496214|gb|AAA18907.1| porophorbilinogen deaminase [Pseudomonas aeruginosa]
Length = 314
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 3/290 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHA-FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + RI TR S LAL A + + L H P + ++P++++GD++ + L +IG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVNSTGLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 GKGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L SV+GTS L R+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 QLPAGSVVGTSRLGRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGVIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA
Sbjct: 179 GFESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
L+G C+ IA +A +G L+ G+V DG DA +G
Sbjct: 239 LNGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLADAEALG 288
>gi|332365713|gb|EGJ43471.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1059]
Length = 306
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 168/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISKREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA A KG ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQGQDGQQL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|213971710|ref|ZP_03399816.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1]
gi|301386723|ref|ZP_07235141.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato Max13]
gi|302062167|ref|ZP_07253708.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato K40]
gi|302130377|ref|ZP_07256367.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213923528|gb|EEB57117.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1]
Length = 313
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDSADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEAL 294
>gi|285019346|ref|YP_003377057.1| hydroxymethylbilane synthase [Xanthomonas albilineans GPE PC73]
gi|283474564|emb|CBA17065.1| probable hydroxymethylbilane synthase protein [Xanthomonas
albilineans]
Length = 302
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 165/286 (57%), Gaps = 4/286 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR SPLAL + + L H P ++++P+ST+GD + +R+L IGGKGL
Sbjct: 2 KILRIATRKSPLALWQSEYVAACLRRAH--PQLEVLLVPMSTRGDEVLDRSLAAIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G+ DCAVHS KD+P +L + +SA LPR D D IS+ +L L L
Sbjct: 60 FLKELELAMLRGDADCAVHSLKDVPMELERPFVLSAILPRADSADALISNLYAALDALPL 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL E+
Sbjct: 120 GARVGTSSLRRQAQLRARRPDLQLLDLRGNVNTRLAKLDNGDYDAIVLACAGLQRLGLER 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + L D+ P+P QGAI +E + A L V++ T V ERA L GS
Sbjct: 180 RITQRLQAPDWLPAPAQGAIAVECRQDMAAACALFAVLDDVATRTCVEAERAMNRALHGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVL-ASDGKIFH-EVSRNGNRCDAIN 287
C +A FA +G L G+V +DG++ ++ R+ A+
Sbjct: 240 CHVPVAAFAQWRGEDLLLQGLVGDVADGRLVRAQIQRSAQDPQALG 285
>gi|28867368|ref|NP_789987.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|38257983|sp|Q88B91|HEM3_PSESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28850602|gb|AAO53682.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 313
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEAL 294
>gi|238018694|ref|ZP_04599120.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748]
gi|237865165|gb|EEP66455.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748]
Length = 319
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 170/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT
Sbjct: 12 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L +
Sbjct: 70 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPEGA 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I
Sbjct: 130 CVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+
Sbjct: 190 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 249
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ L ++ + DGK +E +G A +G++ A+ + K++
Sbjct: 250 VPMGVHGTINKGQLILKAMIASLDGKTVYEGEISGPAKKAEILGKNLAKALYEEGGKHIV 309
Query: 306 N 306
+
Sbjct: 310 D 310
>gi|262373963|ref|ZP_06067240.1| porphobilinogen deaminase [Acinetobacter junii SH205]
gi|262310974|gb|EEY92061.1| porphobilinogen deaminase [Acinetobacter junii SH205]
Length = 305
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 161/277 (58%), Gaps = 2/277 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L +++ P + ++ T+GD+I + L +IGGKGL
Sbjct: 2 KTLKIATRQSPLALWQAEHIRARLNELY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ +L
Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNQYAHFDELPH 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL +
Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L P+ GQGA+ +E ++ + EL+ + HE T V ERAF A L+G
Sbjct: 180 RIRHCLAPTLSLPAVGQGALGLECRADDQELLELISPLQHEVTSICVRAERAFNAYLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
C+ IAG+A + L+ G V + DGK + +G
Sbjct: 240 CQVPIAGYATITQNQLHIEGRVGSVDGKTLLKEQLSG 276
>gi|146313619|ref|YP_001178693.1| porphobilinogen deaminase [Enterobacter sp. 638]
gi|167008813|sp|A4WG12|HEM3_ENT38 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145320495|gb|ABP62642.1| hydroxymethylbilane synthase [Enterobacter sp. 638]
Length = 313
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 156/284 (54%), Gaps = 2/284 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H+ + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAQYVKQRLEACHQ--GLRVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL DL S
Sbjct: 64 KELEIALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYASLDDLPKGS 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I
Sbjct: 124 VVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQGA+ IE +++ + + L+ +NH++T V ERA L+G C+
Sbjct: 184 RVAMPPELCLPAVGQGAVGIECRLDDDRTRALLSPLNHDETAIRVQAERAMNMRLEGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A L+ +V A DG R G DA +G
Sbjct: 244 VPIGSYAELINGELWLRALVGAPDGSQMVRGERRGLPQDAEMLG 287
>gi|89093768|ref|ZP_01166714.1| porphobilinogen deaminase [Oceanospirillum sp. MED92]
gi|89081898|gb|EAR61124.1| porphobilinogen deaminase [Oceanospirillum sp. MED92]
Length = 313
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 177/305 (58%), Gaps = 4/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR SPLAL A ++ L H P N+ ++ +++KGD+I + L ++GGKGL
Sbjct: 3 RTIRIATRKSPLALWQAEYVKAELERHH--PGINVELLGMTSKGDKILDAPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ +++GE D AVHS KD+P + +GL ++ PRE D F+S+T S+++L
Sbjct: 61 FVKELEEAMLAGEADIAVHSMKDVPMEFPEGLGLAVICPREQPTDAFVSNTYNSIEELPE 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A + R D+ + RG + TRL KL++ + AI+LA AG+ RL+ +
Sbjct: 121 GAVVGTSSLRREAQIREKRPDLQIKWLRGNVNTRLRKLDDGEYDAIILASAGLIRLEMPE 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +++E P+ GQGA+ IE ++ + EL+K ++ ++T V+ ERA L+G
Sbjct: 181 RIRSEISVEFSLPAGGQGAVGIECRTDDHELLELLKPLHDQETAWRVSAERAMNRRLEGG 240
Query: 244 CKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IA +A S LY G+V DG + G A +G A +
Sbjct: 241 CQVPIACYATLNDDNSELYLRGLVAKPDGTLILRDEERGTPEQAEQLGITLADRLLAAGA 300
Query: 302 KNVFN 306
K++ +
Sbjct: 301 KSILD 305
>gi|254522867|ref|ZP_05134922.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14]
gi|219720458|gb|EED38983.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14]
Length = 303
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 152/267 (56%), Gaps = 3/267 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 VRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL+ L + +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFALPAMLTRHDPADGFVSNLYASLEALPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + I
Sbjct: 122 RVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGQRI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L + P+P QGA+ +E N + L ++ T V ERA L GSC
Sbjct: 182 VARLQPPQWLPAPAQGAVAVECDGGNARLMALFAGLDDASTRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGK 271
+A A +G L+ G+V ASDG+
Sbjct: 242 VPVAAIAQWQGDDLHLQGLVGSASDGR 268
>gi|189423573|ref|YP_001950750.1| porphobilinogen deaminase [Geobacter lovleyi SZ]
gi|238058916|sp|B3E2H7|HEM3_GEOLS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189419832|gb|ACD94230.1| porphobilinogen deaminase [Geobacter lovleyi SZ]
Length = 312
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A T+S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MAPKRLRIGTRASQLALWQANWTKSELE--ARYPGIQVELVKIKTMGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS + +
Sbjct: 59 KGLFVKEIEEAMLRGEIDLAVHSMKDVPTEFPEGLGLVVTTKREDPRDAFISDKV-TFSE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL
Sbjct: 118 LRQGARIGTSALRRQAQLLKARPDLEMVIIRGNVETRIRKLKEDNLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ E+L+ + P+ GQGA+ +E +++ E + +NH DT +V ERA L
Sbjct: 178 FTDVVTELLDTDFSIPAIGQGALGLECRLDDNATIEALAFLNHADTAAAVAAERALLKRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA G TL G + + DGK +G+ DA+ +G + A +
Sbjct: 238 EGGCQVPIAAHGTVSGDTLTLVGFIASVDGKQTVRDRISGSTADAVKLGTELADRLLAAG 297
Query: 301 NKNVFN 306
K +
Sbjct: 298 GKAILE 303
>gi|254447439|ref|ZP_05060905.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015]
gi|198262782|gb|EDY87061.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015]
Length = 313
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 167/293 (56%), Gaps = 4/293 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR SPLAL A E ++ + H P +I ++ ++TKGD+I + L +IGGKGL
Sbjct: 2 KTLRIATRQSPLALWQA-EDVAAKLKAH-YPDLDIELVKMTTKGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
F +E+E ++ G D AVHS KD+P ++ +GL +S L RED RD F+S+ SL +L
Sbjct: 60 FIKELEVGMLEGRADIAVHSMKDVPVDSEFPEGLHLSVILEREDPRDAFVSNRYNSLDEL 119
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT+SLRR+ +L + RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 120 PEGAVVGTASLRRQCQVLGRYPHLKTAVLRGSVGTRLGKLDDGQFDAIVLASAGLMRLGL 179
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I L E P+ GQGA+ IE ++ + +L+ + DT + ERA A L
Sbjct: 180 EERITAKLPPEISLPAIGQGAVGIECRKDDTELNKLLAPLADRDTTTRLKAERALNARLQ 239
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
G C+ IAG+A +G L G+V A DG + R G R A +IG A+
Sbjct: 240 GGCQVPIAGYAELEGDQLSMRGLVGAPDGSKLYTSERRGPRDQAADIGLAVAE 292
>gi|330876446|gb|EGH10595.1| porphobilinogen deaminase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 313
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEAL 294
>gi|313496556|gb|ADR57922.1| HemC [Pseudomonas putida BIRD-1]
Length = 313
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 2/265 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVMAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIV 265
+G C+ IA +A +G L+ G+V
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLV 263
>gi|289434836|ref|YP_003464708.1| hypothetical protein lse_1471 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171080|emb|CBH27622.1| hemC [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 309
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 169/297 (56%), Gaps = 7/297 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T +S DL
Sbjct: 60 LFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVESFHDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
+VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R L
Sbjct: 120 TAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L+G C+ IAGFA + F G+V +DG R G + + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTGE--NPMTIGNQVAEAL 294
>gi|328945742|gb|EGG39893.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1087]
Length = 306
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + +I+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDSIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + ++L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDKELRQLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA A KG ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|303229236|ref|ZP_07316032.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a]
gi|302516091|gb|EFL58037.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a]
Length = 312
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 170/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + +S L ++ P + ++ +TKGDRI ++ L E+GGKGLFT
Sbjct: 5 IRIGTRKSALALWQSEYVKSELQRLY--PGITVELVHFNTKGDRILDKPLAEVGGKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L +
Sbjct: 63 AELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLPEGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL + I
Sbjct: 123 RIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLDDRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+G C+
Sbjct: 183 TQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ + + L ++ + DGK +E +G + +G++ A+ + K++
Sbjct: 243 VPMGVYGTVEKGQLILKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGGKHIV 302
Query: 306 N 306
Sbjct: 303 E 303
>gi|324993558|gb|EGC25478.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK405]
gi|324995130|gb|EGC27042.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK678]
gi|327458927|gb|EGF05275.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1057]
gi|327461831|gb|EGF08162.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1]
Length = 306
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 168/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + ++L+ + E T V ER LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLKGQDGQQL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|90023307|ref|YP_529134.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40]
gi|89952907|gb|ABD82922.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40]
Length = 308
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 174/295 (58%), Gaps = 6/295 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR S LAL A + ++ L ++ P + + PL ++GD+I + L ++GGKGL
Sbjct: 2 KKIRIATRKSELALWQANDVKAKLEALY--PSLEVELFPLVSRGDKILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L++ E D AVHS KD+P + +GL+++ L RED RD ++S ++L L
Sbjct: 60 FVKELEHALLADEADIAVHSMKDVPMEFPEGLELAVILEREDPRDAWVSAGYENLDALPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
V+GTSSLRR++ +L R DI+V RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 120 GGVVGTSSLRRQSQILARRPDITVKFLRGNVNTRLAKLDAGEYDAIILAAAGLKRLKFGD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L+ E+ P+ GQGA+ IE + + +L++ ++H T + V ERA L+G
Sbjct: 180 RIRSYLSPEESLPAGGQGAVGIECRSADSETLKLLQALHHTITAEQVLAERAMNRRLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I FA + + L+ G+V DG I+ E++ G D +G + A+ +
Sbjct: 240 CQVPIGCFAVHQNNQLWLRGLVADPDGSKVIYDEMT--GAAADGEKMGVELAEKL 292
>gi|194367302|ref|YP_002029912.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3]
gi|238059002|sp|B4SJT8|HEM3_STRM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194350106|gb|ACF53229.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3]
Length = 303
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 153/267 (57%), Gaps = 3/267 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 VRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + + A L R D D F+S+ SL L + +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDEPFALPAMLTRHDPADGFVSNLYASLDALPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + I
Sbjct: 122 RVGTSSLRRQAQLRALRPDLQLLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGERI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L + P+P QGA+ +E +N + L ++ T V ERA L GSC
Sbjct: 182 VARLQPPQWLPAPAQGAVAVECDGSNARLMALFAGLDDAATRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGK 271
+A A +G L+ G+V ASDG+
Sbjct: 242 VPVAAIAQWQGQDLHLQGLVGSASDGR 268
>gi|242278118|ref|YP_002990247.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638]
gi|259647794|sp|C6BYB7|HEM3_DESAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|242121012|gb|ACS78708.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638]
Length = 308
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 165/299 (55%), Gaps = 2/299 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A L + + P + ++ + TKGD+I + L ++GGKGLF +E
Sbjct: 6 IATRGSKLALWQANHISDLLREEY--PGIEVQLLKIKTKGDKILDVPLAKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G D AVHS KD+PT+L +GL++ PRE D +S SLKDL +V+
Sbjct: 64 IEEALLDGRADLAVHSMKDVPTELPEGLEVGIIPPREAETDTLLSVKYDSLKDLPAGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ +L R D+ + RG ++TR+ KL N + AI++A AG+ RLK E
Sbjct: 124 GTSSLRRQSQVLALRDDLKIESLRGNLDTRVGKLLNGEFDAIVVATAGLNRLKLSAPKSE 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
IL F P+ QGA+ IE + + + Q+++ ++ E T V ER FL LDG C+
Sbjct: 184 ILGPPTFLPAVAQGALGIEYRIEDTEIQDILAFLHDEMTARQVKAERGFLTGLDGGCQVP 243
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IA ++ + + G V DG + + G DA +IG A+ + K + +
Sbjct: 244 IAAWSQLESDQVKLTGFVADIDGSSPIRMEKTGPAEDAWDIGLALAEEVLAAGAKEILD 302
>gi|224370660|ref|YP_002604824.1| HemC [Desulfobacterium autotrophicum HRM2]
gi|223693377|gb|ACN16660.1| HemC [Desulfobacterium autotrophicum HRM2]
Length = 325
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 160/294 (54%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK +IGTR S LAL A + + D + P + I+ + T GD I +R L+ +GGKG
Sbjct: 20 KKTIKIGTRGSKLALWQANHVKDRIED--QFPETEVEIMTIKTTGDMIVDRPLSMVGGKG 77
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIEK L+ ID AVHS KDMP +L GL I A RE+ DV IS+ SL DL
Sbjct: 78 LFVKEIEKALLESTIDMAVHSMKDMPGELPPGLVIGAVPARENPFDVLISNNNLSLADLP 137
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR + + R DI RG ++TRL KL + A LLA AG+ RL +
Sbjct: 138 KGARIGTSSLRRASQIKHARPDIETASIRGNLDTRLKKLAAGEFDATLLAAAGLIRLGMK 197
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI + + P+ GQGA+CIE+ + ++ +NH +T V+ ERAFL LDG
Sbjct: 198 TVITQYFDETIMIPAVGQGALCIESRQEDLDIAPVLAFLNHGETHTVVSGERAFLRRLDG 257
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
SC +A F + + G+V + DG+ + + G D G A+ +
Sbjct: 258 SCHIPVACFGRLEDHRVILTGLVASEDGRTILKETVAGTPEDPQKAGIALAETL 311
>gi|148545465|ref|YP_001265567.1| porphobilinogen deaminase [Pseudomonas putida F1]
gi|167008818|sp|A5VWX3|HEM3_PSEP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148509523|gb|ABQ76383.1| hydroxymethylbilane synthase [Pseudomonas putida F1]
Length = 313
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 2/265 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLET 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIV 265
+G C+ IA +A +G L+ G+V
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLV 263
>gi|323353345|ref|ZP_08087878.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66]
gi|322121291|gb|EFX93054.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66]
Length = 306
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 170/309 (55%), Gaps = 14/309 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L +L
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQTLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRF 298
++ C IA FA G ++ DG+ IF VS G + A Q +R
Sbjct: 240 MNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF--VSLQGQDGQEL-----AEQAVRQ 292
Query: 299 ISNKNVFNF 307
+++K
Sbjct: 293 LADKGAVGM 301
>gi|165976435|ref|YP_001652028.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|190150336|ref|YP_001968861.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|303251057|ref|ZP_07337243.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303253601|ref|ZP_07339739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307245920|ref|ZP_07528003.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307248006|ref|ZP_07530035.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307252646|ref|ZP_07534539.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307257056|ref|ZP_07538831.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307259334|ref|ZP_07541061.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307261494|ref|ZP_07543163.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307263677|ref|ZP_07545286.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165876536|gb|ABY69584.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|189915467|gb|ACE61719.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|302647521|gb|EFL77739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302650067|gb|EFL80237.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306853139|gb|EFM85361.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306855404|gb|EFM87578.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306859891|gb|EFM91911.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306864427|gb|EFM96335.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306866570|gb|EFM98431.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868777|gb|EFN00585.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870990|gb|EFN02725.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 314
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 162/294 (55%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTPLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L G
Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 245 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQL 298
>gi|288553611|ref|YP_003425546.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4]
gi|288544771|gb|ADC48654.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4]
Length = 310
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 173/301 (57%), Gaps = 6/301 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL + L K P+N + + TKGDRI + TL+++GGKGLF +E
Sbjct: 6 IGSRRSNLALTQTDWVINQLK--KKEVPYNFEVKKIVTKGDRILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L + EID AVHS KD+P+ + +G ++A RED RD FIS LKDL +++
Sbjct: 64 IEQALENKEIDIAVHSMKDVPSVMPEGFSLAAITEREDARDAFISLDHVKLKDLPSGAIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL R D+ V RG +ETRL KL AI+LA AG+ RL E+++
Sbjct: 124 GTSSLRRSAQLLAERPDLEVKWIRGNVETRLRKLKEEDFSAIILAAAGLNRLGYSEELVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L E P+ GQGA+ +E ++ + EL++ +N E T +V ER FL +++G C+
Sbjct: 184 EYLEPEMCVPAVGQGALGLECRSDDQEVIELIQKLNDEATALTVTAERTFLHKMEGGCQV 243
Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAG+A + + +V + DGK + + G D + +G + ++ + K +
Sbjct: 244 PIAGYATMQEDGQVSLTALVGSPDGKTILKDTVVGQ--DPVKVGEEVSERLLEKGAKEIL 301
Query: 306 N 306
+
Sbjct: 302 D 302
>gi|311693131|gb|ADP96004.1| porphobilinogen deaminase [marine bacterium HP15]
Length = 313
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 172/308 (55%), Gaps = 7/308 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVI--IPLSTKGDRITNRTLTEI 58
M K+ RI TR S LAL A ++ L +H NI + + + T+GD+I + L +I
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD----NITVELVKIKTQGDKILDVPLAKI 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ ++
Sbjct: 57 GGKGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNHYDNV 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ + AI+LA +G+KR
Sbjct: 117 DALPHGAVVGTASLRREAQLRAYRPDLEIRVLRGNVNTRLAKLDAGEYEAIVLASSGLKR 176
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I+ L P+ GQGA+ IE V++ +++ + H+DTWD V ERA
Sbjct: 177 LGFHERIRYCLPDTLSLPAVGQGALGIECRVDDQDLLAMLEPLKHKDTWDRVTAERALNR 236
Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ IA +A + T++ G+V A DG V R + +GR+ A+ +
Sbjct: 237 RLEGGCQVPIAAYALLEDDDTIWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEDLL 296
Query: 298 FISNKNVF 305
+ V
Sbjct: 297 ALGADKVL 304
>gi|307250258|ref|ZP_07532212.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857699|gb|EFM89801.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 314
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 163/294 (55%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + +L +IGGKG
Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTSLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L G
Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I GF+ G+ + +V A DG S +R +A +G A+ +
Sbjct: 245 GCQVPIGGFSTLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQL 298
>gi|330965074|gb|EGH65334.1| porphobilinogen deaminase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 313
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVHVAEAL 294
>gi|26986930|ref|NP_742355.1| porphobilinogen deaminase [Pseudomonas putida KT2440]
gi|38258017|sp|Q88RE5|HEM3_PSEPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|24981540|gb|AAN65819.1|AE016210_7 porphobilinogen deaminase [Pseudomonas putida KT2440]
Length = 313
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 2/265 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIV 265
+G C+ IA +A +G L+ G+V
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLV 263
>gi|330985679|gb|EGH83782.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 313
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ ++ AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDASEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVQVAEAL 294
>gi|299535618|ref|ZP_07048939.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1]
gi|298728818|gb|EFI69372.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1]
Length = 310
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 161/301 (53%), Gaps = 8/301 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + L P + + TKGD+I + L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L EID AVHS KDMP L GL I PRED RD FIS DL +V+
Sbjct: 64 IEQALYDKEIDFAVHSMKDMPAVLPDGLVIGCIPPREDARDAFISKGHVKFADLPAGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL R DI + RG ++TRL KL + AI+LA AG+KRL + V+
Sbjct: 124 GTSSLRRSAQLLTVRPDIEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSDDVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L +E P+ QG++ IE ++ + + + TW + ERAFLA +DG C+
Sbjct: 184 EFLPVEQCLPAVAQGSLGIECRADDAELLAELGKLTDSFTWQEAHAERAFLAAMDGGCQV 243
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IAG+A G + G+V A D + + + G DA IG + A ++ + F+
Sbjct: 244 PIAGYATSIGEEITLTGLVAAPDASVVFKETVVGT--DAQKIGEELAA---ILTEQGAFD 298
Query: 307 F 307
Sbjct: 299 L 299
>gi|269103733|ref|ZP_06156430.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163631|gb|EEZ42127.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 294
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 157/262 (59%), Gaps = 3/262 (1%)
Query: 29 DVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDM 87
++ K P +V ++P+ TKGD I + L ++GGKGLF +E+E ++ G D AVHS KD+
Sbjct: 10 ELEKAHPGLVVELVPMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGRADIAVHSMKDV 69
Query: 88 PTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISV 147
P + +GL + RED RD F+S+ SL++L S++GTSSLRR+ L R D+ V
Sbjct: 70 PVEFPQGLGLVTICEREDPRDAFVSNRYNSLEELPQGSIVGTSSLRRQCQLRSQRPDLIV 129
Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207
D RG + TRL KL++ + AI+LA AG+KRLK + I+ + E P+ GQGA+ IE
Sbjct: 130 KDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRAAIAPETSLPAVGQGAVGIEC 189
Query: 208 HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA 267
+++ + ++L+ +NH++T V CERA L G C+ I +A +G ++ +V
Sbjct: 190 RLDDTRVRDLLAALNHQETATRVLCERAMNNRLQGGCQVPIGSYAELQGDQIWLRALVGE 249
Query: 268 SDGK--IFHEVSRNGNRCDAIN 287
DG + E+S + N +A+
Sbjct: 250 PDGSQIVRGEISGSANDAEALG 271
>gi|291485230|dbj|BAI86305.1| porphobilinogen deaminase [Bacillus subtilis subsp. natto BEST195]
Length = 314
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 169/303 (55%), Gaps = 13/303 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ T+ + + +I P + I + TKGDRI + TL+++GGKG
Sbjct: 3 RTIKVGSRRSKLAMTQ---TKWVIQKLKEINPSFVFEIKEIVTKGDRIVDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 60 LFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ K
Sbjct: 120 EGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 179
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++
Sbjct: 180 QDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAME 239
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAA 293
G C+ IAG++ G + G+V + DGKI + + GN RC A+ R A
Sbjct: 240 GGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADRGAK 299
Query: 294 QYI 296
I
Sbjct: 300 DLI 302
>gi|260888475|ref|ZP_05899738.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185]
gi|330838215|ref|YP_004412795.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185]
gi|260861672|gb|EEX76172.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185]
gi|329745979|gb|AEB99335.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185]
Length = 311
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 173/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K IGTR S LAL A + L + + P ++V ++TKGDR+ + L +IGG
Sbjct: 1 MKKDTIVIGTRSSKLALWQADYVEAKLRE--RYPELHVVQKRMTTKGDRVLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++GEID AVHS KDMPT+L +GL ++A R D D +S Q+L +
Sbjct: 59 KGLFTKELEQAMLAGEIDLAVHSLKDMPTELPEGLMLAAVTERFDPGDAVVSPRYQTLAN 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A LL R D+ ++ RG + TRL KL AI+LA AG+KRL
Sbjct: 119 LPQGAKVGTSSLRRRAQLLAKRPDLEIVSLRGNVNTRLKKLEEENFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I EIL E P+ GQGA+ IE ++ L+ ++ T + ERAFLA +
Sbjct: 179 FHDRITEILPREICLPAVGQGALAIEARADDEATLSLIAFLDDAATRAAARAERAFLARV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ + +A L ++ + DG+ + + G+ DA IGR A+ + +
Sbjct: 239 EGGCQVPVGVYAEAADEALEMEAVIASIDGERLYRKKKAGSALDAEKIGRALAEELLAMG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 GKEILQ 304
>gi|301155139|emb|CBW14603.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae T3T1]
Length = 310
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 156/267 (58%), Gaps = 2/267 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL +L
Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDELPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ L + R D+ + RG + TRL+KL+N++ AI+LA AG+ RL +
Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNSEYDAIILASAGLIRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G
Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ I G+A + ++ +V +DG
Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGEADG 269
>gi|295399407|ref|ZP_06809389.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius
C56-YS93]
gi|312110034|ref|YP_003988350.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1]
gi|294978873|gb|EFG54469.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311215135|gb|ADP73739.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1]
Length = 310
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 167/291 (57%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL L + P + + TKGD+I + TL+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWVIEQLRQLG--APFEFEVKEIVTKGDKILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE +++ EID AVHS KDMP L GL I PRED RDV IS ++ DL +V+
Sbjct: 64 IEHAMLNNEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHRDVLISKNKETFADLPSGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ VI
Sbjct: 124 GTSSLRRSAQLLAKRPDLTIKWIRGNIDTRLAKLQTEDYDAIVLAAAGLVRMGWASDVIT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L + P+ GQGA+ +E ++ + +E ++ +N DT +V ERAFL +L+G C+
Sbjct: 184 EYLATDVCLPAVGQGALAVECRESDEELREWLQKLNDIDTERAVYAERAFLRQLEGGCQV 243
Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+A+ + +V + DGK ++ + +G+ D N+G AA +
Sbjct: 244 PIAGYAHVNNQNDIVLTALVASPDGKELYKETVSGS--DPENVGTTAADLL 292
>gi|310643595|ref|YP_003948353.1| phosphate abc transporter, atpase subunit [Paenibacillus polymyxa
SC2]
gi|309248545|gb|ADO58112.1| Phosphate ABC transporter, ATPase subunit [Paenibacillus polymyxa
SC2]
Length = 308
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 163/277 (58%), Gaps = 4/277 (1%)
Query: 8 IGTRCSPLAL---AHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL H E ++L H + VI + TKGDRI + TL+++GGKGLF
Sbjct: 6 VGSRQSALALTQTGHVIEDLNALCAEHGLD-LQFVIKKILTKGDRILDVTLSKVGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+DL
Sbjct: 65 VKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLEDLPSG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+ +
Sbjct: 125 AKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGWKDR 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + E P+ GQGA+ IE ++ + L+++ NH+DT +V ER FL L+G C
Sbjct: 185 ITSYIPEEACLPAVGQGALGIECRASDEELLALLRLYNHQDTSATVEAERTFLGVLNGGC 244
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
+ I A G + G+V + DG++ + + GN
Sbjct: 245 QVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGN 281
>gi|149199469|ref|ZP_01876504.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa
HTCC2155]
gi|149137404|gb|EDM25822.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa
HTCC2155]
Length = 307
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 174/308 (56%), Gaps = 12/308 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A +S L++V P I + + T+GD+I + +L +IGGKGLF
Sbjct: 3 LRIATRGSQLALWQAEHVKSRLLEVD--PSLEIELKIIKTQGDKILDVSLAKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ E D AVHS KD+P +L +GL + A L RED RD F+S+ +SL +L +
Sbjct: 61 KEIEQAMMDDEADLAVHSMKDVPAELPEGLILQAILEREDPRDAFVSNKYKSLDELPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR + L R + + RG + TRL KL+++K AI+LA AG+ RL+ I
Sbjct: 121 VVGTSSLRRASQLYR-QYPVKTELLRGNVNTRLAKLDDDKYDAIILAAAGLIRLEFGDRI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ + F PSPGQGA+ IE ++ + L+ +NH +T V ER F + GSC+
Sbjct: 180 ADSLDPDKFIPSPGQGAVGIECREDDAELCALLNKLNHTETSIRVKVEREFNLAIGGSCQ 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN---------IGRDAAQYI 296
+A G + V + DGK ++ +G+ D I R AA+ I
Sbjct: 240 VPAGCYATIDGDSFELRAFVASPDGKEYYREDMSGDLKDLPGKGTEIANKLIARGAAEII 299
Query: 297 RFISNKNV 304
+ + K+V
Sbjct: 300 KDLLGKDV 307
>gi|88813066|ref|ZP_01128308.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231]
gi|88789699|gb|EAR20824.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231]
Length = 309
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 163/294 (55%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLAL A + L + P + ++ ++T+GDRI + L IGG
Sbjct: 1 MSRRRLRIATRKSPLALWQAEHVAAELR--RRYPELEVELVAMTTRGDRILDTPLARIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +E+E+ + G D AVHS KD+P +L +G+ + L RED D F+++ Q L
Sbjct: 59 KALFVKELERGIWEGRADIAVHSIKDVPAELPEGMHLPVVLEREDPCDAFVANLYQDLAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GT+SLRR+ L R D+ V RG ++TRL KL + K AI+LA AG++RL
Sbjct: 119 LPIGARVGTASLRRECQLRAQRPDLRVGTLRGNVQTRLAKLESGKFDAIVLAAAGLRRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IE ++ + EL+ + H ++ + ERA A L
Sbjct: 179 LAERIRCTLTPEQSLPAVGQGALGIECRSDDREINELIAPLTHSPSYLRITAERAVNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+GSC+ IA FA GS ++ +V + DG G +++G A+
Sbjct: 239 EGSCQVPIAAFAVLDGSNIWLRALVGSRDGSCVLRGEIRGPAGTGVSLGGQLAE 292
>gi|255658552|ref|ZP_05403961.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544]
gi|260849356|gb|EEX69363.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544]
Length = 315
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 166/290 (57%), Gaps = 3/290 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ IGTR S LAL A L + P + ++TKGD+I + L +IGG
Sbjct: 1 MKNDTIVIGTRSSKLALWQADYVADCLR--KRYPELRVEKKLMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G ID AVHS KDMPT++ +GL ISA R D D +S ++L++
Sbjct: 59 KGLFTKELEQDMLAGGIDIAVHSLKDMPTEVPEGLVISAITERFDPGDAVVSPKYRTLEN 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRKA LL R D+ + D RG + TRL KL AI+LA AG+KRL
Sbjct: 119 LPQGAKVGTSSLRRKAQLLHARPDLQISDLRGNVNTRLEKLEREHFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L E P+ GQGA+ IET N+ + + L+ +N E T ERAFLA +
Sbjct: 179 FADRITEVLPREMVLPAVGQGALAIETRENDREVRNLIAFLNDEATVACARAERAFLARV 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ + +A + L+ ++ + DG + + G+ +A ++G
Sbjct: 239 EGGCQVPVGVYAVPEAEGRLHVEAVIASLDGARLYRDAAVGSAAEAESLG 288
>gi|94969590|ref|YP_591638.1| porphobilinogen deaminase [Candidatus Koribacter versatilis
Ellin345]
gi|123256362|sp|Q1INI6|HEM3_ACIBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94551640|gb|ABF41564.1| hydroxymethylbilane synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 311
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 168/291 (57%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL A + L + H + + + T GD+I + L ++G KG+FT
Sbjct: 4 LRIGSRGSQLALWQANHISALLRERG----HEVELEIIKTTGDKILDVALAKVGTKGMFT 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L +G++D AVHS KD+PT+L +G +++A RE+ RDVF+S S+ L +
Sbjct: 60 KEIEEALAAGKVDVAVHSLKDLPTELPQGFELAAVTKRENPRDVFLSVKYDSISGLPQGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A + R D+ + RG ++TR+ KL + AI+LA+AG+ RL K +++
Sbjct: 120 KVGTSSLRRQAQIKAIRPDLEIFPLRGNVDTRVRKLEQGEYDAIILAFAGLNRLGKTQLV 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KEI++ + P+ GQGA+ IE + + + +E++ +N D + ERA L +L G C+
Sbjct: 180 KEIISEDVMCPAAGQGALGIEIRLGDTRMREILSFLNDYDARATTTAERALLNQLGGGCQ 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I FA K ++ I DG S++G D ++G + + +
Sbjct: 240 VPIGAFAEVKDGQVHLTAICARPDGSEILRESKSG--ADPAHLGEEVGKTL 288
>gi|88861269|ref|ZP_01135901.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2]
gi|88816750|gb|EAR26573.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2]
Length = 312
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 165/288 (57%), Gaps = 2/288 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A ++ L ++H P + ++P+ST+GD+I + L +IGGKGLF
Sbjct: 8 LRIATRKSALALWQAEFVKAQL-EIHH-PGIQVELVPMSTQGDKILDTPLAKIGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ ++ G D AVHS KD+P + +GL+++ RED RD F+S+ +++++L +
Sbjct: 66 KELEQAMLEGRADIAVHSMKDVPVEFPEGLELNTICEREDPRDAFVSNRFKTIEELPQGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ + I
Sbjct: 126 VVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLEMPQRI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E P+ GQGA+ IE ++ ++L+ + H +T V ERA L+G C+
Sbjct: 186 ASFIEPEQSLPANGQGAVGIECRSDDITTKQLLAALEHTETRIRVLAERAMNRRLEGGCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
I FA G + G+V A DG G DA +G + A
Sbjct: 246 VPIGAFAQVSGEHITIRGLVGAIDGSEILRDQVQGLCADAEQLGVELA 293
>gi|190575960|ref|YP_001973805.1| porphobilinogen deaminase [Stenotrophomonas maltophilia K279a]
gi|229846305|sp|B2FI06|HEM3_STRMK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|190013882|emb|CAQ47520.1| putative porphobilinogen deaminase [Stenotrophomonas maltophilia
K279a]
Length = 303
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 151/267 (56%), Gaps = 3/267 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF
Sbjct: 4 VRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL L + +
Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDPPFALPAMLTRHDPADGFVSNLYASLDALPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + I
Sbjct: 122 RVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGERI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L + P+P QGA+ +E N + L ++ T V ERA L GSC
Sbjct: 182 VARLQPPQWLPAPAQGAVAVECDGGNARLMALFAPLDDAATRACVEAERAMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGK 271
+A A +G L+ G+V ASDG+
Sbjct: 242 VPVAAIAQWQGDDLHLQGLVGSASDGR 268
>gi|315634981|ref|ZP_07890262.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393]
gi|315476243|gb|EFU66994.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393]
Length = 346
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 157/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK +I TR SPLAL A ++ L ++ P +I ++ + TKGD I + L +IGG
Sbjct: 39 MFKKTLKIATRQSPLALWQANFVKARLQQLY--PDLSIELVTMVTKGDVILDSPLAKIGG 96
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+T ++L +
Sbjct: 97 KGLFVKELENALLNNEADIAVHSMKDVPMQFPEGLGLSVICKREDPRDAFVSNTYRTLAE 156
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 157 LPPGAIVGTSSLRRQCQLKALRPDLEIRSLRGNVGTRLSKLDNGDFDAIILASAGLIRLG 216
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + +E P+ GQGA+ IE N+ + ++L+ + +T V ERA L
Sbjct: 217 LADRITSFIEVEQSLPAAGQGAVGIECRTNDEQVKQLLAPLADVETTYCVLAERAMNNRL 276
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I G+A + S L +V + DG
Sbjct: 277 QGGCQVPIGGYAVLRESMLNLRALVGSVDG 306
>gi|269798482|ref|YP_003312382.1| porphobilinogen deaminase [Veillonella parvula DSM 2008]
gi|282849932|ref|ZP_06259315.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745]
gi|269095111|gb|ACZ25102.1| porphobilinogen deaminase [Veillonella parvula DSM 2008]
gi|282580369|gb|EFB85769.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745]
Length = 312
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 169/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT
Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E+ + +G+ID AVHS KDMPT+L +GL + A RE D +S ++L L +
Sbjct: 63 AELEEAMHAGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL E I
Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLEDQI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + +++ IN E T +V ER+FL +L+G C+
Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLDMLDPINDEATRYAVEGERSFLRQLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ L ++ + DGK +E +G +G++ A+ + K +
Sbjct: 243 VPMGVHGTINKGQLTLKAMIASLDGKTVYEGEISGPAKKGEILGKNLAKALYEEGGKRIV 302
Query: 306 N 306
+
Sbjct: 303 D 303
>gi|332360583|gb|EGJ38393.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1056]
Length = 306
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 168/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L +L
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCVF-VSLQGQDGQQL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|331018514|gb|EGH98570.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 313
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT + ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRLIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEAL 294
>gi|326796191|ref|YP_004314011.1| porphobilinogen deaminase [Marinomonas mediterranea MMB-1]
gi|326546955|gb|ADZ92175.1| Porphobilinogen deaminase [Marinomonas mediterranea MMB-1]
Length = 308
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 157/269 (58%), Gaps = 2/269 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A + L ++ P + ++ ++TKGD+I + L++IGGKG
Sbjct: 2 KDKIVIATRESKLALWQANTVKKQLETLY--PNLTVELLGMTTKGDQILDSPLSKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P KGL ++ RED D F+S+ SL +L
Sbjct: 60 LFVKELESALLDGRADIAVHSMKDVPMAFPKGLGLAVICEREDPSDAFVSNKYSSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GTSSLRR + + R D+ + RG + TRL KL+NN+ AI+LA AG+ RL+ E
Sbjct: 120 KGSVLGTSSLRRACQIQQHRPDLKIESLRGNVGTRLGKLDNNEYDAIILATAGLIRLELE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
IK L+ P+ GQGA+ IE N+ EL+ + H+DT+ V ERA L+G
Sbjct: 180 DRIKSRLSDTYCLPAGGQGAMGIECRDNDKDILELLAPLQHQDTYYRVTAERAVNKRLNG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C++ IA FA ++ G+V ++DG+
Sbjct: 240 GCQAPIACFATLSDGEIWLRGLVGSTDGQ 268
>gi|24211767|sp|Q9CK24|HEM3_PASMU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 164/296 (55%), Gaps = 3/296 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG
Sbjct: 2 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L +
Sbjct: 60 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL
Sbjct: 120 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L
Sbjct: 180 QQQRITSLIDVTQCLPAVGQGAVGIECR-QEAEIELLLAPLADPETTACVLAERAMNRHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ IAG+A + L+ +V DG DA +G A+ +
Sbjct: 239 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKL 294
>gi|212633296|ref|YP_002309821.1| porphobilinogen deaminase [Shewanella piezotolerans WP3]
gi|212554780|gb|ACJ27234.1| Porphobilinogen deaminase [Shewanella piezotolerans WP3]
Length = 294
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 153/270 (56%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
+ ++P+STKGD I + L ++GGKGLF +E+E ++ D AVHS KD+P +GL
Sbjct: 19 TVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLG 78
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
+ RED RD F+S+ S+ +L +V+GTSSLRR+ + R D+ + D RG + T
Sbjct: 79 LEVICEREDPRDAFVSNNFSSINELPQGAVVGTSSLRRQCQIRAARPDLQIKDLRGNVGT 138
Query: 157 RLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216
RL KL+ AI+LA AG+KRLK E+ I ++ ED P+ GQGA+ IE ++ + +
Sbjct: 139 RLAKLDAGNYDAIILAAAGLKRLKLEERITSFISAEDSLPANGQGAVGIECRTDDARVKA 198
Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276
L+ + H +T V ERA L+G C+ I +A G TL G+V DG E
Sbjct: 199 LLAPLEHLETRQRVIAERAMNTRLEGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQVIEA 258
Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+ +GN+ DA +G A+ + K + +
Sbjct: 259 ATSGNKNDAEQLGVALAEELLSKGAKTILD 288
>gi|15603677|ref|NP_246751.1| porphobilinogen deaminase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722234|gb|AAK03896.1| Pbg [Pasteurella multocida subsp. multocida str. Pm70]
Length = 312
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 164/296 (55%), Gaps = 3/296 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG
Sbjct: 5 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L +
Sbjct: 63 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL
Sbjct: 123 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L
Sbjct: 183 QQQRITSLIDVTQCLPAVGQGAVGIECR-QEAEIELLLAPLADPETTACVLAERAMNRHL 241
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ IAG+A + L+ +V DG DA +G A+ +
Sbjct: 242 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKL 297
>gi|317498182|ref|ZP_07956483.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894537|gb|EFV16718.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 312
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF
Sbjct: 3 YIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L +
Sbjct: 61 KEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E VI
Sbjct: 121 VIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC
Sbjct: 181 TQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN-V 304
+ Y + DG G C I + + A + I+ + +N +
Sbjct: 241 TPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGT-CPEI-LAQTAVKNIKKTAGRNRI 298
Query: 305 FNF 307
FN+
Sbjct: 299 FNW 301
>gi|313633107|gb|EFS00005.1| porphobilinogen deaminase [Listeria seeligeri FSL N1-067]
Length = 309
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 168/297 (56%), Gaps = 7/297 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T S DL
Sbjct: 60 LFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVGSFHDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
+VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R L
Sbjct: 120 TAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L+G C+ IAGFA + F G+V +DG R G + + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTGE--NPMTIGNQVAEAL 294
>gi|257485539|ref|ZP_05639580.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331011831|gb|EGH91887.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 313
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEAL 294
>gi|66043333|ref|YP_233174.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a]
gi|289677629|ref|ZP_06498519.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5]
gi|302187597|ref|ZP_07264270.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae 642]
gi|75504025|sp|Q500N6|HEM3_PSEU2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|63254040|gb|AAY35136.1| Porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a]
gi|330901069|gb|EGH32488.1| porphobilinogen deaminase [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330952274|gb|EGH52534.1| porphobilinogen deaminase [Pseudomonas syringae Cit 7]
gi|330970393|gb|EGH70459.1| porphobilinogen deaminase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 313
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEAL 294
>gi|289625848|ref|ZP_06458802.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646420|ref|ZP_06477763.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
2250]
gi|298484668|ref|ZP_07002771.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160808|gb|EFI01826.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320326724|gb|EFW82769.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331302|gb|EFW87245.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330867941|gb|EGH02650.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330881670|gb|EGH15819.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 313
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEAL 294
>gi|254490211|ref|ZP_05103401.1| porphobilinogen deaminase [Methylophaga thiooxidans DMS010]
gi|224464558|gb|EEF80817.1| porphobilinogen deaminase [Methylophaga thiooxydans DMS010]
Length = 309
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR SPLA+ A + SL+ +H P + ++ + T+GD I + L ++GG
Sbjct: 1 MSKRTVRIATRNSPLAVWQAEFVKDSLLALH--PDLTVELVKMKTQGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED D F+S+ Q++ D
Sbjct: 59 KGLFVKELEQGMLDGRADIAVHSMKDVPVEFPEGLHLPVICKREDPHDAFVSNHYQTIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ R D+ V+ RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPHGARLGTSSLRRECQARTHRPDLEVLPLRGNVNTRLRKLDEGQFDAIILAMAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IET +++ + L+ ++ T + ERA L
Sbjct: 179 FDDRIRSALTPEQSLPAIGQGALGIETRIDDDEMNALIAPLHCPQTAIVLTAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ IAG+A +G ++ G+V DG G DA +G A+ +
Sbjct: 239 SGGCQVPIAGYAMLEGDEVWLRGLVGRPDGTNTLYADVRGAAKDADKLGVQIAETL 294
>gi|303247619|ref|ZP_07333890.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ]
gi|302491099|gb|EFL50993.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ]
Length = 310
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 166/300 (55%), Gaps = 4/300 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A + L + H P + ++P+ TKGDRI + L ++GGKGLF +E
Sbjct: 7 IATRGSKLALWQANHVAARLKEAH--PGLAVDLLPIKTKGDRILDVPLAKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G D AVHS KD+P + GL + RED D+ +S L L + +
Sbjct: 65 IEEALLDGRADLAVHSMKDVPAEQPAGLVVGITPKREDPCDMLLSVAYDGLDALPEGAKV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRRKA L R D++++D RG ++TR+ KL + AI++A AG+ RL E
Sbjct: 125 GTSSLRRKAQLTALRPDLAIVDLRGNLDTRVGKLTDGLFDAIVVARAGLNRLGLSAPKSE 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L F P+ QGA+ IE ++ + ++ +H ++ D+V ERAFL L+G C+
Sbjct: 185 RLCPPRFLPAAAQGALGIEYRFDDRETAAMLAFFDHPESRDAVAAERAFLGRLEGGCQVP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IA A G+ + G+V D G+ F +V+ G R DA+ +G+ A + + + + +
Sbjct: 245 IAAHAVIDGNLISIDGLVADPDTGRTFRDVA-TGKRDDAVELGKKLADSVLAMGARAILD 303
>gi|70733286|ref|YP_263060.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5]
gi|123734674|sp|Q4K3X3|HEM3_PSEF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|68347585|gb|AAY95191.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5]
Length = 313
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L + H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLQEAH--PGLVVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ + D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLENQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPEGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT V ERA L
Sbjct: 179 FEDRISSSISVDDSLPAGGQGAVGIECRSADIEIHALLAPLHHADTASRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + G R A +G A +
Sbjct: 239 NGGCQVPIACYAVLEGEQIWLRGLVGEPSGGLLLSAEARGPRASAAELGVQVADAL 294
>gi|330976469|gb|EGH76521.1| porphobilinogen deaminase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 313
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEAL 294
>gi|322514003|ref|ZP_08067077.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976]
gi|322120153|gb|EFX92114.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976]
Length = 309
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 159/294 (54%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P + ++ + TKGD I + L +IGGKG
Sbjct: 2 KDILRIATRQSPLALWQANFVKKELE--KRFPELQVELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 60 LFVKELELALLEKRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYEAIILASAGLIRLGMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + +E P+ GQGA+ IET VN+ + + +NH T V ERA L G
Sbjct: 180 ERIRSFIAVEQSLPAAGQGAVGIETRVNDERVLNYLASLNHNPTACCVMAERAMNTRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I GFA G+ + +V A DG S + DA +G A+ +
Sbjct: 240 GCQVPIGGFATLNGNEITLNALVGALDGSTIIRASGVADIEDAEQLGISVAEQL 293
>gi|194017264|ref|ZP_03055876.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061]
gi|194011132|gb|EDW20702.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061]
Length = 311
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 172/286 (60%), Gaps = 4/286 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L
Sbjct: 60 FVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLRLHELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ K
Sbjct: 120 GAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSK 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++DG
Sbjct: 180 EVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
SC+ IAG+A + + G+V ++DG + +G+ +AI
Sbjct: 240 SCQVPIAGYATINERDEIELTGLVASADGHTIIRETVSGSDPEAIG 285
>gi|210621716|ref|ZP_03292765.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275]
gi|210154598|gb|EEA85604.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275]
Length = 299
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 164/292 (56%), Gaps = 3/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LAL L + K P + + TKGD+I + +L +IG KGLF
Sbjct: 3 IRVGTRGSNLALIQTNWAIDRLKE--KFPEVEFEVKIIKTKGDKILHLSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALH 124
+EIE +L+ GEID AVHS KDMP ++++GL+ +A RED RDV I S +L +
Sbjct: 61 KEIESQLLEGEIDLAVHSMKDMPAEVVEGLKFAAVPKREDPRDVIILREGLNSFDELPIG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT S RRK LLR R D++++ RG IETR++K+ + I+LA +G+ R E+
Sbjct: 121 ATIGTGSKRRKYQLLRKRPDLNIVPIRGNIETRISKIESENLDGIVLAASGVIRADLEEK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L ++ P+P QGA+ +E N+ + ++++ I E + + ER++LA +DGSC
Sbjct: 181 ITEFLPVDLMIPAPAQGALALEIRENDEELEKMIDAIKDEISQIQTDAERSYLAGIDGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + G L GI DG+ S G+R + +G + A+ +
Sbjct: 241 HIPMGAYCEVDGEKLTLTGIFGDEDGEKITVASLEGDRDNPKELGSNLAKLV 292
>gi|34101365|gb|AAQ57734.1| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472]
Length = 295
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 152/263 (57%), Gaps = 1/263 (0%)
Query: 35 PH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
PH + I+ ++T+GD+I ++TL++IGGKGLF +E+E+ L+ G D AVHS KD+P L
Sbjct: 16 PHLTVEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALMDGRADLAVHSLKDVPMTLPD 75
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
G ++A RED RD F+S+ Q L +L SV+GTSSLRR+A L ++V RG
Sbjct: 76 GFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLRREAQLRARFPQLAVKPLRGN 135
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
++TRL KL++ + AI+LA AG+KRL + I+ L + P+ GQGA+ IE +
Sbjct: 136 VQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELAPSESLPAAGQGALGIEIRADRAD 195
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L+ +NH DT ERA EL GSC+ + FA TL G+V DG +
Sbjct: 196 LSALLAPLNHPDTRACTAAERALAKELGGSCQVPLGAFATLADGTLTLGGLVAHPDGSVV 255
Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296
S +G A +GR A+ +
Sbjct: 256 LTASASGPADYADALGRAVAKKL 278
>gi|16079867|ref|NP_390693.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
168]
gi|238054381|sp|P16616|HEM3_BACSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|143037|gb|AAA22512.1| porphobilinogen deaminase [Bacillus subtilis]
gi|2635280|emb|CAB14775.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. subtilis str. 168]
Length = 314
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 166/302 (54%), Gaps = 11/302 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 3 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 61 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKK 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ K+
Sbjct: 121 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 181 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 240
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAAQ 294
C+ IAG++ G + G+V + DGKI + + GN RC A+ + A
Sbjct: 241 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKD 300
Query: 295 YI 296
I
Sbjct: 301 LI 302
>gi|71738146|ref|YP_272379.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558699|gb|AAZ37910.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 328
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 16 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 74 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 134 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 194 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 254 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEAL 309
>gi|157693217|ref|YP_001487679.1| porphobilinogen deaminase [Bacillus pumilus SAFR-032]
gi|167008811|sp|A8FFV2|HEM3_BACP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157681975|gb|ABV63119.1| hydroxymethylbilane synthase [Bacillus pumilus SAFR-032]
Length = 311
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 171/286 (59%), Gaps = 4/286 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L
Sbjct: 60 FVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLHLHELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ K
Sbjct: 120 GAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSK 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++DG
Sbjct: 180 EVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
SC+ IAG+A + + G+V ++DG + +G +AI
Sbjct: 240 SCQVPIAGYATMNERDEIELTGLVASADGHTIIRETVSGTDPEAIG 285
>gi|330957337|gb|EGH57597.1| porphobilinogen deaminase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 313
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPPGLGLFCICEREDPRDAFVSNTFDSLET 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSSISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G + A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDNVWLRGLVGDPSGSLLLHAEARAPQTAAQALGVEVAEAL 294
>gi|325294749|ref|YP_004281263.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065197|gb|ADY73204.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 311
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 175/305 (57%), Gaps = 6/305 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + + + K P + +I ++TKGD+I + L +IG KGLFT
Sbjct: 3 IRIGTRKSKLALWQSEWVKEQIE--KKFPEVEVELIKITTKGDKILDVPLAKIGDKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE ++ GE+D AVHS KD+P+KL +GL++ A+ RED RD +S +L L +
Sbjct: 61 KEIEDAMLKGEVDIAVHSLKDVPSKLPEGLKLIAFSDREDPRDALLSCGKYTLDTLPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E I
Sbjct: 121 VVGTSSLRRKAQLRILRPDLEIRDLRGNVDTRIRKLKEEQYDAIILAAAGVKRLGWENEI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSC 244
EIL+ + PS QG + IE ++P+ + +VK IN ++ + ERAFL ++G C
Sbjct: 181 DEILSSDKMIPSVSQGILGIEGREDDPEIERIVKEAINSRESEIAATVERAFLRTVEGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISN 301
+ + +A + ++ + +G+ +++ V + N +A +G A+ +
Sbjct: 241 QVPLGCYAVVVENRVHVRAFISDLNGRFYYKEEGVFKVENLEEADMVGTGVAERLLSAGG 300
Query: 302 KNVFN 306
K + +
Sbjct: 301 KKILD 305
>gi|71909286|ref|YP_286873.1| porphobilinogen deaminase [Dechloromonas aromatica RCB]
gi|123733070|sp|Q479S8|HEM3_DECAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71848907|gb|AAZ48403.1| Porphobilinogen deaminase [Dechloromonas aromatica RCB]
Length = 311
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 159/290 (54%), Gaps = 2/290 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R L ++ P +VI+ ++TKGD+I +R L EIGGKGLF +E
Sbjct: 9 IASRESRLAMWQAVHVRDRLSSLN--PGAEVVILGMTTKGDQILDRPLAEIGGKGLFIKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G+ AVHS KD+P + +G ++A RE+ RD F+S+ L DL +++
Sbjct: 67 LEVAMQEGKAHLAVHSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLDDLPAGAIV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+++L + + RG ++TRL KL+ + AI+LA AG+ RL E IK
Sbjct: 127 GTSSLRRESILRAKYPQLVIKSLRGNLDTRLKKLDAGEYDAIILAAAGLIRLGMENRIKS 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L E P+PGQGA+ IE ++V +N +T V ERAF L GSC+
Sbjct: 187 VLTAEQSLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRALGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ G+A L+ G V +DG+ GN D +G A +R
Sbjct: 247 LGGYAIIDNGQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELR 296
>gi|152997593|ref|YP_001342428.1| porphobilinogen deaminase [Marinomonas sp. MWYL1]
gi|150838517|gb|ABR72493.1| porphobilinogen deaminase [Marinomonas sp. MWYL1]
Length = 326
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 165/287 (57%), Gaps = 2/287 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A ++ L ++ P + ++ ++TKGD+I + L++IGGKG
Sbjct: 19 KDKIVIATRESQLALWQANNIKAQLESLY--PDMKVELLGMTTKGDQILDSPLSKIGGKG 76
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L G D AVHS KD+P +GL ++ RED D F+S+ +SL L
Sbjct: 77 LFVKELENALTEGLADIAVHSMKDVPMAFPEGLGLAVICEREDPHDAFVSNKVESLDQLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR L R D+ + D RG + TRL K+++ + AI+LA AG+ RL+
Sbjct: 137 SGAIVGTSSLRRSCQLRMKRPDLIIKDLRGNVNTRLKKMDDGEYDAIILATAGLVRLEML 196
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I++ + E P+ GQGA+ IE ++ + L+ + HE+T V ERA L+G
Sbjct: 197 DRIRQRIPAETSLPAGGQGAMGIECRSDDIQTINLLAPLQHEETAIRVTAERAVNERLNG 256
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C++ IA FA + TL+ G+V + DGK E G++ DA ++G
Sbjct: 257 GCQAPIACFAILENDTLWLRGLVGSPDGKTMIEGEIRGHKDDAKSLG 303
>gi|221310755|ref|ZP_03592602.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
168]
gi|221315080|ref|ZP_03596885.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319999|ref|ZP_03601293.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324281|ref|ZP_03605575.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
SMY]
Length = 313
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 166/302 (54%), Gaps = 11/302 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 60 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ K+
Sbjct: 120 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 239
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAAQ 294
C+ IAG++ G + G+V + DGKI + + GN RC A+ + A
Sbjct: 240 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKD 299
Query: 295 YI 296
I
Sbjct: 300 LI 301
>gi|167463591|ref|ZP_02328680.1| porphobilinogen deaminase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383221|ref|ZP_08057032.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321152490|gb|EFX45276.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 314
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 165/288 (57%), Gaps = 7/288 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L + + I + TKGDRI + TL+++GGKGLF
Sbjct: 6 VGTRQSALALTQTGQVVDELRKRCREAGLQVEFEIRKIVTKGDRILDVTLSKVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ +++GEID AVHS KDMP +L +GL I A R+D RD ++ SL +L +
Sbjct: 66 KEIEQAMLNGEIDLAVHSMKDMPFELPEGLVIGAIPERQDPRDCILTKGYVSLDELPQGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR + LL R D+++ RG I++RL KL + AI+LA AG+ R+ E+ I
Sbjct: 126 LVGTSSLRRGSQLLHARPDLTIRSVRGNIDSRLRKLESEGFDAIVLASAGLHRMGWEERI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L E P+ GQGA+CIE + +L+K+I H+DT +V ERAFL L+G C+
Sbjct: 186 SGYLPPEQCLPAVGQGALCIECRGGDAFVLDLLKLIQHDDTALAVRAERAFLGRLNGGCQ 245
Query: 246 SAIAGFAYC--KGST---LYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ FA G T L +V + DG + +R G R + + +
Sbjct: 246 VPLGAFASVDHSGGTEPLLTLTAMVGSPDGSKLLKETRQGTRPEELGL 293
>gi|145300736|ref|YP_001143577.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142853508|gb|ABO91829.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 315
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 166/297 (55%), Gaps = 4/297 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++
Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFSQIEA 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHTLLAPLEHAETRIRVLTERAMNRAL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I +A +G ++ G+V + DG ++ H+ R G D +G AQ +
Sbjct: 245 QGGCQVPIGAYALVQGDEVWLRGLVGSPDGSQVIHDEIR-GPLADGEALGHTLAQRL 300
>gi|219871198|ref|YP_002475573.1| porphobilinogen deaminase [Haemophilus parasuis SH0165]
gi|219691402|gb|ACL32625.1| porphobilinogen deaminase [Haemophilus parasuis SH0165]
Length = 309
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 164/294 (55%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 2 KEILRIATRQSPLALWQANFVKDALE--QRFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L G
Sbjct: 180 ERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I GFA G + +V + DG S GN +A +G + A+ +
Sbjct: 240 GCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEAL 293
>gi|308174513|ref|YP_003921218.1| porphobilinogen deaminase [Bacillus amyloliquefaciens DSM 7]
gi|307607377|emb|CBI43748.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens DSM 7]
gi|328554432|gb|AEB24924.1| porphobilinogen deaminase [Bacillus amyloliquefaciens TA208]
gi|328912836|gb|AEB64432.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens LL3]
Length = 313
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 163/292 (55%), Gaps = 11/292 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIQEIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L D+
Sbjct: 60 FVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
+IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ K+
Sbjct: 120 GGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++G
Sbjct: 180 DVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTKRTVAAERAFLHAMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIF-------HEVSRNGNRCDAI 286
C+ IAG+A + G+V + DGK H+ G RC A+
Sbjct: 240 GCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGHDPEEIGKRCAAM 291
>gi|167767183|ref|ZP_02439236.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1]
gi|167711158|gb|EDS21737.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1]
gi|291559492|emb|CBL38292.1| porphobilinogen deaminase [butyrate-producing bacterium SSC/2]
Length = 780
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 147/265 (55%), Gaps = 2/265 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF
Sbjct: 3 YIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L +
Sbjct: 61 KEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E VI
Sbjct: 121 VIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC
Sbjct: 181 TQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
+ Y + DG
Sbjct: 241 TPAGARCQKTDQGYELYAMFGNEDG 265
>gi|146305321|ref|YP_001185786.1| porphobilinogen deaminase [Pseudomonas mendocina ymp]
gi|145573522|gb|ABP83054.1| hydroxymethylbilane synthase [Pseudomonas mendocina ymp]
Length = 312
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 161/293 (54%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 3 REIRIATRKSALALWQAEYVKARLEQAH--PGLLVSLVPMVSRGDKLLDAPLAKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L
Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL +
Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFQD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ ++ ED P+ GQGA+ IE + + L+ ++H +T V ERA L+G
Sbjct: 181 RIRSSISAEDSLPAGGQGAVGIECRSADAEIHALLAPLHHRETALRVTAERALNKRLNGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IA +A + L+ G+V DG + DA +G A+ +
Sbjct: 241 CQVPIACYALLENDQLWLRGLVGQPDGGLLLRAEHRAASSDAEALGVRVAEAL 293
>gi|167855158|ref|ZP_02477929.1| porphobilinogen deaminase [Haemophilus parasuis 29755]
gi|167853703|gb|EDS24946.1| porphobilinogen deaminase [Haemophilus parasuis 29755]
Length = 309
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 164/294 (55%), Gaps = 2/294 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 2 KEILRIATRQSPLALWQANFVKDALE--QRFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L
Sbjct: 60 LFVKELELALLKNRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L G
Sbjct: 180 ERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I GFA G + +V + DG S GN +A +G + A+ +
Sbjct: 240 GCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEAL 293
>gi|89074445|ref|ZP_01160922.1| porphobilinogen deaminase [Photobacterium sp. SKA34]
gi|89049733|gb|EAR55283.1| porphobilinogen deaminase [Photobacterium sp. SKA34]
Length = 310
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 157/270 (58%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ + H P ++ ++P+ TKGD I + L ++GG
Sbjct: 1 MSNQLIRIATRKSPLAMWQAEFVKAEIEQAH--PGISVELVPMITKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L
Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLTALSDQATTTRVLCERAMNNHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I +A +G ++ +V DG
Sbjct: 239 QGGCQVPIGSYAELEGDQVWLRALVGEPDG 268
>gi|311069308|ref|YP_003974231.1| porphobilinogen deaminase [Bacillus atrophaeus 1942]
gi|310869825|gb|ADP33300.1| porphobilinogen deaminase [Bacillus atrophaeus 1942]
Length = 313
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 168/302 (55%), Gaps = 11/302 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L ++ P + I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIKKLEEID--PSYTFEIKEIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS Q L D+
Sbjct: 60 FVKEIEQALLNEDIDMAVHSMKDMPASLPEGLTIGCIPKREDPRDALISKRHQKLSDIKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
VIGTSSLRR A LL R D+++ RG I+TRL+KL AI+LA AG+ R+ K+
Sbjct: 120 GGVIGTSSLRRSAQLLVERPDLTIKWIRGNIDTRLHKLETEDYDAIILAAAGLSRMGWKD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLRLFSQFTDEYTKRTVLAERAFLNAMEG 239
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGK-IFHE-VSRN-----GNRCDAINIGRDAAQ 294
C+ IAG+A + G+V + DGK IF E V+ N G RC A+ + A
Sbjct: 240 GCQVPIAGYATINDQDEVQLTGLVASPDGKTIFKEKVAGNDPEEIGKRCAALMSDKGAKA 299
Query: 295 YI 296
I
Sbjct: 300 LI 301
>gi|42520403|ref|NP_966318.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410142|gb|AAS14252.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 292
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF +
Sbjct: 4 KIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L +
Sbjct: 62 EIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQAT 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 122 IATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC +
Sbjct: 179 EVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCFT 238
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+A A + +LAS GK + R DA +G DA ++
Sbjct: 239 PLAALAEYVSENMLHLRCMLAS-GKNIYFTERTSFIEDAEKMGMDAGLELK 288
>gi|99034622|ref|ZP_01314577.1| hypothetical protein Wendoof_01000608 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 302
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF +
Sbjct: 14 KIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L +
Sbjct: 72 EIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQAT 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 132 IATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 188
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC +
Sbjct: 189 EVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCFT 248
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+A A + +LAS GK + R DA +G DA ++
Sbjct: 249 PLAALAEYVSENMLHLRCMLAS-GKNIYFTERTSFIEDAEKMGMDAGLELK 298
>gi|327473567|gb|EGF18987.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK408]
Length = 306
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 167/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+ R L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLNRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + ++L+ + E T V ER LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLKGQDGQQL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|330501254|ref|YP_004378123.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01]
gi|328915540|gb|AEB56371.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01]
Length = 312
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 159/293 (54%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 3 REIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L
Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFAD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ ++ ED P+ GQGA+ IE + L+ ++H +T V ERA L+G
Sbjct: 181 RIRSSISAEDSLPAGGQGAVGIECRSADSDVHALLAPLHHRETALRVTAERALNKHLNGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IA +A + L+ G+V DG + DA +G A+ +
Sbjct: 241 CQVPIACYALLEDDQLWLRGLVGQPDGGLLLRAEERAASGDAEALGVRVAEAL 293
>gi|12655813|gb|AAK00605.1|AF221100_2 porphobilinogen deaminase [Selenomonas ruminantium subsp.
ruminantium]
Length = 313
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 171/307 (55%), Gaps = 3/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K IGTR S LAL A + L + + P + + ++TKGD+I + L +IGG
Sbjct: 1 MKKDTIVIGTRSSKLALWQAEYVKGRLEEEY--PGLKVELKLMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SG ID AVHS KDMPT+L +GL ++A R D D +S ++
Sbjct: 59 KGLFTKELEMDMLSGGIDLAVHSLKDMPTELPEGLTLAAITKRFDPGDAVVSPKFKTFAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRKA LL R D+++ D RG + TRL KL + AI+LA AG+KRL
Sbjct: 119 LPCGAKVGTSSLRRKAQLLHARPDLNICDLRGNVNTRLAKLESENFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E+L + P+ GQGA+ IET ++ +E++ +N E T ERAFL +
Sbjct: 179 FGERITEVLPRDMVLPAVGQGALAIETREDDADMREMLAFLNDEATVHCAKAERAFLGRV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A + V+AS DG+ + +G +A +G A+ +
Sbjct: 239 EGGCQVPVGVYAVPAANDEIQVEAVIASLDGQRLYRDKLSGKASEAEKLGVTLAEKLLAA 298
Query: 300 SNKNVFN 306
+ +
Sbjct: 299 GGQKILQ 305
>gi|52424331|ref|YP_087468.1| porphobilinogen deaminase [Mannheimia succiniciproducens MBEL55E]
gi|61213369|sp|Q65VX7|HEM3_MANSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52306383|gb|AAU36883.1| HemC protein [Mannheimia succiniciproducens MBEL55E]
Length = 310
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/268 (39%), Positives = 154/268 (57%), Gaps = 2/268 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A + L ++ P + ++ + TKGD I + L +IGGKG
Sbjct: 4 KNHLKIATRQSPLALWQANYVKDRLTALY--PDLQVELVTMVTKGDVILDTPLAKIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+ +SL +L
Sbjct: 62 LFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLAELP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 122 QGAIVGTSSLRRQCQLKSLRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLGMA 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + P+ GQGA+ IE V++ Q L+ + H++T V ERA L G
Sbjct: 182 ERIASFIETDISLPAAGQGAVGIECRVDDELVQSLLAPLAHQETTICVLAERAMNNRLQG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ I GFA K ++ +V A+DG
Sbjct: 242 GCQVPIGGFAQVKNGEVFLRALVGATDG 269
>gi|327489115|gb|EGF20910.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1058]
Length = 306
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 167/308 (54%), Gaps = 12/308 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFLQAGQTLANLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA A KG ++ DG+ VS G + A Q +R +
Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293
Query: 300 SNKNVFNF 307
++K
Sbjct: 294 ADKGAVGM 301
>gi|309775730|ref|ZP_07670726.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916493|gb|EFP62237.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53]
Length = 299
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 156/292 (53%), Gaps = 2/292 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LALA E R L + + P H + +STKGDR + L ++ KG+F
Sbjct: 3 IRMGTRGSALALAQCKEVRDRLQEAY--PQHTFELCVISTKGDRNQHVALDQMKDKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++L+ G ID AVHS KDMP+ L L + L RED RDV + TA +L+ L H+
Sbjct: 61 KEIEQQLLEGTIDLAVHSMKDMPSTLDARLCFTKTLLREDARDVLVLRTAPTLEQLPPHA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I T S RR LLR R+D+ ++ RG IETRL KL + I+LA AG+KRLK + I
Sbjct: 121 RIATGSKRRSYQLLRQRNDLEIVGIRGNIETRLRKLEEQQLDGIVLAAAGLKRLKLKPYI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ QGA+ IE +LV + + V ERAFL EL+G C
Sbjct: 181 TQTLKECIMVPAVAQGALAIEVCKEREDLIQLVNALCDPALDEEVCAERAFLQELNGGCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ + +T+ Y + DG ++ +G R A+ + AA +R
Sbjct: 241 TPLGARCILHDTTVELYAVYGNEDGTRLKQLHVSGAREQAVELAIQAAAVLR 292
>gi|222151551|ref|YP_002560707.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus
JCSC5402]
gi|254800255|sp|B9E743|HEM3_MACCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222120676|dbj|BAH18011.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus
JCSC5402]
Length = 307
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 169/290 (58%), Gaps = 5/290 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L H P I I + TKGD+I N L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDQLKRKH--PNLEIEIKEIVTKGDQIVNVQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L G ID A+HS KD+P+ L +GL + RED RD +I+ L +L S++
Sbjct: 64 IEQALYDGTIDFAIHSLKDVPSVLPEGLTLGCIPVREDARDAYIAKHHIPLHELKPGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIK 186
GTSSLRR A LL + + RG I+TRL KL + AI+LA AG+ R+ +K ++
Sbjct: 124 GTSSLRRGAQLLDQYPHLEIKWIRGNIDTRLAKLRDEDYDAIILAAAGLNRMGWDKSIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E LN E P+ GQGA+ IE ++ + L+K ++ E+T ER FL +DGSC+
Sbjct: 184 EYLNPELMLPAIGQGALGIECRSDDAEVLALLKSVHDEETELCTEAERTFLRLMDGSCQV 243
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG A G ++ F G++++ DGK ++V+ +G + I IG A+ +
Sbjct: 244 PIAGHATMVGESIEFTGLIMSPDGKEKYKVTHSGG--NPIEIGTQVAKAM 291
>gi|115378196|ref|ZP_01465368.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|310820650|ref|YP_003953008.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|115364784|gb|EAU63847.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|309393722|gb|ADO71181.1| Porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
Length = 314
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 152/265 (57%), Gaps = 2/265 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P ++ ++ ++T+GDR + L+ +GGKGLF
Sbjct: 5 VRIATRQSPLALWQARHVGALLTAQH--PGLSVSLVEMTTEGDRFLSAPLSSVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G D AVHS KDM + L +GL ++A RED RD F S T +L L +
Sbjct: 63 KEIEQALLDGRADIAVHSLKDMTSVLPEGLMLAAVPVREDPRDAFCSPTGLTLDRLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR +L WR D+ ++ RG ++TRL K + +LA+AG+KRL E+ I
Sbjct: 123 RVGTSSLRRSCILRSWRKDLEIVSLRGNVQTRLQKTRDLGLAGTVLAHAGLKRLGLEREI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ P+ GQG + I+ + + + L+ + T +V ERA LA+L+G CK
Sbjct: 183 SEVLSPSVSLPAVGQGVLAIQCRTEDAEVRALLGPLEDAVTRVAVTAERALLAKLEGGCK 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
+AG A + ++ G V DG
Sbjct: 243 VPLAGHATVEQGRVHLRGFVGRPDG 267
>gi|239905446|ref|YP_002952185.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1]
gi|239795310|dbj|BAH74299.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1]
Length = 311
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 164/300 (54%), Gaps = 4/300 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A L H P + ++P+ TKGD I + L ++GGKGLF +E
Sbjct: 7 IATRGSKLALWQANHVADRLRQTH--PGLAVDLLPIKTKGDIILDVPLAKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G D AVHS KD+P + GL + RED D +S SL L + +
Sbjct: 65 IEEALLDGRADLAVHSMKDVPAEQPAGLVVGIVPEREDPCDRLLSVAYDSLAALPQGATV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRRKA LL R D++++D RG ++TR+ KL + + AI++A AG+ RL+
Sbjct: 125 GTSSLRRKAQLLALRPDLAIVDLRGNLDTRVKKLLDGQFDAIIVAAAGLNRLELSAPKAV 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L +F P+ QGA+ IE +++P+ ++ +H ++ D+V ER FL L+G C+
Sbjct: 185 RLGPPEFLPAAAQGALGIEYRLDDPETAAMLAFFDHPESHDAVAAERGFLGHLEGGCQVP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IA A G ++ G+V + G+ F E + +G R A +G A+ + K V +
Sbjct: 245 IAAHAVIDGDMIHLEGLVADPETGQTFREAA-SGPRSQATALGVAVAEAVLARGAKAVLD 303
>gi|225630165|ref|YP_002726956.1| porphobilinogen deaminase [Wolbachia sp. wRi]
gi|254800263|sp|C0R2M3|HEM3_WOLWR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|225592146|gb|ACN95165.1| porphobilinogen deaminase [Wolbachia sp. wRi]
Length = 292
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 8/292 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF +
Sbjct: 4 KIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L +
Sbjct: 62 EIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQAT 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 122 IATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC +
Sbjct: 179 EVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCFT 238
Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+A A Y + LY ++ +DGK + R DA +G DA ++
Sbjct: 239 PLAALAEYVSENMLYLRCML--ADGKNIYFTERTSFIEDAEKMGMDAGLELK 288
>gi|319789486|ref|YP_004151119.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1]
gi|317113988|gb|ADU96478.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1]
Length = 311
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 175/305 (57%), Gaps = 6/305 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + ++ + K P + ++ ++TKGD+I + L +IG KGLFT
Sbjct: 3 IRIGTRKSKLALWQSEWVKAQIE--KKFPDVEVELVKITTKGDKILDVPLAKIGDKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ GE+D AVHS KD+P+KL KGL++ A+ RED RD +S +L+ L +
Sbjct: 61 KEIEEAMLRGEVDIAVHSLKDVPSKLPKGLKLIAFSDREDPRDALLSCGRYTLETLPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E+ I
Sbjct: 121 VVGTSSLRRKAQLRILRPDLQIKDLRGNVDTRIRKLKEGQYDAIILAAAGVKRLGWEEEI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSC 244
EIL+ E PS QG + IE + + + +V+ +N ++ + ERAFL ++G C
Sbjct: 181 DEILSPERMIPSVCQGILGIEGREGDSEVERIVREAVNSYESEVAATVERAFLRTVEGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISN 301
+ + +A + + +G+ +H+ V R + +A +IG A+ +
Sbjct: 241 QVPLGCYAVVNEDRILVRAFISDLNGRFYHKEEGVFRFKDLREADSIGVAVAERLLSAGG 300
Query: 302 KNVFN 306
K +
Sbjct: 301 KTILE 305
>gi|146280919|ref|YP_001171072.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501]
gi|145569124|gb|ABP78230.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501]
Length = 314
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 161/293 (54%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 5 REIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL L
Sbjct: 63 FVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALPP 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL +
Sbjct: 123 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L+G
Sbjct: 183 RIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IA +A +G L+ G+V DG + +A +G A+ +
Sbjct: 243 CQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEEL 295
>gi|121595211|ref|YP_987107.1| porphobilinogen deaminase [Acidovorax sp. JS42]
gi|120607291|gb|ABM43031.1| porphobilinogen deaminase [Acidovorax sp. JS42]
Length = 320
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 148/254 (58%), Gaps = 4/254 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A +S L + H + ++ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 23 IATRESQLALWQAEHVQSLL----RARGHAVALLGMTTRGDQILDRTLSKVGGKGLFVKE 78
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L +V+
Sbjct: 79 LEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGAVV 138
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 139 GTSSLRRQALLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRA 198
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC
Sbjct: 199 VFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCSMP 258
Query: 248 IAGFAYCKGSTLYF 261
+A G TL
Sbjct: 259 LAAHGQWDGDTLSL 272
>gi|315282478|ref|ZP_07870883.1| porphobilinogen deaminase [Listeria marthii FSL S4-120]
gi|313613876|gb|EFR87615.1| porphobilinogen deaminase [Listeria marthii FSL S4-120]
Length = 309
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 11/297 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDKAIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVSSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFIIKPIRGNIDTRLQKLHAENFDAIILAKAGLSRMG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P P+ GQGA+ IE ++ + ++++ ++HE+T V ER FL
Sbjct: 178 WLENTTLKLEDIPAELCLPAVGQGALAIECRESDQQIRDMLASVHHEETGVCVEAERVFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+L+G C+ IAGFA G ++F G+V +DG + E + G + +IG A+
Sbjct: 238 KKLNGGCEIPIAGFAAKTGDVIHFKGLVGNADGSVILESEQTGT--NPSDIGNQVAE 292
>gi|327479188|gb|AEA82498.1| porphobilinogen deaminase [Pseudomonas stutzeri DSM 4166]
Length = 312
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 161/293 (54%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 3 REIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL L
Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALPP 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL +
Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGE 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L+G
Sbjct: 181 RIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IA +A +G L+ G+V DG + +A +G A+ +
Sbjct: 241 CQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEEL 293
>gi|293604316|ref|ZP_06686723.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553]
gi|292817193|gb|EFF76267.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553]
Length = 315
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF +E
Sbjct: 9 IATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ L DL +V+
Sbjct: 67 LENALLDGRADLAVHSLKDVPVDLQAPFELCAILDRADPRDAFVSNRYAGLADLPAGAVV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG++RL E I+
Sbjct: 127 GTSSLRRESQIRARFPTLVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLQRLGLESRIRS 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+ D P+ GQGA+ IE + + + + T V ERA +L GSC+
Sbjct: 187 LLDPADSLPAAGQGALGIEIRNDRDDMRAWLAPLISAATTSCVQAERAVSRKLGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA G TL +V + DG R+G DA +G AAQ +
Sbjct: 247 LAAFAEISGDTLSLRALVASPDGVRMVHTRRSGPVADAQALGEAAAQEL 295
>gi|198284968|ref|YP_002221289.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666388|ref|YP_002427653.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|226740625|sp|B7JBH8|HEM3_ACIF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740626|sp|B5ERN6|HEM3_ACIF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|198249489|gb|ACH85082.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518601|gb|ACK79187.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 306
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 157/277 (56%), Gaps = 3/277 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLA+ A R++L+ +H P + II ++T GD + + L +GGKGLF
Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLH--PGMAVEIITMTTSGDVLLDAPLHALGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L +D AVHS KD+P GL+I A + RED+RD F+S+T L +
Sbjct: 63 KEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+A LL + V D RG + TRL +L+ AI+LA AG+KRL I
Sbjct: 123 RVGSSSLRRRAQLLERYPHLRVEDLRGNVATRLRRLDEGHYDAIILAAAGLKRLGLPDRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+I+ P+ GQGAI IE ++ + +EL+ + DT + V ER+ L G C+
Sbjct: 183 THLLDIDRSLPAVGQGAIGIEARSDDRRTRELLAPLADADTQNCVLAERSMNQVLGGDCR 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGN 281
+A A +G + G+V DG ++ H ++ +
Sbjct: 243 LPVAALARWQGPQMLLRGLVATPDGRRVLHAEAKGSD 279
>gi|313893126|ref|ZP_07826703.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442479|gb|EFR60894.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 305
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 158/275 (57%), Gaps = 2/275 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT
Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L +
Sbjct: 63 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I
Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+
Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ L ++ + DGK +E +G
Sbjct: 243 VPMGVHGTIDKGQLTLKAMIASLDGKTVYEGEISG 277
>gi|95931480|ref|ZP_01314180.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684]
gi|95132465|gb|EAT14164.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684]
Length = 313
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 171/292 (58%), Gaps = 8/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL A+ L D + I+ + T+GD++ + ++ +IG KG+FT
Sbjct: 5 IKIGTRRSKLALWQAYYVEQLLQDAG----MDTEIVEIDTRGDQVLDVSIAKIGSKGVFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124
EE+E +L SG+ID AVHSAKDM ++L +G +I A+ RE + DV +S L D +
Sbjct: 61 EELEDQLRSGDIDIAVHSAKDMQSELPEGFEIIAFTIREKVNDVVVSRDKSIRLGDTSRP 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG+SS+RR+A+L + +++I+ RG ++TR+ K+++ + AILLAYAG+ R++ +
Sbjct: 121 LTIGSSSVRRRAILKAYYPHLNIIEMRGNLQTRIGKMDDGQCDAILLAYAGVNRMEYNDL 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN-NPKAQELV-KVINHEDTWDSVNCERAFLAELDG 242
I E L +E F P GQG++ IE+ +N + K +E + K +NH DT + ERAFL L G
Sbjct: 181 IVETLPLEQFIPPVGQGSVAIESAINLDAKKRETIRKAVNHPDTEFRLLAERAFLKTLKG 240
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C A +G L G +++ DG+ + G R DA +G A
Sbjct: 241 GCSIPAFCMAELEGDDQLKVTGGMISLDGQTLIKNVLTGARSDAEQLGDQMA 292
>gi|332139557|ref|YP_004425295.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549579|gb|AEA96297.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 312
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 165/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGKGL
Sbjct: 8 RTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L
Sbjct: 66 FIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPE 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RLK +
Sbjct: 126 GAIVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLKMQS 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ IE ++ + L++ +NH DT V ERA L+G
Sbjct: 186 RIRMALPADISLPAVGQGAVGIECRNDDEELIALLQALNHADTHTRVTAERAMNERLEGG 245
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I FA L G+V DG S +R A ++G + A+ +
Sbjct: 246 CQVPIGSFATLDNDVLTLTGMVGKPDGSELLFASATASREKAKDMGIEVAEAL 298
>gi|332284596|ref|YP_004416507.1| porphobilinogen deaminase [Pusillimonas sp. T7-7]
gi|330428549|gb|AEC19883.1| porphobilinogen deaminase [Pusillimonas sp. T7-7]
Length = 315
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 160/291 (54%), Gaps = 4/291 (1%)
Query: 1 MEKKPFR--IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + P + I TR S LAL A R L ++ P + ++ ++T+GD+I +R+L+++
Sbjct: 1 MSEAPAKLVIATRASRLALWQAEHVRDRLQTLY--PQCQVSLLTMTTRGDQILDRSLSKV 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E L+ G D AVHS KD+P + +S L R+D RD F+S+ SL
Sbjct: 59 GGKGLFVKELETALLDGRADLAVHSLKDVPVDMQSPFALSVILERDDPRDAFVSNDYSSL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL SV+GTSSLRR+A + + + V RG ++TRL KL+ AI+LA AG++R
Sbjct: 119 DDLPAGSVVGTSSLRREAQIRQRYPQLQVQPLRGNLDTRLGKLDRGDYAAIILASAGLRR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L E I+ LN E P+ GQGA+ IE + Q + ++ DT ERA
Sbjct: 179 LGLEARIRSHLNPEQSLPAAGQGALGIEILESRSDMQTWLAPLSDPDTTACALAERAVSR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
L GSC+ +A FA G+TL G+V DG +G+ A +G
Sbjct: 239 VLGGSCQVPLAAFAQRDGNTLMVRGLVAEPDGSRIIRAQVSGDVSQAEELG 289
>gi|226326699|ref|ZP_03802217.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198]
gi|225204920|gb|EEG87274.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198]
Length = 291
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 153/271 (56%), Gaps = 2/271 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQLTH--PGLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+ +L++
Sbjct: 59 KGLFVKELELALLESRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYNALEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLKAQRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ I +N+ + + L +NH T V +RA L
Sbjct: 179 LNERIRTPLSAEQSLPAVGQGAVGIGRQLNDNETRHLFDALNHSPTAILVKIKRAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
+G C+ I +A + + F +V + DG+
Sbjct: 239 EGGCQVPIGTYAIWQDDKILFGALVGSPDGE 269
>gi|323699104|ref|ZP_08111016.1| porphobilinogen deaminase [Desulfovibrio sp. ND132]
gi|323459036|gb|EGB14901.1| porphobilinogen deaminase [Desulfovibrio desulfuricans ND132]
Length = 310
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A + L H P ++ ++ + TKGD+I + L ++GGKGL
Sbjct: 2 KKLTIATRGSALALWQANHIKDRLEAEH--PGLSVDLLKIKTKGDKILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G AVHS KD+PT+L GL++ RE+ D +S L L
Sbjct: 60 FVKEIEEALLDGRAQLAVHSMKDVPTELPDGLEVGIIPEREEATDSLLSVKYDGLAGLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR++ L R D+ + RG ++TRLNKL N + AI+LA AG+KRL
Sbjct: 120 GAVVGTSSLRRQSQLCALRPDLKIETLRGNLDTRLNKLLNGEYDAIVLATAGLKRLAMSA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+EIL+ +F P+ QGA+ IE + + ++L+ ++H T V ER FL LDG
Sbjct: 180 PKQEILSPPEFLPAVAQGALGIEFRSADTEVRDLLAFLDHAPTKHQVLAERGFLTGLDGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA ++ +G TL G V DG GN A ++G A + K
Sbjct: 240 CQVPIAAWSVIEGETLRLTGYVAEVDGSTPIRRMVEGNVAHAWDLGMILAGQVLEAGGKA 299
Query: 304 VFN 306
+ +
Sbjct: 300 ILD 302
>gi|330890195|gb|EGH22856.1| porphobilinogen deaminase [Pseudomonas syringae pv. mori str.
301020]
Length = 313
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HED V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDPAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEAL 294
>gi|206603978|gb|EDZ40458.1| Porphobilinogen deaminase [Leptospirillum sp. Group II '5-way CG']
Length = 314
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 169/310 (54%), Gaps = 7/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P +IG+R S LAL A S + V I P +VI T GD I +R L+E+GG
Sbjct: 1 MSLMPLKIGSRGSELALWQARHVASMIESVSGILPEIVVI---KTTGDIILDRQLSEVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K
Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLKREDPRDVFLSPHYPDIKS 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR A + +RSD+ I RG + TR+ K+ + AI+LA AG+ RL
Sbjct: 118 LPHKARVGTSSLRRLAQIREFRSDLEFIPLRGNVGTRIRKMEDGVVEAIILAGAGLLRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++E ++ + P+ GQGA+ +E ++ L++ ++ E T SV ER L L
Sbjct: 178 HANRVREWISPQVLLPAIGQGALGLEIRTDDETTGTLIRSLSDESTHLSVAAERGVLQSL 237
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDG--KIFHEVSRNGNRCD-AINIGRDAAQYI 296
+G C+ IA +A + K TL G VL G +I +R+ D A +G D +
Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIATIDEAYQMGMDLGNRL 297
Query: 297 RFISNKNVFN 306
+ + N
Sbjct: 298 LADGAEEILN 307
>gi|162139476|ref|YP_855002.2| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 315
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + +
Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 245 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRL 300
>gi|117559297|gb|ABK36245.1| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 330
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 79
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + +
Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 139
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 259
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 260 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRL 315
>gi|83643194|ref|YP_431629.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396]
gi|123753698|sp|Q2SQ70|HEM3_HAHCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83631237|gb|ABC27204.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396]
Length = 311
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 153/270 (56%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ I TR S LAL A + L +H P + ++ L+TKGD I + L ++GG
Sbjct: 1 MPKQHLVIATRQSALALWQAEHVKQRLEALH--PGLTVELLGLTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + GL + A L RE D F+S+ SL +
Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPPGLGLGAILERETPMDAFVSNQYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ ++ RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPEGAVVGTSSLRRQCQLSERRPDLKILSLRGNVNTRLAKLDAGDFDAIILAASGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+E L E P+ GQGA+ IE +++P+A L+ + +T V+ ERA L
Sbjct: 179 FSGRIREELTPEVSLPAVGQGALGIECRLDDPEAMALIAQLQDAETTARVSAERAMNHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ IAG+A G + G+V + DG
Sbjct: 239 QGGCQVPIAGYAEITGDQMRLRGLVGSPDG 268
>gi|167630035|ref|YP_001680534.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1]
gi|167592775|gb|ABZ84523.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1]
Length = 315
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 156/287 (54%), Gaps = 2/287 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL L +++ P + + TKGD+I + L +IG KG
Sbjct: 5 QRPVVIGTRDSALALWQTHWVLERLKELY--PEQAFEVKHIKTKGDKILDVALAKIGDKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E +++GEID AVHS KD+PT L +G I A RED RD+ IS L++L
Sbjct: 63 LFTKELEVAMLNGEIDMAVHSMKDLPTLLPEGCAIGAICVREDCRDILISRNGGGLEELP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRKA + + R D+ ++D RG ++TR+ K+ ++LA AG+KRL
Sbjct: 123 RGAKVGTASLRRKAQIWKVRPDLELVDIRGNLQTRMRKMEEQNLDGLILAAAGVKRLGWA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E + ++ P+ GQG++ IE + LV +NH ++ V ERA L L+G
Sbjct: 183 EKITEYIPVDMCLPAVGQGSVGIEIREGDEAIGRLVAALNHAESALCVRAERALLRTLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C+ I G L G+V + DG+ G+ D G
Sbjct: 243 GCQVPIGSLGRLSGGKLIVDGVVASLDGRTICRDRVEGDPADPEEAG 289
>gi|114778663|ref|ZP_01453479.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1]
gi|114551128|gb|EAU53689.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1]
Length = 333
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 153/284 (53%), Gaps = 3/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L + P ++ + T+GD+I + L ++GGKGLFT
Sbjct: 27 IRIATRRSPLALWQAEYIAAELEKMS--PDVTTELVKIVTRGDKILDVPLAKVGGKGLFT 84
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ L G D AVHS KD+PT+L +G I A R D RD + T L L +
Sbjct: 85 KEIDEALFDGRADVAVHSMKDVPTQLPEGTSIRALPERADPRDAAATITGGGLDTLPEGA 144
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR A L + RG I+TRL+K+ + AI+LA AGI+R+ E +
Sbjct: 145 TIGTSSLRRVAQLQARFPTFKFVSVRGNIQTRLSKM-GQEVDAIILAAAGIRRMGMEDQM 203
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E P+ QG + I+T ++ LV +NH DT D ERAFLA L+G C+
Sbjct: 204 HEFIDTEMLLPAVAQGTLGIQTRNDDDVVNALVDRLNHADTVDRTRAERAFLARLEGGCQ 263
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
IA FA G L G+V + DGKI G R D +G
Sbjct: 264 VPIAAFATLDGDQLTLKGLVGSVDGKIVIRREIVGLRRDGAAMG 307
>gi|325688053|gb|EGD30072.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK72]
Length = 306
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 171/309 (55%), Gaps = 14/309 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L +L
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCVLGAISQREDVRDCLIFRQAGQTLANLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 QGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + ++L+ + E T V+ ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVSVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRF 298
++ C IA A ++ DG+ IF VS G + A Q +R
Sbjct: 240 MNADCSFPIAALARKNDQDYQLEAMLAKEDGQCIF--VSLQGQDGQEL-----AEQAVRQ 292
Query: 299 ISNKNVFNF 307
+++K
Sbjct: 293 LADKGAVGM 301
>gi|77359075|ref|YP_338650.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis TAC125]
gi|76873986|emb|CAI85207.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Pseudoalteromonas haloplanktis TAC125]
Length = 312
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 165/291 (56%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A ++ L H P + ++P+ST+GD I + L +IGGKGLF
Sbjct: 8 VRIATRKSALALWQAEFVKAQLEHYH--PGILVELVPMSTQGDIILDTPLAKIGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ ++ G D AVHS KDMP + +GL + RED RD F+S+ ++ +L +
Sbjct: 66 KELEQAMLEGLADMAVHSMKDMPVEFPEGLTLHTICEREDPRDAFVSNNFANIDELPQGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ RL+ + I
Sbjct: 126 IVGTSSLRRQCQIRASRPDLKIHDLRGNVNTRLAKLDSGQYDAIILAAAGLIRLEMKDRI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQGA+ IE ++ + L+ + H +T VN ERA L+G C+
Sbjct: 186 RAYIEPEVSLPANGQGAVGIECRTDDEAIKALLAPLEHSETRIRVNAERAMNRHLEGGCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A G ++ G+V A DG +G+ DA +G + A+ +
Sbjct: 246 VPIGAYALVNGDQVHLRGLVGAIDGSEILRDEVSGHVNDAEKLGVELAKML 296
>gi|71083016|ref|YP_265735.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062129|gb|AAZ21132.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 307
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 178/304 (58%), Gaps = 5/304 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIG 59
M+ + IG+R S LAL +A + R ++ K ++I + TKGD++ ++ L+E+G
Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK
Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L
Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L
Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C++A+ FA +G+ + + + DG + + + S + N+ + + I + + ++
Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVNKAEELGI--EMGKTLK 298
Query: 298 FISN 301
+SN
Sbjct: 299 KMSN 302
>gi|332534414|ref|ZP_08410254.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505]
gi|332036148|gb|EGI72623.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505]
Length = 312
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 163/293 (55%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR S LAL A ++ L H + ++P+ST+GD I + L +IGGKGL
Sbjct: 6 KLVRIATRKSALALWQAEFVKAELERFHA--DVRVELVPMSTQGDIILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L L
Sbjct: 64 FVKELEQAMLDGRADIAVHSMKDVPVEFPQGLALHTICEREDPRDAFVSNNFANLSALPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ RL+ E
Sbjct: 124 GAIVGTSSLRRQCQIKALRPDLDIRDLRGNVNTRLGKLDDGQYDAIILAAAGLIRLEMES 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + E P+ GQGA+ IE +++ + L+ + H T VN ER+ L+G
Sbjct: 184 RIADYIEPEVSLPANGQGAVGIECRIDDEVTKALLAPLEHTQTRIRVNAERSMNRYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I +A G ++ G+V A DG G+ DA IG + A+ +
Sbjct: 244 CQVPIGAYALVDGEQVHLRGLVGAVDGSEILRDEVTGHVNDAEKIGIELAKKL 296
>gi|321312347|ref|YP_004204634.1| porphobilinogen deaminase [Bacillus subtilis BSn5]
gi|320018621|gb|ADV93607.1| porphobilinogen deaminase [Bacillus subtilis BSn5]
Length = 313
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 165/302 (54%), Gaps = 11/302 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 60 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ K+
Sbjct: 120 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 239
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAAQ 294
C+ IAG++ G + +V + DGKI + + GN RC A+ + A
Sbjct: 240 GCQVPIAGYSVLNGQDEIEMTALVASPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKD 299
Query: 295 YI 296
I
Sbjct: 300 LI 301
>gi|217964297|ref|YP_002349975.1| porphobilinogen deaminase [Listeria monocytogenes HCC23]
gi|290893957|ref|ZP_06556933.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071]
gi|254800254|sp|B8DHJ2|HEM3_LISMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|217333567|gb|ACK39361.1| porphobilinogen deaminase [Listeria monocytogenes HCC23]
gi|290556495|gb|EFD90033.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071]
gi|307571137|emb|CAR84316.1| hemC [Listeria monocytogenes L99]
Length = 309
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 163/283 (57%), Gaps = 9/283 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L
Sbjct: 60 LFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVNALDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 HGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 178 WLENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+L+G C+ IAGFA ++F G+V +DG I E + G
Sbjct: 238 KKLNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG 280
>gi|157825828|ref|YP_001493548.1| porphobilinogen deaminase [Rickettsia akari str. Hartford]
gi|166217781|sp|A8GNR5|HEM3_RICAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157799786|gb|ABV75040.1| porphobilinogen deaminase [Rickettsia akari str. Hartford]
Length = 301
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 149/249 (59%), Gaps = 5/249 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLAL +T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRNSPLAL---IQTNLVIQQIKQFFPDINCAIVPIITSGDLIQNKPLYDIGGKALF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L+ +ID AVHS KD+P ++ + L ISA L RED RDVF+ +S+K+L H
Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDVPGRIPEELVISAVLEREDPRDVFVCLNYKSIKELPQH 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183
SVIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAYAG+KRL
Sbjct: 122 SVIGSSAVRRKAFIQKIRPDLKVTIFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFNP 181
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ P GQG I +E N+ E+ INH T + + ERAFL LD +
Sbjct: 182 EYCHLIEYSHMLPCVGQGVIAVEIRQNDNSMLEICNQINHLPTCELIKPERAFLEYLDAN 241
Query: 244 CKSAIAGFA 252
C++ I ++
Sbjct: 242 CRTPIGTYS 250
>gi|303257759|ref|ZP_07343771.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47]
gi|331001196|ref|ZP_08324823.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT
11859]
gi|302859729|gb|EFL82808.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47]
gi|329569128|gb|EGG50920.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT
11859]
Length = 310
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 157/259 (60%), Gaps = 4/259 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLAL A +S L + K P ++ ++ L+TKGD+I + TL++IGGKGLF +E
Sbjct: 9 IATRESPLALWQAKYVQSCLKE--KFPELDVQLLGLTTKGDKILDVTLSKIGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E ++ G+ AVHS KD+P LL+ ++A + RED RD +SH SL+++ SV+
Sbjct: 67 LEAAMLEGKAQIAVHSLKDVPMDLLEPFTLAAVMVREDPRDAVVSHKYASLEEMPAGSVV 126
Query: 128 GTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
GTSSLRR+ L++R R + V RG + TRL+KL+N + +++A AG+KRL I+
Sbjct: 127 GTSSLRRE-LMVRSRFPHLKVEMIRGNVGTRLSKLDNGQYDTLVMAVAGLKRLGLSDRIR 185
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
I+ E P+PGQGAI IE N+ Q+ V+ +N EDT ERA L GSC+
Sbjct: 186 SIIPPEVSLPAPGQGAIGIEAVGNDEMTQKYVEALNDEDTRLCTQAERAVSRALGGSCQV 245
Query: 247 AIAGFAYCKGSTLYFYGIV 265
+A +A ++ +V
Sbjct: 246 PLAAYATIDDGQMFLRALV 264
>gi|119947244|ref|YP_944924.1| porphobilinogen deaminase [Psychromonas ingrahamii 37]
gi|166217780|sp|A1T0R0|HEM3_PSYIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119865848|gb|ABM05325.1| porphobilinogen deaminase [Psychromonas ingrahamii 37]
Length = 310
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 167/297 (56%), Gaps = 4/297 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIG 59
M + RI TR SPLA+ A +S L+ H P+ IV ++P+ TKGD I + L ++G
Sbjct: 1 MTAQKIRIATRHSPLAMWQANFIKSELLKYH---PNLIVELLPMKTKGDIILDTPLAKVG 57
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL ++ RED D F+S+ + L
Sbjct: 58 GKGLFVKELEVAILEGRADIAVHSIKDVPVDFPEGLGLTTICKREDPHDAFVSNHYKQLD 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++GT SLRR+ +L R DI + + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 118 ELPEGAIVGTCSLRRQCQILALRPDIIIKNLRGNVNTRLRKLDEGEYDAIILAAAGLMRL 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + I ++ E P+ GQGA+ IE +++ + L+K + +T + ERA +
Sbjct: 178 EMQHRITSLIAPEVSLPAVGQGAVGIECRLDDEQTITLLKPLEDPETRIRITAERAMNLK 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C+ I FA + L+ G+V + DGK G++ DA +G A+ +
Sbjct: 238 LQGGCQVPIGSFAILENEQLFLRGLVGSVDGKQIIRKEITGHQNDAQQLGITLAEQL 294
>gi|190570895|ref|YP_001975253.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019411|ref|ZP_03335217.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357167|emb|CAQ54582.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994833|gb|EEB55475.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 292
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 161/288 (55%), Gaps = 8/288 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LAL A E + L++ P ++ II + T GD+ N TL EIGGKGLF
Sbjct: 4 KIGTRGSDLALIQALEAKQRLLE--SFPNLSVEIIKIKTSGDKYANVTLAEIGGKGLFLR 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +L+ ID AVHS KD+P K L I L R DVFISH +SLK L +
Sbjct: 62 EIEAELLKNNIDMAVHSLKDVPAFFSKDLTIPCVLERLSPCDVFISHKYKSLKTLPQQAT 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TSS+RRK LL R D++V+ RG + TR L N ++LA AG+ RLKK +I
Sbjct: 122 IATSSIRRKVQLLNLRPDLNVVPLRGNVTTR---LQNQNFDGMILAEAGLIRLKKYHLIT 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L + + GQG ICI+ N+ K +L++ IN+ ++ ER+F+ ++GSC +
Sbjct: 179 EVLPPKVMLSAVGQGTICIQCRKNDIKVIDLLEKINNNMSFIRAKSERSFMKTVNGSCFT 238
Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+A A Y + L+ Y ++ + ++ + R DA +G DA
Sbjct: 239 PLAALAEYVSENMLHLYCML--AGERVIYFTERTSFVEDAEKMGMDAG 284
>gi|332995105|gb|AEF05160.1| porphobilinogen deaminase [Alteromonas sp. SN2]
Length = 311
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 165/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L++ H + ++P+ST+GDRI + L +IGGKGL
Sbjct: 7 RTIRIATRKSALALWQAEYVKAKLLEHHD--GIAVELVPMSTQGDRILDTPLAKIGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ +L L
Sbjct: 65 FIKELEVAMLEGRADIAVHSMKDLPVEFPEGFGLHAICERENPFDAFVSNHFDNLDALPE 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+ + + R D+ + D RG + TRL KL+ + AI+LA AG+ RL E+
Sbjct: 125 GAVVGTSSLRRQCQIRKHRPDLKIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLGMEE 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK L P+ GQGA+ IE ++ + L++ +NH +T V+ ERA L+G
Sbjct: 185 RIKTGLPASVSLPAVGQGAVGIECRNDDAELIALLQALNHGETQTRVSAERAMNERLEGG 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I FA G ++ G+V DG S G +A +IG + A+ +
Sbjct: 245 CQVPIGSFATLDGDSITLTGMVGQPDGSTLLFASATGPTKNAKSIGVEVAEAL 297
>gi|251793296|ref|YP_003008024.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700]
gi|247534691|gb|ACS97937.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700]
Length = 308
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 154/270 (57%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P + ++P+ TKGD I + L +IGG
Sbjct: 1 MLEKTLKIATRQSPLALWQANYVKDCLQQLY--PDLIVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++ +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTFDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQSAVVGTSSLRRQCQLKALRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + +E P+ GQGA+ IE ++ + ++L+ + +T V ERA L
Sbjct: 179 LADRIASFIEVEQSLPAAGQGAVGIECRTDDVQVKQLLAPLADAETTCCVLAERAMNNHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I G+A + LY +V DG
Sbjct: 239 QGGCQVPIGGYAVLQQGQLYLRALVGNVDG 268
>gi|222111550|ref|YP_002553814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY]
gi|221730994|gb|ACM33814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY]
Length = 310
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 147/254 (57%), Gaps = 4/254 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A +S L + H + ++ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 13 IATRESQLALWQAEHVQSLL----RARGHAVALLGMTTRGDQILDRTLSKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L +V+
Sbjct: 69 LEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 129 GTSSLRRQVLLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRA 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC
Sbjct: 189 VFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCSMP 248
Query: 248 IAGFAYCKGSTLYF 261
+A G TL
Sbjct: 249 LAAHGQWDGDTLSL 262
>gi|91762559|ref|ZP_01264524.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718361|gb|EAS85011.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 307
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 161/271 (59%), Gaps = 1/271 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIG 59
M+ + IG+R S LAL +A + R ++ K ++I + TKGD++ ++ L+E+G
Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK
Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L
Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L
Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+G C++A+ FA +G+ + + + DG
Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDG 271
>gi|154686951|ref|YP_001422112.1| porphobilinogen deaminase [Bacillus amyloliquefaciens FZB42]
gi|166201493|sp|A7Z7A5|HEM3_BACA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|154352802|gb|ABS74881.1| HemC [Bacillus amyloliquefaciens FZB42]
Length = 313
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 162/292 (55%), Gaps = 11/292 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIREIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L +
Sbjct: 60 FVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
+IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ K+
Sbjct: 120 GGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++G
Sbjct: 180 DVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIF-------HEVSRNGNRCDAI 286
C+ IAG+A + G+V + DGK H+ G RC A+
Sbjct: 240 GCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGHDPEEIGKRCAAM 291
>gi|302038053|ref|YP_003798375.1| porphobilinogen deaminase [Candidatus Nitrospira defluvii]
gi|300606117|emb|CBK42450.1| Porphobilinogen deaminase [Candidatus Nitrospira defluvii]
Length = 310
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 160/289 (55%), Gaps = 4/289 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +GTR S LA+ + ++ L ++ P I + + T GD+I + L +IGG
Sbjct: 1 MNRSTLILGTRGSKLAVHQSQWVQARLQEL--APGLTISLQRIQTSGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE L+S EID AVHS KD+PT L +GL I PRED RD I+ L
Sbjct: 59 KGLFVKEIEDALLSKEIDLAVHSMKDVPTALPEGLDILCVPPREDPRDALITRDGCRLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR+A LL +R D ++ RG ++TRL KL + AI+LA AG++RL
Sbjct: 119 LKPGAKIGTSSLRRQAQLLHYRPDFTIEMLRGNLDTRLRKLREGQFDAIVLAAAGLRRLA 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L + P+ QGA+ IE ++ +EL+ H T +V ERA L L
Sbjct: 179 WDAEITEYLPVHLSLPAIAQGALGIEARSDDTFVRELLSRFEHRPTRITVTAERALLHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAIN 287
+G C+ IA A +G L G+V + DG+ I H++ + A+
Sbjct: 239 EGGCQVPIAAHAALEGDRLTVDGLVASVDGRRVIRHQIQGPASEAQALG 287
>gi|224476761|ref|YP_002634367.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254800259|sp|B9DNE1|HEM3_STACT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222421368|emb|CAL28182.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 308
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 176/301 (58%), Gaps = 6/301 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSRQFIERLKKVE--PDLDIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+++L EID A+HS KD+P++L GL + RE D FIS L DL S++
Sbjct: 64 IQQELFDHEIDMAIHSLKDVPSELPDGLTLGCIPDREIPLDAFISKNHVQLADLPDGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLSKLETEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ E P+ GQGA+ IE ++ + +L+ +++++ + V ER FL E++GSC+
Sbjct: 184 EYLDPELLVPAIGQGALGIECRSDDTELLDLLSKVHNQEVAECVTAERTFLKEMNGSCQV 243
Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I G+A + L F G++++ DGK E + GN D + +G++ + ++ K +
Sbjct: 244 PIGGYATIDDNGRLTFTGLIMSPDGKQRFEQTATGN--DPVELGKEVSDILKEQGAKEII 301
Query: 306 N 306
+
Sbjct: 302 D 302
>gi|317129820|ref|YP_004096102.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522]
gi|315474768|gb|ADU31371.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522]
Length = 310
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
Query: 8 IGTRCSPLALAHA---FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LA+ E SL ++ IV TKGD+I + TL+++GGKGLF
Sbjct: 6 VGSRKSNLAMTQTKWVIEQLKSLGLNYEFEIKEIV-----TKGDKILDVTLSKVGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK + GEID AVHS KD+P ++ G+ + A R D RD FIS++ + L DL
Sbjct: 61 VKEIEKAMYDGEIDIAVHSMKDLPAEIADGMAVGAIPKRVDPRDAFISNSGKGLMDLPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183
S++GTSSLRR A +L R D+ + RG I+TRL K AI+LA AGI+R+
Sbjct: 121 SIVGTSSLRRSAQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGIERVGWTSD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ E L E P+ GQGA+ IE ++ + L+ IN DT +V ERAFL ++G
Sbjct: 181 IVTEFLEPEVCLPAVGQGALGIECRADDKEVLALLAKINDSDTEKTVTAERAFLHTVEGG 240
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ +AG+A + + +V + DG+ S G D + IG++ AQ + K
Sbjct: 241 CQVPVAGYATLQDNGEIALTALVGSPDGQQIFRESIAGT--DPVAIGKEVAQRMLKAGAK 298
Query: 303 NVFN 306
V +
Sbjct: 299 KVLD 302
>gi|296132653|ref|YP_003639900.1| porphobilinogen deaminase [Thermincola sp. JR]
gi|296031231|gb|ADG81999.1| porphobilinogen deaminase [Thermincola potens JR]
Length = 310
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 160/283 (56%), Gaps = 4/283 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+GTR S LA+ ++T + ++ K+ P + I+ + T+GD+I + L +IG KGLFT+
Sbjct: 7 VGTRDSALAM---WQTNWVVDNLRKLNPDYTFKIVSMKTQGDKILDVALAKIGDKGLFTK 63
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E ++ EID AVHS KD+PT L +GL+I A R D RDV ++ LKD+ +
Sbjct: 64 ELEFAMLRNEIDLAVHSMKDLPTVLPEGLKIGAICERHDPRDVLVARDGILLKDMPQGAR 123
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSSLRR A LL++R D+ +I RG + TR+ KL I+LA AGI+RL I
Sbjct: 124 IGTSSLRRTAQLLKYRPDLQIISLRGNLNTRMAKLERENLDGIILAAAGIERLGWAYRIT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ + E P+ GQG+I IE + + +V +NH + ++ ERA L +L+G C+
Sbjct: 184 QRIPFEVCLPAVGQGSIGIEIREGDEEVSRIVDKLNHGPSAAAITAERAMLKKLEGGCQI 243
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +G L G+V + DGK G +A ++G
Sbjct: 244 PIGALGRVEGDRLTLEGVVASLDGKELLRSRVEGPASEAASLG 286
>gi|23099523|ref|NP_692989.1| porphobilinogen deaminase [Oceanobacillus iheyensis HTE831]
gi|39931547|sp|Q8CXC0|HEM3_OCEIH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|22777752|dbj|BAC14024.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Oceanobacillus iheyensis HTE831]
Length = 309
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 171/302 (56%), Gaps = 9/302 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+GTR S LAL T + + K N I + TKGD+I + TL+++GGKGLF +
Sbjct: 6 VGTRKSNLALTQ---TEWVIDQLKKAGVKNEFEIKKIVTKGDQILDVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIEK + EID AVHS KDMP + +GL IS+ RED RD +++ L+DL ++
Sbjct: 63 EIEKAMFDKEIDLAVHSMKDMPAVIPEGLTISSIPEREDHRDAYLAKDNILLQDLPEGAI 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185
+GTSSLRR A +L R D+++ RG IETR+ KL AI+LA +G+KR+ E++I
Sbjct: 123 VGTSSLRRGAQILAERPDLTIKWIRGNIETRIRKLQEEDYDAIILAVSGLKRVGLSEELI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L E P+ GQGA+ IE+ ++ + +VK I+ T +V+ ER FL L+G C+
Sbjct: 183 TEYLEPEVCVPAVGQGALAIESREDDEELTNIVKKIHDAYTAKTVSAERTFLHLLEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
I G+AY G + +V DG I E R + +G++AA+ + K +
Sbjct: 243 VPIGGYAYLDGDEVVLTALVGDPDGTTILKETVRG---TEPTEVGKEAAELLISQGAKEI 299
Query: 305 FN 306
+
Sbjct: 300 VD 301
>gi|304414148|ref|ZP_07395516.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1]
gi|304283362|gb|EFL91758.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1]
Length = 312
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 2/293 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A R SL H P + ++P++T+GD + + L +IGG
Sbjct: 1 MSEKVIRIATRQSPLALWQADYVRKSLESHH--PDLQVKLVPITTRGDTLLHTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KD+P GL + R D D F+S + LK
Sbjct: 59 KGLFVKELEQALLENCADIAVHSIKDVPIHFPAGLGLVVICQRGDPHDAFVSKNYKHLKQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ + + + V D RG + TRLNKL+ AI+LA AG++RL
Sbjct: 119 LPPGSIVGTSSLRRQCQIRKKYPHLIVRDLRGNVGTRLNKLDQGAYQAIILAVAGLQRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ +++ E+ P+ GQGAI IE + + ++L+ +NH T + ERA L
Sbjct: 179 LQSRIQHVMSPEESLPAAGQGAIGIECRLEDDVTRQLLAPLNHFPTERRICAERALNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+G C+ I +A +G L V DG R G A IG D A
Sbjct: 239 EGGCQVPIGSYAELEGDNLRLRAFVSTPDGSQMIYGERCGLAIQAEKIGLDLA 291
>gi|297568516|ref|YP_003689860.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2]
gi|296924431|gb|ADH85241.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2]
Length = 311
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 161/282 (57%), Gaps = 2/282 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LALA + + + + P ++ ++ + TKGD+I + L ++GGKGL
Sbjct: 3 KTIRIGTRASMLALAQSNWIKGRIE--AQYPGCSVELVKIVTKGDKIVDVPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ E+D AVHS KD+P +L +GL I RE D FI++ ++L ++
Sbjct: 61 FVKEIEEALLRREVDIAVHSMKDVPAELPEGLHIGIITEREKPFDAFITNNYKTLAEVPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRRKA L R R D+ + D RG ++TRL KL+ AI+LA AG+ RL
Sbjct: 121 GATIGTSSLRRKAQLARLRPDLKIEDLRGNLDTRLRKLDEGVYDAIILAAAGLNRLDLFH 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ P+ QGA+ IE + +++ ++H +T +V+ ER++L L+G
Sbjct: 181 RATFCFQPDEMLPAVAQGAVGIELRRADEDLLQMLSFMDHRETTLAVHAERSYLKRLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
C+ +AGFA G TL G++ + DG + +G A
Sbjct: 241 CQVPLAGFATLAGQTLTINGLIASVDGGKMVKAKHSGPAAQA 282
>gi|299822782|ref|ZP_07054668.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601]
gi|299816311|gb|EFI83549.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601]
Length = 311
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 166/297 (55%), Gaps = 13/297 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +G+R S LAL +T + ++ K P + I + TKGD+I + TL+++GGK
Sbjct: 2 KSQIIVGSRRSKLAL---VQTNWVINELKKHYPTIDFRIEEMVTKGDKILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L+ ID AVHS KD+P + +GL I+A RE DVF+ DL
Sbjct: 59 GLFVSEVEQALVDKHIDFAVHSMKDVPAVIEEGLTIAAIPERESANDVFVFKEVHDFGDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSSLRR + +L R D+ + RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 PTQAIIGTSSLRRASQILAERPDLQIKFIRGNIDTRLRKLREEDFDAIILAQAGLSRMG- 177
Query: 182 EKVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+ + L I+ P P+ GQGA+ IE + +++++ I+H T + V ERAF
Sbjct: 178 -WLEDDSLRIQTIPETICLPAVGQGALAIECREEDNDTKDILRSIHHAITANCVAAERAF 236
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
L L+G C+ IAG+A GS + F G+V DGK E R G DA IG +AA
Sbjct: 237 LKTLNGGCEIPIAGYATQSGSKVSFKGLVGTPDGKTIWEAERVGE--DADQIGTEAA 291
>gi|126666605|ref|ZP_01737583.1| porphobilinogen deaminase [Marinobacter sp. ELB17]
gi|126628993|gb|EAZ99612.1| porphobilinogen deaminase [Marinobacter sp. ELB17]
Length = 313
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 167/295 (56%), Gaps = 3/295 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L +H + ++ + T GD+I + L ++GG
Sbjct: 1 MSARNLRIATRSSALALWQAEFIKAELERLHS--NVTVELVKIKTLGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +GL + A R+D D FIS+ SL D
Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMAFPEGLGLVAICERDDPTDAFISNHFSSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L++V+GTSSLRR++ L R D+ + RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPLNAVVGTSSLRRESQLRANRPDLQIRVLRGNVNTRLAKLDAGNYDAIILASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + P+ GQGA+ IE +++ + + +++ +NH D+ D V ERA L
Sbjct: 179 FEARIRNCMPDTLSLPAVGQGALGIECRLDDQELRAMLEPLNHTDSADRVKAERALNTRL 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+G C+ IA +A + L+ G+V A DG + +R + +GR+ A+
Sbjct: 239 NGGCQVPIAAYALLEDNDMLWLRGLVGAVDGSLIFRAEGRVHRSEGERLGRELAE 293
>gi|254828209|ref|ZP_05232896.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165]
gi|258600598|gb|EEW13923.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165]
Length = 309
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 162/283 (57%), Gaps = 9/283 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L KGL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKKGLIIGAIPKRESPLDCFVFNQVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 178 WLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+L+G C+ IAGFA + F G+V +DG I E + G
Sbjct: 238 KKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG 280
>gi|110636914|ref|YP_677121.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406]
gi|123163848|sp|Q11XT5|HEM3_CYTH3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110279595|gb|ABG57781.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406]
Length = 312
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 165/276 (59%), Gaps = 14/276 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A E ++ + + P ++I T GD+I +++L++IG KGL
Sbjct: 3 KTVRIGTRGSKLALWQA-EHVAACLQTKGLEPQIVII---DTTGDKILDQSLSKIGSKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH----TAQSLK 119
FTEE+E++L +G ID AVHSAKD+ T L G+ I A RE + DV +SH T ++
Sbjct: 59 FTEELEEQLHAGTIDIAVHSAKDLQTHLKGGMYILAITERELVNDVLVSHKPIDTLKNNP 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +IGTSS RR+ALL ++ ++D RG ++TR+ K+ A+LLAYAG+ R+
Sbjct: 119 DL----IIGTSSTRRRALLRKFYPQAKMVDMRGNLQTRIRKMEEGACDAMLLAYAGMHRM 174
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ +IKE L++E+F P+ GQG + IE + ++ KA + V+N T +V+ ERAFL
Sbjct: 175 GYDSLIKEKLSLEEFIPAAGQGTLAIEAASTLDKEKAAVIRAVLNDAATETAVSAERAFL 234
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L+G C + A + + G +++ DG +
Sbjct: 235 RTLEGGCSIPVFALAVERDTDYLLTGGIVSLDGTKY 270
>gi|91791755|ref|YP_561406.1| porphobilinogen deaminase [Shewanella denitrificans OS217]
gi|91713757|gb|ABE53683.1| porphobilinogen deaminase [Shewanella denitrificans OS217]
Length = 315
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L +H P ++ ++P++TKGD + + L ++GG
Sbjct: 6 MSQHLIRIATRKSPLALWQAEFVKAELERIH--PGLSVELVPMTTKGDVLLDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +L +
Sbjct: 64 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNFANLAE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK
Sbjct: 124 LPKGAVVGTSSLRRQCQIRAMRPDLIIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 184 LISRIASYISPEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVIAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L G+V DG G + +A +G A+ +
Sbjct: 244 EGGCQVPIGAYAEIEGDELTLRGLVGNPDGSQIITGQVKGLKSEASQLGEQLAEILLAQG 303
Query: 301 NKNVFN 306
K + +
Sbjct: 304 AKTILD 309
>gi|125717350|ref|YP_001034483.1| porphobilinogen deaminase [Streptococcus sanguinis SK36]
gi|254800260|sp|A3CL78|HEM3_STRSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125497267|gb|ABN43933.1| Porphobilinogen deaminase, putative [Streptococcus sanguinis SK36]
Length = 306
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 169/309 (54%), Gaps = 14/309 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +EIE+ L++GEI+ AVHS KDMP KL +G + A RED+RD I A Q+L DL
Sbjct: 60 FVKEIERALLAGEINMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
S+IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L
Sbjct: 120 KGSLIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ + L P+ QGA+ +E + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELLSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRF 298
++ C IA FA G ++ DG+ IF VS G + A Q +R
Sbjct: 240 MNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF--VSLQGQDGQQL-----AEQAVRQ 292
Query: 299 ISNKNVFNF 307
+++K
Sbjct: 293 LADKGAVGM 301
>gi|226946767|ref|YP_002801840.1| porphobilinogen deaminase [Azotobacter vinelandii DJ]
gi|226721694|gb|ACO80865.1| porphobilinogen deaminase [Azotobacter vinelandii DJ]
Length = 314
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 154/270 (57%), Gaps = 2/270 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 5 REIRIATRKSALALWQAEYVKARLEQAH--PGLAVSLVPMVSRGDKLLDAPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L
Sbjct: 63 FVKELETALLENAADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNAFASLDELPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S+IGTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL E
Sbjct: 123 GSLIGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEG 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + I D P+ GQGA+ IE + + Q L+ ++H T V ERA L+G
Sbjct: 183 RIRSRIAIADSLPAGGQGAVGIECRSADREIQALLAPLDHAPTALRVGAERALNKRLNGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
C+ IA +A + L+ G+V DG++
Sbjct: 243 CQVPIACYAELEDGQLWLRGLVGQPDGRLL 272
>gi|87200799|ref|YP_498056.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM
12444]
gi|87136480|gb|ABD27222.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM
12444]
Length = 312
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 154/268 (57%), Gaps = 3/268 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P ++GTR SPLA+A A E R+ L H + ++P++ GD+I +R L +IGGK
Sbjct: 7 QRPLKLGTRRSPLAMAQAEEARARLCAAHGWAESQVELVPVTASGDKIQDRPLADIGGKA 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
L+T+E++ L+SGEID AVHS KD+ T + I+A LPR D+RDV I A S+ +
Sbjct: 67 LWTKELDAWLVSGEIDFAVHSMKDVETIRPENFAIAAVLPRADVRDVLIG--AASIHAIP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL E
Sbjct: 125 PGARVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLAKLQAGEADVTLLAAAGLGRL-GE 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ L+ ++ P+P QGAI IE + + I+ + T ++ ERA L L G
Sbjct: 184 TGVGHPLSEYEWLPAPAQGAIGIECLASRADLCAWLGAIDDKPTHHAIRAERALLLALGG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+C S IA S+L + + DG
Sbjct: 244 NCHSPIAVLTTHHESSLTLRAALFSPDG 271
>gi|153953354|ref|YP_001394119.1| porphobilinogen deaminase [Clostridium kluyveri DSM 555]
gi|146346235|gb|EDK32771.1| HemC [Clostridium kluyveri DSM 555]
Length = 305
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 158/291 (54%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FRI TR S LAL L K+ ++I T+GDR + +L +IGGKG+F
Sbjct: 18 FRIATRKSKLALVQTDYVIDLLALKFKMQCEKVLI---RTEGDRKLDVSLDKIGGKGVFV 74
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL +
Sbjct: 75 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 134
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I
Sbjct: 135 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 194
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E N +F P+ GQGAI +E N+ A L K I++ED V ER+FL +L G C
Sbjct: 195 TEYFNPFEFIPAVGQGAIGVEILKNSEYASTLGK-IDNEDIRMGVEAERSFLKKLQGDCH 253
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + ++ +G L GI + I +V G++ D I +G + I
Sbjct: 254 TPVGAYSVIEGEILNITGIFQVGNKLIKKDVC--GDKWDYIALGESLGEKI 302
>gi|219853983|ref|YP_002471105.1| hypothetical protein CKR_0640 [Clostridium kluyveri NBRC 12016]
gi|254800246|sp|B9DZL6|HEM3_CLOK1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219567707|dbj|BAH05691.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 290
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 158/291 (54%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FRI TR S LAL L K+ ++I T+GDR + +L +IGGKG+F
Sbjct: 3 FRIATRKSKLALVQTDYVIDLLALKFKMQCEKVLI---RTEGDRKLDVSLDKIGGKGVFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL +
Sbjct: 60 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I
Sbjct: 120 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E N +F P+ GQGAI +E N+ A L K I++ED V ER+FL +L G C
Sbjct: 180 TEYFNPFEFIPAVGQGAIGVEILKNSEYASTLGK-IDNEDIRMGVEAERSFLKKLQGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + ++ +G L GI + I +V G++ D I +G + I
Sbjct: 239 TPVGAYSVIEGEILNITGIFQVGNKLIKKDVC--GDKWDYIALGESLGEKI 287
>gi|302342250|ref|YP_003806779.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075]
gi|301638863|gb|ADK84185.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075]
Length = 310
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 157/299 (52%), Gaps = 4/299 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL-STKGDRITNRTLTEIGGKGLFTE 66
I TR S LALA A R + + + P V + L TKGD+I + L ++GGKGLF +
Sbjct: 6 IATRGSELALAQA---RWAARQLSALSPGLEVELQLFKTKGDKILDAPLAKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE L+ G AVHS KDMP +L GL I+A RED RDV IS L +L
Sbjct: 63 EIEDALLDGRARVAVHSMKDMPAELPPGLCIAAVSRREDPRDVLISRDGLGLDELPATPR 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A LL R D V+ RG ++TRL KL AI+LA AG+ RL +
Sbjct: 123 LGTSSLRRQAQLLARRPDAMVVSVRGNVQTRLRKLEELGLDAIVLAAAGLDRLGLSDPRR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L E P+ GQGA+ IE ++ EL + H+ T +V ERAFL L+G C+
Sbjct: 183 VDLAPELMLPAVGQGALAIEARADDAFCLELCARLAHQPTAVAVEAERAFLGRLEGGCQV 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAG A G + F G+V + DGK G +A +G A+ I + +
Sbjct: 243 PIAGHAVVDGDEIVFEGLVASLDGKRLIRRRAVGRADEAGPLGLAVAEEILADGGRQIL 301
>gi|329898164|ref|ZP_08272361.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088]
gi|328920873|gb|EGG28310.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088]
Length = 307
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 159/286 (55%), Gaps = 2/286 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLAL A + +L H P + ++ ++++GD++ + L +IGGKGLF +E
Sbjct: 6 IATRESPLALWQAHYVKDALEMAH--PGLAVELLGMTSRGDQLLDSPLAKIGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P +GL + RE D F+S+T +S+ L +++
Sbjct: 64 LETALLEGRADIAVHSMKDVPMSFPEGLCLGPICEREAPNDAFVSNTYESIDALPKGAIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ L +R D+ V RG + TRL KL++ + AI+LA AG+ E I+
Sbjct: 124 GTSSLRRECQLRSYRPDLVVNFLRGNVNTRLAKLDDGQYDAIILAAAGLILFGFEDRIRS 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L E P+ GQGA+ IE ++ ++L++V++H T V ERA L+G C+
Sbjct: 184 RLTPEQSLPAGGQGAVGIELRSDDEPTRDLIQVLHHPKTAAEVTAERALNQTLNGGCQVP 243
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
IA F +G TL+ G+V A DG G DA +G+ A
Sbjct: 244 IAAFCVTEGDTLWLRGLVGAVDGSSILRAEARGKVEDAEVLGQQVA 289
>gi|224499785|ref|ZP_03668134.1| porphobilinogen deaminase [Listeria monocytogenes Finland 1988]
Length = 309
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 162/283 (57%), Gaps = 9/283 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 178 WLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+L+G C+ IAGFA + F G+V +DG I E + G
Sbjct: 238 KKLNGGCEIPIAGFATRANEVVQFKGLVGNADGSIILESEQVG 280
>gi|215434281|gb|ACJ66828.1| porphobilinogen deaminase [uncultured bacterium pSY1435]
Length = 310
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LAL A R L+ + ++ ++T+GDRI +R L E+GGKGLF
Sbjct: 7 LRLGTRASALALWQARHVRDRLL-ARWGAAIEVELVEITTEGDRIIDRPLNEVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
IE +L+ ID AVHS KD+P GL I R D RDV + +L L +
Sbjct: 66 TGIEDRLLDRSIDFAVHSMKDLPGHTPDGLAIVCTPERADARDVLVGRAGSTLVRLPAGT 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR AL R I VI RG + TR+ K+ + +LLA AG++RL+ + +
Sbjct: 126 RVGTSSLRRAALARRINPGIEVIAIRGNVPTRIAKIADGVCDVVLLAAAGLERLELAQHV 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ E F P+ QG + IE ++ + EL+ + H DT ER FLA L+G C+
Sbjct: 186 AEYLDPESFCPAACQGILAIEARADDRRVHELLAPLEHADTATLAAAERGFLARLEGGCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A A L+ G+V+ G+ + G A +GR A+ + + +
Sbjct: 246 VPMACHARLDAGVLHVRGLVVGIGGEPLFDAREQGEPSAAAQLGRTVAEQLLVLGAAEIL 305
>gi|320529107|ref|ZP_08030199.1| porphobilinogen deaminase [Selenomonas artemidis F0399]
gi|320138737|gb|EFW30627.1| porphobilinogen deaminase [Selenomonas artemidis F0399]
Length = 311
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKEMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G+ID AVHS KDMPT++ GL I A R D D F+S+ ++++
Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPTEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ + A++LA AG++RL
Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGEFDAVVLAAAGLRRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ +L P+ GQGA+ IE ++ + + + D + ERAFL +
Sbjct: 179 LGDRIRSVLPRAMMLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRV 238
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A G LY ++ + DG +G A IG A+ + +
Sbjct: 239 EGGCQIPVGVYAEIGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDM 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GGREIL 304
>gi|33593520|ref|NP_881164.1| porphobilinogen deaminase [Bordetella pertussis Tohama I]
gi|39931430|sp|Q7VVU9|HEM3_BORPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33572876|emb|CAE42812.1| porphobilinogen deaminase [Bordetella pertussis Tohama I]
gi|332382928|gb|AEE67775.1| porphobilinogen deaminase [Bordetella pertussis CS]
Length = 314
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 156/287 (54%), Gaps = 2/287 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF +E
Sbjct: 9 IATRASRLALWQAEHVRDLLR--ARYPACSVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL + +
Sbjct: 67 LETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I+
Sbjct: 127 GTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRA 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L +D P+ GQGA+ IE + ++ + T V ERA L GSC+
Sbjct: 187 LLEPDDSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+A +A G L +V A DG+ R G R A IG AA+
Sbjct: 247 LAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAAR 293
>gi|261405370|ref|YP_003241611.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10]
gi|329928511|ref|ZP_08282379.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5]
gi|261281833|gb|ACX63804.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10]
gi|328937770|gb|EGG34178.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5]
Length = 318
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 164/293 (55%), Gaps = 12/293 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + L + K ++ + + TKGDRI + TL+++GGKGLF
Sbjct: 6 VGSRQSALALTQTGQVIDDLKRLAKEHGLEYDFAVKKIVTKGDRILDVTLSKVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ +I GEID AVHS KDMP+ L +GL A R+D RD IS +L DL +
Sbjct: 66 KEIEQAMIDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGTTLDDLPQGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+ E I
Sbjct: 126 KVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIILATAGLQRMGWEDRI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL+G C+
Sbjct: 186 TSYLPVEVSLPAVGQGALGIECRENDEELLHLLSLYNDEVTARTVAAERKFLSELNGGCQ 245
Query: 246 SAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I +A K + + G+V + DG+I + S G +A+ +
Sbjct: 246 VPIGAYAVMKNVEAGDSRGEQNVIQLTGMVGSPDGEIVLKESAEGTDPEALGV 298
>gi|317122098|ref|YP_004102101.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885]
gi|315592078|gb|ADU51374.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885]
Length = 335
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 168/317 (52%), Gaps = 19/317 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A L H P + ++P++T GDR R L + G F
Sbjct: 6 VRIGTRASALARIQAQWVARELQRHH--PGLQVELVPVTTHGDRHRARPLYTLDTPGAFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--------- 116
+E+E+ L +G ID AVHSAKD+PT+L +GL+++A+ RED D + +Q
Sbjct: 64 KELEEALRAGIIDLAVHSAKDVPTRLPEGLELAAFPQREDPGDALVLPRSQEGLGPNGRD 123
Query: 117 --------SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
+L+ L + +GTSSLRR+A L R D+ V RG ++TRL +L+ A
Sbjct: 124 AGRGAGMTALELLPPGARVGTSSLRRQAWLRARRPDLKVEPARGNLDTRLRRLDEGAWDA 183
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
++LA AG++RL I + P+PGQGA+ +E ++ + LV+V++ +
Sbjct: 184 LVLAAAGLRRLGVGHRITAAIPPRALLPAPGQGALAVEIRASDDATRRLVQVLDRPEVAL 243
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+V ERAFLAEL G+C+ + +A +G L G+V A DG + E G D +
Sbjct: 244 AVRAERAFLAELGGTCRIPLGAWARLEGPRLRLAGMVAAPDGDPWLEEEVEGPATDPEAV 303
Query: 289 GRDAAQYIRFISNKNVF 305
GR+ A+ +R ++V
Sbjct: 304 GRELAERLRARGAESVL 320
>gi|315125211|ref|YP_004067214.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913]
gi|315013724|gb|ADT67062.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913]
Length = 312
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 165/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR S LAL A ++ L H + ++P+ST+GD I + L +IGGKGL
Sbjct: 6 KLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++ G D AVHS KD+P + L++ RED RD F+S+ ++ L
Sbjct: 64 FVKELEQAMLDGRADIAVHSMKDVPVEFPDDLELHVICEREDPRDAFVSNNFANIDALPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ RL+ +
Sbjct: 124 GAIVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDSGQYDAIILAAAGLIRLEMGE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I++ + E P+ GQGA+ IE +N+ + L+ + H +T VN ERA L+G
Sbjct: 184 RIRDFIEPEVSLPANGQGAVGIECRINDEVTKALLAPLEHSETRIRVNAERAMNRHLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I +A G ++ G+V A DG +G+ DA +G + A+ +
Sbjct: 244 CQVPIGAYALVDGEQVHLRGLVGAIDGSEILRDEISGHVDDAEKLGVELAKKL 296
>gi|224826001|ref|ZP_03699104.1| porphobilinogen deaminase [Lutiella nitroferrum 2002]
gi|224601638|gb|EEG07818.1| porphobilinogen deaminase [Lutiella nitroferrum 2002]
Length = 311
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 165/289 (57%), Gaps = 2/289 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF +E
Sbjct: 6 IASRESKLAMWQAEHIKARLEQLY--PQLAVEILGMTTQGDQILDKTLSKIGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A RED RD F+S+T SL +L +V+
Sbjct: 64 LELALQEGRADLAVHSIKDVPMNLPEGFALAAICEREDPRDAFVSNTYASLSELPDGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L +++ RG ++TRL KL++ + AI+LA AG+KRL+ I+
Sbjct: 124 GTSSLRRESQLRARFPRLTIKPLRGNVQTRLRKLDDGEFDAIILAAAGLKRLELSARIRC 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L + P+ GQGA+ IE + +L+ ++H DT V+ ERA L GSC+
Sbjct: 184 ELAPSESLPAVGQGALGIEIRADRADLMQLLAPLDHADTHACVSAERALSRVLGGSCQIP 243
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ GFA + G V DG + S + R A +GR AQ +
Sbjct: 244 LGGFATLSDDVITLGGFVAHPDGSVMLTASASAPREYADALGRAVAQKL 292
>gi|15892629|ref|NP_360343.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7]
gi|20138263|sp|Q92HR5|HEM3_RICCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15619798|gb|AAL03244.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7]
Length = 351
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 165/294 (56%), Gaps = 24/294 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L +
Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDVPGRMPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQN 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL
Sbjct: 122 AVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL----- 176
Query: 185 IKEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
E+ N E P GQG I +E ++ E+ INH T++ + ERAF
Sbjct: 177 --EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAF 234
Query: 237 LAELDGSCKSAIAGFA-YCKGSTLYF----YGIVLASDGKIFHEVSRNGNRCDA 285
L LD +C++ IA ++ Y + + Y VL + + + NR DA
Sbjct: 235 LEYLDANCRTPIAAYSQYLDANPRHLSKLAYREVLEGNTEALATAAYKSNRTDA 288
>gi|157803668|ref|YP_001492217.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel]
gi|166217783|sp|A8EYJ9|HEM3_RICCK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157784931|gb|ABV73432.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel]
Length = 301
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 153/249 (61%), Gaps = 5/249 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLAL +T + + + +P N I+P++T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLAL---IQTNLVIQQIKQFVPDINYKIVPITTSGDLIQNKPLYDIGGKALF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L +
Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDVPGRIPEDLIIAAVLEREDPRDVFVCLKYKSIEELPQN 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183
++IG+S++RRK + + RSD+ V FRG +++R+ KL N + A +LAYAG+KRL
Sbjct: 122 AIIGSSAVRRKTFIEKIRSDLKVTVFRGNVDSRIKKLMNGEVDATILAYAGLKRLNAFNP 181
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ P GQG I +E ++ E INH T++ + ERAFL LD +
Sbjct: 182 QYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLETCNQINHLTTFELIKPERAFLEYLDAN 241
Query: 244 CKSAIAGFA 252
C++ IA ++
Sbjct: 242 CRTPIAAYS 250
>gi|307720830|ref|YP_003891970.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294]
gi|306978923|gb|ADN08958.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294]
Length = 319
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 174/300 (58%), Gaps = 6/300 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A+ + + +V+ P +V+ + + GD++ ++ L IGGKG
Sbjct: 2 KKLTIATRVSDLALWQAYHIKERV-EVN-YPEIEVVLNKIVSNGDKVLDKPLALIGGKGH 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++++G + AVHS KD+PT + GL++ A R+D DVF+SHT +L DL
Sbjct: 60 FTKELEDEMLAGNAELAVHSLKDVPTYIPDGLELVAVTQRQDQSDVFLSHTYATLDDLPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LA+ G+ RL K
Sbjct: 120 GAVVGTTSLRRRMQLLQKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAWIGLNRLDLLK 179
Query: 184 VI--KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I + L+++ P GQ A+ IE +N K +E+ K +N EDT+ ER F++++
Sbjct: 180 DIPYTQKLSLDMMIPPMGQAALGIEIISDNEKVREIAKSLNDEDTFTCTQIERDFISKIG 239
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + +A A G + F ++ DG + ++ ++ N+G++ AQ + I+N
Sbjct: 240 AGCSAPVACNAVIDGDNVVFRTMIGFPDGTNIMQKKVVKSKNESENLGKELAQ--KMINN 297
>gi|67459209|ref|YP_246833.1| porphobilinogen deaminase [Rickettsia felis URRWXCal2]
gi|75536359|sp|Q4ULA5|HEM3_RICFE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|67004742|gb|AAY61668.1| Porphobilinogen deaminase [Rickettsia felis URRWXCal2]
Length = 301
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 153/249 (61%), Gaps = 5/249 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLAL +T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLAL---IQTNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L +
Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAILEREDPRDVFVCLNYKSIEELPQN 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183
+VIG+S++RRKA + + RSD+ V FRG I++R+ KL + A +LAYAG+KRL+
Sbjct: 122 AVIGSSAVRRKAFIQKIRSDLKVTVFRGNIDSRIKKLMTAEVDATILAYAGLKRLRAFNP 181
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +
Sbjct: 182 EYCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHLPTFELIKPERAFLEYLDAN 241
Query: 244 CKSAIAGFA 252
C++ IA ++
Sbjct: 242 CRTPIAAYS 250
>gi|15615608|ref|NP_243912.1| porphobilinogen deaminase [Bacillus halodurans C-125]
gi|11386834|sp|Q9K8G0|HEM3_BACHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|10175668|dbj|BAB06765.1| porphobilinogen deaminase [Bacillus halodurans C-125]
Length = 311
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 168/302 (55%), Gaps = 8/302 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL S L + P + I + TKGD+I + TL+++GGKGLF +E
Sbjct: 6 IGSRRSQLALTQTEWVISKLKEAG--APFDFEIKKIITKGDQILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ + + EID AVHS KD+P+ L +G + A R D RD IS+ +L +L S++
Sbjct: 64 IEQAMANKEIDIAVHSMKDVPSVLQEGFALGATTTRVDPRDALISNEGYTLAELPAGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L R D+ V RG IETRL KL AI+LA AG++R+ +++
Sbjct: 124 GTSSLRRSAQILAKRPDLEVKWIRGNIETRLRKLKEEDFDAIILAAAGLERMGWSNEIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ + P+ GQGA+ IE ++ + E++K IN + T +V ER FL ++G C+
Sbjct: 184 EYLDPDLCVPAVGQGALGIECRADDDEVLEMLKTINDDTTAKTVLAERTFLHRMEGGCQV 243
Query: 247 AIAGFA-YCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
IAG+A + +V DG +IF E+ R D + +G AQ + K V
Sbjct: 244 PIAGYATLTDEGEIELTALVGTPDGEQIFKEILRGK---DPVQLGETMAQALMDQGAKEV 300
Query: 305 FN 306
Sbjct: 301 LE 302
>gi|239827917|ref|YP_002950541.1| porphobilinogen deaminase [Geobacillus sp. WCH70]
gi|259647799|sp|C5D5K7|HEM3_GEOSW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|239808210|gb|ACS25275.1| porphobilinogen deaminase [Geobacillus sp. WCH70]
Length = 311
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 168/291 (57%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL L + P + + TKGD+I + TL+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWVIERLRQLG--APFEFEVKEIVTKGDKIIDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE +++GEID AVHS KDMP L GL I PRED DV IS ++ +L +++
Sbjct: 64 IEHAMLNGEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHHDVLISKNKETFANLPSGAIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIK 186
GTSSLRR A +L R D+ + RG I+TRL KL N AI+LA AG+ R+ + VI
Sbjct: 124 GTSSLRRSAQILAKRPDLKIKWIRGNIDTRLAKLQNEDYDAIILAAAGLVRMGWARDVIT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ + P+ GQGA+ +E N+ + +E ++ +N T +V ER FL +++G C+
Sbjct: 184 EYLSTDVCLPAVGQGALAVECRENDEELREWLQKLNDVHTERAVLAERVFLQQMEGGCQV 243
Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+AY + +V + DGK ++ + +G+ + +G +AA+ +
Sbjct: 244 PIAGYAYIDDREDIVLTALVASPDGKEIYKETVSGSNPE--EVGTNAAKML 292
>gi|308070414|ref|YP_003872019.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681]
gi|305859693|gb|ADM71481.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681]
Length = 308
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 163/282 (57%), Gaps = 14/282 (4%)
Query: 8 IGTRCSPLAL---AHAFETRSSL-----MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
+G+R S LAL H E ++L MD+ V+ + TKGDRI + TL+++G
Sbjct: 6 VGSRQSALALTQTGHVIEDLNALCAEQGMDLQ------FVVKKILTKGDRILDVTLSKVG 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+
Sbjct: 60 GKGLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPHREDPRDCLITLGAKSLE 119
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+
Sbjct: 120 DLPQGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ I + D P+ GQGA+ IE ++ + L+++ N DT +V ER FL
Sbjct: 180 GWKERITSYIPEADCLPAVGQGALGIECRASDEELLALLRLYNDRDTSATVAAERTFLGV 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
L+G C+ I A G + G+V + DG++ + + GN
Sbjct: 240 LNGGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGN 281
>gi|114321817|ref|YP_743500.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|122310751|sp|Q0A577|HEM3_ALHEH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114228211|gb|ABI58010.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 308
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 154/271 (56%), Gaps = 2/271 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A + L H P + ++P+ T+GDRI ++ L+ IGG
Sbjct: 1 MPQDKLRIATRRSPLAMWQAEHVAAELRRHH--PGLEVELVPMVTRGDRILDQALSRIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ + G D AVHS KD+P ++ G + L R + D F+S+ + L D
Sbjct: 59 KGLFIKELEQGMEEGRADLAVHSMKDVPWRMPDGFALPVILERHEPTDAFVSNHYRRLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +GT+SLRR+ R D+ V RG + TRL KL+ + AI+LA +G+ RL
Sbjct: 119 LPEGGHLGTASLRRQCQAKARRPDLRVSTLRGNVNTRLAKLDAGEFDAIILAASGLSRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I L E+ P+ GQGA+ IE + + QELV ++H T + ERA A L
Sbjct: 179 FDERIARRLPPEESLPAVGQGALGIECLAEDRRVQELVAPLDHGPTHTLLKAERAMNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
GSC+ IAG+A +G ++ G+V + DG+
Sbjct: 239 QGSCQVPIAGYACYQGEEIWLRGLVGSPDGQ 269
>gi|260893122|ref|YP_003239219.1| porphobilinogen deaminase [Ammonifex degensii KC4]
gi|260865263|gb|ACX52369.1| porphobilinogen deaminase [Ammonifex degensii KC4]
Length = 308
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 157/270 (58%), Gaps = 3/270 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RIGTR S LALA + L + + P + I+ + T GD++ N L IGGKG
Sbjct: 5 KRCLRIGTRGSDLALAQTEQVLQILRE--RWPHYTYEIVKIKTTGDKVRNLALPRIGGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E L+ +ID AVHS KD+PT+L + L + A LPRE DV IS T L+DL
Sbjct: 63 LFTKELEVALLEEKIDLAVHSLKDLPTELPEELCVGAVLPREHPGDVLISLTGAGLEDLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR+A L R D++ + RG + TRL KL + A++LA+AG++RL+ +
Sbjct: 123 EGARIGTSSLRRQAQLKAARPDLNFVPLRGNVPTRLRKLEKGECEAVVLAWAGLRRLRLD 182
Query: 183 KVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +L + P+ QGAI +E + + +++V+V++ T V ERAFL L
Sbjct: 183 LTGRMTLLPYQVCLPAVAQGAIGVEMRKEDRELRKMVEVLDDPTTRLEVTAERAFLRWLG 242
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
G C IA A G+ + G+V +GK
Sbjct: 243 GGCHVPIAALARVAGAEILLEGLVADPEGK 272
>gi|218437216|ref|YP_002375545.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424]
gi|218169944|gb|ACK68677.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424]
Length = 320
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 161/297 (54%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L H P + +ST+GD+I + L +IG KGL
Sbjct: 8 RTVRIGSRKSQLALVQTYWVQEQLQKHH--PDRQFEVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E ++ G+ D AVHS KD+PTKL GL + R D D + H + ++
Sbjct: 66 FTKELEVSMLEGQTDLAVHSLKDLPTKLPDGLMLGCITERVDPADGLVVNEKHKDKQIET 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 126 LPEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLTRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + + GQGA+ IE +P+ EL+KV+ H+ T D ER+FL EL
Sbjct: 186 MSDRIHQVIPSDISLHAVGQGALGIECRTEDPEILELLKVLEHQPTRDRCYAERSFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I G TL G+V + DGK + + G DA +G+D A +R
Sbjct: 246 EGGCQVPIGVNTSVDGDTLTLTGMVASLDGKKLIKDTITGKTTDAEQLGKDLAIRVR 302
>gi|258514534|ref|YP_003190756.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771]
gi|257778239|gb|ACV62133.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771]
Length = 309
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 153/264 (57%), Gaps = 2/264 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL A L + + P ++ I + T GD I + L +IG KGLFT+E
Sbjct: 6 VGTRDSQLALWQANWVVDRLRE--RNPGYSFRIQGIKTHGDNILDVALAKIGDKGLFTKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+S EID AVHS KD+PT L GL + A RE DV +S L L +VI
Sbjct: 64 LEVALLSDEIDLAVHSMKDLPTDLPGGLAVGAVCEREYPGDVLVSSQGYVLDKLPEGAVI 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR A LL +R D+ +++ RG + TRL K++ K ++LAYAGI+RL + I E
Sbjct: 124 GTSSLRRTAQLLHYRQDLRIVNIRGNLNTRLRKMDEEKLDGVVLAYAGIQRLGLKDRITE 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ +E P+ GQG+I IE + + ++V+ I H + +V+ ER FL L+G C+
Sbjct: 184 RIPMEICLPAVGQGSIGIEIRHLDEEIMDIVETIEHRPSRIAVSAERNFLKRLEGGCQVP 243
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271
I + G+ + F G++ + DGK
Sbjct: 244 IGAYGLVIGNEIKFEGLIASLDGK 267
>gi|254508818|ref|ZP_05120929.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16]
gi|219548275|gb|EED25289.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16]
Length = 271
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 146/247 (59%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ TKGD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL +
Sbjct: 1 MVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+T ++ +L +V+GT SLRR+ + +R D+ + + RG + TRL KL+
Sbjct: 61 REDPRDAFVSNTYNNIDELPHGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +N
Sbjct: 121 AGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H+DT D V CERA L+G C+ I +A G ++ +V DG G R
Sbjct: 181 HQDTADRVLCERAMNLTLEGGCQVPIGSYALLDGDEIWLRALVGEPDGSEIVRGEIKGAR 240
Query: 283 CDAINIG 289
DA N+G
Sbjct: 241 ADAENLG 247
>gi|225677334|ref|ZP_03788309.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590620|gb|EEH11872.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 292
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF +
Sbjct: 4 KIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L ++
Sbjct: 62 EIEAELLENNIDMAVHSLKDVPAFFSGGLTIPCVLERLSPCDAFISHKHNSLESLPQQAI 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 122 IATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++ SC +
Sbjct: 179 EVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIRVKSERSFMKTVNASCFT 238
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+A A + +LA + I+ R DA +G DA ++
Sbjct: 239 PLAALAEYVSENMLHLRCMLADEKNIYF-TERTSFIEDAEKMGMDAGLELK 288
>gi|16803596|ref|NP_465081.1| porphobilinogen deaminase [Listeria monocytogenes EGD-e]
gi|47096721|ref|ZP_00234306.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854]
gi|224501504|ref|ZP_03669811.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-561]
gi|254831957|ref|ZP_05236612.1| porphobilinogen deaminase [Listeria monocytogenes 10403S]
gi|254898277|ref|ZP_05258201.1| porphobilinogen deaminase [Listeria monocytogenes J0161]
gi|254912230|ref|ZP_05262242.1| porphobilinogen deaminase [Listeria monocytogenes J2818]
gi|254936558|ref|ZP_05268255.1| porphobilinogen deaminase [Listeria monocytogenes F6900]
gi|284801947|ref|YP_003413812.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578]
gi|284995089|ref|YP_003416857.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923]
gi|23821694|sp|Q8Y6X5|HEM3_LISMO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|16410985|emb|CAC99634.1| hemC [Listeria monocytogenes EGD-e]
gi|47014905|gb|EAL05853.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854]
gi|258609152|gb|EEW21760.1| porphobilinogen deaminase [Listeria monocytogenes F6900]
gi|284057509|gb|ADB68450.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578]
gi|284060556|gb|ADB71495.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923]
gi|293590205|gb|EFF98539.1| porphobilinogen deaminase [Listeria monocytogenes J2818]
Length = 309
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 162/283 (57%), Gaps = 9/283 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 178 WLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+L+G C+ IAGFA + F G+V +DG I E + G
Sbjct: 238 KKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG 280
>gi|116872985|ref|YP_849766.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123466350|sp|A0AJ05|HEM3_LISW6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|116741863|emb|CAK20987.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 309
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 175/312 (56%), Gaps = 16/312 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKEQY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L + ID AVHS KD+P+ L +GL I A RE D F+ + SL DL
Sbjct: 60 LFVSEVEQALSNSTIDFAVHSMKDVPSSLEEGLVIGAIPKRESPLDCFVFNQVSSLDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL+ R D ++ RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 KGAIVGTSSLRRAAQLLKHRPDFNIRPIRGNIDTRLQKLHVENFDAIILAKAGLARMG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P+ GQGA+ IE ++ ++++ I+HE+T V ER FL
Sbjct: 178 WLENTTLKLEDIAPEVCLPAVGQGALAIECRESDQLIRDMLATIHHEETGICVEAERVFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFH--EVSRN----GNRCDAINIGR 290
+L+G C+ IAGFA G ++F G+V +DG KI E+ N GN+ + +
Sbjct: 238 KKLNGGCEIPIAGFATKIGEQIHFKGLVGNADGSKILESKEIGENPGQIGNKVAEVLLSE 297
Query: 291 DAAQYIRFISNK 302
A I + NK
Sbjct: 298 GAETIIEELRNK 309
>gi|329114337|ref|ZP_08243099.1| Porphobilinogen deaminase [Acetobacter pomorum DM001]
gi|326696413|gb|EGE48092.1| Porphobilinogen deaminase [Acetobacter pomorum DM001]
Length = 406
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 169/322 (52%), Gaps = 25/322 (7%)
Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
P R+GTR SPLAL AF T + L D+ H I +T GD++ NR L E
Sbjct: 88 PLRVGTRGSPLALVQTRAFLTTLTRFCPVLRDMGAFQEHQI-----NTTGDQVQNRRLAE 142
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTA 115
IGGKGLF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I A
Sbjct: 143 IGGKGLFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLA 202
Query: 116 QSLKD-----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
QS D L +++G +S+RR+A +L R D+ RG ++TRL+KL ++ A L
Sbjct: 203 QSDPDDPYSALPEGALVGCASVRRQAQMLHVRPDLQFGLLRGNVQTRLDKLAAHQCQATL 262
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG+KRL + +L+ P+ GQG + + ++ + +EL+ I +
Sbjct: 263 LALAGLKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDVELRELLSAIEDYEARAVA 322
Query: 231 NCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
ER+ LAELDGSC++ I G+A K L+ G+V DG + S G D
Sbjct: 323 TAERSLLAELDGSCRTPIGGYAQLLPAEEGKDPKLHLTGLVAREDGSFLLKRSITGMPED 382
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
A +G++ + +R S ++F
Sbjct: 383 AARLGKELGESLRKDSPSDIFE 404
>gi|240949414|ref|ZP_04753755.1| porphobilinogen deaminase [Actinobacillus minor NM305]
gi|240296163|gb|EER46819.1| porphobilinogen deaminase [Actinobacillus minor NM305]
Length = 308
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/268 (39%), Positives = 154/268 (57%), Gaps = 2/268 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A ++ L + H P I ++ + TKGD I + L +IGGKG
Sbjct: 2 KDTLRIATRQSPLALWQANFVKAEL-EKH-FPELQIELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQNLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 KGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L G
Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ I GFA + L +V + DG
Sbjct: 240 GCQVPIGGFATLENDELTLNALVGSLDG 267
>gi|323464250|gb|ADX76403.1| porphobilinogen deaminase [Staphylococcus pseudintermedius ED99]
Length = 309
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 173/292 (59%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKGLF +E
Sbjct: 6 VGSRRSQLALTQSQQFIDRLKEVD--PTLDIEIKEIVTKGDQIVDRQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L S +ID A+HS KD+P++L +GL + RE+ D FIS L +L S+I
Sbjct: 64 IQNELFSRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELPDGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ + ++
Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++GSC+
Sbjct: 184 TYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMNGSCQV 243
Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I G+A K T + F G++++ DGK E + +G D I +G + ++ ++
Sbjct: 244 PIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSGQ--DPIQVGSEVSRVLK 293
>gi|258511805|ref|YP_003185239.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478531|gb|ACV58850.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 305
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 160/287 (55%), Gaps = 6/287 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGK 61
+ R+ TR S LAL + ++D+ K H + ++P+ T+GD I +R L+E+GGK
Sbjct: 2 RTLRVATRRSALALTQT----NHVVDLLKQVAHGVEFELVPIRTRGDEIVDRALSEVGGK 57
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +IE L +G+ D AVHS KD+P +L GL I A PRED RD IS T Q L DL
Sbjct: 58 GLFVADIEDALATGQADLAVHSLKDVPFELRDGLTIGAVPPREDPRDALISRTGQGLFDL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR+A L R R D+ V RG ++TRL +L + AI+LA +G+ RL
Sbjct: 118 PPGARVGTSSLRRQAALRRLRPDLCVETLRGNVDTRLRRLEEGQFDAIVLAASGLHRLGL 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+
Sbjct: 178 AERITEYLPVDRFVPAVGQGALAIECRAEDDEVMRHLAAIADPDATRAVEAERAFLSRLE 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
GSC+ I +A G L V G ++ R G+ A+ +
Sbjct: 238 GSCQVPIGAYAEPVGHELRLIAFVADPSGIHHLQLERTGDEARALGV 284
>gi|296331638|ref|ZP_06874107.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675403|ref|YP_003867075.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151233|gb|EFG92113.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413647|gb|ADM38766.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 313
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 167/302 (55%), Gaps = 11/302 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 60 FVKEIEQALLNEDIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNHVKLSEMKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
+VIGTSSLRR A LL R DI++ RG I+TRL KL AI+LA AG+ R+ K+
Sbjct: 120 GAVIGTSSLRRSAQLLIERPDITIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L + P+ GQGA+ IE ++ + L E T +V ERA+L ++G
Sbjct: 180 DVVTEFLEPDRCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAYLNAMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAAQ 294
C+ IAG++ + + G+V + DGKI + + GN RC A+ + A +
Sbjct: 240 GCQVPIAGYSVLNEQDEIELTGLVTSPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKE 299
Query: 295 YI 296
I
Sbjct: 300 LI 301
>gi|62259213|gb|AAX77846.1| unknown protein [synthetic construct]
Length = 335
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 157/271 (57%), Gaps = 3/271 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+E K I +R S LAL ++ + IP I + T+GD I ++ L +IGG
Sbjct: 25 LEMKQITIASRESKLALWQTNFVKNRIQLELNIPCE---ISTMKTQGDIILDQPLNKIGG 81
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ D
Sbjct: 82 KALFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDD 141
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+
Sbjct: 142 LPKGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLE 201
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL
Sbjct: 202 LVERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQEL 261
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
G C AI +A + + +V +SDGK
Sbjct: 262 KGGCHVAIGAYAELDNNQITLMAMVASSDGK 292
>gi|33597222|ref|NP_884865.1| porphobilinogen deaminase [Bordetella parapertussis 12822]
gi|33601068|ref|NP_888628.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50]
gi|39931443|sp|Q7W785|HEM3_BORPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|39931458|sp|Q7WKM1|HEM3_BORBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33573649|emb|CAE37934.1| porphobilinogen deaminase [Bordetella parapertussis]
gi|33575503|emb|CAE32581.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50]
Length = 314
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 155/287 (54%), Gaps = 2/287 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF +E
Sbjct: 9 IATRASRLALWQAEHVRDLLR--ARYPACSVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL + +
Sbjct: 67 LETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I+
Sbjct: 127 GTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRA 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L D P+ GQGA+ IE + ++ + T V ERA L GSC+
Sbjct: 187 LLEPADSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+A +A G L +V A DG+ R G R A IG AA+
Sbjct: 247 LAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAAR 293
>gi|283851270|ref|ZP_06368553.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B]
gi|283573439|gb|EFC21416.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B]
Length = 310
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 163/300 (54%), Gaps = 4/300 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A + L + + P + ++P+ TKGD+I + L ++GGKGLF +E
Sbjct: 7 IATRSSKLALWQANHVSARLRETY--PGLVVDLLPIKTKGDKILDVPLAKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G D AVHS KD+P + +GL + RED D +S L + +
Sbjct: 65 IEEALLDGRADLAVHSMKDVPAEQPQGLVVGIVPEREDPCDTLLSVAYAGFAALPAGARV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRRKA L+ R D+S+ID RG ++TR+ KL + AI++A AG+ RL
Sbjct: 125 GTSSLRRKAQLMALRPDLSIIDLRGNLDTRVGKLLDGLFDAIVVATAGLNRLGLTAPQAV 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L +F P+ QGA+ +E ++P+ ++ +H ++ D+V ER FLA L+G C+
Sbjct: 185 RLGPPEFLPAAAQGALGLEYRTDDPETAAMLAFFDHPESRDAVAAERGFLARLEGGCQVP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IA A G L G+V + G+ F + G R +A +G+ A+ + + K V
Sbjct: 245 IAAHATIDGDALALDGLVADPETGQTFRG-NVTGKRSEARALGQGLAESVLAMGAKAVLE 303
>gi|113868875|ref|YP_727364.1| porphobilinogen deaminase [Ralstonia eutropha H16]
gi|113527651|emb|CAJ93996.1| porphobilinogen deaminase [Ralstonia eutropha H16]
Length = 337
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 160/277 (57%), Gaps = 2/277 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 23 IASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLFVKE 80
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G D AVHS KD+P +L +G ++A + RED RD +S SL ++ +V+
Sbjct: 81 LEFAMDEGRADLAVHSLKDVPMELPEGFALTAVMEREDPRDALVSSAYASLDEMPAGTVV 140
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 141 GTSSLRREAALRSRYPQLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGERIRA 200
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ I+ P+ GQGA+ IE N P+ + + +NH+ T +V+ ERA L GSC+
Sbjct: 201 LIPIDVSLPAAGQGALGIEILANRPELAQWLAPLNHQPTALAVSAERAVSRMLGGSCQVP 260
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
+A A +G L V DG + +G D
Sbjct: 261 LAAHARWEGDQLKLDAFVALPDGTRAIRAAASGPAVD 297
>gi|16800659|ref|NP_470927.1| porphobilinogen deaminase [Listeria innocua Clip11262]
gi|23821696|sp|Q92BF8|HEM3_LISIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|16414078|emb|CAC96822.1| hemC [Listeria innocua Clip11262]
gi|313618766|gb|EFR90670.1| porphobilinogen deaminase [Listeria innocua FSL S4-378]
Length = 309
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 161/281 (57%), Gaps = 5/281 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL
Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
+VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R L
Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + E ++ E P+ GQGA+ IE + + +++ I+HE+T V ER FL +
Sbjct: 180 ENTSLKLEDISPELCLPAVGQGALAIECRETDLQICDMLASIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
L+G C+ IAGFA G +++F G+V +DG I E R G
Sbjct: 240 LNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG 280
>gi|257465324|ref|ZP_05629695.1| porphobilinogen deaminase [Actinobacillus minor 202]
gi|257450984|gb|EEV25027.1| porphobilinogen deaminase [Actinobacillus minor 202]
Length = 308
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 153/268 (57%), Gaps = 2/268 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A ++ L + H P I ++ + TKGD I + L +IGGKG
Sbjct: 2 KDILRIATRQSPLALWQANFVKAEL-EKH-FPELQIELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ QSL L
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQSLDKLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 KGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L G
Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ I GFA + L +V + DG
Sbjct: 240 GCQVPIGGFATLENDELTLNALVGSLDG 267
>gi|319651737|ref|ZP_08005863.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2]
gi|317396556|gb|EFV77268.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2]
Length = 311
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 161/283 (56%), Gaps = 4/283 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL S L + P + + TKGD+I + TL+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWVISQLKSID--PSFEFEVKEIVTKGDKILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ ++ EID AVHS KDMP L GL I + RED RD IS L DL S++
Sbjct: 64 IEQAMLDEEIDMAVHSMKDMPAVLPAGLTIGSIPEREDHRDALISKGHIKLNDLREGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL R D+ + RG I+TRL+KL + AI+LA AG+ R+ V+
Sbjct: 124 GTSSLRRGAQLLAQRPDLEIKWIRGNIDTRLSKLETEEYDAIILAAAGLSRMGWAADVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L E P+ GQGA+ IE ++ + + L+ +T +V ERAFL +++G C+
Sbjct: 184 EFLEPEVCVPAVGQGALSIECRESDKELRALLDKFTCSETNQTVRAERAFLHKMEGGCQV 243
Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
IAGFA + + G+V + DGK+ ++ + G+ + + +
Sbjct: 244 PIAGFATINETGEMELTGLVGSPDGKVIYKETLTGSDPEELGV 286
>gi|34581586|ref|ZP_00143066.1| porphobilinogen deaminase [Rickettsia sibirica 246]
gi|28262971|gb|EAA26475.1| porphobilinogen deaminase [Rickettsia sibirica 246]
Length = 351
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 164/293 (55%), Gaps = 24/293 (8%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL------ 176
Query: 186 KEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
E+ N E P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 177 -EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFL 235
Query: 238 AELDGSCKSAIAGFA-YCKGSTLYF----YGIVLASDGKIFHEVSRNGNRCDA 285
LD +C++ IA ++ Y + + Y V + + + NR DA
Sbjct: 236 EYLDANCRTPIAAYSQYLDANPRHLSKLAYREVFEGNAEALATAAYKSNRTDA 288
>gi|74318586|ref|YP_316326.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259]
gi|123772872|sp|Q3SFT5|HEM3_THIDA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|74058081|gb|AAZ98521.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259]
Length = 306
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 160/299 (53%), Gaps = 2/299 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R L ++H P + I+ ++T+GD+I + TL++IGGKGLF +E
Sbjct: 6 IASRESALAMWQAEHIRDRLRELH--PECKVNILGMTTRGDQILDVTLSKIGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L +GE D AVHS KD+P +L G +++ RED RD F+S+ L DL SV+
Sbjct: 64 LEVALAAGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPGSVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L ++V RG + TRL KL+ + AILLA AG+KRL IK
Sbjct: 124 GTSSLRREAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGARIKS 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++E+ P+ GQGA+ IE N ++ +N T V ER L GSC+
Sbjct: 184 LLSVEESIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSCQVP 243
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+ A K L G V DG F G+ D +G+ A + + V +
Sbjct: 244 LGAHASYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAVLD 302
>gi|317154529|ref|YP_004122577.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2]
gi|316944780|gb|ADU63831.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2]
Length = 310
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A + L H P + ++ + TKGD+I + L ++GGKGL
Sbjct: 2 KQLTIATRGSALALWQANHIKDRLEAEH--PGLTVHLLKIKTKGDKILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G AVHS KD+PT+L +GL++ RE D +S + L L
Sbjct: 60 FVKEIEEALLDGRAQLAVHSMKDVPTELPEGLEVGVIPEREASTDSLLSVKYEGLAGLPR 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR++ L R D+ + RG ++TR+ KL + AI++A AG+ RL+
Sbjct: 120 GAVVGTSSLRRQSQLATLRPDLKIESLRGNLDTRVRKLLAGEFDAIVVATAGLNRLELTA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
EIL DF P+ QGA+ IE H N + +++ +NHE + V ER FL LDG
Sbjct: 180 PKHEILGPPDFLPAVAQGALGIEYHSANAEVAAMLQFLNHEPSKRQVLAERGFLTGLDGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA ++ G L G V DG ++ G +A +IG A+ + K
Sbjct: 240 CQVPIAAWSVIDGERLRLTGFVADVDGSRPIRMTAEGPVDNAWDIGAALAEKVLAAGGKA 299
Query: 304 VFN 306
+ +
Sbjct: 300 ILD 302
>gi|225023639|ref|ZP_03712831.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC
23834]
gi|224943521|gb|EEG24730.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC
23834]
Length = 312
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A +S L ++ P + I+ L+T+GDRI ++TL++IGGKGLF +E
Sbjct: 8 IASRESALAMWQAEHIQSRLRTLY--PGCEVSILGLTTQGDRILDKTLSKIGGKGLFVKE 65
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L G D AVHS KD+P L +G ++A RE D F+S+ Q L+DL +V+
Sbjct: 66 LEQALSDGRADLAVHSIKDVPMVLPEGFALAAICERESPFDAFVSNNYQRLEDLPAGAVV 125
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + V RG ++TRL KL+ AI+LA AG+KRL + I+
Sbjct: 126 GTSSLRREAQLRARFPQLQVAPLRGNVQTRLAKLDQGDYAAIILAEAGLKRLGLTQRIRH 185
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+ D P+ GQGA+ IE + + L+ +NH T V ERA L GSC+
Sbjct: 186 TLSPADSLPAAGQGALGIEIAAHRSELLPLLAPLNHAQTAACVTAERALARALGGSCQVP 245
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A + + L +G+V DG + R A +GR A+ +
Sbjct: 246 LAAYCTKQDGLLTLHGLVGHPDGSVILREEAQAPREYADALGRAVAKKL 294
>gi|102139876|gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 328
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 161/301 (53%), Gaps = 32/301 (10%)
Query: 11 RCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
R S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI
Sbjct: 54 RDSDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEI 113
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+ G ID AVHS KD+PT L +G + LP
Sbjct: 114 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLP-------------------------- 147
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
+SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + I
Sbjct: 148 -ASLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSI 206
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ I
Sbjct: 207 LSMEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPI 266
Query: 249 AGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNKNVF 305
A +A+ K + F G++ + DG +E +R G D + +G+DA ++ + +
Sbjct: 267 AAYAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFY 326
Query: 306 N 306
+
Sbjct: 327 D 327
>gi|297537269|ref|YP_003673038.1| porphobilinogen deaminase [Methylotenera sp. 301]
gi|297256616|gb|ADI28461.1| porphobilinogen deaminase [Methylotenera sp. 301]
Length = 319
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 164/290 (56%), Gaps = 4/290 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFTE 66
I +R SPLA+ A +S L ++ P IV I+ ++T GD+I + L ++GGKGLF +
Sbjct: 17 IASRESPLAMWQALHIQSRLQALY---PSTIVEILGMTTTGDQILDTPLAKVGGKGLFVK 73
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L G D AVHS KD+P L +G ++A RED RD F+S+ SL+DL S+
Sbjct: 74 ELETALEDGRADLAVHSMKDVPMNLPEGFMMAATGEREDPRDAFVSNDFNSLEDLPEGSI 133
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL I+
Sbjct: 134 VGTSSLRRQSQLQARLPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLSARIR 193
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+++ E P+ GQGA+ IE + N P ++ +NH DT V ERA L GSC
Sbjct: 194 NVISPELSIPAVGQGALGIEINANRPDLLAVLAPLNHPDTQVCVEAERAMSRALAGSCTV 253
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A CKG + G V + DGK + NGNR A +G+ A +
Sbjct: 254 PLGAYATCKGEEISITGFVASVDGKQMLIETANGNRNQADALGKALANQL 303
>gi|149921672|ref|ZP_01910121.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1]
gi|149817516|gb|EDM76986.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1]
Length = 322
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 161/310 (51%), Gaps = 4/310 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ + R+GTR S LAL A R L+ + ++ + TKGDR+T+R L ++GG
Sbjct: 6 LAARKLRLGTRGSALALWQANMIRDRLLAAWGAQGLEVELVRVVTKGDRVTDRPLNQVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SL 118
GLF + +E KL++GEID AVHS KDMP L +GL +++ R D RD F++ + +L
Sbjct: 66 MGLFVKGLEDKLLAGEIDFAVHSMKDMPGTLPEGLTLASTPERADPRDAFLAAPGRDVTL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L S +GTSSLRR AL R + ++ RG + TR+ K+ + A+LLA AG+ R
Sbjct: 126 ATLPAGSRLGTSSLRRGALAKRINPGLEIVPIRGNVPTRMGKIAEGEVDAVLLAAAGLDR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L K + I E L+ + F P+ QG + IE + L + + H T ER++LA
Sbjct: 186 LGKGEAITERLDPDAFMPAACQGVLAIELRAADTDIAALFEPLGHGPTSIVAAAERSYLA 245
Query: 239 ELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C+ +A A G + G+V+ DG + G DA +G A+ +
Sbjct: 246 TLQGGCQVPLACHARLSEDGRRVRVEGLVVEPDGSTVYASEAEGPVADAAQLGAGVAREV 305
Query: 297 RFISNKNVFN 306
+ V +
Sbjct: 306 LAAGGQGVID 315
>gi|307546845|ref|YP_003899324.1| porphobilinogen deaminase [Halomonas elongata DSM 2581]
gi|307218869|emb|CBV44139.1| porphobilinogen deaminase [Halomonas elongata DSM 2581]
Length = 380
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 157/269 (58%), Gaps = 4/269 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LA+ A R LM+VH P + ++ LST+GD+I + L ++GGKGL
Sbjct: 72 QTLRIATRKSQLAMWQAEHVRDRLMEVH--PELTVELVALSTRGDQILDTPLAKVGGKGL 129
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++ G D AVHS KD+P + + L +S L + D F+S+ SL +L
Sbjct: 130 FVKELEEAMLDGRADIAVHSMKDVPMQFPESLGLSVILAGAEPTDAFVSNQYASLDELPE 189
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRR + R D+ V++ RG ++TRL KL+N + AILLA AG+KRL E+
Sbjct: 190 GARIGTSSLRRGLQMRERRPDLEVLNLRGNVQTRLGKLDNGEFDAILLATAGLKRLGLEE 249
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + L E P+ GQGA+ IE +++ + L+ ++ DT V ERA L+G
Sbjct: 250 RITQELPPEICLPACGQGALGIECRMHDAELIGLLAPLDDPDTATRVRAERAMNTRLEGG 309
Query: 244 CKSAIAGFAYCK--GSTLYFYGIVLASDG 270
C+ IAG A + G TL+ +V +G
Sbjct: 310 CQVPIAGHAVFENDGQTLWLRALVGNPEG 338
>gi|89255577|ref|YP_512938.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
LVS]
gi|156501520|ref|YP_001427585.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167010342|ref|ZP_02275273.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FSC200]
gi|187932192|ref|YP_001892177.1| porphobilinogen deaminase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254368575|ref|ZP_04984591.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica FSC022]
gi|290954410|ref|ZP_06559031.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
URFT1]
gi|295312152|ref|ZP_06802958.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
URFT1]
gi|123401648|sp|Q2A5R3|HEM3_FRATH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217773|sp|A7N9H6|HEM3_FRATF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058914|sp|B2SE34|HEM3_FRATM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89143408|emb|CAJ78581.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica LVS]
gi|156252123|gb|ABU60629.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121478|gb|EDO65669.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica FSC022]
gi|187713101|gb|ACD31398.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 300
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266
>gi|238650859|ref|YP_002916714.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic]
gi|259646264|sp|C4K265|HEM3_RICPU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238624957|gb|ACR47663.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic]
Length = 351
Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 164/293 (55%), Gaps = 24/293 (8%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL------ 176
Query: 186 KEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
E+ N E P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 177 -EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFL 235
Query: 238 AELDGSCKSAIAGFA-YCKGSTLYF----YGIVLASDGKIFHEVSRNGNRCDA 285
LD +C++ IA ++ Y + + Y V + + + NR DA
Sbjct: 236 EYLDANCRTPIAAYSQYLDANPRHLSKLAYREVFEGNTEALATAAYKSNRTDA 288
>gi|297183175|gb|ADI19316.1| porphobilinogen deaminase [uncultured delta proteobacterium
HF0500_03A04]
Length = 315
Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 148/266 (55%), Gaps = 2/266 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A +S + H P + ++ + TKGDRI +R L+++GGKGLF
Sbjct: 5 LRIATRGSRLALWQANWVKSQIEQNH--PGQTVELVIVQTKGDRIQDRPLSQVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L D AVHS KD+ ++ +GL + RED RD ++ S +L +
Sbjct: 63 KELEGSLFREAADLAVHSLKDVTGEVPEGLALPVVTAREDFRDALVAPRHGSFCELPSGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR A LL R D+ RG +ETRLNK+++ A LLA AG+KRL+ E I
Sbjct: 123 VVGTSSLRRAAQLLHLRPDLETQPIRGNVETRLNKVDSGAFDATLLAVAGLKRLELELRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ E P+ GQG + +E ++P EL++ + + T ER L L+G+C+
Sbjct: 183 TEVFPPEMLLPALGQGVLGLEIRADDPATLELIQPLQDKTTALCCQAERRLLERLEGNCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
+AG G L G +LA DG+
Sbjct: 243 VPLAGLCERCGERLLLRGQLLAPDGQ 268
>gi|194290490|ref|YP_002006397.1| porphobilinogen deaminase [Cupriavidus taiwanensis LMG 19424]
gi|193224325|emb|CAQ70336.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Cupriavidus taiwanensis LMG 19424]
Length = 336
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 152/263 (57%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 23 IASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLFVKE 80
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G D AVHS KD+P +L G ++A + RED RD +S SL ++ +V+
Sbjct: 81 LEFAMDEGRADLAVHSLKDVPMELPPGFTLAAVMEREDPRDALVSSAYASLDEMPPGTVV 140
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + V RG ++TRL KL+ + AI+LA AG+KRL I+
Sbjct: 141 GTSSLRREAALRSRYPHLVVKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDRIRA 200
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ +E P+ GQGA+ IET P+ E + +NH+ T +V ERA L GSC+
Sbjct: 201 LIPLEASLPAAGQGALGIETLSTRPELAEWLAPLNHQPTALAVTAERAVSRRLGGSCQVP 260
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A G L V DG
Sbjct: 261 LAAHARWDGDQLRLEAFVALPDG 283
>gi|157828627|ref|YP_001494869.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933343|ref|YP_001650132.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa]
gi|189028152|sp|B0BY00|HEM3_RICRO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028153|sp|A8GSI6|HEM3_RICRS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157801108|gb|ABV76361.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908430|gb|ABY72726.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa]
Length = 351
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 164/293 (55%), Gaps = 24/293 (8%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL------ 176
Query: 186 KEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
E+ N E P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 177 -EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFL 235
Query: 238 AELDGSCKSAIAGFA-YCKGSTLYF----YGIVLASDGKIFHEVSRNGNRCDA 285
LD +C++ IA ++ Y + + Y V + + + NR DA
Sbjct: 236 EYLDANCRTPIAAYSQYLDANPRHLSKLAYREVFEGNTEALATAAYKSNRTDA 288
>gi|46907786|ref|YP_014175.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093092|ref|ZP_00230869.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858]
gi|226224157|ref|YP_002758264.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria
monocytogenes Clip81459]
gi|254824385|ref|ZP_05229386.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194]
gi|254852180|ref|ZP_05241528.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503]
gi|254931496|ref|ZP_05264855.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262]
gi|254993453|ref|ZP_05275643.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-064]
gi|300764778|ref|ZP_07074768.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017]
gi|55976452|sp|Q71ZB2|HEM3_LISMF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|259647801|sp|C1KVK3|HEM3_LISMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46881055|gb|AAT04352.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018532|gb|EAL09288.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858]
gi|225876619|emb|CAS05328.1| Putative porphobilinogen deaminase (hydroxymethylbilane synthase)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|258605484|gb|EEW18092.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503]
gi|293583048|gb|EFF95080.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262]
gi|293593620|gb|EFG01381.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194]
gi|300514454|gb|EFK41511.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017]
gi|328465591|gb|EGF36820.1| porphobilinogen deaminase [Listeria monocytogenes 1816]
gi|332311998|gb|EGJ25093.1| Porphobilinogen deaminase [Listeria monocytogenes str. Scott A]
Length = 309
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 160/276 (57%), Gaps = 9/276 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 178 WLENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+L+G C+ IAGFA ++F G+V +DG I
Sbjct: 238 KKLNGGCEIPIAGFATRANEVVHFKGLVGNADGSII 273
>gi|255521282|ref|ZP_05388519.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-175]
Length = 309
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 160/276 (57%), Gaps = 9/276 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVINPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 180 E--NTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+L+G C+ IAGFA ++F G+V +DG I
Sbjct: 238 KKLNGGCEIPIAGFATRANEVVHFKGLVGNADGSII 273
>gi|114568594|ref|YP_755274.1| porphobilinogen deaminase [Maricaulis maris MCS10]
gi|114339056|gb|ABI64336.1| porphobilinogen deaminase [Maricaulis maris MCS10]
Length = 321
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 161/277 (58%), Gaps = 15/277 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLM--------DVHKIPPHNIVIIPLSTKGDRITNRTL 55
+P I TR SPLAL A + ++ L D + P I+ L + GDRI +RTL
Sbjct: 6 RPLAIATRRSPLALVQARDVQAKLAAQCGLSGEDAERCFP----ILGLVSTGDRIQDRTL 61
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
E GGKGLFT+EI++ + G AVHS KD+PT L G+ + A L RED RD+ I+
Sbjct: 62 IEAGGKGLFTKEIDEAQLDGRAAFAVHSMKDVPTVLPDGIVLGALLEREDPRDMLIARDG 121
Query: 116 QS-LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
++ L DL IGT+SLRR+A LL R D+ V+ RG ++TRL KL + HA LA A
Sbjct: 122 ETRLADLPEGVTIGTASLRRQAQLLHKRPDLHVVPLRGNVDTRLGKLADGGIHATFLARA 181
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ RL + + +++ L ++ P+ QGA+ + + +A V ++H DT +V ER
Sbjct: 182 GLNRLGRAEALRDPLEADEMLPAAAQGAVGVAIRDGDEEAASYVAGLHHRDTELAVLAER 241
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
AFL ELDGSC++ IA A+ ++ F G VL DG+
Sbjct: 242 AFLFELDGSCRTPIA--AHVNKVSMDFIGEVLTPDGQ 276
>gi|262163679|ref|ZP_06031420.1| porphobilinogen deaminase [Vibrio mimicus VM223]
gi|262027895|gb|EEY46559.1| porphobilinogen deaminase [Vibrio mimicus VM223]
Length = 271
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 146/264 (55%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+T + DL +V+GT SLRR+ L R D+ + + RG + TRL+KL+
Sbjct: 61 REDPRDAFVSNTYAKIDDLPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL+ E I+ + E P+ GQGA+ IE +++ + +EL+ +N
Sbjct: 121 AGEYDAIILAAAGLKRLELESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H DT D V CERA L G C+ I +A G ++ +V DG G R
Sbjct: 181 HTDTADRVRCERAMNLTLQGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPR 240
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+A +G A+ + K +
Sbjct: 241 SEAEQLGITLAEQLLGQGAKEILE 264
>gi|254483263|ref|ZP_05096495.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148]
gi|214036486|gb|EEB77161.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148]
Length = 310
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 158/290 (54%), Gaps = 3/290 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A R +LM H P + ++ ++++GD++ + L ++GG
Sbjct: 1 MPTRTLTIATRESPLALWQAEYVRDALMSAH--PRLEVNLLGMTSRGDQLLDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED D F+S+ +SL
Sbjct: 59 KGLFVKELETALLDGSADIAVHSMKDVPMSFPEGLTLGVICEREDPTDAFVSNNFESLAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ V RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRECQLRARRPDLQVKFLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + ++++D P+ GQGA+ IE + EL++ ++H T V ERA L
Sbjct: 179 FGERIADSISVDDSLPAGGQGAVGIELREGDGDVLELLQTVHHPLTAQRVIAERAMNQRL 238
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ IA FA Y L G+V DG + DA N+G
Sbjct: 239 NGGCQVPIACFAEYLDNGHLRLRGLVGRPDGSEVLRAEAISSPEDAENLG 288
>gi|257059870|ref|YP_003137758.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802]
gi|256590036|gb|ACV00923.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802]
Length = 320
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 160/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KGL
Sbjct: 8 RSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E + ++D AVHS KD+PT L GL + R D D + H + L
Sbjct: 66 FTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNQKHLDKQLDT 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 LPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRLD 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL EL
Sbjct: 186 MSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R
Sbjct: 246 EGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLR 302
>gi|115314083|ref|YP_762806.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
OSU18]
gi|122325870|sp|Q0BP15|HEM3_FRATO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115128982|gb|ABI82169.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica OSU18]
Length = 300
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAILSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266
>gi|218246829|ref|YP_002372200.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801]
gi|218167307|gb|ACK66044.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801]
Length = 320
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 160/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KGL
Sbjct: 8 RSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E + ++D AVHS KD+PT L GL + R D D + H + L
Sbjct: 66 FTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNKKHLDKQLDT 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 LPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRLD 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL EL
Sbjct: 186 MSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R
Sbjct: 246 EGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLR 302
>gi|291279209|ref|YP_003496044.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1]
gi|290753911|dbj|BAI80288.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1]
Length = 305
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 168/300 (56%), Gaps = 7/300 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A +S + H I ++ + + T GD+I + L +IGGKGLF +E
Sbjct: 6 IGTRGSKLALWQANHIKSLIESTHHI---DVELKIIKTTGDKILDTPLAKIGGKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE++L++ +D AVHS KD+P +L GL++ + RE+ D F+S SL +L +VI
Sbjct: 63 IEEELLNKNVDIAVHSMKDVPVELPDGLEVGVFPVREEPYDAFLSVKYNSLDELPDGAVI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRRK L+R + + D RG ++TR+ KL + AI+LA AG+KRL + +K+
Sbjct: 123 GTSSLRRKIQLMRKYPHLVIKDLRGNVDTRIRKLTEGQYDAIILAKAGLKRLGLLEHVKQ 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ P+ QG + IE ++ Q+++ +NHE+T ERAFL L+G C+
Sbjct: 183 TIDDTLMIPAVCQGTLGIEYREDDQDVQKVIGFLNHEETVFRTKAERAFLKRLEGGCQVP 242
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A G L G + DG I+ E+ G++ DA+ +G A+ I K +
Sbjct: 243 LGCIANLVGDRLILKGFLANLDGSKYIYEEIE--GDKTDAVKLGLKLAKNILGQGGKEII 300
>gi|313623622|gb|EFR93785.1| porphobilinogen deaminase [Listeria innocua FSL J1-023]
Length = 309
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 160/281 (56%), Gaps = 5/281 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL
Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
+VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R L
Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + E ++ E P+ GQGA+ IE + + ++ I+HE+T V ER FL +
Sbjct: 180 ENPSLKLEDISPELCLPAVGQGALAIECRETDLQICNMLASIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
L+G C+ IAGFA G +++F G+V +DG I E R G
Sbjct: 240 LNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG 280
>gi|134302637|ref|YP_001122606.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|158513860|sp|A4IZY4|HEM3_FRATW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134050414|gb|ABO47485.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 300
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFIKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266
>gi|323189475|gb|EFZ74755.1| porphobilinogen deaminase [Escherichia coli RN587/1]
Length = 286
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 148/263 (56%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296
R G DA +G A+ +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEEL 267
>gi|319892715|ref|YP_004149590.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162411|gb|ADV05954.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius
HKU10-03]
Length = 309
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 173/292 (59%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKGLF +E
Sbjct: 6 VGSRRSQLALTQSQQFIDRLKEVD--PTLDIEIKEIVTKGDQIVDRQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + +ID A+HS KD+P++L +GL + RE+ D FIS L +L S+I
Sbjct: 64 IQNELFNRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELPDGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ + ++
Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++GSC+
Sbjct: 184 TYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMNGSCQV 243
Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I G+A K T + F G++++ DGK E + +G D I +G + ++ ++
Sbjct: 244 PIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSGQ--DPIQVGSEVSRVLK 293
>gi|149376990|ref|ZP_01894744.1| porphobilinogen deaminase [Marinobacter algicola DG893]
gi|149358767|gb|EDM47237.1| porphobilinogen deaminase [Marinobacter algicola DG893]
Length = 313
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR S LAL A +S L +H + ++ + T+GD+I + L +IGG
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKSELERLHD--NVTVELVKIKTQGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ +++G D AVHS KD+P + +GL + A RED D F+S+ ++
Sbjct: 59 KGLFVKELEEAMLAGSADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNDYDNVNA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRTLRGNVNTRLAKLDAGDYQAIVLASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L P+ GQGA+ IE +++ + +++ ++H D+ D V ERA L
Sbjct: 179 FHDRIRYCLPDSISLPAVGQGALGIECRLDDAELIAMLEPLDHRDSSDRVKAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C+ IA +A + L+ G+V A DG V R + +GR+ A+ + +
Sbjct: 239 QGGCQVPIAAYALLEDNDMLWLRGLVGAVDGTQVFRVEGRAPRSEGERLGRELAEDLLAL 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|296532729|ref|ZP_06895413.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
gi|296266947|gb|EFH12888.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 166/319 (52%), Gaps = 26/319 (8%)
Query: 5 PFRIGTRCSPLALAHAFETRSSL-MDVHKIP---------PHNIVIIPLSTKGDRITNRT 54
P R+GTR SPLAL ++TR+ L + +H P H I +T GDRI ++
Sbjct: 56 PLRVGTRGSPLAL---WQTRTFLELVLHFCPVLRNAKAFEEHVI-----ATSGDRIQDKR 107
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--- 111
L +IGGKGLF +EI + L+ G ID AVHS KD+ T+L G+ ++ L RED RD +
Sbjct: 108 LADIGGKGLFAKEIHEALLDGRIDFAVHSLKDLETELPPGIVLACTLRREDARDTLVLGP 167
Query: 112 ----SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167
+ A + + IGT+SLRR+A LL R D+ V RG + +RL KL +
Sbjct: 168 GAADADPADPFSAIPAGARIGTASLRRQAQLLHARPDLKVEMIRGNVGSRLAKLAGGECD 227
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
LLA AG+KRL E +L+ E P+ GQG + + + + EL+ I
Sbjct: 228 GTLLALAGLKRLGLESHASVVLDAEAMVPAAGQGIVGVTVRAADTELHELLSGIEDRTAR 287
Query: 228 DSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
ERA LA LDGSC++ I G A G L+ G+V DG + S +G +A
Sbjct: 288 AVSRAERALLAALDGSCRTPIGGHARLLPGGELHLTGLVARPDGSFLLKRSLHGAAGEAE 347
Query: 287 NIGRDAAQYIRFISNKNVF 305
IGR+ + +R S ++F
Sbjct: 348 RIGRELGESLRADSPADIF 366
>gi|332701796|ref|ZP_08421884.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay]
gi|332551945|gb|EGJ48989.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay]
Length = 316
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 160/299 (53%), Gaps = 2/299 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A +S L++ H + ++ L T+GD+I + L ++GGKGLF +E
Sbjct: 7 IATRGSMLALWQAEHVKSMLVERHS--GLEVELLMLKTQGDKILDVPLAKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G D AVHS KD+PT+L +GL I RE+ D +S +L L +VI
Sbjct: 65 IEEALLDGRADLAVHSMKDVPTELPEGLIIGVTPKREEPADALLSVRYDNLAALPEGAVI 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS RR+A LL R D + RG + TRL KL + + AI+LA AG+ RL E
Sbjct: 125 GTSSFRRQAQLLMRRPDFEIKMLRGNVNTRLRKLMDGEYDAIVLAMAGLNRLGLSAPKME 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L DF P+ QG + IE ++ + +++ ++H +T V ER FL L+G C+
Sbjct: 185 VLGPPDFLPAVSQGVLGIEYRRDDAELADMLAFMDHPETRVRVQAERGFLTALEGGCQVP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IAG+A +G + G+V DG+ R+ A +G A+ + + +
Sbjct: 245 IAGYAEVRGDEVRLTGLVADLDGRRVIRRERSSPAGQAWELGETLAREVLDAGGREILE 303
>gi|85858418|ref|YP_460620.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB]
gi|123738772|sp|Q2LQU2|HEM3_SYNAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85721509|gb|ABC76452.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB]
Length = 306
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL + + L + P ++ I+ + T GD + L +IGGKGLF
Sbjct: 1 MKIGTRGSALALTQTRQIAARLQGQY--PEMHLEIVVIKTSGDIQKDVPLAKIGGKGLFI 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G +D AVHS KD+P +L +GLQI+A RED RDV IS + +L +
Sbjct: 59 KEIEEALLAGTVDLAVHSMKDLPAELPEGLQIAAVPRREDPRDVLISGICREFDNLPAGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT SLRR L WR D+ ++ RG ++TR+ K+ +++A AGI+R+ + +
Sbjct: 119 RIGTGSLRRSVQLRDWRPDLEIVPLRGNLDTRIRKVAQAALDGVVVAAAGIRRMGWAEKV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQG +C+ET + + + + + T V ERAFL L G C
Sbjct: 179 TQFIPTEKMLPAVGQGVLCLETREEDEDLKAGLAFLEDKRTRREVTAERAFLRRLGGGCT 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A FA +G L G+V + + + G+ A+++G + A+ +
Sbjct: 239 LPVAAFAEQRGDVLTIRGMVGSLNERTMIRQEIYGSVEQAVDLGTELAERL 289
>gi|257124843|ref|YP_003162957.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b]
gi|257048782|gb|ACV37966.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b]
Length = 322
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 171/315 (54%), Gaps = 22/315 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLSTKGDRIT 51
IGTR S LALA A + + L+ + K P I + + TKGD+
Sbjct: 8 IGTRGSILALAQAEKVKEMLIKKYDELRENENFCEIEGFDKKNPLEIELKVIVTKGDKDL 67
Query: 52 NRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108
R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + + RED RD
Sbjct: 68 -RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFPMREDNRD 126
Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
V +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL++ + A
Sbjct: 127 VLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKLDDGEYDA 186
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
I+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K + L+K+IN ++
Sbjct: 187 IVLAAAGLKRVGLENRITEYFDKDSFMPAPGQGILCIQCRENDNKIRHLLKIINDDEVTI 246
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
ER F DG C + I + +G+TL G+ + +IF EV GNR +
Sbjct: 247 MCKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGMFNDNGIRIFKEVE--GNRENPKET 304
Query: 289 GRDAAQYIRFISNKN 303
+ A+ I+ KN
Sbjct: 305 AQKLAEEIKKEEMKN 319
>gi|258541892|ref|YP_003187325.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01]
gi|256632970|dbj|BAH98945.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01]
gi|256636027|dbj|BAI01996.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-03]
gi|256639082|dbj|BAI05044.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-07]
gi|256642136|dbj|BAI08091.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-22]
gi|256645191|dbj|BAI11139.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-26]
gi|256648246|dbj|BAI14187.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-32]
gi|256651299|dbj|BAI17233.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654290|dbj|BAI20217.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-12]
Length = 357
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 169/322 (52%), Gaps = 25/322 (7%)
Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
P R+GTR SPLAL AF T + L D+ H I +T GD++ NR L E
Sbjct: 39 PLRVGTRGSPLALVQTRAFLTTLTRFCPVLRDMGAFQEHQI-----NTTGDQVQNRRLAE 93
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTA 115
IGGKGLF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I A
Sbjct: 94 IGGKGLFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLA 153
Query: 116 QSLKD-----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
QS D L ++IG +S+RR+A +L R D+ RG ++TRL+KL ++ A L
Sbjct: 154 QSDPDDPYSALPEGALIGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAAHQCQATL 213
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG+KRL + +L+ P+ GQG + + ++ + +EL+ I +
Sbjct: 214 LALAGLKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDIELRELLSAIEDYEARAVA 273
Query: 231 NCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
ER+ LAELDGSC++ I G+A + L+ G+V DG + S G D
Sbjct: 274 TAERSLLAELDGSCRTPIGGYAQLIPIVAGEDPKLHLTGLVAREDGSFLLKRSITGLPED 333
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
A +G++ + +R S ++F
Sbjct: 334 AARLGKELGESLRKDSPSDIFE 355
>gi|229586831|ref|YP_002845332.1| porphobilinogen deaminase [Rickettsia africae ESF-5]
gi|259646263|sp|C3PNS9|HEM3_RICAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|228021881|gb|ACP53589.1| Porphobilinogen deaminase [Rickettsia africae ESF-5]
Length = 351
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 152/255 (59%), Gaps = 19/255 (7%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL------ 176
Query: 186 KEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
E+ N E P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 177 -EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFL 235
Query: 238 AELDGSCKSAIAGFA 252
LD +C++ IA ++
Sbjct: 236 EYLDANCRTPIAAYS 250
>gi|294670387|ref|ZP_06735269.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307851|gb|EFE49094.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 312
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 166/293 (56%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL++IGGKGL
Sbjct: 5 KKLVIASRESMLAMWQAEHIKGRLKALY--PDCEVEILGMTTRGDQILDRTLSKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ L+++
Sbjct: 63 FIKELEQALQDGRADLAVHSIKDVPMELPEGFALAAIGERASPFDAFVSNQYARLEEMPE 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+A L +++ RG ++TRL+KL+N A++LA AG++RL +
Sbjct: 123 GAIVGTSSLRREAQLRAKFPHLTIQPLRGNVQTRLSKLDNGDYDAVILAAAGLQRLGLDS 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+EIL+ D P+ GQGA+ IE ++++ +NHE+T V ERA L GS
Sbjct: 183 RIREILSPADSLPAAGQGALGIEIAARRTDLADILRPLNHEETAACVTAERALARALGGS 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ +A + + L G+V DG + E S A +GR A+ +
Sbjct: 243 CQVPLAAYCVMEDGLLTLNGLVGHPDGSVIIEASAQAPDAYANALGRAVAKRL 295
>gi|124514859|gb|EAY56370.1| Porphobilinogen deaminase [Leptospirillum rubarum]
Length = 314
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 152/271 (56%), Gaps = 4/271 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P +IG+R S LAL A S + V + P +VI T GD I +R L+E+GG
Sbjct: 1 MLPTPLKIGSRGSELALWQARHVASLIESVSGVLPEIVVI---KTTGDIILDRQLSEVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K
Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLTREDPRDVFLSPHYPDIKS 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR A + R+D+ I RG + TR+ K+ AI+LA AG+ RL
Sbjct: 118 LPQKARVGTSSLRRLAQIREIRNDLEFIPLRGNVGTRIRKMEEGVVDAIILAGAGLLRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++E ++ P+ GQGA+ +E ++ LV+ ++ E T SV ER L L
Sbjct: 178 HANRVREWISPRVLLPAIGQGALGLEIRTDDETTGTLVRSLSDESTHLSVAAERGVLQSL 237
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDG 270
+G C+ IA +A + K TL G VL G
Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISG 268
>gi|268317443|ref|YP_003291162.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252]
gi|262334977|gb|ACY48774.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252]
Length = 312
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 168/299 (56%), Gaps = 7/299 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +GTR S LAL A RS ++ + ++ + + T GD I + L +IG
Sbjct: 1 MPEPTLILGTRGSALALRQATLIRS-FLEARGV---SVQVEIIRTTGDHIQDVPLAKIGA 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--AQSL 118
KGLFT+E+++ L+ G ID AVHS KD+PT++ +GL ++A R DVF++H A L
Sbjct: 57 KGLFTKELDQALLEGRIDLAVHSLKDLPTEMPEGLVVAAVPERAPPWDVFVAHPDFAGRL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+DL +V+ TSSLRR+A L WRSD+ V+ RG ++TRL KL H ++LA AG++R
Sbjct: 117 EDLPTGAVVATSSLRRQAQLRAWRSDLQVVPVRGNVDTRLRKLEAEGWHGLILAEAGLQR 176
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + +++ + E P+ GQGA+ + N + + L++ ++H T +V ERA L
Sbjct: 177 LGLLERVRQRIAPEILLPAVGQGALGVVCAEANRRVRALLQALHHAPTAAAVRAERALLH 236
Query: 239 ELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C+ +A A + TL G V++ DG+ E + G + +G A+ +
Sbjct: 237 ALQGGCQVPVAALAAVEADGTLVLRGRVVSLDGRQLVEGVQRGAMAEPEAVGEALAETL 295
>gi|134094241|ref|YP_001099316.1| porphobilinogen deaminase [Herminiimonas arsenicoxydans]
gi|133738144|emb|CAL61189.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Herminiimonas
arsenicoxydans]
Length = 317
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 159/277 (57%), Gaps = 2/277 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A R L ++ P I I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLALLY--PQCAIEILGMTTRGDQILDRTLSKVGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + D AVHS KD+P L +G ++A L RED RD F+S+ SL DL
Sbjct: 65 FVKELEVAIAERRADLAVHSLKDVPMSLPEGFALAAVLEREDPRDAFVSNDYASLDDLPD 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+AL+ + + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 GAIVGTSSLRRQALIAARYPKLVIRPLRGNLDTRLGKLDKGEYAAIILAAAGLKRLGMPQ 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L+ E P+PGQGA+ IE H + QE + +NHE T +V ER GS
Sbjct: 185 RIRAVLDPEQSLPAPGQGAMGIEIHADRADLQEWLAPLNHEATAQAVTAERTVSRNFGGS 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
C+ +A FA + T+ ++ DGK NG
Sbjct: 245 CQIPLAAFATIENGTMRLRAMIATPDGKRVARADLNG 281
>gi|158520980|ref|YP_001528850.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3]
gi|226740631|sp|A8ZWG5|HEM3_DESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158509806|gb|ABW66773.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3]
Length = 310
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 157/294 (53%), Gaps = 7/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ L K I+P+ T+GD++ N + +IG KG+FT
Sbjct: 3 IRIGSRKSSLAMWQTCYVEDKL----KQSGITTSILPIDTRGDQVLNVAIAKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124
EE+E KL G+ID AVHSAKDMP+ L G ++ A+ RE+ DV +SH + D +
Sbjct: 59 EELEAKLADGDIDIAVHSAKDMPSVLPDGFELIAFTDREEPADVLVSHKKDLDISDSSRP 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RR+ALL R+ + +D RG ++TR+ K+ AIL+AYAGI R+ + +
Sbjct: 119 VTIGTSSVRRQALLGRFYPHVRTVDIRGNVQTRVLKMKEGLCDAILMAYAGIHRMGMDDL 178
Query: 185 IKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + + F P GQG I +E + + K + + INH + + ERAFL L+G
Sbjct: 179 IVHTFSPDTFIPPVGQGCIAVEASSRLAAEKKEAIRACINHPASETCLLAERAFLKRLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C A G L G +++ DGK F +R G A IG D ++
Sbjct: 239 GCSIPAFALARLNGDRLTLSGGLMSLDGKKFIFNTRAGAGSQATAIGTDLGNHV 292
>gi|328676207|gb|AEB27077.1| Porphobilinogen deaminase [Francisella cf. novicida Fx1]
Length = 300
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGK 266
>gi|85374658|ref|YP_458720.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594]
gi|84787741|gb|ABC63923.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594]
Length = 292
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 147/254 (57%), Gaps = 3/254 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD+I +R L EIGGK L+T+E++ L G
Sbjct: 1 MAQAVETRNRLCAAHGWDEEAVELVPVVASGDKIQDRPLAEIGGKALWTKELDAWLGEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T + L I+A LPRED RDV + A ++D+ + +GTS+ RR A
Sbjct: 61 IDAAVHSMKDVETFRPEALHIAAILPREDKRDVLVG--AAGIEDIPKGAKVGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L R D+ V+ FRG + TRL KL +A LLA AG+KRL E I L ++++ P
Sbjct: 119 QMLSLRPDVEVVTFRGNVATRLGKLEAGEADVTLLAAAGLKRL-GELDIGSPLELDEWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QGAI IE ++ A+ L+ I+H + + ERA LA L+G+C S IA A G
Sbjct: 178 AAAQGAIGIECRADDAGARALLSPIDHAPSRAEIMAERALLAGLNGTCHSPIAVLAEAMG 237
Query: 257 STLYFYGIVLASDG 270
+ L + + DG
Sbjct: 238 NRLSIRATLYSPDG 251
>gi|56707415|ref|YP_169311.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669886|ref|YP_666443.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
FSC198]
gi|224456493|ref|ZP_03664966.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370888|ref|ZP_04986893.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
tularensis FSC033]
gi|254874253|ref|ZP_05246963.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|61213244|sp|Q5NI31|HEM3_FRATT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123169616|sp|Q14JI3|HEM3_FRAT1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56603907|emb|CAG44892.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320219|emb|CAL08275.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis FSC198]
gi|151569131|gb|EDN34785.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
tularensis FSC033]
gi|254840252|gb|EET18688.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158558|gb|ADA77949.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis NE061598]
Length = 300
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQLELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266
>gi|319763492|ref|YP_004127429.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
gi|317118053|gb|ADV00542.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
Length = 309
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 146/257 (56%), Gaps = 4/257 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A E +L+ H++ ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 9 PIVIATRESQLALWQA-EHVQALLAARG---HSVSLLGMTTRGDQILDRTLSKVGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L
Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACVMEREDPRDAFVSPHHASLDELPQG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC
Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244
Query: 245 KSAIAGFAYCKGSTLYF 261
+A G TL
Sbjct: 245 SMPLAAHGVWSGDTLRL 261
>gi|154148130|ref|YP_001406461.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381]
gi|166201500|sp|A7I1S0|HEM3_CAMHC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|153804139|gb|ABS51146.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381]
Length = 308
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 8/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL + ++ + + ++ + + + TKGD I + L +IGGKGLFT
Sbjct: 4 LRIATRGSALALWQSKYIQNLIENNTEV---EVELQSMKTKGDVILDTPLAKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ ++ GE D AVHS KD+P KGL ++A RED+RD F+S S +L +
Sbjct: 61 KELEESMLRGESDLAVHSLKDVPVVFPKGLILTAISEREDVRDSFVSEKFASFNELPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRRK LL R D+ +I RG I TRL KL N+ AI+LA AG+KRL + I
Sbjct: 121 KVGTTSLRRKMQLLIKRPDLKIISLRGNINTRLRKLKENEFDAIILASAGLKRLNLMENI 180
Query: 186 KEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
K + ++++ P+ GQGA+ IE V+ + E++K IN+E++ + ER F+A+L+G
Sbjct: 181 KYFVPFSLDEMIPAMGQGALGIEC-VDKSEVIEILKFINNENSVIATTIERDFVAKLNGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ I A G + IV DG F + R ++ D N G A FIS
Sbjct: 240 CQVPIGVNAEISGDIIKVRAIVGLPDGSEFIKDKREISKADFKNFGTKLAD--EFIS 294
>gi|87117968|gb|ABD20291.1| HemC [Shigella boydii]
Length = 272
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD
Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG I TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE
Sbjct: 119 IRSLRGNIGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A DG R G DA +G A+ +
Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268
>gi|114308050|gb|ABI59293.1| hydroxymethylbilane synthase [Nitrosomonas eutropha C91]
Length = 334
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 154/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IGGKGLF +E
Sbjct: 35 IASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGKGLFIKE 92
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P + G +++A RED RD F+S+ SL++L SV+
Sbjct: 93 LELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEELPTGSVV 152
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ I
Sbjct: 153 GTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISM 212
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+ GQGA+ IE N+P E +K ++H T V ERA L GSC+
Sbjct: 213 LIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLGGSCQVP 272
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+ GFA L G V DG
Sbjct: 273 LGGFAEIFEGVLTLRGFVATPDG 295
>gi|87117964|gb|ABD20289.1| HemC [Shigella boydii]
gi|87117966|gb|ABD20290.1| HemC [Shigella boydii]
gi|87117982|gb|ABD20298.1| HemC [Shigella boydii]
gi|87117986|gb|ABD20300.1| HemC [Shigella boydii]
gi|87117990|gb|ABD20302.1| HemC [Shigella boydii]
gi|87117994|gb|ABD20304.1| HemC [Shigella boydii]
gi|87118012|gb|ABD20313.1| HemC [Shigella dysenteriae]
Length = 272
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD
Sbjct: 1 LMTSH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE
Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A DG R G DA +G A+ +
Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268
>gi|269468208|gb|EEZ79901.1| porphobilinogen deaminase [uncultured SUP05 cluster bacterium]
Length = 304
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A ++ L H P NI ++ ++T+GD+I N L++IGGKGL
Sbjct: 3 KTLKIATRKSPLALWQAEHVKTRLETHH--PDLNIELVKMTTQGDQILNSPLSKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G D AVHS KDMP ++ +G + A L RE+ D F+S+ ++ DL
Sbjct: 61 FIKELEVGMMEGVADIAVHSMKDMPYEIPQGFALGAILKRENPFDAFVSNHFDNIDDLPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT S+RR L R D+ ++D RG + TRL KL++ + AI+LA AG+ RL E
Sbjct: 121 CAKVGTCSMRRIVQLKAIRPDLEILDLRGNVNTRLKKLDDGEYDAIILACAGLIRLGFED 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK+ ++ E P+ GQGA+ IE N+ + +L+ + +T V+ ERA +L+G
Sbjct: 181 RIKQQISPEQSLPAVGQGAVGIEIRENDQEILDLITPLIDVETTHRVSAERAMNEKLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C IAGF+ + + G+V D + G+ A +G + A + + ++
Sbjct: 241 CSVPIAGFSTIDNNQMTLTGLVGNVDTGTILKQQVCGDVAKAEALGVELADKLLSLGARD 300
Query: 304 VF 305
V
Sbjct: 301 VL 302
>gi|330824252|ref|YP_004387555.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601]
gi|329309624|gb|AEB84039.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601]
Length = 309
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 146/257 (56%), Gaps = 4/257 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A E +L+ H++ ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 9 PIVIATRESQLALWQA-EHVQALLAARG---HSVSLLGMTTRGDQILDRTLSKVGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L
Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACIMEREDPRDAFVSPHHASLDELPQG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC
Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244
Query: 245 KSAIAGFAYCKGSTLYF 261
+A G TL
Sbjct: 245 SMPLAAHGVWSGDTLRL 261
>gi|155241760|gb|ABT18042.1| porphobilinogen deaminase [Heliobacillus mobilis]
Length = 314
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 162/305 (53%), Gaps = 3/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL + L ++ P + + TKGD+I + L +IG KG
Sbjct: 5 QRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKIGDKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L L
Sbjct: 63 LFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHG-GLDALP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ RL
Sbjct: 122 QGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRLGWA 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + ++ P+ GQG+I IE + + ++V +NH +T S+ ERA + L+G
Sbjct: 182 EKISQYIPVDMCLPAVGQGSIGIEIREGDDEIAKIVGALNHYETSVSIRAERALMRTLEG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + L GIV + DGK G+ +G A+ + +
Sbjct: 242 GCQVPIGSLGRLQEGRLVLDGIVASLDGKHVARGREEGDPSQPEEVGIRLAEQLLQQGAR 301
Query: 303 NVFNF 307
+ N
Sbjct: 302 EILNV 306
>gi|94501432|ref|ZP_01307951.1| porphobilinogen deaminase [Oceanobacter sp. RED65]
gi|94426397|gb|EAT11386.1| porphobilinogen deaminase [Oceanobacter sp. RED65]
Length = 310
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR S LAL A +S L H + ++ + T+GD+I + L +IGGKGLF
Sbjct: 4 LKIATRSSKLALWQAEFVKSELEKFHS--DLQVELVKIKTQGDKILDTPLAKIGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E +++G+ D AVHS KD+P + +GL +S RE D F+S+ Q DL +
Sbjct: 62 KELETAMLNGDADIAVHSMKDVPMEFPEGLGLSVICEREMPTDAFVSNHYQRFLDLPQGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ +L R D+ V RG ++TRL KL+ + AI+LA AG+ RL+ E+ +
Sbjct: 122 HVGTSSLRRQCQVLAARPDLKVSSLRGNVQTRLGKLDAGEFDAIILASAGLLRLELEERV 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E P+ GQGA+ IE +++ Q+L+ ++H DT V ERA L G C+
Sbjct: 182 AEHMSDEISLPAGGQGAVGIECRMDDEVTQKLLAPLHHSDTASRVYAERALNKRLQGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
IA +A L+ G+V + DG G A +G AA+
Sbjct: 242 VPIACYATLNDGELHLRGLVGSEDGSRIIRTEIRGPESQAEQLGIQAAE 290
>gi|296046581|gb|ADG86432.1| hydroxymethylbilane synthase [Francisella novicida]
Length = 317
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 160/298 (53%), Gaps = 4/298 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M++ RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG
Sbjct: 1 MKQTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L
Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238
Query: 241 DGSCKSAIA--GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I G G ++ G+V + DG E G + +G AQ +
Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQEL 296
>gi|258645838|ref|ZP_05733307.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470]
gi|260403210|gb|EEW96757.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470]
Length = 307
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 167/289 (57%), Gaps = 2/289 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A + + D + P + ++P++TKGD+I +R+L EIGGKGLF +E
Sbjct: 7 IATRESLLALWQAEHVKKRIEDTY--PEIQVELLPVTTKGDQILDRSLLEIGGKGLFIKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+EK L+ + D AVHS KDM + GL+++A RED RD F+S SL++L +V+
Sbjct: 65 LEKLLLEKKADIAVHSLKDMTAVIPDGLKLAAVTAREDPRDAFVSLEYGSLQELPEGAVV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A LL D+ + RG ++TRL L+ A++LA AG+KRL ++ I+
Sbjct: 125 GTSSLRRQAQLLHLWPDLQIKTLRGNVQTRLRHLDEGNYDAVILAAAGLKRLGLQERIQS 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ D P+ GQG + IET + + + E+++ I+ E + ERAFL ++ G CK
Sbjct: 185 YISTCDSIPAAGQGVMAIETRIGDDETMEIIQFIHDEKVASCIMAERAFLEKVGGDCKVP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A + + + DGK ++ S NG DA +G A+ +
Sbjct: 245 AGIYAVPFLGHIEAVAFIGSPDGKEMYKRSLNGQTQDAKQLGESLAEAL 293
>gi|319942681|ref|ZP_08016988.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B]
gi|319803764|gb|EFW00699.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B]
Length = 309
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 154/259 (59%), Gaps = 4/259 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLA+ A ++ L D + P + ++ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 9 IATRESPLAMWQALHVQALLRD--RYPGAEVELLGMTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E ++ G D AVHS KD+P +L +G ++ A RED RD F+S SL D+ + +
Sbjct: 67 LEAAMLEGRADLAVHSLKDVPMELPEGFELVAVSEREDPRDAFVSPKYASLDDMPAGARV 126
Query: 128 GTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
GT+SLRR+ L+LR R + V+ RG + TRL KL+ + A+++A AG+KRL I+
Sbjct: 127 GTASLRRE-LMLRMRYPHLEVLPVRGNVGTRLRKLDEGQFDALVMASAGLKRLGLGDRIR 185
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+I+ E P+PGQGA+ IE + K + + IN +T ERA L GSC+
Sbjct: 186 QIIPAEVSLPAPGQGALGIEIRKGDEKMEAALGFINSPETRACCMAERAVSRALGGSCQV 245
Query: 247 AIAGFAYCKGSTLYFYGIV 265
+A +A + L+ +V
Sbjct: 246 PLAAYAVVENGELWLRALV 264
>gi|87117974|gb|ABD20294.1| HemC [Shigella boydii]
gi|87117976|gb|ABD20295.1| HemC [Shigella boydii]
gi|87117978|gb|ABD20296.1| HemC [Shigella boydii]
gi|87117980|gb|ABD20297.1| HemC [Shigella boydii]
gi|87117984|gb|ABD20299.1| HemC [Shigella boydii]
gi|87117988|gb|ABD20301.1| HemC [Shigella boydii]
gi|87117992|gb|ABD20303.1| HemC [Shigella boydii]
gi|87117996|gb|ABD20305.1| HemC [Shigella boydii]
gi|87118006|gb|ABD20310.1| HemC [Shigella dysenteriae]
gi|87118010|gb|ABD20312.1| HemC [Shigella dysenteriae]
gi|87118016|gb|ABD20315.1| HemC [Shigella dysenteriae]
gi|87118020|gb|ABD20317.1| HemC [Shigella dysenteriae]
gi|87118036|gb|ABD20325.1| HemC [Shigella flexneri]
gi|87118042|gb|ABD20328.1| HemC [Escherichia coli]
gi|87118044|gb|ABD20329.1| HemC [Escherichia coli]
Length = 272
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD
Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE
Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A DG R G DA +G A+ +
Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268
>gi|313637685|gb|EFS03063.1| porphobilinogen deaminase [Listeria seeligeri FSL S4-171]
Length = 274
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 149/255 (58%), Gaps = 5/255 (1%)
Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE 104
TKGDRI + TL+++GGKGLF E+E+ L G ID AVHS KD+P+ + +GL I A RE
Sbjct: 7 TKGDRILDVTLSKVGGKGLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRE 66
Query: 105 DIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164
D F+ +T +S DL +VIGTSSLRR A +LR R D + RG I+TRL KL++
Sbjct: 67 SALDCFVFNTVESFHDLPTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDE 126
Query: 165 KAHAILLAYAGIKR---LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
AI+LA AG+ R L+ + E ++ E P+ GQGA+ IE N+ + +++ I
Sbjct: 127 NFDAIILAKAGLSRMGWLENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASI 186
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
+HE+T V ER FL +L+G C+ IAGFA + F G+V +DG G
Sbjct: 187 HHEETGICVEAERVFLKKLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAENIGE 246
Query: 282 RCDAINIGRDAAQYI 296
+ + IG A+ +
Sbjct: 247 --NPMTIGNQVAEAL 259
>gi|46199940|ref|YP_005607.1| porphobilinogen deaminase [Thermus thermophilus HB27]
gi|55980314|ref|YP_143611.1| porphobilinogen deaminase [Thermus thermophilus HB8]
gi|55976454|sp|Q72H57|HEM3_THET2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81600541|sp|Q5SLE8|HEM3_THET8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46197567|gb|AAS81980.1| porphobilinogen deaminase [Thermus thermophilus HB27]
gi|55771727|dbj|BAD70168.1| porphobilinogen deaminase [Thermus thermophilus HB8]
Length = 301
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 8/290 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LALA L + P I + T+GD+ + I F +E
Sbjct: 6 VGTRGSALALAQTRFVVERLKETW--PETEFKIRTIKTRGDQGASPREEAI-----FVKE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I++ L+S EID AVHS KD+PT+ +GL+I++ R+D RDVF+ A+ LKDL +V+
Sbjct: 59 IQEALLSREIDIAVHSLKDLPTESPRGLKIASVPRRQDPRDVFLGKAAKRLKDLPPGAVV 118
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL I E
Sbjct: 119 GTSSVRRKAQILALRPDLVVRDLRGNVDTRLAALGNGEYDGIVLAAAGLIRLDLRNRIDE 178
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+ + P+PGQGA+ +E + A+EL ++H ++ V ERAFL L C +
Sbjct: 179 FLDPGEVLPAPGQGALALEVREGDDLAEELCYALHHPPSYHRVRAERAFLRGLGAGCLAP 238
Query: 248 IAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ A+ + TL G++L DGK F G+ +A +G D A+ +
Sbjct: 239 VGALAHVEEDGTLRLEGVLLTPDGKSFIRAEIEGDVSEAEELGLDLARDV 288
>gi|162219161|ref|YP_747258.2| porphobilinogen deaminase [Nitrosomonas eutropha C91]
Length = 308
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 154/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IGGKGLF +E
Sbjct: 9 IASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGKGLFIKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P + G +++A RED RD F+S+ SL++L SV+
Sbjct: 67 LELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEELPTGSVV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ I
Sbjct: 127 GTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISM 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+ GQGA+ IE N+P E +K ++H T V ERA L GSC+
Sbjct: 187 LIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+ GFA L G V DG
Sbjct: 247 LGGFAEIFEGVLTLRGFVATPDG 269
>gi|223044144|ref|ZP_03614183.1| porphobilinogen deaminase [Staphylococcus capitis SK14]
gi|222442538|gb|EEE48644.1| porphobilinogen deaminase [Staphylococcus capitis SK14]
Length = 309
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 171/292 (58%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKKVD--PDLDIEIKEIVTKGDQIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L S++
Sbjct: 64 IQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTEGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+DGSC+
Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I G+A G + F G+++ DGK +E + G D + +G++ ++ ++
Sbjct: 244 PIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLK 293
>gi|87117998|gb|ABD20306.1| HemC [Shigella dysenteriae]
gi|87118030|gb|ABD20322.1| HemC [Shigella flexneri]
gi|87118032|gb|ABD20323.1| HemC [Shigella flexneri]
Length = 272
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD
Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE
Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A DG R G DA +G A+ +
Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268
>gi|149928342|ref|ZP_01916583.1| porphobilinogen deaminase [Limnobacter sp. MED105]
gi|149822927|gb|EDM82172.1| porphobilinogen deaminase [Limnobacter sp. MED105]
Length = 310
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 157/280 (56%), Gaps = 3/280 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LA+ A R L+ + + + I+ ++TKGD+I +R+L +IGGKGLF
Sbjct: 3 IRIASRESRLAMWQAEHVRDLLLALPGV--SGVEIVGMTTKGDQILDRSLAKIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + Q+ ++ RED D F+S+ SL DL +
Sbjct: 61 KELEYALLEGRADLAVHSGKDIPMDVDPEFQLLGFMTREDPHDAFVSNDYASLADLPAGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+G+SSLRR+A +L + V RG ++TRL KL++ + AI+LA AG+KRL I
Sbjct: 121 VVGSSSLRRQAQVLARYPHLKVEPLRGNLDTRLGKLDSGQYQAIVLAAAGLKRLGLHSRI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ D P+ GQGA+ +E + + ELVK + V+ ER+ L GSC+
Sbjct: 181 RNVIESTDMLPAVGQGALGLEIRAGDSQLAELVKPLIDPVCTALVSAERSVSKALGGSCQ 240
Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
IAG+A T G+V + DGK E S + D
Sbjct: 241 VPIAGYATLNDAQTFTLRGLVASPDGKAVIEKSAQASLQD 280
>gi|58699644|ref|ZP_00374329.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58533839|gb|EAL58153.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 267
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 148/256 (57%), Gaps = 6/256 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF +
Sbjct: 4 KIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L +
Sbjct: 62 EIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQAT 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 122 IATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC +
Sbjct: 179 EVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCFT 238
Query: 247 AIAGFA-YCKGSTLYF 261
+A A Y + LY
Sbjct: 239 PLAALAEYVSENMLYL 254
>gi|315645740|ref|ZP_07898864.1| porphobilinogen deaminase [Paenibacillus vortex V453]
gi|315279218|gb|EFU42528.1| porphobilinogen deaminase [Paenibacillus vortex V453]
Length = 318
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 164/293 (55%), Gaps = 12/293 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + L + K ++ + + TKGDRI + TL+++GGKGLF
Sbjct: 6 VGSRQSALALTQTGQVIDDLKRLAKEHGLDYDFTVKKIVTKGDRILDVTLSKVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ GEID AVHS KDMP+ L +GL A R+D RD IS +L DL +
Sbjct: 66 KEIEQAMLDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGATLDDLPQGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+ E I
Sbjct: 126 KVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIVLATAGLQRMGWEDRI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL+G C+
Sbjct: 186 TSHLPVEISLPAVGQGALGIECRENDSELLHLLSLYNDEVTARTVAAERKFLSELNGGCQ 245
Query: 246 SAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I +A K + + G+V + DG+I + S G +++ +
Sbjct: 246 VPIGAYAILKNVDTGDSRGEQNVIQLTGMVGSPDGEIILKESAEGTDPESLGV 298
>gi|226311390|ref|YP_002771284.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599]
gi|259647803|sp|C0ZAH1|HEM3_BREBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226094338|dbj|BAH42780.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599]
Length = 309
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 160/284 (56%), Gaps = 3/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF
Sbjct: 4 WKVGTRRSKLALTQTNWVVDKLKGFA--PEADFELHEIVTKGDRILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L E D AVHS KDMP +L GL I A R D RDV +S ++L +L +
Sbjct: 62 KEIEQSLFDKETDFAVHSLKDMPAELPDGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR + +L +R DI + RG I+TR+ KL AI+LA AG++R+ E I
Sbjct: 122 LVGTSSLRRSSQILAYRPDIQIESLRGNIDTRMRKLAEGNFDAIILAAAGLERVNFEGEI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L +E P+ GQGA+ IE ++ + L+K + T +V+ ER+FL +L G C+
Sbjct: 182 SQFLPVEISLPAVGQGALAIECRADDEETLALLKQFDDAPTRLAVSAERSFLHKLQGGCQ 241
Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I +A + + + G+V + DGK + + G A+ I
Sbjct: 242 VPIGAYATVGENNEITLTGMVGSPDGKQMFKNTATGQDPLALGI 285
>gi|91205161|ref|YP_537516.1| porphobilinogen deaminase [Rickettsia bellii RML369-C]
gi|157827501|ref|YP_001496565.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389]
gi|122990935|sp|Q1RJN7|HEM3_RICBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217782|sp|A8GXC8|HEM3_RICB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91068705|gb|ABE04427.1| Porphobilinogen deaminase [Rickettsia bellii RML369-C]
gi|157802805|gb|ABV79528.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389]
Length = 300
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 155/252 (61%), Gaps = 11/252 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRTLTEIGGK 61
RIGTR S LAL T+++L+ + +I H N I+ ++T GD I N+ L +IGGK
Sbjct: 5 IRIGTRKSKLAL-----TQTNLV-IEQIKQHFPNINCEIVEITTSGDLIQNKPLYDIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LF +EIE+ L++ ++D AVHS KD+P + K L I A L RED RDVF+ T +S+++L
Sbjct: 59 ALFLKEIEQALLNKKVDLAVHSLKDVPGIIPKDLSIEAVLEREDSRDVFVCLTHKSIEEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++VIGTSS+RRK + R R D+ +I FRG +++R+NKL N + A +LAYAG+KRL
Sbjct: 119 PKNAVIGTSSVRRKLCVQRMRPDLEIIVFRGNVDSRINKLINKEVDATILAYAGLKRLNA 178
Query: 182 -EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ P GQG I IE ++ E+ K INH T++ + ERA L L
Sbjct: 179 FNPEYCHLIEHSQMLPCIGQGVIAIEIRKDDHDMIEICKQINHLPTFELIKPERALLEYL 238
Query: 241 DGSCKSAIAGFA 252
D +C++ I ++
Sbjct: 239 DANCRTPIGAYS 250
>gi|118602764|ref|YP_903979.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|226740639|sp|A1AX51|HEM3_RUTMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118567703|gb|ABL02508.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 304
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 156/273 (57%), Gaps = 3/273 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L H P ++++ ++TKGD+I N L++IGGKGL
Sbjct: 3 KTLKIATRQSPLALWQAQNVKIRLEKHH--PDLTVILVEMTTKGDQILNSPLSKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G D AVHS KD+P ++ +G ++ A L RE+ D F+S+ S+ DL
Sbjct: 61 FIKELEVSMMKGITDIAVHSMKDVPYEIPQGFKLGAILKRENPFDAFVSNDFSSIDDLPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ +GT S+RR L R D+ ++D RG + TRL KL+ I+LA AG+ RL E
Sbjct: 121 NAKVGTCSIRRIVQLKAIRPDLKILDLRGNVNTRLKKLDKGGFDGIILACAGLIRLGFES 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK+ ++ + P+ GQG + IE N+ + +L+K + +T V+ ERA A L+G
Sbjct: 181 RIKQQISDQQSLPAVGQGVVGIEIRENDTEILDLIKPLIDVETTYMVSAERAMNARLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASD-GKIFHE 275
C IAGFA + G+V D G I E
Sbjct: 241 CSVPIAGFALIDNEQIMLTGLVGNVDTGVILKE 273
>gi|326574375|gb|EGE24318.1| porphobilinogen deaminase [Moraxella catarrhalis CO72]
gi|326575506|gb|EGE25431.1| porphobilinogen deaminase [Moraxella catarrhalis 101P30B1]
Length = 321
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IAGFA + L G V + DGK + ++ I + AA+ +
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294
>gi|218885688|ref|YP_002435009.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226740632|sp|B8DKW2|HEM3_DESVM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218756642|gb|ACL07541.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 317
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 160/299 (53%), Gaps = 8/299 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A +S + H P ++ ++ L T+GD I + L ++GGKGL
Sbjct: 2 KKLVIATRGSKLALWQAEHVKSCIEGQH--PGVSVELLVLKTRGDIILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D F+S SL L
Sbjct: 60 FVKEIEEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHDSLAALPH 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR++ LL R D++V+ RG ++TRL KL+ + AI++A AG+KRL
Sbjct: 120 GATVGTSSLRRQSQLLALRPDLNVVSLRGNVDTRLRKLSEGQFDAIIMATAGMKRLGLSA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E+L F P+ GQGA+ IE + EL+ + H T V ER FLA L G
Sbjct: 180 PRSEVLGPPAFLPAVGQGALGIEFRADRADLHELLAFMEHTPTRIRVEAERGFLAGLQGG 239
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRD-AAQYI 296
C+ IAG A G T G+V G + NG + A IG D AAQ +
Sbjct: 240 CQVPIAGHAVMTGDGTFALEGLVADLTGARVIRRTMNGVSAPDGAQARQIGLDLAAQLV 298
>gi|87117970|gb|ABD20292.1| HemC [Shigella boydii]
gi|87118022|gb|ABD20318.1| HemC [Shigella flexneri]
gi|87118024|gb|ABD20319.1| HemC [Shigella flexneri]
gi|87118026|gb|ABD20320.1| HemC [Shigella flexneri]
gi|87118028|gb|ABD20321.1| HemC [Shigella flexneri]
gi|87118034|gb|ABD20324.1| HemC [Shigella flexneri]
gi|87118038|gb|ABD20326.1| HemC [Shigella flexneri]
gi|87118040|gb|ABD20327.1| HemC [Shigella flexneri]
Length = 272
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD
Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE
Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A DG R G DA +G A+ +
Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268
>gi|330720492|gb|EGG98789.1| Porphobilinogen deaminase [gamma proteobacterium IMCC2047]
Length = 312
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 157/290 (54%), Gaps = 3/290 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR S LAL A ++ L H+ + I + T+GD+I + L ++GG
Sbjct: 1 MTNKLLRIATRGSQLALWQAEYVKARLEAAHENLQVELDI--MKTRGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL ++ RE D F+S+ S
Sbjct: 59 KGLFVKELETALLEKRADIAVHSMKDVPMEFPEGLGLAVICEREQPTDAFVSNHFASFDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R DI++ RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCHIRALRPDINIEFLRGNVNTRLAKLDDGQFDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+IE P+ GQGA+ +E V++ L+ V++ EDT V ERA L
Sbjct: 179 MGDRITEQLSIEQSLPAAGQGAVGVECRVDDKDTLALLSVLHDEDTSICVTAERAMNRHL 238
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ IAGFA +G +Y G+V DG G DA IG
Sbjct: 239 NGGCQVPIAGFAVLEEGGQVYLQGMVANPDGDEVLRAELRGPVADAEQIG 288
>gi|332089030|gb|EGI94141.1| porphobilinogen deaminase [Shigella boydii 3594-74]
Length = 287
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 147/263 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEEL 268
>gi|87118008|gb|ABD20311.1| HemC [Shigella dysenteriae]
gi|87118014|gb|ABD20314.1| HemC [Shigella dysenteriae]
Length = 272
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 149/270 (55%), Gaps = 2/270 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD
Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE
Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+ + + +EL+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLGDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A DG R G DA +G A+ +
Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268
>gi|326561756|gb|EGE12091.1| porphobilinogen deaminase [Moraxella catarrhalis 7169]
Length = 321
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IAGFA + L G V + DGK + ++ I + AA+ +
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294
>gi|314933825|ref|ZP_07841190.1| hydroxymethylbilane synthase [Staphylococcus caprae C87]
gi|313653975|gb|EFS17732.1| hydroxymethylbilane synthase [Staphylococcus caprae C87]
Length = 309
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 171/292 (58%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIYKLKKVD--PDLDIEIKEIVTKGDQIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L S++
Sbjct: 64 IQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTEGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+DGSC+
Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I G+A G + F G+++ DGK +E + G D + +G++ ++ ++
Sbjct: 244 PIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLK 293
>gi|225025796|ref|ZP_03714988.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353]
gi|224956880|gb|EEG38089.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353]
Length = 844
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 154/256 (60%), Gaps = 7/256 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +IGTR S LAL + + P + I+ + TKGD+I +++LT GGKG
Sbjct: 2 KNIIKIGTRKSKLALIQTDIVKDKIK--KAFPEIEVEIVKIDTKGDQILDKSLTSFGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT E+E +L+SG +D AVHSAKDMP +GL I A L R D+RD F++ T + L++L
Sbjct: 60 VFTAELEAELLSGAVDIAVHSAKDMPMDFPEGLGIGAVLDRADVRDTFVTTTGKKLEELE 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179
S++GTSSLRR+ L+ +++ RG ++TRL+KL + + I+LA AGI+RL
Sbjct: 120 PGSIVGTSSLRRELLIKEINPYVTIKLLRGNVQTRLSKLRDGQYDGIILAAAGIERLGYE 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K+E + + L+ + F P+ GQG + +E+ V + + E++ I+ E + ERAFL
Sbjct: 180 KEEGLHYQYLDPDVFLPAAGQGILAVESRVEDAEMAEILAAIHSEKAECLLMAERAFLKT 239
Query: 240 LDGSCKSAIAGFAYCK 255
+ GSC + A A C+
Sbjct: 240 IGGSCNAPAA--ALCR 253
>gi|291044525|ref|ZP_06570234.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|293397661|ref|ZP_06641867.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62]
gi|291011419|gb|EFE03415.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|291611607|gb|EFF40676.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62]
Length = 313
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 296
>gi|257453642|ref|ZP_05618932.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60]
gi|257449100|gb|EEV24053.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60]
Length = 319
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 152/268 (56%), Gaps = 2/268 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLAL A ++ L ++ P + ++P+ T+GD+I + L +IGGKGLF
Sbjct: 7 LNIATRQSPLALWQAEHIQARLQALY--PSLTVNLVPMVTQGDKILDTPLAKIGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L D AVHS KD+P L +GL + AY RE D FIS+ +SL L +
Sbjct: 65 KELEQALYEKRADIAVHSLKDVPMVLPEGLTLGAYCEREQPTDAFISNHYESLDALPQGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ + ++R D+ +I RG + TRL+KL+ + AI+LA +G+ RL I
Sbjct: 125 KLGTSSLRRQCQIQQYRPDLEIISLRGNVGTRLSKLDAGEYDAIILATSGLTRLGLTDRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ P+ GQGA+ IE ++ L+K +N E + V ERA L G C+
Sbjct: 185 RHELDTHISLPAVGQGALAIECRSDDADVLALLKPLNDEPSRLCVMAERAMNRHLQGGCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIF 273
IAGFA + ++ G V + DGK
Sbjct: 245 VPIAGFATIQDGQIHLQGRVGSVDGKTL 272
>gi|59800604|ref|YP_207316.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090]
gi|240013461|ref|ZP_04720374.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI18]
gi|240117279|ref|ZP_04731341.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
gi|240120532|ref|ZP_04733494.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID24-1]
gi|254493056|ref|ZP_05106227.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291]
gi|260441191|ref|ZP_05795007.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|268602974|ref|ZP_06137141.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
gi|59717499|gb|AAW88904.1| putative porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090]
gi|226512096|gb|EEH61441.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291]
gi|268587105|gb|EEZ51781.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
Length = 311
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 294
>gi|118496750|ref|YP_897800.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. novicida U112]
gi|194324057|ref|ZP_03057832.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida
FTE]
gi|208779979|ref|ZP_03247322.1| porphobilinogen deaminase [Francisella novicida FTG]
gi|158512415|sp|A0Q481|HEM3_FRATN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118422656|gb|ABK89046.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella novicida U112]
gi|194321954|gb|EDX19437.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida
FTE]
gi|208743983|gb|EDZ90284.1| porphobilinogen deaminase [Francisella novicida FTG]
Length = 300
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266
>gi|304320177|ref|YP_003853820.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503]
gi|303299080|gb|ADM08679.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503]
Length = 324
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 155/279 (55%), Gaps = 12/279 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIP--------PHNIVIIPLSTKGDRITN 52
M KP RI +R SPLA+A A R L + I PH + T GDR+ N
Sbjct: 1 MSFKPLRIASRRSPLAVAQALWVRDRLAEALGIDEVDRDAAFPHETFV----TTGDRMLN 56
Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
TL +IGGKGLFT+EIE L+ G+ D AVHS KDMP ++ GL ++A RED RD F++
Sbjct: 57 PTLADIGGKGLFTKEIEIALLDGQADIAVHSMKDMPAQMPPGLVLAAVPVREDPRDAFVT 116
Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172
+ L + + IGTSS RR+A L R R D++++ RG + TRL KL +A LA
Sbjct: 117 LDGRPLDQMPAGARIGTSSTRRRAQLARLRPDLALVPMRGNVGTRLQKLAAGEAEGTFLA 176
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG++RL V +E L+ P+ GQGA+C++ + + IN+ T +
Sbjct: 177 EAGLRRLGMTDVKREALSPARMLPALGQGALCVQARSGDHETLSACAHINNRPTALAAAA 236
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
ERA ++ LDGSCK+ I G A G +L G +L DG+
Sbjct: 237 ERALISGLDGSCKTPIGGLARQTGDSLILEGQILTPDGR 275
>gi|317052496|ref|YP_004113612.1| porphobilinogen deaminase [Desulfurispirillum indicum S5]
gi|316947580|gb|ADU67056.1| porphobilinogen deaminase [Desulfurispirillum indicum S5]
Length = 308
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 161/287 (56%), Gaps = 11/287 (3%)
Query: 8 IGTRCSPLALAHAFETRSSL---MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL A ++ L D ++ I+ TKGD+I + L ++GGKGLF
Sbjct: 5 IGTRASQLALWQAEHIKAELESRWDDVQVELKKII-----TKGDKILDSPLAKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE +LI G ID AVHS KD+PT+ +GL++ A RED RD FIS +S+ +L
Sbjct: 60 VKEIENELIDGTIDIAVHSMKDVPTEFPEGLELFAITEREDPRDAFISRNGKSMAELGQQ 119
Query: 125 S--VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IGTSSLRR+A LL +++ RG ++TRL ++ + I+LA AG+KRL+ E
Sbjct: 120 KDVTIGTSSLRRQAQLLTLYPHWNIVSIRGNVQTRLKRMEERQMDGIILAAAGMKRLELE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++KE + E P+ GQGA+ +E + +E ++ + H T V ERA L ++G
Sbjct: 180 HLVKEYIAPEVMIPAIGQGALGLEVRSADTALKERLEFLRHPVTTQCVLAERALLRTMEG 239
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
C+ I +A K +++ +V + DGK + GN + + +
Sbjct: 240 GCQVPIGAYAVPKENGSVFLNALVASVDGKEVVKGQLEGNNPEELGV 286
>gi|30248604|ref|NP_840674.1| porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718]
gi|39931498|sp|Q82WS2|HEM3_NITEU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30180199|emb|CAD84501.1| Porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718]
Length = 308
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 160/290 (55%), Gaps = 2/290 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A R L++++ P +I I+ ++TKGD+I + +L++IGGKGLF +E
Sbjct: 9 IASRESQLALWQANFIRGRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGKGLFIKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P + G ++A RED RD F+S+ SL++L SV+
Sbjct: 67 LELALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLEELPAGSVV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ I
Sbjct: 127 GTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISM 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L E P+ GQGA+ IE N+P E +K ++H T V ERA L GSC+
Sbjct: 187 LLPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRMLGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ GFA L G V DG G +G+ AQ ++
Sbjct: 247 LGGFAEIFEDVLTLRGFVATPDGSRMIADKLCGKPESGEQVGQQLAQNLK 296
>gi|88797646|ref|ZP_01113235.1| porphobilinogen deaminase [Reinekea sp. MED297]
gi|88779818|gb|EAR11004.1| porphobilinogen deaminase [Reinekea sp. MED297]
Length = 313
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 157/265 (59%), Gaps = 2/265 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A ++ L H P + ++ +STKGD+I + L+++GGKGLF
Sbjct: 5 VRIATRKSPLALWQAEFVKAELEKHH--PDLQVELVKISTKGDQILDVALSKVGGKGLFI 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + +GE D AVHS KD+P ++ G +++ RE+ D F+S+ S+ DL +
Sbjct: 63 KELEVAMEAGEADMAVHSMKDVPMEMPAGFELATICERENPFDAFVSNDFDSIDDLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A +L R D+ V RG + TRL KL++ + AI+LA AG+ RL + I
Sbjct: 123 VLGTSSLRRQAQILAHRPDLDVRFLRGNVGTRLGKLDDGEYQAIVLACAGLIRLDLQARI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + P+ GQGA+ IE + +E ++ ++HE+T V+ ERA L+G C+
Sbjct: 183 RQEIPGNLSLPAVGQGAVGIEIRAGDIALKERLQPLSHENTTLRVSAERAMNRVLNGGCE 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
IAG+A L G V A DG
Sbjct: 243 VPIAGYAVLDDQVLKLEGRVGAVDG 267
>gi|270158066|ref|ZP_06186723.1| porphobilinogen deaminase [Legionella longbeachae D-4968]
gi|289163669|ref|YP_003453807.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150]
gi|269990091|gb|EEZ96345.1| porphobilinogen deaminase [Legionella longbeachae D-4968]
gi|288856842|emb|CBJ10653.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150]
Length = 310
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 167/312 (53%), Gaps = 12/312 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A R L++ K P NI ++P++T GD+ L +GG
Sbjct: 1 MNSRIIRIATRQSPLALWQANYVRQLLLN--KWPKLNIELLPMTTSGDKFLKDKLLAVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS+KDMP + GL ++A R++ D +SH SL+
Sbjct: 59 KGLFVKELEEALLDKRADFAVHSSKDMPAEFPHGLCLAAICKRDNPFDALVSHHYTSLQT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++IGT+SLRR++ LL +RSD+ V RG I TRL KL + AI+LA +G++R+
Sbjct: 119 LPERAIIGTASLRRQSQLLAYRSDLCVKPLRGNINTRLEKLRAGEYQAIILAASGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
VI E L E P+ GQGA+ IE ++ + LV +N + V+ ER A+L
Sbjct: 179 FTHVITEQLPTEIMLPACGQGALAIECRTDDQETLALVAELNDPISSLCVHTERQVNAQL 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGK---------IFHEVSRNGNRCDAINIGR 290
G+C +A F + + L +L DG F + + +RC I +
Sbjct: 239 GGNCHIPLAVFCTPIEKNQLLLQAKILTIDGSQTIADTQMGSFAQATNMADRCSQSLIAQ 298
Query: 291 DAAQYIRFISNK 302
AA + +S +
Sbjct: 299 GAANLLASVSPR 310
>gi|326562302|gb|EGE12628.1| porphobilinogen deaminase [Moraxella catarrhalis 103P14B1]
gi|326563079|gb|EGE13352.1| porphobilinogen deaminase [Moraxella catarrhalis 12P80B1]
gi|326571711|gb|EGE21724.1| porphobilinogen deaminase [Moraxella catarrhalis BC8]
gi|326578075|gb|EGE27935.1| porphobilinogen deaminase [Moraxella catarrhalis O35E]
Length = 321
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IAGFA + L G V + DGK + ++ I + AA+ +
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294
>gi|172058146|ref|YP_001814606.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15]
gi|254800251|sp|B1YJV1|HEM3_EXIS2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|171990667|gb|ACB61589.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15]
Length = 308
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 146/246 (59%), Gaps = 3/246 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LA+ L P+ I + TKGDRI + TL+++GGKGLF +E
Sbjct: 6 VGSRSSKLAMTQTKWVIEQLKQAGA--PYEFEIKNIITKGDRILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+++I +ID AVHS KD+P++L GL I A R D RD I+ T L L +++
Sbjct: 64 IEQQMIDEDIDFAVHSMKDLPSELPTGLIIGATPSRVDARDALITTTGGGLDSLPEGAIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR + LL+ R D+ + RG I+TRL KL ILLA AG++R+ E ++
Sbjct: 124 GTSSLRRGSQLLKLRPDLKIESIRGNIDTRLEKLKTGPFDGILLAAAGLQRMGWSEDIVS 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E ++ +D P+ GQG + IE N+ + ++L+ +I+ + T ER+FLA ++GSC
Sbjct: 184 EYISTDDMIPAVGQGILAIECRANDQEVRDLLNLIHDQMTEKVAFAERSFLAAIEGSCHV 243
Query: 247 AIAGFA 252
+ GFA
Sbjct: 244 PVGGFA 249
>gi|157964647|ref|YP_001499471.1| porphobilinogen deaminase [Rickettsia massiliae MTU5]
gi|189028151|sp|A8F1Y8|HEM3_RICM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157844423|gb|ABV84924.1| Porphobilinogen deaminase [Rickettsia massiliae MTU5]
Length = 351
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 151/248 (60%), Gaps = 5/248 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCKIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EKV 184
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEAFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ ++ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLKICNQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFA 252
++ IA ++
Sbjct: 243 RTPIAAYS 250
>gi|268594132|ref|ZP_06128299.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|268596184|ref|ZP_06130351.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
gi|268547521|gb|EEZ42939.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|268549972|gb|EEZ44991.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
Length = 313
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 296
>gi|71278494|ref|YP_266842.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H]
gi|123733846|sp|Q48AW8|HEM3_COLP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71144234|gb|AAZ24707.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H]
Length = 317
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 158/298 (53%), Gaps = 4/298 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG
Sbjct: 1 MNNTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L
Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238
Query: 241 DGSCKSAIA--GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ I G G ++ G+V + DG E G + +G AQ +
Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQEL 296
>gi|167626913|ref|YP_001677413.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189028091|sp|B0TW04|HEM3_FRAP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167596914|gb|ABZ86912.1| Hydroxymethylbilane synthase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 300
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 166/291 (57%), Gaps = 5/291 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL + + I I + T+GD I ++ L +IGGK L
Sbjct: 2 KQIVIASRESKLALWQTNYVKDRIQQELNIRCQ---INTMKTQGDIILDKPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E +++ + D AVHS KD+P +L +G +S+++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLSSFMPREDPRDAFVSNKYSSIDDLPR 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRYDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELNE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C AI +A + + +V +SDGK + G+ D + +G+ AQ
Sbjct: 239 CHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLTGD--DPMRLGKLLAQ 287
>gi|326569020|gb|EGE19089.1| porphobilinogen deaminase [Moraxella catarrhalis BC1]
Length = 321
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IAGFA + L G V + DGK + ++ I + AA+ +
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQL 294
>gi|229163420|ref|ZP_04291371.1| Porphobilinogen deaminase [Bacillus cereus R309803]
gi|228619989|gb|EEK76864.1| Porphobilinogen deaminase [Bacillus cereus R309803]
Length = 309
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 167/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS +S KDLA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGESFKDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHMNDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D + +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVAGT--DPVEVGLEAADRL 292
>gi|194097777|ref|YP_002000818.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945]
gi|239998278|ref|ZP_04718202.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|240015900|ref|ZP_04722440.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA6140]
gi|240080040|ref|ZP_04724583.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
gi|240114994|ref|ZP_04729056.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|240122831|ref|ZP_04735787.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|240125027|ref|ZP_04737913.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|240127540|ref|ZP_04740201.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|268600662|ref|ZP_06134829.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|268681446|ref|ZP_06148308.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|268683614|ref|ZP_06150476.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|268685917|ref|ZP_06152779.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|193933067|gb|ACF28891.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945]
gi|268584793|gb|EEZ49469.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|268621730|gb|EEZ54130.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|268623898|gb|EEZ56298.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|268626201|gb|EEZ58601.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|317163558|gb|ADV07099.1| porphobilinogen deaminase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 311
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 294
>gi|254366979|ref|ZP_04983015.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica 257]
gi|134252805|gb|EBA51899.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica 257]
Length = 300
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 154/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I + S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASGESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266
>gi|332750972|gb|EGJ81377.1| porphobilinogen deaminase [Shigella flexneri 4343-70]
gi|332751059|gb|EGJ81463.1| porphobilinogen deaminase [Shigella flexneri K-671]
Length = 286
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 147/263 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296
R G DA +G A+ +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEEL 267
>gi|254375261|ref|ZP_04990741.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548]
gi|151572979|gb|EDN38633.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548]
Length = 300
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGK 266
>gi|309784521|ref|ZP_07679159.1| porphobilinogen deaminase [Shigella dysenteriae 1617]
gi|308927627|gb|EFP73096.1| porphobilinogen deaminase [Shigella dysenteriae 1617]
Length = 286
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 147/263 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLVALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296
R G DA +G A+ +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEEL 267
>gi|119469646|ref|ZP_01612515.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7]
gi|119446893|gb|EAW28164.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7]
Length = 312
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 161/293 (54%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR S LAL A ++ L H + ++P+ST+GD I + L +IGGKGL
Sbjct: 6 KLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L +L
Sbjct: 64 FVKELEQAMLDGRADIAVHSMKDVPVEFPEGLALHTICEREDPRDAFVSNHFANLNELPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ +
Sbjct: 124 GAVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDAGQYDAIILAAAGLIRLEMGE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + E P+ GQGA+ IE + + + L+ + H T VN ERA L+G
Sbjct: 184 RIADYIEPEVSLPANGQGAVGIECRIEDEVTKALLAPLEHTHTRIRVNAERAMNRRLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ I +A ++ G+V A DG G+ DA +G + A+ +
Sbjct: 244 CQVPIGAYALVDSEQVHLRGLVGAIDGSEILRDEVAGHINDAEKLGIELAEKL 296
>gi|332978074|gb|EGK14812.1| hydroxymethylbilane synthase [Desmospora sp. 8437]
Length = 367
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 158/290 (54%), Gaps = 5/290 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPP-HNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+GTR S LA+ + D ++P + + + T+GD+I N TL+++GGKGLF +
Sbjct: 64 VGTRRSQLAVTQTQWVMEQVRD--RLPQGWQMEMEKMVTRGDQILNVTLSKVGGKGLFVK 121
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L+ G ID AVHS KDMP ++ +GL A RED RD +S + L DL ++
Sbjct: 122 EIEQALLDGRIDFAVHSMKDMPGEMPEGLIFGAVTRREDPRDCLLSRKGEGLDDLPENAC 181
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A LL +R D+ V RG + TR KL + + AI+LA AGI R+ +
Sbjct: 182 VGTSSLRRQAQLLAYRPDLRVEPVRGNLNTRYQKLMDGQFDAIILAQAGIARMDWTDKVT 241
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+++ E P+ GQGA+ ++ ++ + EL+ +N T +V ER FL +G C
Sbjct: 242 QVVPEEVMLPAVGQGALAVQCRRDDQELLELLAEVNDPVTERAVTAERTFLQAFEGGCHL 301
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG A G + G+V G G D + +GR A+ +
Sbjct: 302 PIAGRATVDGERIRLRGLVAHPSGTPILREEAEG--ADPVELGRRLAREL 349
>gi|254372115|ref|ZP_04987608.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569846|gb|EDN35500.1| hydroxymethylbilane synthase [Francisella novicida GA99-3549]
Length = 300
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 154/267 (57%), Gaps = 3/267 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C AI +A + + +V +SDG
Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDG 265
>gi|149186168|ref|ZP_01864482.1| porphobilinogen deaminase [Erythrobacter sp. SD-21]
gi|148830199|gb|EDL48636.1| porphobilinogen deaminase [Erythrobacter sp. SD-21]
Length = 292
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 144/256 (56%), Gaps = 3/256 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD++ +R L +IGGK L+T E++ L G
Sbjct: 1 MAQAHETRARLCAAHSWDEARVELVPVIASGDKVQDRPLADIGGKALWTRELDIWLAEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T G+ I+A LPRED DV + T SL+ + + +GTS+ RR A
Sbjct: 61 IDAAVHSMKDVETIRPDGIAIAAILPREDKADVLLGAT--SLEAIPQGAKVGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D+ V+ RG + TR+ KL +A A LA AG+ RL EK + L ED+ P
Sbjct: 119 QLLYARPDLEVVGIRGNVATRMAKLQAGEADATFLAAAGLVRL-GEKSVGVRLEPEDWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+P Q AI IE ++ +AQE++ I+H + + V ERA L L G+C S IA +G
Sbjct: 178 APAQAAIGIECRASDERAQEVLAAIDHAHSREEVFAERALLEGLGGTCHSPIAALTRREG 237
Query: 257 STLYFYGIVLASDGKI 272
L + + DG I
Sbjct: 238 DALRMTAAIYSPDGAI 253
>gi|87118000|gb|ABD20307.1| HemC [Shigella dysenteriae]
gi|87118002|gb|ABD20308.1| HemC [Shigella dysenteriae]
gi|87118004|gb|ABD20309.1| HemC [Shigella dysenteriae]
Length = 272
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD
Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG + TRL+KL+N + AI+LA AG+KRL E I+ L + P+ GQGA+ IE
Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPDISLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A DG R G DA +G A+ +
Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268
>gi|313608617|gb|EFR84478.1| porphobilinogen deaminase [Listeria monocytogenes FSL F2-208]
Length = 309
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 160/281 (56%), Gaps = 5/281 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L
Sbjct: 60 LFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQMNALDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R L
Sbjct: 120 HGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLXXXXPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
L+G C+ IAGFA ++F G+V +DG I E + G
Sbjct: 240 LNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG 280
>gi|240112249|ref|ZP_04726739.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
gi|268598310|ref|ZP_06132477.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
gi|268582441|gb|EEZ47117.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
Length = 311
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 294
>gi|326560715|gb|EGE11083.1| porphobilinogen deaminase [Moraxella catarrhalis 46P47B1]
Length = 321
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IAGFA + L G V + DGK + ++ I + AA+ +
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294
>gi|293402361|ref|ZP_06646498.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304208|gb|EFE45460.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 299
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 145/250 (58%), Gaps = 4/250 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ IGTR S LALA + + R+ L + + P H+ + ++TKGD + L ++ KG+F
Sbjct: 3 YIIGTRGSALALAQSEQVRTLLQNTY--PQHSFTLQIIATKGDLQQHVALDQMDAKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G+I AVHS KDMPT+L KGL + L RED RDVFIS T + +L +
Sbjct: 61 KEIEEALLAGKIHMAVHSLKDMPTQLPKGLCFTKTLLREDARDVFISRTKTAFHELGPQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT S RRK L++ R DISV+ RG ++TRL K+ + I+LA AG+KRL+ + +
Sbjct: 121 KIGTGSKRRKVQLMKLRPDISVVGIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLQVQGIS 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E P+ GQGA+ IE + ++ + + + ER FL +DG C
Sbjct: 181 YEYFPYTSMIPACGQGALAIEVKEQDATLLTMINALANTHIDQEIQIERTFLQAIDGGCH 240
Query: 246 SAIAGFAYCK 255
+ + A+CK
Sbjct: 241 TPVG--AHCK 248
>gi|94311681|ref|YP_584891.1| porphobilinogen deaminase [Cupriavidus metallidurans CH34]
gi|93355533|gb|ABF09622.1| hydroxymethylbilane synthase [Cupriavidus metallidurans CH34]
Length = 334
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 155/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 24 IASRESRLAMWQAEHVRAALQQYY--PSCDVSILGMTTRGDQILDRTLSKVGGKGLFVKE 81
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G D AVHS KD+P +L +G ++A + RED RD +S SL+++ +V+
Sbjct: 82 LEVAMSEGRADLAVHSLKDVPMELPEGFTLTAVMEREDPRDALVSAQFASLEEMPAGTVV 141
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL I+
Sbjct: 142 GTSSLRREAALRSRFPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDRIRA 201
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+ GQGA+ IE + P+ E + +NH T +V+ ERA L GSC+
Sbjct: 202 LIAPESSLPAAGQGALGIEIRADRPELAEWLAPLNHLPTLLAVSAERAVSRRLGGSCQVP 261
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A + ++L V DG
Sbjct: 262 LAAHARWRDASLQLDAFVALPDG 284
>gi|56461658|ref|YP_156939.1| porphobilinogen deaminase [Idiomarina loihiensis L2TR]
gi|61213262|sp|Q5QUS3|HEM3_IDILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56180668|gb|AAV83390.1| Porphobilinogen deaminase [Idiomarina loihiensis L2TR]
Length = 313
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 164/292 (56%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A + L ++H P ++ ++P+STKGD I + L +IGGKGLF
Sbjct: 5 VRIATRKSKLALWQAEHIQQRLEELH--PGLSVELVPMSTKGDVILDTPLAKIGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G D AVHS KD+P + GL++ RED RD F+S+ ++L +L +
Sbjct: 63 KELEVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNELPEGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+ I
Sbjct: 123 VVGTCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLELGDRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +E P+ GQGA+ IE ++ + + L+ + ++T V ERA LDG C+
Sbjct: 183 TSFIPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGLDGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A +G +Y G+V D GK+ + R G A +G + A+ +
Sbjct: 243 VPIGAYAELEGDEVYLRGLVGEPDGGKVLRDEVR-GPASKAEELGSELAERL 293
>gi|229019689|ref|ZP_04176496.1| Porphobilinogen deaminase [Bacillus cereus AH1273]
gi|229025928|ref|ZP_04182320.1| Porphobilinogen deaminase [Bacillus cereus AH1272]
gi|228735374|gb|EEL85977.1| Porphobilinogen deaminase [Bacillus cereus AH1272]
gi|228741596|gb|EEL91789.1| Porphobilinogen deaminase [Bacillus cereus AH1273]
Length = 309
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 167/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A K + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLKEDDAIELTALVGSMDGSVLLKETVVGT--DPKQVGLEAADRL 292
>gi|73666979|ref|YP_302995.1| porphobilinogen deaminase [Ehrlichia canis str. Jake]
gi|123773372|sp|Q3YSA8|HEM3_EHRCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72394120|gb|AAZ68397.1| Porphobilinogen deaminase [Ehrlichia canis str. Jake]
Length = 298
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 3/257 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA E ++L++ + P NI ++ + T GD + IGGKGLF
Sbjct: 3 IRIGTRGSVLALAQTLEV-TNLLNRY-FPEINIQVVKIKTSGDINNKVPINTIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G++D AVHS KD+P GL I L R DVF+S QS+K L +++
Sbjct: 61 KEIEEALLIGKVDLAVHSVKDIPAFYCDGLIIPCVLKRSSPYDVFVSSKYQSIKSLPINA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RRK L R D+ VI RG I+TR+ K + + I+LA AG+ R+ K VI
Sbjct: 121 TVGTSSIRRKVQLNYLRPDLQVIPVRGNIDTRILKSDIGEFDGIVLAEAGLIRINKCNVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KE+L+ + + GQGAIC++ ++ +KV+N ++ V ER+FL ++GSC
Sbjct: 181 KEVLDSKIMLSAVGQGAICVQCRADDYNIINKIKVLNCHKSYVCVIAERSFLKTINGSCD 240
Query: 246 SAIAGFA-YCKGSTLYF 261
+ +A A Y T+Y
Sbjct: 241 TPLAALAQYVDSDTIYM 257
>gi|225075410|ref|ZP_03718609.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens
NRL30031/H210]
gi|224953228|gb|EEG34437.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens
NRL30031/H210]
Length = 325
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
GSC+ +A + + L G+V DG + + A +GR A+
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306
>gi|254515499|ref|ZP_05127559.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3]
gi|219675221|gb|EED31587.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3]
Length = 308
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 163/282 (57%), Gaps = 2/282 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLAL A+ R +L+ +H P ++ ++ ++++GD+I + L ++GGKGLF +E
Sbjct: 7 IATRESPLALWQAYFVRDTLLKMH--PGISVELLGMTSRGDQILDVPLAKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G AVHS KD+P + GL+++ RE+ D F+S+ ++L L +V+
Sbjct: 65 LETALLDGRAHIAVHSMKDVPMEFPDGLELAVICEREEPADAFVSNNYENLDALPPGAVV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ L R D++V RG + TRL KL+ + AI+LA AG+ RL+ + I+
Sbjct: 125 GTSSLRRECQLRANRPDLTVRFLRGNVNTRLRKLDEGEYDAIILACAGLIRLEMGERIRA 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + + P+ GQGA+ IE ++ +EL+ ++H T + V ERA L G C+
Sbjct: 185 RIPVTESLPAGGQGAVGIEIRSDDSATRELLAPLHHGPTAERVLAERALNRRLQGGCEVP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
IA +A +G L+ G+V DG G+R + +G
Sbjct: 245 IAAYAVHEGDQLWLRGLVGRPDGSNTLRADARGSRDNPEALG 286
>gi|229169206|ref|ZP_04296920.1| Porphobilinogen deaminase [Bacillus cereus AH621]
gi|228614272|gb|EEK71383.1| Porphobilinogen deaminase [Bacillus cereus AH621]
Length = 309
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLMIGCTPKRVDPRDAFISKNGESFKDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A K + +V + DG + + GN D +G +AA +
Sbjct: 242 QVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRL 292
>gi|218290821|ref|ZP_03494890.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1]
gi|218239179|gb|EED06380.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1]
Length = 305
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 159/285 (55%), Gaps = 6/285 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI--VIIPLSTKGDRITNRTLTEIGGKGL 63
R+ TR S LAL + ++D+ K H++ ++P+ T+GD I +R L+E+GGKGL
Sbjct: 4 LRVATRRSALALTQT----NHVVDLLKRVIHDLKFELVPIRTRGDEIVDRALSEVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +IE L +G D AVHS KD+P +L GL I A RED RD IS T Q L DL
Sbjct: 60 FVADIEDALATGRADLAVHSLKDVPFELRDGLTIGAVPRREDPRDALISRTGQGLFDLPP 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A L R R D+ V RG ++TR+ +L + AI+LA +G+ RL +
Sbjct: 120 GARVGTSSLRRQAALRRLRPDLRVDTLRGNVDTRIRRLEEGQFDAIVLAASGLHRLGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+GS
Sbjct: 180 KITEYLPVDRFVPAVGQGALAIECRAEDDEVLRYLGAIADPDATRAVEAERAFLSRLEGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
C+ I +A G L V G + ++ R G+ A+ +
Sbjct: 240 CQVPIGAYAEPVGHELRLIAFVADPSGARYLQLERTGSDARALGV 284
>gi|296112247|ref|YP_003626185.1| porphobilinogen deaminase [Moraxella catarrhalis RH4]
gi|295919941|gb|ADG60292.1| porphobilinogen deaminase [Moraxella catarrhalis RH4]
Length = 321
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IAGFA + L G V + DGK + ++ I + AA+ +
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQL 294
>gi|161617053|ref|YP_001591018.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161366417|gb|ABX70185.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 286
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 143/263 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
Q L+ +NH T V ERA L+G C+ I +A ++ +V A DG +
Sbjct: 185 TQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVM 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296
R G+ A +G A+ +
Sbjct: 245 VRGERRGSPEQAEQMGISLAEEL 267
>gi|87118018|gb|ABD20316.1| HemC [Shigella dysenteriae]
gi|87118046|gb|ABD20330.1| HemC [Escherichia coli]
Length = 272
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD
Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE
Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A DG R G +A +G A+ +
Sbjct: 239 APDGSQIIRGERRGAPQNAEQMGISLAEEL 268
>gi|221124344|ref|XP_002162635.1| PREDICTED: similar to hydroxymethylbilane synthase a [Hydra
magnipapillata]
Length = 450
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 148/256 (57%), Gaps = 4/256 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LAL A ++ L + ++ ++ ++TKGD+I +R+L+++GGKGLF
Sbjct: 151 FTIATRESRLALWQAEHVKALL----EQSGASVSLLGMTTKGDQILDRSLSKVGGKGLFV 206
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL +
Sbjct: 207 KELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKGA 266
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E I
Sbjct: 267 VVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESRI 326
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC
Sbjct: 327 RAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSCS 386
Query: 246 SAIAGFAYCKGSTLYF 261
+A +A G L+
Sbjct: 387 MPLAAYATISGDELHI 402
>gi|260220724|emb|CBA28572.1| Porphobilinogen deaminase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 312
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 148/256 (57%), Gaps = 4/256 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LAL A ++ L + ++ ++ ++TKGD+I +R+L+++GGKGLF
Sbjct: 13 FTIATRESRLALWQAEHVKALL----EQSGASVSLLGMTTKGDQILDRSLSKVGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL +
Sbjct: 69 KELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E I
Sbjct: 129 VVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC
Sbjct: 189 RAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSCS 248
Query: 246 SAIAGFAYCKGSTLYF 261
+A +A G L+
Sbjct: 249 MPLAAYATISGDELHI 264
>gi|88705502|ref|ZP_01103212.1| Porphobilinogen deaminase [Congregibacter litoralis KT71]
gi|88700015|gb|EAQ97124.1| Porphobilinogen deaminase [Congregibacter litoralis KT71]
Length = 308
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 163/282 (57%), Gaps = 2/282 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLAL A+ R +L++ H P + ++ ++++GD+I + L ++GGKGLF +E
Sbjct: 7 IATRESPLALWQAYFVRDTLLETH--PGITVELLGMTSRGDQILDVPLAKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G AVHS KD+P + +GL+++ RE+ D F+S+ ++L L +++
Sbjct: 65 LETALLDGRAHIAVHSMKDVPMEFPEGLELAVICEREEPADAFVSNRYENLDALPAGAIV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ L R D+ V RG + TRL KL+ + A++LA AG+ RL+ + I+
Sbjct: 125 GTSSLRRECQLRANRPDLEVRFLRGNVNTRLRKLDEGEYDAVILACAGLIRLEMGERIRA 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + D P+ GQGA+ IE ++ ++L++ ++H T + V ERA L G C+
Sbjct: 185 RIPVTDSLPAGGQGAVGIEIRSDDSATRKLLEPLHHGPTAERVLAERALNRRLQGGCEVP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
IA +A +G L+ G+V DG G+R + +G
Sbjct: 245 IASYAVHEGDELWLRGLVGRPDGSHTLRADARGSREEPEALG 286
>gi|171319139|ref|ZP_02908260.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5]
gi|171095659|gb|EDT40618.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5]
Length = 328
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 169/304 (55%), Gaps = 5/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 14 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 71
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +
Sbjct: 72 KELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGA 131
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I
Sbjct: 132 VVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARI 191
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 192 RTLIDVEDSPPAAGQGALGIEIAAHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 251
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302
+A A + LY G V +DG+ G DA+ +GR + + +
Sbjct: 252 VPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGAR 311
Query: 303 NVFN 306
++ N
Sbjct: 312 DIVN 315
>gi|251798413|ref|YP_003013144.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2]
gi|247546039|gb|ACT03058.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2]
Length = 323
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 160/300 (53%), Gaps = 14/300 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LAL + L + H H I + TKGDRI + TL+++GGKGLF
Sbjct: 13 VGTRQSALALTQTGQVIDELKRISEKHGFDYH-FEIRKIVTKGDRILDVTLSKVGGKGLF 71
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L+ GEID AVHS KDMP +L +GL A R D RD I SL DL
Sbjct: 72 VKEIEQALLDGEIDMAVHSMKDMPYELPEGLMNGATPRRVDPRDCLIMKQGSSLDDLPAG 131
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR + L R D+ + RG I++R+ KL A++LA AG+ R+ +
Sbjct: 132 ARVGTSSLRRSSQLKNIRPDLKLDSIRGNIDSRIRKLETEGFDAVVLAAAGLSRMGWQDR 191
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ P+ GQGA+ IE + +EL+ ++N +T SV ER+FL L+G C
Sbjct: 192 ISAFIPVDLSIPAVGQGALGIECRTADAGVRELLNLLNDTETSLSVRAERSFLGALNGGC 251
Query: 245 KSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ I FA + L G+V + DG++ + R G D +GRD A +
Sbjct: 252 QVPIGAFAVVHKKSEDSFDNAELELTGMVGSPDGEVMLKEIRKG--TDPEQLGRDVAAAL 309
>gi|294085042|ref|YP_003551802.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664617|gb|ADE39718.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 347
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 161/298 (54%), Gaps = 23/298 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P + +R S LA+A A R +L P I P +TKGD I +R L E+GGKG+F
Sbjct: 42 PLVLASRASTLAMAQAELVRVAL------KPVASRIEPFTTKGDLILDRPLVEVGGKGVF 95
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L++GE D AVHS KDM + G I A LPRED RD + A L L
Sbjct: 96 IKELERSLLAGESDAAVHSMKDMESDFAAGTMIGAVLPREDRRDALVGSYAD-LDALPDG 154
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GTSS+RR+ALLL R D+ + RG I R+ KLN AI+LA AG+KRLK +
Sbjct: 155 AIVGTSSVRRRALLLHHRPDLRIKLLRGNINKRIAKLNQGDYDAIILAVAGLKRLKLS-L 213
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS------------VNC 232
L+ + P + QGA+ ++ + +P + K I + +D+ V
Sbjct: 214 DYTPLDEKLMPTAAAQGALAVQ--LCDPSLAQGEKAIRQQAVFDAISPLACVNSTIEVTA 271
Query: 233 ERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ERA LA LDGSC + IA A + TL G+VL+SDG + ++ +A+ +G
Sbjct: 272 ERAMLAHLDGSCHTPIAASARFVDDKTLRLDGMVLSSDGSAAFRRTMTASKDEAVALG 329
>gi|82751259|ref|YP_417000.1| porphobilinogen deaminase [Staphylococcus aureus RF122]
gi|123727415|sp|Q2YTB9|HEM3_STAAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|82656790|emb|CAI81219.1| Porphobilinogen deaminase [Staphylococcus aureus RF122]
Length = 308
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 166/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+I+ P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDIDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLK 293
>gi|255037032|ref|YP_003087653.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053]
gi|254949788|gb|ACT94488.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053]
Length = 307
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 157/268 (58%), Gaps = 8/268 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL A+ L IVII TKGD+I +R+L++IG KG+FT
Sbjct: 3 IKIGTRGSKLALWQAYYVEELLQ--RGGVETEIVII--ETKGDKILDRSLSKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLALH 124
EE+E +L SG+ID AVHSAKD+ + L +I A+ RE DV +SH T SLK
Sbjct: 59 EELEDQLRSGDIDIAVHSAKDLQSHLDDAFEIIAFTEREQANDVLVSHDTTLSLKSGESF 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V GTSS RR A+L + I +D RG ++TRL KL + A+LLA+AG+ R++ +
Sbjct: 119 TV-GTSSTRRVAVLKHYYPHIKTVDMRGNLQTRLRKLEEGQCDALLLAFAGVHRMEYDDK 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L +++F P+ GQG++ IET V + K +L +++N+E T + ERAFL L G
Sbjct: 178 IAEHLLLDEFTPAVGQGSVAIETAVALDPAKKSKLRELLNNEHTETCLLAERAFLKRLQG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C + G A + G +++ DG
Sbjct: 238 GCSIPVFGMATLHEDEIRMTGGIISLDG 265
>gi|229013679|ref|ZP_04170808.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048]
gi|229135309|ref|ZP_04264103.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196]
gi|228648132|gb|EEL04173.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196]
gi|228747601|gb|EEL97475.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048]
Length = 309
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A K + +V + DG + + GN D +G +AA +
Sbjct: 242 QVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRL 292
>gi|326571836|gb|EGE21842.1| porphobilinogen deaminase [Moraxella catarrhalis BC7]
Length = 321
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + A++LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAVILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ IAGFA + L G V + DGK + ++ I + AA+ +
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294
>gi|317486609|ref|ZP_07945428.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6]
gi|316922143|gb|EFV43410.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6]
Length = 308
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 159/291 (54%), Gaps = 7/291 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A + SL VH P + + + TKGD I + L ++GG
Sbjct: 1 MEK--LVIATRGSRLALWQANHVKDSLEAVH--PGLAVELNIIKTKGDIILDVPLAKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+SG D AVHS KD+P +L +GL + RED D+F+S SL++
Sbjct: 57 KGLFVKEIEEALLSGAADIAVHSMKDVPMELPEGLILGIVPEREDPTDLFLSVDYDSLEN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A +L R D+ V+ RG ++TRL KL + AI++A AG+KRL
Sbjct: 117 LPAGAVVGTSSLRRQAQVLAQRPDLEVVSLRGNVDTRLRKLTEGQFAAIIMATAGMKRLG 176
Query: 181 KEKVIKEI-LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
V KE L F P+ GQGA+ IE + E++ + H T V ER LA
Sbjct: 177 L-SVPKECPLAPPAFIPAVGQGALGIEFREDRKDLAEMLSFMEHRPTRICVEAERGLLAG 235
Query: 240 LDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LDG C+ IAG A T G+V DG + G +A +G
Sbjct: 236 LDGGCQVPIAGHAEMLDDGTFELEGLVGEVDGSVIIRRKVTGRADEARAVG 286
>gi|220904556|ref|YP_002479868.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868855|gb|ACL49190.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 159/305 (52%), Gaps = 3/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ I TR S LAL A +S L + P I + + TKGD I + L ++GGKG
Sbjct: 2 RNTLTIATRGSRLALWQAEHVKSCLQAIR--PGLEIRLNVIKTKGDIILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L++GE D AVHS KD+P +L +GL + PRED D +SH S+ L
Sbjct: 60 LFVKEIEEALLNGEADLAVHSMKDVPMELPEGLILGCVPPREDPTDCLLSHKYDSVAALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ +GTSSLRR++ LL R D+ + RG ++TRL KL AI+LA AG+KRL
Sbjct: 120 PNACVGTSSLRRQSQLLAQRPDLRIESLRGNVDTRLRKLQEGMYDAIILASAGLKRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L+ F P+ GQGA+ IE N+ + L+ + T V ER FLA L+G
Sbjct: 180 APHMHALDPHTFLPAVGQGALGIECRENDYELFTLLAEMEDSATRVCVEAERGFLAGLEG 239
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG A TL G+V DG S++G+ A G + A I
Sbjct: 240 GCQVPIAGHARLLDDDTLRLEGLVAEVDGSRILRCSKDGHTSQARRWGLELAGEILEQGG 299
Query: 302 KNVFN 306
K +
Sbjct: 300 KGILE 304
>gi|187478790|ref|YP_786814.1| porphobilinogen deaminase [Bordetella avium 197N]
gi|115423376|emb|CAJ49910.1| porphobilinogen deaminase [Bordetella avium 197N]
Length = 314
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 156/282 (55%), Gaps = 2/282 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L D++ P + ++ L+T+GD+I +R+L+++GGKGLF +E
Sbjct: 9 IATRASRLALWQAEHVRDRLRDLY--PACAVELLTLTTRGDQILDRSLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P + +S L R D RD F+S SL L + +V+
Sbjct: 67 LEHALLDGRADLAVHSLKDVPVDIQAPFALSTVLERADPRDAFVSARYASLDALPVGAVV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A + R D+ V RG ++TRL KL+ + A++LA AG++R+ I+
Sbjct: 127 GTSSLRREAQIRAARPDLVVRPLRGNLDTRLGKLDRGEYDAVVLAAAGLERIGYGDRIRA 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L P+ GQGA+ IE + + + ++ T V+ ERA L GSC+
Sbjct: 187 RLAPAQSLPAAGQGALGIEIRDDRDDMRAWLAPLSDASTTACVSAERAVSRALGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
I +A G TL +V + DG+ SR G +A ++G
Sbjct: 247 IGAYAELHGQTLRIDALVASPDGRRILRASRLGPVAEADSLG 288
>gi|258545718|ref|ZP_05705952.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826]
gi|258519035|gb|EEV87894.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826]
Length = 310
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 161/285 (56%), Gaps = 5/285 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LAL A E ++ + H PH V ++P++T+GD+I + L IGGKGLF
Sbjct: 8 IRIATRESKLALWQA-EHVAARLRAHY--PHLAVRLVPMTTRGDQILDAPLARIGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ + GE D AVHS KD+ L +G +I+A LPRE+ D F+S+ SL +L
Sbjct: 65 IKELEQAMARGEADIAVHSMKDVGVHLPEGFRIAAILPRENPHDAFVSNHYASLAELPPG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT SLRR+ L R R D+ ++D RG ++TRL+KL+ AI+LA AG+ RL +
Sbjct: 125 ARVGTCSLRRRMQLARLRPDLKLLDLRGNVQTRLDKLDRGDFDAIVLACAGLIRLGLQAR 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L E P+ GQGAI IE H + L+ ++ DT V+ ER L+GSC
Sbjct: 185 IRAELPPEQSLPAIGQGAIGIECHETS-AVYPLLAALDDADTALCVHTERIINTHLEGSC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ +A A G ++ + DG + + + R DA +G
Sbjct: 244 QVPLAAHAALHGERIHLAARIGMPDGSRYLSAADDAPRRDAEALG 288
>gi|163856376|ref|YP_001630674.1| porphobilinogen deaminase [Bordetella petrii DSM 12804]
gi|229836105|sp|A9IKF3|HEM3_BORPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|163260104|emb|CAP42405.1| hemC [Bordetella petrii]
Length = 313
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF +E
Sbjct: 9 IATRASRLALWQAEHVRDRLRALY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ +L DL +V+
Sbjct: 67 LETALLDGRADLAVHSLKDVPVDLQAPFELCAILERADPRDAFVSNQYTTLADLPAGAVV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ + + +SV RG ++TRL+KL+ AI+LA AG++RL + I+
Sbjct: 127 GTSSLRRESQIRQRYPHLSVKPLRGNLDTRLSKLDRGDYAAIVLAAAGLQRLGMGERIRS 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L ED P+ GQGA+ IE + +E + + T V ERA L GSC+
Sbjct: 187 LLEPEDSLPAAGQGALGIEIRNDRNDLREWLAPLACSRTTACVVAERAVSRALGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A +A G++L +V + DG
Sbjct: 247 LAAYAELNGNSLALRALVASPDG 269
>gi|323173419|gb|EFZ59048.1| porphobilinogen deaminase [Escherichia coli LT-68]
Length = 286
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 146/259 (56%)
Query: 38 IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97
+ ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 9 VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGL 68
Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TR
Sbjct: 69 VTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 128
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL
Sbjct: 129 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTREL 188
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 189 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 248
Query: 278 RNGNRCDAINIGRDAAQYI 296
R G +A +G A+ +
Sbjct: 249 RRGAPQNAEQMGISLAEEL 267
>gi|323489960|ref|ZP_08095181.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2]
gi|323396256|gb|EGA89081.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2]
Length = 309
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 172/291 (59%), Gaps = 7/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + L P I + TKGDRI + L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNQFIDKLKAAGA--PFEFEIKEIVTKGDRIVDVMLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L EID AVHS KDMP+ L +GL I RED RD +I++ L DL + +V+
Sbjct: 64 IEQALFDREIDFAVHSMKDMPSVLPEGLAIGCIPEREDPRDAYIANDHVKLLDLPVGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR + LL R D+ + RG I+TRL KL + AI+LA AG+KR+ K+ ++
Sbjct: 124 GTSSLRRSSQLLLLRPDLDIQWIRGNIDTRLAKLKSGDFDAIILAAAGLKRMGWKDDLVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L +++ P+ GQG++ IE + + + +NHEDT +VN ER FL ++DGSC+
Sbjct: 184 EFLEVDECLPAIGQGSLGIECREEDTELLSELAKLNHEDTALAVNAERKFLKDMDGSCQV 243
Query: 247 AIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+A K + F G++ + + ++F E++ + D I GR A+ I
Sbjct: 244 PIAGYATVKDGEVTFTGLISSPEADQVFKEMAIS---HDPIEAGRIVAEKI 291
>gi|295695321|ref|YP_003588559.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912]
gi|295410923|gb|ADG05415.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912]
Length = 310
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LA+ TR + K +P + ++P++T+GDR+ + L+ +GGKGLF
Sbjct: 4 LRIGSRKSALAMTQ---TRWLIEQWQKRVPGLSAEVVPMTTRGDRVLDVPLSRVGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
EEIE+ L+ ID AVHS KD+P +L G + A RED RD I+ + DL
Sbjct: 61 VEEIERALLEKRIDAAVHSLKDLPAQLAPGTVVGAVPRREDPRDAVITRDGRPFDDLPSG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR A L R+R D++ I RG ++TRL KL + A++LA AGI RL
Sbjct: 121 ARVGTSSLRRVAQLRRYRPDLAFIPLRGNVDTRLRKLAAGEVDAVVLAAAGILRLGLGDR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ E P+ GQGA+ ++ + + ++ + +V ER LA L+G C
Sbjct: 181 ITEYLSPEICLPAVGQGALAVQCREADEDTRRSLESVEDAAARKTVEAERTCLAALEGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ I A + + +V DG V G D +GR AA
Sbjct: 241 QVPIGALAEIRDGHIRLAAMVARPDGSELLRVVVQGE--DPAEVGRRAA 287
>gi|254519530|ref|ZP_05131586.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA]
gi|226913279|gb|EEH98480.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA]
Length = 290
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 167/289 (57%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA A + + + + I ++++ T+GDR + TL +IGGKGLF +E
Sbjct: 5 IATRKSKLAQVQADKVIELIKEKNNINAKKLLVV---TEGDRRLDVTLDKIGGKGLFVKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P +L + ++ A R+DIRDVF+S +DL ++I
Sbjct: 62 IEYALLNKEAHAAVHSMKDVPFELSEDFELVAIPERDDIRDVFVSSNGIHFQDLKEGAII 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR A+L + R D++++ RG ++TRL+K+ I+LA AGIKRL E +I +
Sbjct: 122 GTSSIRRAAMLKKLRGDLNIVPIRGNVQTRLDKMKKENMDGIILAAAGIKRLGLEDIITD 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++F P+ GQGA+ IE + N + +K +++++ +V ER+F+ +L+G C S
Sbjct: 182 YFDPKEFLPAIGQGALGIEA-LKNGEYNNYLKKLDNKEVRIAVEAERSFMKKLNGGCHSV 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ K LY G GKI + G + + I +G AQ I
Sbjct: 241 IGVYSEIKNDDLYMIG-TFDVGGKIIKK-DILGKKSENIELGFKLAQKI 287
>gi|229062158|ref|ZP_04199482.1| Porphobilinogen deaminase [Bacillus cereus AH603]
gi|228717141|gb|EEL68817.1| Porphobilinogen deaminase [Bacillus cereus AH603]
Length = 309
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDITLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A K + +V + DG + + GN D +G +AA +
Sbjct: 242 QVPIAGYATLKENDEIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRL 292
>gi|229543656|ref|ZP_04432716.1| porphobilinogen deaminase [Bacillus coagulans 36D1]
gi|229328076|gb|EEN93751.1| porphobilinogen deaminase [Bacillus coagulans 36D1]
Length = 310
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 156/270 (57%), Gaps = 5/270 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LAL +T+ + + ++ P I ++TKGD++ + TL+++GGKGLF +
Sbjct: 6 VGSRRSKLALT---QTKWVVAKLEQLGLPFRFEIREITTKGDKVLDVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE +++ EID AVHS KD+P L GL I RED+RD IS L +V
Sbjct: 63 EIEDAMLNHEIDMAVHSMKDVPAVLPDGLVIGCIPEREDVRDALISKNGTPFSSLKEGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185
+GTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+KR+ +
Sbjct: 123 VGTSSLRRGAQLLAVRSDIRIKSVRGNIDTRLEKLKNGDYDAIVLAAAGLKRMGWSADTV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E + + P+ GQGA+ +E ++ + + ++ ++ +T ++V ER FL +++G C+
Sbjct: 183 TEFFDPDICLPAIGQGALAVECRADDGELLDALRKLDSAETAETVKAERVFLDKMEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
IAG A + +V + DGK ++
Sbjct: 243 VPIAGLAKKTAEGISLTALVASPDGKTVYK 272
>gi|319639194|ref|ZP_07993945.1| porphobilinogen deaminase [Neisseria mucosa C102]
gi|317399378|gb|EFV80048.1| porphobilinogen deaminase [Neisseria mucosa C102]
Length = 325
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
GSC+ +A + + L G+V DG + + A +GR A+
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306
>gi|251773212|gb|EES53764.1| porphobilinogen deaminase [Leptospirillum ferrodiazotrophum]
Length = 321
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 4/296 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RIGTR S LAL A + + + +I T GD I + L+++GGK
Sbjct: 6 DSSPIRIGTRGSELALWQARHVAAMIRHTAGLESELTII---KTTGDMILSVPLSQVGGK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ LI+G ID AVHS KD+P L +GL+I A L RED RD F+S+ S L
Sbjct: 63 GLFVKEIEEALIAGTIDLAVHSMKDVPAFLPEGLEIGAILSREDPRDAFVSNAYSSFSSL 122
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR A L + R D+ RG + TRL KL+ N+ AI+LA AG+ RL
Sbjct: 123 PPGARIGTSSLRRMAQLKKRRPDLRFESLRGNVGTRLRKLDENQIDAIILAAAGLIRLGF 182
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I+E L +E P+ GQGA+ +E + + + ++ ++ +T V ER L+ LD
Sbjct: 183 SDRIREYLPVELSLPAVGQGALGLECRTGDHRIRTILARMHDPETTACVLAERGVLSALD 242
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ IA A + +L +G E +G +A +G +AAQ +
Sbjct: 243 GGCQLPIAAHARTISPEQIELIARILDVEGTTLLEEHTSGPAKEAHRLGVEAAQKL 298
>gi|241667490|ref|ZP_04755068.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876036|ref|ZP_05248746.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842057|gb|EET20471.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 300
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 156/268 (58%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL + + I I + T+GD I ++ L +IGGK L
Sbjct: 2 KQIVIASRESKLALWQTNYVKDRIQQELNIRCQ---INTMKTQGDIILDKPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E +++ + D AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLPR 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRGDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELNE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELHDNQITLTAMVASSDGK 266
>gi|323177814|gb|EFZ63398.1| porphobilinogen deaminase [Escherichia coli 1180]
Length = 279
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 146/259 (56%)
Query: 38 IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97
+ ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 2 VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGL 61
Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TR
Sbjct: 62 VTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 121
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL
Sbjct: 122 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTREL 181
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 182 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 241
Query: 278 RNGNRCDAINIGRDAAQYI 296
R G +A +G A+ +
Sbjct: 242 RRGAPQNAEQMGISLAEEL 260
>gi|24211755|sp|Q8YVU6|HEM3_ANASP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 323
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 169/309 (54%), Gaps = 9/309 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG
Sbjct: 9 RRTIRIGSRKSQLALVQTYWVREQLQN--SFPDINFEVHTMSTQGDKILDVALAKIGDKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120
LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H ++ KD
Sbjct: 67 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVH--ENFKDKQ 124
Query: 121 ---LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++
Sbjct: 125 IDTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQ 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL
Sbjct: 185 RLGMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFL 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R
Sbjct: 245 RSLEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLR 304
Query: 298 FISNKNVFN 306
+ + N
Sbjct: 305 EQGAQEILN 313
>gi|269213761|ref|ZP_05982800.2| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685]
gi|269145303|gb|EEZ71721.1| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685]
Length = 325
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
GSC+ +A + + L G+V DG + + A +GR A+
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306
>gi|284799715|ref|ZP_05984671.2| hydroxymethylbilane synthase [Neisseria subflava NJ9703]
gi|284797316|gb|EFC52663.1| hydroxymethylbilane synthase [Neisseria subflava NJ9703]
Length = 323
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFTLAAISERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRVRYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
GSC+ +A + + L G+V DG + + A +GR A+
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306
>gi|304407492|ref|ZP_07389144.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9]
gi|304343443|gb|EFM09285.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9]
Length = 325
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 162/300 (54%), Gaps = 13/300 (4%)
Query: 6 FRIGTRCSPLAL---AHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
R+GTR S LAL E L + H +P + + + TKGDRI + TL+++GGKG
Sbjct: 12 IRVGTRQSALALTQTGQVIEQLKELSERHGLP-YTFETVKIVTKGDRILDVTLSKVGGKG 70
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ GEID AVHS KDMP +L +GL + R D RDV I+ L
Sbjct: 71 LFVKEIEQALLDGEIDLAVHSMKDMPYELPEGLMNGSVPKRVDPRDVLITADGGGFDALP 130
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR + L R DI ++ RG I++RL KL + AI+LA AG+ R+ E
Sbjct: 131 NGAKVGTSSLRRASQLKNRRPDIEIVSIRGNIDSRLKKLETEQFDAIVLAAAGMTRMGWE 190
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I L ++ P+ GQGA+ IE + + L+ ++N + +V ER+FL L+G
Sbjct: 191 NRISSPLPVDICVPAVGQGALGIECREADSDVRYLLSLLNDPISELAVRAERSFLGALNG 250
Query: 243 SCKSAIA---------GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C+ I G + +G+ + GIV + DG+I + G +A+ + AA
Sbjct: 251 GCQIPIGAHATVAIPEGASNLEGALIELVGIVGSPDGEILLKEIGKGTDPEALGLSVAAA 310
>gi|302388903|ref|YP_003824724.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM
16646]
gi|302199531|gb|ADL07101.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM
16646]
Length = 299
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 161/285 (56%), Gaps = 14/285 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL L D + P ++ + T+GD++ + L++ GGKG+F
Sbjct: 8 VRVGSRESRLALVQTEIVIRLLKD--RRPELEFEVVKIKTQGDKLLDVNLSDAGGKGVFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G ID AVHS KD+P +L +GL I+A RED RDV IS + L +L +
Sbjct: 66 KEIEEALLAGSIDLAVHSMKDVPYELPEGLCIAAVTEREDPRDVLISRDKRRLLNLRPGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR L R D+ ++ RG + TR+ K+++ + ++LA AGIKRL E++I
Sbjct: 126 RIGTSSLRRSVQLKALRPDLDIVPVRGNVPTRIRKMDDLELDGLVLAAAGIKRLGLEELI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E E P+ GQGA+ +E ++ EL +++H+ T +V ER+F+ L GSC+
Sbjct: 186 AEYFPPEVIVPAVGQGALAVEARKDD-DILELAGLVSHKATEVAVRAERSFMRALGGSCR 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+ FA +G+ + G+ V +NG+ C G+
Sbjct: 245 VPLGAFARVEGTVVTLVGM-----------VEKNGSVCKGTMSGK 278
>gi|328474912|gb|EGF45712.1| porphobilinogen deaminase [Listeria monocytogenes 220]
Length = 288
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 145/245 (59%), Gaps = 7/245 (2%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + I + TKGDRI + TL+++GGKGLF E+E+ L ID AVHS KD+P+ L +
Sbjct: 10 PEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHSMKDVPSSLKE 69
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL I A RE D F+ + SL +L SVIGTSSLRR A LL+ R D + RG
Sbjct: 70 GLIIGAIPKRESPLDCFVFNRVNSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGN 129
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP-----PSPGQGAICIETH 208
I+TRL KL+ AI+LA AG+ R+ + L +ED P P+ GQGA+ IE
Sbjct: 130 IDTRLQKLHAENFDAIILAKAGLARMG--WLENTTLKLEDIPPELCLPAVGQGALAIECR 187
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
++ + ++++ I+HE+T V ER FL +L+G C+ IAGFA ++F G+V +
Sbjct: 188 ESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEVVHFKGLVGNA 247
Query: 269 DGKIF 273
DG I
Sbjct: 248 DGSII 252
>gi|85060344|ref|YP_456046.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans']
gi|84780864|dbj|BAE75641.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans']
Length = 320
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 148/271 (54%), Gaps = 4/271 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59
M+ RI TR SPLAL A R L+ H PH + ++PL T+GD + L ++G
Sbjct: 8 MQDNLLRITTRQSPLALWQAGYVRDELLRHH---PHLQVELVPLVTRGDITLDTPLAKVG 64
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ D AVHS KD+ GL + R+D RD F+S +L
Sbjct: 65 GKGLFIKELELALLEHRADIAVHSMKDVTVSFPAGLGLCVLCERDDPRDAFVSPRYANLD 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +++GTSSLRR+ L R D+ V D RG + TRL KL+ A++LA AG+KRL
Sbjct: 125 VLPPGAIVGTSSLRRQCQLRERRPDVIVHDLRGNVGTRLAKLDRGNFDAVILAVAGLKRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I+ ++ D P+ GQGA+ IE +++ + L+ ++H +T V ERA A
Sbjct: 185 GLEDRIRHAIDPADSLPAVGQGAVGIECRLDDARTLALLAPLHHRETSLRVGAERAMNAR 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L G C+ I +A G ++ +V + DG
Sbjct: 245 LQGGCQVPIGSYAVLDGEEIWLRALVGSPDG 275
>gi|284039864|ref|YP_003389794.1| porphobilinogen deaminase [Spirosoma linguale DSM 74]
gi|283819157|gb|ADB40995.1| porphobilinogen deaminase [Spirosoma linguale DSM 74]
Length = 309
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 173/301 (57%), Gaps = 20/301 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A E +L++ + ++I TKGD + +R+L +IG KG+FT
Sbjct: 3 IRIGTRSSRLAVWQA-EHIQALLEKGGLTSELVLI---ETKGDLVLDRSLAKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E +L SG ID AVHSAKD+P+ L L I A+ RE DV +S K L+L
Sbjct: 59 QELEDQLRSGTIDIAVHSAKDLPSNLPADLHIIAFTEREPANDVLVSRN----KSLSLQG 114
Query: 126 ----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
IGTSS RR A+L + ++ +D RG ++TR+ KL+ A+LLAYAG+ R+
Sbjct: 115 GESFRIGTSSTRRVAMLKHYCPQLATVDMRGNLQTRIRKLDEGHCDALLLAYAGVHRMGY 174
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLA 238
+ +I E L +++F P+ GQG+I IE + K A+ + ++INHE T + ERAFLA
Sbjct: 175 DDLIVERLPLDEFTPAVGQGSIAIEVATDALKSDIAEAITRLINHEPTAACLRAERAFLA 234
Query: 239 ELDGSCKSAIAGFA---YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L+G C +I FA + +T+ G +++ DG + +G+ ++ +G A+
Sbjct: 235 RLEGGC--SIPSFALAQWTDDTTVSLTGGLVSLDGSQLLRETFSGSAQESHLLGHSLAEA 292
Query: 296 I 296
I
Sbjct: 293 I 293
>gi|297583719|ref|YP_003699499.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10]
gi|297142176|gb|ADH98933.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10]
Length = 312
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 180/306 (58%), Gaps = 8/306 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LA+ +TR + ++ K+ P I ++T+GD I + TL+++GGKG
Sbjct: 3 RTITLGSRRSNLAMT---QTRWVISELEKLGLPFQFEIKEITTRGDEILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ + +GEID AVHS KD+P+ +GL +++ R D RD IS++ ++L +L
Sbjct: 60 LFVKEIEQAMHNGEIDMAVHSMKDVPSTRSEGLVLASVPKRYDPRDALISNSGKTLMELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181
S++GTSSLRR + +L R D+ + RG I+TRL K AI+LA AG++R+
Sbjct: 120 AGSIVGTSSLRRGSQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGLERVGWT 179
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E ++ E L+ + P+ GQGA+ +E ++ + +EL+ INHE T +V ERAFL ++
Sbjct: 180 EDIVTEFLDPDLCLPAVGQGALGLECREDDYELRELLAHINHEQTAITVAAERAFLRTVE 239
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A + + ++ +V ++DGK + S G D IG + A+ I
Sbjct: 240 GGCQVPIGAYATLDEQNQIHLTALVASTDGKQVFKESIIGE--DPEYIGTEVAERILRQG 297
Query: 301 NKNVFN 306
K V +
Sbjct: 298 AKGVLD 303
>gi|320449225|ref|YP_004201321.1| porphobilinogen deaminase [Thermus scotoductus SA-01]
gi|320149394|gb|ADW20772.1| porphobilinogen deaminase [Thermus scotoductus SA-01]
Length = 301
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 156/290 (53%), Gaps = 8/290 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LALA L + P + + T+GD+ N + +F +E
Sbjct: 6 VGTRGSALALAQTRFVVERLKE--SWPEAEFKVKTIKTRGDQGANPM-----EQAIFVKE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+++ L+S EID AVHS KD+PT+ GL+I+A R+D RD F+ + L+DL +V+
Sbjct: 59 LQEALLSREIDIAVHSLKDLPTEEPPGLKIAAIPRRQDPRDAFLGKVYKRLEDLPEGAVV 118
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL I +
Sbjct: 119 GTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGNGEYDGIILAAAGLIRLDLRNRIDQ 178
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L C +
Sbjct: 179 FLEPEVLLPAPGQGALALEVRQGDDLAEELCYALHHHPSHDRVRAERAFLKGLGAGCLAP 238
Query: 248 IAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ A + TL G+VL DGK F G+ +A +G + AQ +
Sbjct: 239 VGALAQVAEDGTLLLEGMVLTPDGKSFIRAEIEGDASEAEELGLELAQDV 288
>gi|254804423|ref|YP_003082644.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14]
gi|254667964|emb|CBA04229.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14]
Length = 311
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQASAEYADALGRAVAKKL 294
>gi|241759313|ref|ZP_04757419.1| hydroxymethylbilane synthase [Neisseria flavescens SK114]
gi|241320449|gb|EER56746.1| hydroxymethylbilane synthase [Neisseria flavescens SK114]
Length = 325
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
GSC+ +A + + L G+V DG + + A +GR A+
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306
>gi|328675303|gb|AEB27978.1| Porphobilinogen deaminase [Francisella cf. novicida 3523]
Length = 300
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 157/268 (58%), Gaps = 3/268 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL + + IP I + T+GD I ++ L ++GGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKKYIQKELNIPCE---ITTMKTQGDIILDKPLNKVGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + +G+ + AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMQNGKANIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL++ + AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLVIKDLRGNVQTRLSKLDSGEYDAIILASAGLIRLELNE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDRDVELLEKLQKLNCSTSFRMATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C AI +A + + +V +SDGK
Sbjct: 239 CHVAIGAYAELNNNQITLTAMVASSDGK 266
>gi|17229370|ref|NP_485918.1| porphobilinogen deaminase [Nostoc sp. PCC 7120]
gi|17130968|dbj|BAB73577.1| porphobilinogen deaminase [Nostoc sp. PCC 7120]
Length = 336
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 169/309 (54%), Gaps = 9/309 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG
Sbjct: 22 RRTIRIGSRKSQLALVQTYWVREQLQN--SFPDINFEVHTMSTQGDKILDVALAKIGDKG 79
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120
LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H ++ KD
Sbjct: 80 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVH--ENFKDKQ 137
Query: 121 ---LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++
Sbjct: 138 IDTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQ 197
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL
Sbjct: 198 RLGMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFL 257
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R
Sbjct: 258 RSLEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLR 317
Query: 298 FISNKNVFN 306
+ + N
Sbjct: 318 EQGAQEILN 326
>gi|294507567|ref|YP_003571625.1| Porphobilinogen deaminase [Salinibacter ruber M8]
gi|294343895|emb|CBH24673.1| Porphobilinogen deaminase [Salinibacter ruber M8]
Length = 323
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 171/308 (55%), Gaps = 13/308 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +GTR S LAL A RS L + H + + ++T+GD T+ ++EIG + +F
Sbjct: 6 PLVLGTRGSELALRQANVVRSRL----EAAGHRVELETITTRGDEATDTPISEIGDEAVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLA 122
T+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H + L DL
Sbjct: 62 TKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGHLHDLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ + T+SLRR A LL WRSD+ V+ RG ++TRL KL+ + ++LA AG+ RL
Sbjct: 122 EGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLSESDWTGMVLAVAGLVRLGLS 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELD 241
I++ ++ P+ GQGA+ I + ++L++ ++H + + N ERAFL ++
Sbjct: 182 LHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAFLKKVG 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRF 298
G C+ + +A+ TL + A DG E R+ RC D +GR+ A +
Sbjct: 242 GGCQVPLGAWAHIDDGTLVLDACIAALDGS---EHYRDERRCAPEDGAAVGRELAADLLA 298
Query: 299 ISNKNVFN 306
+ ++ +
Sbjct: 299 MGGDHILD 306
>gi|182416929|ref|ZP_02948313.1| porphobilinogen deaminase [Clostridium butyricum 5521]
gi|237667199|ref|ZP_04527183.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379227|gb|EDT76728.1| porphobilinogen deaminase [Clostridium butyricum 5521]
gi|237655547|gb|EEP53103.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 292
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 160/289 (55%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+ TR S LA SL + ++I+ T+GDR + +L +IGGKGLF ++
Sbjct: 6 LATRKSRLAQVQTEIVMDSLKNKINKESEKLLIV---TEGDRKLDVSLNKIGGKGLFVKD 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L+ G D AVHS KD+P +L +I+A + REDIRDV IS S L + I
Sbjct: 63 IECALLEGSADAAVHSMKDVPYELSNEFEITAIIEREDIRDVLISKDGISFSKLRYGAKI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR A L RSDI V+ RG ++TRL K+ + I+LA AGI RLK + +I E
Sbjct: 123 GTSSIRRAAQLKLLRSDIEVVPIRGNVQTRLAKMESENLDGIILAAAGIHRLKLDSIITE 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++F P+ QGAI IE V N + + K++++ + +V ER+F+ EL G C S
Sbjct: 183 YFDPKEFIPAVSQGAIGIEC-VKNSENSKYFKMLDNSEARITVEAERSFMRELKGDCHSL 241
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ G LY GI + + ++ G + + + +GR A+ I
Sbjct: 242 IGAYSEVTGDELYMIGIYDLNGVIVRKDI--KGKKSNHLEVGRKLAEKI 288
>gi|15838228|ref|NP_298916.1| porphobilinogen deaminase [Xylella fastidiosa 9a5c]
gi|11386846|sp|Q9PCX7|HEM3_XYLFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|9106679|gb|AAF84436.1|AE003989_13 hydroxymethylbilane synthase [Xylella fastidiosa 9a5c]
Length = 305
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 154/270 (57%), Gaps = 3/270 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRMLR--PDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274
+ +A + + G+V +DG++
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVR 271
>gi|323701815|ref|ZP_08113485.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574]
gi|323533119|gb|EGB22988.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574]
Length = 309
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 164/305 (53%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGK 61
K+ ++G+R S LAL ++TR + + + PH + I+ + TKGD++ + L +IG K
Sbjct: 2 KRKIKVGSRDSALAL---WQTRWVVAQLEQQNPHLSFEIVTMKTKGDKMLDVALAKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E +++ EID AVHS KDMPT L GL I A R++ D IS + L +L
Sbjct: 59 GLFTKELELAMLNKEIDFAVHSLKDMPTALPAGLTIGAVCKRDNPGDALISKDGRKLAEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR A LL +R D + RG + TR+ K+ + + AI+LA AGI R+
Sbjct: 119 PQGARIGTSSLRRCAQLLNYRPDFRLEALRGNLNTRMKKMASQQLDAIILAAAGIYRMGW 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+I EI+ P+ GQGAI +E ++ + +L++ + H+ T + + ER+ L L+
Sbjct: 179 SDMIAEIIPFNVCLPAVGQGAIAVECREDDIEINQLLQGVEHQPTRVATDAERSLLRRLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + L IV DG+ G A +G + A + +
Sbjct: 239 GGCQVPIGAYGEVIEDRLSLQAIVATLDGQRLIRAQGEGALNQAEELGIEVADKLLSMGG 298
Query: 302 KNVFN 306
K +
Sbjct: 299 KEILQ 303
>gi|300087569|ref|YP_003758091.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527302|gb|ADJ25770.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 301
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 154/293 (52%), Gaps = 3/293 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+G+R S LALA A ++ L P I+ +ST+GDR ++ E+ G G
Sbjct: 2 RKIRLGSRSSRLALAQAEYLQARLR--AAFPEVEFDIVRISTQGDRNRLVSMGELPGVGF 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L +GE D AVHS KD+P +L ++A RED RDV IS + L L +
Sbjct: 60 FVKEIESALAAGEADIAVHSLKDVPVELPPEFILAAVPEREDTRDVLISR-GRKLDQLPV 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+G+ SLRR + R D+ V RG IETR+ + + A++LA AG+ RL E
Sbjct: 119 GAVVGSDSLRRSFQIRARRPDVEVRSIRGNIETRIKAVEEGRVDAVILAAAGLHRLGLET 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L + +F P PGQ A+ IE N+ ++E +NH T +V ER+FL L G
Sbjct: 179 RIDEYLPLTEFLPPPGQAALGIEVRKNDDFSRETAGAVNHPPTCLAVTAERSFLRRLGGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C++ IA +G L G+V G+ S +G A +G A+ I
Sbjct: 239 CRAPIAALGTVEGDVLTLRGMVADEAGRNIISRSLSGTASAAEAVGGALAEMI 291
>gi|237809861|ref|YP_002894301.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187]
gi|237502122|gb|ACQ94715.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187]
Length = 308
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 161/292 (55%), Gaps = 3/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L ++H P + ++P+ST+GD+I + L +IGGKGLF
Sbjct: 4 LRIATRKSPLALWQANFVKQQL-ELHH-PGLQVTLVPMSTQGDKILDTPLAKIGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ ++ D AVHS KD+P GL ++ R+D D F+S S+ +L +
Sbjct: 62 KELEQAMLENRADIAVHSMKDVPVDFPDGLGLAVICERDDPYDAFVSSRFASVYELPEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG++RL K + I
Sbjct: 122 VVGTSSLRRQCQLRAQRPDLVIRDLRGNVNTRLAKLDAGDYDAIILAAAGLRRLDKAERI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE + + + L+ + H T V ERA L G C+
Sbjct: 182 RSRLPPELSLPANGQGAVGIECRLGDTQTLALLASLEHATTRYCVMAERAMNRTLQGGCQ 241
Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I FA + + L+ G+V + DGK +G + A +G+ A+ +
Sbjct: 242 VPIGAFAEMQDNDHLWLRGLVGSVDGKQIIHGDISGPKEQAEELGKLLAEQL 293
>gi|313676857|ref|YP_004054853.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126]
gi|312943555|gb|ADR22745.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126]
Length = 311
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 153/269 (56%), Gaps = 7/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A ++ + + H I + TKGD+I + +++IG KG+FT
Sbjct: 3 IRIGTRGSKLALWQAEYVKTRI----EKAGHTAEIKIIQTKGDKILDVAISKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124
EEIE +L G ID AVHSAKDM ++L +G + A+ RE + DV +SH + D
Sbjct: 59 EEIEAQLEDGNIDIAVHSAKDMQSELPQGFDLIAFTEREKVNDVLVSHKDSIDINDKDNP 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
VIGTSS RR A L + I +D RG ++TR+ K+ AILLAYAG+ R++ +
Sbjct: 119 IVIGTSSTRRIATLKHFYPHIKTVDIRGNLQTRIRKMEEGLCDAILLAYAGVHRMEYDDK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
IK L+ ++F P+ GQG++ IE H + + K Q L +NH +T + ERA+L L G
Sbjct: 179 IKLELSTQEFIPAVGQGSVAIEVHESIEDDKKQMLRFALNHRNTEYCLRAERAYLRHLQG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C + G A +++ +++ DG+
Sbjct: 239 GCSIPVFGLATLNSNSIEMEAGIISLDGQ 267
>gi|189351191|ref|YP_001946819.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
gi|189335213|dbj|BAG44283.1| hydroxymethylbilane synthase [Burkholderia multivorans ATCC 17616]
Length = 333
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 79 LESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAGAVV 138
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+
Sbjct: 139 GTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRA 198
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC+
Sbjct: 199 LLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSCEVP 258
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGR 290
+A A + LY G V DG E + DA+ +GR
Sbjct: 259 LAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGR 304
>gi|11386777|sp|O69110|HEM3_PAEMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3172405|gb|AAC18587.1| porphobilinogen deaminase [Paenibacillus macerans]
Length = 324
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 155/256 (60%), Gaps = 6/256 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTE 57
M K+ +GTR S LAL + L ++ H +P I + TKGDRI + TL++
Sbjct: 1 MTKRTIVVGTRQSQLALTQTEQVIGDLKELCRAHGLP-FEFEIKKIVTKGDRILDVTLSK 59
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQ 116
IGGKGLF +EIE+ ++ GEID AVHS KDMP+ L +GL I+ +P R+D RD IS +
Sbjct: 60 IGGKGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGL-INGGVPLRKDPRDALISRSGL 118
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L +L + +GTS+LRR + LL +R D+ + RG I++RL KL AI+LA AG+
Sbjct: 119 HLHELPQGARVGTSTLRRSSQLLAYRPDLVLEPVRGNIDSRLRKLEEEGFDAIILAAAGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+R+ E + L+ + P+ GQGA+ IE N+ + ++++ + N DT +V ER F
Sbjct: 179 QRMGWENRVTAYLSADVCLPAVGQGALGIECRENDAELRDVLSLYNDPDTALTVAAERRF 238
Query: 237 LAELDGSCKSAIAGFA 252
LA L+G C+ IA +A
Sbjct: 239 LAVLNGGCQVPIAAYA 254
>gi|229105103|ref|ZP_04235754.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28]
gi|228678284|gb|EEL32510.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28]
Length = 309
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 156/270 (57%), Gaps = 8/270 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273
+ IAG+A K + +V + DG +
Sbjct: 242 QVPIAGYATLTKDDAIELTALVGSMDGSVL 271
>gi|73540406|ref|YP_294926.1| porphobilinogen deaminase [Ralstonia eutropha JMP134]
gi|72117819|gb|AAZ60082.1| hydroxymethylbilane synthase [Ralstonia eutropha JMP134]
Length = 334
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 153/277 (55%), Gaps = 2/277 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 23 IASRESRLAMWQAEYVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLFVKE 80
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G D AVHS KD+P +L G ++A + RED RD +S T SL+++ +V+
Sbjct: 81 LEFAMAEGRADLAVHSLKDVPMELPDGFALTAVMEREDPRDALVSSTFASLEEMPAGTVV 140
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL I+
Sbjct: 141 GTSSLRREAALRARYPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDRIRA 200
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+ GQGA+ IE P + +NH+ T +V ERA L GSC+
Sbjct: 201 LIAPEASLPAAGQGALGIEILSTRPDVAAWLSPLNHQPTALAVTAERAVSRMLGGSCQVP 260
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
+A A G L V DG S G D
Sbjct: 261 LAAHARWVGDQLRLDAFVAMPDGSRQTRASAAGLVVD 297
>gi|325841152|ref|ZP_08167277.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1]
gi|325490009|gb|EGC92355.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1]
Length = 301
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 157/290 (54%), Gaps = 3/290 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL L H + II TKGD I + +L +IG KGLF E
Sbjct: 5 VGTRGSKLALTQTQWVIDQLRKYHPEVEFEVKII--KTKGDLIQHVSLDKIGDKGLFVRE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126
IE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL +
Sbjct: 63 IEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKGAK 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++I
Sbjct: 123 IGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEMIS 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C
Sbjct: 183 SYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGCHI 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + +G L G+ + +G G I +G + AQ++
Sbjct: 243 PMGAYCELEGEKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFV 292
>gi|295095182|emb|CBK84272.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 273
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 140/254 (55%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL L SV+GTSSLRR+ L R D+ + RG + TRL KL+
Sbjct: 61 REDPRDAFVSNRYDSLDALPAGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
N AI+LA AG+KRL E+ I+ L E P+ GQGA+ IE + + + Q L+ +N
Sbjct: 121 NGDYDAIILAVAGLKRLGLEERIRVALPPELSLPAVGQGAVGIECRLVDARTQALLAPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H+DT V ERA L+G C+ I +A L+ +V A DG R G
Sbjct: 181 HDDTAVRVKAERAMNTRLEGGCQVPIGSYAELTDGELWLRALVGAPDGSQMVRGERRGKP 240
Query: 283 CDAINIGRDAAQYI 296
DA +G A+ +
Sbjct: 241 QDAEALGVSLAEEL 254
>gi|320335860|ref|YP_004172571.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211]
gi|319757149|gb|ADV68906.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211]
Length = 313
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 156/294 (53%), Gaps = 5/294 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGGK 61
+ +GTR S LALA + L + P I +STKGDR + TL + G K
Sbjct: 6 RSITVGTRGSALALAQTRWVVARLK--EEWPDTEFRIQTISTKGDRDRSSLETLAQKGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120
G + +EIE L+S ID AVHS KD+PT +GL+IS+ R + RD I + L D
Sbjct: 64 GFWVKEIEDALLSSRIDIAVHSLKDLPTAQPEGLEISSIPKRVEARDALIGKEGMKRLVD 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRKA L +R D+ V D RG ++TRL L N+ AI+LA AG+ RL+
Sbjct: 124 LPQGARIGTSSVRRKAFLRAFRPDLDVKDLRGNVDTRLAALAGNEYDAIILAAAGLTRLE 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+++ + P+PGQGA+ +ET ++ A E+ I+ T D ER FLA L
Sbjct: 184 MRNRIDELVDPDILLPAPGQGALALETRSDDDLAVEVAYAIHDRATDDRTTAEREFLAGL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C + + A KG L G V A DG + G+ + ++G A+
Sbjct: 244 GAGCMAPVGALATLKGGVLTLEGWVGALDGTQVIRATIEGDADECADLGAQLAE 297
>gi|309379620|emb|CBX21791.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 326
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKL 309
>gi|239946738|ref|ZP_04698491.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921014|gb|EER21038.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 350
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 150/248 (60%), Gaps = 5/248 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL +T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 6 RIGTRKSPLAL---IQTNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L R+D RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAVLERKDPRDVFVCLNYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EKV 184
VIG+S++RRKA + + R D+ FRG +++R+ KL + A +LAYAG+KRL
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKATVFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHIPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFA 252
++ IA ++
Sbjct: 243 RTPIAAYS 250
>gi|94984201|ref|YP_603565.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300]
gi|123257361|sp|Q1J288|HEM3_DEIGD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94554482|gb|ABF44396.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300]
Length = 309
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 160/289 (55%), Gaps = 5/289 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGGKGLFT 65
+GTR S LALA + L + + P + I +STKGDR ++L + G KG +
Sbjct: 6 VGTRGSALALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRDRAALQSLAQKGDKGFWV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALH 124
+EIE L++G ID AVHS KD+PT+ +GL+I++ R D RDV I + L+DL
Sbjct: 64 KEIEDALLAGRIDIAVHSLKDLPTEQPEGLEIASIPKRVDARDVLIGKDGMKRLEDLPSG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS+RRKA L +R D+ ++D RG I+TRL L AI+LA AG+ R +
Sbjct: 124 ARVGTSSVRRKAFLRAYRPDLQILDLRGNIDTRLAALGTPDYDAIVLAAAGLIRTEMRHR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E ++ + P+PGQGA+ +ET ++ + E+V I+ T D V ER FLA L C
Sbjct: 184 IDEFIDPDLLLPAPGQGALALETRADDDLSIEVVYAIHDHATDDRVTAEREFLAGLGAGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ + A K L G V A DG + +G+ + ++G + A
Sbjct: 244 MAPVGAHATLKDGVLTLEGWVGALDGSQVIRATTSGDPAECADLGAELA 292
>gi|34557903|ref|NP_907718.1| porphobilinogen deaminase [Wolinella succinogenes DSM 1740]
gi|55976472|sp|Q7M8L2|HEM3_WOLSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|34483621|emb|CAE10618.1| PORPHOBILINOGEN DEAMINASE [Wolinella succinogenes]
Length = 311
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 160/288 (55%), Gaps = 5/288 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A ++ L H+ + I+ TKGD+I + L ++GGKGLFT+E
Sbjct: 6 IGTRGSVLALWQAEYVKAELERAHEGLSVELKIV--KTKGDKILDVPLAKVGGKGLFTKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ GEID AVHS KD+P +L++GL +SA RED+RD F+S SL+ L L + +
Sbjct: 64 LEEMMLQGEIDLAVHSLKDVPVELIEGLTLSAITEREDVRDCFLSDKYASLETLPLGAKV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR + RSD+ RG ++TR+ +L AI+LA AG+ RL K +
Sbjct: 124 GTTSLRRSMQIKSMRSDLDTESLRGNVQTRIKRLKEGDFDAIILATAGVNRLDLWKEVNY 183
Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ I E P+ GQ A+ IE +A L +++ + ER F+ L+G C+
Sbjct: 184 VIPIDTEMMIPAMGQAALGIECK-EGSEAFRLTQILEDKKARIETTAEREFVRVLEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
I AY +G TL+ V DG + + +A+ +GR+ A
Sbjct: 243 VPIGANAYLEGETLHLKVAVGLPDGSEILMDRLSAPKGEAVRLGRELA 290
>gi|242373962|ref|ZP_04819536.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1]
gi|242348316|gb|EES39918.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1]
Length = 308
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 174/292 (59%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L ++ P +I I + TKGD+I ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDELKEIE--PDLDIEIKEIVTKGDKIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + +ID A+HS KD+P+ + +GL + RE D +IS L +L S++
Sbjct: 64 IQNELFNKDIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELPEGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L + + RG I+TRLNKL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLNKLETEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + +L+K +++ + V ER FL+E+DGSC+
Sbjct: 184 TYLDKDILLPAIGQGALGIECRSDDEELLDLLKKVHNHEVAQCVTAERTFLSEMDGSCQV 243
Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I G+A G S + F G+++ DGK +E + G+ + + +G++ ++ ++
Sbjct: 244 PIGGYATIDGNSQIEFTGLIMTPDGKERYEHTARGH--NPVELGQEVSRVLK 293
>gi|75910970|ref|YP_325266.1| porphobilinogen deaminase [Anabaena variabilis ATCC 29413]
gi|75704695|gb|ABA24371.1| hydroxymethylbilane synthase [Anabaena variabilis ATCC 29413]
Length = 336
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 167/309 (54%), Gaps = 9/309 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG
Sbjct: 22 RRTIRIGSRKSQLALVQTYWVREQLQN--SFPDINFEVHTMSTQGDKILDVALAKIGDKG 79
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120
LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H ++ KD
Sbjct: 80 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVH--ENFKDKQ 137
Query: 121 ---LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++
Sbjct: 138 IDTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQ 197
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I ++L E + GQGA+ IE N+ + ++K I H T D ER+FL
Sbjct: 198 RLGMGDRIHQVLPKEVSLHAVGQGALGIECRANDAELITILKAIEHPQTRDRCLAERSFL 257
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I G L G+V + DG+ + + +G+ DA IG A+ +R
Sbjct: 258 RSLEGGCQVPIGVNTEINGDELILTGVVASVDGQNLVKDTVSGDASDAEAIGIRLAELLR 317
Query: 298 FISNKNVFN 306
+ + N
Sbjct: 318 EQGAQEILN 326
>gi|293374464|ref|ZP_06620786.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909]
gi|292646843|gb|EFF64831.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909]
Length = 301
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 157/290 (54%), Gaps = 3/290 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL L H P + + TKGD I + +L +IG KGLF E
Sbjct: 5 VGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFVRE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126
IE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL +
Sbjct: 63 IEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKGAK 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++I
Sbjct: 123 IGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEMIS 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C
Sbjct: 183 SYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGCHI 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + +G L G+ + +G G I +G + AQ++
Sbjct: 243 PMGAYCELEGDKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFV 292
>gi|169831506|ref|YP_001717488.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator
MP104C]
gi|238058920|sp|B1I4L8|HEM3_DESAP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169638350|gb|ACA59856.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator
MP104C]
Length = 309
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 157/287 (54%), Gaps = 4/287 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ +GTR S LALA A L + P + V + T GD I L +IG KG
Sbjct: 2 RREVVVGTRGSRLALAQADWVIDHLR--ARYPRVSFVRKEIRTTGDNILEVALAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ L+ EID AVHS KD+PT L +GL I A RE DVFIS + L++L
Sbjct: 60 LFTKELEQALLHREIDLAVHSMKDLPTGLPEGLVIGAVSVREYPGDVFISRGGERLEELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR A LL +R D+ VI RG ++TRL KL+ A++LA+AG+ RL
Sbjct: 120 AGAVLGTSSLRRTAQLLAYRPDLQVIPVRGNVQTRLRKLDEGVVDALVLAWAGLFRLGLT 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + + + P+ GQGA+ IE ++ + E+++ I+H T +V ER L L+G
Sbjct: 180 ERVTHRIPVAMCLPAVGQGALGIEARADDAEILEMLRTIDHAPTRAAVQAERTLLRRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAIN 287
C+ + + L +V + DG +G +R +A+
Sbjct: 240 GCQVPVGALGRFRDGRLVLEAVVASLDGTELVRAQESGPADRPEALG 286
>gi|71899004|ref|ZP_00681170.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|71731250|gb|EAO33315.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
Length = 305
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 164/293 (55%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIATLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH-EVSRNGNRCDAINIGRDAAQYI 296
+ +A + + G+V +DG++ E+ + D +GR AQ +
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGD--MLGRAVAQCL 292
>gi|134300009|ref|YP_001113505.1| porphobilinogen deaminase [Desulfotomaculum reducens MI-1]
gi|189028090|sp|A4J6H7|HEM3_DESRM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134052709|gb|ABO50680.1| hydroxymethylbilane synthase [Desulfotomaculum reducens MI-1]
Length = 309
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 161/305 (52%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGK 61
K +G+R S LAL ++TR + + K P I + TKGD++ + L +IG K
Sbjct: 2 KHKITVGSRDSALAL---WQTRWVVEQLEKQNPDVTFEITTMKTKGDKMLDVALAKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E ++ EID AVHS KDMPT L +GL I A R++ D IS + L +L
Sbjct: 59 GLFTKELEVAMLQKEIDFAVHSLKDMPTALPEGLIIGAVCKRDNPGDALISKDGRKLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR A LL +R D + RG + TR+ KL + + I+LA AGI R+
Sbjct: 119 PKGARIGTSSLRRCAQLLNYRPDFQLEALRGNLNTRMKKLVSEQLDGIILAAAGITRMGW 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E +I EI+ + P+ GQGAI +E ++P+ L+K I H +T + ER+ L L+
Sbjct: 179 EDMIAEIIPFQVCLPAVGQGAISVECREDDPEILNLLKGIEHTETKAATEAERSLLRYLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + K + L +V DG A+ +G + A+ + +
Sbjct: 239 GGCQVPIGAHSEVKNNRLMLTAVVATLDGTKVIRAQGENEVNKAVELGIEVAEKLMAMGG 298
Query: 302 KNVFN 306
K +
Sbjct: 299 KKILE 303
>gi|313668981|ref|YP_004049265.1| porphobilinogen deaminase [Neisseria lactamica ST-640]
gi|313006443|emb|CBN87906.1| putative porphobilinogen deaminase [Neisseria lactamica 020-06]
Length = 326
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPKGAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKL 309
>gi|221211567|ref|ZP_03584546.1| porphobilinogen deaminase [Burkholderia multivorans CGD1]
gi|221168928|gb|EEE01396.1| porphobilinogen deaminase [Burkholderia multivorans CGD1]
Length = 333
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 79 LESALADGRADLAVHSLKDVPMMLPDGFALAAIMRREDPRDAFVSNDYASLDALPAGAVV 138
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+
Sbjct: 139 GTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRA 198
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC+
Sbjct: 199 LLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSCEVP 258
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGR 290
+A A + LY G V DG E + DA+ +GR
Sbjct: 259 LAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGR 304
>gi|161524048|ref|YP_001579060.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
gi|160341477|gb|ABX14563.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
Length = 402
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 90 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 147
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 148 LESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAGAVV 207
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+
Sbjct: 208 GTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRA 267
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC+
Sbjct: 268 LLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSCEVP 327
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGR 290
+A A + LY G V DG E + DA+ +GR
Sbjct: 328 LAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGR 373
>gi|226942049|ref|YP_002797123.1| porphobilinogen deaminase [Laribacter hongkongensis HLHK9]
gi|254800253|sp|C1D679|HEM3_LARHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226716976|gb|ACO76114.1| Hem3 [Laribacter hongkongensis HLHK9]
Length = 308
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 157/286 (54%), Gaps = 4/286 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R SPLA+ A R+ L ++ P + I+ ++T+GDRI ++TL +IGGKGL
Sbjct: 2 KQVVIASRESPLAMWQAEHIRARLQALY--PGLEVSILGITTQGDRILDKTLNKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + G+ D AVHS KD+P L +G ++A RED RD F+S SL +L
Sbjct: 60 FVKELELAMQEGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR++ + + V RG ++TRL KL+ + AI+LA +G+KR+ +
Sbjct: 120 GAVVGTASLRRESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L+ D P+ GQGA+ IE + L+ +NH T+ V ERA L S
Sbjct: 180 RIRMELSTADSLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGAS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG-KIFH-EVSRNGNRCDAIN 287
C+ + G+A L G V DG + H E + DA+
Sbjct: 240 CQIPVGGYAEQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALG 285
>gi|299533189|ref|ZP_07046573.1| porphobilinogen deaminase [Comamonas testosteroni S44]
gi|298718719|gb|EFI59692.1| porphobilinogen deaminase [Comamonas testosteroni S44]
Length = 314
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 156/273 (57%), Gaps = 7/273 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA+ A ++ L + H++ ++ ++TKGD+I +R L+++GGKGLF +E
Sbjct: 13 IATRESQLAMWQAEHVQAIL----RGRGHSVDLLGMTTKGDQILDRALSKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +V+
Sbjct: 69 LEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I+
Sbjct: 129 GTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERIRA 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 189 KFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCSMP 248
Query: 248 IAGFAYCKGSTLYF---YGIVLASDGKIFHEVS 277
+A + +G TL+ +G + S G + + S
Sbjct: 249 LAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQAS 281
>gi|221199353|ref|ZP_03572397.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M]
gi|221205745|ref|ZP_03578760.1| porphobilinogen deaminase [Burkholderia multivorans CGD2]
gi|221174583|gb|EEE07015.1| porphobilinogen deaminase [Burkholderia multivorans CGD2]
gi|221180638|gb|EEE13041.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M]
Length = 333
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 79 LESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAGAVV 138
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+
Sbjct: 139 GTSSLRREAMLRARYPHLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRA 198
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC+
Sbjct: 199 LLDVEDSPPAAGQGALGIEIAAHRADVAAWLEPLHDAQTALAVEAERMVSRALGGSCEVP 258
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGR 290
+A A + LY G V DG E + DA+ +GR
Sbjct: 259 LAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGR 304
>gi|258424087|ref|ZP_05686969.1| porphobilinogen deaminase [Staphylococcus aureus A9635]
gi|257845708|gb|EEV69740.1| porphobilinogen deaminase [Staphylococcus aureus A9635]
Length = 308
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 166/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L +L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSELPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLK 293
>gi|264679667|ref|YP_003279574.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2]
gi|262210180|gb|ACY34278.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2]
Length = 314
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 156/273 (57%), Gaps = 7/273 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA+ A ++ L + H++ ++ ++TKGD+I +R L+++GGKGLF +E
Sbjct: 13 IATRESQLAMWQAEHVQAIL----RGRGHSVDLLGMTTKGDQILDRALSKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +V+
Sbjct: 69 LEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I+
Sbjct: 129 GTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERIRA 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 189 RFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCSMP 248
Query: 248 IAGFAYCKGSTLYF---YGIVLASDGKIFHEVS 277
+A + +G TL+ +G + S G + + S
Sbjct: 249 LAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQAS 281
>gi|121634334|ref|YP_974579.1| porphobilinogen deaminase [Neisseria meningitidis FAM18]
gi|120866040|emb|CAM09778.1| putative porphobilinogen deaminase [Neisseria meningitidis FAM18]
gi|325131787|gb|EGC54488.1| porphobilinogen deaminase [Neisseria meningitidis M6190]
gi|325137677|gb|EGC60254.1| porphobilinogen deaminase [Neisseria meningitidis ES14902]
Length = 311
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQAPAEYADALGRAVAKKL 294
>gi|163942212|ref|YP_001647096.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4]
gi|229836104|sp|A9VIT8|HEM3_BACWK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|163864409|gb|ABY45468.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4]
Length = 309
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 155/270 (57%), Gaps = 8/270 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIF 273
+ IAG+A K + +V + DG +
Sbjct: 242 QVPIAGYATLKENDAIELTALVGSMDGSVL 271
>gi|228910299|ref|ZP_04074116.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200]
gi|228849359|gb|EEM94196.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200]
Length = 309
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 161/285 (56%), Gaps = 8/285 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ IAG+A K T+ +V + DG + + + G + + +
Sbjct: 242 QVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGTNPEEVGL 286
>gi|171463846|ref|YP_001797959.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193384|gb|ACB44345.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 321
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 157/264 (59%), Gaps = 2/264 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A + L ++ P ++ I+ ++T+GD+I +R L+++GGKGLF +E
Sbjct: 18 IASRESRLAMWQAEHVQDCLKKLY--PDCDVQILGMTTRGDQILDRALSKVGGKGLFVKE 75
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P + +G ++ + RED RD F+S+ SL+DL + +++
Sbjct: 76 LETALEDGRADLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEDLPIGAIV 135
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+++L + + RG ++TR+ KL+ + AI+LA AG+KRL E I+
Sbjct: 136 GTSSLRRESVLRAKFPHLVIQPLRGNLDTRMGKLDKGEYQAIILAAAGLKRLGLESRIRA 195
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L + + P+ GQGA+ IET +P ++ + +N T +V+ ER +L GSC+
Sbjct: 196 FLPYDPYTPAAGQGALGIETLSKHPNIKQWLAPLNDLPTLFAVSAERMVSRQLGGSCEVP 255
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271
+A A + + V ++DGK
Sbjct: 256 LAAHAVRDQNQMQIRSFVASTDGK 279
>gi|85710451|ref|ZP_01041515.1| porphobilinogen deaminase [Erythrobacter sp. NAP1]
gi|85687629|gb|EAQ27634.1| porphobilinogen deaminase [Erythrobacter sp. NAP1]
Length = 292
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 140/254 (55%), Gaps = 3/254 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A AFETR L H + ++P+ GD++ +R L EIGGK L+T+E++ L G+
Sbjct: 1 MAQAFETRERLCKAHGWAEGEVELVPVVASGDKVLDRPLAEIGGKALWTKELDAWLAEGK 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHSAKD+ T + +A+LPR D RD + A S+ D+ + +GTS+ RR +
Sbjct: 61 IDVAVHSAKDVETIRPDAFRFAAFLPRADRRDALVG--AASIADIPRGATVGTSAPRRAS 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D V+ FRG + TRL KL +A LA AG++RL + +V L D+ P
Sbjct: 119 QLLNLRPDCKVVTFRGNVATRLGKLEAGEADVTFLAAAGLERLGQSEV-GAPLETGDWIP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QG I +E ++ +A EL+ I+H T + ERA LA+L G+C S +A
Sbjct: 178 AAAQGVIALECRADDDEAGELLAAIDHAATRAELEAERALLAKLGGTCHSPVAVLCSGDA 237
Query: 257 STLYFYGIVLASDG 270
L + + DG
Sbjct: 238 GELTMRAALFSPDG 251
>gi|196034473|ref|ZP_03101882.1| porphobilinogen deaminase [Bacillus cereus W]
gi|228948178|ref|ZP_04110462.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|195993015|gb|EDX56974.1| porphobilinogen deaminase [Bacillus cereus W]
gi|228811536|gb|EEM57873.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 309
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 164/290 (56%), Gaps = 10/290 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAYINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ IAG+A + + +V + DG I + + G D +G +AA
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAA 289
>gi|152992229|ref|YP_001357950.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1]
gi|166217789|sp|A6Q7Y4|HEM3_SULNB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151424090|dbj|BAF71593.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1]
Length = 323
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 147/249 (59%), Gaps = 4/249 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A+ + + P + + +++KGD+I ++ L +GG
Sbjct: 1 MEK--LVIATRASNLALWQAYHIKERIETA--FPEVRVELNEITSKGDKILDKPLALVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG FT+E+E ++I+G AVHS KD+PT + +GL++ A R+D DVF+SHT +SL +
Sbjct: 57 KGHFTKELEDEMIAGNAHLAVHSLKDVPTYIPEGLELCAITERQDQSDVFLSHTYKSLSE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+ LL R D+ V D RG + TRL KL + AI+LAY G+ RL
Sbjct: 117 LPEGAVVGTTSLRRRMQLLEKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAYIGLYRLD 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I + ++ F P GQ A+ IE NN + +E+ +NHE T+ ER F++ +
Sbjct: 177 LLKDIPYVEKLDFFIPPMGQAALGIEIVANNDRIREIAMTLNHEPTFICTKVERDFISVI 236
Query: 241 DGSCKSAIA 249
C + +A
Sbjct: 237 GAGCSAPVA 245
>gi|326317960|ref|YP_004235632.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374796|gb|ADX47065.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 318
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 146/260 (56%), Gaps = 5/260 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L + H + ++ ++TKGD+I +RTL+++GGKGLF
Sbjct: 17 PIVIATRESRLALWQAEHVQALL----RARGHAVELLGMTTKGDQILDRTLSKVGGKGLF 72
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL
Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 133 AVVGTSSLRRQVLLQALRPDLDIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGMEDR 192
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC
Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252
Query: 245 KSAIAGFA-YCKGSTLYFYG 263
+A + TL G
Sbjct: 253 SVPLAAHGRWTDAGTLRLDG 272
>gi|253575681|ref|ZP_04853017.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845019|gb|EES73031.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 320
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 165/313 (52%), Gaps = 18/313 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTE 57
M K+ +GTR S LAL + L + H +P + I + TKGDRI + TL++
Sbjct: 1 MTKRTIVVGTRQSQLALTQTGQVIDDLKAICREHHLP-FDFEIRKIVTKGDRILDVTLSK 59
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
+GGKGLF +EIE+ +++GEID AVHS KDMP+ L GL A R D RD IS +S
Sbjct: 60 VGGKGLFVKEIEQAMLNGEIDLAVHSMKDMPSVLPDGLMNGAVPRRVDPRDALISRNGRS 119
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L + +GTSSLRR + L +R D + RG I++RL KL AI+LA AG+
Sbjct: 120 LDELPQGAKVGTSSLRRASQLRAYRPDFVLEPIRGNIDSRLRKLEEEGFDAIILAAAGLF 179
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I L E P+ GQGA+ IE ++ + + L+ + N DT +V ER FL
Sbjct: 180 RMGWEHRITAFLPAEVCLPAVGQGALGIECREDDDEVRRLLSLYNDPDTAVTVAAERRFL 239
Query: 238 AELDGSCKSAIAGFAY------CKGST----LYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L+G C+ I +A G T L G+V ++DG + S G D
Sbjct: 240 GVLNGGCQVPIGAYATLLPEEGASGETGRPRLRLTGMVGSADGTTILKESAEGT--DPTE 297
Query: 288 IGRDAAQYIRFIS 300
+G A R IS
Sbjct: 298 LGEQLAG--RLIS 308
>gi|87117972|gb|ABD20293.1| HemC [Shigella boydii]
Length = 272
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 144/259 (55%), Gaps = 2/259 (0%)
Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86
LM H P + ++P+ T GD I + L ++ GKGLF +E++ L+ D AVHS KD
Sbjct: 1 LMTSH--PGLVVELVPMVTPGDVILDTPLAKVCGKGLFVKELDVALLENRADIAVHSMKD 58
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
+P + +GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+
Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118
Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE
Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEVSLPAVGQGAVGIE 178
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+N+ + + L+ +NH +T V ERA L+G C+ I +A ++ +V
Sbjct: 179 CRLNDTRTRALLAALNHNETALRVTAERAMNTRLEGGCQVPIGSYAELVDGEIWLLALVG 238
Query: 267 ASDGKIFHEVSRNGNRCDA 285
A DG R G+ DA
Sbjct: 239 APDGSQIIRGERRGSPQDA 257
>gi|149181766|ref|ZP_01860257.1| porphobilinogen deaminase [Bacillus sp. SG-1]
gi|148850507|gb|EDL64666.1| porphobilinogen deaminase [Bacillus sp. SG-1]
Length = 310
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 162/291 (55%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL S L ++ + + TKGD+I + TL+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWVISQLKELDS--SFEFEVKEIVTKGDQILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ ++ EID AVHS KDMP +L +GL I RED RD FIS L DL ++I
Sbjct: 64 IEQAMLDKEIDMAVHSMKDMPAELPEGLCIGCIPEREDHRDAFISKDHVKLADLPAGAII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L R D+ + RG I+TRL KL AI+LA AG+ R+ V+
Sbjct: 124 GTSSLRRGAQILAQRPDLEIKWIRGNIDTRLGKLETEDYDAIILAAAGLSRMGWTSNVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ E P+ GQGA+ IE ++ + L+ + +V ER FL +++G C+
Sbjct: 184 EFLDPEVCVPAVGQGALSIECREDDEELLGLLGKFASDQVTKTVTAERTFLHKMEGGCQV 243
Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+A + + +V + DGK ++ + G+ D + +G +AA +
Sbjct: 244 PIAGYAELLQEEDVKLTVLVASPDGKDIYKETVTGS--DPVQVGEEAAALL 292
>gi|296314908|ref|ZP_06864849.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768]
gi|296838093|gb|EFH22031.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768]
Length = 311
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKL 294
>gi|71275417|ref|ZP_00651703.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon]
gi|71898589|ref|ZP_00680760.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|170730394|ref|YP_001775827.1| porphobilinogen deaminase [Xylella fastidiosa M12]
gi|238059006|sp|B0U2W8|HEM3_XYLFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71163717|gb|EAO13433.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon]
gi|71731713|gb|EAO33773.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|167965187|gb|ACA12197.1| Hydroxymethylbilane synthase [Xylella fastidiosa M12]
Length = 305
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 153/270 (56%), Gaps = 3/270 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMRQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274
+ +A + G+V +DG++
Sbjct: 242 VPVGAYASYGVGGMRLQGLVGCVADGRLVR 271
>gi|289550573|ref|YP_003471477.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01]
gi|289180105|gb|ADC87350.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01]
Length = 310
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 164/276 (59%), Gaps = 4/276 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L S+I
Sbjct: 64 IQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPDGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ + ++
Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+K ++++ D V ER FLA +DGSC+
Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDVELLALLKQVHNQQVADCVTAERTFLAAMDGSCQV 243
Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGN 281
I G+A K + F G+++ DGK +E + +GN
Sbjct: 244 PIGGYAMNKPNGDIEFTGLIMTPDGKERYEHTESGN 279
>gi|15893393|ref|NP_346742.1| porphobilinogen deaminase [Clostridium acetobutylicum ATCC 824]
gi|25453028|sp|Q97MU4|HEM3_CLOAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15022921|gb|AAK78082.1|AE007522_6 Hydroxymrthylbilane syntase (porphobilinogen deaminase)
[Clostridium acetobutylicum ATCC 824]
gi|325507505|gb|ADZ19141.1| porphobilinogen deaminase [Clostridium acetobutylicum EA 2018]
Length = 291
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 163/289 (56%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA + L D + I ++ + T GD+I +++L +IGGKGLF ++
Sbjct: 5 IATRKSKLAQVQTELIINVLKDKYGISSEKLL---METLGDKILDKSLADIGGKGLFIKD 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ + D AVHS KD+P ++ +I+A R D+RDVF+S KDL +VI
Sbjct: 62 IERILLEDKADAAVHSMKDVPFEVPDMFEIAAVTLRVDVRDVFVSRDGTHFKDLKNGAVI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS RR A L R DI V+ RG ++TR+ K+ K I+LA AG+KRL E +I +
Sbjct: 122 GTSSNRRAAQLKMLRDDIKVVPIRGNVQTRIRKMGEEKLDGIILAAAGLKRLNMENIITD 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++E+ P+ GQGA+ +E N K ++L + ++++++ V ER+F+ L+G C S
Sbjct: 182 YFSVEEMIPAVGQGALGVEIKKEN-KNRDLFRKLDNKNSRMCVEAERSFMRTLNGDCHST 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A + G ++ +VS GN D +++G+ A+ I
Sbjct: 241 IGAYAEIVNGQMNVLGFYEIDGRRVKKDVS--GNIEDYMSLGKTLAEKI 287
>gi|269215203|ref|ZP_05987933.2| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970]
gi|269208048|gb|EEZ74503.1| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970]
Length = 326
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKL 309
>gi|28199044|ref|NP_779358.1| porphobilinogen deaminase [Xylella fastidiosa Temecula1]
gi|182681767|ref|YP_001829927.1| porphobilinogen deaminase [Xylella fastidiosa M23]
gi|32129567|sp|Q87CC9|HEM3_XYLFT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059005|sp|B2I5K8|HEM3_XYLF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28057142|gb|AAO29007.1| hydroxymethylbilane synthase [Xylella fastidiosa Temecula1]
gi|182631877|gb|ACB92653.1| porphobilinogen deaminase [Xylella fastidiosa M23]
gi|307580196|gb|ADN64165.1| porphobilinogen deaminase [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 305
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 164/293 (55%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRKCVIAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH-EVSRNGNRCDAINIGRDAAQYI 296
+ +A + + G+V +DG++ E+ + D +GR AQ +
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGD--MLGRAVAQCL 292
>gi|15924660|ref|NP_372194.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927249|ref|NP_374782.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
N315]
gi|148268151|ref|YP_001247094.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH9]
gi|150394218|ref|YP_001316893.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1]
gi|156979988|ref|YP_001442247.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3]
gi|253317186|ref|ZP_04840399.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006455|ref|ZP_05145056.2| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794056|ref|ZP_05643035.1| porphobilinogen deaminase [Staphylococcus aureus A9781]
gi|258415760|ref|ZP_05682031.1| porphobilinogen deaminase [Staphylococcus aureus A9763]
gi|258422003|ref|ZP_05684923.1| porphobilinogen deaminase [Staphylococcus aureus A9719]
gi|258438239|ref|ZP_05689523.1| porphobilinogen deaminase [Staphylococcus aureus A9299]
gi|258443697|ref|ZP_05692036.1| porphobilinogen deaminase [Staphylococcus aureus A8115]
gi|258444935|ref|ZP_05693255.1| porphobilinogen deaminase [Staphylococcus aureus A6300]
gi|258447989|ref|ZP_05696121.1| porphobilinogen deaminase [Staphylococcus aureus A6224]
gi|258454303|ref|ZP_05702272.1| porphobilinogen deaminase [Staphylococcus aureus A5937]
gi|269203288|ref|YP_003282557.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED98]
gi|282893166|ref|ZP_06301400.1| porphobilinogen deaminase [Staphylococcus aureus A8117]
gi|282929344|ref|ZP_06336911.1| porphobilinogen deaminase [Staphylococcus aureus A10102]
gi|295405981|ref|ZP_06815789.1| porphobilinogen deaminase [Staphylococcus aureus A8819]
gi|296274902|ref|ZP_06857409.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MR1]
gi|297245093|ref|ZP_06928970.1| porphobilinogen deaminase [Staphylococcus aureus A8796]
gi|54037282|sp|P64341|HEM3_STAAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54041349|sp|P64340|HEM3_STAAM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217788|sp|A7X391|HEM3_STAA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028098|sp|A6U2D8|HEM3_STAA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028160|sp|A5ITJ5|HEM3_STAA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|13701467|dbj|BAB42761.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
N315]
gi|14247442|dbj|BAB57832.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50]
gi|147741220|gb|ABQ49518.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|149946670|gb|ABR52606.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1]
gi|156722123|dbj|BAF78540.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3]
gi|257788028|gb|EEV26368.1| porphobilinogen deaminase [Staphylococcus aureus A9781]
gi|257839353|gb|EEV63826.1| porphobilinogen deaminase [Staphylococcus aureus A9763]
gi|257842047|gb|EEV66476.1| porphobilinogen deaminase [Staphylococcus aureus A9719]
gi|257848283|gb|EEV72274.1| porphobilinogen deaminase [Staphylococcus aureus A9299]
gi|257851103|gb|EEV75046.1| porphobilinogen deaminase [Staphylococcus aureus A8115]
gi|257856143|gb|EEV79058.1| porphobilinogen deaminase [Staphylococcus aureus A6300]
gi|257858750|gb|EEV81621.1| porphobilinogen deaminase [Staphylococcus aureus A6224]
gi|257863533|gb|EEV86292.1| porphobilinogen deaminase [Staphylococcus aureus A5937]
gi|262075578|gb|ACY11551.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED98]
gi|282589076|gb|EFB94177.1| porphobilinogen deaminase [Staphylococcus aureus A10102]
gi|282764484|gb|EFC04610.1| porphobilinogen deaminase [Staphylococcus aureus A8117]
gi|285817354|gb|ADC37841.1| Porphobilinogen deaminase [Staphylococcus aureus 04-02981]
gi|294968978|gb|EFG44999.1| porphobilinogen deaminase [Staphylococcus aureus A8819]
gi|297178173|gb|EFH37421.1| porphobilinogen deaminase [Staphylococcus aureus A8796]
gi|312830049|emb|CBX34891.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315130698|gb|EFT86684.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727593|gb|EGG64049.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21172]
Length = 308
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 166/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFINKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLK 293
>gi|83815900|ref|YP_445675.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855]
gi|83757294|gb|ABC45407.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855]
Length = 323
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 169/308 (54%), Gaps = 13/308 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +GTR S LAL A RS L + H + + ++T+GD T+ ++EIG + +F
Sbjct: 6 PLVLGTRGSELALRQANVVRSRL----EAAGHRVELETITTRGDEATDTPISEIGDEAVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLA 122
T+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H + L DL
Sbjct: 62 TKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGHLHDLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ + T+SLRR A LL WRSD+ V+ RG ++TRL KL + ++LA AG+ RL
Sbjct: 122 EGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLGESDWTGMVLAVAGLVRLGLS 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELD 241
I++ ++ P+ GQGA+ I + ++L++ ++H + + N ERAFL ++
Sbjct: 182 LHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAFLKKVG 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRF 298
G C+ + +A+ TL + A DG E R+ RC D +GR A +
Sbjct: 242 GGCQVPLGAWAHIDDGTLVLDACIAALDGS---EHYRDERRCAPEDGAAVGRKLAADLLA 298
Query: 299 ISNKNVFN 306
+ ++ +
Sbjct: 299 MGGDHILD 306
>gi|57650542|ref|YP_186555.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL]
gi|87160322|ref|YP_494312.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195475|ref|YP_500279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221776|ref|YP_001332598.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509889|ref|YP_001575548.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142579|ref|ZP_03567072.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253732321|ref|ZP_04866486.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253734545|ref|ZP_04868710.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|258451815|ref|ZP_05699837.1| porphobilinogen deaminase [Staphylococcus aureus A5948]
gi|262048646|ref|ZP_06021529.1| porphobilinogen deaminase [Staphylococcus aureus D30]
gi|262052244|ref|ZP_06024449.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3]
gi|282920211|ref|ZP_06327936.1| porphobilinogen deaminase [Staphylococcus aureus A9765]
gi|284024719|ref|ZP_06379117.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 132]
gi|294848692|ref|ZP_06789438.1| porphobilinogen deaminase [Staphylococcus aureus A9754]
gi|304380738|ref|ZP_07363407.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|11386773|sp|O34090|HEM3_STAA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71152114|sp|Q5HFA2|HEM3_STAAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123749605|sp|Q2FG66|HEM3_STAA3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|172048933|sp|A6QHK4|HEM3_STAAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028161|sp|A8Z2J1|HEM3_STAAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|2589181|gb|AAC45833.1| porphobilinogen deaminase [Staphylococcus aureus]
gi|57284728|gb|AAW36822.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL]
gi|87126296|gb|ABD20810.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203033|gb|ABD30843.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150374576|dbj|BAF67836.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160368698|gb|ABX29669.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253723959|gb|EES92688.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253727486|gb|EES96215.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257860527|gb|EEV83353.1| porphobilinogen deaminase [Staphylococcus aureus A5948]
gi|259159845|gb|EEW44884.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3]
gi|259163293|gb|EEW47852.1| porphobilinogen deaminase [Staphylococcus aureus D30]
gi|269941151|emb|CBI49538.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
TW20]
gi|282594559|gb|EFB99544.1| porphobilinogen deaminase [Staphylococcus aureus A9765]
gi|294824718|gb|EFG41141.1| porphobilinogen deaminase [Staphylococcus aureus A9754]
gi|302751497|gb|ADL65674.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340737|gb|EFM06668.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|315198635|gb|EFU28963.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140451|gb|EFW32305.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143989|gb|EFW35758.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314344|gb|AEB88757.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
T0131]
gi|329728357|gb|EGG64794.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21189]
gi|329733184|gb|EGG69521.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21193]
Length = 308
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 244 PIAGYATISDQNEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLK 293
>gi|229098938|ref|ZP_04229873.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29]
gi|228684436|gb|EEL38379.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29]
Length = 309
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 155/270 (57%), Gaps = 8/270 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA +
Sbjct: 62 KEIEHALLMKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273
+ IAG+A K + +V + DG +
Sbjct: 242 QVPIAGYATLTKDDAIELTALVGSMDGSVL 271
>gi|325129681|gb|EGC52495.1| porphobilinogen deaminase [Neisseria meningitidis OX99.30304]
gi|325203630|gb|ADY99083.1| porphobilinogen deaminase [Neisseria meningitidis M01-240355]
Length = 311
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKL 294
>gi|319779685|ref|YP_004130598.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9]
gi|317109709|gb|ADU92455.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9]
Length = 313
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 157/267 (58%), Gaps = 2/267 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR S LA+ A + L + P N+ + ++TKGD+I ++TL++IGGKGL
Sbjct: 6 KNLRIATRESRLAVWQAEFVQKKLKSI--FPHLNVELHKMTTKGDQILDKTLSKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+SG D AVHS KD+P +L +I+ L RE+ D F+S+ ++ KDL
Sbjct: 64 FIKELESSLLSGVTDLAVHSLKDVPVELNDEFEIACILERENPMDAFVSNEYKTFKDLPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR++ + + V RG ++TRL KL++ + AI+LA AG+KRL
Sbjct: 124 GAIVGTSSLRRESQIRAKFPHLVVKPLRGNLDTRLKKLDDGQYSAIILAAAGLKRLNMMD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK ++I+D P+ GQGA+ IE + +E++ ++HE+T+ V+ ER L GS
Sbjct: 184 RIKSFVSIDDSLPAVGQGALAIEILKDKFALKEMLSYLHHEETFKCVSAERIVSQYLGGS 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ +A A +V + DG
Sbjct: 244 CQVPLAAHACVINDLFQVRALVASPDG 270
>gi|283470938|emb|CAQ50149.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ST398]
Length = 308
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDDELLSLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLK 293
>gi|115352519|ref|YP_774358.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD]
gi|122322497|sp|Q0BCU9|HEM3_BURCM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115282507|gb|ABI88024.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD]
Length = 328
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 14 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 71
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +
Sbjct: 72 KELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGA 131
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I
Sbjct: 132 VVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 191
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 192 RTLIDVEDSPPAAGQGALGIEIATHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSCE 251
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302
+A A + LY G V +DG+ G DA+ +GR + +
Sbjct: 252 VPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGAL 311
Query: 303 NVFN 306
++ N
Sbjct: 312 DIVN 315
>gi|152976881|ref|YP_001376398.1| porphobilinogen deaminase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189042874|sp|A7GTE5|HEM3_BACCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152025633|gb|ABS23403.1| porphobilinogen deaminase [Bacillus cytotoxicus NVH 391-98]
Length = 309
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 163/291 (56%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL L + P+ + + TKGD I + TL+++GGKGLF +E
Sbjct: 6 VGSRKSKLALTQTNWFIDQLQALG--LPYEFEVKEIVTKGDVILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ EID AVHS KDMP L GL I R D RD FIS +S K+LA + +
Sbjct: 64 IEHALLTKEIDMAVHSMKDMPAVLPAGLTIGCIPKRVDPRDAFISKNGKSFKELAKGATL 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIK 186
GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG+KR+ + VI
Sbjct: 124 GTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEENYDAIILATAGLKRMGWDNDVIT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C+
Sbjct: 184 EHLDESLCVPAVGQGALAIECREDDKDLLQLLAHMNDAATERTVAAERVFLHKLEGGCQV 243
Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+A + + + +V ++DG + + + G + +G +AA+ +
Sbjct: 244 PIAGYATLQENGKIKLHALVGSTDGSVLLKETVVGTNPE--TVGLEAAERL 292
>gi|49483913|ref|YP_041137.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425786|ref|ZP_05602210.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428452|ref|ZP_05604850.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431086|ref|ZP_05607463.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433769|ref|ZP_05610127.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436685|ref|ZP_05612729.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M876]
gi|282904242|ref|ZP_06312130.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
C160]
gi|282906067|ref|ZP_06313922.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908982|ref|ZP_06316800.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911298|ref|ZP_06319100.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914467|ref|ZP_06322253.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282919436|ref|ZP_06327171.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C427]
gi|282924813|ref|ZP_06332479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C101]
gi|283958422|ref|ZP_06375873.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503545|ref|ZP_06667392.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510560|ref|ZP_06669265.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M809]
gi|293537102|ref|ZP_06671782.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|295428242|ref|ZP_06820871.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590795|ref|ZP_06949433.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
MN8]
gi|55976402|sp|Q6GG35|HEM3_STAAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49242042|emb|CAG40741.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271480|gb|EEV03626.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275293|gb|EEV06780.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278034|gb|EEV08682.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281862|gb|EEV11999.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284036|gb|EEV14159.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M876]
gi|282313179|gb|EFB43575.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C101]
gi|282317246|gb|EFB47620.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C427]
gi|282321648|gb|EFB51973.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282324993|gb|EFB55303.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327246|gb|EFB57541.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331359|gb|EFB60873.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595860|gb|EFC00824.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
C160]
gi|283790571|gb|EFC29388.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919947|gb|EFD97015.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|291095211|gb|EFE25476.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466451|gb|EFF08972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M809]
gi|295127642|gb|EFG57279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575681|gb|EFH94397.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
MN8]
gi|298694941|gb|ADI98163.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED133]
gi|312437871|gb|ADQ76942.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH60]
gi|315195573|gb|EFU25960.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 308
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLK 293
>gi|254247511|ref|ZP_04940832.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184]
gi|124872287|gb|EAY64003.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184]
Length = 334
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 161/288 (55%), Gaps = 5/288 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +
Sbjct: 77 KELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGA 136
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I
Sbjct: 137 VVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 196
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 197 RALLDVEASPPAAGQGALGIEIAAHRDDVAAWLASLHDPQTALAVEAERMVSRALGGSCE 256
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290
+A A + LY G V +DGK G DA+ +GR
Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 304
>gi|255526355|ref|ZP_05393269.1| porphobilinogen deaminase [Clostridium carboxidivorans P7]
gi|255509932|gb|EET86258.1| porphobilinogen deaminase [Clostridium carboxidivorans P7]
Length = 290
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 159/291 (54%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR S LA L + H + +++ T GD+I + +L++IGGKGLF
Sbjct: 3 LKIATRRSQLAQVQTETIMKILKENHNVEAEKLLV---ETTGDKILDVSLSKIGGKGLFI 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ + D AVHS KD+P + I + PRED+RD F+S K+L +
Sbjct: 60 KEIEVALLEDKADAAVHSMKDVPFDVPDMFDIVSIPPREDVRDAFVSMNGVHFKELKKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A + R D+ ++ RG ++TR++K+ I+LA AG+KR+ E +I
Sbjct: 120 KIGTSSNRRAAQVKLLRPDLEIVPIRGNVQTRISKIEKENLDGIILAAAGLKRMNMENII 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ + P+ GQGA+ IET N+ +++ K + E+T V ER+F+ L+G C
Sbjct: 180 TDYFDVNEMVPAVGQGALGIETKKNSVN-EDIFKKMEDENTRICVEAERSFMRTLNGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
S I +A +T+ GI D I +++ GN+ D + +G A+ I
Sbjct: 239 STIGAYAQINENTISIIGIFQVGDNLIKRDIA--GNKEDYMELGYKLAKKI 287
>gi|91789512|ref|YP_550464.1| porphobilinogen deaminase [Polaromonas sp. JS666]
gi|91698737|gb|ABE45566.1| porphobilinogen deaminase [Polaromonas sp. JS666]
Length = 334
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 158/300 (52%), Gaps = 12/300 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L + ++ ++T+GD+I +R+L+++GGKGLF +E
Sbjct: 18 IATRESRLALWQAEHVKALLESRLG---WQVELLGMTTQGDQILDRSLSKVGGKGLFVKE 74
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++ L RED D F+S+ SL DL +V+
Sbjct: 75 LEVALSEGRADLAVHSLKDVPMDLPDGFALACVLEREDPHDAFVSNQFASLADLPQGAVV 134
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR LL R D+++ RG ++TRL KL+ HAI+LA AG+KRL + I+
Sbjct: 135 GTSSLRRLVLLKALRPDLNIEPLRGNLDTRLRKLDEGHYHAIVLAAAGLKRLGLQARIRG 194
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
I +D P+ GQGA+ IE + + + + H+ TW +V ER + GSC
Sbjct: 195 IFAPDDMLPAAGQGALGIEVRADRHDLMQALGTLAHQPTWLAVTAERTVSRAMGGSCSMP 254
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
+A AY +G S+G H + DA G+ A +R V +F
Sbjct: 255 LA--AYTEGPAAE------GSEGMQLHATWGDPATADA-PAGQPLAPLVRVQKTAVVRSF 305
>gi|77967966|gb|ABB09346.1| Porphobilinogen deaminase [Burkholderia sp. 383]
Length = 378
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 162/286 (56%), Gaps = 5/286 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 65 IASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLFVKE 122
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 123 LEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGAVV 182
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+
Sbjct: 183 GTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETRIRA 242
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 243 LLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSCEVP 302
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290
+A A + LY G V +DGK G DA+ +GR
Sbjct: 303 LAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 348
>gi|21283343|ref|NP_646431.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2]
gi|49486497|ref|YP_043718.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297207616|ref|ZP_06924051.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300911698|ref|ZP_07129142.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH70]
gi|23821677|sp|Q8NW74|HEM3_STAAW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|55976400|sp|Q6G8Q5|HEM3_STAAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21204783|dbj|BAB95479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2]
gi|49244940|emb|CAG43401.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296887633|gb|EFH26531.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300887119|gb|EFK82320.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH70]
gi|323440785|gb|EGA98494.1| porphobilinogen deaminase [Staphylococcus aureus O11]
gi|323442940|gb|EGB00563.1| porphobilinogen deaminase [Staphylococcus aureus O46]
Length = 308
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLK 293
>gi|49478646|ref|YP_038514.1| porphobilinogen deaminase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|55976410|sp|Q6HD62|HEM3_BACHK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49330202|gb|AAT60848.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 309
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG I + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRL 292
>gi|296136292|ref|YP_003643534.1| porphobilinogen deaminase [Thiomonas intermedia K12]
gi|294340528|emb|CAZ88912.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Thiomonas sp.
3As]
gi|295796414|gb|ADG31204.1| porphobilinogen deaminase [Thiomonas intermedia K12]
Length = 317
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 159/293 (54%), Gaps = 5/293 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L ++ P ++ I ++T+GD+I +++L +IGGKGLF +E
Sbjct: 13 IATRESRLALWQAEHVRDLLKGLY--PQCDVRIFGMTTQGDQILDKSLAKIGGKGLFVKE 70
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G D AVHS KD+P L G ++A + RED RD ++S +L DL +V+
Sbjct: 71 LEVAMEQGHADLAVHSLKDVPMVLPTGFALTAVMEREDPRDAWVSPHYANLADLPAGAVV 130
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + V RG ++TRL KL+ + ILLA AG+KRL + ++
Sbjct: 131 GTSSLRRESQLRARYPHLKVQALRGNLDTRLRKLDEGQYAGILLAAAGLKRLGLGERVRA 190
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ ED P+ GQ A+ IE + P + + +NH T + ERA L GSC +
Sbjct: 191 VIEPEDMLPAVGQAALGIEIRADRPDLAQALAALNHPPTALCTHAERAVSRGLGGSCTTP 250
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297
+ +A +G ++ ++ DG + G D A +G+ A+ +R
Sbjct: 251 MGAYATLEGEAMHLRAVLGLPDGSQALHAQQRGRVTDLAQAEALGQQVARQLR 303
>gi|320101752|ref|YP_004177343.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644]
gi|319749034|gb|ADV60794.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644]
Length = 332
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 154/293 (52%), Gaps = 3/293 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLA A + L D P + ++ + T GDR N L IGG GLFT
Sbjct: 19 VRIGTRGSPLARWQAEWVAARLRDAW--PGLTVELVEIKTLGDRDRNSPLASIGGAGLFT 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ L+ ++ AVHS KD+PT+ ++GL + A PRE+ RD I+ L+ L +
Sbjct: 77 KEIQRALLDCRVEIAVHSLKDLPTQPVEGLILGAVPPREEPRDALIAPAHGLLEHLPAAA 136
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT SLRR+A LL R D+ V+ RG +ETRLN + A+LLA AG++RL + I
Sbjct: 137 RVGTGSLRRRAQLLWMRPDLEVVGVRGNVETRLNHALEGRLDAVLLAVAGLRRLGLDSAI 196
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L DF P+ GQGA+ IE ++P L+ ++ + SV ERA LA+L+ C
Sbjct: 197 TQTLGPPDFLPAVGQGALGIECRGDDPDTLALLAPLDDPASRASVLAERALLADLEAGCM 256
Query: 246 SAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ + + L VL G+ +G D +G A +R
Sbjct: 257 VPLGAWGRSEADGLLALDAAVLDPAGRQRLAAHASGPANDPQTLGLAVAAELR 309
>gi|68171155|ref|ZP_00544563.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657743|ref|YP_507506.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas]
gi|123722778|sp|Q2GGC7|HEM3_EHRCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|67999425|gb|EAM86066.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599200|gb|ABD44669.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas]
Length = 298
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 162/290 (55%), Gaps = 9/290 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+A E ++ L P ++ I+ + T GD L+ IGGK LF
Sbjct: 3 IRIGTRGSILAIAQTLEIKNLLN--RYFPEISVQIVKIKTSGDINNQVPLSAIGGKSLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G++D AVHS KD+P +GL I L R DVFIS + +K L L++
Sbjct: 61 KEIEEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RRK L R D+ V+ RG I+TR+ K N + I+LA AG+ R+ + VI
Sbjct: 121 TIGTSSVRRKVQLNYLRPDLQVVPVRGNIDTRILKANVGEFDGIVLAEAGLIRINRCDVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KEIL+ + + GQGAI I+ V++ +KV+N ++ V ER+FL ++GSC
Sbjct: 181 KEILSPKIMLSAVGQGAIGIQCRVDDHSIINKIKVLNCHQSYVCVMAERSFLKTINGSCD 240
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA----INIGR 290
+ +A A Y T++ ++ +F S N CDA IN+G+
Sbjct: 241 TPLAALAQYVNNDTIHMSCMLANEKNMVF--ASCCFNECDAEKSGINMGK 288
>gi|282916930|ref|ZP_06324688.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
D139]
gi|283770735|ref|ZP_06343627.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19]
gi|282319417|gb|EFB49769.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
D139]
gi|283460882|gb|EFC07972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19]
Length = 308
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLK 293
>gi|161702955|ref|YP_369990.2| porphobilinogen deaminase [Burkholderia sp. 383]
Length = 334
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 162/288 (56%), Gaps = 5/288 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLFV 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +
Sbjct: 77 KELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGA 136
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I
Sbjct: 137 VVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETRI 196
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 197 RALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 256
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290
+A A + LY G V +DGK G DA+ +GR
Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 304
>gi|332975659|gb|EGK12548.1| porphobilinogen deaminase [Psychrobacter sp. 1501(2011)]
Length = 339
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 158/278 (56%), Gaps = 13/278 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLA+ A +S L ++ P + ++ + T+GD+I + L +IGGKGL
Sbjct: 11 KTLNIATRKSPLAMWQAEHIKSRLESLY--PELEVNLVTMVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P +L +GL + Y RE D F+S+ L+DL
Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMQLPEGLILGTYCKRETPTDAFVSNNYDKLEDLPE 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR+ + +R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ +
Sbjct: 129 GAVVGTASLRRQCQIKAFRPDLQIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK+ ++I+ P+ GQGA+ IE ++ EL+K +N + ERA L+G
Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDEAVLELLKPLNDGQARIRLKAERALNRRLEGG 248
Query: 244 CKSAIAGFAYCKGS-----------TLYFYGIVLASDG 270
C+ IA +A + TL+ G V + DG
Sbjct: 249 CQVPIAAYAVIEKDSEPSDQQIFQKTLWLRGRVGSEDG 286
>gi|170733765|ref|YP_001765712.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3]
gi|238058731|sp|B1JWR0|HEM3_BURCC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169817007|gb|ACA91590.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3]
Length = 334
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 161/288 (55%), Gaps = 5/288 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +
Sbjct: 77 KELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGA 136
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I
Sbjct: 137 VVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 196
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 197 RALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 256
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290
+A A + LY G V +DGK G DA+ +GR
Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 304
>gi|134296607|ref|YP_001120342.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4]
gi|166201499|sp|A4JGV4|HEM3_BURVG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134139764|gb|ABO55507.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4]
Length = 333
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 5/302 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 79 LENALADGRADLAVHSLKDVPMALPDGFALAAIMAREDARDAFVSNDYASLDALPAGAVV 138
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E I+
Sbjct: 139 GTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRA 198
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++++ED P+ GQGA+ IE + + + ++ T +V ER L GSC+
Sbjct: 199 LIDVEDSLPAAGQGALGIEIAAHRSDVAQWLAPLHDPHTALAVEAERMVSRALGGSCEVP 258
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNV 304
+A A + LY G V +DG+ G DA+ +GR + + +++
Sbjct: 259 LAAHAVWRAGELYLTGRVSTTDGRRVLSAQACGAVMTAADALALGRAVSDELDAQGARDI 318
Query: 305 FN 306
N
Sbjct: 319 VN 320
>gi|189184545|ref|YP_001938330.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda]
gi|238054423|sp|B3CUP9|HEM3_ORITI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189181316|dbj|BAG41096.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda]
Length = 298
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 152/253 (60%), Gaps = 4/253 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+G+R S LAL A ++ + ++ + N +IIP+ T GD I N+ L +IGGKGLF +
Sbjct: 4 RVGSRASRLALIQA---QAVVQKINDLLGLNAIIIPIKTTGDLIQNKNLYDIGGKGLFLK 60
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE L++ ID AVHS KD+P L GLQ++A L R ++ D+ +S A + DL L +
Sbjct: 61 EIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGNVGDMLVSKIANKITDLPLGAR 120
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-I 185
+GTSS+RR+ LLR R D++++ FRG ++TR NK+ NN+ A +LA AG++RL +
Sbjct: 121 VGTSSVRRRIQLLRLRPDLNIVLFRGNVDTRWNKIFNNEVDATVLAAAGLQRLNYDTSRF 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
I++ ++ P+ GQG I IE ++ L INH+ TW + ER +L L+ C
Sbjct: 181 CNIISQDEMLPAIGQGVIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADCN 240
Query: 246 SAIAGFAYCKGST 258
I G A G+
Sbjct: 241 VPIGGLANYIGNN 253
>gi|162218053|ref|YP_621689.2| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054]
Length = 334
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 161/288 (55%), Gaps = 5/288 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +
Sbjct: 77 KELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGA 136
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I
Sbjct: 137 VVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 196
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 197 RALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 256
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290
+A A + LY G V +DGK G DA+ +GR
Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 304
>gi|325141763|gb|EGC64215.1| porphobilinogen deaminase [Neisseria meningitidis 961-5945]
gi|325197751|gb|ADY93207.1| porphobilinogen deaminase [Neisseria meningitidis G2136]
Length = 311
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294
>gi|188585750|ref|YP_001917295.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|229836110|sp|B2A1G7|HEM3_NATTJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|179350437|gb|ACB84707.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 311
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 154/267 (57%), Gaps = 3/267 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL L + P I I + TKGD++ N +L+++GGKGLF
Sbjct: 3 LRIGTRRSQLALDQTNWVVEQLKTHY--PDIEIEIKKIETKGDQLLNVSLSKVGGKGLFL 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+ L+ GEID AVHS KD+PT+ + L+I A R D D IS+ ++ +L ++
Sbjct: 61 KEIQNALLQGEIDLAVHSMKDIPTETTEDLEICAITKRVDPLDALISNNDITIDELPENA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKV 184
IGTSSLRR + L +R+D+ +I RG I TR+NKL + A++LA AG+ R
Sbjct: 121 KIGTSSLRRGSQLKAYRNDLQIIPIRGNINTRMNKLQELPELDAVVLAKAGLVRSGMTDS 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ E P PGQGA+ +E +N +E + V++ ++ ++ ERAFL L GSC
Sbjct: 181 ISQNISPEIIVPCPGQGALGLEIRHDNENLKEKLAVLDDSESRKAIGAERAFLNRLGGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK 271
+ +A + L+ G+V + DG+
Sbjct: 241 HVPVGAYAEIISNELHLTGVVASEDGQ 267
>gi|218899632|ref|YP_002448043.1| porphobilinogen deaminase [Bacillus cereus G9842]
gi|228967567|ref|ZP_04128593.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|226740628|sp|B7IIX5|HEM3_BACC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218545857|gb|ACK98251.1| porphobilinogen deaminase [Bacillus cereus G9842]
gi|228792146|gb|EEM39722.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 309
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 161/285 (56%), Gaps = 8/285 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ IAG+A K T+ +V + DG + + + G + + +
Sbjct: 242 QVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGTNPEEVGL 286
>gi|88607872|ref|YP_505325.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ]
gi|88598935|gb|ABD44405.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ]
Length = 304
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 156/272 (57%), Gaps = 4/272 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A ++++ + + II + T GD T+ L +IGGKGLF
Sbjct: 7 IRIGTRGSLLAMQQARIVKTAIETNY--AELSTRIITIKTSGDMNTHVPLYDIGGKGLFI 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHSAKD+P + L I LPR D F+S S+ L L++
Sbjct: 65 KEIEEALLDNIIDVAVHSAKDVPGIYSEDLDIPCILPRASALDAFLSSKYDSIASLPLNA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RRK LL R D+ +I RG +ETR++K+ + I+LA AG+ R+ K+ +I
Sbjct: 125 KIGTSSVRRKVQLLTMRPDLEIIPMRGNVETRISKMQMGECDGIVLAEAGLYRVSKDNLI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L E + GQGAIC++ + + E++K +N ++ +V+ ER+F+ +DGSC
Sbjct: 185 SEVLQPEVMLGAVGQGAICVQCRRYDRRILEILKKLNCHKSYTTVSAERSFMRAVDGSCN 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK--IFHE 275
+ +A A + +LA D + +F E
Sbjct: 245 TPLAAMAKYIDMDILTMKCMLADDARNMVFTE 276
>gi|52141043|ref|YP_085787.1| porphobilinogen deaminase [Bacillus cereus E33L]
gi|61213349|sp|Q633Y0|HEM3_BACCZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51974512|gb|AAU16062.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus
cereus E33L]
Length = 309
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292
>gi|317123819|ref|YP_004097931.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043]
gi|315587907|gb|ADU47204.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043]
Length = 316
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 154/295 (52%), Gaps = 9/295 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + + D + H++ ++ ++T+GD ++ LT IGG G+F
Sbjct: 4 LRLGTRRSALATTQS----GWVADQLRAAGHDVELVEITTEGD-VSGGLLTAIGGTGVFA 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I K L G +D AVHS KD+PT GL ++A RED RDV ++ +L +L + S
Sbjct: 59 AAIRKALTDGRVDVAVHSLKDLPTAPEPGLVVAAVPAREDSRDVLVARDGLTLGELPIGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT S RR A L + + RG ++TRL +++ + A++LA AG+ RL + V+
Sbjct: 119 VVGTGSPRRTAQLAALGLGLEIRPIRGNVDTRLRLVSSGEVDAVILARAGLARLGRLDVV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ P+PGQGA+ +E + P E V V+ DT S+ ERA LA L+ C
Sbjct: 179 TEVLDPIQVLPAPGQGALAVECRADRPDVLEAVSVLEDADTRASITAERALLAALEAGCT 238
Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A +G L DG+I S G D ++GR AQ +
Sbjct: 239 APVGALAEVVDGEEGLELSLRAFAGTEDGRIDLRRSLTGRYDDPESLGRRLAQIL 293
>gi|325135871|gb|EGC58483.1| porphobilinogen deaminase [Neisseria meningitidis M0579]
gi|325207582|gb|ADZ03034.1| porphobilinogen deaminase [Neisseria meningitidis NZ-05/33]
Length = 311
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKL 294
>gi|307154737|ref|YP_003890121.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822]
gi|306984965|gb|ADN16846.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822]
Length = 320
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 161/297 (54%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL
Sbjct: 8 RTVRIGSRKSQLALVQTYWVQGELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E +I +ID AVHS KD+PT L GL + R D D + H + L
Sbjct: 66 FTKELEVGMIDHQIDLAVHSLKDLPTNLPSGLILGCVTERVDPADGLVVNEKHKDKQLDT 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG+ RL
Sbjct: 126 LPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLTRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +I+ E + GQGA+ IE ++ + +L+KV+ H+ T D ERAFL EL
Sbjct: 186 MSDRIHQIIPSEISLHAVGQGALGIECRADDVEVLDLLKVLEHQATRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I +G TL G+V + DG+ + S G DA +G++ A +R
Sbjct: 246 EGGCQVPIGVNTSVEGDTLTLTGMVASLDGQKLIKDSITGKASDADQLGQELAIRMR 302
>gi|120610679|ref|YP_970357.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1]
gi|120589143|gb|ABM32583.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1]
Length = 318
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 146/260 (56%), Gaps = 5/260 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L + H + ++ ++T+GDRI +RTL+++GGKGLF
Sbjct: 17 PIVIATRESRLALWQAEHVQALL----RARGHAVELLGMTTQGDRILDRTLSKVGGKGLF 72
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL
Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 133 AVVGTSSLRRQVLLQALRPDLVIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLEGR 192
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC
Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252
Query: 245 KSAIAGFA-YCKGSTLYFYG 263
+A + TL G
Sbjct: 253 SVPLAAHGRWTDAGTLRLDG 272
>gi|116690445|ref|YP_836068.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424]
gi|105893551|gb|ABF76716.1| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054]
gi|116648534|gb|ABK09175.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424]
Length = 403
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 161/286 (56%), Gaps = 5/286 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 90 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 147
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 148 LEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGAVV 207
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I+
Sbjct: 208 GTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRA 267
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 268 LLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSCEVP 327
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290
+A A + LY G V +DGK G DA+ +GR
Sbjct: 328 LAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 373
>gi|304436298|ref|ZP_07396276.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370703|gb|EFM24350.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 311
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 144/252 (57%), Gaps = 2/252 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A ++ H P + + L+TKGDRI + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQANYVAEAIKKEH--PSCCVELRELTTKGDRILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ ++ +D AVHS KDMPT++ GL I A R D D F+S +++D
Sbjct: 59 KGLFTKELEQAMLDDAVDLAVHSLKDMPTEIPDGLVIGAITTRLDPGDAFVSAHYAAVED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GTSSLRR+A LL R D+++ D RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPVGARVGTSSLRRRAQLLAVRPDLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ IL P+ GQGA+ IE + ++ + + ERAFL +
Sbjct: 179 FERRIRTILPRSVMLPAVGQGALAIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRV 238
Query: 241 DGSCKSAIAGFA 252
+G C+ + +A
Sbjct: 239 EGGCQIPVGVYA 250
>gi|66773161|ref|NP_001019559.1| hydroxymethylbilane synthase, b [Danio rerio]
gi|63101908|gb|AAH95373.1| Hydroxymethylbilane synthase, b [Danio rerio]
Length = 360
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 150/270 (55%), Gaps = 8/270 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LA +T S + + ++ P + I+ +ST GD+I + L++IG K LF
Sbjct: 18 IRVGTRKSQLA---RIQTDSVVEKLKELYPDVLFEIVAMSTTGDKILDTALSKIGEKSLF 74
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L L
Sbjct: 75 TKELENALEKNEVDLVVHSLKDLPTVLPAGFTIGAVLKRENPHDAVVLHPKNKGKRLDSL 134
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRLK 180
+ SVIGTSSLRR A L + + D RG + TRL KL+ NN AI+LA AG+KR+
Sbjct: 135 SNKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDENNDFSAIILAAAGLKRMG 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +IL ED + GQGA+ +E + E+V V+N DT S ERAFL L
Sbjct: 195 WENRISQILGPEDCMYAVGQGALAVEVRARDLDILEMVSVLNDSDTALSCIAERAFLKHL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C +A + K S LY G V + DG
Sbjct: 255 EGGCSVPVAVHSEVKNSQLYLTGAVYSLDG 284
>gi|268679946|ref|YP_003304377.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946]
gi|268617977|gb|ACZ12342.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946]
Length = 314
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 161/296 (54%), Gaps = 7/296 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIP-LSTKGDRITNRTLTEIGGKG 62
K I TR S LAL + ++ L H PH V + + TKGD+I + L +IGGKG
Sbjct: 2 KKLIIATRGSKLALWQSEHVKAELEKAH---PHLAVELSIMMTKGDKILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ GE AVHS KD+P + +GL++ RED+RD +S L+DL
Sbjct: 59 LFTKELEEAMLRGEAHIAVHSLKDVPMEFPEGLKLGVITKREDVRDAMLSEKYGCLEDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT+SLRR+ LL+ R D + + RG + TR+ KL + AI+LA AGIKRL +
Sbjct: 119 QGAVVGTTSLRRRMQLLKLRPDFVIKNLRGNVNTRIRKLKEGEFDAIILASAGIKRLGLQ 178
Query: 183 KVIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ I E P+ GQ A+ IE V+N + + LV V+ ED ER F+ L
Sbjct: 179 EEVRYFTPISKEVMIPASGQAALGIEI-VDNAEVERLVSVLKDEDAMIETRVERDFVTLL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C+ I A +L+ I+ DG +G R + +G+ AQ +
Sbjct: 238 EGGCQVPIGVNAEVTQESLHVKAILGLPDGSQMMCEVMSGKREEFETLGKVLAQKV 293
>gi|206560969|ref|YP_002231734.1| porphobilinogen deaminase [Burkholderia cenocepacia J2315]
gi|238058732|sp|B4E8C4|HEM3_BURCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|198037011|emb|CAR52932.1| putative porphobilinogen deaminase protein [Burkholderia
cenocepacia J2315]
Length = 334
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 164/295 (55%), Gaps = 6/295 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 79 LEAALADGRADLAVHSLKDVPMALPDGFALAAIMEREDPRDAFVSNDYASLDALPAGAVV 138
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I+
Sbjct: 139 GTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRA 198
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 199 LLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVP 258
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+A A + LY G V +DGK C A+ DA R +S++
Sbjct: 259 LAAHAVWRAGELYLTGRVSTTDGKRVL----TAEECGAVMTVADALALGRAVSDE 309
>gi|238061239|ref|ZP_04605948.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149]
gi|237883050|gb|EEP71878.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149]
Length = 322
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 11/308 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + ++L + ++ + T GDR ++ + +G G+F
Sbjct: 4 PLRLGTRGSALAIAQSGQVAAALTAATG---REVELVEVVTAGDR-SSAPVHRLG-VGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L++ ID AVHS KD+PT GL I+A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALVARTIDLAVHSYKDLPTAAASGLHIAAVPPRQDPRDALVAKGGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKE 182
+V+GT +LRR A L + V RG ++TRL ++ A A++LA AG+ RL +
Sbjct: 119 AVVGTGALRRIAQLHALGLQLEVTPIRGNVDTRLARVLGPDADLDAVVLARAGLARLGRT 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+P QGA+ +E ++P EL+ V++H + +V ERA LA L+
Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDPDLVELLAVLDHAPSRAAVTAERALLATLEA 238
Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + +A +A G +Y G V++SDG +SR G DA IG+ A +
Sbjct: 239 GCSAPVAAYAELAEGDVGDEIYLRGAVISSDGTRDLRLSRTGTPADAAEIGKALAAELLE 298
Query: 299 ISNKNVFN 306
+ ++
Sbjct: 299 LGADSILG 306
>gi|228475193|ref|ZP_04059919.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119]
gi|228270804|gb|EEK12206.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119]
Length = 310
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 170/292 (58%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSKQFIDKLKAID--PSLEIEIKEIVTKGDRIVNQQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L +S++
Sbjct: 64 IQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPKNSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + V+
Sbjct: 124 GTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +DGSC+
Sbjct: 184 TYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLASMDGSCQV 243
Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I G+A + + F G+++ DGK +E + G D + +G ++ ++
Sbjct: 244 PIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVG--TDPVKLGNRVSEILK 293
>gi|89098939|ref|ZP_01171819.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911]
gi|89086343|gb|EAR65464.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911]
Length = 311
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 159/291 (54%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL L + + + TKGD+I + TL+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWVMDQLKKIDD--SFEFEVKEIVTKGDQILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ ++ EID AVHS KDMP L +GL I + RED RD IS Q+L L +V+
Sbjct: 64 IEQAMLDEEIDMAVHSMKDMPAVLPEGLVIGSIPEREDHRDALISKGHQTLDQLKPGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+ +
Sbjct: 124 GTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLETEEYDAIILAAAGLSRMGWTTDTVS 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L E P+ GQGA+ IE ++ + EL+ T +V ERAFL +++G C+
Sbjct: 184 EFLEPEVCLPAVGQGALSIECRESDKELLELLSKFTCGTTNQTVRAERAFLHKMEGGCQV 243
Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG+A + + G+V + DGK ++ G D + +G A+ +
Sbjct: 244 PIAGYAVLNEKDEIELTGLVASPDGKTIYKEKVTG--ADPVEVGLRTAEKL 292
>gi|228923217|ref|ZP_04086507.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836423|gb|EEM81774.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 309
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 160/285 (56%), Gaps = 8/285 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ IAG+A K + +V + DG + + + G + + +
Sbjct: 242 QVPIAGYATLTKNDAIELTALVGSMDGSVLLKETVVGTNPEEVGL 286
>gi|15604330|ref|NP_220846.1| porphobilinogen deaminase [Rickettsia prowazekii str. Madrid E]
gi|11386862|sp|Q9ZD77|HEM3_RICPR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3861022|emb|CAA14922.1| PORPHOBILINOGEN DEAMINASE (hemC) [Rickettsia prowazekii]
gi|292572083|gb|ADE29998.1| Porphobilinogen deaminase [Rickettsia prowazekii Rp22]
Length = 299
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 149/249 (59%), Gaps = 5/249 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL +T + + +I P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRNSTLAL---IQTNLVIEQIKQIFPDINCEIVPIITSGDLIQNKPLYDIGGKALF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L+ +ID AVHS KD+P K+ L I+A L RED RDV + QS++ L +
Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDIPGKIPVELVIAAVLEREDPRDVLVCLNYQSIETLPQN 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183
+VIG+S++RRKA + + R D+++ FRG +++R+ KL + AI+L+YAG+KRL +
Sbjct: 122 AVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDAIILSYAGLKRLNVFNQ 181
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ P GQG I +E ++ + INH T++ + ERAFL LD +
Sbjct: 182 KYCHLIEYSKMLPCIGQGVIAVEIRKDDNAMFNICSQINHLPTFELIKPERAFLEYLDAN 241
Query: 244 CKSAIAGFA 252
C + IA +A
Sbjct: 242 CSTPIAAYA 250
>gi|154174368|ref|YP_001408386.1| porphobilinogen deaminase [Campylobacter curvus 525.92]
gi|259647805|sp|A7GYU4|HEM3_CAMC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112802609|gb|EAT99953.1| porphobilinogen deaminase [Campylobacter curvus 525.92]
Length = 311
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 147/269 (54%), Gaps = 5/269 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR S LAL + ++ LM H + ++ + TKGD I + L +IGGKGL
Sbjct: 2 KILKIATRKSALALWQSEHIKARLMAQH--AGLQVELVGMKTKGDVILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++SG+ AVHS KD+P L GL ++A RED+RD IS DL
Sbjct: 60 FTKELEDSMLSGQTHIAVHSLKDVPVAFLDGLVLAAICSREDVRDAMISQRYVKFDDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRRK LLR R D+++I RG ++TRL KL + AI+LA AGI RL
Sbjct: 120 SAKVGTTSLRRKMQLLRMRPDLNIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNLAD 179
Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I +I P+ GQGA+ +E V++ + E +K +N E + ER F+ L+
Sbjct: 180 EVAHIYPFDIAQMTPAMGQGALGVEA-VDDAQILEKIKFLNDERSVIETRVERDFVTLLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I A + IV DG
Sbjct: 239 GGCQVPIGINARLASEEIEINAIVGLPDG 267
>gi|118479630|ref|YP_896781.1| porphobilinogen deaminase [Bacillus thuringiensis str. Al Hakam]
gi|196039380|ref|ZP_03106686.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99]
gi|196044836|ref|ZP_03112070.1| porphobilinogen deaminase [Bacillus cereus 03BB108]
gi|225866445|ref|YP_002751823.1| porphobilinogen deaminase [Bacillus cereus 03BB102]
gi|229186706|ref|ZP_04313864.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1]
gi|158512516|sp|A0RJ81|HEM3_BACAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800233|sp|C1ETR0|HEM3_BACC3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118418855|gb|ABK87274.1| hydroxymethylbilane synthase [Bacillus thuringiensis str. Al Hakam]
gi|196024324|gb|EDX62997.1| porphobilinogen deaminase [Bacillus cereus 03BB108]
gi|196030007|gb|EDX68608.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99]
gi|225787726|gb|ACO27943.1| hydroxymethylbilane synthase [Bacillus cereus 03BB102]
gi|228596719|gb|EEK54381.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1]
Length = 309
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292
>gi|75759963|ref|ZP_00740032.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228902993|ref|ZP_04067133.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222]
gi|74492560|gb|EAO55707.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228856669|gb|EEN01189.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222]
Length = 309
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 160/285 (56%), Gaps = 8/285 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHRLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ IAG+A K T+ +V + DG + + + G + + +
Sbjct: 242 QVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGTNPEEVGL 286
>gi|118444575|ref|YP_878763.1| porphobilinogen deaminase [Clostridium novyi NT]
gi|189028087|sp|A0Q2B1|HEM3_CLONN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118135031|gb|ABK62075.1| porphobilinogen deaminase [Clostridium novyi NT]
Length = 300
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 161/293 (54%), Gaps = 6/293 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + K P + +STKGDRI + L +IG KGLF +E
Sbjct: 5 VGSRGSKLALTQTNWVIDKIK--QKYPQIQFEVKIISTKGDRIQHIALDKIGDKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHSV 126
IE++LISG+ID AVHS KDM T++ + L+ S RED RDV I + S+ +L +++
Sbjct: 63 IEEQLISGDIDMAVHSMKDMSTEMPEELKFSYVPKREDYRDVLILNKKYNSIDELPMNAK 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185
IGT S RRK LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL +EK+
Sbjct: 123 IGTGSKRRKYQLLQYRDDLNIVPIRGNVETRINKIEMENLHGVVLASAGIKRLNIQEKLD 182
Query: 186 KEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I LN + PSP QG + +E + +E++K I +++ ERAFL ++G
Sbjct: 183 YNIFYLNEDIMLPSPAQGILALEIRKDREDLEEILKSIEDKNSSIQAVAERAFLKGVNGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C I + G++ DG S G DA IG + A+ +
Sbjct: 243 CHVPIGAICNINKDNVELTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIV 295
>gi|229093561|ref|ZP_04224662.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42]
gi|228689770|gb|EEL43576.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42]
Length = 309
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG I + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRL 292
>gi|187778036|ref|ZP_02994509.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC
15579]
gi|187774964|gb|EDU38766.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC
15579]
Length = 295
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 156/284 (54%), Gaps = 4/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA SL H I ++I T GD+I +L +IGGKGLF
Sbjct: 8 FVIATRRSKLAQVQTEIIIDSLNKKHDIECEKLLI---ETIGDKILEVSLDKIGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 65 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 125 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 185 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
S I +A K + ++ GI + I E++ ++ + + I
Sbjct: 244 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 287
>gi|284161707|ref|YP_003400330.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631]
gi|284011704|gb|ADB57657.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631]
Length = 292
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 161/293 (54%), Gaps = 17/293 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LALA S +++ K +++ I + + GD + ++ L E G G F
Sbjct: 7 VGTRGSKLALAQT----SKVVERLKEEGYSVEIRIIKSTGDIMKDKPLYEFKGSGAFVRA 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ GEID AVHS KD+P+ +L+G+ +SA L R+ D FI+ +SL+++ ++VI
Sbjct: 63 LEHALVRGEIDVAVHSYKDIPSNMLEGVTVSAVLERDSPYDAFIARNGESLEEIKPNAVI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L +RSD+ + RG ++TRL KL AI+LA AGI+RL V +
Sbjct: 123 GTSSLRRRAQLKLYRSDLRFENLRGNVDTRLRKLREGLYDAIVLAEAGIQRLGL-NVKYQ 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L IE F P QG I ++T V ++LVK +NHE+TW ER + L C
Sbjct: 182 RLPIERFVPPANQGIIAVQTRVGE---EDLVKFMNHEETWIEAEVERIVMKTLGVGCAIP 238
Query: 248 IAGFAYCKGSTLYFYGIVLASDG---KIFHEVSRNGNRCDAINIGRDAAQYIR 297
+A C+G ++ DG K+ E+SR AI R+ A+ R
Sbjct: 239 AGIYAECRGKVRLIVQVI--RDGREFKVIEELSRE----SAIEEAREIAENFR 285
>gi|161527999|ref|YP_001581825.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1]
gi|238054422|sp|A9A1A1|HEM3_NITMS RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|160339300|gb|ABX12387.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1]
Length = 311
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 158/292 (54%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ +G R S L++A + L H P I ++TKGD +R L I KG+F
Sbjct: 3 YIVGARGSQLSVAQTNLVIAELKKAH--PDTEYEIKTITTKGD-TDSRPLFTIDQKGIFE 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ + E+D AVHS KD+P++L L ++ RE + DVFIS +L + S
Sbjct: 60 KEIDRAVAQKEVDFAVHSLKDVPSELDDNLVLACIPKRETVNDVFISPDGSTLDSIKPGS 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR + R R D++V RG IETR+ K + AI+LA AGI RL +
Sbjct: 120 VIGTSSLRRAVQVSRKRPDVTVKPIRGNIETRIKKASGENYDAIVLAKAGISRLGVDVKY 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ +DF PSPGQGAI I ++ K E++K I D+ + ERA +D C+
Sbjct: 180 TE-LSTDDFSPSPGQGAIAIVARADDSKTIEMLKKIEDPDSRLEIEAERALSDFVDSGCR 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ +A GS + + DGK F VS+ G++ + ++G+ A + +R
Sbjct: 239 FPVGAYAKSNGSEMTLTVTAFSVDGKQFLHVSKTGDKNNPKSLGQSAGEELR 290
>gi|218905666|ref|YP_002453500.1| porphobilinogen deaminase [Bacillus cereus AH820]
gi|228917102|ref|ZP_04080660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929511|ref|ZP_04092530.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935783|ref|ZP_04098595.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229124004|ref|ZP_04253196.1| Porphobilinogen deaminase [Bacillus cereus 95/8201]
gi|254724608|ref|ZP_05186391.1| porphobilinogen deaminase [Bacillus anthracis str. A1055]
gi|226740627|sp|B7JQ57|HEM3_BACC0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218537761|gb|ACK90159.1| porphobilinogen deaminase [Bacillus cereus AH820]
gi|228659306|gb|EEL14954.1| Porphobilinogen deaminase [Bacillus cereus 95/8201]
gi|228823840|gb|EEM69660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830090|gb|EEM75708.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842520|gb|EEM87610.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 309
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292
>gi|206969979|ref|ZP_03230933.1| porphobilinogen deaminase [Bacillus cereus AH1134]
gi|229192675|ref|ZP_04319634.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876]
gi|206735667|gb|EDZ52835.1| porphobilinogen deaminase [Bacillus cereus AH1134]
gi|228590765|gb|EEK48625.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876]
Length = 309
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 164/293 (55%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEEVGLEAADRL 292
>gi|332764355|gb|EGJ94590.1| porphobilinogen deaminase [Shigella flexneri 2930-71]
Length = 273
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 142/254 (55%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TRL+KL+
Sbjct: 61 REDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ +N
Sbjct: 121 NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H +T V ERA L+G C+ I +A ++ +V A DG R G
Sbjct: 181 HHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAP 240
Query: 283 CDAINIGRDAAQYI 296
DA +G A+ +
Sbjct: 241 QDAEQMGISLAEEL 254
>gi|312137417|ref|YP_004004754.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088]
gi|311225136|gb|ADP77992.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088]
Length = 289
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 162/287 (56%), Gaps = 6/287 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR SPLAL + + L K+ + I + T GD+I + L +IG +G+FT+E
Sbjct: 3 VGTRGSPLALKQTYYVVNQL---SKLVNEEVKIKIIKTTGDKIKDSQLHKIGQRGVFTKE 59
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+K +++ E+D AVHS KD+PT+L + L+I A R+ +V +S S +L+ ++
Sbjct: 60 IDKAVLNEEVDLAVHSLKDVPTELHEDLEIVAIPHRDSPNEVLVSK--YSWDELSEECIL 117
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRRKA + RG IETR+ K+ + + A ++A A +KRL EK IK+
Sbjct: 118 GTSSLRRKAFCRYHGKKFKIKPLRGNIETRIKKVEDGEYDATIMAEAALKRLNLEKYIKK 177
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+++ F PS GQGAI IET ++ K ++K +N + V ER L EL C+
Sbjct: 178 RFSVKYFTPSAGQGAIAIETR-SDSKYISVLKKLNDHRAFYEVTAERTVLKELGVGCQWP 236
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
I A KG L Y I+L+ GK+ ++ +G +A +G+ AA+
Sbjct: 237 IGVVARSKGKNLNLYAILLSKKGKLLSKIELDGKLHEATKLGKKAAK 283
>gi|229032118|ref|ZP_04188096.1| Porphobilinogen deaminase [Bacillus cereus AH1271]
gi|228729208|gb|EEL80206.1| Porphobilinogen deaminase [Bacillus cereus AH1271]
Length = 309
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 161/285 (56%), Gaps = 8/285 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ IAG+A + + +V + DG + + + G + + +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGTNSEEVGL 286
>gi|168182770|ref|ZP_02617434.1| hydroxymethylbilane synthase [Clostridium botulinum Bf]
gi|237794217|ref|YP_002861769.1| porphobilinogen deaminase [Clostridium botulinum Ba4 str. 657]
gi|259647792|sp|C3L2Z3|HEM3_CLOB6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|182673912|gb|EDT85873.1| hydroxymethylbilane synthase [Clostridium botulinum Bf]
gi|229263906|gb|ACQ54939.1| hydroxymethylbilane synthase [Clostridium botulinum Ba4 str. 657]
Length = 290
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 156/284 (54%), Gaps = 4/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H I ++I T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L RSD+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRSDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
S I +A K + ++ GI + I E++ ++ + + I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 282
>gi|261393090|emb|CAX50687.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS;
pre-uroporphyrinogen synthase) [Neisseria meningitidis
8013]
Length = 311
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294
>gi|304388235|ref|ZP_07370355.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091]
gi|304337762|gb|EFM03911.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091]
Length = 311
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294
>gi|254414246|ref|ZP_05028013.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420]
gi|196178921|gb|EDX73918.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420]
Length = 321
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 164/307 (53%), Gaps = 7/307 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L HK P + + +ST GD+I + L++IG KG
Sbjct: 10 RTIRIGSRKSQLALVQTYWVQEQL---HKHYPDRDFEVQTMSTHGDKILDVALSKIGDKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E +++ EID AVHS KD+PT L +GL + RE+ D + H + L
Sbjct: 67 LFTKELEVGMLNQEIDLAVHSLKDLPTALPEGLVLGCVTERENPADALVLHAKHQGKQLD 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG+KRL
Sbjct: 127 TLPEGAVIGTSSLRRLAQLRYHFPHFTFKDIRGNLNTRLGKLDAGEFDALILAAAGLKRL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +++ E + GQGA+ IE ++P+ +++K I H T ERAFL E
Sbjct: 187 DMSDRIHQVIPSEISLHAVGQGALGIECRGDDPEILDVLKAIEHSPTAQRCYAERAFLRE 246
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I KG+ L G+V DG + + G +A +G + AQ +R
Sbjct: 247 LEGGCQVPIGVNTEIKGNNLILTGMVARLDGTSLIKDTVTGEATEAEALGVELAQLLRQQ 306
Query: 300 SNKNVFN 306
+ + +
Sbjct: 307 GAQEILD 313
>gi|314936225|ref|ZP_07843572.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis
C80]
gi|313654844|gb|EFS18589.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis
C80]
Length = 310
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 170/292 (58%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSKQFIDKLKAID--PSLEIEIKEIVTKGDRIVNQQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L +S++
Sbjct: 64 IQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPKNSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + V+
Sbjct: 124 GTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +DGSC+
Sbjct: 184 TYLDKDTLLPAIGQGALGIECRRNDIELLELLQKVHNNEVANCVTAERTFLAAMDGSCQV 243
Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I G+A + + F G+++ DGK +E + G D + +G ++ ++
Sbjct: 244 PIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVG--TDPVKLGNRVSEILK 293
>gi|229111935|ref|ZP_04241479.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15]
gi|228671499|gb|EEL26799.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15]
Length = 309
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 165/290 (56%), Gaps = 10/290 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEEYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ IAG+A + + +V + DG + + + G + +G +AA
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGTNPE--EVGLEAA 289
>gi|167636181|ref|ZP_02394485.1| porphobilinogen deaminase [Bacillus anthracis str. A0442]
gi|170688695|ref|ZP_02879900.1| porphobilinogen deaminase [Bacillus anthracis str. A0465]
gi|254687046|ref|ZP_05150904.1| porphobilinogen deaminase [Bacillus anthracis str. CNEVA-9066]
gi|254741606|ref|ZP_05199293.1| porphobilinogen deaminase [Bacillus anthracis str. Kruger B]
gi|167528402|gb|EDR91170.1| porphobilinogen deaminase [Bacillus anthracis str. A0442]
gi|170667381|gb|EDT18139.1| porphobilinogen deaminase [Bacillus anthracis str. A0465]
Length = 309
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 164/290 (56%), Gaps = 10/290 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ IAG+A + + +V + DG + + + G D +G +AA
Sbjct: 242 QVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAA 289
>gi|30264532|ref|NP_846909.1| porphobilinogen deaminase [Bacillus anthracis str. Ames]
gi|47529995|ref|YP_021344.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187356|ref|YP_030608.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne]
gi|65321833|ref|ZP_00394792.1| COG0181: Porphobilinogen deaminase [Bacillus anthracis str. A2012]
gi|165871949|ref|ZP_02216590.1| porphobilinogen deaminase [Bacillus anthracis str. A0488]
gi|167640713|ref|ZP_02398973.1| porphobilinogen deaminase [Bacillus anthracis str. A0193]
gi|170708352|ref|ZP_02898796.1| porphobilinogen deaminase [Bacillus anthracis str. A0389]
gi|177653999|ref|ZP_02936040.1| porphobilinogen deaminase [Bacillus anthracis str. A0174]
gi|190566915|ref|ZP_03019831.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I]
gi|227817244|ref|YP_002817253.1| porphobilinogen deaminase [Bacillus anthracis str. CDC 684]
gi|229601857|ref|YP_002868748.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248]
gi|254736568|ref|ZP_05194274.1| porphobilinogen deaminase [Bacillus anthracis str. Western North
America USA6153]
gi|254754796|ref|ZP_05206831.1| porphobilinogen deaminase [Bacillus anthracis str. Vollum]
gi|254757628|ref|ZP_05209655.1| porphobilinogen deaminase [Bacillus anthracis str. Australia 94]
gi|39931467|sp|Q81LC7|HEM3_BACAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800231|sp|C3P9E9|HEM3_BACAA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800232|sp|C3L6Z5|HEM3_BACAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30259190|gb|AAP28395.1| hydroxymethylbilane synthase [Bacillus anthracis str. Ames]
gi|47505143|gb|AAT33819.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181283|gb|AAT56659.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne]
gi|164712239|gb|EDR17775.1| porphobilinogen deaminase [Bacillus anthracis str. A0488]
gi|167511285|gb|EDR86671.1| porphobilinogen deaminase [Bacillus anthracis str. A0193]
gi|170126727|gb|EDS95610.1| porphobilinogen deaminase [Bacillus anthracis str. A0389]
gi|172081054|gb|EDT66132.1| porphobilinogen deaminase [Bacillus anthracis str. A0174]
gi|190561906|gb|EDV15875.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I]
gi|227006938|gb|ACP16681.1| hydroxymethylbilane synthase [Bacillus anthracis str. CDC 684]
gi|229266265|gb|ACQ47902.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248]
Length = 309
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 164/290 (56%), Gaps = 10/290 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ IAG+A + + +V + DG + + + G D +G +AA
Sbjct: 242 QVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAA 289
>gi|229117967|ref|ZP_04247327.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3]
gi|228665416|gb|EEL20898.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3]
Length = 295
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 142/241 (58%), Gaps = 2/241 (0%)
Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94
P+ + + TKGD I + TL+++GGKGLF +EIE L+ EID AVHS KDMP L +G
Sbjct: 17 PYEFEVKEIVTKGDVILDVTLSKVGGKGLFVKEIEHALLMKEIDMAVHSMKDMPAVLPEG 76
Query: 95 LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154
L I R D RD FIS + S KDLA +++GTSSLRR A LL R D+ V RG I
Sbjct: 77 LMIGCTPKRVDPRDAFISKSGASFKDLAEGAILGTSSLRRSAQLLAARPDLQVKWIRGNI 136
Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+TRL KL AI+LA AG++R+ ++VI E L+ P+ GQGA+ IE ++
Sbjct: 137 DTRLRKLKEEDYDAIILATAGLQRMGWDDEVITEHLDETLCVPAVGQGALAIECRKDDND 196
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKI 272
+L+ +N T +V ER FL +L+G C+ IAG+A K + +V + DG +
Sbjct: 197 LLQLLSHMNDAVTERTVAAERVFLHKLEGGCQVPIAGYATLTKDDAIELTALVGSMDGSV 256
Query: 273 F 273
Sbjct: 257 L 257
>gi|325202672|gb|ADY98126.1| porphobilinogen deaminase [Neisseria meningitidis M01-240149]
Length = 311
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGVVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKL 294
>gi|124005986|ref|ZP_01690823.1| porphobilinogen deaminase [Microscilla marina ATCC 23134]
gi|123988393|gb|EAY28039.1| porphobilinogen deaminase [Microscilla marina ATCC 23134]
Length = 308
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 162/294 (55%), Gaps = 7/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + + D+ + ++ + TKGD+I N+ L++IG KG+FT
Sbjct: 3 IRIGTRGSKLALWQA----NYVADLLQKGGATTELVMVETKGDKILNKALSKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALH 124
EE+E+ L E+D AVHSAKD+ + L L++ A+ RE++ DV IS +T L
Sbjct: 59 EELEEHLRQKEVDIAVHSAKDVQSTLPDDLELIAFSEREEVHDVLISFNTDARLDTFNSS 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+IGTSS RR A L + I D RG ++TR+ KL A++LAYAG+ R+ K
Sbjct: 119 YIIGTSSTRRVAQLKHYYPKIRTADVRGNLQTRMKKLEKGNYDALILAYAGVHRMGFSKY 178
Query: 185 IKEILNIEDFPPSPGQGAICIET--HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L+ F P+ GQG + IE +NN K + + +N + T + ER+FL L+G
Sbjct: 179 IVEDLSPNKFIPAVGQGCVAIEAAKDLNNDKVAMIRQCVNDKKTEQCLRAERSFLKTLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + G A K + + G +++ +G+ + G D ++IG+ A+ I
Sbjct: 239 GCSIPVFGLARIKKNQIELKGGIISLNGQDLVKQQAKGVLDDGVSIGKQLAERI 292
>gi|301630638|ref|XP_002944423.1| PREDICTED: porphobilinogen deaminase-like [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 144/254 (56%), Gaps = 4/254 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L H + ++ L+T+GD+I +R+L++IGGKGLF +E
Sbjct: 47 IATRESRLALWQAAHVQALLAARG----HAVTLLGLTTQGDQILDRSLSKIGGKGLFVKE 102
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G ++ + RED RD F+S SL L +V+
Sbjct: 103 LELALEQGRADIAVHSLKDVPMELPAGFALACVMEREDARDAFVSPRYASLDALPQGAVV 162
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ LL R + + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 163 GTSSLRRQVLLQALRPGLRIEPLRGNLDTRLRKLDAGQYDAIVLAAAGLKRLGLGERIRS 222
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 223 VFAPAEILPAAGQGALGIEVRSDRQDLIDALAPLAHRPTWLTVAAERAVSRAMGGSCSMP 282
Query: 248 IAGFAYCKGSTLYF 261
+A +G+TL+
Sbjct: 283 LAAHGQWQGNTLHL 296
>gi|255657374|ref|ZP_05402783.1| porphobilinogen deaminase [Clostridium difficile QCD-23m63]
gi|296448968|ref|ZP_06890759.1| hydroxymethylbilane synthase [Clostridium difficile NAP08]
gi|296879793|ref|ZP_06903766.1| hydroxymethylbilane synthase [Clostridium difficile NAP07]
gi|296262194|gb|EFH08998.1| hydroxymethylbilane synthase [Clostridium difficile NAP08]
gi|296429082|gb|EFH14956.1| hydroxymethylbilane synthase [Clostridium difficile NAP07]
Length = 301
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 150/265 (56%), Gaps = 3/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL + L K P + I + TKGD I N +L +IG KGLF +E
Sbjct: 5 VGTRGSNLALIQTEWVINELK--KKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126
IE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL +V
Sbjct: 63 IEQQLLYGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPRGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + I
Sbjct: 123 IGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKIS 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L ++ P+P QGA+ IE N+ K + +V + E+T + ER FL ++GSC
Sbjct: 183 SYLPVDVVIPAPAQGALAIEIRSNDSKIEGIVNSLKDENTEIQILAERGFLDGVNGSCHI 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
+A + ++ G+ S+GK
Sbjct: 243 PMAAYCEIIQDKIHLTGLYGDSEGK 267
>gi|153939780|ref|YP_001390273.1| porphobilinogen deaminase [Clostridium botulinum F str. Langeland]
gi|166201504|sp|A7GBW3|HEM3_CLOBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152935676|gb|ABS41174.1| hydroxymethylbilane synthase [Clostridium botulinum F str.
Langeland]
gi|295318368|gb|ADF98745.1| hydroxymethylbilane synthase [Clostridium botulinum F str. 230613]
Length = 290
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 155/284 (54%), Gaps = 4/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H I ++I T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPKREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ E +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLEHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
S I +A K + ++ GI + I E++ ++ + + I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 282
>gi|282901179|ref|ZP_06309108.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505]
gi|281193879|gb|EFA68847.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505]
Length = 322
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 160/295 (54%), Gaps = 5/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KGLFT
Sbjct: 11 IRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKGLFT 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + +H Q+L L
Sbjct: 69 KELELGMINQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVFHQNHLGQTLATLP 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 129 PGSVIGTSSLRRLAQLRHKFPHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLNMH 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + + GQGA+ IE N+ + ++K I H T D ER+FL L+G
Sbjct: 189 HRIHEILPPDISLHAVGQGALGIECRENDLELITILKAIEHPQTRDRCLAERSFLRSLEG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ I G TL GIV + +G+ + + G DA +G A +R
Sbjct: 249 GCQVPIGVNTEIDGETLTLTGIVASVNGENLVKNTITGAATDAEKLGTQLANILR 303
>gi|212638453|ref|YP_002314973.1| porphobilinogen deaminase [Anoxybacillus flavithermus WK1]
gi|212559933|gb|ACJ32988.1| Porphobilinogen deaminase (hydroxymethylbilane synthase)
[Anoxybacillus flavithermus WK1]
Length = 313
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 162/301 (53%), Gaps = 10/301 (3%)
Query: 1 MEKKPFR---IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
ME+ R +G+R S LAL L + P + + TKGD+I + TL++
Sbjct: 1 MEESMMRKIIVGSRRSKLALTQTNWVIEQLKQLGA--PFEFEVKEIVTKGDQILHVTLSK 58
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
+GGKGLF +EIE+ ++ GEID AVHS KDMP L GL I RED RDV IS
Sbjct: 59 VGGKGLFVKEIEQAMLDGEIDFAVHSMKDMPAVLPDGLVIGCVPKREDHRDVLISKGHIP 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ L +++GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+
Sbjct: 119 FEQLPSGAIVGTSSLRRSAQLLAVRPDLQIQWIRGNIDTRLAKLQTDAYDAIILAAAGLH 178
Query: 178 RLKKEK-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ K VI + L + P+ GQGA+ IE N+ + + + + T + ERAF
Sbjct: 179 RMGWAKEVITQYLPTDICVPAVGQGALAIECRENDAELLHWLNKLTDKQTERATRAERAF 238
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQY 295
L ++G C+ +AG+AY + +V +G ++ EV + + +G +AA+
Sbjct: 239 LQHIEGGCQVPVAGYAYVDEDAIVLTALVATPNGTEVLKEVVKG---TEPEKVGTEAAKR 295
Query: 296 I 296
+
Sbjct: 296 L 296
>gi|119503707|ref|ZP_01625789.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080]
gi|119460215|gb|EAW41308.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080]
Length = 302
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 159/289 (55%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLAL A L ++ P + ++ ++++GD++ ++ L ++GGKGLF +E
Sbjct: 6 IATRESPLALWQANYVADRLRALY--PELMVELLGMTSRGDQLLDKPLYKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P L GL + RED RD + +A L +L +
Sbjct: 64 LETALLDGRADIAVHSMKDVPMALPPGLTLGVICEREDPRDALVGISA--LSELEQGARF 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR + R R D+ + RG + TRL KL+ + AI+LA AG+ RL E I
Sbjct: 122 GTSSLRRACQIRRVRPDLEIGFLRGNVNTRLAKLDAGEFDAIILATAGLVRLGFESRIGA 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ E P+ GQGA+ IE ++ + EL+ +N DT + V ERA + LDG C
Sbjct: 182 RIEPEVSLPAGGQGAVGIEYRSDDDRVAELLAPLNDADTAECVTAERAVVRVLDGGCDVP 241
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IA +A +G+ L+ +V + DG+ E G +A +G++ AQ +
Sbjct: 242 IASYAVKEGNELWLRALVGSVDGRSVLEAQSRG--ANAEELGQEVAQAL 288
>gi|47566654|ref|ZP_00237476.1| porphobilinogen deaminase [Bacillus cereus G9241]
gi|228960740|ref|ZP_04122379.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228987716|ref|ZP_04147827.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229158082|ref|ZP_04286152.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342]
gi|47556684|gb|EAL15016.1| porphobilinogen deaminase [Bacillus cereus G9241]
gi|228625401|gb|EEK82158.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342]
gi|228771990|gb|EEM20445.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228798956|gb|EEM45931.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 309
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 165/293 (56%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGITEKTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292
>gi|228941631|ref|ZP_04104178.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974560|ref|ZP_04135126.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981155|ref|ZP_04141455.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407]
gi|228778355|gb|EEM26622.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407]
gi|228784963|gb|EEM32976.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817843|gb|EEM63921.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942243|gb|AEA18139.1| porphobilinogen deaminase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 309
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 154/270 (57%), Gaps = 8/270 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDEALCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273
+ IAG+A + + +V + DG +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVL 271
>gi|282895464|ref|ZP_06303601.1| Porphobilinogen deaminase [Raphidiopsis brookii D9]
gi|281199497|gb|EFA74360.1| Porphobilinogen deaminase [Raphidiopsis brookii D9]
Length = 322
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 161/297 (54%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KGL
Sbjct: 9 RTIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E +I+ EID AVHS KD+PT L GL ++A RE+ D + +H Q+L
Sbjct: 67 FTKELELGMINQEIDFAVHSLKDLPTNLPAGLTLAAITARENPADAVVFHQNHLGQTLDT 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SVIGTSSLRR A L S + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 127 LPPGSVIGTSSLRRLAQLRHKFSHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLN 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL + + GQGA+ IE N+ + ++K I H T D ER+FL L
Sbjct: 187 MHHRIHQILPPDISLHAVGQGALGIECRENDSELITILKAIEHPQTRDRCLAERSFLRSL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I G +L GIV + +G+ + + G DA +G A +R
Sbjct: 247 EGGCQVPIGVNTEIDGESLTLTGIVASVNGENLVKNTITGAAADAEKLGTQLANILR 303
>gi|238756296|ref|ZP_04617611.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473]
gi|238705502|gb|EEP97904.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473]
Length = 315
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 157/289 (54%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H + ++P+ T+GD I + L ++GG
Sbjct: 3 MSDKIIRIATRQSPLAMWQAHYVQQLLQTCHS--GLKVELVPMVTRGDIILDTPLAKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + R+D RD F+S+ Q + D
Sbjct: 61 KGLFVKELELALLEDRADIAVHSMKDVPIAFPQGLGLVTICERDDPRDAFVSNNYQRMDD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ V D RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 121 LPAGSIVGTSSLRRQCQLRQRRPDLIVKDLRGNVGTRLSKLDQGDYDAIILAVAGLNRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 181 LKDRIRYAMSPEESLPAVGQGAVGIECRLDDNLTRALLAPLNHRPTELRVCAERAMNTRL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+G C+ I +A + TL+ +V A DG R G A +G
Sbjct: 241 EGGCQVPIGSYAILEDDTLWLRALVGAPDGSQMICGERRGPATHAEQMG 289
>gi|229175146|ref|ZP_04302662.1| Porphobilinogen deaminase [Bacillus cereus MM3]
gi|228608282|gb|EEK65588.1| Porphobilinogen deaminase [Bacillus cereus MM3]
Length = 309
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 161/285 (56%), Gaps = 8/285 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDTVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ IAG+A + + +V + DG I + + G + + +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGTNPEEVGL 286
>gi|224437777|ref|ZP_03658724.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
gi|313144223|ref|ZP_07806416.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
gi|313129254|gb|EFR46871.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
Length = 323
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 171/297 (57%), Gaps = 14/297 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A ++ L D ++ +I T+GD+I + L +IGGKGLFT+E
Sbjct: 11 IGTRGSALALWQAQYVKNRLKDECRLDSEFKII---KTQGDKILDVPLAKIGGKGLFTKE 67
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+KL+ EID AVHS KD+P ++L L ++A RED RD F+S +SL+ L+ + +
Sbjct: 68 LEQKLLDKEIDLAVHSLKDVPVEILPLLDLAAITEREDCRDCFLSMKYESLESLSQGARV 127
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-----KKE 182
GT+SLRR + +R+D+ + RG I+TRL KL N AI+LA AG+KRL K +
Sbjct: 128 GTTSLRRSMQIKAFRADLDTLSLRGNIQTRLEKLKNGVFDAIILAQAGVKRLGIDVKKND 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I I+ ++ P+ GQGA+ IE ++P E + + H+ + V+ ER+F+ EL+G
Sbjct: 188 MGICHIVPLDFMIPAMGQGALGIEMRKDSPYF-ETISRLTHKRSALCVSAERSFVRELEG 246
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNG----NRCDAINIGRDAAQ 294
C+ I A + L +V +G+ I E + ++ A ++G++ AQ
Sbjct: 247 GCQVPIGVQAMYENGILRLRAMVGLPNGQEILQESLEDSILEEDKAKAESLGKNLAQ 303
>gi|188589216|ref|YP_001922029.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska
E43]
gi|254800242|sp|B2UXC4|HEM3_CLOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188499497|gb|ACD52633.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska
E43]
Length = 290
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 162/291 (55%), Gaps = 10/291 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA S L I ++I+ T+GDR + +L +IGGKGLF ++
Sbjct: 6 IATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFVKD 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + +
Sbjct: 63 IELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E +I +
Sbjct: 123 GTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDENLITD 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++F P+ QGA+ IE + + +I+ E T +V ER+F+ EL G C S
Sbjct: 183 YFDPKEFLPAVSQGALGIECLKDGDANKYFEALIDAEATL-TVEAERSFMKELQGDCHSL 241
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--GNRCDAINIGRDAAQYI 296
I ++ +G LY GI GKI V ++ G + + I +G+ AQ I
Sbjct: 242 IGAYSEIQGDDLYMIGIYDIG-GKI---VKKDILGCKTNNIELGKKLAQKI 288
>gi|186476930|ref|YP_001858400.1| porphobilinogen deaminase [Burkholderia phymatum STM815]
gi|238058733|sp|B2JEN9|HEM3_BURP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|184193389|gb|ACC71354.1| porphobilinogen deaminase [Burkholderia phymatum STM815]
Length = 327
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 167/293 (56%), Gaps = 7/293 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF +
Sbjct: 16 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 72
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L G D AVHS KD+P +L +G +S + RED RD F+S+ SL L SV
Sbjct: 73 ELENALADGRADLAVHSLKDVPMELPEGFVLSTIMEREDPRDAFVSNQYDSLAALPAGSV 132
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A+L ++ V RG ++TRL KL+ AI+LA AG+KRL + I+
Sbjct: 133 VGTSSLRREAMLRARYPELVVKPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLGERIR 192
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+L+ D P+ GQGA+ IE + ++HE T +V ER L GSC+
Sbjct: 193 SLLDPADSLPAAGQGALGIEIRAGRDDLAAWLAPLHHEHTAAAVEAERMVSRTLGGSCEV 252
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCD-AINIGRDAAQYI 296
+A +A L+ GIV DG+ + + S D A+ +GR+ A +
Sbjct: 253 PLAAYATWHDGALHLRGIVATPDGERVLSAQASAPAATTDAALELGREVASQL 305
>gi|229048181|ref|ZP_04193750.1| Porphobilinogen deaminase [Bacillus cereus AH676]
gi|228723168|gb|EEL74544.1| Porphobilinogen deaminase [Bacillus cereus AH676]
Length = 309
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 153/270 (56%), Gaps = 8/270 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAYINDTITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273
+ IAG+A + + +V + DG +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVL 271
>gi|302333336|gb|ADL23529.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 308
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I
Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+
Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IAG+A + F G+++ DGK E + NG + + +G+ + ++
Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTLNGT--NPVELGKKVSNKLK 293
>gi|254467792|ref|ZP_05081198.1| porphobilinogen deaminase [beta proteobacterium KB13]
gi|207086602|gb|EDZ63885.1| porphobilinogen deaminase [beta proteobacterium KB13]
Length = 292
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 149/277 (53%)
Query: 31 HKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTK 90
K P + ++ T+GD I ++ L EIGGKGLF +E+E L++ + D AVHS KD+P
Sbjct: 13 EKYPDTEVNVLSFKTQGDIILDQPLAEIGGKGLFIKELEHALLNDDADLAVHSMKDVPMD 72
Query: 91 LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150
L + +I A RE+ D FIS+ SL DL +VIGTSSLRR++L+ R D+ +
Sbjct: 73 LPEPFEICAISERENPSDAFISNKYASLDDLPQDAVIGTSSLRRQSLIKHTRPDLIIESL 132
Query: 151 RGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN 210
RG ++TRL KL++ AI+LA AG+ RL E IK L+++ + PS GQGA+ IE N
Sbjct: 133 RGNLQTRLKKLDSGIYDAIILASAGLIRLNLENRIKSTLDVKQYIPSVGQGALGIEILKN 192
Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+ +E + +N E T V ER L GSC + A K + L V + DG
Sbjct: 193 KSEVKEFLDFLNDEQTQIQVEAERKISKTLAGSCTVPMGAHASIKNNLLTIQAFVSSPDG 252
Query: 271 KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
+ G + +++ + AQ + KN+
Sbjct: 253 IKMIRATDTGPCSEHLSLANNVAQSLIDQGAKNILGL 289
>gi|228954747|ref|ZP_04116769.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229071973|ref|ZP_04205183.1| Porphobilinogen deaminase [Bacillus cereus F65185]
gi|229081729|ref|ZP_04214222.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2]
gi|229180740|ref|ZP_04308078.1| Porphobilinogen deaminase [Bacillus cereus 172560W]
gi|228602718|gb|EEK60201.1| Porphobilinogen deaminase [Bacillus cereus 172560W]
gi|228701574|gb|EEL54067.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2]
gi|228711132|gb|EEL63097.1| Porphobilinogen deaminase [Bacillus cereus F65185]
gi|228804945|gb|EEM51542.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 309
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 160/285 (56%), Gaps = 8/285 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDEALCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ IAG+A + + +V + DG + + + G + + +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGTNPEEVGL 286
>gi|89900504|ref|YP_522975.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118]
gi|122996949|sp|Q21XQ9|HEM3_RHOFD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89345241|gb|ABD69444.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118]
Length = 315
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 144/267 (53%), Gaps = 4/267 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A + D+ H + ++ ++T GD+I +R L+++GGKGLF
Sbjct: 4 LTIATRESRLALWQA----EYVQDLLTRRGHQVGLLGMTTLGDQILDRALSKVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L G ++ + RED RD F+S+ +L L +
Sbjct: 60 KELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLASLPQGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR ALL R D+ + RG ++TRL KL++ AI+LA AG+KRL + I
Sbjct: 120 VVGTSSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLGLSQRI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ D P+ GQGA+ IE + + + H TW +V+ ERA + GSC
Sbjct: 180 RATFEPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAMGGSCS 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI 272
+A +A L DGK+
Sbjct: 240 MPLAAYATLAADILTIDAAWGDPDGKL 266
>gi|229147034|ref|ZP_04275394.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24]
gi|228636422|gb|EEK92892.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24]
Length = 309
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 155/270 (57%), Gaps = 8/270 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273
+ IAG+A + + +V + DG +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVL 271
>gi|302875078|ref|YP_003843711.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
gi|307690298|ref|ZP_07632744.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
gi|302577935|gb|ADL51947.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
Length = 300
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 157/279 (56%), Gaps = 17/279 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RIGTR S LAL ++ H P N ++ +STKGD I +++L GGKG
Sbjct: 2 KKIIRIGTRKSKLALMQTNIVIDAIKKKH--PEINCEVVEMSTKGDEILDKSLLSFGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDL 121
F E EK + SGEID AVHSAKDMP LL GL+I A RED RDV ++ + ++ D
Sbjct: 60 AFVSEFEKAIKSGEIDLAVHSAKDMPMDLLTGLKIVAVTKREDPRDVLVTANNKDTINDF 119
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR-- 178
+ +IGT+SLRRK + R +++ D RG ++ RL KL + + I+LA AG+KR
Sbjct: 120 NKTNKLIGTTSLRRKLQIKRLLNNVDTKDLRGNVQRRLEKLISGEYDGIILAAAGLKRLG 179
Query: 179 -LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE----LVKVINHEDTWDSVNCE 233
L E++ L++EDF P+ GQG I +E +A+E L I++E+ S+ E
Sbjct: 180 LLDDERINLNYLSVEDFIPAGGQGIIAVE-----GRAEEEFSFLKDSIHNEEAMYSLEVE 234
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
R + +L+ C I +++ T+ F I+ +GK+
Sbjct: 235 RYVMKKLNAGCNEPIGAYSFIDKDTI-FLDIIYEHNGKV 272
>gi|292670850|ref|ZP_06604276.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541]
gi|292647471|gb|EFF65443.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541]
Length = 271
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 139/226 (61%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++TKGDRI + L +IGGKGLFT+E+E+ +++G+ID AVHS KDMPT++ KGL I A
Sbjct: 1 MTTKGDRILDAPLAKIGGKGLFTKELEQAMLAGQIDIAVHSLKDMPTEIPKGLIIGAITK 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
R D D F+S S+++L + + +GTSSLRR+A LL R D+ ++D RG + TRL KL+
Sbjct: 61 RLDPGDAFVSVNYTSIEELPIGAKVGTSSLRRRAQLLAVRPDLQLLDLRGNVNTRLAKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+KRL I+ IL+ P+ GQG + IE ++ + ++ ++
Sbjct: 121 AGDFDAIILAAAGLKRLGLGNRIRSILSQRMMLPAVGQGTLAIECRADDTRILSVIDFLH 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
+ + ERAFL ++G C+ + +A K L ++AS
Sbjct: 181 DRNMSAAAMAERAFLCRVEGGCQIPVGVYADLKEDGLLHVDAMIAS 226
>gi|326792716|ref|YP_004310537.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427]
gi|326543480|gb|ADZ85339.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427]
Length = 301
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 152/266 (57%), Gaps = 5/266 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR S LAL +T+ + ++ K P + + TKGD I ++ L +IG KG+FT+
Sbjct: 5 IGTRGSRLALT---QTKWVIDELEKHYPELACEMKIIKTKGDLIQDKPLDKIGDKGIFTK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHS 125
EIE +L+ G ID AVHS KDMP++L GL+ + L RED RDV I S++DL + +
Sbjct: 62 EIEAELLKGNIDMAVHSMKDMPSELPLGLRFTRTLKREDARDVLILKEGYASIEDLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I T S RRK LL +RSD++++ RG ++TRL KL K I+LA AG+ RL I
Sbjct: 122 TIATGSKRRKYQLLAYRSDLNIVPIRGNVDTRLCKLEEEKLEGIVLAAAGLHRLGLADKI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L +E P+P QGA+ IE + KA +LVKV+ + V ERAF+ ++G C
Sbjct: 182 TCYLPMEIMLPAPAQGALAIEIRQEDTKAYDLVKVLEDPVSSIQVEAERAFMDAINGGCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
I + G+ L G++ GK
Sbjct: 242 MPIGAYCEVIGTKLRMRGLLGDELGK 267
>gi|254292449|ref|YP_003058472.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814]
gi|254040980|gb|ACT57775.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814]
Length = 323
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 151/278 (54%), Gaps = 13/278 (4%)
Query: 7 RIGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IG R SPLA+ A F R + + + I I +T GD++ ++ L + GGKGLF
Sbjct: 22 KIGARGSPLAVQQAEDFAARFKEIVGNTV---EIEIHTFTTSGDQLLDKRLQDAGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T E++ +SG ID VHS KD+PT L GLQ+ YLPRED RD ++KDL
Sbjct: 79 TRELDIAQLSGRIDIVVHSLKDVPTVLPDGLQMGCYLPREDPRDALFGKVG-NIKDLPHG 137
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+SLRR A L R D+ ++ FRG ++TRL KL +A A LLA AG+ RL
Sbjct: 138 ATLGTASLRRSAQALALRPDLKIVMFRGNVQTRLRKLEEGQADATLLAAAGLNRLGMTDK 197
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS---VNCERAFLAELD 241
+ E+ P+ GQG +C T + N + K D +S ERAFL LD
Sbjct: 198 AAGFMPKEEMLPACGQGIVC--TTLTNNAEDWIFKACLQIDVLESRIAAIAERAFLKRLD 255
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277
GSC++ IAG + + G VLA DG + F ++S
Sbjct: 256 GSCRTPIAGHLSFNETGVDMRGEVLADDGSKRWFSQMS 293
>gi|159903036|ref|YP_001550380.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211]
gi|238058998|sp|A9BEB6|HEM3_PROM4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|159888212|gb|ABX08426.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211]
Length = 316
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 162/297 (54%), Gaps = 9/297 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + L H P NI I ++T+GD+I + L +IG KGLFT
Sbjct: 6 LRIATRRSKLAMVQTHWVKEQLEKAH--PGINISIEAMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH- 124
+E+E +++ G D AVHS KD+PT L +GL + RED D + + +SLKD LH
Sbjct: 64 KELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVN--KSLKDKQLHE 121
Query: 125 ----SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ RL
Sbjct: 122 LPPGTILGTSSLRRLAQLRHHYPHLIFKDVRGNLITRLEKLDAGAYDCLILAAAGLTRLG 181
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ E + GQGA+ IE N P+ E++K + HE+T ER+FL EL
Sbjct: 182 FGDRVHQLIPCEISLHAVGQGALGIECVENKPEVLEIIKSLEHEETSQRCLSERSFLREL 241
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I + G L G+V + DGK + S+ G++ + IG++ A ++
Sbjct: 242 EGGCQVPIGVNSQISGQDLILTGMVASLDGKKLIKDSKRGDKSNPELIGKELANELK 298
>gi|218767661|ref|YP_002342173.1| porphobilinogen deaminase [Neisseria meningitidis Z2491]
gi|11386831|sp|Q9JVS4|HEM3_NEIMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|121051669|emb|CAM07972.1| putative porphobilinogen deaminase [Neisseria meningitidis Z2491]
Length = 311
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294
>gi|271962120|ref|YP_003336316.1| hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021]
gi|270505295|gb|ACZ83573.1| Hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021]
Length = 306
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 158/293 (53%), Gaps = 7/293 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S +A + + L ++ + ++ ++T GD +T LT++GG G+F
Sbjct: 7 PLRLGTRRSLMATTQSGLVAARLTELTG---RAVELVGVTTFGD-VTKANLTQLGGTGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ KLI GEID AVHS KD+PT + I+A PR+D RD +S TA+ L DL
Sbjct: 63 VSALRDKLIDGEIDFAVHSLKDLPTTQDPRVVIAAIPPRDDPRDALVS-TAK-LADLPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GT S RR A L R D+ + RG +TR+ K+ + + ++LA AG+ RL +E
Sbjct: 121 SKVGTGSPRRIAQLRVLRPDLEYVPIRGNADTRIGKVTSGELQGVVLAAAGLGRLGREAE 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++ +E+ P+PGQGA+ +E + E + V++ T +V ERA L L+ C
Sbjct: 181 ISQVFEVEEMLPAPGQGALAVECRADRTDLIEFLSVLDDARTRAAVTAERAVLNALEAGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYI 296
+ + ++ G L V+A DGK S G +++GRD AA+ I
Sbjct: 241 AAPVGAYSADDGQNLILTAAVVAVDGKRAVRKSTAGTLSAPMDLGRDLAAEMI 293
>gi|15676445|ref|NP_273584.1| porphobilinogen deaminase [Neisseria meningitidis MC58]
gi|11386833|sp|Q9K0P6|HEM3_NEIMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|7225764|gb|AAF40968.1| porphobilinogen deaminase [Neisseria meningitidis MC58]
gi|254671891|emb|CBA04160.1| Porphobilinogen deaminase [Neisseria meningitidis alpha275]
gi|308388723|gb|ADO31043.1| putative porphobilinogen deaminase [Neisseria meningitidis
alpha710]
gi|316985397|gb|EFV64345.1| porphobilinogen deaminase [Neisseria meningitidis H44/76]
gi|319409917|emb|CBY90242.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS;
pre-uroporphyrinogen synthase) [Neisseria meningitidis
WUE 2594]
gi|325127627|gb|EGC50543.1| porphobilinogen deaminase [Neisseria meningitidis N1568]
gi|325139808|gb|EGC62341.1| porphobilinogen deaminase [Neisseria meningitidis CU385]
gi|325200773|gb|ADY96228.1| porphobilinogen deaminase [Neisseria meningitidis H44/76]
Length = 311
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294
>gi|90416175|ref|ZP_01224107.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207]
gi|90331900|gb|EAS47114.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207]
Length = 326
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 161/295 (54%), Gaps = 4/295 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR SPLAL A ++ L++ H P ++ ++ ++T+GD + + L ++GGKGL
Sbjct: 18 QTIRIATRKSPLALWQAEFVKAKLLENH--PDLDVQLVAMTTRGDVLLDTPLAKVGGKGL 75
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ D AVHS KD+P + GL ++ RED D F+S+ +L +L
Sbjct: 76 FVKELEVAMLENRADIAVHSMKDVPMEFPPGLGLTVICEREDPLDAFVSNRYANLAELPP 135
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+ + D+ + D RG + TRL KL+ AI+LA AG+ RL E
Sbjct: 136 GSVVGTSSLRRQCQIRAAFPDLQIKDLRGNVNTRLAKLDYGDYDAIILASAGLIRLGMEA 195
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I L E P+ GQGA+ IE +++ EL+K + H T V ERA L+G
Sbjct: 196 RIASRLESELCLPAGGQGAVGIECRLDDQATIELLKPLEHSQTRIRVTAERALNRRLEGG 255
Query: 244 CKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ IA +A G +L G+V + DG + + + A +G + A+ +
Sbjct: 256 CQVPIACYAELDEAGESLQLRGLVGSVDGSLILQDQLSAPVAQAEQLGIELAERL 310
>gi|170757497|ref|YP_001780553.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra]
gi|229836107|sp|B1IHD1|HEM3_CLOBK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169122709|gb|ACA46545.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra]
Length = 290
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 155/284 (54%), Gaps = 4/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H I ++I T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
S I +A K + ++ GI + I E++ ++ + + I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 282
>gi|324328367|gb|ADY23627.1| porphobilinogen deaminase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 309
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 164/293 (55%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292
>gi|289642295|ref|ZP_06474444.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata]
gi|289507930|gb|EFD28880.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata]
Length = 313
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SP+ALA A R+ L ++ P I+P++T GDR T L+ +GGKG FT
Sbjct: 9 IRIGTRSSPMALAQAERVRAELTALN--PDLTAEIVPITTSGDRWTG-PLSTLGGKGAFT 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E+++ L++G D AVH KD+P + G +AYLPR+DIRD I ++L L
Sbjct: 66 KEVDEALLAGRADLAVHCMKDVPGDRPVPAGTVFAAYLPRDDIRDALIHPGGRTLDQLPA 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTS++RR A L + + + RG TRL +L++ A A+LLA +G++R+ +
Sbjct: 126 GTRVGTSAVRRIAQLAQSHPHLETVPIRGNANTRLARLDDGAADALLLAVSGLERIGQAG 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EIL+ E P G G + ++ ++ +LV ++ D V ER L L G
Sbjct: 186 RITEILSAETMCPPIGAGVLGLQCREDDTDTAQLVAGMDDIDARRQVTAERMLLHVLQGH 245
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG A+ + L V + DGK + G D +G A + +
Sbjct: 246 CNSPIAGHAHTEPDGRLSLRAKVFSPDGKTVLDAHEWGPGTDPTTLGASVAVALLRQGAQ 305
Query: 303 NVFN 306
++ N
Sbjct: 306 DLLN 309
>gi|91200437|emb|CAJ73484.1| strongly similar to hydroxymethylbilane synthase (porphobilinogen
deaminase) [Candidatus Kuenenia stuttgartiensis]
Length = 319
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 163/298 (54%), Gaps = 4/298 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP +G+R S LAL S L ++ P I +ST GD+IT+ L+ +GG G+
Sbjct: 8 KPIIVGSRGSKLALTQTNWVISELKKLN--PGVEFEIKKISTSGDKITDVPLSRLGGVGV 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E LI +ID AVHSAKD+PT++ + L + A R D DV IS +L+ L
Sbjct: 66 FTKELEVALIKEKIDLAVHSAKDIPTEVSEKLTLGAMPKRVDPSDVLISAKNVTLERLPG 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRRKA LL R D ++D RG ++TRL KL + I++A+AG+ R+
Sbjct: 126 NARIGTSSLRRKAQLLALRPDFEIVDLRGNLDTRLKKLEADDLDGIIVAHAGLIRIGYTG 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EI+ E P+ GQG++ IE ++ + +++ ++ T +V ERA LA+L G
Sbjct: 186 QISEIIPFEIMLPAVGQGSLGIEIRKDDERINKILSKMDDLHTRIAVEAERALLAKLQGG 245
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I A ++ ++ DG+ S G A +G + AQ R + N
Sbjct: 246 CQVPIGAHAKVLNDEVHLEAVICTLDGERTIRDSHKGPANQAAAVGNELAQ--RMLDN 301
>gi|329119508|ref|ZP_08248193.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464441|gb|EGF10741.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 317
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 2/291 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A ++ L ++ P +I I+ L+T+GD+I +RTL++IGGKGLF
Sbjct: 7 LTIASRQSALAMWQAEHIKARLHALY--PACDIRILGLTTRGDQILDRTLSKIGGKGLFI 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ +L L +
Sbjct: 65 KELEQALHDGRADLAVHSIKDVPMELPEGFLLAAIGERASPFDAFVSNRHNTLAALPAGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A + ++V RG ++TRL KL+N + AI+LA AG++RL I
Sbjct: 125 VVGTSSLRREAQIRARHPHLTVKPLRGNVQTRLAKLDNGEYDAIILAAAGLQRLGLNGRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+EIL+ ++ P+ GQGA+ IE + L+ +NH +T V ER L GSC+
Sbjct: 185 REILSPDECLPAAGQGALGIEIAEHRSDLLPLLAPLNHAETAACVTAERTLAQALGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A + L G+V DG + E + A +GR A+ +
Sbjct: 245 IPLAAYCTSDEGLLTLRGLVGHPDGSVLIEAAAQAPAAYARTLGRAVAKRL 295
>gi|229918358|ref|YP_002887004.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b]
gi|259647797|sp|C4L4J6|HEM3_EXISA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229469787|gb|ACQ71559.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b]
Length = 305
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 170/291 (58%), Gaps = 7/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LA+ +T+ + + + N I + TKGD+I + L+++GGKGLF +
Sbjct: 6 VGSRRSQLAMT---QTKWVIEQLKQAGATNEFEIKEIVTKGDQIVDVQLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EI+++++ G+ID AVHS KD+P +L + L IS R D RDV I + + L S+
Sbjct: 63 EIQQQMLDGDIDFAVHSMKDVPAELPEELYISCMPKRVDARDVLICENGYTFETLPKGSI 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185
+GTSSLRR A +L R D+ + RG I+TRL KL++ +AILLA AG++R+ ++V
Sbjct: 123 VGTSSLRRGAQILAARPDLEIQWIRGNIDTRLKKLDSENYNAILLAKAGLERMGWTDRVD 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ + P+ GQG + IE+ ++ + ++++++ + T + ER FL ++GSC
Sbjct: 183 FEALDPDVMVPAVGQGVLAIESRKDDAEVTTVLQLLHDDVTAKAATAERTFLKAIEGSCH 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ G+A G + G++ + DGK V++ D + +G+ A+ +
Sbjct: 243 VPVGGYATVNGDDVTLTGLIASVDGKEVLRVTKTST--DGVALGQAVAEEL 291
>gi|332981813|ref|YP_004463254.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON]
gi|332699491|gb|AEE96432.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON]
Length = 292
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 149/269 (55%), Gaps = 3/269 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LALA S+L ++ P + + T+GDR+ + + IG KG+F
Sbjct: 4 IRVGSRGSRLALAQTDAVISALRSLY--PDIDFERQIVKTEGDRLQHIPVERIGDKGIFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE+ L+ G ID AVHS KD+P++L GL I A RED RD FIS ++++ L +
Sbjct: 62 KDIEQALMDGHIDMAVHSMKDVPSQLPDGLMIGAMPWREDPRDAFISSDGRTIEQLGCRA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IG S RR A L I ++ RG I+TR+NK+N I+LA AG+KRL VI
Sbjct: 122 RIGIGSARRSAQLKNCFPGIDIVAIRGNIDTRINKINEAGLDGIVLAVAGLKRLGVSDVI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+IL ++ P+ GQGA+ IE ++ KA +L+ +NH T +V+ ER F+A + G C
Sbjct: 182 TQILPVDVCTPAAGQGALGIEIRKSDEKAADLLMPLNHAPTRAAVDAERMFMAMMGGDCN 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFH 274
+ I + G + V DG I
Sbjct: 242 TPIGVYGEVDGVDILLRAAV-EKDGCIMR 269
>gi|251778553|ref|ZP_04821473.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082868|gb|EES48758.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 290
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 160/289 (55%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA S L I ++I+ T+GDR + +L +IGGKGLF ++
Sbjct: 6 IATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFVKD 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + +
Sbjct: 63 IELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL + +I +
Sbjct: 123 GTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDKNLITD 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++F P+ QGA+ IE + + +I+ E T +V ER+F+ EL G C S
Sbjct: 183 YFDPKEFLPAVSQGALGIECLKDGDANKYFEALIDAEATL-TVEAERSFMKELQGDCHSL 241
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ KG LY GI GKI + G + + I +G+ AQ I
Sbjct: 242 IGAYSEIKGDDLYMIGIYDIG-GKIVKK-DILGCKTNNIELGKKLAQKI 288
>gi|226948193|ref|YP_002803284.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto]
gi|254800244|sp|C1FVB9|HEM3_CLOBJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226840754|gb|ACO83420.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 155/283 (54%), Gaps = 4/283 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H I ++I T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
S I +A K + ++ GI + I E++ ++ + + I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGI 281
>gi|42783601|ref|NP_980848.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987]
gi|55976457|sp|Q72ZW2|HEM3_BACC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|42739530|gb|AAS43456.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987]
Length = 309
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 164/293 (55%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292
>gi|228993205|ref|ZP_04153126.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442]
gi|228999254|ref|ZP_04158834.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17]
gi|229006801|ref|ZP_04164434.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4]
gi|228754423|gb|EEM03835.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4]
gi|228760451|gb|EEM09417.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17]
gi|228766531|gb|EEM15173.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442]
Length = 309
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 152/270 (56%), Gaps = 8/270 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ EID AVHS KDMP L GL I R D RD FIS +S +DLA +
Sbjct: 62 KEIEHALLMKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFEDLAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDADLLQLLSHMNDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIF 273
+ IAG+A K + +V + DG +
Sbjct: 242 QVPIAGYATLQKNDEIELTALVGSMDGSVL 271
>gi|332798468|ref|YP_004459967.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1]
gi|332696203|gb|AEE90660.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1]
Length = 293
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 148/263 (56%), Gaps = 4/263 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK ++G+R S LAL S L + P + +I + T GD+ N + E+G KG
Sbjct: 2 KKIVKVGSRQSQLALVQTELVISQLKE--HFPQWDFKLITVKTTGDKFLNSNMYELG-KG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F +EIE+ L+SG ID AVHS KD+P +L +GL ISA RED RDVFIS + +L
Sbjct: 59 AFVKEIEEALLSGAIDMAVHSLKDVPHELPEGLAISAITRREDPRDVFISADDRRFSELD 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSS+RR L + R DI + RG I TR+ K+ I+LA AG+KRL E
Sbjct: 119 TGAKIGTSSMRRMCELNKLRQDIECVPIRGNINTRIKKIKTCGLDGIVLAAAGVKRLGME 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I + + ++ P+ GQGA+ +ET ++ + VK IN ++T + ERAF+ + G
Sbjct: 179 NLITDYFSPDEIVPAVGQGALAVETRADDEMSL-FVKYINDDETTCATGAERAFMKVVGG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIV 265
SCK + +A L G++
Sbjct: 238 SCKQPMGAYAEIFDDALKLIGMI 260
>gi|116622285|ref|YP_824441.1| porphobilinogen deaminase [Candidatus Solibacter usitatus
Ellin6076]
gi|116225447|gb|ABJ84156.1| hydroxymethylbilane synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 297
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 149/283 (52%), Gaps = 11/283 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A + L H I + T GD+IT+ L ++G KGLFT+E
Sbjct: 4 IASRGSQLALWQAHWVEAQLQAAG----HECRIEIIKTTGDKITDVPLAKVGTKGLFTKE 59
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G AVHS KD+PT+L +GL + A RED RD I T L +L L + +
Sbjct: 60 IEEALLDGRAQLAVHSLKDLPTELPEGLVLGAVPKREDPRDAVIGKT---LAELPLGAKV 116
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR A L R R D+ V RG ++TRL KL+ + AILLA AG+KRL I E
Sbjct: 117 GTSSLRRSAQLKRLRPDLVVESIRGNLDTRLRKLDEGQYDAILLAAAGMKRLGWGARIAE 176
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
IL + P+ GQGA+ IET L V+NH DT +V ER L L G C+
Sbjct: 177 ILPPDLMCPAVGQGALAIETRAGF----VLPAVLNHADTHTAVLAERGLLGALGGGCQVP 232
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
I A G + G+V A DG G +A IG+
Sbjct: 233 IGAHATVAGGRVRLLGLVAAPDGSEIVRAEAEGASGEAAEIGK 275
>gi|212703312|ref|ZP_03311440.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098]
gi|212673272|gb|EEB33755.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098]
Length = 311
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 159/305 (52%), Gaps = 3/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K I TR S LAL A ++ L + P NI + + T+GD I + L+++GGKG
Sbjct: 2 RKNLVIATRGSQLALWQAEHVKACLESLE--PGLNISLRVIKTRGDIILDVPLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P L +GL + RE D +S+ SL +L
Sbjct: 60 LFVKEIEEALLDGSADLAVHSIKDVPMVLPEGLVLGCVPQREICVDCLLSNRYGSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A LL R D+ ++ RG ++TRL K+ + AI+LA AG+KRL
Sbjct: 120 PGARVGTSSLRRQAQLLNLRPDLEILSLRGNVDTRLRKMKEGEYDAIVLASAGLKRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
F P+ GQGA+ IE ++ + EL+ + H T V ER FLA LDG
Sbjct: 180 ADRMHHFEAASFVPAVGQGALGIECRGDDGEVLELLSRMEHRPTRICVEAERGFLAGLDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFY-GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG A + G+V DG + + G A G A+++
Sbjct: 240 GCQVPIAGHAEMLDDDRFILDGLVAEVDGSVILREQQEGTAATARETGFALARHLLDKGG 299
Query: 302 KNVFN 306
K++ +
Sbjct: 300 KDILD 304
>gi|301055971|ref|YP_003794182.1| porphobilinogen deaminase [Bacillus anthracis CI]
gi|300378140|gb|ADK07044.1| porphobilinogen deaminase [Bacillus cereus biovar anthracis str.
CI]
Length = 309
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 164/293 (55%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS + K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGVPFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVG--IDPKEVGLEAADRL 292
>gi|315658068|ref|ZP_07910940.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590]
gi|315496397|gb|EFU84720.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590]
Length = 310
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 176/306 (57%), Gaps = 11/306 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L S++
Sbjct: 64 IQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPDGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ + ++
Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + L+ ++++ D V ER FLA +DGSC+
Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDVELLALLNQVHNQQVADCVTAERTFLAAMDGSCQV 243
Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFH---EVSRN----GNRCDAINIGRDAAQYIRF 298
I G+A K + F G+++ DGK + E+ N GN+ + I + A + IR
Sbjct: 244 PIGGYATNKTNGDIEFTGLIMTPDGKERYEHTEIGNNPIELGNKVSDVLIEQGAYEIIRK 303
Query: 299 ISNKNV 304
++++ +
Sbjct: 304 LNDQQL 309
>gi|296268254|ref|YP_003650886.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833]
gi|296091041|gb|ADG86993.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833]
Length = 303
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 154/292 (52%), Gaps = 6/292 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S +A + + L ++ ++T GD ++ LT++GG G+F
Sbjct: 4 PLRLGTRKSLMATSQSRRVAERLAQATG---RRSELVGITTFGD-VSRAHLTQLGGTGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E+ LI+GE+D AVHS KD+PTK + I+A PR+D RD F+ +L
Sbjct: 60 VSELRNALIAGEVDFAVHSLKDLPTKGDDRIVIAAIPPRDDPRDAFVGRV--PFSELPPG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT S RR A L R D+ + RG +TRL K+ + + I+LA AG+ R+ +E+
Sbjct: 118 ARVGTGSPRRIAQLRMLRPDLEYVPIRGNADTRLGKVTSGELDGIVLAAAGLGRIGREEA 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++ +E P+PGQGA+ +E + EL+ I+ T D+V ER+ LA L+ C
Sbjct: 178 IAQVFEVEQVLPAPGQGALAVECRADRADLIELLSAIDDRATRDAVTAERSVLAALEAGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A G+ L V++ DG+ S +G A+ +GRD A +
Sbjct: 238 AAPVGAHASGDGNVLSLTAAVVSVDGRRSVRKSVSGPASAAMELGRDLAAAM 289
>gi|27468263|ref|NP_764900.1| porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57867145|ref|YP_188808.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A]
gi|251811065|ref|ZP_04825538.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875909|ref|ZP_06284776.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135]
gi|293366381|ref|ZP_06613060.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|38258087|sp|Q8CNY8|HEM3_STAES RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71152115|sp|Q5HNN3|HEM3_STAEQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|27315809|gb|AAO04944.1|AE016748_178 porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57637803|gb|AAW54591.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A]
gi|251805400|gb|EES58057.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294934|gb|EFA87461.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135]
gi|291319506|gb|EFE59873.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733769|gb|EGG70095.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU045]
gi|329737359|gb|EGG73613.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU028]
Length = 308
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 172/294 (58%), Gaps = 10/294 (3%)
Query: 8 IGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + F + +D P +I I + TKGD+I ++ L+++GGKGLF
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKFID----PSLDIEIKEIVTKGDKIVDKQLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ S
Sbjct: 62 KEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + +
Sbjct: 122 IVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNI 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DGSC
Sbjct: 182 VTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++
Sbjct: 242 QVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLK 293
>gi|255004322|ref|ZP_05279123.1| porphobilinogen deaminase [Anaplasma marginale str. Virginia]
Length = 303
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 159/289 (55%), Gaps = 2/289 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ + P + + + T GD +R L +IGG
Sbjct: 1 MHAPVVRLGTRGSTLALIQAEEVKAAI--AARFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+GSC + +A A S L +LA D + R DA ++G
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVFAERTFPERDAESVG 287
>gi|222475216|ref|YP_002563632.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida]
gi|255003192|ref|ZP_05278156.1| porphobilinogen deaminase [Anaplasma marginale str. Puerto Rico]
gi|269958734|ref|YP_003328521.1| porphobilinogen deaminase [Anaplasma centrale str. Israel]
gi|222419353|gb|ACM49376.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida]
gi|269848563|gb|ACZ49207.1| porphobilinogen deaminase [Anaplasma centrale str. Israel]
Length = 303
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 2/283 (0%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+GTR S LAL A E ++++ P + + + T GD +R L +IGGKGLF +
Sbjct: 7 RLGTRGSTLALIQAEEVKAAI--AAHFPEVRVDVTKIKTSGDVKVDRPLCDIGGKGLFIK 64
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL L +
Sbjct: 65 EIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAK 124
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ I
Sbjct: 125 IGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKIT 184
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ ++GSC +
Sbjct: 185 EVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSCHT 244
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A A S L +LA D + R DA ++G
Sbjct: 245 PLAAMARYVDSGLMSMKCMLAHDSRTMVSAERTFPERDAESVG 287
>gi|30022552|ref|NP_834183.1| porphobilinogen deaminase [Bacillus cereus ATCC 14579]
gi|218235229|ref|YP_002369271.1| porphobilinogen deaminase [Bacillus cereus B4264]
gi|229129756|ref|ZP_04258723.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4]
gi|229152666|ref|ZP_04280854.1| Porphobilinogen deaminase [Bacillus cereus m1550]
gi|296504955|ref|YP_003666655.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171]
gi|39931461|sp|Q817R0|HEM3_BACCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740629|sp|B7HE96|HEM3_BACC4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|29898110|gb|AAP11384.1| Porphobilinogen deaminase [Bacillus cereus ATCC 14579]
gi|218163186|gb|ACK63178.1| hydroxymethylbilane synthase [Bacillus cereus B4264]
gi|228630812|gb|EEK87453.1| Porphobilinogen deaminase [Bacillus cereus m1550]
gi|228653672|gb|EEL09543.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4]
gi|296326007|gb|ADH08935.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171]
Length = 309
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 153/270 (56%), Gaps = 8/270 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C
Sbjct: 182 ITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273
+ IAG+A + + +V + DG +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVL 271
>gi|172039291|ref|YP_001805792.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142]
gi|171700745|gb|ACB53726.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142]
Length = 331
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 161/297 (54%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL
Sbjct: 20 RTIRIGSRKSQLALVQTYWIQEELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKGL 77
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E ++ ++D AVHS KD+PT L +GL + R + D + +H + L
Sbjct: 78 FTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVNETHQDKQLDT 137
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++RL
Sbjct: 138 LPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQRLD 197
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + + GQGA+ IE +P+ +L+KV+ H +T D ERAFL +L
Sbjct: 198 MSDRIHQVIPDDISLHAVGQGALGIECRSGDPEILDLLKVLEHTETRDRCYAERAFLRQL 257
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I + + L G+V + DGK + + G A +G + A +R
Sbjct: 258 EGGCQVPIGVNTKIENNILTLTGMVASLDGKTLIKDTIQGEAAQAEKLGEELALRLR 314
>gi|145588841|ref|YP_001155438.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047247|gb|ABP33874.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 325
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 153/264 (57%), Gaps = 2/264 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I +R L+++GGKGLF +E
Sbjct: 22 IASRESRLAMWQAEHVRDCLKSLY--PQCDVQILGMTTRGDQILDRALSKVGGKGLFVKE 79
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G AVHS KD+P + +G ++ + RED RD F+S+ SL++L +V+
Sbjct: 80 LETALEDGRAHLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEELPKGAVV 139
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TR+ KL+ + AI+LA AG+KRL E I+
Sbjct: 140 GTSSLRREAVLRAKFPHLEVHPLRGNLDTRMGKLDRGEYQAIILAAAGLKRLGLESRIRA 199
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L + + P+ GQGA+ IET +P + + +N T +V+ ER +L GSC+
Sbjct: 200 YLPYDPYTPAAGQGALGIETLSKHPSIKHWLAPLNDLPTLLAVSAERMVSRQLGGSCEVP 259
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271
+A A + + V + DGK
Sbjct: 260 LAAHAVWDNNQMNIRSFVASVDGK 283
>gi|254251705|ref|ZP_04945023.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158]
gi|124894314|gb|EAY68194.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158]
Length = 333
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 167/298 (56%), Gaps = 8/298 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +
Sbjct: 77 KELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAGA 136
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E I
Sbjct: 137 VVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 196
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L ++D PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 197 RALLAVDDSPPAAGQGALGIEIASHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 256
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+A A + LY G V +DG ++ + C A+ DA R +S++
Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGTRVL-----TADACAAVISVADALALGRAVSDE 309
>gi|257465835|ref|ZP_05630146.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
gi|315916992|ref|ZP_07913232.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
gi|313690867|gb|EFS27702.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
Length = 299
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 165/298 (55%), Gaps = 6/298 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K+ +G+R S LALA + L H P + I + T+GD+ + ++
Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L
Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR
Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++E+ + ER F
Sbjct: 179 VKLEEKITEYLDPTIFPPAPAQGALYIQCREKDTEVQKILQSIHNENLEKVLVVEREFSK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
DG C + + ++ +G TL F+ + + + +V N ++ +I R AAQ I
Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHENKRYQTKVVENLSKGK--DIARMAAQEI 294
>gi|148378912|ref|YP_001253453.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502]
gi|153934281|ref|YP_001383295.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397]
gi|153936114|ref|YP_001386843.1| porphobilinogen deaminase [Clostridium botulinum A str. Hall]
gi|166201502|sp|A7FSG8|HEM3_CLOB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201503|sp|A5I0B2|HEM3_CLOBH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148288396|emb|CAL82473.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502]
gi|152930325|gb|ABS35825.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397]
gi|152932028|gb|ABS37527.1| hydroxymethylbilane synthase [Clostridium botulinum A str. Hall]
Length = 290
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 155/283 (54%), Gaps = 4/283 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H I ++I T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ ++LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGVILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
S I +A K + ++ GI + I E++ ++ + + I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGI 281
>gi|329724698|gb|EGG61204.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU144]
Length = 308
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 172/294 (58%), Gaps = 10/294 (3%)
Query: 8 IGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + F + +D P +I I + TKGD+I ++ L+++GGKGLF
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKFID----PSLDIEIKEIVTKGDKIVDKQLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ S
Sbjct: 62 KEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + +
Sbjct: 122 IVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRIGWSDNI 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DGSC
Sbjct: 182 VTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++
Sbjct: 242 QVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLK 293
>gi|167585805|ref|ZP_02378193.1| porphobilinogen deaminase [Burkholderia ubonensis Bu]
Length = 328
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 163/294 (55%), Gaps = 5/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 14 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 71
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +
Sbjct: 72 KELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAGA 131
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + I
Sbjct: 132 VVGTSSLRREAMLRARYPHLQVQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDARI 191
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ ++D PP+ GQGA+ IE + + ++ T +V ER L GSC+
Sbjct: 192 RALIGVDDSPPAAGQGALGIEIASHRADVAAWLAPLHDHATALAVEAERMVSRALGGSCE 251
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGRDAAQYI 296
+A A + LY G V +DGK E + DA+ +GR A +
Sbjct: 252 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTSEECASVMTVADALALGRAVADAL 305
>gi|170759533|ref|YP_001786306.1| porphobilinogen deaminase [Clostridium botulinum A3 str. Loch
Maree]
gi|238058921|sp|B1KY15|HEM3_CLOBM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169406522|gb|ACA54933.1| hydroxymethylbilane synthase [Clostridium botulinum A3 str. Loch
Maree]
Length = 290
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 155/284 (54%), Gaps = 4/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H I ++I T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
S I +A K + ++ GI + + E++ ++ + + I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIVKKEITGTKDQYEKLGIA 282
>gi|254977043|ref|ZP_05273515.1| porphobilinogen deaminase [Clostridium difficile QCD-66c26]
gi|255094370|ref|ZP_05323848.1| porphobilinogen deaminase [Clostridium difficile CIP 107932]
gi|255316123|ref|ZP_05357706.1| porphobilinogen deaminase [Clostridium difficile QCD-76w55]
gi|255518784|ref|ZP_05386460.1| porphobilinogen deaminase [Clostridium difficile QCD-97b34]
gi|255651962|ref|ZP_05398864.1| porphobilinogen deaminase [Clostridium difficile QCD-37x79]
gi|260684926|ref|YP_003216211.1| porphobilinogen deaminase [Clostridium difficile CD196]
gi|260688584|ref|YP_003219718.1| porphobilinogen deaminase [Clostridium difficile R20291]
gi|306521710|ref|ZP_07408057.1| porphobilinogen deaminase [Clostridium difficile QCD-32g58]
gi|260211089|emb|CBA66474.1| porphobilinogen deaminase [Clostridium difficile CD196]
gi|260214601|emb|CBE07178.1| porphobilinogen deaminase [Clostridium difficile R20291]
Length = 301
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 149/265 (56%), Gaps = 3/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL + L K P + I + TKGD I N +L +IG KGLF +E
Sbjct: 5 VGTRGSTLALIQTEWVINELK--KKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126
IE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL +V
Sbjct: 63 IEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + I
Sbjct: 123 IGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKIS 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 183 SYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSCHI 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
+A + ++ G+ S+GK
Sbjct: 243 PMAAYCEIIQDKIHLTGLYGDSEGK 267
>gi|206976024|ref|ZP_03236934.1| porphobilinogen deaminase [Bacillus cereus H3081.97]
gi|217961956|ref|YP_002340526.1| porphobilinogen deaminase [Bacillus cereus AH187]
gi|222097910|ref|YP_002531967.1| porphobilinogen deaminase [Bacillus cereus Q1]
gi|229141205|ref|ZP_04269744.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26]
gi|229198593|ref|ZP_04325295.1| Porphobilinogen deaminase [Bacillus cereus m1293]
gi|226740630|sp|B7HQM4|HEM3_BACC7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800234|sp|B9IZ39|HEM3_BACCQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|206745776|gb|EDZ57173.1| porphobilinogen deaminase [Bacillus cereus H3081.97]
gi|217066883|gb|ACJ81133.1| porphobilinogen deaminase [Bacillus cereus AH187]
gi|221241968|gb|ACM14678.1| porphobilinogen deaminase [Bacillus cereus Q1]
gi|228584875|gb|EEK42991.1| Porphobilinogen deaminase [Bacillus cereus m1293]
gi|228642246|gb|EEK98538.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26]
Length = 309
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 163/293 (55%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V
Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEGGC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + +V + DG + + G D +G +AA +
Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKEKVVGT--DPEKVGLEAADRL 292
>gi|148244854|ref|YP_001219548.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA]
gi|226740640|sp|A5CW34|HEM3_VESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146326681|dbj|BAF61824.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA]
Length = 304
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 168/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A +S L ++ P ++++ ++TKGD+I N +L++IGGKGL
Sbjct: 3 KTLKIATRQSPLALWQAQHVKSRLEKIY--PNLTVILVKITTKGDQILNSSLSKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G D AVHS KD+P ++ + ++ A L E+ D F+S+ S+ DL
Sbjct: 61 FIKELEISIMKGMSDIAVHSMKDVPYEIPQEFELGAILKCENPFDAFVSNHFSSIDDLPK 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ +GT S+RR L R D+ +ID RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 121 NAKVGTCSMRRILQLKVIRPDLQIIDLRGNVNTRLKKLDDGEFDAIILACAGLIRLGFGN 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK+ + P+ GQGAI IE N+ + +L+K + +T + ERA +L+G
Sbjct: 181 RIKQQIPENQNLPAVGQGAIGIEIRENDKEILDLIKPLIDIETSYRIIAERAMNTQLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C +AGFA + G+V D + + G+ A +G + A + + K+
Sbjct: 241 CSVPVAGFATINNKQITLTGLVGNIDTGVILKEKIFGHVSQAEILGIELANKLILLGAKD 300
Query: 304 VF 305
+
Sbjct: 301 IL 302
>gi|319400986|gb|EFV89205.1| porphobilinogen deaminase [Staphylococcus epidermidis FRI909]
Length = 308
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 173/294 (58%), Gaps = 10/294 (3%)
Query: 8 IGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + F + +D P +I I + TKGD+I ++ L+++GGKGLF
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKFID----PSLDIEIKEIVTKGDKIVDKQLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ S
Sbjct: 62 KEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + +
Sbjct: 122 IVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNI 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DGSC
Sbjct: 182 VTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLTKVHNHDVAQCVTAERTFLSEMDGSC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++
Sbjct: 242 QVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLK 293
>gi|319785862|ref|YP_004145337.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1]
gi|317464374|gb|ADV26106.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1]
Length = 301
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/267 (39%), Positives = 149/267 (55%), Gaps = 3/267 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL + + L H P +V++PLST+GD + +R+L IGGKGLF
Sbjct: 4 LRIATRKSPLALWQSEHVAARLRAAH--PGLEVVLVPLSTRGDEVLDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + GE DCAVHS KD+P +L G + A L R D D F+S+ L L +
Sbjct: 62 KELEIAMERGEADCAVHSLKDVPMELEPGFVLPAVLERADPADAFVSNDFADLDALPQGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A L R D+ + D RG + TRL KL+ + HAI+LA AG++RL + I
Sbjct: 122 VVGTSSLRRQAQLRARRPDLQLRDLRGNVNTRLAKLDAGEYHAIILACAGLQRLGLDARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+P Q + E + + L+ ++ H T + ERA L GSC
Sbjct: 182 RARLVPPQWLPAPAQAVVACECRAGDERTIGLLSLLEHAPTRAVIEAERALNRGLHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGK 271
+A +A TL +V A+DG+
Sbjct: 242 VPVAAYAELHDRTLRLQALVGSAADGR 268
>gi|261856741|ref|YP_003264024.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2]
gi|261837210|gb|ACX96977.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2]
Length = 319
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 156/286 (54%), Gaps = 5/286 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ L +H P + ++ ++TKGD++ + L +IGGKGLF
Sbjct: 11 IRIATRESPLAMWQTEFVADELRRLH--PGLRVELVSMTTKGDQLLDSPLAKIGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + GL++ A L D RD F+S+ +SL L +
Sbjct: 69 KELELALMDGRADIAVHSMKDVPMRFPDGLELIAILEGHDPRDAFVSNEYESLAALPAGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ + + + RG I++R+ KL+ AI+LA AG+KR+ + I
Sbjct: 129 VVGTSSLRRETQIRSRYPQLEIKMLRGNIQSRMAKLDRGDYDAIILAAAGLKRMGYDARI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E+ PS GQGA+ IE ++ L+ + H T V ERAF L+G C+
Sbjct: 189 RAELSPEESLPSVGQGALGIEARSDDAAIHALIAPLIHAATTTRVLAERAFNTRLNGGCQ 248
Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKIF--HEVSRNGNRCDAINI 288
I G+A + L+ G+V DG + E++ +A+ +
Sbjct: 249 VPIGGYAMLQDDGNLWLRGMVGRPDGTLTLRDEITGAATEGEALGV 294
>gi|242242934|ref|ZP_04797379.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144]
gi|242233535|gb|EES35847.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144]
Length = 308
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 173/294 (58%), Gaps = 10/294 (3%)
Query: 8 IGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + F + +D P +I I + TKGD+I ++ L+++GGKGLF
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKFID----PSLDIEIKEIVTKGDKIVDKQLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ S
Sbjct: 62 KEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + +
Sbjct: 122 IVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNI 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DGSC
Sbjct: 182 VTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMDGSC 241
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++
Sbjct: 242 QVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLK 293
>gi|296162267|ref|ZP_06845062.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1]
gi|295887534|gb|EFG67357.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1]
Length = 332
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 155/265 (58%), Gaps = 4/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF +
Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L G D AVHS KD+P L +G +S + RED RD +S+T SL L +V
Sbjct: 72 ELEAALADGRADLAVHSLKDVPMALPEGFALSTIMEREDPRDALVSNTYDSLAALPEGAV 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + I+
Sbjct: 132 VGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGERIR 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC+
Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSCEV 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
+A +A L+ GIV DG+
Sbjct: 252 PLAAYATWHDGALHLRGIVATPDGQ 276
>gi|254424552|ref|ZP_05038270.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335]
gi|196192041|gb|EDX87005.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335]
Length = 319
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 159/306 (51%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL ++ L P + + T+GD+I + L++IG KGL
Sbjct: 8 RTIRIGSRKSQLALVQTHWVQAELSKA--FPDITFEVSTMETQGDKILDVALSKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E ++S +D AVHS KD+PT+L +GL + RED D + H + L
Sbjct: 66 FTQELEDDMLSHRVDFAVHSLKDLPTQLPEGLMLGCVTEREDPADALVVHEKHKDKQLDT 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 126 LPEGAVIGTSSLRRLAQLRHHFPHFQFKDIRGNVNTRLRKLDEGEYDAIVLAAAGLNRLD 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I ++L E + GQGA+ IE + ++K + H T ERAFL EL
Sbjct: 186 MSDRIHQLLPAEISLHAVGQGALGIECRSGDEDILTVIKALEHLPTAQRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +G TL GIV + DG+ + + G DA ++G++ A+ +R
Sbjct: 246 EGGCQVPIGVNTRIEGDTLTLVGIVASLDGQQLIKDTVQGAPADAESMGKELAERLREQG 305
Query: 301 NKNVFN 306
+ + +
Sbjct: 306 AQKILD 311
>gi|187933878|ref|YP_001887094.1| porphobilinogen deaminase [Clostridium botulinum B str. Eklund 17B]
gi|254800243|sp|B2TPD7|HEM3_CLOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|187722031|gb|ACD23252.1| hydroxymethylbilane synthase [Clostridium botulinum B str. Eklund
17B]
Length = 290
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 161/291 (55%), Gaps = 10/291 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA L I ++I+ T+GDR + +L +IGGKGLF ++
Sbjct: 6 IATRKSKLAQVQTEIIMGKLKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFVKD 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + +
Sbjct: 63 IELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E +I +
Sbjct: 123 GTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDENLITD 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++F P+ QGA+ IE + + +I+ E T +V ER+F+ EL G C S
Sbjct: 183 YFDPKEFLPAVSQGALGIECLKDGDANKYFEALIDAEATL-TVEAERSFMKELQGDCHSL 241
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--GNRCDAINIGRDAAQYI 296
I ++ +G LY GI GKI V ++ G + + I +G+ AQ I
Sbjct: 242 IGAYSEIQGDDLYMIGIYDIG-GKI---VKKDILGCKTNNIELGKKLAQKI 288
>gi|126701044|ref|YP_001089941.1| porphobilinogen deaminase [Clostridium difficile 630]
gi|122973521|sp|Q180R9|HEM3_CLOD6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115252481|emb|CAJ70324.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Clostridium
difficile]
Length = 301
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 149/265 (56%), Gaps = 3/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL + L K P + I + TKGD I N +L +IG KGLF +E
Sbjct: 5 VGTRGSNLALIQTEWVINELK--KKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126
IE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL +V
Sbjct: 63 IEQQLLDGKIDIAVHSMKDMPSYLANGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + I
Sbjct: 123 IGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKIS 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 183 SYLPVDVVIPAPAQGALAIEIRSNDSAIEGIVNSLKDENTEIQILAERGFLDGVNGSCHI 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
+A + ++ G+ S+GK
Sbjct: 243 PMAAYCEIIQDKIHLTGLYGDSEGK 267
>gi|226228000|ref|YP_002762106.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27]
gi|226091191|dbj|BAH39636.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27]
Length = 309
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 143/251 (56%), Gaps = 7/251 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RIGTR S LAL A + + L D +P ++ +T GDRI +R L+ IG
Sbjct: 1 MMTVPVRIGTRSSELALRQARQVAAQL-DARGVPSE---LVEYTTLGDRILDRPLSAIGE 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
KGLFT E+E L++G IDCAVHS KD+PT +G+ + A L RED RD + A S
Sbjct: 57 KGLFTAELEADLLAGRIDCAVHSLKDLPTADPQGIIVVALLEREDPRDALVVRAGVDAHS 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L + +GTSSLRR+A L RSD+ V + RG + TRL KL+ + A LLA AG+
Sbjct: 117 LDTLPEGARVGTSSLRRRAQLQALRSDLEVCELRGNVGTRLRKLDEGQVDAALLAAAGLH 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L+ ++ +PGQGAI ++ ++ + ++H T +V ERA L
Sbjct: 177 RLGLADRIVAYLDAPEWLSAPGQGAIAVQGRADDEALLSTLSSLDHAPTRVAVTAERALL 236
Query: 238 AELDGSCKSAI 248
A L+G C+ I
Sbjct: 237 AALEGGCQVPI 247
>gi|56416851|ref|YP_153925.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries]
gi|56388083|gb|AAV86670.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries]
Length = 303
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 2/283 (0%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+GTR S LAL A E ++++ P + + + T GD +R L +IGGKGLF +
Sbjct: 7 RLGTRGSTLALIQAEEVKAAI--AAHFPEVRVDVTKIKTSGDIKVDRPLCDIGGKGLFIK 64
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL L +
Sbjct: 65 EIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAK 124
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ I
Sbjct: 125 IGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKIT 184
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ ++GSC +
Sbjct: 185 EVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSCHT 244
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A A S L +LA D + R DA ++G
Sbjct: 245 PLAAMARYVDSGLMSMKCMLAHDSRTMVSAERTFPERDAESVG 287
>gi|261364223|ref|ZP_05977106.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996]
gi|288567837|gb|EFC89397.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996]
Length = 311
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 167/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQAHAQAPAAYAEALGRAVAKKL 294
>gi|255102624|ref|ZP_05331601.1| porphobilinogen deaminase [Clostridium difficile QCD-63q42]
gi|255308450|ref|ZP_05352621.1| porphobilinogen deaminase [Clostridium difficile ATCC 43255]
Length = 301
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 149/265 (56%), Gaps = 3/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL + L K P + I + TKGD I N +L +IG KGLF +E
Sbjct: 5 VGTRGSNLALIQTEWVINELK--KKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126
IE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL +V
Sbjct: 63 IEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAV 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + I
Sbjct: 123 IGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKIS 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 183 SYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSCHI 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
+A + ++ G+ S+GK
Sbjct: 243 PMAAYCEIIQDKIHLTGLYGDSEGK 267
>gi|241762462|ref|ZP_04760539.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241372964|gb|EER62631.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 308
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 154/286 (53%), Gaps = 5/286 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+
Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I SL+ L
Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIG--IPSLEVLPYS 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GT+S RR A + R DI + RG I+TRL KL N + A LLA AG+ RL + V
Sbjct: 122 GCVGTASPRRAAQIRCIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++ P+ GQGAI IE ++ A E V +I+H T +V ER L L+ C
Sbjct: 182 GYDV-PLDQMLPAAGQGAIGIEALADS-AAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIG 289
S IA FA + + +GK + + DA +G
Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGKFSASIDKEISQPSDAFEVG 285
>gi|215272308|ref|NP_001135813.1| hydroxymethylbilane synthase [Nasonia vitripennis]
Length = 356
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 154/277 (55%), Gaps = 7/277 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+ FR+G+R S LAL L D++ P I+ +STKGD+I N +L +IG K
Sbjct: 5 EQNVFRVGSRKSELALIQTEYVIKCLKDLN--PDKEFKIVTMSTKGDKILNISLPKIGEK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
LFTEE+E L + +D VHS KD+PT L +GL + A L RED RD + + +A +L
Sbjct: 63 SLFTEELENALENNRVDFLVHSLKDLPTTLREGLALGAILEREDPRDAVVMSKAFSAFTL 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176
L SVIGTSSLRR A L R + V + RG + TR KL++ K AI+LA AG+
Sbjct: 123 DTLPPGSVIGTSSLRRSAYLARNMPHLKVENIRGNLNTRFKKLDDEKGAYAAIILAVAGL 182
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KR+ E I + L+ E+ GQGA+ +E +P+ L++ +NH T ER+F
Sbjct: 183 KRMGLENRISQYLDSEETLYCVGQGALAVECREVDPRVLSLLEPLNHFHTTLRCVAERSF 242
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L L G C + + + + L G VL+ +GK+
Sbjct: 243 LKYLGGGCSAPVGVSSTLENKELKITGAVLSLNGKVL 279
>gi|254671436|emb|CBA08950.1| Porphobilinogen deaminase [Neisseria meningitidis alpha153]
Length = 311
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 165/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294
>gi|153004241|ref|YP_001378566.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5]
gi|152027814|gb|ABS25582.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5]
Length = 313
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 146/284 (51%), Gaps = 3/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L K P + + L TKGDRI L E+GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVADLLR--AKEPGLEVRLHELVTKGDRILEVPLAEVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P +L GL I A RED RD S ++L L +
Sbjct: 60 KEIEDALLASDAEIAVHSMKDLPAELAPGLAIGAVPEREDPRDALCSPRYKTLAGLPRGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 KVGTSSLRRGAQLKALRPDLQLEMVRGNVETRLRK-ASEALDAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E + + + H +T + ER FL ++G C+
Sbjct: 179 TYVFPAEEMLPAVAQGALALEARAADAPTMARLAALEHPETRVRIEAERGFLGRIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
IAG A +G + +V + DG R+G DA +G
Sbjct: 239 VPIAGHATVQGGRVSMRALVASLDGTRVIRGERSGPAADARQLG 282
>gi|269837831|ref|YP_003320059.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745]
gi|269787094|gb|ACZ39237.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745]
Length = 311
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 147/256 (57%), Gaps = 2/256 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P ++ +ST GDR LT IGG+G+F
Sbjct: 11 VRLGTRGSALAREQTRRVMAALAALR--PDLELIETIVSTAGDRDKRTPLTVIGGQGVFA 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ L++G +D AVHSAKD+PT+ + GL I A+ RED RDV +S +SL DL +
Sbjct: 69 RELQTALLAGTVDVAVHSAKDLPTEPVPGLVIGAFFSREDARDVLVSRDGRSLADLPPGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS RR L R R D+ +D RG ++TRL K+ + A +LA AG+ R+ ++ I
Sbjct: 129 RVGTSSRRRLVALRRLRPDLEAVDLRGNLDTRLRKVREGEVDAAILAAAGLLRMGWQEHI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+++DF P+PGQGA+ IE ++P E++ +N + ER+FL L G C+
Sbjct: 189 TEFLSLDDFVPAPGQGALAIECRADDPAVNEMLAALNDPAAALAARTERSFLRALGGGCR 248
Query: 246 SAIAGFAYCKGSTLYF 261
S I A G T+
Sbjct: 249 SPIGAHATVSGDTVTL 264
>gi|121608027|ref|YP_995834.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2]
gi|121552667|gb|ABM56816.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2]
Length = 345
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 145/257 (56%), Gaps = 4/257 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L + H++ ++ ++T+GD+I +R+L+++GGKGLF
Sbjct: 8 PIVIATRASRLALWQAGHVQALL----QARGHSVQLLGMTTRGDQILDRSLSKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KDMP +L G ++ L RED RD ++S +L+ L
Sbjct: 64 VKELEAALAEGRADIAVHSLKDMPMELPAGFALACVLEREDPRDAWVSPQYATLEALPPG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 124 AVVGTSSLRRQALLQALRPDLRMEPLRGNLDTRLRKLDAGQYQAIVLAVAGLKRLGLEAR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ P+ GQGA+ IE + + H+ +W +V ERA + GSC
Sbjct: 184 IRAPFAPAALLPAAGQGALGIEVRSERQDLCAALAALAHQPSWLAVAAERAVSRAMGGSC 243
Query: 245 KSAIAGFAYCKGSTLYF 261
+A + G+ L
Sbjct: 244 SMPLAAYGQFHGAVLQL 260
>gi|126658960|ref|ZP_01730102.1| porphobilinogen deaminase [Cyanothece sp. CCY0110]
gi|126619758|gb|EAZ90485.1| porphobilinogen deaminase [Cyanothece sp. CCY0110]
Length = 317
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL
Sbjct: 6 RAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E ++ ++D AVHS KD+PT L GL + R + D + H + L
Sbjct: 64 FTKELETAMLQNQVDFAVHSLKDLPTNLPDGLMLGCVTERVNPADALVVNEKHKDKQLDT 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++RL
Sbjct: 124 LPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQRLD 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + + GQGA+ IE +P+ +L+K + H +T D ERAFL EL
Sbjct: 184 MSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILDLLKALEHPETRDRCYAERAFLREL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I + + L G+V + DGK + + G + A +G++ A +R
Sbjct: 244 EGGCQVPIGVNTKIENNFLTLTGMVASLDGKTLIKDTIEGEQDQAEKLGQELAMRLR 300
>gi|255066348|ref|ZP_05318203.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256]
gi|255049558|gb|EET45022.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256]
Length = 312
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L + ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEDFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPATYADALGRAVAKKL 294
>gi|161869466|ref|YP_001598634.1| porphobilinogen deaminase [Neisseria meningitidis 053442]
gi|161595019|gb|ABX72679.1| porphobilinogen deaminase [Neisseria meningitidis 053442]
Length = 316
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 6 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++ R + D F+S+ L++
Sbjct: 64 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALATIGERANPFDAFVSNQYTRLEE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 124 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 184 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 244 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 299
>gi|254995040|ref|ZP_05277230.1| porphobilinogen deaminase [Anaplasma marginale str. Mississippi]
Length = 303
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 2/283 (0%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+GTR S LAL A E ++++ P + + + T GD +R L +IGGKGLF +
Sbjct: 7 RLGTRGSTLALIQAEEVKAAI--AAHFPEVRVDVTKIKTSGDVKVDRPLCDIGGKGLFIK 64
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL L +
Sbjct: 65 EIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAK 124
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ I
Sbjct: 125 IGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKIT 184
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ ++GSC +
Sbjct: 185 EVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSCHT 244
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A A S L +LA D + R DA ++G
Sbjct: 245 PLAAMARYVDSGLMSMKCMLAHDSRTMVFAERTFPERDAESVG 287
>gi|167561971|ref|ZP_02354887.1| porphobilinogen deaminase [Burkholderia oklahomensis EO147]
Length = 278
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 156/264 (59%), Gaps = 2/264 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L SV+
Sbjct: 74 LENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAGSVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ T +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271
+A A +G L+ G V +DG+
Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDGR 277
>gi|312129517|ref|YP_003996857.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132]
gi|311906063|gb|ADQ16504.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132]
Length = 300
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 164/292 (56%), Gaps = 11/292 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RIGTR S LA+ A +S L + I+ + TKGD++ + L++IG KG+FTE
Sbjct: 4 RIGTRVSLLAMWQANYIKSRL----EAAGAETEIVGMETKGDKVLDVALSKIGSKGVFTE 59
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E+KL++GEI AVHSAKDM + L + ++ A+ RE DV ++ A DL+
Sbjct: 60 ELEEKLLNGEIHIAVHSAKDMQSSLAEDFELIAFTEREYPGDVLVADRAL---DLSAPIT 116
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSS+RR A + I +++ RG ++TR+ K+ + + + LAYAG+ R++ +++I
Sbjct: 117 IGTSSVRRIAFFKKHYPHIKLVNMRGNLQTRIQKMRSGQCDGLALAYAGVHRMEYDELIV 176
Query: 187 EILNIEDFPPSPGQGAICIETHVN-NPKAQELVK-VINHEDTWDSVNCERAFLAELDGSC 244
++ F P GQG + +E N + + VK N E+T+ + ERAFL E++G C
Sbjct: 177 HRFPLDQFIPPVGQGTVTVEIAKNLDENIKTFVKNTCNDENTYKCLQAERAFLKEMNGGC 236
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ G A +G + F G + +G EVS D I +G+ AA+ +
Sbjct: 237 SIPVFGHATLEGEEILFKGGITNLEGT--EEVSMEFRGTDPILLGQHAAEQV 286
>gi|319943887|ref|ZP_08018168.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599]
gi|319743120|gb|EFV95526.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599]
Length = 315
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 149/280 (53%), Gaps = 2/280 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR S LAL A L H P + ++ ++T+GD+I +R L EIGGKGLF
Sbjct: 9 PLRIATRESRLALWQANHVAELLRARH--PAAGVALLGMTTRGDQILDRPLAEIGGKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E L G + AVHS KD+P L +G ++A + R D RD F+S SL +L
Sbjct: 67 TKELEVALFDGRAELAVHSLKDVPMDLPEGFDLAAVMTRADARDAFVSTRYASLDELPPD 126
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR A L + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 127 AVVGTSSLRRAAQLQARHPGFRIQPLRGNLDTRLGKLDAGQYDAIVLAAAGLTRLGLADR 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I++ L +++ P+PGQG + IE + ++ + +N + ERA +L G+C
Sbjct: 187 IRQYLPLDEMLPAPGQGMLGIEIRADRDDVRQALAFLNDPEAARIAAAERAVSRQLGGNC 246
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
K+ +A A S +LA D V+R G D
Sbjct: 247 KTPLAAHARFTASGQMQLDALLADDDGRIARVTRVGKVAD 286
>gi|187923070|ref|YP_001894712.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN]
gi|238058734|sp|B2T1D1|HEM3_BURPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|187714264|gb|ACD15488.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN]
Length = 342
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 156/265 (58%), Gaps = 4/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF +
Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L +V
Sbjct: 72 ELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAV 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A+L + V RG ++TRL+KL+ AI+LA AG+KRL + I+
Sbjct: 132 VGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGERIR 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC+
Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSCEV 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
+A +A + L+ GIV DG+
Sbjct: 252 PLAAYATWRDGALHLRGIVATPDGQ 276
>gi|148654060|ref|YP_001281153.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1]
gi|148573144|gb|ABQ95203.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1]
Length = 339
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 162/296 (54%), Gaps = 17/296 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLA+ A ++ L ++ P + ++ + T+GD+I + L +IGGKGL
Sbjct: 11 KTLNIATRKSPLAMWQAEHIKARLESLY--PDLEVNLVTMVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P L +GL + Y RE D F+S+T SL L
Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMVLPEGLILGTYCKRETPTDAFVSNTYDSLDALPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR+ + R D+ + RG ++TRL+KL+ + AI+LA +G+KR++
Sbjct: 129 GAVVGTASLRRQCQIKAHRPDLIIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSD 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK+ ++I+ P+ GQGA+ IE ++ L+K +N + ERA L+G
Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDDAVLSLLKPLNDGQARIRLMAERALNRRLEGG 248
Query: 244 CKSAIAGFAYC-KGS----------TLYFYGIVLASDGKIFHEVSRN----GNRCD 284
C+ IA FA KG+ TL+ G V + DG + + GN+ D
Sbjct: 249 CQVPIAAFAVIEKGAENDDTGSHNKTLWLRGRVGSEDGTTLLKADKRIALMGNQAD 304
>gi|220910316|ref|YP_002485627.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425]
gi|219866927|gb|ACL47266.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425]
Length = 322
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 160/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L P + + +ST+GD+I + L +IG KGL
Sbjct: 10 RTIRIGSRKSQLALVQTYWVQEQLQ--KHFPDRSFEVHTMSTQGDKILDVALAKIGDKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E+ ++S E D AVHS KD+PT L GL + RE+ D + + + L+
Sbjct: 68 FTKELEQGMLSQETDFAVHSLKDLPTHLPDGLILGCITERENPADALVMNEKYRDRPLET 127
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++RL
Sbjct: 128 LPEGAVIGTSSLRRLAQLRHYFPHLTFKDVRGNVNTRLAKLDAGEYDALVLAVAGLQRLG 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL E + GQGA+ IE ++P+ L+K + H+ T ERAFL EL
Sbjct: 188 FSDRIHQILPPEISLHAVGQGALGIECRSDDPEVLSLIKALEHQPTAWRCLAERAFLREL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I +G L G+V + DG+ + G A +G + AQ +R
Sbjct: 248 EGGCQVPIGVNTQLEGDQLTLTGLVASLDGQRLIKDQITGAATTAEQMGTELAQRLR 304
>gi|312793378|ref|YP_004026301.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180518|gb|ADQ40688.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 290
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 139/249 (55%), Gaps = 3/249 (1%)
Query: 41 IPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100
+P+ TKGD ++L E G+F +EIE L+S EID AVHS KD+P ++ +I A
Sbjct: 36 VPIKTKGDIDKTKSLKEFKSPGVFVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAV 95
Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
+ RED RDV +S L ++ IGTSSLRR+ L R DI VI+ RG IETRL+K
Sbjct: 96 VEREDPRDVLVSKDGLGFYQLKSNAKIGTSSLRREVHLKNLREDIQVINIRGNIETRLSK 155
Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
+ + I+LAYA +KRLK + + I +I + P PGQGAICIE ++P L K
Sbjct: 156 IQSEGLDGIVLAYAALKRLKLDSYVSYIFDINEITPCPGQGAICIECLKDSPYKSILSK- 214
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
IN D + ER L L G C S+I F + +Y + +L D + + S G
Sbjct: 215 INDADAYIQTQFERLVLKFLGGGCHSSIGVFCKTDQNKIYAFASLLRGDKLV--KASIEG 272
Query: 281 NRCDAINIG 289
N+ D +++
Sbjct: 273 NKDDFLSLA 281
>gi|254283408|ref|ZP_04958376.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B]
gi|219679611|gb|EED35960.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B]
Length = 303
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 149/267 (55%), Gaps = 5/267 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLAL A L ++H P + ++ ++++GD++ +R L ++GGKGLF +E
Sbjct: 6 IATRESPLALWQANHVADRLSELH--PELEVELLGMTSRGDQLLDRPLYKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L GL + RED D + L + +
Sbjct: 64 LETALQDGSADIAVHSMKDVPMALPPGLTLGVICEREDPTDSLVG--VSGFDQLPQGARV 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR + LLR R D+ + RG + TRL KL+ + +AI+LA AG+KRL E I +
Sbjct: 122 GTSSLRRGSQLLRHRPDLEIGFLRGNVNTRLAKLDAGEFNAIILASAGLKRLGFEDRIGQ 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+++ + P+ GQGA+ IE + + EL+K ++H T V ERA + LDG C
Sbjct: 182 LIDPDLSLPAGGQGAVGIEYRDGDDRIAELLKPLHHVQTAACVLAERALVRRLDGGCDVP 241
Query: 248 IAGFAYCKG-STLYFYGIVLASDGKIF 273
IA FA G L+ G V +++GK
Sbjct: 242 IASFALPDGDGGLWLRGRVGSTEGKTL 268
>gi|330684284|gb|EGG96022.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU121]
Length = 298
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 157/270 (58%), Gaps = 4/270 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKQVR--PELDIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L S+I
Sbjct: 64 IQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + +L++ ++++D V ER FLAE+DGSC+
Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDKELLDLLQEVHNKDVEKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHE 275
I G+A + F G+++ DG +E
Sbjct: 244 PIGGYATINSQQQIEFTGLIMTPDGTERYE 273
>gi|81299776|ref|YP_399984.1| porphobilinogen deaminase [Synechococcus elongatus PCC 7942]
gi|161621822|ref|YP_171285.2| porphobilinogen deaminase [Synechococcus elongatus PCC 6301]
gi|123755408|sp|Q31PM2|HEM3_SYNE7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81168657|gb|ABB56997.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 7942]
Length = 320
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 148/271 (54%), Gaps = 5/271 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIG+R S LAL + L ++ P + +ST+GD I + L +IG KGL
Sbjct: 7 RPIRIGSRKSQLALVQTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
FT+E+E +++GE+D AVHS KD+PT+L +GL + RED D + H L+
Sbjct: 65 FTKELEVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLET 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL
Sbjct: 125 LPEGTVIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLS 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + GQGA+ IE +P+ EL+K + HE T ERAFL EL
Sbjct: 185 MADRIHQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLREL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
+G C+ I TL G+V + DG+
Sbjct: 245 EGGCQVPIGVNTAIADGTLTLTGMVASLDGQ 275
>gi|221065751|ref|ZP_03541856.1| porphobilinogen deaminase [Comamonas testosteroni KF-1]
gi|220710774|gb|EED66142.1| porphobilinogen deaminase [Comamonas testosteroni KF-1]
Length = 314
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 145/254 (57%), Gaps = 4/254 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA+ A ++ L + H++ ++ ++TKGD+I +R L+++GGKGLF +E
Sbjct: 13 IATRESQLAMWQAEHVQAIL----RGRGHSVDLLGMTTKGDQILDRALSKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +V+
Sbjct: 69 LEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ I+
Sbjct: 129 GTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSDRIRA 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 189 RFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCSMP 248
Query: 248 IAGFAYCKGSTLYF 261
+A + + L+
Sbjct: 249 LAAYGRFESDILHM 262
>gi|85711585|ref|ZP_01042643.1| Porphobilinogen deaminase [Idiomarina baltica OS145]
gi|85694737|gb|EAQ32677.1| Porphobilinogen deaminase [Idiomarina baltica OS145]
Length = 310
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 156/287 (54%), Gaps = 4/287 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR S LA+ A ++ L ++ P I ++P+ST+GD I + L +IGGKGL
Sbjct: 3 KTVRIATRKSKLAMWQAEHIQARLASLY--PELTIELVPMSTRGDIILDTPLAKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G D AVHS KD+P + GL++ ED RD F+S+ QSL +L
Sbjct: 61 FVKELEAAMLEGRADLAVHSMKDLPVEFPPGLELHTICESEDPRDAFVSNHYQSLNELPE 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+ +
Sbjct: 121 GAVVGTCSLRRRCQVKERFPHLIINDLRGNVQTRLRKLDEGQFDAIILAASGLIRLELGE 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + +ED P+ GQG + IE ++ + + L++ + T V ERA L G
Sbjct: 181 RITSFIPVEDSLPANGQGVLGIEVRSDDDEIKALLEPLQCPTTRFRVLAERAMNRRLQGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVSRNGNRCDAINI 288
C+ I FA G L G+V DG I E+ + +A+ I
Sbjct: 241 CQVPIGAFAVVDGDHLSLRGLVGDPDGVEVIREEIQGPVEQAEALGI 287
>gi|306819824|ref|ZP_07453478.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304552071|gb|EFM40008.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 301
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 164/301 (54%), Gaps = 19/301 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV--HKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M+ + RI R S LAL ++D+ K N I+ + T GD+ L+EI
Sbjct: 1 MKMQTVRIAGRKSKLALVQT----QRVIDLLKQKYKDVNFEIVTVETLGDKNLKEKLSEI 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQS 117
G KGLFT EIE+ L++G +D AVHS KDMPT ++ L+I AY+ RE +DV + + +S
Sbjct: 57 GTKGLFTFEIEQMLLNGSVDMAVHSLKDMPTDFIRDLKIGAYIKRESNKDVIVFNKDYKS 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+KDL ++ IGTSSLRR+ + + D V + RG I TRL ++ + AI+LA +
Sbjct: 117 VKDLPKNAKIGTSSLRREVQIKKLGKDFEVANIRGNIHTRLKRMKDENFDAIILAKVALT 176
Query: 178 RLKKEKVIKEILNIEDFP--PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL +++ L E+ P + GQG IC++ +N K +++++ +N +T V ER
Sbjct: 177 RLN----LQDELVFEELPFVSAAGQGCICVQVKKDNKKIEKMLEFLNDAETQSCVMAERE 232
Query: 236 FLAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
FL + G C + + AYC+ G Y V + DGK + +S D N+G+ A
Sbjct: 233 FLHTIGGGCHTPVG--AYCEKIGQIYRIYAFVSSLDGKKY--LSCEIKSKDTENLGKQTA 288
Query: 294 Q 294
Q
Sbjct: 289 Q 289
>gi|149174132|ref|ZP_01852760.1| porphobilinogen deaminase [Planctomyces maris DSM 8797]
gi|148847112|gb|EDL61447.1| porphobilinogen deaminase [Planctomyces maris DSM 8797]
Length = 318
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 161/300 (53%), Gaps = 7/300 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
EK+P RI TR S LAL A+ L P I I+ ++++GDR L+E GG
Sbjct: 6 EKRPLRIATRASNLALWQAYYVSDLLKKQSSERP--IEIVHITSEGDRDLTSPLSEFGGL 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117
G+FT E++K ++ G D AVHS KD+PT+ GLQ++ R + DV I S +
Sbjct: 64 GVFTREVQKAVLDGRADLAVHSLKDLPTEQAPGLQLAGIPERGPLYDVLIFPQGSEAVEH 123
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ DLA + IGT SLRR+A LL RSD+ +++ RG +ETRL KL+ + A+ LA AG+
Sbjct: 124 ITDLADDARIGTGSLRRRAQLLHQRSDLQMLEVRGNVETRLKKLDAGEYDALCLAEAGMV 183
Query: 178 RLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL+ E+ +L + P+ GQGA+ IE ++ + L+ ++ T + ER+
Sbjct: 184 RLELLEQRASLLLQPPEVYPAVGQGALGIECRADDEETAALLAGLSDPPTQAATTAERSL 243
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
LA L C + I + L +VL++DG S G+ +A +IG A+ +
Sbjct: 244 LAHLRAGCHAPIGSLSQTTVDQLTLEAVVLSADGVERICASVTGSLTEAADIGVKVAKAL 303
>gi|311745811|ref|ZP_07719596.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1]
gi|126576013|gb|EAZ80291.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1]
Length = 312
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 169/310 (54%), Gaps = 15/310 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +IGTR S LAL A+ L V IVII TKGD+I + ++ +IG KG+
Sbjct: 3 KLIKIGTRGSKLALWQAYYVEELL--VKAGLKAEIVII--DTKGDQILDVSIAKIGSKGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E +L+ G ID AVHSAKDM + L +G +I A+ RE DV SH KD+ L
Sbjct: 59 FTQELEDQLLDGRIDIAVHSAKDMQSNLPEGFEIIAFTERETENDVLASHK----KDIDL 114
Query: 124 HS-----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+GTSS RR A L + + ++ RG ++TR+ K+ A+LLAYAG+ R
Sbjct: 115 SGASKPLTLGTSSTRRVATLKHFYPHVKTVEVRGNLQTRIRKMEEGLCDALLLAYAGVHR 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKA-QELVKVINHEDTWDSVNCERAF 236
+ +++I + L++ +F P+ GQG++ IE +P+ ++++ NH +T + ERA+
Sbjct: 175 MGYDEMIAQKLDLNEFTPAVGQGSVAIEVAEKLDPEVKKQIIDACNHTETSLKLRAERAY 234
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L L+G C + A +G + G +++ DG + +G+ D IG+ A+ +
Sbjct: 235 LRVLEGGCSIPVFALATMEGEEIKLKGGIVSLDGSERISLLVSGSASDPEKIGKQLAKEV 294
Query: 297 RFISNKNVFN 306
K + +
Sbjct: 295 FAAGGKVILD 304
>gi|224372609|ref|YP_002606981.1| porphobilinogen deaminase [Nautilia profundicola AmH]
gi|223588468|gb|ACM92204.1| porphobilinogen deaminase [Nautilia profundicola AmH]
Length = 291
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 150/248 (60%), Gaps = 8/248 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A +S L + H I + ++T GD+I ++ L EIGGKGLF +E
Sbjct: 5 IATRGSKLALWQAEWVKSKLEKLG----HEIDLKIVTTTGDKILDKPLAEIGGKGLFIKE 60
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALHSV 126
+E+ L+ G+ AVHS KD PT+ A +P RE + DVF+S ++L +L ++V
Sbjct: 61 VEEALLKGDAQIAVHSLKDFPTQYETDHFTLAAIPVREAVEDVFLSENFETLAELPHNAV 120
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSS+RR L +R D+ + D RG ++TR+NKL + K AI+LA+AG+KRL K +K
Sbjct: 121 VGTSSIRRAMQLKAFRDDLVITDLRGNVDTRINKLKDGKYDAIILAHAGVKRLGLLKSVK 180
Query: 187 --EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+L+ + P+ GQGA+ IET +N+PK E VK +N T V ER F+ L+ C
Sbjct: 181 YFEVLDTDIMIPAMGQGALGIET-INDPKVIEAVKPLNDFRTQICVTIERDFVDTLNLGC 239
Query: 245 KSAIAGFA 252
+ + +A
Sbjct: 240 HAPVGVYA 247
>gi|257069787|ref|YP_003156042.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810]
gi|256560605|gb|ACU86452.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810]
Length = 337
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 139/258 (53%), Gaps = 9/258 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL + ++L+D H + ++ +ST+GDR L +IGG
Sbjct: 1 MTGASLRIGTRASDLALTQSGHVGAALVDGTG---HEVELVHVSTRGDRDRTSPLAQIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ G +D VHS KD+PT L+ + ++ Y PRED RD + +L
Sbjct: 58 TGVFVTAVRQALLDGTVDVVVHSCKDLPTAPLEEITLACYPPREDPRDALCARDGLTLAQ 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178
L S +GT S RR A LLR R D+ V RG +ETRL + +A A++LA +G++R
Sbjct: 118 LPAGSRVGTGSPRRAAQLLRARPDLEVTGIRGNVETRLKRALGPEADLDAVVLAASGLRR 177
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCER 234
+ +E VI E+L +E P+P QGA+ +E P E + ++ T +V ER
Sbjct: 178 VGREAVISELLPVEVMLPAPAQGALAVEATTAALAQEPWFAERLTAVDDPATRAAVTAER 237
Query: 235 AFLAELDGSCKSAIAGFA 252
L L+ C + +A +A
Sbjct: 238 MLLRTLEAGCSAPVAAYA 255
>gi|67924108|ref|ZP_00517554.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501]
gi|67854033|gb|EAM49346.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501]
Length = 318
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL
Sbjct: 6 RAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
FT+E+E ++ ++D AVHS KD+PT L +GL + R + D + H + L
Sbjct: 64 FTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVHEKHRDKQLDT 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SVIGTSSLRR A L ++ D RG + TRL KL++ + AI+LA AG++RL
Sbjct: 124 LPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLGKLDSGEYDAIILAVAGLQRLD 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + + GQGA+ IE +P+ EL+KV+ +T D ERAFL +L
Sbjct: 184 MSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILELLKVLEDTETRDRCYAERAFLRQL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I + + L G+V + DGK + + G A ++G+ A +R
Sbjct: 244 EGGCQVPIGVNTKIENNVLTLIGMVASLDGKTLIKDTIEGEPSQAESLGQTLATRLR 300
>gi|229087029|ref|ZP_04219183.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44]
gi|228696292|gb|EEL49123.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44]
Length = 309
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 163/293 (55%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ EID AVHS KDMP L GL I R D RD FIS +S +LA +
Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFAELAEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
+GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + V
Sbjct: 122 TLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQGA+ IE ++ +L+ IN T +V+ ER FL +L+G C
Sbjct: 182 ITEHLDETLCVPAVGQGALAIECRGDDKDLLQLLSHINDGVTERTVSAERVFLHKLEGGC 241
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ IAG+A + + + +V + +G + + + G D +G +AA +
Sbjct: 242 QVPIAGYATLQENNEIELTALVGSVEGSVLLKETVTG--MDPEQVGLEAADRL 292
>gi|168178318|ref|ZP_02612982.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916]
gi|182670871|gb|EDT82845.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 155/284 (54%), Gaps = 4/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H I ++I T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSNLAQVQTEIIIDLLNKKHDIKCEKLLI---ETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK ++L K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEIMEEHPK-KDLFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
S I +A K + ++ GI + I E++ ++ + + I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 282
>gi|170703456|ref|ZP_02894225.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10]
gi|170131633|gb|EDT00192.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10]
Length = 304
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 155/276 (56%), Gaps = 3/276 (1%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L
Sbjct: 16 PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGRADLAVHSLKDVPMALPD 75
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
G ++A + RED RD F+S+ SL L +V+GTSSLRR+A+L + V+ RG
Sbjct: 76 GFALTAIMEREDPRDAFVSNDYASLDALPPGAVVGTSSLRREAMLRARYPHLDVLPLRGN 135
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
++TRL+KL+ AI+LA AG+KRL E I+ ++++ED PP+ GQGA+ IE +
Sbjct: 136 LDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPPAAGQGALGIEIAAHRTD 195
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ ++ T +V ER L GSC+ +A A + LY G V +DG+
Sbjct: 196 VAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAAHAVWRAGELYLTGRVSTTDGQRV 255
Query: 274 HEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306
G DA+ +GR + + ++ N
Sbjct: 256 LTAEECGAVMTVADALALGRAVSDELEAQGALDIVN 291
>gi|298493147|ref|YP_003723324.1| porphobilinogen deaminase ['Nostoc azollae' 0708]
gi|298235065|gb|ADI66201.1| porphobilinogen deaminase ['Nostoc azollae' 0708]
Length = 322
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 159/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL
Sbjct: 9 RPIRIGSRKSQLALVQTYWVQEQLQ--KSFPNITFEVHTMSTQGDKILDVALAKIGDKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E ++I+ EID AVHS KD+PT L +GL ++A RE+ D + H Q ++
Sbjct: 67 FTKELELRMINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVLHKKHKDQQIET 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 127 LPAGAVIGTSSLRRLAQLRYKFPHFTFKDVRGNLITRIGKLDAGEYDALILAVAGLERLD 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL + + GQGA+ IE ++ + L+K I H T D ER+FL L
Sbjct: 187 MSHRIDQILPPDISLHAVGQGALGIECRSDDTEVISLLKAIEHSQTRDRCLAERSFLRVL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I L G+V + DG+ + + G DA +G A+ +R
Sbjct: 247 EGGCQVPIGVDTQINSKELTLKGLVASVDGQKLVKDTVTGTAADAEKLGAQLARILR 303
>gi|298527685|ref|ZP_07015089.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511337|gb|EFI35239.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 313
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 160/298 (53%), Gaps = 2/298 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A S L + + + ++ + T GD+I + L ++GGKGLF +E
Sbjct: 6 IATRGSKLALWQAEHISSRLRE--RYSGLEVELLKVKTTGDKILDVPLAKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G D AVHS KDMP +L +GL++ RE DV +S + + L + +
Sbjct: 64 IEEALMDGRADIAVHSMKDMPAELPRGLKLGIIPERESRFDVLLSTSYPDISSLPTGATV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A +L R D+ + RG ++TRL KL AI++A AG+ RL
Sbjct: 124 GTSSLRRQAQILHMRPDLEIQMLRGNLDTRLRKLKEGIYDAIIVAAAGMSRLNMHADYVT 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+ F P+ GQGA+ IE + + EL+ ++ T + CERAFLAEL+G C+
Sbjct: 184 ELSPPYFLPAVGQGALGIEYLQDRQELDELLGFMDDFSTRYCIECERAFLAELEGGCQVP 243
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA + +G+ + G+V G+ S +G DA ++G D A+ + + +
Sbjct: 244 IACYCRHEGNNIQATGLVCDLKGERMIRKSVSGKPKDARSLGVDMARQVLEAGGREIL 301
>gi|167042167|gb|ABZ06900.1| putative porphobilinogen deaminase, dipyromethane cofactor-binding
domain protein [uncultured marine crenarchaeote
HF4000_ANIW93H17]
Length = 311
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 158/292 (54%), Gaps = 4/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F +GTR S L+LA S L K P I ++TKGD T R L I KG+F
Sbjct: 3 FLVGTRGSNLSLAQTNWVISELQ--KKNPSSEFEIKTITTKGDTDT-RALFTIDQKGIFE 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L +
Sbjct: 60 KEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGSNLKTIQLSA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL + V
Sbjct: 120 VVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGLD-VK 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C+
Sbjct: 179 HSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIEAERALSDYVESGCR 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ A L + DGKI ++ + G+ + N+G++ + ++
Sbjct: 239 FPVGALAIANSGMLKLTVSAYSVDGKISIKLEKTGDVDNPKNLGQELGKELK 290
>gi|300774730|ref|ZP_07084593.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910]
gi|300506545|gb|EFK37680.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910]
Length = 302
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 159/297 (53%), Gaps = 16/297 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A E L + + + I+P+ + GD+ N+ L +G G+
Sbjct: 2 KSIRIGTRNSALALWQAREVARHLQNNNYLTE----IVPIVSSGDKNLNQPLYSLGITGV 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT +++ L++ EID AVHS KD+PT+L + +++ AYL R+ +D+ I +S ++
Sbjct: 58 FTRDLDIALLNDEIDIAVHSLKDVPTQLPQNIEMIAYLERDYPQDILIRK--ESSRNKEF 115
Query: 124 HSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
H + + TSSLRR+A LR D RG I+TRL KL A +L+ AGIKR+K E
Sbjct: 116 HELKLATSSLRRRAFWLRNYPTAEFSDIRGNIQTRLQKLEEGDFDATILSLAGIKRMKME 175
Query: 183 KVIKEILNIEDFP---PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ E P +P QG I + H + P+ E+V+ INH++T V ER FL+
Sbjct: 176 ------IDYEMLPLMISAPSQGVISVAGHTDKPEINEIVRQINHQETQICVEIERNFLST 229
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L+G C + I FA G + F + + DGK V N A N G A+ +
Sbjct: 230 LEGGCTAPIGAFAEIIGDQIRFKAALCSLDGKNCIAVDENFVYTPAENFGEKYAKVV 286
>gi|167569219|ref|ZP_02362093.1| porphobilinogen deaminase [Burkholderia oklahomensis C6786]
Length = 280
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 156/264 (59%), Gaps = 2/264 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L +V+
Sbjct: 74 LENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ T +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271
+A A +G L+ G V +DG+
Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDGR 277
>gi|325282435|ref|YP_004254976.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP]
gi|324314244|gb|ADY25359.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP]
Length = 310
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 157/290 (54%), Gaps = 5/290 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGKGLFT 65
+GTR S LAL+ L + P I ++TKGD R + +++ + G KG +
Sbjct: 6 VGTRGSTLALSQTRWVVERLK--EQWPETEFRIQTITTKGDKNRASLQSMAKAGDKGFWI 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALH 124
+EI+ L++ ID AVHS KD+PT+ +GL I++ R D RDV + +SL DL
Sbjct: 64 KEIQDALLAKSIDIAVHSLKDLPTEQTEGLDIASIPKRADARDVLVGAEGFKSLADLPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS+RR+A L +R D+ VI RG IETR+ + ++ A++LA AG+ R +
Sbjct: 124 ARIGTSSVRRRAFLKAFRPDLQVIPVRGNIETRMAAVASDDYDAVILAGAGLIRTDQRHR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E ++ + P+PGQGA+ +E ++ E+ IN T D + ER FLA L C
Sbjct: 184 ADEFVSTDILLPAPGQGALALEVRADDDLIAEVAYAINDAVTDDRITAEREFLAGLGAGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+ + FA KG L G V A DG + + +G+ + ++G + A+
Sbjct: 244 LAPVGAFATVKGDLLTLEGWVGAVDGSEVIKATTSGDASECADLGAELAE 293
>gi|332968975|gb|EGK08019.1| hydroxymethylbilane synthase [Kingella kingae ATCC 23330]
Length = 312
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 164/305 (53%), Gaps = 7/305 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A ++ L ++ P I I+ ++T+GD+I ++TL++IGGKGL
Sbjct: 5 KKLTIASRESALAMWQARHIQAQLQALY--PDCQIDILGMTTQGDQILDKTLSKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L D AVHS KD+P L +G + A R + D F+S+ L+DL
Sbjct: 63 FIKELETALQENRADLAVHSIKDVPMDLPEGFALVAIGERANPFDAFVSNQYARLEDLPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ +
Sbjct: 123 GAIVGTSSLRREAQLRARFPHLNIKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L+ D P+ GQGA+ IE + + + +NH T V ERA L GS
Sbjct: 183 RIRSVLSPADSLPAAGQGALGIEIAAHRADLVQTLLPLNHAKTAACVTAERALARALGGS 242
Query: 244 CKSAIAGFAYCKG---STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ +A AYC L +G+V DG + V A +GR A+ +
Sbjct: 243 CQVPLA--AYCTADDNGVLTLHGLVAHPDGSVMLTVQAQAPAEYADALGRAVAKKLADDG 300
Query: 301 NKNVF 305
K+V
Sbjct: 301 AKDVI 305
>gi|262038272|ref|ZP_06011662.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264]
gi|261747739|gb|EEY35188.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264]
Length = 316
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 164/309 (53%), Gaps = 22/309 (7%)
Query: 8 IGTRCSPLALAHAFETRSSLM----------------DVHKIPPHNIVIIPLSTKGDRIT 51
IGTR S LALA A + + L+ D +K I + + T GD+
Sbjct: 8 IGTRGSILALAQAEKVKEMLIAKYDELRKKEDFKGISDFNKNESLTIELKIIVTTGDKDL 67
Query: 52 NRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108
R +I G K LF +EIEK+++ +ID AVHS KDMP + +GL + + RED RD
Sbjct: 68 -RDFDKIKGTTQKELFVKEIEKEMLENKIDFAVHSLKDMPQQTPEGLLNACFPLREDNRD 126
Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
V +S + + L +L SVIGT S+RR+ LL R DI + RG I TRL KL+N + A
Sbjct: 127 VIVSKSGKKLNELREKSVIGTGSIRRETELLNLRKDIIIKPIRGNIHTRLKKLDNGEYDA 186
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
I+LA AG+KR I E E F P+PGQG +CI+ N+ + +EL+++IN ++
Sbjct: 187 IILAAAGLKRTGLSDRITEYFEDEVFMPAPGQGILCIQCRENDDRIRELLEIINDKEVGI 246
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
ER F DG C + I + +G+TL G+ +IF E+ G++ + I
Sbjct: 247 MCETEREFSRIFDGGCHTPIGCSSTIEGNTLKLKGVYNKDGKRIFSEIE--GDKNNPKEI 304
Query: 289 GRDAAQYIR 297
+ A+ I+
Sbjct: 305 AQKLAKEIK 313
>gi|303326737|ref|ZP_07357179.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3]
gi|302862725|gb|EFL85657.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3]
Length = 310
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 151/284 (53%), Gaps = 3/284 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K I TR S LAL A +S L + P + + + TKGD I + L+++GGKG
Sbjct: 2 RKHLVIATRGSRLALWQAEHVKSRLE--AQDPGLTVSLNVIKTKGDIILDVPLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P L +GL + RE D F+S L
Sbjct: 60 LFVKEIEEALLDGRADLAVHSIKDVPMVLPEGLILGCVPQREACTDCFLSVHYADPDALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A LL R D+ + RG ++TRL KL N + AI+LA AG+ RL
Sbjct: 120 QKAHVGTSSLRRQAQLLSMRPDLRISSLRGNVDTRLRKLQNGEYDAIILASAGLNRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L+ E F P+ GQGA+ IE +N L+ + + T V+ ER FLA L+G
Sbjct: 180 APYMAPLDPERFLPAVGQGALGIECREDNYDLLVLLASLENRATRVCVDAERGFLAGLEG 239
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
C+ IAG A T+ G+V DG + +NGN DA
Sbjct: 240 GCQVPIAGHARLVDEETVSLKGLVAEVDGSLILRGEKNGNAADA 283
>gi|172061376|ref|YP_001809028.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6]
gi|171993893|gb|ACB64812.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6]
Length = 304
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 154/276 (55%), Gaps = 3/276 (1%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L
Sbjct: 16 PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGRADLAVHSLKDVPMALPD 75
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
G ++A + RED RD F+S+ SL L +V+GTSSLRR+A+L + V+ RG
Sbjct: 76 GFALTAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLRREAMLRARYPHLDVLPLRGN 135
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
++TRL KL+ AI+LA AG+KRL E I+ ++++ED PP+ GQGA+ IE +
Sbjct: 136 LDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPPAAGQGALGIEIAAHRTD 195
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ ++ T +V ER L GSC+ +A A + LY G V +DG+
Sbjct: 196 VAAWLAPLHDPKTALAVEAERMVSRALGGSCEVPLAAHAVWRAGELYLTGRVSTTDGQRV 255
Query: 274 HEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306
G DA+ +GR + + ++ N
Sbjct: 256 LTAEECGAVMTIADALALGRAVSDELEAQGALDIVN 291
>gi|83720099|ref|YP_441428.1| porphobilinogen deaminase [Burkholderia thailandensis E264]
gi|257139896|ref|ZP_05588158.1| porphobilinogen deaminase [Burkholderia thailandensis E264]
gi|123740194|sp|Q2T071|HEM3_BURTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83653924|gb|ABC37987.1| porphobilinogen deaminase, putative [Burkholderia thailandensis
E264]
Length = 329
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++ED P+ GQGA+ IE + ++ T +V ERA L GSC+
Sbjct: 194 LLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDG 276
>gi|218295973|ref|ZP_03496753.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23]
gi|218243711|gb|EED10239.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23]
Length = 303
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 155/295 (52%), Gaps = 18/295 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG-----KG 62
+GTR S LALA L + P + + T+GD GG +
Sbjct: 6 VGTRGSALALAQTRWVVERLKE--SWPEAEFKVKTIRTRGD----------GGADPREQA 53
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +E+++ L++ EID AVHS KD+PT+ KGL+I+A R+D RD F+ + L+DL
Sbjct: 54 IFVKELQEALLAREIDIAVHSLKDLPTEEPKGLKIAAIPRRQDPRDAFLGKAFKRLEDLP 113
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSS+RRKA +L R D+ V D RG ++TRL L + AI+LA AG+ RL
Sbjct: 114 PGAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGGGEYDAIILAAAGLIRLDLR 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L
Sbjct: 174 NRIDQFLEPEVMLPAPGQGALALEVRQGDDLAEELSYALHHHASHDRVRAERAFLRGLGA 233
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + + A + TL G + A DGK F G +A +G + A+ I
Sbjct: 234 GCLAPVGALAQVGEDGTLVLEGGIFAPDGKSFIRAEIEGEASEAEELGLELARDI 288
>gi|323525182|ref|YP_004227335.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001]
gi|323382184|gb|ADX54275.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001]
Length = 349
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 164/293 (55%), Gaps = 7/293 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF +
Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L G D AVHS KD+P +L G ++ + RED RD +S+ SL L +V
Sbjct: 72 ELEAALADGRADLAVHSLKDVPMELPAGFALATIMEREDPRDALVSNDYDSLAALPAGAV 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + I+
Sbjct: 132 VGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAERIR 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC+
Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSCEV 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYI 296
+A +A L+ G+V DG+ H + A+ +GR+ A +
Sbjct: 252 PLAAYATWHDGALHLRGVVATPDGQRVLSAHASAPAPTTERAVALGREVASAL 304
>gi|284053907|ref|ZP_06384117.1| porphobilinogen deaminase [Arthrospira platensis str. Paraca]
Length = 322
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 158/299 (52%), Gaps = 5/299 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RI +R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQ--KRFPDIKFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + +H + L
Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ E + GQGA+ IE + + E+VK + H T + ERAFL
Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGIECREGDTEILEVVKALEHTATAQRCHSERAFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK + + G DA +G + A ++
Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIELANQLK 304
>gi|298369901|ref|ZP_06981217.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281361|gb|EFI22850.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 311
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 159/273 (58%), Gaps = 2/273 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGTIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIASHRTDLLDVLKPLNHDITRACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
GSC+ +A + + L G+V DG +
Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVI 271
>gi|325133945|gb|EGC56601.1| porphobilinogen deaminase [Neisseria meningitidis M13399]
gi|325143900|gb|EGC66212.1| porphobilinogen deaminase [Neisseria meningitidis M01-240013]
gi|325206609|gb|ADZ02062.1| porphobilinogen deaminase [Neisseria meningitidis M04-240196]
Length = 311
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ + P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESESLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294
>gi|257452372|ref|ZP_05617671.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
gi|317058915|ref|ZP_07923400.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
gi|313684591|gb|EFS21426.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
Length = 299
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 165/298 (55%), Gaps = 6/298 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K+ +G+R S LALA + L H P + I + T+GD+ + ++
Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L
Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR
Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++++ + ER F
Sbjct: 179 VKLEEKITEYLDPTVFPPAPAQGALYIQCREEDIEVQKILQSIHNKNLEKVLVVEREFSK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
DG C + + ++ +G TL F+ + + + +V N ++ +I R AAQ I
Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHENKRYQTKVVENLSKGK--DIARMAAQKI 294
>gi|83282130|ref|XP_729634.1| porphobilinogen deaminase [Plasmodium yoelii yoelii str. 17XNL]
gi|23488022|gb|EAA21199.1| porphobilinogen deaminase, putative [Plasmodium yoelii yoelii]
Length = 583
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 181/339 (53%), Gaps = 49/339 (14%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITNRTLTEIGGK 61
K IGTR SPLA+ + + + L+ K NI +I P+ T GD+I ++T+ GGK
Sbjct: 71 KEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFGGK 130
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S ++L+D+
Sbjct: 131 GIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKNLRDI 190
Query: 122 ALHS-----------VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
L S I TSSLRR + + ++ + RG I TR+ KL NN +I+
Sbjct: 191 NLSSHVIDKEIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINTRIAKLFNNSFDSII 250
Query: 171 LAYAGIKRLKKEKVIKEIL--NIED--------------------------FPPSPGQGA 202
+A+ G++RL +K++++I+ NI+D P+ QG
Sbjct: 251 IAFCGLERLVSKKILRQIMKNNIKDKSYIINYKNISIDLRHLNIQKLNTNIMCPALCQGI 310
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262
I + ++ NNP+ +++K IN+E + N ERAFL ++DGSC I G+ + ++F
Sbjct: 311 IGVTSNKNNPEISQILKNINNEKSQIMANIERAFLQKIDGSCTMPIGGYTKFSKNKIFFN 370
Query: 263 GIVLASDG----KIFHEVSRNGNRCDAINIGRDAAQYIR 297
I+ +G KI +V R+ N D I +AA+ I+
Sbjct: 371 AIINDINGLENYKI--KVVRHLNDLDG--IADEAAEKIK 405
>gi|170078218|ref|YP_001734856.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002]
gi|169885887|gb|ACA99600.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002]
Length = 321
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 160/296 (54%), Gaps = 6/296 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RIG+R S LAL + R L + P + + T+GD++ + L++IG KG
Sbjct: 8 KRTVRIGSRKSQLALVQTYWVRDELQKAY--PEITFEVQTMETQGDKVLDVALSKIGDKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E ++ GE D AVHS KD+PT L +GL + R D D + H + L+
Sbjct: 66 LFTQELEDGMLKGETDFAVHSLKDLPTNLPEGLMLGCVTERVDPADALVVNEKHRDKKLE 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L SVIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 TLPSGSVIGTSSLRRLAQLRHHFPHLEFKDIRGNVNTRLAKLDRGEYDAIILAAAGLQRL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLA 238
I +I++ + + GQGA+ IE + + L++ V+ H ++ D ER+FL
Sbjct: 186 DFGDRIHQIISSDISLHAVGQGALGIECRDGDEEILGLLRPVLEHAESRDRCYAERSFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+L+G C+ I +G L G+V + DG+ +G+R DA +G + AQ
Sbjct: 246 QLEGGCQVPIGVNTTIEGDRLTLVGMVASLDGQTLIRDEVSGSRADAEKLGIELAQ 301
>gi|241766973|ref|ZP_04764769.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN]
gi|241362537|gb|EER58429.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN]
Length = 244
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 4/240 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L + H + ++ ++T+GD+I +R+L+++GGKGLF
Sbjct: 8 PLVIATRESRLALWQAEHVQALL----RARGHTVSLLGMTTQGDQILDRSLSKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G ++ + RED RD F+S SL+ L
Sbjct: 64 VKELEVALEEGRAHIAVHSLKDVPMELPEGFALACVMEREDPRDAFVSPRYASLEALPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL ++
Sbjct: 124 AVVGTSSLRRQVLLQALRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLQER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ P+ GQGA+ IE + E + + H++TW +V ERA + GSC
Sbjct: 184 IRTEFATTAMLPAAGQGALGIEIRSDRQDLIEALAPLAHQETWLTVTAERAVSRAMGGSC 243
>gi|73662403|ref|YP_301184.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123761533|sp|Q49YA2|HEM3_STAS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72494918|dbj|BAE18239.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 308
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 165/291 (56%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L + P I I + TKGD I ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSRQFIDKLKAID--PSLEIEIKEIVTKGDLIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L + ID A+HS KD+P+ + GL + RE+ D +I+ L +L +S++
Sbjct: 64 IQNELFNHGIDMAIHSLKDVPSVIPDGLTLGCIPDRENPYDAYIAKNHVPLNELPDNSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + ++
Sbjct: 124 GTSSLRRGAQILAKYPKLQIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ E P+ GQGA+ IE ++ L+ ++++D D V ER FL ++GSC+
Sbjct: 184 SYLDKETLIPAIGQGALGIECRSDDETLLSLLSKVHNQDVADCVTAERTFLTRMNGSCQV 243
Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I G+A + T+ F G++++ DGK ++ + G D + +G + + +
Sbjct: 244 PIGGYATKEADGTIEFTGLIMSPDGKERYQHTVRGT--DPVALGEEVTKVL 292
>gi|313901219|ref|ZP_07834707.1| hydroxymethylbilane synthase [Clostridium sp. HGF2]
gi|312954177|gb|EFR35857.1| hydroxymethylbilane synthase [Clostridium sp. HGF2]
Length = 299
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 153/277 (55%), Gaps = 2/277 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LALA E ++ L + P H+ I ++TKGDRI + L ++ KG+F
Sbjct: 3 IRMGTRGSALALAQCNEVKALLEKAY--PQHSFEICVITTKGDRIQHVALDQMKDKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++L+ ID AVHS KDMP+ L + L + L RED RDV + A SL+ L LH+
Sbjct: 61 KEIEQQLLEHTIDLAVHSMKDMPSVLDERLCFTETLLREDARDVLVLRNAASLESLPLHA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I T S RR+ LLR R D+ ++ RG IETRL KL + + I+LA AG+KRL+ + I
Sbjct: 121 RIATGSKRRRFQLLRQREDLEIVGIRGNIETRLKKLEDQQLDGIVLAAAGLKRLQLAQYI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ QGAI IE H ELV + + + V ERAFL EL+G C
Sbjct: 181 TQTLPEHIMVPAVAQGAIAIEVHKKRNDLVELVNALCTKRVDEEVCAERAFLQELNGGCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ + + + + + DG ++ +G R
Sbjct: 241 TPLGARCILHEADAELFAVYGSEDGTRLFDLHVSGPR 277
>gi|92115224|ref|YP_575152.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043]
gi|91798314|gb|ABE60453.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043]
Length = 311
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 149/267 (55%), Gaps = 4/267 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A ++ L+ +H P + ++ ++T+GD+I + L ++GGKGLF
Sbjct: 4 LRIATRQSRLALWQAEHVKARLLALH--PGLEVELVAMTTRGDKILDSPLAKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G D AVHS KD+P +GL +S L D F+S+ SL L
Sbjct: 62 KELEEALLDGRADIAVHSMKDVPMHFPEGLGLSVILESGAPTDAFVSNDYASLDALPEGV 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR + R D+ V++ RG ++TRL KL+ + AI+LA +G++RL+ I
Sbjct: 122 RVGTSSLRRGLQVKEARPDLEVLNLRGNVQTRLGKLDGGEFEAIILATSGLQRLELGHRI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE ++ EL+ ++H T V ERA LDG C+
Sbjct: 182 TQELPPEVSLPACGQGALGIECRHDDESLLELLAPLDHPQTATRVRAERAMNTRLDGGCQ 241
Query: 246 SAIAGFAYCKGS--TLYFYGIVLASDG 270
I G+A + TL+ +V DG
Sbjct: 242 VPIGGYAVLEDGDRTLWLRALVGDPDG 268
>gi|300866645|ref|ZP_07111332.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506]
gi|300335354|emb|CBN56492.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506]
Length = 323
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 158/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL
Sbjct: 10 RTVRIGSRKSQLALVQTYWVQEQLQ--QRFPQCTFEVHTMSTQGDKILDVPLAKIGDKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E ++S E D AVHS KD+PT L +GL + RE+ D + +H + L+
Sbjct: 68 FTKELEVGMLSNETDFAVHSLKDLPTNLPEGLILGCVSERENPADALVVHANHQDKQLET 127
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 128 LPPGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLAKLDEGEYDAIILAVAGLQRLG 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +I++ E + GQGA+ IE + EL+K + H +T ERAFL EL
Sbjct: 188 MGDRVHQIISPEISLHAVGQGALGIECRAGDDDILELIKALEHTETAQRCYAERAFLREL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I +G L G+V + DG+ + + G A +G D A +R
Sbjct: 248 EGGCQVPIGVNTKIEGDQLTLTGLVASLDGQRLIKDTVTGAAATAELLGIDLAHRLR 304
>gi|167618302|ref|ZP_02386933.1| porphobilinogen deaminase [Burkholderia thailandensis Bt4]
Length = 278
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMELPTGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++ED P+ GQGA+ IE + ++ T +V ERA L GSC+
Sbjct: 194 LLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDG 276
>gi|319792195|ref|YP_004153835.1| porphobilinogen deaminase [Variovorax paradoxus EPS]
gi|315594658|gb|ADU35724.1| porphobilinogen deaminase [Variovorax paradoxus EPS]
Length = 308
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 140/248 (56%), Gaps = 4/248 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF +E
Sbjct: 13 IATRESRLALWQAEHVQALLQERG----HTVSLLGMTTRGDQILDKSLSKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G D AVHS KD+P L +G ++ L RED RD +S SL +L +V+
Sbjct: 69 LETAIEDGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDAMVSPRYASLDELPHGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E I+
Sbjct: 129 GTSSLRRVVLLKARRPDVRIEPLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLEDRIRV 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+D P+ GQGA+ IE + EL+ + H W S ERA + GSC
Sbjct: 189 AFEPDDMLPAAGQGALGIEVRADREDLIELLAPLAHRGDWLSTAAERAVSRAMGGSCSMP 248
Query: 248 IAGFAYCK 255
+A A +
Sbjct: 249 LAAHARWQ 256
>gi|332531340|ref|ZP_08407248.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624]
gi|332039204|gb|EGI75622.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624]
Length = 323
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 151/269 (56%), Gaps = 19/269 (7%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A + L + H + ++ ++T+GD+I +R L+++GGKGLF +E
Sbjct: 7 IATRESRLALWQAEHVQGLL----RQQGHAVTLLGMTTQGDQILDRALSKVGGKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G ++A L RED RD ++S L DL +++
Sbjct: 63 LEVALDEGRADLAVHSLKDVPMELPEGFVLAAVLEREDERDAWVSPHCAGLADLPSGAIV 122
Query: 128 GTSSLRRKALL---LR--WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
GTSSLRR LL LR R D+ + RG ++TRL KL+ + HAI+LA AG+KRL
Sbjct: 123 GTSSLRRVVLLREALRALGRDDVRIEPLRGNLDTRLRKLDEGQYHAIVLAAAGLKRLGLA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVIN---HEDTWDSVNCERAFLA 238
I++I E+ P+ GQGA+ IE H + L + ++ H+ TW V ERA
Sbjct: 183 ARIRKIFTPEEMLPAAGQGALGIEIKHGATAQTAALEQALSNLAHQPTWLRVAAERAVSR 242
Query: 239 ELDGSCKSAIAGFA------YCKGSTLYF 261
+ GSC +A A KG+TL
Sbjct: 243 AMGGSCSMPLAAHAAFVSSPAPKGATLRL 271
>gi|119511003|ref|ZP_01630124.1| porphobilinogen deaminase [Nodularia spumigena CCY9414]
gi|119464348|gb|EAW45264.1| porphobilinogen deaminase [Nodularia spumigena CCY9414]
Length = 323
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 158/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + R L P + + +ST+GD I + L +IG KGL
Sbjct: 10 RTIRIGSRKSQLALVQTYWVRDQLQ--KSFPDISFEVHTMSTQGDNILDVALAKIGDKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
FT+E+E +++ EID AVHS KD+PT L GL ++ RE+ D + H + ++
Sbjct: 68 FTKELEVGMLNQEIDFAVHSLKDLPTNLPSGLTLAVITERENPADALVVHDKYKDKQIET 127
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL++ + A++LA AG++RL
Sbjct: 128 LPAGAVIGTSSLRRLAQLRNKFPHFTFKDVRGNLNTRLKKLDSGEYDALILAAAGLERLG 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL E + GQGA+ IE ++ + ++K I H +T D ERAFL L
Sbjct: 188 MSDRIHQILPKEISLHAVGQGALGIECRADDKEIINILKAIEHSETRDRCLAERAFLRIL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I G L GIV + DG+ + + G DA +G + A +R
Sbjct: 248 EGGCQVPIGVNTVIDGDNLTLTGIVASVDGQKLVKDTVTGAAKDAEKLGAELAALLR 304
>gi|167746868|ref|ZP_02418995.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662]
gi|167653828|gb|EDR97957.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662]
Length = 292
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 161/298 (54%), Gaps = 8/298 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIG 59
ME K RIG+R S LA+A +TR + + P + ++ L T GD+I N+TL +IG
Sbjct: 1 MEPKRLRIGSRESLLAVA---QTRLVIEQLKANYPELSFELVTLKTTGDKILNKTLDKIG 57
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ +
Sbjct: 58 GKGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFE 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ VIG+SS RR + R + RG I TRL KL+ + ++++A AG+KR
Sbjct: 118 EFG--QVIGSSSARRVLQVRRLFPEAEFQSIRGNIHTRLRKLDKGQYSSLIMAAAGLKRA 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ I ++E+ P+ GQG +C++ V Q L I+ +T ER+F+
Sbjct: 176 GLKERISRYFSVEEMLPAAGQGTLCVQ--VRKDFDQSLFSCIHDRETELVTEAERSFVRA 233
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
LDG C S IA +A GS L G+ + ++S G DA +GR A+ I+
Sbjct: 234 LDGGCSSPIAAYAEITGSDLCLTGLYYNAADNTGRKMSITGKAQDAGGLGRRLAEQIQ 291
>gi|311031438|ref|ZP_07709528.1| porphobilinogen deaminase [Bacillus sp. m3-13]
Length = 310
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 167/301 (55%), Gaps = 6/301 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL L + P + + + TKGD+I + TL+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQTNWVIDQLKALG--APFDFEVKEIVTKGDQILDVTLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ ++ +ID AVHS KDMP L +GL I RED RD FIS DL S++
Sbjct: 64 IEQAMLDKDIDMAVHSMKDMPAVLPEGLTIGCIPFREDHRDAFISKDHVKFADLPSGSIV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIK 186
GTSSLRR A LL R D+ + RG I+TRL KL N AI+LA AG+ R+ K V+
Sbjct: 124 GTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLQNEDYDAIILAAAGLARMGWSKDVVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E L+ + P+ GQGA+ IE ++ E++K+ T +V ERAFL +++G C+
Sbjct: 184 EFLDEDLCLPAVGQGALSIECREDDADLLEVLKLFTDSVTEKAVIAERAFLHKMEGGCQV 243
Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAGFA + L +V A DG + ++ G D + +G +AA+ + K +
Sbjct: 244 PIAGFASVGQDDNLTLTVLVGAPDGSVLYKERITGT--DPVKVGLEAAESLTAQGGKKII 301
Query: 306 N 306
+
Sbjct: 302 D 302
>gi|122842|sp|P13446|HEM3_EUGGR RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|18412|emb|CAA33759.1| unnamed protein product [Euglena gracilis]
Length = 480
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 154/275 (56%), Gaps = 9/275 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+ TR SPLA+ A +S L + P + + P+ST+GD+I + L ++GGKGL
Sbjct: 150 KTVRVATRKSPLAMWQAEFIQSELERLW--PGITVELQPMSTRGDKILDSPLAKVGGKGL 207
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
F +E+E L+ D AVHS KD+P +L +GL + R D D + +SL+D
Sbjct: 208 FVKELETALLENRSDIAVHSTKDVPMELPEGLVLGVICKRHDPCDAIVFPKGSNLKSLED 267
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ LL R D+ ++ RG + TRL KL++ AI+LA AG+KRL
Sbjct: 268 LPHGARVGTSSLRRQCQLLLKRPDLKFLELRGNVNTRLAKLDSGDYDAIILAAAGLKRLG 327
Query: 181 -KEKVIKEILNIED---FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
++V+ NI D P+ GQGA+ IE N+P+ L++ ++H +V CERA
Sbjct: 328 FSDRVLPGETNIIDPNVMCPAAGQGALSIELRTNDPEIAALLEPLHHIPDAVTVACERAM 387
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
L+G C+ I+GFA K L V + GK
Sbjct: 388 NRRLNGGCQVPISGFAQLKDGQLRMEARVGSVTGK 422
>gi|150016167|ref|YP_001308421.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052]
gi|254800241|sp|A6LSY5|HEM3_CLOB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|149902632|gb|ABR33465.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052]
Length = 291
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 160/291 (54%), Gaps = 10/291 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA SL D I ++I+ T+GDR + +L +IGGKGLF ++
Sbjct: 6 IATRKSKLAQTQTEIIMKSLKDKFNIDSEKMLIV---TEGDRKLDVSLAKIGGKGLFVKD 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L+ D AVHS KD+P +L +I+A REDIRDV IS K+L ++I
Sbjct: 63 IEIALLEKRADGAVHSMKDVPYELSHEFEIAAITEREDIRDVLISKDNIPFKELRKGAII 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR L R+D+ ++ RG ++TRL K+ I+LA AG+KRL +E +I E
Sbjct: 123 GTSSIRRACQLKLMRNDLDIVPIRGNVQTRLEKMKEQNLDGIILASAGLKRLNEEDIITE 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + F P+ QGA+ IE + A++ + + + +V ER+F+ L+G C S
Sbjct: 183 YFDPKVFIPAVAQGALGIEC-LKTSSAKKYFEKMEDSNAKLTVEAERSFMRMLNGDCHSL 241
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--GNRCDAINIGRDAAQYI 296
I ++ +G+ LY GI G+I V ++ G++ D I +GR A I
Sbjct: 242 IGAYSEIQGNDLYMIGIYDIG-GRI---VKKDILGDKNDHIELGRKLANKI 288
>gi|325661929|ref|ZP_08150549.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471781|gb|EGC74999.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 292
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 148/267 (55%), Gaps = 7/267 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGKG
Sbjct: 2 KRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + A+ ++
Sbjct: 60 LFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLVP--AKGKENWN 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL E
Sbjct: 118 GQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LDG
Sbjct: 178 ERIERYFSPEEILPAAGQGILVVQ---GREEMRELVKELQPEEMEVIAENERAFVRRLDG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASD 269
C S +A + + L G+ D
Sbjct: 235 GCSSPVAAYGRIQQDELVLTGLYYEED 261
>gi|295675858|ref|YP_003604382.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002]
gi|295435701|gb|ADG14871.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002]
Length = 332
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 153/265 (57%), Gaps = 4/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF +
Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L +V
Sbjct: 72 ELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNQYDSLAALPAGAV 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 132 VGTSSLRREAMLRMRYPHLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLADRIR 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC+
Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSCEV 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
+A +A L+ GIV DG+
Sbjct: 252 PLAAYATWGDGALHLRGIVATPDGQ 276
>gi|329764682|ref|ZP_08256278.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138828|gb|EGG43068.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 308
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 162/290 (55%), Gaps = 6/290 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IG R S L+LA +T+ + ++ KI P + I + TKGD R L I KG+F +
Sbjct: 2 IGARGSQLSLA---QTKLVISELKKITPDVDFEIKSIKTKGD-TDARPLFTIDQKGIFEK 57
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EI++ + GE+D AVHS KD+P++L++ L +++ RE + D+FIS +L + +V
Sbjct: 58 EIDRAVADGEVDFAVHSLKDVPSQLVENLTLASIPKREMVNDIFISSDGTTLDSIKSGAV 117
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSSLRR + R RSD++V RG IETR+ K+ + I+LA AGI RL + V
Sbjct: 118 IGTSSLRRAVQITRKRSDVTVRPIRGNIETRIKKVTDKIFDGIVLAQAGISRLGID-VQY 176
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+I+DF PSPGQGA+ I + + ++K I D+ + ER+ +D C+
Sbjct: 177 TPLSIQDFSPSPGQGALAIVSRKDESSTISMLKKIEDTDSRLEIEAERSLSDFVDSGCRF 236
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I +A G+ + + DGK V ++G++ D ++G+ + +
Sbjct: 237 PIGAYAKSNGNQMTLSVSAFSVDGKKSLFVEKSGDKNDPFSLGKSVGEEL 286
>gi|119897284|ref|YP_932497.1| porphobilinogen deaminase [Azoarcus sp. BH72]
gi|119669697|emb|CAL93610.1| hydroxymethylbilane synthase [Azoarcus sp. BH72]
Length = 316
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 148/274 (54%), Gaps = 2/274 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF +E
Sbjct: 17 IATRESRLALWQAEHVKARLEALY--PACTVELLGMTTRGDQILDRPLAKVGGKGLFVKE 74
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P ++ K + RE D F+S+ SL D+ +V+
Sbjct: 75 LETALLDGRADIAVHSMKDVPMEMGKAFALPCISAREVPLDAFVSNRYASLADMPPGTVV 134
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG+ RL I+
Sbjct: 135 GTSSLRRESQLHAQYPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLADRIRA 194
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L E P+ GQGA+ IE + P+ + +N T V ERA L GSC+
Sbjct: 195 TLPAEVSLPAAGQGALGIECLSSRPEVAAWLAPLNDPATSACVRAERAVARALAGSCEVP 254
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
+ +A +G+ L+ G V DG R G+
Sbjct: 255 LGAYAELRGARLWLRGFVARPDGSEIVRAEREGD 288
>gi|168188066|ref|ZP_02622701.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund]
gi|169294098|gb|EDS76231.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund]
Length = 300
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 159/293 (54%), Gaps = 6/293 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + + P + +STKGDRI + L +IG KGLF +E
Sbjct: 5 VGSRGSKLALTQTNWIINEIKQNY--PQIQFEVKIISTKGDRIQHIALDKIGDKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHSV 126
IE++LISGEID AVHS KDM T + + L+ S RED RDV I + S+ +L +++
Sbjct: 63 IEEQLISGEIDMAVHSMKDMSTDIPEELKFSYVPKREDYRDVLILNKKYNSIDELPMNAR 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185
IGT S RR+ LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL +EK+
Sbjct: 123 IGTGSKRRRYQLLQYRDDLNIVPIRGNVETRINKIETENLHGVVLAVAGIKRLNIEEKLD 182
Query: 186 KEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I LN PSP QG + +E + ++++K I ++ ERAFL ++G
Sbjct: 183 YNIFYLNENIMLPSPAQGILALEIKKHREDLEKILKSIEDRNSTIQAIAERAFLKGVNGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C I + G++ DG S G DA IG + A+ +
Sbjct: 243 CHVPIGAICNINKDNIEVTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIV 295
>gi|51473654|ref|YP_067411.1| porphobilinogen deaminase [Rickettsia typhi str. Wilmington]
gi|55976371|sp|Q68WR3|HEM3_RICTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51459966|gb|AAU03929.1| Porphobilinogen deaminase [Rickettsia typhi str. Wilmington]
Length = 299
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 146/249 (58%), Gaps = 5/249 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL +T + + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRNSTLAL---IQTNLVIAQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L+ +ID AVHS KD+P ++ L I+A L RED RDV + +S++ L +
Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDIPGRIPVDLVIAAVLEREDPRDVLVCLNYKSIETLPQN 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183
+VIG+S++RRKA + + R D+++ FRG +++R+ KL + A +L+YAG+KRL K
Sbjct: 122 AVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDATILSYAGLKRLNAFNK 181
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ P GQG I +E ++ + INH T++ + ERAFL LD +
Sbjct: 182 KYCHLIEYSQILPCVGQGVIAVEIRKDDNAMFNICNQINHIPTFELIKPERAFLEHLDAN 241
Query: 244 CKSAIAGFA 252
C + I ++
Sbjct: 242 CSTPIGAYS 250
>gi|331085795|ref|ZP_08334878.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406718|gb|EGG86223.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 292
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 148/267 (55%), Gaps = 7/267 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGKG
Sbjct: 2 KRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + A+ ++
Sbjct: 60 LFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLVP--AKGKENWN 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL E
Sbjct: 118 GQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LDG
Sbjct: 178 ERIERYFSPEEILPAAGQGILVVQ---GREEMRELVKKLQPEEMEVIAENERAFVRRLDG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASD 269
C S +A + + L G+ D
Sbjct: 235 GCSSPVAAYGRIEQDELVLTGLYYEED 261
>gi|322435837|ref|YP_004218049.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9]
gi|321163564|gb|ADW69269.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9]
Length = 318
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 19/307 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE---IGGKG 62
RIG+R S LAL A + L H H + I + T GDR+ + GKG
Sbjct: 4 IRIGSRGSQLALWQANHIAAELR-AHG---HQVEIEVIRTTGDRMQQPGFVPPPGLDGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+ G ID AVHS KD+PT + I+A PR D RD F+ +L L
Sbjct: 60 IFIKEIEDALLDGRIDLAVHSYKDLPTTIDPRFTIAAVPPRADARDAFVCEPYWALHTLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IGT+S RR+A LL R D++ ++ RG I+TRL KL A++LA AG+ R+ +
Sbjct: 120 HAGRIGTTSPRRRAQLLALRPDLTFVELRGNIDTRLRKLEEGACDALVLACAGLDRIART 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETH-----------VNNPKAQELVKVINHEDTWDSVN 231
+ + + ++++ P+PGQGA+ +ET +P + ++ + H +T + +
Sbjct: 180 ESVHQRFDVDELTPAPGQGALALETRSPAHALDTEDPTRDPAIYKAIRALEHPETRFATD 239
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-AINIGR 290
ERAFLAE+ G C+ + Y VL+ DG+ + + + + + A +G+
Sbjct: 240 AERAFLAEMGGGCELPLGAHCLSTSGVYRLYAQVLSPDGEYMVQTTLDRHPEEPAAALGQ 299
Query: 291 DAAQYIR 297
AA+ ++
Sbjct: 300 RAAEILK 306
>gi|168703144|ref|ZP_02735421.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246]
Length = 299
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 145/267 (54%), Gaps = 2/267 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P ++GTR SPLAL A L V + P + ++ + T GDR L+ +GG G+F
Sbjct: 4 PLKLGTRGSPLALWQANYIAELLRPV--VAPRPVELVLIETHGDRDQASALSAMGGFGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ I+ L+ G D AVHS KD+PT L+++A PR D F+S + DL
Sbjct: 62 TKAIQNALLDGRADVAVHSLKDLPTIPEPRLELAAVPPRGPTGDAFVSRKHKRFDDLHPG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A +L R D+ ++D RG ++TRL KL++ AI+LA AG+ RL
Sbjct: 122 ATVGTSSLRRRAQVLNRRPDLKLLDLRGNVDTRLRKLDDLGLDAIVLAEAGLARLGLADR 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I EIL+ P+ GQGAI +E ++ + + ++ + E T+ V ERA L L G C
Sbjct: 182 ITEILDPSWMLPAVGQGAIGLECRSDDGETKLVLAQVRCESTFARVQAERAMLYALGGGC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK 271
I + L G VL+ DG+
Sbjct: 242 LVPIGATSKVLDGVLTVRGAVLSPDGR 268
>gi|87306341|ref|ZP_01088488.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645]
gi|87290520|gb|EAQ82407.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645]
Length = 308
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 160/304 (52%), Gaps = 7/304 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A L V ++ II ++T+GD +T L IGG+G+FT
Sbjct: 4 IRIGTRGSQLAQWQANWVADQLRAVGT----DVEIIHIATQGD-VTQGPLDLIGGRGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ L+ ID AVHS KD+PT+ + GL+++A R DV I+ A + L S
Sbjct: 59 TEIQAALLDNRIDVAVHSLKDLPTEAVVGLRLAAVPARGADGDVLITSKASDVLGLPQES 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGT S+RRKA LL R D + D RG ++TRL KL++ AI+LA AG++RL+ + I
Sbjct: 119 IIGTGSMRRKAQLLHLRRDFQIRDIRGNLDTRLRKLDDGLYDAIILAEAGLRRLELIERI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ GQGA+ +E + ++ +NHED+ SV ER+ L L G C
Sbjct: 179 RHVIPKAQMLPAVGQGALGLEIRERDSATAAMLAPLNHEDSHYSVLAERSMLRNLRGGCL 238
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ + + L+ G+V++ DG S G A +IGR A + +
Sbjct: 239 APVGAWGRIDPIKQLLFLDGVVVSGDGHHKVTASACGPPNRAEDIGRQVADQLAIQGAER 298
Query: 304 VFNF 307
+ F
Sbjct: 299 LIAF 302
>gi|226354974|ref|YP_002784714.1| porphobilinogen deaminase [Deinococcus deserti VCD115]
gi|259647793|sp|C1CYD9|HEM3_DEIDV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226316964|gb|ACO44960.1| putative Porphobilinogen deaminase (PBG) (Hydroxymethylbilane
synthase) (HMBS) (Pre-uroporphyrinogen synthase)
[Deinococcus deserti VCD115]
Length = 311
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 155/293 (52%), Gaps = 11/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR----TLTEIGGKGL 63
+GTR S LALA + L + + P + I +STKGDR NR + + G KG
Sbjct: 6 VGTRGSTLALAQTRWVVARLKE--EWPDTDFRIQTISTKGDR--NRESLEAMAQKGDKGF 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
+ +EIE L+ ID AVHS KD+PT+ +GL++++ R D RDV I + L DL
Sbjct: 62 WVKEIEDALLQKRIDIAVHSLKDLPTEQPEGLEVASIPKRVDARDVLIGKEGMKRLADLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSS+RRKA L +R D+ VID RG I+TRL L ++ AI+LA AG+ R +
Sbjct: 122 QGARVGTSSVRRKAFLRAYRPDLQVIDLRGNIDTRLAALAGDEYDAIILAAAGLIRTEMR 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E + + P+PGQGA+ +ET N E+ I+ T D + ER FLA L
Sbjct: 182 HRIDEFVEPDILLPAPGQGALALETRSGPENDLTIEVAYAIHDHGTDDRITAEREFLAGL 241
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + + A KG L G V A DG + G+ + +IG + A
Sbjct: 242 GAGCMAPVGAHASIKGGVLTLEGWVGALDGSKVIRATSIGDPAECADIGAELA 294
>gi|124268186|ref|YP_001022190.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1]
gi|124260961|gb|ABM95955.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1]
Length = 317
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 148/256 (57%), Gaps = 7/256 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ + I TR S LAL A R+ L+ + P + ++ ++T+GD+I +RTL+++GGKGL
Sbjct: 6 QAWVIATRESRLALWQAEHVRA-LLGSRLVEP--VELLGMTTRGDQILDRTLSKVGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L +G+ AVHS KD+P L G ++A L RED RD ++S L L
Sbjct: 63 FVKELETALEAGDAHLAVHSLKDVPMDLPAGFVLAAVLEREDPRDAWVSPRYADLAALPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR + L R D+ + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 123 GAVVGTSSLRRLSQLRARRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAE 239
I+ + + P+ GQGA+ IE + P+ ++ + HE +W +V+ ERA
Sbjct: 183 RIRSVFEADAMIPAAGQGALGIELRADAPERHPALWAALRALTHEPSWLAVHAERAVSRA 242
Query: 240 LDGSCKSAIAGFAYCK 255
L GSC +A A +
Sbjct: 243 LGGSCSMPLAAHAQWQ 258
>gi|262199948|ref|YP_003271157.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365]
gi|262083295|gb|ACY19264.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365]
Length = 320
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 166/317 (52%), Gaps = 13/317 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ I TR S LAL A R + V P + ++ + T+GD+I + L++IGG
Sbjct: 1 MSERTIHISTRGSQLALWQAHHVRDEIRRVR--PAWQVELVIIKTQGDKILDVPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ G D AVHS KD+P +L GL ++A RED D + + L +
Sbjct: 59 KALFVKEIEQALLDGRADVAVHSMKDVPAELAPGLFMAATSRREDPYDALCTRDGRGLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA + +GTSSLRR+ +L R D+ + RG + TRL KL++ A++LA AG+KRL
Sbjct: 119 LAEGATLGTSSLRRQCQILARRPDLRIEMLRGNVPTRLGKLDDGSFDAVILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVIN---HEDTWD-SVNCERA 235
+ I + L+ P+ GQG + IET + P +ELV+ + H+ + V ERA
Sbjct: 179 HGERISQRLDGGVCVPAVGQGVLGIETRQGDAPADRELVEALREALHDPAEERRVVAERA 238
Query: 236 FLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A L GSC++ +A A +G TL G+ DG G DA +G
Sbjct: 239 MMAALGGSCQTPLAAHASYRGDSDPVAGTLVIEGLCGRPDGSEILRAQVEGRAEDAQALG 298
Query: 290 RDAAQYIRFISNKNVFN 306
A+ +R + + +
Sbjct: 299 SSLAEELRGQGAQAIID 315
>gi|15807343|ref|NP_296073.1| porphobilinogen deaminase [Deinococcus radiodurans R1]
gi|11386849|sp|Q9RRY0|HEM3_DEIRA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|6460165|gb|AAF11898.1|AE002066_2 porphobilinogen deaminase [Deinococcus radiodurans R1]
Length = 309
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 157/291 (53%), Gaps = 9/291 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR----TLTEIGGKGL 63
+GTR S LALA + L + + P + I +STKGDR NR L + G KG
Sbjct: 6 VGTRGSTLALAQTRWVVARLKE--EWPETDFRIQTISTKGDR--NRESLEQLAQKGDKGF 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
+ +EIE+ L++ +ID AVHS KD+PT+ +GL+IS+ R D RD I + L +L
Sbjct: 62 WVKEIEEALLAKKIDIAVHSLKDLPTEQPEGLEISSIPKRVDGRDALIGREGMKKLAELP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSS+RRKA L +R D+ V D RG I+TRL L + + AI+LA AG+ R ++
Sbjct: 122 EGARIGTSSVRRKAFLRAYRPDLIVKDLRGNIDTRLAALGSGEYDAIILAAAGLIRTEQR 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E ++ + P+PGQGA+ +ET + E+ I+ T D + ER FLA L
Sbjct: 182 HRIDEFVDPDILLPAPGQGALALETRTEDDLTIEVAYAIHDHATDDRITAEREFLAGLGA 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + + A K L G V A DG + G+ + +IG + A
Sbjct: 242 GCMAPVGAHAVIKNGLLTLEGWVGALDGTQVIRATSQGDVAECADIGAELA 292
>gi|256828337|ref|YP_003157065.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028]
gi|256577513|gb|ACU88649.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028]
Length = 311
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 145/260 (55%), Gaps = 2/260 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A L + P + + + TKGD+I + L +IGGKGLF
Sbjct: 4 IRIATRGSKLALWQAHHISGLLR--AQYPGMTVELNIIKTKGDKILDVPLAKIGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++ E D AVHS KD+P +L +GL++ RE D F+S + L +
Sbjct: 62 KEIEEALLADEADIAVHSMKDVPAQLPEGLKLGIIPEREQPTDSFLSVNYPDIASLPAGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L+ R D+ ++ RG ++TR+ KL + AI++A AG+ RL+
Sbjct: 122 RVGTSSLRRQTQLMGLRRDLCILSLRGNLDTRVGKLMAGEFDAIIVATAGMNRLELSAPH 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L F P+ QGA+ IE + P+ EL+ ++H + V ER+FL LDG C+
Sbjct: 182 MQELAPPMFYPAVAQGALGIEYRADRPQLDELLAFLDHAPSKICVEAERSFLFGLDGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIV 265
IAG+A G+ + G+V
Sbjct: 242 VPIAGYATLSGTEITLTGLV 261
>gi|22299189|ref|NP_682436.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1]
gi|39931549|sp|Q8DIE4|HEM3_THEEB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|22295371|dbj|BAC09198.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1]
Length = 320
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 157/297 (52%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIG+R S LAL ++ L H+ ++ ++T+GD I + L +IG KGL
Sbjct: 7 RPVRIGSRKSQLALVQTEWVQAQLQTHHR--DRAFEVVTMTTQGDNILDVALAKIGDKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E ++ GE D AVHS KD+PT+L GL ++A RED D + T ++
Sbjct: 65 FTKELELSMLRGETDLAVHSLKDLPTQLPDGLVLAAITEREDPADALVLGAKWTGHTIDT 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++RL
Sbjct: 125 LPEGTVIGTSSLRRLAQLRHYYPHLTFKDVRGNLNTRLAKLDAGEYDALILAVAGLRRLG 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I ++L + GQGA+ IE + LVK + H +T ERAFL +L
Sbjct: 185 FGDRISQVLPATVSLYAVGQGALGIECRAEDADILALVKTLEHPETTARCLAERAFLRQL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I + L G+V + DG+ + S G+ A +G A +R
Sbjct: 245 EGGCQVPIGVHTVIENGQLTLTGLVASLDGQRLVKDSLTGDVATAEELGTRLALKLR 301
>gi|78777061|ref|YP_393376.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251]
gi|123727562|sp|Q30S90|HEM3_SULDN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78497601|gb|ABB44141.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251]
Length = 313
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 169/297 (56%), Gaps = 7/297 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + ++ L + + P + + + T GDRI ++ L++IGGKGL
Sbjct: 2 KKLVIATRGSQLALWQSNHIKAILQEQN--PGLEVELNVIVTTGDRIQDKALSKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++ GE AVHS KD+PT + GL ++A RED RD +S ++ L
Sbjct: 60 FLKELEEAMLQGEAQIAVHSLKDVPTVMPDGLILAAITEREDSRDALLSEKYANIDALPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++V+GTSSLRR+ + + R D+ + D RG ++TR+ KL + AI+LA AGI RL
Sbjct: 120 NAVVGTSSLRRRMQIQKLRPDLIIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLSLLD 179
Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K + +++E+ PS GQGA+ IE VN+ + +V + E + ER+F+ EL+
Sbjct: 180 AVKHVYPISLEEMVPSMGQGALGIEA-VNDAEVLRIVAGLEDEYSRIETTIERSFVDELE 238
Query: 242 GSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYI 296
G C+ I + T+ ++ +G+ S+ ++ D NIGR+ AA++I
Sbjct: 239 GGCQVPIGVNASVLDDGTISIRAVLGLPNGEEMLSDSKITSKKDYENIGREIAAEFI 295
>gi|51244454|ref|YP_064338.1| porphobilinogen deaminase [Desulfotalea psychrophila LSv54]
gi|50875491|emb|CAG35331.1| probable porphobilinogen deaminase [Desulfotalea psychrophila
LSv54]
Length = 313
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 159/297 (53%), Gaps = 7/297 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IG+R S LA+ L + I + TKGD+I +R++ +IG KG
Sbjct: 2 KNIINIGSRKSKLAMWQTNTIAGQL----EAAGMETRINSMETKGDKILDRSIVKIGSKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDL 121
+FTEE+E +L +G D AVHSAKDM ++L + ++ A+ RE + DV +S + L D
Sbjct: 58 VFTEELEVQLATGITDIAVHSAKDMQSQLPEDFELIAFSQREKVNDVLVSDDKEIDLADP 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
IGTSS+RR+A+L ++ + ++ RG ++TR+ K+ N A++LAYAG+KR++
Sbjct: 118 TKKIRIGTSSVRRRAMLKQYYPHVQAVEMRGNLQTRIEKMRNGDCDALMLAYAGVKRMEN 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKV-INHEDTWDSVNCERAFLAE 239
+ +I + F P GQG I IE N +P +E ++ +N D+ + ERA+L +
Sbjct: 178 DDMIVMEFDTARFTPPVGQGCIAIEAATNLDPARREAIRTALNDADSESCLLAERAYLKK 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L+G C G A +G L + + DG NR +A +G + +YI
Sbjct: 238 LEGGCSIPAFGLACLEGEELVMRAGLSSLDGTRILVKEVRANRSEAETLGNNLGEYI 294
>gi|167580196|ref|ZP_02373070.1| porphobilinogen deaminase [Burkholderia thailandensis TXDOH]
Length = 286
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L++ED P+ GQGA+ IE + ++ T +V ERA L G+C+
Sbjct: 194 LLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHPTALAVEAERAVSRALGGNCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDG 276
>gi|253995539|ref|YP_003047603.1| porphobilinogen deaminase [Methylotenera mobilis JLW8]
gi|253982218|gb|ACT47076.1| porphobilinogen deaminase [Methylotenera mobilis JLW8]
Length = 313
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 161/293 (54%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGL
Sbjct: 11 KKLVIASRESALAMWQARHIQSRLQALY--PETEVTILGMTTTGDQILDTPLAKVGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L G D AVHS KD+P L +G ++A RED RD F+S+ +L+DL
Sbjct: 69 FVKELEIALADGRADLAVHSMKDVPMNLPEGFILAATGEREDPRDAFVSNDYATLEDLPA 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL+
Sbjct: 129 NSIVGTSSLRRQSQLQARFPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLELGN 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I++ + E P+ GQGA+ IE + P + +NH DT V ER L GS
Sbjct: 189 RIRQFIAPEHSIPAVGQGALGIEISADRPDLIATLAPLNHPDTQVCVEAERGMSRSLAGS 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + +A C+ ++ G V + DGK + G+R +A +G+ A +
Sbjct: 249 CTVPLGAYAVCEADSIRITGFVASVDGKQMLIETAVGSRANAEALGKTLASQL 301
>gi|118474504|ref|YP_891866.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40]
gi|158512506|sp|A0RNT3|HEM3_CAMFF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118413730|gb|ABK82150.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40]
Length = 303
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 6/265 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LAL R L+ H++ II + TKGD I + L +IGGKGLFT
Sbjct: 3 IKIASRNSALALWQTHHIRDLLI----AQGHSVEIITMKTKGDVILDTPLAKIGGKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G D AVHS KD+PT GL+++ RED+RD +S ++L +L +
Sbjct: 59 KELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDAMLSMKYKNLDELPQGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRRK +L R+D+ +I RG + +R+ KL N + AI+LA AGI RL K +
Sbjct: 119 KVGTTSLRRKMQILAHRADLDIISLRGNVNSRIAKLKNGEFDAIILAMAGINRLNLSKEV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K I D P+ GQGA+ IE ++ + + ++ +N E + ER F+ L+G C+
Sbjct: 179 KFTSAI-DTIPAMGQGALGIEA-IDKKEILDAIEFLNDEKSVVETTIERDFVHTLNGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
+ I A KG + I+ DG
Sbjct: 237 APIGINAKLKGDKIEVEAILGLVDG 261
>gi|121605981|ref|YP_983310.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2]
gi|120594950|gb|ABM38389.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2]
Length = 331
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 137/244 (56%), Gaps = 3/244 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA+ A ++ L + ++ ++T GD+I +R+L+++GGKGLF +E
Sbjct: 16 IATRESRLAMWQAEHVKALLESRLG---WQVELLGMTTLGDQILDRSLSKVGGKGLFVKE 72
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++ L RED D F+S+ SL +L +V+
Sbjct: 73 LEVALSEGRADLAVHSLKDVPMDLPEGFALACVLEREDPHDAFVSNDFASLAELPPGAVV 132
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR LL R D+++ RG ++TRL KL+ + AI+LA AG+KRL E I+
Sbjct: 133 GTSSLRRLVLLKALRPDLAIQPLRGNLDTRLRKLDEGQYQAIVLAAAGLKRLGLESRIRH 192
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
D P+ GQGA+ IE + + + H+ TW +V ER + GSC
Sbjct: 193 TFAPTDMLPAAGQGALGIEVRADRADLIAALATLAHQPTWLAVTAERTVSRAMGGSCSMP 252
Query: 248 IAGF 251
+A F
Sbjct: 253 LAAF 256
>gi|300856363|ref|YP_003781347.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528]
gi|300436478|gb|ADK16245.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528]
Length = 290
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 154/291 (52%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+I TR S LA L + ++I T GD+ + L +IGGKGLF
Sbjct: 3 FKIATRKSKLAQTQTEIVMDILQKDYNAKCEKVLI---ETMGDKRLDIALNKIGGKGLFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ E D AVHS KD+P + + +I+A + RED+RD F+S +L +
Sbjct: 60 KEIELALLKDEADAAVHSMKDVPFDVPEDFEIAAIMQREDVRDAFVSKDKVPFDELPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR L R DI + RG I+TR++K+ + I+LA AGIKR E+++
Sbjct: 120 KIGTSSNRRAEQLKILRPDIEIAPIRGNIQTRISKIESQNLDGIVLAAAGIKRSHLEELV 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E +ED P+ GQGA+ IET + K + ++ E+T V ER+F+ L+G C
Sbjct: 180 TEYFKVEDMVPAIGQGALGIETK-KDSKNKSFFSKLDDENTRICVEAERSFMRTLNGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
S I +A T+ G+ + + I +V+ GN+ D + +G A+ I
Sbjct: 239 STIGAYAKIDKDTINIMGMFMVGNKLIKKDVT--GNKEDYMVLGEKLAKMI 287
>gi|163814461|ref|ZP_02205850.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759]
gi|158450096|gb|EDP27091.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759]
Length = 350
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 152/271 (56%), Gaps = 20/271 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK
Sbjct: 38 QKKTVKVGTRGSKLALAQTELVIKALNE--RFPQIDFQMVTMSTRGDRDTSRALLEFGGK 95
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
+F EE E+ ++ G+ID AVHSAKDMP ++++GL IS LPR +DVFI + +S D
Sbjct: 96 AVFVEEFEEAILKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDVFIYKSGRSF-DR 154
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-- 179
V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL
Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYPNAVCKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214
Query: 180 --------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
K+++ L+ E P+ QG I IET + +A ++V+ IN +
Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYLSTESMLPAACQGIIAIETRTSG-EAYDMVRAINDTE 273
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ + CERA L+ L+ C I ++ KG
Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELKG 304
>gi|53718657|ref|YP_107643.1| porphobilinogen deaminase [Burkholderia pseudomallei K96243]
gi|53725180|ref|YP_102499.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344]
gi|76808885|ref|YP_332640.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b]
gi|121600693|ref|YP_993593.1| porphobilinogen deaminase [Burkholderia mallei SAVP1]
gi|124386445|ref|YP_001028944.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10229]
gi|126449020|ref|YP_001081141.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10247]
gi|126455102|ref|YP_001065357.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a]
gi|167003503|ref|ZP_02269289.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20]
gi|167901767|ref|ZP_02488972.1| porphobilinogen deaminase [Burkholderia pseudomallei NCTC 13177]
gi|217419743|ref|ZP_03451249.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576]
gi|226194325|ref|ZP_03789923.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9]
gi|237811340|ref|YP_002895791.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346]
gi|242316542|ref|ZP_04815558.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b]
gi|254178350|ref|ZP_04885005.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399]
gi|254190785|ref|ZP_04897292.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237]
gi|254199404|ref|ZP_04905770.1| porphobilinogen deaminase [Burkholderia mallei FMH]
gi|254205719|ref|ZP_04912071.1| porphobilinogen deaminase [Burkholderia mallei JHU]
gi|254260166|ref|ZP_04951220.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a]
gi|254298288|ref|ZP_04965740.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e]
gi|254357877|ref|ZP_04974150.1| porphobilinogen deaminase [Burkholderia mallei 2002721280]
gi|61213345|sp|Q62LC0|HEM3_BURMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|61213357|sp|Q63W73|HEM3_BURPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123599913|sp|Q3JUW3|HEM3_BURP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513523|sp|A3NSN6|HEM3_BURP0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201495|sp|A3MLK5|HEM3_BURM7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201496|sp|A2SAH5|HEM3_BURM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201497|sp|A1V5U0|HEM3_BURMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52209071|emb|CAH35011.1| putative porphobilinogen deaminase protein [Burkholderia
pseudomallei K96243]
gi|52428603|gb|AAU49196.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344]
gi|76578338|gb|ABA47813.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b]
gi|121229503|gb|ABM52021.1| porphobilinogen deaminase [Burkholderia mallei SAVP1]
gi|124294465|gb|ABN03734.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10229]
gi|126228744|gb|ABN92284.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a]
gi|126241890|gb|ABO04983.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10247]
gi|147749000|gb|EDK56074.1| porphobilinogen deaminase [Burkholderia mallei FMH]
gi|147753162|gb|EDK60227.1| porphobilinogen deaminase [Burkholderia mallei JHU]
gi|148027004|gb|EDK85025.1| porphobilinogen deaminase [Burkholderia mallei 2002721280]
gi|157808153|gb|EDO85323.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e]
gi|157938460|gb|EDO94130.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237]
gi|160699389|gb|EDP89359.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399]
gi|217397047|gb|EEC37063.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576]
gi|225933410|gb|EEH29399.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9]
gi|237505195|gb|ACQ97513.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346]
gi|242139781|gb|EES26183.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b]
gi|243060977|gb|EES43163.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20]
gi|254218855|gb|EET08239.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a]
Length = 329
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276
>gi|254196423|ref|ZP_04902847.1| porphobilinogen deaminase [Burkholderia pseudomallei S13]
gi|169653166|gb|EDS85859.1| porphobilinogen deaminase [Burkholderia pseudomallei S13]
Length = 329
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276
>gi|52842939|ref|YP_096738.1| porphobilinogen deaminase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630050|gb|AAU28791.1| porphobilinogen deaminase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 321
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 156/288 (54%), Gaps = 7/288 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 13 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L
Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 250
Query: 241 DGSCKSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
G+C A YC + L VL DG + + G +A
Sbjct: 251 GGNCHIPFA--VYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEA 296
>gi|118594154|ref|ZP_01551501.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181]
gi|118439932|gb|EAV46559.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181]
Length = 305
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 158/293 (53%), Gaps = 2/293 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R SPLA+ A ++ L +++ P +I I T+GD I +++L IGGKGL
Sbjct: 3 KKITIASRESPLAMWQAEHIKTQLNNLY--PYLSIYIKGFKTQGDIILDQSLATIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L+ E D AVHS KD+P + + Q+SA RED RD FIS +SL D+
Sbjct: 61 FIKELEQALLKKEADLAVHSMKDLPMDIYEDFQLSAITAREDPRDAFISLKYKSLDDMPD 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR++ + + + RG ++TRL+KL + AI+LA AG+ RL +
Sbjct: 121 GAIVGTSSLRRQSQIKAKYPSLIIEPLRGNLQTRLSKLKKGQYGAIILAAAGLIRLDLQD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++ P+ GQGA+ IE +N + L+K +N +DT V ER L GS
Sbjct: 181 QITMYIDKNVSIPAVGQGALGIEILSSNTELDLLLKPLNDDDTSRCVLAERMVSRSLAGS 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + A+ + + G V + +G+ G + D +G +Q +
Sbjct: 241 CTVPLGAHAFINKNAMVINGFVASPNGEKIIHAEMKGVKADFYKLGESLSQLL 293
>gi|61213316|sp|Q5ZRY6|HEM3_LEGPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 156/288 (54%), Gaps = 7/288 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
G+C A YC + L VL DG + + G +A
Sbjct: 239 GGNCHIPFA--VYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEA 284
>gi|254498735|ref|ZP_05111451.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12]
gi|254352063|gb|EET10882.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12]
Length = 309
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 156/297 (52%), Gaps = 3/297 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A R L+ + P + ++P++T GD+ L +GG
Sbjct: 1 MNSRIIHIATRQSPLALWQANHVRGLLLK--QWPMLQVELLPMTTSGDKFLKDKLLAVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHSAKDMP + GL ++A R++ DV +S L D
Sbjct: 59 KGLFVKELEEALLDNRADIAVHSAKDMPAEFPAGLGLAAICKRDNPFDVLVSKHYAKLVD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR++ LL +R D+ + RG I TRL KL + + AI+LA AG++R+
Sbjct: 119 LPQQAIVGTGSLRRQSQLLAYRPDLCIKPLRGNINTRLAKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ + P+ QGA+ IE + + EL+ +N + V+ ER A L
Sbjct: 179 FNHAISEQLSEQIMLPACAQGALAIECRTEDQEIHELLAGLNDPLSAVCVHTERQVNALL 238
Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G+C +A F A + L+ +L DG + + G A + + AQ +
Sbjct: 239 GGNCHVPLAVFCAPTTSNQLFLQAKILNQDGSKIIQNQQTGALDKATVLAYNCAQSL 295
>gi|78357663|ref|YP_389112.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123741224|sp|Q30Y29|HEM3_DESDG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78220068|gb|ABB39417.1| hydroxymethylbilane synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 316
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 154/295 (52%), Gaps = 2/295 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A + +M + + ++ L TKGD I + L ++GGKGL
Sbjct: 2 KKIVIATRGSKLALWQAEHIKERIMQQYP-DSFEVELLVLKTKGDIILDVPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G D AVHS KD+P +L +GL + A RE D +S L L
Sbjct: 61 FVKEIEEALLDGRADIAVHSMKDVPMELPQGLTLGAIPEREVPTDSLLSARYDGLDALPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR++ +L R D+ V RG ++TR+ KL + + AI++A +G+KRL +
Sbjct: 121 GAVVGTSSLRRQSQILAMRPDLEVKWLRGNVQTRIRKLMDGEYDAIIMATSGLKRLGETA 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L F P+ GQGA+ +E + E++ ++H + V ER FL L G
Sbjct: 181 PFHSELGPPLFMPAVGQGALGLEYRSDRQDLAEMLAFLDHRPSRICVEAERGFLFGLQGG 240
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ IAG+A G ++ G+V DG + G DA + G A ++
Sbjct: 241 CQVPIAGYAVMTGDNSFELTGLVAELDGTAVIRRTAAGTEADARDTGLTLAAQVK 295
>gi|254181386|ref|ZP_04887983.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655]
gi|184211924|gb|EDU08967.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655]
Length = 329
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAALMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276
>gi|291298238|ref|YP_003509516.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728]
gi|290567458|gb|ADD40423.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728]
Length = 307
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 159/295 (53%), Gaps = 10/295 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SP+ALA A ++L + P + I+P +T GD+ L+++GGKG FT
Sbjct: 5 VRIGTRSSPMALAQADRVSAALTALD--PDVAVEIVPFTTSGDKWMG-PLSQLGGKGAFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+ G D VH KD+P L +G I+A+L R+D+RD + SL DL
Sbjct: 62 KEVDAALVEGTCDLCVHCVKDIPGDRDLPEGTVIAAHLERDDVRDALVHPGGLSLSDLPD 121
Query: 124 HSVIGTSSLRRKA-LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S IGTSS RR A L L W +S + RG TRL KL+ A+LLA +G++RL
Sbjct: 122 GSRIGTSSPRRAAQLALHWPR-LSPLPIRGNANTRLAKLDAGDFDALLLAVSGLERLALT 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL+++ P+ G G + ++ ++ ++LV ++ T ER+ L L+G
Sbjct: 181 DRITEILDVDTMVPAIGSGTLALQCRTDDTPVRDLVARLDDPMTSWRTEAERSMLRALNG 240
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C S IAG+A + L +G V++ DG E +G DA +G A+ +
Sbjct: 241 HCHSPIAGYAIQESEGVLSLHGRVMSLDGSTVLEARESG--ADATALGTSVAEAL 293
>gi|209516094|ref|ZP_03264954.1| porphobilinogen deaminase [Burkholderia sp. H160]
gi|209503554|gb|EEA03550.1| porphobilinogen deaminase [Burkholderia sp. H160]
Length = 332
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 153/265 (57%), Gaps = 4/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I +R S LA+ A R +L HK+ P + I+ ++T+GD+I +RTL+++GGKGLF +
Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCEVKILGMTTRGDQILDRTLSKVGGKGLFVK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L +V
Sbjct: 72 ELEAALADGRADLAVHSLKDVPMELPAGFVLSTIMEREDPRDALVSNQYDSLAALPAGAV 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+A+L ++ V RG ++TR+ KL+ AI+LA AG+KRL I+
Sbjct: 132 VGTSSLRREAMLRMRYPNLDVRPLRGNLDTRVAKLDRGDYAAIILAAAGLKRLGLADRIR 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC+
Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSCEV 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
+A +A L+ GIV DG+
Sbjct: 252 PLAAYATWGDGALHLRGIVATPDGQ 276
>gi|71064670|ref|YP_263397.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4]
gi|71037655|gb|AAZ17963.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4]
Length = 345
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 23/294 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLAL A R L+ ++ P I ++ + TKGD+I + L +IGGKGLF
Sbjct: 12 LNIATRQSPLALWQAEHIRDRLLVLY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLFV 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L +
Sbjct: 70 KELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIDELPQGA 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT+SLRR+ + +R+D+ + RG + TRL+KL+ + AI+LA +G++RL+ I
Sbjct: 130 VVGTASLRRQCQIKAYRADLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLQRLELNARI 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+I+ P+ GQGA+ IE ++ + +L+ +N + + ERA L G C+
Sbjct: 190 RSELDIDICLPAVGQGALAIECRADDDEVLKLLAPLNDDKARIRLIAERALNRHLQGGCQ 249
Query: 246 SAIAGFAYCK---------------------GSTLYFYGIVLASDGKIFHEVSR 278
IA +A + G TL+ G V DG +V +
Sbjct: 250 VPIAAYAVLQKADALAADNDDNGSVSNNNDAGDTLWLRGRVGQEDGSELLKVEK 303
>gi|313673928|ref|YP_004052039.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312940684|gb|ADR19876.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 308
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 157/306 (51%), Gaps = 4/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A +S L ++ P + + + T+GD I + L +IGG
Sbjct: 1 MEK--ITIATRGSKLALWQANHIKSLL--TNRYPEMLVELKIIKTQGDIILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE LI E D AVHS KD+P +L L+I RE D F+S +L +
Sbjct: 57 KGLFVKEIENALIENEADLAVHSMKDVPVELPDELEIYVNPHRESPFDAFLSVKYNNLDE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRK + R R DI + D RG ++TR+ KL AI+LA AG+ RL
Sbjct: 117 LPRGAKLGTSSLRRKVQISRIRPDIEITDLRGNVDTRIRKLTEGTFDAIILARAGLNRLN 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ K + + PS QG + IE ++ + + ++K + E T ERAFL L
Sbjct: 177 LLEWAKYTFDDSEIVPSVCQGTLGIEVRKDDDRIKNILKFMKDEKTEIVTRAERAFLRRL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ I G+ +G L G + + DG F + G+ +G A+ I
Sbjct: 237 EGGCQAPIGGYCKIEGGKLKMIGFLSSLDGDEFLKYEEYGDMDKPEVLGESVAEKILING 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 GKKILD 302
>gi|145592923|ref|YP_001157220.1| porphobilinogen deaminase [Salinispora tropica CNB-440]
gi|145302260|gb|ABP52842.1| hydroxymethylbilane synthase [Salinispora tropica CNB-440]
Length = 322
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 156/294 (53%), Gaps = 11/294 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K P R+GTR S LA+A + + +L P + ++ + T GDR T + ++G G
Sbjct: 2 KVPLRLGTRGSALAMAQSGQVAEALTAATGTP---VELVEVVTTGDRSTA-PVHQLG-VG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L +G ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 57 VFVSALRDALAAGAIDFAVHSYKDLPTAAAPGLYVAAVPPRQDPRDALVATGGRTLAELP 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLK 180
+ +GT +LRR A L + V RG + TRL ++ +A A++LA AG+ RL
Sbjct: 117 PGARVGTGALRRIAQLHALGLQLEVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLD 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L
Sbjct: 177 RTDTITETLDPMLMLPAPAQGALAVECRSDDSALVELLAVLDHAPSRATVVAERALLATL 236
Query: 241 DGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+ C + +A +A G +Y G V++ DG +SR G DA+ IG+
Sbjct: 237 EAGCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGK 290
>gi|317402904|gb|EFV83446.1| HemC protein [Achromobacter xylosoxidans C54]
Length = 314
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 148/282 (52%), Gaps = 2/282 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF +E
Sbjct: 9 IATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVH KDMP + ++ A L R D RD F+S+ +L DL +V+
Sbjct: 67 LETALLDGRADLAVHCLKDMPVDMQAPFELCAVLDRADPRDAFVSNRYATLADLPAGAVV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL I
Sbjct: 127 GTSSLRRESQIRARYPQLLVKPLRGNLDTRLGKLDRGEYDAIVLAAAGLNRLGLTDRISS 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+ + P+ GQGA+ IE + + + +N ERA L GSC+
Sbjct: 187 LLDPAESLPAAGQGALTIEIRDDRDDMRAWLAPLNDAGATSISLAERAVSRRLGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A +A TL +V + DG +G A IG
Sbjct: 247 LAAYAEIADDTLTLRALVASPDGTRMLRAHGSGPVAQAQAIG 288
>gi|302549045|ref|ZP_07301387.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
gi|302466663|gb|EFL29756.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
Length = 311
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 147/291 (50%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRTELAAAH--PGVRTEVVPVKTTGDKWMG-DLSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDIRDALIHPDGLTLDELPA 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++
Sbjct: 124 GTRIGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLAAKEADALLLAVAGLERIGRQD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI EIL+ E P G G + ++ ++ + V + DT+ ER FL L G
Sbjct: 184 VISEILSTETMMPPIGAGVLALQCREDDADLIDAVSGLGDPDTYRETMAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAGFA+ + L V DGK R D +G A
Sbjct: 244 CNSPIAGFAHVDRSGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVA 294
>gi|134281147|ref|ZP_01767856.1| porphobilinogen deaminase [Burkholderia pseudomallei 305]
gi|134247453|gb|EBA47538.1| porphobilinogen deaminase [Burkholderia pseudomallei 305]
Length = 329
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276
>gi|189220198|ref|YP_001940838.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4]
gi|189187056|gb|ACD84241.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4]
Length = 298
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 154/284 (54%), Gaps = 11/284 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP IG+R S LAL A SL + P +I I + T GD + + + +I +G+
Sbjct: 2 KPLIIGSRGSRLALIQAQLIVDSLKKEY--PLLDIQIRVIKTTGDHLEAQPIRDIDQRGI 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EIE KL+ GEID AVHS KD+ +L L I+A PRED RD +IS L
Sbjct: 60 FTKEIENKLLEGEIDLAVHSLKDLQVELHPRLVIAAIPPREDPRDCWISLQHPHPSSLQA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKKE 182
+++ T S RR LLR R D+ ++ RG +E+RL KL N+ +LA AGIKRL +
Sbjct: 120 GAIVVTGSPRRANQLLRKRPDLRIVPVRGNVESRLRKLRENRQWQGTVLALAGIKRLGID 179
Query: 183 --KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
L+++ P+PGQGA+ ++ + + Q LVK +N T +V ER FL EL
Sbjct: 180 ISSFFCTPLSMDWMLPAPGQGALALQARIEDKHTQSLVKHLNDFSTACAVTAERVFLHEL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI------VLASDGKIFHEVSR 278
G C++A+ A +GS L GI + +GK+ E+ R
Sbjct: 240 GGGCRTAVGARAEVEGSRLVLEGIWWPQQAIEPKEGKVVGEIHR 283
>gi|94676875|ref|YP_588539.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123384158|sp|Q1LU25|HEM3_BAUCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94220025|gb|ABF14184.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 311
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 149/268 (55%), Gaps = 2/268 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR SPLA+ A R+ L+ + P I ++P+ T GD I ++ L + GGK LF
Sbjct: 6 LKIATRQSPLAIWQANYVRNQLLSFY--PTLLIELVPIVTSGDLILDKPLMKAGGKRLFI 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ ++ D AVHS KD+ +G+ ++ RED RD FIS S+ L +
Sbjct: 64 KELEQAMLERRADIAVHSMKDITISFPEGIGLAVLCAREDPRDAFISTHYASIDLLPTGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS+RR+ L R D+ + D RG I TRL KL+ + A++LA AG+KRL I
Sbjct: 124 VVGTSSMRRQCQLRERRPDLVMRDLRGNIGTRLEKLDKGEYDALILAAAGLKRLDLAHRI 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ I++ + P+ GQG I IE + + ++ ++H T V+ ERA A+L G C+
Sbjct: 184 RMIIDPTELLPAVGQGVIGIEYRLEDTHILSILAPLHHSATALRVSAERAMNAKLAGGCQ 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIF 273
I +A +G ++ +V + DG +
Sbjct: 244 VPIGSYAEIEGDQIWLRALVGSPDGSLI 271
>gi|302391331|ref|YP_003827151.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501]
gi|302203408|gb|ADL12086.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501]
Length = 314
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 163/291 (56%), Gaps = 4/291 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LA+ A E + ++ + + + + TKGD+I + L+++GGKGLF +E
Sbjct: 8 IGTRSSDLAVGQA-EIVAEMLG-KAVSEYEFELEKIKTKGDKILDSPLSQVGGKGLFIKE 65
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ EID AVHS KDMP +L +GL + + R D RD +S+ ++L +L + I
Sbjct: 66 LEVSLLEEEIDLAVHSMKDMPAELPEGLAVLGFPERVDSRDALVSNGDRNLDELPTGARI 125
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKEKVI 185
GT SLRR + LL +R D+ V+ RG I TRL KL + + AI+LA AG+ R+ + I
Sbjct: 126 GTGSLRRTSQLLNYRPDLEVVPIRGNINTRLEKLTAEELNLDAIVLAAAGLIRMGWKDKI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ E P+ GQGA+ IE ++ + + L+ I+ + T + ER FL LDG C+
Sbjct: 186 TEYLDDEVMLPAAGQGALAIEAREDDEEIKTLINKIDDQRTRYILQAERGFLERLDGDCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I A +G + G+V DG+ G+ +A +G + A+ +
Sbjct: 246 VPIGALAEIEGEEITLEGMVATLDGQKHLRDQITGSVGEAEELGIELAEEL 296
>gi|239637532|ref|ZP_04678504.1| porphobilinogen deaminase [Staphylococcus warneri L37603]
gi|239596750|gb|EEQ79275.1| porphobilinogen deaminase [Staphylococcus warneri L37603]
Length = 308
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 157/270 (58%), Gaps = 4/270 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKQVR--PDLDIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L S+I
Sbjct: 64 IQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELPEGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FLAE+DGSC+
Sbjct: 184 TYLDKDILLPAIGQGALGIECRSDDEELLELLKEVHNKDVEKCVTAERTFLAEMDGSCQV 243
Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHE 275
I G+A + F G+++ DG +E
Sbjct: 244 PIGGYATINSQQQIEFTGLIMTPDGTERYE 273
>gi|54295573|ref|YP_127988.1| porphobilinogen deaminase HemC [Legionella pneumophila str. Lens]
gi|61213284|sp|Q5WT65|HEM3_LEGPL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|53755405|emb|CAH16901.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Lens]
Length = 309
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 154/283 (54%), Gaps = 7/283 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPQFKSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ V RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQVKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIYGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG 280
G+C A YC + L VL DG + + G
Sbjct: 239 GGNCHIPFA--VYCTITAENLLLLRAKVLNLDGSQMIDDEQQG 279
>gi|70726258|ref|YP_253172.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435]
gi|123748643|sp|Q4L709|HEM3_STAHJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|68446982|dbj|BAE04566.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435]
Length = 310
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 167/292 (57%), Gaps = 6/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + L V P I I + TKGDRI N+ L+++GGKGLF +E
Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVD--PTLEIEIKEIVTKGDRIVNKQLSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+++L EID A+HS KD+P+ + +GL + RE D +IS L +L S+I
Sbjct: 64 IQQELFDKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHIPLNELPDGSII 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++
Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLKKLEIEDYDAIILAAAGLRRMGWSDDIVT 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ + P+ GQGA+ IE ++ + EL+ ++++ + V ER FL+ +DGSC+
Sbjct: 184 TYLDKDILLPAIGQGALGIECRSDDVELLELLSKVHNQAVANCVTAERTFLSAMDGSCQV 243
Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I G+A K + F G+++ DG +E + G + +++G ++ ++
Sbjct: 244 PIGGYATNKENGEIEFTGLIMTPDGTKRYEHTEVGK--NPVDLGEAVSRVLK 293
>gi|120602319|ref|YP_966719.1| porphobilinogen deaminase [Desulfovibrio vulgaris DP4]
gi|158513905|sp|A1VCX6|HEM3_DESVV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120562548|gb|ABM28292.1| hydroxymethylbilane synthase [Desulfovibrio vulgaris DP4]
Length = 315
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 157/290 (54%), Gaps = 2/290 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A E SL++ ++ + + TKGD I + L ++GGKGLF +E
Sbjct: 6 IATRGSKLALWQA-EHIKSLIETEHAGKVDVSLKIIKTKGDIILDVPLAKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L + +
Sbjct: 65 IEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPHGARV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL E
Sbjct: 125 GTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLSAPHHE 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G C+
Sbjct: 185 VLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGGCQVP 244
Query: 248 IAGFAYCKGSTLY-FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG A G + G+V G+ + G +A N G + A +
Sbjct: 245 IAGHAVMTGDDDFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQV 294
>gi|170691941|ref|ZP_02883105.1| porphobilinogen deaminase [Burkholderia graminis C4D1M]
gi|170143225|gb|EDT11389.1| porphobilinogen deaminase [Burkholderia graminis C4D1M]
Length = 318
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 157/271 (57%), Gaps = 4/271 (1%)
Query: 30 VHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88
+HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P
Sbjct: 11 LHKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVP 70
Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
+L G +S + RED RD +S+ SL L +V+GTSSLRR+A+L + V
Sbjct: 71 MELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGTSSLRREAMLRMRYPHLEVR 130
Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208
RG ++TRL KL+ AI+LA AG+KRL E I+ +L+ ED P+ GQGA+ IE
Sbjct: 131 PLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEGRIRALLDPEDSLPAAGQGALGIEIR 190
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
+ + + ++HE T +V ER L GSC+ +A +A L+ GIV
Sbjct: 191 SDRAELAAWLAPLHHEHTAAAVEAERMVSRVLGGSCEVPLAAYATWHDGALHLRGIVATP 250
Query: 269 DGK--IFHEVSRNGNRCD-AINIGRDAAQYI 296
DG+ + + S + AI +GR+ A +
Sbjct: 251 DGQRVLSAQASAPAPTTERAIALGREVANAL 281
>gi|167910007|ref|ZP_02497098.1| porphobilinogen deaminase [Burkholderia pseudomallei 112]
Length = 278
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276
>gi|254458597|ref|ZP_05072022.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1]
gi|207084905|gb|EDZ62192.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1]
Length = 319
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 167/296 (56%), Gaps = 6/296 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A+ ++ + + P + + + + GD++ ++ L IGGKG FT+E
Sbjct: 6 IATRVSDLALWQAYHIKARVEASY--PEITVELNKIVSNGDKVLDKPLALIGGKGHFTKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E ++++G D AVHS KD+PT + +GL++ A R+D DVF+SH +L+DL +V+
Sbjct: 64 LEDEMLAGNADIAVHSLKDVPTYIPEGLELVAVTQRQDQSDVFLSHKHATLEDLPQGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--KEKVI 185
GT+SLRR+ LL+ R D+ V D RG + TRL KL+ + AI+LA+ G+ RL K+
Sbjct: 124 GTTSLRRRMQLLQQRPDLKVKDLRGNVNTRLRKLSEGQYDAIILAWIGLHRLDLLKDVPF 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+++ P GQ A+ IE N K +E+ + + +T+ ER F++++ C
Sbjct: 184 TQKLSLDMMIPPMGQAALGIEIVCGNAKVREIAESLKDLNTFICTQIERDFISKIGAGCS 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A + + F ++ DG + N D+ N+G + A+ + I N
Sbjct: 244 APVACNAVIDDNIITFRVMLGFPDGTNIMQEKVVINVEDSDNLGSELAK--KMIDN 297
>gi|294789041|ref|ZP_06754281.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453]
gi|294483143|gb|EFG30830.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453]
Length = 311
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 160/292 (54%), Gaps = 7/292 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A ++ L ++ P ++ I+ ++T+GD+I ++TL++IGGKGLF +E
Sbjct: 9 IASRESALAMWQAQHIQAQLQQLY--PQCDVSILGMTTQGDQILDKTLSKIGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G + A R + D F+S+ L+DL +++
Sbjct: 67 LEVALQDGRADLAVHSIKDVPMVLPEGFALVAISERANPFDAFVSNHYTRLEDLPKGAIV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ I+
Sbjct: 127 GTSSLRREAQLRARFPHLTIQPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHNRIRH 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+ D P+ GQGA+ IE + + +NH T V ERA L GSC+
Sbjct: 187 VLSPADSLPAAGQGALGIEIAAHRTDLIATLLPLNHAKTAACVTAERALARALGGSCQVP 246
Query: 248 IAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A AYC L +G+V DG + + A +GR A+ +
Sbjct: 247 LA--AYCTADDAGLLTLHGLVAHPDGSVVLNANAQAPAQYADALGRAVAKKL 296
>gi|209526164|ref|ZP_03274695.1| porphobilinogen deaminase [Arthrospira maxima CS-328]
gi|209493420|gb|EDZ93744.1| porphobilinogen deaminase [Arthrospira maxima CS-328]
Length = 322
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 157/299 (52%), Gaps = 5/299 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RI +R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + +H + L
Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ E + GQGA+ +E + + E+VK + H T + ERAFL
Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGLECREGDTEIFEVVKALEHTVTAQRCHSERAFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK + + G DA +G A ++
Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIQLAHKLK 304
>gi|167918037|ref|ZP_02505128.1| porphobilinogen deaminase [Burkholderia pseudomallei BCC215]
Length = 276
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276
>gi|317064836|ref|ZP_07929321.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
gi|313690512|gb|EFS27347.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
Length = 299
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 145/264 (54%), Gaps = 4/264 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LA+A + + L + P I + T GD ++N ++
Sbjct: 2 KKKIVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L +
Sbjct: 60 KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTLME 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR+
Sbjct: 120 LPAGAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKRVG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
EK I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F
Sbjct: 180 LEKEITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSKIF 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI 264
DG C + + G + GI
Sbjct: 240 DGGCHTPMGCHCILDGDKITLTGI 263
>gi|254796754|ref|YP_003081590.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois]
gi|254589999|gb|ACT69361.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois]
Length = 286
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 159/288 (55%), Gaps = 11/288 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G RCS LALA A +L + I ++ + T GD +++ LTE+GGK LF
Sbjct: 4 LKVGARCSTLALAQARLVERALAPYCE----RIDLVGVRTSGDILSDIPLTEVGGKALFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L +
Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPSGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT + RR +++ VI RG I TR+ K N I+LA+ G++RL K+I
Sbjct: 120 VIGTCAPRR---VVQLNQRFRVIPLRGNIATRVEKAKN--LDGIILAFCGLERLGLCKMI 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+++ + P QGA+C+E + +EL+ I+ +T ERAFL E++G CK
Sbjct: 175 SEVIHEDVMLPGVAQGALCVEFRKKDHFLRELILNISDRETIICTTAERAFLEEINGDCK 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+A+ A K +TLYF G++ + + S G+ +A IGR AA
Sbjct: 235 TALGALAVVKNNTLYFTGMLGKDNRPCYFRTS--GSCLNAKQIGRSAA 280
>gi|238563412|ref|ZP_00438929.2| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4]
gi|238520765|gb|EEP84222.1| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4]
Length = 393
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 80 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 137
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 138 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 197
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 198 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 257
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+
Sbjct: 258 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 317
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 318 LAAHAVWRGGELHLTGSVSTTDG 340
>gi|153206963|ref|ZP_01945781.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177']
gi|154707682|ref|YP_001425472.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111]
gi|165918283|ref|ZP_02218369.1| porphobilinogen deaminase [Coxiella burnetii RSA 334]
gi|212219568|ref|YP_002306355.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154]
gi|189028088|sp|A9KDC4|HEM3_COXBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706283|sp|B6J6K0|HEM3_COXB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120577036|gb|EAX33660.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177']
gi|154356968|gb|ABS78430.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111]
gi|165918143|gb|EDR36747.1| porphobilinogen deaminase [Coxiella burnetii RSA 334]
gi|212013830|gb|ACJ21210.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154]
Length = 307
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 160/297 (53%), Gaps = 6/297 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59
++K+ I TR SPLAL A + + + H PH I+ +T+GDR+T L + G
Sbjct: 2 IKKRSILIVTRKSPLALWQAEFVKQQIENSH---PHLACQILGCTTQGDRLTTEKLVDSG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GK LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L
Sbjct: 59 GKDLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLI--VKGELS 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 117 TLPPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRL 176
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +
Sbjct: 177 GLENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEK 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C + IA A K L + ++ DG++ + GN +A IG A +
Sbjct: 237 LGGDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAQRIGFKVASQL 293
>gi|332706560|ref|ZP_08426621.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L]
gi|332354444|gb|EGJ33923.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L]
Length = 322
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 158/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L P + +ST GD+I + L++IG KGL
Sbjct: 10 RTIRIGSRKSQLALIQTYWVQEQLK--KHFPDREFEVQTMSTHGDKILDVALSKIGDKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
FT+E+E ++ EID AVHS KD+PT+L +GL + RE+ D + H + ++
Sbjct: 68 FTKELELGMLRDEIDFAVHSLKDLPTRLPEGLVLGCVTERENPADALVMHQKHLDKQIET 127
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S+IGTSSLRR A L +S D RG + TRL KL+ A++LA AG+KRL
Sbjct: 128 LPEGSIIGTSSLRRLAQLRYHFPHLSFKDVRGNLNTRLAKLDAGDYDALILAVAGLKRLD 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL E + GQGA+ IE ++ + EL+ I H T ER+ L L
Sbjct: 188 MSDRIHQILPPEISLHAVGQGALGIECREDDQEVLELLNAIAHPPTAQRCYAERSLLRAL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I +G+TL IV + DG+ + + G + A N+G + A+ ++
Sbjct: 248 EGGCQVPIGVDTQLEGNTLTLTAIVASVDGQKLVKDTIQGEQSQAENLGLELAEQLK 304
>gi|328949818|ref|YP_004367153.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884]
gi|328450142|gb|AEB11043.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884]
Length = 305
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 9/301 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL L + + P I + T+GDR T +I F +E
Sbjct: 6 VGTRGSALALTQTRWVVERLKE--QWPEAEFKIKTIQTRGDRGAPPTDRDI-----FVKE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126
+E+ L+ GEID AVHS KD+PT+ +GL I++ R D RDVFI + L+DL +V
Sbjct: 59 LEEALLRGEIDIAVHSLKDLPTEQPEGLVIASIPKRVDPRDVFIGRNGIRRLEDLPEGAV 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSS+RRKA LL +R D+ V + RG ++TRL+ L + + I+LA AG+ RL I
Sbjct: 119 VGTSSVRRKAQLLAYRPDLVVRELRGNVDTRLSALGSGEFDGIILAAAGLLRLDLRNRID 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
++ + P+PGQGA+ +E + A EL I+H T D ER+FL L C +
Sbjct: 179 AFIDPKIMLPAPGQGALALEVREGDDIADELAYSIHHHPTDDRTTAERSFLHHLGAGCLA 238
Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A+ + TL G+V+A DG G+ +A +G + A+ I K +
Sbjct: 239 PVGALAHVEEDGTLRLEGVVVAPDGSSMIHGEIEGDAEEAWELGAELARDILEQGGKRIL 298
Query: 306 N 306
Sbjct: 299 E 299
>gi|157164515|ref|YP_001466695.1| porphobilinogen deaminase [Campylobacter concisus 13826]
gi|259647804|sp|A7ZD37|HEM3_CAMC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112800491|gb|EAT97835.1| porphobilinogen deaminase [Campylobacter concisus 13826]
Length = 309
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 159/300 (53%), Gaps = 7/300 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR S LAL + ++ + HK +V+ + TKGD I + L +IGGKGL
Sbjct: 2 KEIKIATRKSILALWQSEHIKARIEAQHK--GMKVVLEGMKTKGDVILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ GE D AVHS KD+P +GL+++A RED RD IS DL
Sbjct: 60 FTKELEDSMLKGETDIAVHSLKDVPVVFPEGLRLAAICSREDTRDAMISEKFAKFSDLPH 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AGI RL +
Sbjct: 120 GAKVGTTSLRRKMQLLIMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNIKA 179
Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I ++ P+ GQGA+ IE + + + +N E+ ER F++ L+
Sbjct: 180 EVAHIYTFGFDEMIPAMGQGALGIEAR-DEKQILDETSFLNDENAVIETTIERDFVSVLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A KG + IV DG + + S ++ ++G++ A +FI
Sbjct: 239 GGCQVPIGISARLKGDEISIDAIVGLPDGSEYIKDSLKTSKDKFQSVGKELAH--KFIEK 296
>gi|46580299|ref|YP_011107.1| porphobilinogen deaminase [Desulfovibrio vulgaris str.
Hildenborough]
gi|55976453|sp|Q72AV0|HEM3_DESVH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46449716|gb|AAS96366.1| porphobilinogen deaminase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233718|gb|ADP86572.1| porphobilinogen deaminase [Desulfovibrio vulgaris RCH1]
Length = 315
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 157/290 (54%), Gaps = 2/290 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A E SL++ ++ + + TKGD I + L ++GGKGLF +E
Sbjct: 6 IATRGSKLALWQA-EHIKSLIETEHAGKVDVSLKIIKTKGDIILDVPLAKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L + +
Sbjct: 65 IEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPHGARV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL E
Sbjct: 125 GTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLAAPHHE 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G C+
Sbjct: 185 VLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGGCQVP 244
Query: 248 IAGFAYCKGSTLY-FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG A G + G+V G+ + G +A N G + A +
Sbjct: 245 IAGHAVMTGDDNFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQV 294
>gi|162147854|ref|YP_001602315.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542474|ref|YP_002274703.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786431|emb|CAP56013.1| Porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530151|gb|ACI50088.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
Length = 367
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 167/325 (51%), Gaps = 29/325 (8%)
Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
P R+GTR SPLAL AF T + L D+ H I +T GD++ NR L E
Sbjct: 46 PLRVGTRASPLALVQTRAFLTMLTRFCPVLRDMGAFQEHQI-----NTTGDQVQNRRLAE 100
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------ 111
IGGKGLF +EI L G ID AVHS KD+ T L GL ++ L RED RD I
Sbjct: 101 IGGKGLFAKEIHDALSDGRIDFAVHSLKDLETTLPPGLVLACTLRREDARDALILGPGAG 160
Query: 112 -----SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
+ A L ++++G +S+RR+A +L R D+ RG ++TRL+KL +
Sbjct: 161 GRHDAADAADPYAALPRNALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQC 220
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A LLA AG++RL E +L+ E P+ GQG + + ++ + +EL+ I +
Sbjct: 221 DATLLALAGLRRLGMEDRADIVLDPEIMVPAAGQGIVGVTVRESDVELRELLAAIEDYEA 280
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNG 280
ERA LAELDGSC++ I G+A ++L G+V DG + G
Sbjct: 281 RAVATAERALLAELDGSCRTPIGGYARLVPGLAGAEASLRLTGLVAREDGSFLLRRTVTG 340
Query: 281 NRCDAINIGRDAAQYIRFISNKNVF 305
R DA +GR+ + +R S +VF
Sbjct: 341 LRADAEEMGRELGRSLRMDSPSDVF 365
>gi|29655352|ref|NP_821044.1| porphobilinogen deaminase [Coxiella burnetii RSA 493]
gi|212213517|ref|YP_002304453.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212]
gi|39931503|sp|Q83A37|HEM3_COXBU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706284|sp|B6J3T6|HEM3_COXB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|29542624|gb|AAO91558.1| porphobilinogen deaminase [Coxiella burnetii RSA 493]
gi|212011927|gb|ACJ19308.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212]
Length = 307
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 160/297 (53%), Gaps = 6/297 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59
++K+ I TR SPLAL A + + + H PH I+ +T+GDR+T L + G
Sbjct: 2 IKKRSILIVTRKSPLALWQAEFVKQQIENSH---PHLACQILGCTTQGDRLTTEKLVDSG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GK LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L
Sbjct: 59 GKDLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLI--VKGELS 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 117 TLPPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRL 176
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +
Sbjct: 177 GLENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEK 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C + IA A K L + ++ DG++ + GN +A IG A +
Sbjct: 237 LGGDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQL 293
>gi|148358525|ref|YP_001249732.1| porphobilinogen deaminase [Legionella pneumophila str. Corby]
gi|148280298|gb|ABQ54386.1| porphobilinogen deaminase [Legionella pneumophila str. Corby]
Length = 321
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 156/288 (54%), Gaps = 7/288 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 13 MSAKIIRIATRQSPLALWQANHVRKML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLAAICKRDNPFDALISPQFKSLDA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 250
Query: 241 DGSCKSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
G+C A YC + L VL DG + + G +A
Sbjct: 251 GGNCHIPFA--VYCTITEEKRLLLRAKVLNMDGSQMIDDEQQGKIAEA 296
>gi|126439305|ref|YP_001058121.1| porphobilinogen deaminase [Burkholderia pseudomallei 668]
gi|166201498|sp|A3N700|HEM3_BURP6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|126218798|gb|ABN82304.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 668]
Length = 329
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMVLPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A +G L+ G V +DG
Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276
>gi|119484355|ref|ZP_01618972.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
gi|119457829|gb|EAW38952.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
Length = 321
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + ++ L P + +ST+GD+I + L +IG KGL
Sbjct: 9 RTVRIGSRKSQLALVQTYWVQAELKK--HFPDIEFEVHTMSTQGDKILDVALAKIGDKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E +++ + D AVHS KD+PT L +GL + RE+ D + H + L+
Sbjct: 67 FTKELEVGMLNHDTDIAVHSLKDLPTNLPEGLMLGCVTERENPADALVVHERHKDKQLET 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ AI+LA AG+KRL
Sbjct: 127 LPQGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLEKLDEGGYDAIILAVAGLKRLG 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + ++ + + GQGA+ IE + E++KV+ H T + ERAFL EL
Sbjct: 187 MGDRIHQTISPDVSLHAVGQGALGIECRDGDENILEILKVLEHTPTAQRCHAERAFLREL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I + + + L G+V + DGK + +G +A +G D A +R
Sbjct: 247 EGGCQVPIGVNSEVENNQLTLIGMVASLDGKRLIRDTVSGETTNAEQLGIDLAHRLREQG 306
Query: 301 NKNVFN 306
K + +
Sbjct: 307 AKEILD 312
>gi|146329177|ref|YP_001209219.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A]
gi|158513296|sp|A5EW83|HEM3_DICNV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146232647|gb|ABQ13625.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A]
Length = 305
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 151/287 (52%), Gaps = 12/287 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A L + P + ++P+ T+GD + + L++IGGK LF
Sbjct: 4 LRIATRKSPLALWQAEHVAQQLKQHY--PELTVELVPIVTQGDILAHTPLSKIGGKNLFI 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + D AVHS KD+ L +G ++A LPRE+ D +S+ L +L +
Sbjct: 62 KELEIAMQQNAADIAVHSMKDVGVTLPEGFVLAAILPRENPFDALVSNHYAHLNELPNGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT SLRRK L +R D+ +ID RG + TRL KL++ A++LA AG+ RL++ I
Sbjct: 122 RVGTCSLRRKMQLAHYRPDLKLIDIRGNVHTRLQKLDSGAFDALILACAGLIRLQQNARI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++IL E P+ GQGAI +E ++P ++ +NH +T V ER L G C+
Sbjct: 182 RQILPAEISLPAIGQGAIGVECRADSPFLAH-IQTLNHFETAVCVQTERVVNQRLQGDCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK---------IFHEVSRNGNRC 283
IA FA G T+ + DG+ + + G RC
Sbjct: 241 VPIAVFATLSGKTMTLQSRIGTIDGQRMLAHQEICALEDAEKAGARC 287
>gi|328871819|gb|EGG20189.1| porphobilinogen deaminase [Dictyostelium fasciculatum]
Length = 318
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 164/313 (52%), Gaps = 9/313 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+KK IG+R S LAL L ++H +N + L T GDR+ N L++IG K
Sbjct: 3 DKKTVYIGSRKSQLALVQTHHVIDRLKELHG-SKYNFELKTLDTVGDRVLNVALSKIGDK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----- 116
GLFT+E+E +ISG+ID AVHS KD+PTK +GL + A RE+ D FI + ++
Sbjct: 62 GLFTKELEDLMISGDIDIAVHSLKDIPTKFPEGLGLGAITKRENCLDAFIVNASKHRPTC 121
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAG 175
+L +L ++IG+SSLRR + L R + D RG + TR KL + + ++LA AG
Sbjct: 122 TLAELPEGAIIGSSSLRRVSQLKRAYPHLQFKDIRGNLNTRFEKLEKSGEYDGMILAVAG 181
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
++RL I EI+ + GQGA+ IE N+P L++ +N +DT ERA
Sbjct: 182 LERLGWTDRITEIIQPTVSLYAVGQGALGIECRSNDPLIMSLLEPLNDKDTASCCIAERA 241
Query: 236 FLAELDGSCKSAIAGFAY--CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
L+EL+G C I + + + GIVL DG +S G +GR+ A
Sbjct: 242 MLSELEGGCHVPIGVISSIDVERQLITLEGIVLNLDGSRAIRLSHTGPLASCHQVGRELA 301
Query: 294 QYIRFISNKNVFN 306
Q + K + N
Sbjct: 302 QQLIEKGAKEILN 314
>gi|296115106|ref|ZP_06833747.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769]
gi|295978207|gb|EFG84944.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769]
Length = 358
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 166/321 (51%), Gaps = 25/321 (7%)
Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
P ++GTR SPLAL AF T + L D+ H I ST GD++ NR L E
Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQI-----STTGDQVLNRKLAE 95
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IGGKGLF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I
Sbjct: 96 IGGKGLFAKEIHEALLDGRIDFAVHSLKDLETALPPGLVLACTLRREDARDVLILGPDCP 155
Query: 118 LKD-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
D LA +++G +S+RR+A +L R D+ RG ++TRL+KL + A L
Sbjct: 156 TPDPMDPYSALAPGALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCEATL 215
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG++RL E IL+ P+ GQG + + ++ + +EL+ I +
Sbjct: 216 LALAGLRRLGMEDRADVILDPTVMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVA 275
Query: 231 NCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
ERA LAELDGSC++ I G+A L+ G+V DG + S +G D
Sbjct: 276 TAERALLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPSD 335
Query: 285 AINIGRDAAQYIRFISNKNVF 305
A +G + +R S ++F
Sbjct: 336 AARLGHALGRSLRADSPSDIF 356
>gi|119714759|ref|YP_921724.1| porphobilinogen deaminase [Nocardioides sp. JS614]
gi|119535420|gb|ABL80037.1| hydroxymethylbilane synthase [Nocardioides sp. JS614]
Length = 314
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 152/291 (52%), Gaps = 9/291 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK--G 62
P R+GTR S LA + L + + ++ +ST+GDR + GG G
Sbjct: 4 PLRVGTRASVLATTQSGLVADQLREALG---REVELVTVSTEGDRTQAAGIPLQGGSATG 60
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ GE+D AVHS KD+PT +G+ ++A RED RDV ++ +L +L
Sbjct: 61 VFVAALRDALLRGEVDVAVHSLKDLPTYPTEGITLAAVPVREDPRDVVVARDGLTLGELP 120
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ S +GT S RR A L + V+ RG ++TR+ K+ + + A++LA AG+ R+ +
Sbjct: 121 VGSRVGTGSPRRVAQLHALGLGLEVVGIRGNVDTRIGKVRSGECDAVILARAGLARIGRL 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + E+L+ P+PGQGA+ +E ++P A ++ ++ +V ERA LA L+G
Sbjct: 181 EAVTEVLDPLQMLPAPGQGALAVECRTDDPLAAQVAAALDDPRVRAAVTAERAVLATLEG 240
Query: 243 SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C + I A G L+ + L+ DG + S +G+ DA +G
Sbjct: 241 GCSAPIGALAEIVEGEDGDELWVRSVALSPDGALSVRRSASGSPSDAAGVG 291
>gi|153813574|ref|ZP_01966242.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174]
gi|149830319|gb|EDM85411.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174]
Length = 312
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 158/292 (54%), Gaps = 10/292 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LA+ + R + + H P ++ I+ + T GD+I +RTL ++GGKGLF +E
Sbjct: 12 IGSRESRLAVLQSEMVRDYIKEQH--PGLDVEILTMKTTGDKILDRTLDKVGGKGLFVKE 69
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHSV 126
++K L+ G +VHS KDMP ++ + L + A+ RED RDV + A SL L
Sbjct: 70 LDKALLEGRTMLSVHSLKDMPMEVPEDLPLLAFSRREDPRDVLVLPEGAASLDPL---KP 126
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+G SSLRR L D+ V RG ++TRL KL+ + ++LA AG+KRL EK I
Sbjct: 127 LGCSSLRRTLQLQTIYPDMKVKSIRGNLQTRLRKLDAGEYAGLILAAAGLKRLGLEKRIH 186
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++ P+ GQG + ++ H E + ED W + ERAF+ LDG C S
Sbjct: 187 RYFSADEILPAAGQGILAVQGHKG--LKYEYLSGYKDEDAWIAGTAERAFVRYLDGGCSS 244
Query: 247 AIAGFAYCKGSTLYFYGIVL-ASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+A F +G L+ G+ DG+ F + R G + +A +G A+ ++
Sbjct: 245 PVAAFGIVEGEELFLRGLYYREKDGRYFKDSIR-GPKTEAARLGMCLAEQMK 295
>gi|295839212|ref|ZP_06826145.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197695664|gb|EDY42597.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 314
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 155/279 (55%), Gaps = 14/279 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA E S L+ + P +I ++P++TK D+ L ++GGKGLF
Sbjct: 1 MRIGTRSSPLALAQ-VEQVSGLLRKFE-PDLDIEVVPVTTKADKWQG-DLAQLGGKGLFV 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
EI++ L G++D AVH KD+P + +GL +AYLPR+D+RDV + QSL
Sbjct: 58 REIDQMLQRGQVDMAVHCMKDVPGDVPMPRGLIFAAYLPRDDVRDVLLVPEGSDVQSLAG 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-----HAILLAYAG 175
L + + TS++RRKA + R R D++V+ RG + +R++KL+ K A++LA AG
Sbjct: 118 LPPGASVATSAVRRKAQINRVRPDLNVVRVRGLVGSRIDKLDGRKPMDHMLDAMVLARAG 177
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
++RL +++ + + P+ G GA+ +E ++ L++ +N E T + ER
Sbjct: 178 LERLDLMHRARQVFEVAEMLPAVGAGALGLECREDDDAVAYLLQQLNDEPTMTEITAERV 237
Query: 236 FLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIF 273
L L G C S IAG L G+V + DG F
Sbjct: 238 MLHGLRGHCNSPIAGHCVTDPDGQLSLRGMVFSRDGSKF 276
>gi|160897675|ref|YP_001563257.1| porphobilinogen deaminase [Delftia acidovorans SPH-1]
gi|160363259|gb|ABX34872.1| porphobilinogen deaminase [Delftia acidovorans SPH-1]
Length = 312
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 140/254 (55%), Gaps = 4/254 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L + H + ++ ++TKGD+I +RTL+++GGKGLF +E
Sbjct: 13 IATRESQLALWQAEHVQALL----RARGHEVELLGMTTKGDQILDRTLSKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G AVHS KD+P +L +G ++ + RED RD F+S+ +L +L +V+
Sbjct: 69 LEVALEEGRAHIAVHSLKDVPMELPEGFVLACVMEREDPRDAFVSNRYATLAELPQGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ALL R D+ + RG + TRL KL+ AI+LA AG+ RL I+
Sbjct: 129 GTSSLRRQALLQALRPDLKIEPLRGNVNTRLRKLDEGHYDAIVLAAAGLMRLGLADRIRA 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
P+ GQGA+ IE + + + + H+ TW +V ERA + GSC
Sbjct: 189 RFEPTGMLPAAGQGALGIEVRADRQDLIDALAPLAHQTTWLTVTAERAVSRCMGGSCSMP 248
Query: 248 IAGFAYCKGSTLYF 261
+A G L
Sbjct: 249 LAAHGTFDGRQLRL 262
>gi|116075276|ref|ZP_01472536.1| porphobilinogen deaminase [Synechococcus sp. RS9916]
gi|116067473|gb|EAU73227.1| porphobilinogen deaminase [Synechococcus sp. RS9916]
Length = 316
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 157/300 (52%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEQLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQ-S 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + AQ
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALAVNAKNAQYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LDTLPAGSVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ E + GQGA+ IE +P+ EL+KV+ H T ER+FL
Sbjct: 179 RLGFGDRIHQIIPSEISLHAVGQGALGIECVEGSPEVLELIKVLEHAPTAARCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I G TL G+V + DGK +G DA IG+ A ++
Sbjct: 239 RELEGGCQVPIGVNTVIDGDTLTLTGMVASLDGKRLIRDQASGTTADAEAIGKQLADTLK 298
>gi|238926756|ref|ZP_04658516.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531]
gi|238885288|gb|EEQ48926.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531]
Length = 289
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 128/210 (60%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
L+TKGDRI + L +IGGKGLFT+E+E+ ++ +D AVHS KDMPT++ GL I A
Sbjct: 19 LTTKGDRILDAPLAKIGGKGLFTKELEQAMLDDAVDLAVHSLKDMPTEVPDGLVIGAITT 78
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
R D D F+S +++DL + + +GTSSLRR+A LL R D+++ D RG + TRL KL+
Sbjct: 79 RLDPGDAFVSAHYAAVEDLPVGARVGTSSLRRRAQLLAVRPDLTICDLRGNVNTRLAKLD 138
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL E+ I+ IL P+ GQGA+ IE + ++ +
Sbjct: 139 AGEFDAIVLAAAGLKRLGFERRIRTILPRSVMLPAVGQGALAIECRAGDAAILSAIEFLR 198
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
+ ERAFL ++G C+ + +A
Sbjct: 199 DAGMTTAAQAERAFLRRVEGGCQIPVGVYA 228
>gi|146296661|ref|YP_001180432.1| porphobilinogen deaminase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|254800238|sp|A4XK06|HEM3_CALS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145410237|gb|ABP67241.1| hydroxymethylbilane synthase [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 290
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 151/294 (51%), Gaps = 6/294 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG R S L+ + I +P+ TKGD ++L + G+
Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTLGIECE---FVPIKTKGDIDKTKSLKDFKSPGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L
Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGVGFYQLKP 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 119 NAKIGTSSLRREVHLKNLRQDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ I ++ + P PGQGAICIE ++P L K IN D + ER L L G
Sbjct: 179 HVSYIFDVNEITPCPGQGAICIECLKDSPYKNILSK-INDADAYIQTQFERLVLKFLGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S+I F +Y + +L+ D I + S G++ D +++ + ++
Sbjct: 238 CHSSIGVFCKTDQDKIYAFASILSGDKLI--KASIEGDKDDFLSLANKLSNMLK 289
>gi|166367009|ref|YP_001659282.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843]
gi|166089382|dbj|BAG04090.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843]
Length = 319
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 159/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL
Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKD 120
FT+E+E ++ ID AVHS KD+PT L +GL + R + D + ++ L
Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDT 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL
Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I + L G+V + DGK + S +G+ +GRD A +R
Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVR 302
>gi|154505786|ref|ZP_02042524.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149]
gi|153793804|gb|EDN76224.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149]
Length = 295
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 158/292 (54%), Gaps = 8/292 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG+R S LA+ E ++ H P + I+ + T GDRI +R+L +IGGKG
Sbjct: 2 KTVIRIGSRESRLAVTQT-EIIKGQIEAH-FPHIRVEIVTMKTTGDRILDRSLEQIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L G +D +VHS KDMP + + L I AY RED RDV I Q+ +
Sbjct: 60 LFVKELDQALRKGRVDLSVHSLKDMPMDIPEDLPILAYSKREDPRDVLIFRQGQT--ESI 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+IGTSS RR+ L R D RG ++TRL KL A +LA AG+KRL +
Sbjct: 118 SGGMIGTSSKRRRLQLERLYPDCHFQGIRGNVQTRLRKLEEEGFCATVLAAAGLKRLGMD 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + E+ P+ GQG + ++ + QEL++V+N + + ERAF+ L+G
Sbjct: 178 SCIGRYFSCEEMIPAAGQGILAVQARAG--EYQELLEVLNDPRSEAAAKAERAFVKVLNG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVL-ASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S +A +A +GS + G+ SD F E + +GN+ +A +G A
Sbjct: 236 GCTSPVAAYAEIRGSKCHITGLYWRESDENWFVEKT-SGNKKEAELLGETLA 286
>gi|257459674|ref|ZP_05624783.1| porphobilinogen deaminase [Campylobacter gracilis RM3268]
gi|257443099|gb|EEV18233.1| porphobilinogen deaminase [Campylobacter gracilis RM3268]
Length = 309
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 145/265 (54%), Gaps = 7/265 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + +SL++ I + + TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IATRGSVLALWQSKHI-ASLLNARGIQAQ---LKSMKTKGDKILDTPLAKIGGKGLFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ GE AVHS KD+P + +GL ++A RED+RD IS +L + +
Sbjct: 62 LEESMLRGESHIAVHSLKDVPVEFPQGLVLAAICAREDVRDAMISEKYSKFDELPRGAKV 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK LL R D+ VI RG ++TRL KL + + AI+LA AGI RL +K
Sbjct: 122 GTTSLRRKMQLLSMRPDLEVISLRGNVQTRLRKLKDGEFDAIILAMAGINRLNLRAEVKH 181
Query: 188 I--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ I P+ GQGA+ IE V+ P+ ++ + E ER F+ L+G C+
Sbjct: 182 VAPFEISQMIPAMGQGALGIEA-VDEPQILRAIEFLKDERAIIETTVERDFVRVLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I A +G ++ IV DG
Sbjct: 241 VPIGINARLEGENIHISAIVGLPDG 265
>gi|167044207|gb|ABZ08888.1| putative Porphobilinogen deaminase, dipyromethane cofactor binding
domain protein [uncultured marine microorganism
HF4000_APKG5H11]
Length = 322
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 145/287 (50%), Gaps = 3/287 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LAL + L P + + T+GD L +G G+F
Sbjct: 18 IKVGSRGSTLALIQDHVVINRLK--ANSPALEFEVDTVRTRGDVDQTSRLAGMG-LGIFV 74
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E++L+ G++D AVHS KDMPT+L GL + A L RED RDV ++ L L +
Sbjct: 75 KELEQELLDGKLDIAVHSLKDMPTQLADGLVLGAVLSREDPRDVLVNRYGCPLDGLPKGA 134
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L ++ + V+ RG +ETRL K +A +LA AG+ RL + I
Sbjct: 135 KIGTSSPRRAAQLKQYAPQVEVVSIRGNVETRLRKAQGEEADGAILAAAGMIRLGLQDQI 194
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ F P PGQG + +E ++ + EL+ I+ DT ER FLA L G C
Sbjct: 195 AEYLSATQFVPPPGQGILAVEARADDFRMLELLSAIDDADTRYEATAERGFLARLGGGCS 254
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
+ +A C G + + +DG+ G + D + + DA
Sbjct: 255 IPVGAYARCNGDNIVMTIYMSTADGEKKFSAKIQGLKRDPLQLANDA 301
>gi|162449896|ref|YP_001612263.1| hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56']
gi|189028159|sp|A9FDP9|HEM3_SORC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|161160478|emb|CAN91783.1| Hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56']
Length = 300
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 6/288 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+ TR S LALA + SL +P ++ + + T GD+ +R+L +IGGKGLF +E
Sbjct: 7 LATRRSALALAQSRAFARSLE--AAVPDLSLRELEVVTSGDKTQDRSLQDIGGKGLFIKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ D AVHS KD+P ++ L ++ RED RD ++ + L +L + +
Sbjct: 65 LEEALLDRRADFAVHSIKDVPAEIAPALCLACIPAREDPRDALVTRSGALLAELPAGARV 124
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR L R D+ + RG ++TRL K+ + A++LA AG+KRL E E
Sbjct: 125 GTSSLRRAVALREARPDLVIEPVRGNVDTRLRKVFDGVFDAVVLALAGLKRLGLEARATE 184
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+ E P+ GQGA+ IE + ++++ + +T V+ ERA +A ++GSC++
Sbjct: 185 VLSPEVSLPAIGQGALGIECRTADDSVRDVLGTLADAETTICVSAERAVMAAVEGSCRTP 244
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRD 291
+A +A G L+ ++ DG R GN +A +G D
Sbjct: 245 VAAYAVRDGGALWLRALLAEPDGSRLRRAERRLSWPGNTREAERLGAD 292
>gi|54298727|ref|YP_125096.1| porphobilinogen deaminase [Legionella pneumophila str. Paris]
gi|61213295|sp|Q5X1F2|HEM3_LEGPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|53752512|emb|CAH13944.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Paris]
Length = 309
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 154/283 (54%), Gaps = 7/283 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPRFKSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG 280
G+C A YC + L VL DG + + G
Sbjct: 239 GGNCHIPFA--VYCTITAEKLLLLRAKVLNLDGSQMIDDEQQG 279
>gi|159026408|emb|CAO88937.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 319
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 159/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL
Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKD 120
FT+E+E ++ ID AVHS KD+PT L +GL + R + D + ++ L
Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSENQDYQLDT 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL
Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I + L G+V + DGK + S +G+ +GRD A +R
Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVR 302
>gi|157736544|ref|YP_001489227.1| porphobilinogen deaminase [Arcobacter butzleri RM4018]
gi|167008810|sp|A8ERI4|HEM3_ARCB4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157698398|gb|ABV66558.1| porphobilinogen deaminase [Arcobacter butzleri RM4018]
Length = 312
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 8/297 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL + +S L++ + P I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKSRLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++
Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L
Sbjct: 117 LPKGAIVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176
Query: 181 KEKVIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
E +K ++ + PS GQ + IET N+PK E++KV+N + ER+F+
Sbjct: 177 IENEVKYFSPISTDIMIPSMGQATLGIET-TNDPKVLEILKVLNDNNAHIESTVERSFVD 235
Query: 239 ELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L G C+ I A +++ IV DG + + D IG++ AQ
Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQ 292
>gi|329903547|ref|ZP_08273542.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480]
gi|327548285|gb|EGF32978.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480]
Length = 280
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 143/255 (56%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T+GD+I +RTL+++GGKGLF +E+E + G D AVHS KD+P +L G ++A+L
Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEVAIAEGRADLAVHSLKDVPMELPDGFMLAAFLE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL+ L +V+GTSSLRR+AL+ + + RG ++TRL KL+
Sbjct: 61 REDPRDAFVSNEYASLEALPAGAVVGTSSLRRQALIAARFPHLVIRPLRGNLDTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL + I+ L E P+PGQGA+ IE L+ ++
Sbjct: 121 RGEYAAIILAAAGLKRLGVPERIRMALEPEHSLPAPGQGAMAIEIKAGRTDLAALLAPLD 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H T +V ER GSC+ +A FA G L+ +V DG G
Sbjct: 181 HLATARAVQAERTLSRAFGGSCQIPLAAFAVVDGDQLHLRAMVATPDGVRVASAEARGPA 240
Query: 283 CDAINIGRDAAQYIR 297
+ +G+ A +R
Sbjct: 241 DNPEAVGQQVADALR 255
>gi|168214449|ref|ZP_02640074.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969]
gi|170714079|gb|EDT26261.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969]
Length = 291
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 160/289 (55%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF +E
Sbjct: 5 IATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I
Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR L +R D+ ++ RG I+TR+ K+ I+LA AG+KRL E+VI +
Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNIQTRIKKITEENLDGIILAAAGLKRLGMEEVISD 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C S
Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I
Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287
>gi|253680789|ref|ZP_04861592.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873]
gi|253562638|gb|EES92084.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873]
Length = 300
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 160/294 (54%), Gaps = 8/294 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + P N I +STKGDRI + L +IGGKGLF +E
Sbjct: 5 VGSRGSKLALTQTNWVIDKIKQNN--PQLNFEIKIISTKGDRIQHMLLDKIGGKGLFVQE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFI-SHTAQSLKDLALHS 125
IE++LISG+ID AVHS KDM T + + L+ S Y+P RED RDV I + +S+ +L +
Sbjct: 63 IEEQLISGQIDLAVHSMKDMSTDIPEELKFS-YVPIREDYRDVLILNKKYKSIDELPKGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
IGT S RRK LL +R+D+ V+ RG ++TR+ K+ I+LA AGIKRL E K+
Sbjct: 122 KIGTGSKRRKYQLLDYRTDLKVVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLEDKI 181
Query: 185 IKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +E PSP QG + +E + ++K I H+ + ERAFL ++G
Sbjct: 182 DYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEHKASTIQAEAERAFLKGVNG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C I +T+ G++ DG + G+ +A +G + A+ I
Sbjct: 242 GCHVPIGALCNINKNTIEVTGLLGKEDGSKIIRKTLVGSIDEAEYVGYELAKII 295
>gi|161831110|ref|YP_001595911.1| porphobilinogen deaminase [Coxiella burnetii RSA 331]
gi|189028089|sp|A9N910|HEM3_COXBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|161762977|gb|ABX78619.1| porphobilinogen deaminase [Coxiella burnetii RSA 331]
Length = 307
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 159/297 (53%), Gaps = 6/297 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59
++K+ I TR SPLAL A + + + H PH I+ +T+GDR+T L + G
Sbjct: 2 IKKRSILIVTRKSPLALWQAEFVKQQIENSH---PHLACQILGCTTQGDRLTTEKLVDSG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GK LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L
Sbjct: 59 GKDLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLI--VKGELS 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 117 TLPPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRL 176
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +
Sbjct: 177 GLENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEK 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C + IA A K + ++ DG++ + GN +A IG A +
Sbjct: 237 LGGDCFTPIAAHAIIKNDQFSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQL 293
>gi|149194367|ref|ZP_01871464.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2]
gi|149135542|gb|EDM24021.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2]
Length = 295
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 148/247 (59%), Gaps = 12/247 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A + L ++ H + + ++T GD+I ++ L IGGKGLF +E
Sbjct: 5 IATRGSKLALWQAEWVKKRLENLG----HEVDLKIVTTTGDKILDKPLASIGGKGLFIKE 60
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKG-LQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
+E+ L+ GE AVHS KD PT+ K ++A RE + DVF+S T ++L +L ++V
Sbjct: 61 VEEALLRGEAQIAVHSLKDFPTEYNKEHFTLAAVPKREAVEDVFLSETFETLAELPHNAV 120
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSS+RR L +R D+ + D RG ++TR+NKL + AI+LAYAG+KRL K +K
Sbjct: 121 VGTSSIRRAMQLKAFREDLVISDLRGNVDTRINKLKKGEYDAIILAYAGVKRLNLIKEVK 180
Query: 187 --EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD--SVNCERAFLAELDG 242
EIL+ + P+ GQGA+ IET + + K E VK +N D W V ER F+ EL+
Sbjct: 181 YFEILDTDIMIPAMGQGALGIET-IKDEKVIEAVKPLN--DLWTKIEVTIERDFIDELNL 237
Query: 243 SCKSAIA 249
C + +
Sbjct: 238 GCHAPVG 244
>gi|164687765|ref|ZP_02211793.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM
16795]
gi|164603539|gb|EDQ97004.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM
16795]
Length = 298
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 153/290 (52%), Gaps = 3/290 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL L + + II TKGD I + L +IG KGLF +E
Sbjct: 5 VGTRGSNLALVQTNWVVDQLKKENPGVEFEVKII--KTKGDLIKDLPLDKIGDKGLFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHSV 126
IEK L+ GEID AVHS KDMP+ L +GL+ + RED RD I +SL DL +
Sbjct: 63 IEKSLLDGEIDMAVHSMKDMPSYLPEGLKFAHSPKREDPRDALIFKEGYKSLDDLPQGAR 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK LL+ R D+ ++ RG IETR+ K+ K ++LA +G++R + I
Sbjct: 123 IGTGSKRRKYQLLKHRPDLEIVPIRGNIETRIKKIETEKLDGVVLAASGLRRAGLDDKID 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ + P+P QG + +E ++ + ++++ I + T ++ ER FL ++GSC
Sbjct: 183 YYIPTDIMLPAPAQGILALEIREDDKETEKIIDSIKDDITKIQIDAERGFLIGVNGSCHI 242
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + +G + G+ +GK S+ G DA IG + A+ +
Sbjct: 243 PMGAYCEIEGEKITLTGLYGDGEGKKIVVQSQVGTLADAPKIGYELAKSV 292
>gi|257092424|ref|YP_003166065.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044948|gb|ACV34136.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 315
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 146/270 (54%), Gaps = 4/270 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A L +++ P + I+ ++T+GD+I +R L IGGKGLF +E
Sbjct: 13 IASRESRLAMWQAQHVSGRLTELY--PQTAVDILGMTTRGDQILDRPLAAIGGKGLFIKE 70
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G D AVHS KD+P ++ +G ++A RE+ D F+S+ L +L ++V+
Sbjct: 71 LEVAMQQGRADLAVHSMKDLPMEMPEGFALAAISVRENPCDAFVSNRFGGLAELPANAVV 130
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + + RG ++TRL KL+ AI+LA AG+ RL IK
Sbjct: 131 GTSSLRREAMLRAGYPQLEIRSLRGNLDTRLRKLDAGDYDAIILAAAGLIRLGLTDRIKA 190
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L E P+PGQG + IE LV +N T V ERAF L GSC+
Sbjct: 191 VLTPEQSLPAPGQGVLGIEVLSARVDLLTLVAPLNDVATAHCVRAERAFSRALGGSCQIP 250
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+A A L+ G + DG+ H +S
Sbjct: 251 LAAHAVLDSGALWLRGWIATPDGR--HSLS 278
>gi|209147746|gb|ACI32904.1| Porphobilinogen deaminase [Salmo salar]
Length = 359
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA L ++ P +I I+ ++T GD+I + L++IG K LFT
Sbjct: 19 IRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGMTTTGDKILDTALSKIGEKSLFT 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE+ D + H +SL L
Sbjct: 77 KELETALERNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPQNMGKSLDTLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++R+
Sbjct: 137 DKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKGDFSAIILAAAGLRRMGW 196
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + +IL ED + GQGAI IE + E+V V++ +T ERAFL L+
Sbjct: 197 ESRVSQILGPEDCMYAVGQGAIAIEVRAKDKDILEMVSVLHDPNTVLRCIAERAFLRRLE 256
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K S LY G V + DG
Sbjct: 257 GGCSVPVAVHTEVKDSQLYLTGAVYSLDG 285
>gi|256827644|ref|YP_003151603.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641]
gi|256583787|gb|ACU94921.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641]
Length = 313
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 142/253 (56%), Gaps = 3/253 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K IGTR S LAL A + R+ + P + + + TKGD+I + L++IG
Sbjct: 1 MTDKTITIGTRGSKLALWQAEKVRALIQ--ATFPEVHCAVKVIRTKGDKILDVALSKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLK 119
KGLFT+E+E+ L+ GE+D VHS KDMPT L KGL I+ R DV + S +L
Sbjct: 59 KGLFTKELERCLLEGEVDVCVHSMKDMPTVLPKGLFIAGVTERAYPNDVIVASAKGLTLS 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + + T SLRR A L R R D++ + RG I+TR+ ++ + A +LA AG+ RL
Sbjct: 119 DLPAGARVATGSLRRVAQLARLRPDVTACEIRGNIDTRIGRVLAGEFDAAILAAAGLYRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E+ I ++ E+ P+ GQGAI +E ++ + L I+H+ T +V ER +
Sbjct: 179 GLEEQISSLIPTEEMIPAVGQGAIALEARADDREVAHLCTAISHQPTLRAVEAERYIMRA 238
Query: 240 LDGSCKSAIAGFA 252
L+G C+ + +A
Sbjct: 239 LEGGCQVPMGAYA 251
>gi|93004929|ref|YP_579366.1| porphobilinogen deaminase [Psychrobacter cryohalolentis K5]
gi|92392607|gb|ABE73882.1| hydroxymethylbilane synthase [Psychrobacter cryohalolentis K5]
Length = 345
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 145/250 (58%), Gaps = 2/250 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLAL A R+ L+ ++ P I ++ + TKGD+I + L +IGGKGLF
Sbjct: 12 LNIATRQSPLALWQAEHIRNRLLALY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLFV 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L +
Sbjct: 70 KELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIAELPQGA 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT+SLRR+ + +R D+ + RG + TRL+KL+ + AI+LA +G+KR++ + I
Sbjct: 130 VVGTASLRRQCQIKAYRPDLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLKRIELDARI 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+I P+ GQGA+ IE ++ +L+ +N + + ERA L G C+
Sbjct: 190 RSELDINICLPAVGQGALAIECREDDADVLKLLAPLNDDKARIRLIAERALNRHLQGGCQ 249
Query: 246 SAIAGFAYCK 255
IA +A +
Sbjct: 250 VPIAAYAVLQ 259
>gi|325981153|ref|YP_004293555.1| porphobilinogen deaminase [Nitrosomonas sp. AL212]
gi|325530672|gb|ADZ25393.1| porphobilinogen deaminase [Nitrosomonas sp. AL212]
Length = 318
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A + L +++ P I I+ ++T+GD+I +++L++IGGKGLF +E
Sbjct: 13 IASRESLLAMWQAKFIQKCLSELY--PQTEISILGMTTRGDQILDQSLSKIGGKGLFIKE 70
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L G D AVHS KDMP + +G +++A RED RD F+S+ SL L S++
Sbjct: 71 LEQALEDGRADIAVHSMKDMPMNVPEGFKLAAITEREDPRDAFVSNHHASLDVLPAGSIV 130
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + V RG ++TRL KL+ ++ AI+LA AG+KRL+ I
Sbjct: 131 GTSSLRRESQLRAHFPLLQVQPLRGNVQTRLRKLDEDQYAAIILAAAGLKRLELSNRITA 190
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+LN E P+ GQGA+ IE + +L++ ++H+ T V ER+ L GSC+
Sbjct: 191 LLNPEQSLPAVGQGALGIECRADRMDLIQLMQPLHHQATAYCVEAERSMSRVLGGSCQVP 250
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ FA L G V DGK + G I +G+ AQ +
Sbjct: 251 LGAFAEIDNDKLRLRGFVAQPDGKRIVSGALEGKPETGIAMGQQLAQKL 299
>gi|315635705|ref|ZP_07890968.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22]
gi|315480002|gb|EFU70672.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22]
Length = 312
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 8/297 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL + ++ L++ + P I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKARLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++
Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L
Sbjct: 117 LPKGAVVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176
Query: 181 KEKVIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
E +K ++ + PS GQ + IET N+PK E++KV+N + ER+F+
Sbjct: 177 IENEVKYFSPISTDVMIPSMGQATLGIET-TNDPKVLEILKVLNDNNAHIESTIERSFVD 235
Query: 239 ELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L G C+ I A +++ IV DG + + D IG++ AQ
Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQ 292
>gi|296534852|ref|ZP_06897187.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
gi|296264818|gb|EFH11108.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
Length = 304
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 155/309 (50%), Gaps = 14/309 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R G+R SPLAL R + M + + + +PLST GD R L E+GGKGLF
Sbjct: 1 PLRAGSRASPLAL------RQTAMVLAALGETPCLTVPLSTSGDAEPRRRLAELGGKGLF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHTAQS 117
+EI + L+ G ID AVHS KD+ T+L GL I+A LPRED RD + A
Sbjct: 55 AKEIHEALLDGRIDFAVHSLKDLETELPPGLVIAACLPREDARDALLLAPACPPEERALP 114
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L + + IGT+S RR A L R D+ RG ++TRL++L A LLA AG+K
Sbjct: 115 LGFLPVGARIGTASARRAAQLRHLRPDLRFGLLRGNVQTRLHRLEQGDFAATLLAMAGLK 174
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL IL+ E+ P+ GQG I I N +E + I+H T + ERA L
Sbjct: 175 RLDLAARASRILSPEEMLPAAGQGVIAITARAGNEALREKLAGIDHAATRLAAAAERALL 234
Query: 238 AELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A L+GSC++ + A L+ G+V DG +G +A IG +
Sbjct: 235 AALEGSCRTPVGAHATLDAEGRLHLTGLVAREDGTFLLRRRLSGPASEAARIGATLGAEL 294
Query: 297 RFISNKNVF 305
R S ++
Sbjct: 295 RADSPADLL 303
>gi|161486849|ref|NP_781392.2| porphobilinogen deaminase [Clostridium tetani E88]
Length = 290
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 148/268 (55%), Gaps = 11/268 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVI---IPLSTKGDRITNRTLTEIGGKGLF 64
+ TR S LA +T++ L+ + KI N V + + T GD+I +RTL +IGGKGLF
Sbjct: 5 VATRRSILA-----QTQTDLV-IKKIEEDNEVKCEKLLIQTLGDKILDRTLDKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK L+ G+ AVHS KD+P ++ I A RED+RD F+S +L
Sbjct: 59 IKEIEKALLDGKAHMAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGTSS RR + + R D+ V+ RG ++TRL K+ +LA AG+KRL E+V
Sbjct: 119 SKIGTSSRRRSSQIKILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEV 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + E+ P+ GQGA+ IE + +K I+HE+T V ER+F+ L G C
Sbjct: 179 ITDYFSPEEMVPAIGQGALGIEIK-KYEDVIDYIKGIDHEETRICVEGERSFMEALKGDC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272
S I A + +Y GI +GKI
Sbjct: 238 HSTIGAHAIVENDLMYMTGI-FEVNGKI 264
>gi|182626954|ref|ZP_02954686.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721]
gi|177907690|gb|EDT70308.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721]
Length = 291
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 160/289 (55%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF +E
Sbjct: 5 IATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I
Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI +
Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + F P+ GQGA+ IE + + + K ++ ++ +V+ ER+F+ L+G C S
Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNDYFKALDSKEVRTTVDAERSFMKVLNGGCHSL 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I
Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287
>gi|56476047|ref|YP_157636.1| porphobilinogen deaminase [Aromatoleum aromaticum EbN1]
gi|56312090|emb|CAI06735.1| Porphobilinogen deaminase [Aromatoleum aromaticum EbN1]
Length = 314
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 153/298 (51%), Gaps = 2/298 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF +E
Sbjct: 15 IATRESRLALWQAEHVKARLEALY--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFVKE 72
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ D AVHS KD+P +L + + RE D F+S SL D+ +V+
Sbjct: 73 LEAALLEERADIAVHSMKDVPMQLAEPFALPCISAREVPLDAFVSPRYASLADMPPGTVV 132
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG++RL I+
Sbjct: 133 GTSSLRRESQLHAQFPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLRRLGLADRIRA 192
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L E P+ GQGA+ IE + +N DT V ERA L GSC+
Sbjct: 193 ELPSEVSLPAAGQGALGIECLAKRTDIAAWLAPLNDADTSACVRAERAVARALAGSCEVP 252
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + L+ G V DG R G+ DA +G A +R +++
Sbjct: 253 LGAYAEIRAGRLWLRGFVALPDGSRMVRAEREGDAADAEGLGLALADDLRAQGAEDIL 310
>gi|257470630|ref|ZP_05634720.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
Length = 306
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 143/259 (55%), Gaps = 4/259 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGGKGLFT 65
IG+R S LA+A + + L + P I + T GD ++N ++ K FT
Sbjct: 14 IGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSLKSFFT 71
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L +L +
Sbjct: 72 KEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTLMELPAGA 131
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR+ EK I
Sbjct: 132 IVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKRVGLEKEI 191
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F DG C
Sbjct: 192 TEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSKIFDGGCH 251
Query: 246 SAIAGFAYCKGSTLYFYGI 264
+ + G + GI
Sbjct: 252 TPMGCHCILDGDKITLTGI 270
>gi|238916686|ref|YP_002930203.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750]
gi|259647796|sp|C4Z552|HEM3_EUBE2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238872046|gb|ACR71756.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750]
Length = 295
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 137/251 (54%), Gaps = 6/251 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+RIGTR S LAL + + + + + P ++ + T GD++T++ L IG KG F
Sbjct: 3 YRIGTRGSKLALVQSEYVKRRMEEAY--PEDTFELVIIKTTGDKVTDKPLAAIGTKGFFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+SG ID AVHS KDMP + GL + RED RDV I TA S +L +
Sbjct: 61 KEIEEALLSGSIDMAVHSMKDMPAECAAGLTFAKAWKREDCRDVLILKTAGSFSELPSGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEK 183
VIGT SLRR L R DI RG ++TR+NKL ++ I+LA AG+ RL +
Sbjct: 121 VIGTGSLRRACQLAMLRPDIQFTAIRGNVDTRINKLMDDSYGLDGIVLAAAGLNRLGRSS 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L+ E P+P QG + IET N + + + ++ +++ ER FL G
Sbjct: 181 EITEYLDPEVVIPAPAQGVLAIETAEVNTELLDKINALSDDNSDREAVAERTFLRLTGGG 240
Query: 244 CKSAIAGFAYC 254
C + + A+C
Sbjct: 241 CHAPVG--AHC 249
>gi|284006594|emb|CBA71855.1| porphobilinogen deaminase [Arsenophonus nasoniae]
Length = 297
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 141/273 (51%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P I +IP+ST+GD + + L +IGGKGLF +E+E L+ D AVHS KD+P
Sbjct: 16 PTLTIELIPMSTQGDILLDTPLAKIGGKGLFVKELENALLENRADIAVHSIKDIPATFPN 75
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
L + A R D RD F+S+ SL L S+IGTSSLRR+ L + + D RG
Sbjct: 76 NLGLMAICQRGDPRDAFVSNQYDSLDALPAGSIIGTSSLRRQCQLRHTYPHLVIQDLRGN 135
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + I+LA AG+KRL E I+ L E P+ GQGAI IE +++
Sbjct: 136 VGTRLSKLDNGQYDGIILAVAGLKRLNLETRIRMPLPPEHSLPAVGQGAIGIECRLDDHH 195
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
Q + ++H DT + ER L G C+ I +A + ++ +V DG
Sbjct: 196 TQHFLAPLHHHDTAICIQAERTVNNRLQGGCQVPIGSYAIWQNKQIWLRALVGTPDGSQI 255
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
R+ DA + + A+ + K + N
Sbjct: 256 IRGERSFKPEDAQQMSIELAEELLNNGAKQILN 288
>gi|291612739|ref|YP_003522896.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1]
gi|291582851|gb|ADE10509.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1]
Length = 314
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 154/263 (58%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + TL++IGGKGLF +E
Sbjct: 14 IASRESALAMWQAEHIRDRLRALY--PQTSVSILGMTTQGDQILDVTLSKIGGKGLFVKE 71
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L +G D AVHS KD+P L +G ++ RED RD F+S+ +L L SV+
Sbjct: 72 LETALENGSADIAVHSLKDVPMNLPEGFALACIGEREDPRDAFVSNRFDNLAALPAGSVV 131
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 132 GTSSLRRESQLRARFPHLKIEPLRGNVQTRLRKLDEGQYAAIILAAAGLKRLGLGERIRA 191
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+++ ++ P+ GQGA+ IET + P + ++ ++H DT V ERA L GSC+
Sbjct: 192 VISSDESLPAVGQGALGIETRADRPDLKAVLAPLHHADTAACVLAERAMSRALAGSCQVP 251
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+ GFA + L G V DG
Sbjct: 252 LGGFAEVQNGKLRMRGFVATPDG 274
>gi|269128634|ref|YP_003302004.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183]
gi|268313592|gb|ACY99966.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183]
Length = 311
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 161/298 (54%), Gaps = 13/298 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S +A ++R ++ ++ H + ++ ++T+GD I+ L ++GG G+F
Sbjct: 4 LRLGTRKSLMA---TTQSRRVGDELTRLTGHAVELVGVTTEGD-ISRAHLAQMGGTGVFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ KLISGE+D AVHS KD+PT +G+ ++A R+D RD L DL +
Sbjct: 60 SALRDKLISGEVDFAVHSLKDLPTAPAEGITLAAVYRRDDPRDALCGPL--KLADLPRGA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L R D+ ++ RG +TRL K+ + + A++LAYAG+ R+ + +
Sbjct: 118 RVGTGSPRRVAQLRALRGDLEIVPIRGNADTRLRKVADGELDAVVLAYAGLGRIGRRDAV 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ + D P+PGQGA+ +E + EL+ ++H T +V ER LA L+ C
Sbjct: 178 VEVFDPADMLPAPGQGALALECRSDRLDLIELLATVDHAPTRAAVTAERTVLAVLEAGCS 237
Query: 246 SAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYI 296
+ + +A + S +L+ V DG +S +G+ A IGR+ AAQ +
Sbjct: 238 APVGAYATVEDSAEEEQPSLHLSACVAGIDGARQVRLSGSGHPERAEEIGRELAAQLL 295
>gi|311895732|dbj|BAJ28140.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 323
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 169/307 (55%), Gaps = 17/307 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR SPLALA ++L + +P +P++T+ D + L ++GGKGL
Sbjct: 9 RTLRIGTRSSPLALAQTDMVVAALRE--HVPDLVAETVPVTTEAD-LWQGDLAQLGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
+T++I+ L +G +D AVH KD+P L +GL +AY+ R D+RDV + ++L
Sbjct: 66 YTKQIDAMLQAGAVDMAVHCVKDVPGDVPLPRGLVFAAYMERPDVRDVLLFPEGSGYRTL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-----AHAILLAY 173
DL +VI +S++RRKA +LR R D+ V+ RG + +RL KL+ K A ++LA
Sbjct: 126 ADLPPGAVILSSAVRRKAQILRARPDLEVVRVRGAVGSRLEKLDGAKQIDVHADGMVLAA 185
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ RL E+ +L++++ P+ G G + +E +P L++ INH T V E
Sbjct: 186 AGLARLGIERP-GYVLSMDEMLPAVGAGVLGLECRQGDPATAALLEKINHPRTQREVTAE 244
Query: 234 RAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIF-HEVSRNGNRCDAINIG-R 290
R L L G C S IAG+ + L G+V +G F + + N +R D +G R
Sbjct: 245 RVLLHNLRGHCNSPIAGYCTTEPDGQLSLRGMVFDREGSKFANAMLWNEHRQDPATLGAR 304
Query: 291 DAAQYIR 297
AA+ +R
Sbjct: 305 VAAELLR 311
>gi|91773206|ref|YP_565898.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242]
gi|121684353|sp|Q12WM8|HEM3_METBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|91712221|gb|ABE52148.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242]
Length = 309
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 12/289 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LA+A A L + N++ T GD T+R L E+ G G+F E
Sbjct: 3 LGTRGSALAIAQADLVTKMLEEKGHELTRNVI----KTSGDVFTDRPLHEVAGVGVFVRE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ ++I GE+D AVHS KD+PT L I+A L R+ DV ++ +L +L ++I
Sbjct: 59 LDDRMIEGEVDIAVHSMKDLPTVRPPELAIAAVLKRDSPYDVLLTADGSTLDELPDGAII 118
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+S+RR+A LLR+R D++V D RG I TR+ KL + ILLA AG++R+ + ++
Sbjct: 119 GTTSMRRRAQLLRYRPDLNVEDLRGNINTRIQKLKAGQYDGILLAEAGLQRMGWDMDVQR 178
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L E F PS QG I + T ++ +A+ V+NHE + ER + +++G C
Sbjct: 179 -LPAEAFCPSANQGTIVVVTRADD-EAERACSVLNHERSRMETEVERLLITDVEGGCIVP 236
Query: 248 IAGFAYC--KGSTLYFYGIVLASDG----KIFHEVSRNGNRCDAINIGR 290
I FA G ++ VLA DG +I ++ R A++IGR
Sbjct: 237 IGSFAQMNEDGDEIHVLVEVLAVDGTREIRIEDDIPVKNYREHALSIGR 285
>gi|16330297|ref|NP_441025.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803]
gi|2495177|sp|P73660|HEM3_SYNY3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|1652786|dbj|BAA17705.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803]
Length = 320
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 156/295 (52%), Gaps = 5/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL + + L P + + T+GD+I + L +IG KGLFT
Sbjct: 10 VRIGSRKSQLALVQTYWVQEELQ--KHFPDRQFDVETMETQGDKILDVALAKIGDKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E ++ D AVHS KD+PT L GL + R + D + H + L L
Sbjct: 68 QELEDGMLGKRTDLAVHSLKDLPTNLPAGLMLGCVTKRVNPADALVLNAKHQGKDLASLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L ++ D RG + TRL KL++N+ AI+LA AG++RL
Sbjct: 128 EGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDSNEYDAIILAAAGLERLDMA 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +++ E + GQGA+ IE + + L+KV+ E++ D ERAFL +L+G
Sbjct: 188 NRIDQLIPPEISLHAVGQGALGIECREGDQEILSLLKVLEDENSRDRCLAERAFLRQLEG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ I + G L G+V + DG+ + + + R +A +G+D A +R
Sbjct: 248 GCQVPIGVNTHLDGDNLTLTGMVASLDGQRLIKDTLSAPRKEAEKLGQDLALKLR 302
>gi|239814381|ref|YP_002943291.1| porphobilinogen deaminase [Variovorax paradoxus S110]
gi|239800958|gb|ACS18025.1| porphobilinogen deaminase [Variovorax paradoxus S110]
Length = 308
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 139/248 (56%), Gaps = 4/248 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF +E
Sbjct: 13 IATRESRLALWQAEHVQALLQERG----HAVSLLGMTTRGDQILDKSLSKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++ L RED RD +S SL +L +V+
Sbjct: 69 LELALEEGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDALVSPRHASLDELPQGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL E I+
Sbjct: 129 GTSSLRRVVLLRALRPDLRIEPLRGNLDTRLRKLDQGHYDAIVLAAAGLKRLGLEHRIRV 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + P+ GQGA+ IE + L+ ++H W + ERA + GSC
Sbjct: 189 AFDPDTMLPAAGQGALGIEVRADRTDLIALLAALSHSRDWLATAAERAVSRSMGGSCSMP 248
Query: 248 IAGFAYCK 255
+A A +
Sbjct: 249 LAAHARWQ 256
>gi|302870086|ref|YP_003838723.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029]
gi|315503637|ref|YP_004082524.1| porphobilinogen deaminase [Micromonospora sp. L5]
gi|302572945|gb|ADL49147.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029]
gi|315410256|gb|ADU08373.1| porphobilinogen deaminase [Micromonospora sp. L5]
Length = 328
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 17/314 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + +L P + ++ + T GDR T + G G+F
Sbjct: 4 PLRLGTRGSALAMAQSGHVAEALTAATGRP---VELVEVVTAGDRSTAPV--QRLGVGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L +GEID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALTAGEIDFAVHSYKDLPTAAAPGLHVAAVPPRQDPRDALVATNGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKE 182
+ +GT +LRR A L + V RG ++TRL ++ A A++LA AG+ R+ +
Sbjct: 119 ARVGTGALRRIAQLHALGMQLEVSPIRGNVDTRLGRVLGPDADLDAVVLARAGLNRIGRA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+P QGA+ +E ++ EL+ +++H + ++ ERA LA L+
Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDQDVIELLALLDHAPSRAAITAERALLATLEA 238
Query: 243 SCKSAIAGFAYCK----------GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
C + +A +A +Y G V++ DG +SR G DA IG+
Sbjct: 239 GCSAPVAAYAVLAEGEPTDEGDVNQEIYLRGAVISPDGTRDLRLSRTGTPADAAEIGKAL 298
Query: 293 AQYIRFISNKNVFN 306
A + + ++
Sbjct: 299 AAELLELGADSILG 312
>gi|320006816|gb|ADW01666.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331]
Length = 311
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PDTVTEVVPVRTTGDKWLG-DLSKVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L+ L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLEQLPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA AG+ R+ +
Sbjct: 124 GTRIGTSSVRRTAQLASSHPHLDCVPFRGNANRRLAKLAAGEADALLLAVAGLHRIGRPD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI +IL E P G G + ++ ++ E V +NH T+ + ER FL L G
Sbjct: 184 VISDILAPETMCPPIGAGVLALQCREDDTATIEAVGALNHPGTYREITAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG+A + L V DGK D +G A
Sbjct: 244 CNSPIAGYATAHRNGDLSLRACVFTPDGKTVLNAHEWAGPLDPATLGTSVA 294
>gi|78185247|ref|YP_377682.1| porphobilinogen deaminase [Synechococcus sp. CC9902]
gi|123770934|sp|Q3AWQ4|HEM3_SYNS9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78169541|gb|ABB26638.1| hydroxymethylbilane synthase [Synechococcus sp. CC9902]
Length = 317
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H +
Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + + GQGA+ IE N P E++KV+ H T ERAFL
Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENQPDVMEIIKVLEHGPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G D +IG + A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREQASGPSTDPESIGLELAATLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 GLGAGEIL 306
>gi|113478006|ref|YP_724067.1| porphobilinogen deaminase [Trichodesmium erythraeum IMS101]
gi|110169054|gb|ABG53594.1| hydroxymethylbilane synthase [Trichodesmium erythraeum IMS101]
Length = 320
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 153/297 (51%), Gaps = 9/297 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL + + L P + +ST+GD+I + L +IG KGLFT
Sbjct: 10 IRIGSRKSQLALIQTYWVQEKLE--KNFPNITFEVHKMSTQGDKILDVALAKIGDKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ E D AVHS KD+PT L +GL + RE+ D + H + LKD L +
Sbjct: 68 KELELGMLQNETDLAVHSLKDLPTNLPEGLILGCVTERENPADALVLH--EKLKDKQLET 125
Query: 126 -----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
VIGTSSLRR A L + D RG + TRL KL+ + A++LA+AG+ RL
Sbjct: 126 LPEGAVIGTSSLRRLAQLRYHFPHLEFKDVRGNLNTRLAKLDAGEYDALILAFAGLHRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +I+ E + GQGA+ IE + L+K + H T ERAFL EL
Sbjct: 186 MSDRIHQIIPPEISLHAVGQGALGIECRAGDNNILNLLKSLEHTATAQRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I +G L G+V + DGK + G DA IG + AQ +R
Sbjct: 246 EGGCQVPIGVNTQIEGEQLTLTGLVASLDGKKLVKDIVTGATADAEQIGIELAQKLR 302
>gi|255322661|ref|ZP_05363805.1| porphobilinogen deaminase [Campylobacter showae RM3277]
gi|255300222|gb|EET79495.1| porphobilinogen deaminase [Campylobacter showae RM3277]
Length = 311
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 146/272 (53%), Gaps = 7/272 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK +I TR S LA+ + R ++ + P + + + TKGD I + L +IGG
Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKIL--SRYPQIAVELTGMKTKGDVILDTPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D
Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL
Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176
Query: 181 KEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ I+ ++ P+ GQGA+ IE + + L++ + E ER F+A
Sbjct: 177 LRSEVAHIVPFELDQMVPAMGQGALGIEAR-EDSEILNLIEFLKDEKAVIETTVERDFVA 235
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+G C+ I A G + +V DG
Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDG 267
>gi|238028332|ref|YP_002912563.1| Porphobilinogen deaminase [Burkholderia glumae BGR1]
gi|237877526|gb|ACR29859.1| Porphobilinogen deaminase [Burkholderia glumae BGR1]
Length = 322
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 149/258 (57%), Gaps = 2/258 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL +L S++
Sbjct: 74 LETALADGRADLAVHSLKDVPMSLPEGFALTAVMRREDPRDAFVSNDYASLDELPTGSIV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L DI V RG ++TRL KL+ AI+LA AG+KRL + I+
Sbjct: 134 GTSSLRREAMLRARYLDIDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDARIRS 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ +E PP+ GQGA+ IE + + ++ T + ER L GSC+
Sbjct: 194 LIEVEASPPAAGQGALGIEIAAARAELARWLAPLHDPATALACEAERMVSRALGGSCEVP 253
Query: 248 IAGFAYCKGSTLYFYGIV 265
+A A G L G V
Sbjct: 254 LAAHAVWDGDVLQLTGRV 271
>gi|78778881|ref|YP_396993.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9312]
gi|123741491|sp|Q31C38|HEM3_PROM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78712380|gb|ABB49557.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. MIT
9312]
Length = 316
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 159/296 (53%), Gaps = 5/296 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LA+ + L IP + I ++T+GD+I + L +IG KGLFT
Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--KNIPNLEVSIEAMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +++ G+ D AVHS KD+PT L GL++ RED D + + L+ L
Sbjct: 64 KELEAQMLVGQADIAVHSLKDLPTNLPSGLKLGCITKREDPADALVVSKKNDCYKLETLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A L ++ D RG + TR+ KL+ + I+LA AG+KRL E
Sbjct: 124 AGSIVGTSSLRRLAQLRNKYPHLNFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL EL+G
Sbjct: 184 SRIHQIIPNEISLHAVGQGALGIECKSDDKKVLEIISVLEDKPTSQRCLAERAFLRELEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C+ I + + LY G+V + DG+ + GN D +G++ A+ ++
Sbjct: 244 GCQVPIGVNSSIQNEQLYLTGMVASLDGERLIKDQYIGNIDDPEQVGKELAKKLKL 299
>gi|110800724|ref|YP_696126.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124]
gi|169347253|ref|ZP_02866192.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495]
gi|123344731|sp|Q0TQG4|HEM3_CLOP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4239996|dbj|BAA74781.1| hydroxymethylbilane synthase [Clostridium perfringens]
gi|110675371|gb|ABG84358.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124]
gi|169296649|gb|EDS78780.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495]
Length = 291
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF +E
Sbjct: 5 IATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I
Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI +
Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C S
Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I
Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287
>gi|223040967|ref|ZP_03611228.1| porphobilinogen deaminase [Campylobacter rectus RM3267]
gi|222877764|gb|EEF12884.1| porphobilinogen deaminase [Campylobacter rectus RM3267]
Length = 309
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 146/272 (53%), Gaps = 7/272 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK +I TR S LA+ + R ++ + P + + + TKGD I + L +IGG
Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKIL--SRYPELAVELTGMKTKGDVILDTPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D
Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL
Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176
Query: 181 KEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ I+ ++ P+ GQGA+ IE + + L++ + E ER F+A
Sbjct: 177 LRSEVAHIVPFELDQMIPAMGQGALGIEAR-EDAEILNLIEFLKDEKAVIETTVERDFVA 235
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+G C+ I A G + +V DG
Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDG 267
>gi|17547076|ref|NP_520478.1| porphobilinogen deaminase [Ralstonia solanacearum GMI1000]
gi|24211753|sp|Q8XWW3|HEM3_RALSO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|17429377|emb|CAD16064.1| probable porphobilinogen deaminase (pbg)
(hydroxymethylbilanesynthase) (hmbs)
(pre-uroporphyrinogen synthase) protein [Ralstonia
solanacearum GMI1000]
Length = 334
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 154/265 (58%), Gaps = 3/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E
Sbjct: 24 IASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 81
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L +V+
Sbjct: 82 LEVALAEGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAGAVV 141
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + I+
Sbjct: 142 GTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERIRA 201
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC+
Sbjct: 202 VIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHAPTALAVTAERAVSRQLGGSCQVP 261
Query: 248 IAGFA-YCKGSTLYFYGIVLASDGK 271
+A FA + L V + DG+
Sbjct: 262 LAAFAQWTDAGALRLRAFVASPDGR 286
>gi|171057453|ref|YP_001789802.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6]
gi|170774898|gb|ACB33037.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6]
Length = 322
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 143/258 (55%), Gaps = 3/258 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P I TR S LAL A R L H + ++ ++T+GD+I +R L+++GGKGL
Sbjct: 12 QPCIIATRESRLALWQAEHVRDLLQRRHGA---VVELLGMTTRGDQILDRALSKVGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L AVHS KD+P +L +G ++A L RED RD ++S+ + L
Sbjct: 69 FVKELEVALEEDRAQLAVHSLKDVPMELPEGFVLAAVLEREDPRDAWVSNHYDDVASLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR L R D+ + RG ++TRL KL+ I+LA AG+KRL +
Sbjct: 129 GARVGTSSLRRIVQLKAVRPDLEIHALRGNLDTRLRKLDEGLYDGIVLAAAGLKRLGLAQ 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +++ P+ GQGA+ IE + +E + + TW +V+ ERA L GS
Sbjct: 189 RIRSVIDPAVMLPAAGQGALGIEVRADASALREALAAMTDAPTWLAVHAERAVSRALGGS 248
Query: 244 CKSAIAGFAYCKGSTLYF 261
C +A FA +G+ L+
Sbjct: 249 CSMPLAAFAQWQGAQLHL 266
>gi|168206340|ref|ZP_02632345.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987]
gi|170662220|gb|EDT14903.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987]
Length = 291
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF +E
Sbjct: 5 IATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I
Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI +
Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C S
Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNKYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I
Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287
>gi|297197348|ref|ZP_06914745.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
gi|297146690|gb|EDY58887.2| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
Length = 314
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 147/291 (50%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA RS L ++ P ++P+ T GD+ L+++ GKG FT
Sbjct: 10 IRIVSRDSPMALAQVERVRSELTALY--PGVRTEVVPVRTTGDKWMG-DLSKVEGKGAFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L
Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTTFAAFLKRDDIRDALIHPGGLTLDELPE 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++
Sbjct: 127 GTRVGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLEAGEADALLLAVAGLERIGRQD 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + + + V + DT+ ER FL L G
Sbjct: 187 VISEVLSPETMMPPIGAGILGLQCREGDTELIDAVSALGDPDTYREATAERMFLHVLQGH 246
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG+A G L V DGK R D +G A
Sbjct: 247 CNSPIAGYARVDHGDELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVA 297
>gi|167754990|ref|ZP_02427117.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402]
gi|237735283|ref|ZP_04565764.1| porphobilinogen deaminase [Mollicutes bacterium D7]
gi|167705040|gb|EDS19619.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402]
gi|229381028|gb|EEO31119.1| porphobilinogen deaminase [Coprobacillus sp. D7]
Length = 297
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 149/281 (53%), Gaps = 9/281 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL L + P + I + T GD++ + L +I KG+F +E
Sbjct: 5 VGSRGSSLALKQTEYVIEKLQRAY--PENEYEIKVIHTIGDKMQHIALDKINDKGVFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IEK+L+ ID AVHS KDMP+ GL + L D RD + SL L H+ I
Sbjct: 63 IEKELLEHTIDLAVHSLKDMPSDNPAGLVYAKTLAPSDYRDCLVLKNCSSLARLPQHATI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
T S RRK LL+ R D+ ++D RG + TRL K+ N + ++LA AG+KRL E +I E
Sbjct: 123 ATGSKRRKYQLLKLRPDLKIVDIRGNVNTRLQKMANQEIDGLVLASAGLKRLGLEDLISE 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH---EDTWDSVNCERAFLAELDGSC 244
L+ P+ GQG + I+ ++ EL+ +IN+ E T + ER FL ++GSC
Sbjct: 183 YLDETKMIPACGQGILAIQVRQDS----ELLTMINNISDEITTTRMELERLFLKTVNGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
+ G+A G ++FYG++ DG + + + + DA
Sbjct: 239 HIPVGGYAKIIGDQVHFYGLLGNEDGTVLKNIDKKFSLKDA 279
>gi|309389759|gb|ADO77639.1| porphobilinogen deaminase [Halanaerobium praevalens DSM 2228]
Length = 310
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 155/278 (55%), Gaps = 4/278 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK + IGTR S LAL ++ L K P I +ST GDR ++ +EI +G
Sbjct: 2 KKEYIIGTRNSSLALKQCEILKAKLSS--KFPELEFKIKEISTTGDRERDKKFSEINVEG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F EIE L++ EID AVHS KD+PTKL L+++A + R + DV ++ L +LA
Sbjct: 60 IFIREIEYALLAEEIDLAVHSFKDLPTKLPAELEVAAVVDRANRYDV-LAGAENKLAELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT SLRRK+ LL +R D+ ++ RG IETRL K+ + ++LA AG++RL +
Sbjct: 119 KGARLGTGSLRRKSQLLAYRPDLEIVPIRGNIETRLKKIKTHNLDGVILAAAGLERLGYK 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E L E P+ QGA+ +E + K +E++K I E V E +FLAE++
Sbjct: 179 EQITEYLAPEICLPAARQGAVAVEIRKEDSKLKEILKTIETEKNNLEVWTEHSFLAEMEA 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRN 279
C + +A A + TL V DG +I +V++
Sbjct: 239 GCHAPVAAEAIIENKTLTLTAAVGEIDGSRIIKKVAKT 276
>gi|110801892|ref|YP_698741.1| porphobilinogen deaminase [Clostridium perfringens SM101]
gi|123047375|sp|Q0ST16|HEM3_CLOPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110682393|gb|ABG85763.1| hydroxymethylbilane synthase [Clostridium perfringens SM101]
Length = 291
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA + L + ++++ T+GDR + +L +IGGKGLF +E
Sbjct: 5 IATRKSKLAQVQTEKVMELLKKKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I
Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI +
Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + F P+ GQGA+ IE + + + + K ++ ++ +V ER+F+ L+G C S
Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKDGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I
Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287
>gi|224419071|ref|ZP_03657077.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|253828009|ref|ZP_04870894.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|313142581|ref|ZP_07804774.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|253511415|gb|EES90074.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|313131612|gb|EFR49229.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
Length = 314
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 163/297 (54%), Gaps = 13/297 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A + SL + P + + + TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGTRGSVLALWQANFVKDSLE--KQYPNLQVELKIVKTKGDKILDVPLAKIGGKGLFTKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ GEID AVHS KD+P + ++GL ++A RED+RD F+S ++L++L + +
Sbjct: 64 LEELMLKGEIDVAVHSLKDVPVEFVEGLGLAAITKREDVRDSFLSFKYKNLQELPQGAKV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR + R D+ + RG ++TRL +L AI+LA AG+ RL E +
Sbjct: 124 GTTSLRRVMQINTLRKDLDCMSLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIEGEVDC 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
I ++ P+ GQ A+ IE V++ A+ L++ +N + ER F+ L+G C+
Sbjct: 184 IAPLDFMIPAMGQAALGIECRVDSEVAK-LLEFLNDTKASFETSAEREFVKTLEGGCQVP 242
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC------DAINIGRD-AAQYIR 297
I A + L I+ DG + ++ C D GRD A ++I+
Sbjct: 243 IGINATLEKDNLTIRAILGIPDG---SRILKDAKVCAVSSLEDCKKAGRDFALEFIK 296
>gi|282865792|ref|ZP_06274842.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
gi|282559436|gb|EFB64988.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
Length = 311
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P+ T GD L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRNEL--AARYPALRTEVVPVRTTGDTWLG-DLSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLDELPP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S IGTSS+RR A L ++ + FRG RL KL + A+LLA +G++R+ +
Sbjct: 124 GSRIGTSSVRRTAQLAASHPELRCVPFRGNANRRLAKLAAGEVDALLLAVSGLRRIGRPD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI +IL E P G G + ++ ++ + V +NH T+ + ER FL L G
Sbjct: 184 VISDILGPETMIPPIGAGVLALQCRQDDTATIDAVAALNHPATYREITAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG+A + L G V DGK D +G A
Sbjct: 244 CNSPIAGYATSHRNGDLSLRGCVFTPDGKTVLNAHEWAGPLDPATLGTSVA 294
>gi|218677853|ref|ZP_03525750.1| porphobilinogen deaminase [Rhizobium etli CIAT 894]
Length = 123
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 92/121 (76%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLTTKGDRITDRSLSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D
Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMPTNLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120
Query: 121 L 121
L
Sbjct: 121 L 121
>gi|237736083|ref|ZP_04566564.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817]
gi|229421794|gb|EEO36841.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817]
Length = 299
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 144/264 (54%), Gaps = 4/264 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA + + L P + I + T GD+ ++N ++
Sbjct: 2 KKKIVIGSRGSILALAQSEIVKQQLE--KNFPEYEFEIKKIVTSGDKDLVSNWNNSDKSL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE +L++ ID AVHS KDMP+ +GL A RED RDV IS ++L +
Sbjct: 60 KSFFTKEIEVELLNETIDLAVHSMKDMPSISPEGLICGAIPDREDQRDVLISKNGKTLME 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR + R D+ + RG I TRLNKL AILLA AG+KR+
Sbjct: 120 LPKGAIVGTSSLRRTMNIKSLRPDLQIKQLRGNIHTRLNKLKTEDYDAILLAAAGLKRVG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I E L+ + F P+P QG + I+ N+ + + ++K I+ ED V ER F
Sbjct: 180 LENEITEYLDPKIFLPAPAQGVLHIQCRENDEEIKNILKTIHKEDIKKIVVIEREFSKIF 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI 264
DG C + + ++ G + FYG+
Sbjct: 240 DGGCHTPMGCYSEVNGDKITFYGV 263
>gi|312622563|ref|YP_004024176.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis
2002]
gi|312203030|gb|ADQ46357.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis
2002]
Length = 290
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 148/294 (50%), Gaps = 6/294 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG R S L+ + I +P+ TKGD ++L + G+
Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTLGIECE---FVPIKTKGDIDKTKSLKDFKSPGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L S EID AVHS KD+P ++ I A + RED RDV +S L
Sbjct: 59 FVKEIELALFSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDSRDVLVSKDGVGFYQLKP 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ I ++ + P PGQGAICIE ++P L K IN D + ER L L G
Sbjct: 179 RVSYIFDVNEITPCPGQGAICIECLKDSPYKNILNK-INDTDAYIQTQFERLVLKFLGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S+I F +Y + +L D + + S G++ D +++ + ++
Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGDKLV--KASIEGDKADFLSLANKLSNMLK 289
>gi|217070488|gb|ACJ83604.1| unknown [Medicago truncatula]
Length = 214
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
Query: 85 KDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSD 144
KD+PT L + + LPRED+RD FIS +A SL DL SVIGT+SLRRK+ +L
Sbjct: 2 KDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYPS 61
Query: 145 ISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
+SV D FRG ++TRL KL+ A LLA AG KRL + + L+I+D P+ QGAI
Sbjct: 62 LSVQDNFRGNVQTRLRKLSEGVVKATLLALAGPKRLNMTENVTSTLSIDDMLPAVAQGAI 121
Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY-CKGSTLYFY 262
I N+ K E + +NHE+T +++CERAFL LDGSC++ IAG+A K F
Sbjct: 122 GIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLFR 181
Query: 263 GIVLASDGKIFHEVSRNGNRC--DAINIGR 290
G+V + DG E SR G D + +GR
Sbjct: 182 GLVASPDGTRVLETSRIGPYAYEDMMKMGR 211
>gi|159041687|ref|YP_001540939.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167]
gi|189042877|sp|A8MDU3|HEM3_CALMQ RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|157920522|gb|ABW01949.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167]
Length = 305
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 159/296 (53%), Gaps = 17/296 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S L+L +++ +K ++I+ T GD ++ L EIG KG+F
Sbjct: 3 IRIATRGSALSLKQTKIVMDRILEFNKDVEFKLIIV--KTTGDVDLSKPLYEIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+ + ++ GE D AVHS KDMP ++ L + PR++ RD +S ++ L L+S
Sbjct: 61 REVNQAVLRGEADVAVHSLKDMPAQISNDLTLVMTPPRDNPRDALVSLRQYTVDTLPLNS 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ LL R D++V RG ++TR+ KLNN + A+++A AG++RL +
Sbjct: 121 IVGTSSLRRRGFLLSLRRDVTVKPIRGNVDTRIRKLNNGEYDALIMAAAGLERLSINANV 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI---NHEDTWDSVNCERAFLAELDG 242
EI + E PP+PGQG I + V +L+KV+ + E+T+ ERAFL+ +
Sbjct: 181 SEI-SPELMPPAPGQGIIGV---VARRDRDDLIKVLRRSSDEETFKEAAAERAFLSRIGA 236
Query: 243 SCKSAIAGFAYCKGSTLYF-YGIVLASDGKIFHEVSRNGNRCDAIN---IGRDAAQ 294
C + G A F YG+V DG E N R DA N GR AA+
Sbjct: 237 GCHVPLGGLALLDDGYFDFTYGVV-DPDG---VEKFINSTRIDARNPEEAGRVAAE 288
>gi|91782420|ref|YP_557626.1| porphobilinogen deaminase [Burkholderia xenovorans LB400]
gi|91686374|gb|ABE29574.1| Porphobilinogen deaminase [Burkholderia xenovorans LB400]
Length = 285
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 137/229 (59%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L +G +S +
Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVPMALPEGFALSTIME 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD +S+T SL L +V+GTSSLRR+A+L + V RG ++TRL KL+
Sbjct: 61 REDPRDALVSNTYDSLAALPEGAVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+KRL + I+ +L+ ED P+ GQGA+ IE + + + ++
Sbjct: 121 RGDYAAIILAAAGLKRLGLGERIRALLDPEDSLPAAGQGALGIEIRADRAELAAWLAPLH 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
HE T +V ER L GSC+ +A +A L+ GIV DG+
Sbjct: 181 HEHTAAAVEAERMVSRALGGSCEVPLAAYATWHDGALHLRGIVATPDGQ 229
>gi|295109819|emb|CBL23772.1| hydroxymethylbilane synthase [Ruminococcus obeum A2-162]
Length = 308
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 160/291 (54%), Gaps = 8/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LA+ + R + H P ++ I+ + T GD+I +RTL ++GGKGLF +E
Sbjct: 12 IGSRESRLAVLQSEMVRDYIKTQH--PELDVEILTMKTTGDKILDRTLDKVGGKGLFVKE 69
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++K L+ G +VHS KDMP ++ L + A+ RED RDV + + + +L L +
Sbjct: 70 LDKALLEGRTMLSVHSLKDMPMEVPGELPLLAFSKREDPRDVLV--LPEGVSELDLTKPL 127
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
G SSLRR L ++ V RG ++TRL KL+N + ++LA AG+KRL E I
Sbjct: 128 GCSSLRRTLQLKELYPEMEVKSIRGNLQTRLRKLDNGEYSGLILAAAGLKRLGLENRICR 187
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++ P+ GQG + ++ + + ++ E W + + ERAF+ L+G C S
Sbjct: 188 YFSEDEILPAAGQGILAVQGRQD--LTYDYLEGYRDEKAWFAGSAERAFVKYLNGGCSSP 245
Query: 248 IAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+A + +G L+ G+ DG+ F + R G + +A +GRD A+ ++
Sbjct: 246 VAAYGVVEGDELFLRGLYYRECDGRYFKDSIR-GPKSEAEKLGRDLAKRMQ 295
>gi|152980451|ref|YP_001352832.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille]
gi|151280528|gb|ABR88938.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille]
Length = 317
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 158/294 (53%), Gaps = 2/294 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A R L ++ P +I I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLAILY--PQCSIEILGMTTRGDQILDRTLSKVGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + D AVHS KD+ L G +++A L RED RD F+S+ +L+ L
Sbjct: 65 FVKELEVAIAEQRADLAVHSLKDVAMTLPDGFELAAVLEREDPRDAFVSNEFDTLEALPA 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+AL+ + + RG ++ RL KL+N + AI+LA AG+KRL
Sbjct: 125 GAIVGTSSLRRQALIAARYPQLVIRPLRGNLDRRLGKLDNGEYAAIILAAAGLKRLGLTA 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L E P+PGQGA+ IE +E + +NH +T +V ER GS
Sbjct: 185 RIRSYLPPEQSLPAPGQGAMAIEILSERADLKEWLAPLNHTETALAVTAERTVSRNFGGS 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ +A FA G + I+ DG +G +GR A ++
Sbjct: 245 CQIPLAAFATIDGVNMRLRAIIATPDGSKMASADLSGAANAPEALGRQIADALQ 298
>gi|325262509|ref|ZP_08129246.1| hydroxymethylbilane synthase [Clostridium sp. D5]
gi|324032341|gb|EGB93619.1| hydroxymethylbilane synthase [Clostridium sp. D5]
Length = 293
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 153/294 (52%), Gaps = 10/294 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ A + + H P + ++ + T GD+I +++L IGGKGLF
Sbjct: 5 IRIGSRESRLAVIQAEIVKELIQKNH--PDIQVELVTMKTTGDKILDKSLELIGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++K L+ G ID +VHS KDMP ++ K L I+AY RED RD I ++ +
Sbjct: 63 KELDKALLEGSIDISVHSLKDMPMEIPKELPIAAYSKREDPRDALICRPGCC--EIPVDG 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR L + + + RG ++TRL KL +LA AG+ RL E VI
Sbjct: 121 VIGTSSRRRSLQLKKLYPECTFRQIRGNVQTRLRKLEEEGYDGTILAAAGLSRLNMEHVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQE--LVKVINHEDTWDSVNCERAFLAELDGS 243
I + E+ P+ GQG + ++ K ++ + + ++ + ER F+A LDG
Sbjct: 181 GRIFSTEEMIPAAGQGILAVQGR----KGEDHFFLDCVENKKSRAEALAEREFVAVLDGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S +A A G+ L G+ + + +R GN DA +G A+ +R
Sbjct: 237 CTSPVAAHAEVNGNELKLTGLYYREEDDTYWTETRIGNTADARQLGAALAEEMR 290
>gi|56552799|ref|YP_163638.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753474|ref|YP_003226367.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|56544373|gb|AAV90527.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552837|gb|ACV75783.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 308
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 155/286 (54%), Gaps = 5/286 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+
Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I SL+ L
Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIG--IPSLEVLPYS 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GT+S RR A + R R DI + RG I+TRL KL N + A LLA AG+ RL + V
Sbjct: 122 GCVGTASPRRAAQIRRIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++ P+ GQGAI IE ++ A E V +I+H T +V ER L L+ C
Sbjct: 182 GYDV-PLDQMLPAAGQGAIGIEALADS-AAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIG 289
S IA FA + + +GK + + DA +G
Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGKFSASIDKEISQPSDAFEVG 285
>gi|253582657|ref|ZP_04859878.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium
varium ATCC 27725]
gi|251835527|gb|EES64067.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium
varium ATCC 27725]
Length = 306
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 154/297 (51%), Gaps = 6/297 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
K+ IGTR S LA+A + + L + P I + T GD ++N ++
Sbjct: 9 KRKIVIGTRGSILAMAQSEMIKKMLEN--NFPELEFEIKKIVTSGDTDLVSNWNNSDKSL 66
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV IS + ++L +
Sbjct: 67 KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLISKSGKTLME 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR L RSD+ + RG I TRLNKL AILLA AG+KR+
Sbjct: 127 LPKGAVIGTSSLRRTMNLKNLRSDLKIKQLRGNIHTRLNKLKTENYDAILLAAAGLKRVG 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I E L+ E F P+P QG + I+ N+ + +E++K I+++D V ER F
Sbjct: 187 LENEITEYLDPEKFLPAPAQGVLHIQCRENDEEIKEILKSIHNKDMEKIVVIEREFSKIF 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
DG C + + G + G+ G+ + S + I I + A I+
Sbjct: 247 DGGCHTPMGCHCILNGDKITLTGVYFK--GETGYSASITEDAALGIKIAQKLADIIK 301
>gi|18310417|ref|NP_562351.1| porphobilinogen deaminase [Clostridium perfringens str. 13]
gi|168216823|ref|ZP_02642448.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239]
gi|25453024|sp|Q8XKG4|HEM3_CLOPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|18145097|dbj|BAB81141.1| hydroxymethylbilane synthase [Clostridium perfringens str. 13]
gi|182381001|gb|EDT78480.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239]
Length = 291
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 6/289 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LA + L + ++++ T+GDR + +L +IGGKGLF +E
Sbjct: 5 IATRKSKLAQVQTEKVMELLKGKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I
Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI +
Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C S
Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I
Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287
>gi|88608800|ref|YP_506274.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str.
Miyayama]
gi|88600969|gb|ABD46437.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str.
Miyayama]
Length = 286
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 159/290 (54%), Gaps = 15/290 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKGL 63
++GTRCSPLAL A +L P+ ++ + T GD +++ LTE+GGK L
Sbjct: 4 LKVGTRCSPLALIQARLVERAL------APYCARTDLVEVKTSGDIVSDVPLTEVGGKAL 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L
Sbjct: 58 FLKELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPN 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+VIGT + RR +++ VI RG I TR+ K N I+LA+ ++RL +
Sbjct: 118 GAVIGTCAPRR---VVQLNQRFRVIPLRGNIATRIEKAKN--LDGIILAFCALERLGLRR 172
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+I E+++ P QGA+C+E + +EL+ I+ +T ERAFL E++G
Sbjct: 173 MISEVIHENVMLPGVAQGALCVEFRKKDRFLRELILNISDRETIICTAAERAFLEEINGD 232
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
CK+A+ A K + LYF G+ LA D + + +G+ +A +GR AA
Sbjct: 233 CKTALGALAIVKNNILYFTGM-LAKDNRPRY-FRTSGSCLNAKQVGRRAA 280
>gi|186683929|ref|YP_001867125.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102]
gi|186466381|gb|ACC82182.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102]
Length = 336
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 158/297 (53%), Gaps = 5/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL
Sbjct: 23 RTIRIGSRKSQLALVQTYWVQEQLQ--KSFPDITFEVHTMSTQGDKILDVALAKIGDKGL 80
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E +++ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 81 FTKELEVGMLNQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVVHEKHKDKQIDT 140
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL
Sbjct: 141 LPEGAVIGTSSLRRLAQLRHHFPHFTFKDVRGNLITRLAKLDAGEYDALILAAAGLERLG 200
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +I+ E + GQGA+ IE ++ + L+K I H T D ER+FL L
Sbjct: 201 MSDRVHQIIPKEISLHAVGQGALGIECRADDSELLTLLKAIEHPATRDRCLAERSFLRSL 260
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I G L GIV + DG+ + + G +A +G + A+ +R
Sbjct: 261 EGGCQVPIGVNTEISGENLTLTGIVASIDGQKLVKDTVTGIANNAEALGTELAELLR 317
>gi|238022038|ref|ZP_04602464.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147]
gi|237866652|gb|EEP67694.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147]
Length = 316
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 7/273 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LA+ A ++ L ++ P I II ++T+GD+I ++TL++IGGKGL
Sbjct: 8 QTLTIASRESALAMWQARHIQAQLQSLY--PQCQIHIIGMTTQGDQILDKTLSKIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L D AVHS KD+P L +G ++A R + D F+S+ L++L
Sbjct: 66 FIKELETALQENRADLAVHSIKDVPMDLPQGFTLAAIGERANPFDAFVSNRYTRLEELPH 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ +
Sbjct: 126 GAIVGTSSLRREAQLRARFPHLTIRPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS
Sbjct: 186 RIRAVLPPADSLPAAGQGALGIEIAAHRTDLIDVLLPLNHAKTAACVTAERALARALGGS 245
Query: 244 CKSAIAGFAYCKG---STLYFYGIVLASDGKIF 273
C+ +A AYC L G+V DG +
Sbjct: 246 CQVPLA--AYCTADDHGLLTLSGLVGHPDGSVI 276
>gi|223648136|gb|ACN10826.1| Porphobilinogen deaminase [Salmo salar]
Length = 359
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA L ++ P ++ I+ ++T GD+I + L++IG K LFT
Sbjct: 19 IRIGTRKSQLARIQTDSVAEKLKGLY--PDVHLEIVGMTTTGDKILDTALSKIGEKSLFT 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE+ D + H +SL L
Sbjct: 77 KELETALEKNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPKNMGKSLDTLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 DKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKDDFSAIILAAAGLRRMGW 196
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL ED + GQGA+ IE + E+V V++ +T ERAFL L+
Sbjct: 197 DSRVSQILGPEDCMYAVGQGALAIEVRARDEDILEMVSVLHDPNTVLRCIAERAFLRRLE 256
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K S LY G V + DG
Sbjct: 257 GGCSVPVAVHTEVKDSQLYLTGAVYSLDG 285
>gi|297172436|gb|ADI23410.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0770_28K04]
Length = 311
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 155/294 (52%), Gaps = 4/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F +GTR S L+LA S L + P I ++T GD T R L I KG+F
Sbjct: 3 FLVGTRGSKLSLAQTNWVISELQKQN--PGSEFEIKTITTNGDTDT-RALFTIDQKGIFE 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L++
Sbjct: 60 KEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGFNLKTIPLNA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL + V
Sbjct: 120 VVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGLD-VK 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C+
Sbjct: 179 HSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIESERALSDYVESGCR 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ A L + DGK + + G+ N+G+ + ++ I
Sbjct: 239 FPVGALAIANSGMLKLTVTAYSVDGKKSITIEKTGDIDKPRNLGQGVGEELQKI 292
>gi|313682001|ref|YP_004059739.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994]
gi|313154861|gb|ADR33539.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994]
Length = 313
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 141/248 (56%), Gaps = 5/248 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + +S + + II T GD+I + L +IGGKGL
Sbjct: 2 KKLTIATRGSKLALWQSNHIKSVIESQFSDVEVELKII--ITSGDKILDVPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ GE AVHS KD+PT + +GL +SA RED+RD +S +K L
Sbjct: 60 FLKEIEESMLRGEAQMAVHSLKDVPTVMPQGLLLSAITVREDVRDAMLSEKYPDIKSLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+ L++ R D+ + D RG ++TR+ KL + AI+LA AGI RL
Sbjct: 120 GAVVGTSSLRRRMQLVQQRPDLVIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLGFSN 179
Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+++ + +++ P+ GQGA+ IET VN P E+ K + E++ ER F+ L
Sbjct: 180 LVQYFYPIALDEMLPAMGQGALGIET-VNEPWVLEIAKFLEDENSRIETTIERGFVDTLQ 238
Query: 242 GSCKSAIA 249
G C+ I
Sbjct: 239 GGCQVPIG 246
>gi|310826391|ref|YP_003958748.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium
limosum KIST612]
gi|308738125|gb|ADO35785.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium
limosum KIST612]
Length = 804
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 160/295 (54%), Gaps = 8/295 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LA+ +T L ++ K P + + + TKGD+I ++ L +IG KG+FT+
Sbjct: 5 VGSRGSKLAVV---QTNWLLEELRKANPEVDFELKIIKTKGDKIQHKALDKIGDKGIFTK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHS 125
E+E L+SGEID AVHS KDMP+ L GL +S RED RDV ++ H ++++L ++
Sbjct: 62 ELEDALLSGEIDMAVHSMKDMPSALPDGLTLSVPPMREDPRDVLLTPHKISAIQELPENA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIGT S RR L R D V+ RG I+TR+ K+ I+LA AG+KR+ E
Sbjct: 122 VIGTGSKRRIYQLKNIRKDFEVVGIRGNIDTRIRKMKEQGLDGIILAAAGLKRIGVYESG 181
Query: 185 IKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L ++ F +P QG + +E +N + L++ +++ T + ER FL L+G
Sbjct: 182 DYTCLPLDPCQFVSAPAQGILAVEIREDNETVKALMESVSNPVTKAQMTAERQFLISLNG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
SC I + +G L YG+ DG I ++ G + +G A+ ++
Sbjct: 242 SCHIPIGAYCNVEGEKLTLYGLFGNEDGTILYKGQTEGAMGEEAKMGDRLAKELK 296
>gi|58040313|ref|YP_192277.1| porphobilinogen deaminase [Gluconobacter oxydans 621H]
gi|58002727|gb|AAW61621.1| Porphobilinogen deaminase [Gluconobacter oxydans 621H]
Length = 357
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 164/318 (51%), Gaps = 19/318 (5%)
Query: 3 KKPFRIGTRCSPLALAHA--FETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTL 55
K P R+G+R SPLAL F TR + L D+ + I ST+GDR + L
Sbjct: 40 KLPLRVGSRASPLALVQTRNFLTRLTRFCPVLRDMGAFQEYQI-----STEGDRNLVQRL 94
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
EIGGKGLF +EI + L +G ID AVHS KD+ T L GL ++ L RED RD I
Sbjct: 95 AEIGGKGLFAKEIHEALAAGRIDFAVHSLKDLETNLPPGLVLACTLKREDARDALILRDR 154
Query: 116 QSLKD-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
D L ++IG +S+RR+A +L R D+ RG ++TRL+KL A
Sbjct: 155 DVKVDPQRPYDCLPEGALIGCASVRRQAQMLHVRPDLRFCLLRGNVQTRLDKLRAGACEA 214
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
LLA AG++RL E + +L + P+ GQG + + ++ + +EL+ I +
Sbjct: 215 TLLALAGLRRLGMEDRVDVVLEPDQMLPASGQGIVGVTVRESDLELRELLSAIEDPEARA 274
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
ERA LAELDGSC++ I G+A + L G++ + DG G +A +
Sbjct: 275 VSTAERALLAELDGSCRTPIGGYARIENGVLKLSGMIASEDGTFLLRREIEGAPLEAARL 334
Query: 289 GRDAAQYIRFISNKNVFN 306
G + A +R + ++F+
Sbjct: 335 GTELADELRRDTPAHIFD 352
>gi|312127739|ref|YP_003992613.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108]
gi|311777758|gb|ADQ07244.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108]
Length = 290
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 138/249 (55%), Gaps = 3/249 (1%)
Query: 41 IPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100
+P+ TKGD ++L + G+F +EIE+ L++ EID AVHS KD+P ++ +I A
Sbjct: 36 VPIKTKGDIDKTKSLKDFKSPGVFVKEIERALLTREIDLAVHSLKDLPCEIDSNFEIVAV 95
Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
+ RED RDV +S L ++ IGTSSLRR+ L R DI V++ RG IETRL+K
Sbjct: 96 VEREDPRDVLVSKDGVGFYQLKPNAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSK 155
Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
+ + +++AYA +KRL + + I +I + P PGQGAICIE ++P L K
Sbjct: 156 IESEGLDGVIVAYAALKRLNLDSYVSYIFDINEITPCPGQGAICIECLKDSPYKSILSK- 214
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
IN + + ER L L G C S+I F +Y + +L D + + S G
Sbjct: 215 INDVNAYIQTQFERLVLKFLGGGCHSSIGVFCKTDQDKIYAFASLLRGDKLV--KASIEG 272
Query: 281 NRCDAINIG 289
++ D +++
Sbjct: 273 DKADFLSLA 281
>gi|225872374|ref|YP_002753829.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196]
gi|225793745|gb|ACO33835.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196]
Length = 312
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 139/247 (56%), Gaps = 8/247 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL----TEIGGK 61
RIG+R S LAL A + L + H + I + T GD + + T TE+GGK
Sbjct: 2 MRIGSRGSQLALWQANHIAARLRTLG----HEVTIEIIRTTGDALQHVTFAKVSTELGGK 57
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+EIE+ L G ID AVHS KD+PT L ++A R D RD +S SL L
Sbjct: 58 GIFTKEIEEALREGRIDLAVHSLKDLPTDLDPAFTLAAIPERVDPRDALLSARYTSLASL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSS RR+A LL RSD+ +FRG ++TR+ K+ +A AI+LA AG++RL
Sbjct: 118 PHGACVGTSSERRRAQLLVHRSDLRFQEFRGNVDTRIRKMVEGQADAIILASAGLERLGL 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +E L E P+ GQGA+ IET ++ + ++ ++H T +V ER LA L
Sbjct: 178 TEYRRECLAPEILCPAAGQGALAIETRADDAETLAILASLDHSATRYAVTAERTALASLG 237
Query: 242 GSCKSAI 248
G C+ I
Sbjct: 238 GGCQVPI 244
>gi|291277466|ref|YP_003517238.1| porphobilinogen deaminase [Helicobacter mustelae 12198]
gi|290964660|emb|CBG40515.1| porphobilinogen deaminase [Helicobacter mustelae 12198]
Length = 315
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 160/297 (53%), Gaps = 9/297 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A L I ++ T+GDR+ + L +IGGKGLFT+E
Sbjct: 10 IGTRGSALALWQAEYIAMRLKKELGIESRLQIV---KTQGDRMLDVPLAKIGGKGLFTKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+EK L+ +ID AVHS KD+P + ++GL ++ RED+RD F+S S+ DL + +
Sbjct: 67 LEKLLLQEKIDIAVHSLKDVPVEFVEGLDLACITKREDVRDCFLSVRYASILDLPPGARV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEKV- 184
GT+SLRR L R D+ RG ++TRL +L + + AI+LA AG+ RL ++KV
Sbjct: 127 GTTSLRRSMQLKILRKDLDTQSLRGNVQTRLKRLFDGEFDAIILAQAGLNRLGIDQQKVP 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ P+ GQGA+ IE + L++ +N E T N ER F+ LDG C
Sbjct: 187 FLKPFSTEELIPAMGQGALGIEAREGD-GIFSLLQGLNDEATAICTNAERTFIRVLDGGC 245
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ I A C + I+ DG S +G+ D+I + + A+ RF+S
Sbjct: 246 QVPIGVHAQCNNQDFVIHAILGLPDGSKVLRDSISGSTKDSILLAENLAE--RFLSQ 300
>gi|148642941|ref|YP_001273454.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061]
gi|222445181|ref|ZP_03607696.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii
DSM 2375]
gi|261350258|ref|ZP_05975675.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374]
gi|148551958|gb|ABQ87086.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061]
gi|222434746|gb|EEE41911.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii
DSM 2375]
gi|288861043|gb|EFC93341.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374]
Length = 289
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 157/285 (55%), Gaps = 6/285 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LALA +T D+ I NI + + TKGD+ITN L + KGLFT
Sbjct: 1 MNVGTRGSQLALA---QTNQVCKDLASITNENIDVNIIKTKGDKITNSQLYNMDAKGLFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++K L+ EID AVHS KD+PT+L + L+I+A R +V IS+ ++ +L +S
Sbjct: 58 KELDKALLEEEIDFAVHSFKDLPTELDEELEIAAVPKRVAPNEVLISN--KNWDELGPNS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A + RG IETR++K+N + A L+A AG+ RL + I
Sbjct: 116 KLGTSSLRREAFCNYHNKCFELKPIRGNIETRISKVNGSDLDATLMAQAGLIRLNLTQHI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K + ++ P+ GQGA+ I T ++ K +E++ +N + V E+ L EL C+
Sbjct: 176 KTVFPLDYITPAAGQGALAIITRKDSDK-KEIISKLNDYQSRQEVFAEKQVLEELGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
I A K Y I+L +G++ E + G+ DA+ G+
Sbjct: 235 WPIGAIAQMKDKQFCIYSILLTKEGEVLKEHTEKGSIRDAVQFGK 279
>gi|307728969|ref|YP_003906193.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003]
gi|307583504|gb|ADN56902.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003]
Length = 307
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 142/243 (58%), Gaps = 1/243 (0%)
Query: 30 VHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88
+HK+ P + I+ ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P
Sbjct: 11 LHKLYPSCEVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVP 70
Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
+L G +S + RED RD +S+ SL L +V+GTSSLRR+A+L + V
Sbjct: 71 MELPPGFALSTIMEREDPRDALVSNHYDSLAALPAGAVVGTSSLRREAMLRMRYPHLEVR 130
Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208
RG ++TRL KL+ AI+LA AG+KRL I+ +L+ +D P+ GQGA+ IE
Sbjct: 131 PLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDRIRALLDPQDSLPAAGQGALGIEIR 190
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
+ + ++HE T +V ER L GSC+ +A +A L+ G+V
Sbjct: 191 ADRADLAAWLTPLHHEHTAAAVEAERMVSRALGGSCEVPLAAYAEWHDGALHLRGVVATP 250
Query: 269 DGK 271
DG+
Sbjct: 251 DGR 253
>gi|253997747|ref|YP_003049810.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4]
gi|253984426|gb|ACT49283.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4]
Length = 320
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 2/289 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF +E
Sbjct: 15 IASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLFVKE 72
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L S++
Sbjct: 73 LEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAGSIV 132
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL I +
Sbjct: 133 GTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNRIAQ 192
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ED P+ GQGA+ IE + ++ +NH DT V ER L GSC
Sbjct: 193 TIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSCTVP 252
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A +G + +G V + DGK GN +G+ AQ +
Sbjct: 253 LGAYATKQGENITIHGFVASVDGKQMLRAEATGNAAQPELLGQQLAQSL 301
>gi|300312229|ref|YP_003776321.1| porphobilinogen deaminase [Herbaspirillum seropedicae SmR1]
gi|300075014|gb|ADJ64413.1| porphobilinogen deaminase protein [Herbaspirillum seropedicae SmR1]
Length = 318
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 144/263 (54%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R L ++ P +I I+ +T+GD+I +R L+++GGKGLF +E
Sbjct: 11 IVSRESRLAMWQAEYVRDRLAALY--PQCSISILGTTTRGDQILDRALSKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E + G D AVH KDMP L +G +++A L RED RD F+S+ +L +L +V+
Sbjct: 69 LEVAMAEGRADLAVHCLKDMPMDLPEGFELAAILEREDPRDAFVSNDYAALDELPDGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A++ + V RG ++TRL KL+ AI+LA AG+ RL + I+
Sbjct: 129 GTSSLRRQAMIAARYPQLVVKPLRGNLDTRLAKLDRGDYAAIILAVAGLNRLGLKARIRS 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+ PSPGQG + IE + L+ ++ E ER+ SC+
Sbjct: 189 FLDPAQSLPSPGQGTLAIEIPEGREDIKRLLAPLHDEPAAVVSAAERSVSRIFGASCQIP 248
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A +A G L+ ++ DG
Sbjct: 249 LAAYATLDGQRLHLRAMIATPDG 271
>gi|330817976|ref|YP_004361681.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3]
gi|327370369|gb|AEA61725.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3]
Length = 323
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 148/263 (56%), Gaps = 2/263 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLALWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G +S + RED RD F+S+ SL DL +++
Sbjct: 74 LENALADGRADLAVHSLKDVPMSLPEGFVLSTVMSREDPRDAFVSNDYASLDDLPTGAIV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L D V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRAHYLDFDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDRIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++++E PP+ GQGA+ IE + + ++ T + ER L GSC
Sbjct: 194 LIDVETSPPAAGQGALGIEIAASRTDVARWLAPLHDSATALAAEAERMVSRALGGSCSVP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A A G L G V + G
Sbjct: 254 LAAHAIWHGERLELTGRVSNTSG 276
>gi|299066045|emb|CBJ37226.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum CMR15]
Length = 334
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 152/264 (57%), Gaps = 3/264 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E
Sbjct: 24 IASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 81
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L +V+
Sbjct: 82 LEVALAEGRADLAVHSLKDVPMELPPGFALSAILEREDPRDAFVSNDYADLAALPAGAVV 141
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL I+
Sbjct: 142 GTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSARIRA 201
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC+
Sbjct: 202 VIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHVPTTLAVTAERAVSRQLGGSCQVP 261
Query: 248 IAGFA-YCKGSTLYFYGIVLASDG 270
+A FA + L V + DG
Sbjct: 262 LAAFAQWTDAGALRLRAFVASPDG 285
>gi|282165595|ref|YP_003357980.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE]
gi|282157909|dbj|BAI62997.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE]
Length = 303
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 144/266 (54%), Gaps = 6/266 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA+A A + L+ + +I T GD T+ L + G G F
Sbjct: 1 MRVGTRGSRLAMAQARKV-CGLLSERGVEASPAII---KTSGDVHTSEPLHAMKGVGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ +L++GE+D AVHS KD+PTK +GL +A L RE DV ++ + L +L +
Sbjct: 57 REIDDRLLAGEVDIAVHSLKDVPTKRPEGLATAAVLKRESALDVAVTREGKKLSELEEGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR AL+ + + + RG ++TRL KL + AILLA AG+ RL + +I
Sbjct: 117 VVGTSSTRRAALIKKHYPHLRTNNIRGNVDTRLRKLGEGEYDAILLAEAGLIRLGMD-II 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KE L+ DF PS QG I I P+ + V +N DTW ERA + LDG C
Sbjct: 176 KERLDPYDFVPSANQGVIAIVARPGTPEF-DAVSALNDHDTWLETGVERAIASALDGGCV 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
+ + +A +G L VL+ DG+
Sbjct: 235 APMGAYARLEGDGLDVVCEVLSLDGR 260
>gi|82703803|ref|YP_413369.1| porphobilinogen deaminase [Nitrosospira multiformis ATCC 25196]
gi|82411868|gb|ABB75977.1| hydroxymethylbilane synthase [Nitrosospira multiformis ATCC 25196]
Length = 321
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 159/290 (54%), Gaps = 2/290 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L +++ P I ++T+GD+I + TL++IGGKGLF +E
Sbjct: 12 IATRESALALWQANFIRDRLAELY--PQMEFQISGMTTRGDQILDVTLSKIGGKGLFIKE 69
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L G D AVHS KD+P + G ++A RED RD F+S+ L L SV+
Sbjct: 70 LEQALEDGRADIAVHSMKDVPMDMPAGFALAAITEREDPRDAFVSNKYARLDALPPGSVV 129
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL + I
Sbjct: 130 GTSSLRRESQLRARFPHLQVQPLRGNVQTRLRKLDEGQFAAIILAAAGLKRLGLAERITA 189
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+ + P+ GQGA+ IE + +L++ ++H T V ERA L GSC+
Sbjct: 190 LLSPDLSLPAVGQGALGIECRADRSDLIKLMEPLHHIPTARCVEAERAMSRALGGSCEVP 249
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ GFA G L G V + DG NG+ D +IG A+ ++
Sbjct: 250 LGGFAEIDGHVLRLRGFVASQDGIRMVSDELNGSPDDCASIGAQLAKNLK 299
>gi|152990765|ref|YP_001356487.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2]
gi|166217777|sp|A6Q3S1|HEM3_NITSB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151422626|dbj|BAF70130.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2]
Length = 310
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 141/244 (57%), Gaps = 9/244 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + ++ L + + + TKGD+I + L IGGKGLFT+E
Sbjct: 5 IATRGSKLALWQSNHIKAQLESFG----YEVELKIFKTKGDKILDTPLALIGGKGLFTKE 60
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E ++ GE D AVHS KD+PT+L +GL + A RE D +S ++L DL ++V+
Sbjct: 61 LEDAMLRGEADLAVHSLKDVPTELPEGLVLGAITKREMTNDSLLSEQYETLADLPPNAVV 120
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+ LL R DI + D RG ++TR+NKL N + AI+LAYAG+KRL + ++
Sbjct: 121 GTTSLRRRMQLLHLRPDICIKDLRGNVDTRINKLKNGEFDAIILAYAGLKRLGILESVRY 180
Query: 188 ILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ I++ P+ GQ A+ IE P ++VK +N E + ER F+ L G C+
Sbjct: 181 VHPIDENTMIPAMGQAALGIECR---PDVVDVVKKLNDEKSAIETFIERDFIDRLQGGCQ 237
Query: 246 SAIA 249
I
Sbjct: 238 VPIG 241
>gi|269119644|ref|YP_003307821.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386]
gi|268613522|gb|ACZ07890.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386]
Length = 297
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 158/301 (52%), Gaps = 15/301 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG----KGL 63
+GTR S LA+A A + L + KIP + I + T GDR ++T T GG K +
Sbjct: 6 MGTRGSVLAVAQAETVKKML--IEKIPGLTVEIKKIVTSGDR--DQT-TNWGGDSSLKSM 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE++L+ G ID AVHS KDMP +GL + + RED RDV +S ++
Sbjct: 61 FVKEIERELLEGTIDFAVHSMKDMPQISPEGLINACFPIREDNRDVLVSKNNTVFSEMPS 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SVIGTSSLRRK+ + ++ + RG I TRL KL++ + I+LA AG+ R E
Sbjct: 121 GSVIGTSSLRRKSAVTELYPEMEIKPIRGNIHTRLGKLDSGEYDGIILAAAGLIRTGLES 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E ++ E PP+P QG +C++ NN + E++K I+ +T ER F DG
Sbjct: 181 RISEYIDPEKMPPAPAQGILCVQCRENNMEILEILKEIDDRETRIICEAEREFSRIFDGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + + FA K ++ G+ + + F E +I ++AAQ + I +
Sbjct: 241 CHTPMGCFAVIKEEEIFLKGMFCSGEKMYFGEAG------GSIEKPKEAAQKLAEIIRRQ 294
Query: 304 V 304
+
Sbjct: 295 I 295
>gi|242309899|ref|ZP_04809054.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489]
gi|239523196|gb|EEQ63062.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489]
Length = 314
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 152/267 (56%), Gaps = 3/267 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IGTR S LAL A + +L + + + I+ TKGD+I + L +IGGKGL
Sbjct: 2 KKIIIGTRGSVLALWQANFVKRALEEQYSNLEVELKIV--KTKGDKILDVPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ ++ GEID AVHS KD+P + ++ L ++A RED+RD F+S +SL++L
Sbjct: 60 FTKELEELMLKGEIDIAVHSLKDVPVEFVENLGLAAITKREDVRDSFLSFKYKSLEELPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR + R D+ I RG ++TRL +L AI+LA AG+ RL E
Sbjct: 120 GAKVGTTSLRRVMQIHTLRKDLDCISLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIEN 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I I+ ++ P+ GQ A+ IE +++ K E++ +N + + ER F+ L+G
Sbjct: 180 EIPYIIPLDFMIPAMGQAALGIECRMDS-KVVEMLDFLNDKKACFETSAEREFVRTLEGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ I A + + L ++ DG
Sbjct: 239 CQVPIGVNANLENNLLSIKAVLGIPDG 265
>gi|281203457|gb|EFA77657.1| porphobilinogen deaminase [Polysphondylium pallidum PN500]
Length = 324
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 146/271 (53%), Gaps = 11/271 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LA+ SL ++H P I + T GDR+ N L++IG KGLFT+E
Sbjct: 12 IGSRKSQLAMVQTESVMKSLQELH--PNLKFEIKTMDTVGDRVLNVALSKIGDKGLFTKE 69
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS-- 125
+E ++SG ID AVHS KD+PTK +GL + A RE+ D FI+H KD L S
Sbjct: 70 LEDLMLSGHIDIAVHSLKDLPTKFPEGLSLGAITKRENCFDAFIAHPKYG-KDARLSSMP 128
Query: 126 ---VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181
VIG+SSLRR + L R + D RG + TR NKL + + ++LA AG++RL
Sbjct: 129 EGAVIGSSSLRRVSQLKRAYPQLQFKDIRGNLNTRFNKLETSGEYDGMILAVAGLERLGW 188
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E+L E + GQGA+ IE ++ Q L+ +NH +T ERA L EL+
Sbjct: 189 TDRITEVLQPEVSLYAVGQGALGIECRSDDEFVQSLLAPLNHYETAQCCAAERAMLRELE 248
Query: 242 GSCKSAIAGFAYCK--GSTLYFYGIVLASDG 270
G C I + S L G+VL+ DG
Sbjct: 249 GGCHVPIGVNTTLEQNNSILSIEGVVLSLDG 279
>gi|197121772|ref|YP_002133723.1| porphobilinogen deaminase [Anaeromyxobacter sp. K]
gi|220916566|ref|YP_002491870.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196171621|gb|ACG72594.1| porphobilinogen deaminase [Anaeromyxobacter sp. K]
gi|219954420|gb|ACL64804.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 314
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 148/291 (50%), Gaps = 3/291 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P L GL ++A RED RD S ++L L +
Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLAAVPQREDPRDALCSPRWKTLAALPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEMVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E ++ + + DT + ER FLA ++G C+
Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLARLAALEDPDTRVRIEAERGFLARIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG A G + +V + DG R G +A +G A +
Sbjct: 239 VPIAGHATLAGGKVTIRALVASLDGARVIRGERTGAYAEARAMGESLADEL 289
>gi|330470294|ref|YP_004408037.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032]
gi|328813265|gb|AEB47437.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032]
Length = 336
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 163/317 (51%), Gaps = 20/317 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + +L P + +I T GDR ++ + +G G+F
Sbjct: 9 PLRLGTRGSKLAMAQSGHVAEALTARTGRPVELVEVI---TAGDR-SSAPVHRLG-VGVF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L++ EID AVHS KD+PT + GL I+A PRED RD ++ ++L +LA
Sbjct: 64 VSALRDALVAREIDFAVHSYKDLPTAMPAGLHIAAVPPREDPRDALVARDGRTLAELAPG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKE 182
+ IGT +LRR A L +SV RG I+TRL ++ A AI+LA AG+ R+ +
Sbjct: 124 ASIGTGALRRIAQLHALGMQLSVSPIRGNIDTRLARVLGPDADLDAIVLARAGLARIGRL 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+P QGA+ +E V++P+ EL+ ++H + +V ERA LA L+
Sbjct: 184 DVITETLDPMLMLPAPAQGALAVECRVDDPEMVELLGTLDHAASRATVTAERAMLATLEA 243
Query: 243 SCKSAIA-------GFAYCKG------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
C + +A G G +Y G V++ DG +SR G DA IG
Sbjct: 244 GCSAPVAAYAVVAEGEPTGSGVEGDVVQEIYLRGAVISPDGSRDIRLSRTGTLADAAEIG 303
Query: 290 RDAAQYIRFISNKNVFN 306
+ A + + ++
Sbjct: 304 KALATELLDLGADSILG 320
>gi|217969858|ref|YP_002355092.1| porphobilinogen deaminase [Thauera sp. MZ1T]
gi|217507185|gb|ACK54196.1| porphobilinogen deaminase [Thauera sp. MZ1T]
Length = 310
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 150/290 (51%), Gaps = 2/290 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L +H P + ++ ++T+GD+I +R L ++GGKGLF +E
Sbjct: 11 IATRESRLALWQAEHIKARLEALH--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFVKE 68
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G D AVHS KD+P + + RE D F+S +SL D+ +V+
Sbjct: 69 LETALLDGRADIAVHSMKDVPMVMEPEFALPCITAREVPLDAFVSSRYESLADMPPGAVV 128
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL + I+
Sbjct: 129 GTSSLRRESQIHAQYPFLGVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLGERIRS 188
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+ GQGA+ IE ++ + DT V ERA L GSC+
Sbjct: 189 VMPAEVSLPAAGQGALGIECLSARADVIGWLQPLVDADTTACVLAERAVARALAGSCEVP 248
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ +A + L+ G V DG R G +A +GR A +R
Sbjct: 249 LGAYAVMREGRLWLRGFVARPDGSTIVRAEREGAPAEAEALGRALADDLR 298
>gi|258404816|ref|YP_003197558.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692]
gi|257797043|gb|ACV67980.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692]
Length = 311
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 139/249 (55%), Gaps = 2/249 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I TR S LAL A + L + + P + + + T+GD+I + L +IGGK L
Sbjct: 2 RSLTIATRGSKLALWQANHIKGRLEE--RYPGIEVHLEVIKTQGDKILDVPLAKIGGKAL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ G D AVHS KD+P +L +GL + RED D +S +L+++
Sbjct: 60 FVKEIEEAMLDGRADLAVHSMKDVPAELPEGLTLGVIPQREDYTDCLLSQHYTTLEEIPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRRK LLR R D+ + D RG ++TR+ KL AI++A AG++RL+
Sbjct: 120 GATIGTSSLRRKTQLLRLRPDLVIQDLRGNLDTRIRKLEEGMFDAIVVASAGLRRLQTGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L F P+ GQGA+ IE + +E++ ++H T V ERAFL L+G
Sbjct: 180 RYMTELAPPQFLPAVGQGALGIEYPEDRKDLEEMLGFLDHPPTRFCVLTERAFLHRLEGG 239
Query: 244 CKSAIAGFA 252
C+ I G A
Sbjct: 240 CQVPIGGHA 248
>gi|237752686|ref|ZP_04583166.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430]
gi|229376175|gb|EEO26266.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430]
Length = 310
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 151/267 (56%), Gaps = 4/267 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IGTR S LAL A ++ L + + P + + + TKGD+I + L +IGGKGL
Sbjct: 2 QKLTIGTRGSVLALWQANHIKNLLEE--RYPKLEVELKIVKTKGDKILDVPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E L+ G+ID AVHS KD+P + +GL ++A RED+RD F+S ++L DL
Sbjct: 60 FTKELEVLLLEGDIDLAVHSLKDVPVEFTQGLGLAAITKREDVRDSFLSFKYKNLGDLPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR + R D+ RG ++TRL +L N + AI+LA AG+ RL+ K
Sbjct: 120 GAKVGTTSLRRVMQINALRGDLDCQSLRGNVQTRLQRLENEEFDAIILAQAGVNRLEL-K 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I I ++ P+ GQ A+ IE + EL+ +N ++ +CERAF+ L+G
Sbjct: 179 GIPYITPLDFMVPAMGQAALGIECK-KDSNYVELLSFLNDKNAVFETHCERAFVRVLNGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ I A +L I+ DG
Sbjct: 238 CQVPIGINARYNEGSLEVRAILGLPDG 264
>gi|315925350|ref|ZP_07921561.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621251|gb|EFV01221.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 309
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 149/298 (50%), Gaps = 6/298 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +G+R S LA+ L H + II +TKGDR ++ L IG KGL
Sbjct: 2 KKIVVGSRGSKLAVTQTNWLIERLAAAHPDIAFELKII--TTKGDRNQHQALDAIGDKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLA 122
FT E+E +L+SGEI AVHS KDMP+ L +GL ++ RED DV ++ H A SL DL
Sbjct: 60 FTAELEAELLSGEIQMAVHSMKDMPSALPEGLCLTVPPMREDPADVLVTPHGAASLDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIG+ S RR L R D+ + RG I+TR+ KL + I+LA AG++RL
Sbjct: 120 EGAVIGSGSKRRVFQLKALRPDLQTVGIRGNIDTRIRKLFDEHLDGIVLAAAGMRRLNVY 179
Query: 183 KVIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
L F P+P QG + +E +N + + L+ I+ E + ER+FL
Sbjct: 180 DAADYHLVPLLPPAFVPAPAQGILAVEIREDNAEVKALMAAISDETARVQMAAERSFLTA 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
LDG C I + G + YG+ G + S G DA +G A+ +R
Sbjct: 240 LDGDCHLPIGAYCEAAGDAITLYGLYGDEAGTRLVKGSAAGRAADAERLGAQLAEQLR 297
>gi|289423443|ref|ZP_06425247.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L]
gi|289156201|gb|EFD04862.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L]
Length = 307
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 158/298 (53%), Gaps = 13/298 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA+ ++D K NI I +STKGDRI +++L +IG KG+FT
Sbjct: 5 VGTRGSKLAVTQT----KIVVDAIKSNFENIDVDIKIISTKGDRILDKSLDKIGDKGIFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++LI GEID A+HS KDMP++L +GL ++ + RED RD+ I ++ D +
Sbjct: 61 QEIERQLIEGEIDFAIHSLKDMPSELGEGLVLTKTIQREDPRDLLILNSKFKKIDDPIKW 120
Query: 126 V-------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ IGT S RR A LL ++ + RG I+TRL K+ AI+LA AG+ R
Sbjct: 121 LKENDGMRIGTGSKRRSAQLLNINPNLKIDLIRGNIDTRLEKMEKESYDAIVLAAAGVNR 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
LK + + +L+ P+ GQGA+ IE N + + + I+ + V ER +LA
Sbjct: 181 LKMDWINSYVLDEGSMIPAVGQGALAIEIKEGNQELVNIFEAISDDIANVCVEAERTYLA 240
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
++G C + A L GI + D K+ S G DA IGR+ A I
Sbjct: 241 TINGGCHMPVGALAQVNEGKLCLKGIYGSEDCKLIISSSLEGPLEDAQRIGRELADKI 298
>gi|113952874|ref|YP_731239.1| porphobilinogen deaminase [Synechococcus sp. CC9311]
gi|122945597|sp|Q0I8I3|HEM3_SYNS3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|113880225|gb|ABI45183.1| porphobilinogen deaminase [Synechococcus sp. CC9311]
Length = 316
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEYT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRYHYPHLQFKDVRGNVITRLEKLDSGNYDCLILAAAGLS 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + GQGA+ IE + P+ EL++V+NH T ERAFL
Sbjct: 179 RLGFGDRIHQSIPGNISLHAVGQGALGIECVCDRPEVMELIQVLNHAPTSARCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I +G T+ G+V + DGK + G D +GRD A ++
Sbjct: 239 RVLEGGCQVPIGVNTQIEGDTIQLTGMVASLDGKRLIRDEQAGPLADPEAVGRDLAHKLK 298
>gi|331270186|ref|YP_004396678.1| porphobilinogen deaminase [Clostridium botulinum BKT015925]
gi|329126736|gb|AEB76681.1| porphobilinogen deaminase [Clostridium botulinum BKT015925]
Length = 300
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 8/294 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + + H P N I +STKGDRI + L +IGGKGLF +E
Sbjct: 5 VGSRGSKLALTQTNWVIDKIKENH--PQVNFEIKIISTKGDRIQHMPLDKIGGKGLFVQE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFI-SHTAQSLKDLALHS 125
IE++LI+G+ID AVHS KDM T + + L+ S Y+P RED RDV I + +S+ +L +
Sbjct: 63 IEEQLINGQIDLAVHSMKDMSTDIPEELKFS-YVPVREDYRDVLILNKKYKSIDELPKGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
IGT S RRK LL +R+D+ ++ RG ++TR+ K+ I+LA AGIKRL E K+
Sbjct: 122 KIGTGSKRRKYQLLDYRNDLKIVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLEDKI 181
Query: 185 IKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +E PSP QG + +E + ++K I E + ERAFL ++G
Sbjct: 182 DYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEDEISTIQAEAERAFLKGVNG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C I T+ G++ D + G+ +A IG + A+ +
Sbjct: 242 GCHVPIGALCSINKDTVEVTGLLGKEDASKIVRKTLVGSIDEAEYIGYELAKIV 295
>gi|170783140|ref|YP_001711474.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157710|emb|CAQ02912.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 328
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 150/283 (53%), Gaps = 12/283 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA +TR+ ++ + ++P++T GD + +L+ +GG G+F
Sbjct: 14 LRIGTRGSALALA---QTRAIAAEITGASGLEVELVPVTTHGD-TSRESLSSLGGTGVFA 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L+ GE D VHS KD+PT GL +++ RED RDV + +L L +
Sbjct: 70 SALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRGA 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ +
Sbjct: 130 RVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIDRIGAA 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQEL----VKVINHEDTWDSVNCERAFLAELD 241
E L ++ +P +PGQGA+ +E + + + V+ ++ T +V ER LA L+
Sbjct: 190 TEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAALE 249
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNG 280
C + I +A + L +V DG HE+ G
Sbjct: 250 AGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAG 292
>gi|148271775|ref|YP_001221336.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829705|emb|CAN00621.1| hemC [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 328
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 150/283 (53%), Gaps = 12/283 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA +TR+ ++ + ++P++T GD + +L+ +GG G+F
Sbjct: 14 LRIGTRGSALALA---QTRAIAAEITGASGLEVELVPVTTHGD-TSRESLSSLGGTGVFA 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L+ GE D VHS KD+PT GL +++ RED RDV + +L L +
Sbjct: 70 SALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRGA 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ +
Sbjct: 130 RVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIGRIDAA 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQEL----VKVINHEDTWDSVNCERAFLAELD 241
E L ++ +P +PGQGA+ +E + + + V+ ++ T +V ER LA L+
Sbjct: 190 TEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAALE 249
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNG 280
C + I +A + L +V DG HE+ G
Sbjct: 250 AGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAG 292
>gi|242015312|ref|XP_002428308.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis]
gi|212512893|gb|EEB15570.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis]
Length = 356
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 150/270 (55%), Gaps = 6/270 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LAL+ + L + P I+ + T GD+I ++ L +IG K LFT
Sbjct: 7 LKVGSRKSQLALSQTQIIVNQLKE--NFPDLKFDIVTMLTTGDKILDKPLPKIGEKSLFT 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD---LA 122
+E+E L E+D VHS KD+PT L L I A L RED RD + + + K+ L
Sbjct: 65 KELEAALEKNEVDFVVHSLKDLPTSLPPNLTIGAILKREDPRDALVVNKNLNFKNVSSLP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A L R ++ V + RG + TRL KL+ +K I+LA AG+KRLK
Sbjct: 125 ESSVIGTSSLRRCAQLCRNYPNLKVENIRGNLNTRLKKLDEGDKYTGIVLAAAGLKRLKY 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I +IL + + GQGA+ +E + NN K ++++V+N T V ER+FL L
Sbjct: 185 DDRITQILEPNEMLYAVGQGALAVECNKNNEKVLDILEVLNDHSTILRVIAERSFLKTLG 244
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
G C + +A + LY G V + +G+
Sbjct: 245 GGCSAPVAVSTKLEEKELYLTGAVWSLNGE 274
>gi|126348046|emb|CAJ89766.1| putative porphobilinogen deaminase [Streptomyces ambofaciens ATCC
23877]
Length = 311
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PGVRTEVVPVKTTGDKWLG-DLSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+S E D AVH KD+P L G +A+L R+D+RD I +L +L
Sbjct: 64 KEVDAALLSDEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPDGLTLDELPA 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ +
Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVAGLERIGRRD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + H T + ER FL L G
Sbjct: 184 VISEVLSPETMMPPIGAGILALQCREGDTDLIEAVSGLGHPATHREASAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG+A +G L V DGK R D +G A
Sbjct: 244 CNSPIAGYARVDRGGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVA 294
>gi|48477321|ref|YP_023027.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790]
gi|55976421|sp|Q6L2G8|HEM3_PICTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|48429969|gb|AAT42834.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790]
Length = 282
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 8/259 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A + L D I + ++KGD + L IGG G+F
Sbjct: 3 IRIGTRSSKLAMIQAMMVKDRL-DSLGIETE---VKGFTSKGDINLDSPLYSIGGTGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++ + ++ EID AVHSAKD+P+ + L+ISA L R+D RDV IS SL DL S
Sbjct: 59 DDLNRMILKNEIDIAVHSAKDIPSFIDDSLEISAVLKRDDPRDVLISQ--HSLNDLEASS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR L R+DI + D RG I+TRL KL+N I++A A R++ +
Sbjct: 117 VIGTSSLRRIKELKTLRNDILIKDLRGNIDTRLKKLDNGDYDGIIMAKAAYDRMRINRR- 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
ILN +DF P+P QG I I + + + +++K IN ++T++ + ER L+ L+ C
Sbjct: 176 HFILNYDDFVPAPNQGIIAIISK-KDSEINDVLKKINDDETYNDMKAERLILSGLNLGCS 234
Query: 246 SAIAGFAYCKGSTLYFYGI 264
+ +A+ + FY +
Sbjct: 235 KPVGIYAHKNRIFMRFYSL 253
>gi|222529189|ref|YP_002573071.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725]
gi|222456036|gb|ACM60298.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725]
Length = 290
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 149/294 (50%), Gaps = 6/294 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG R S L+ + I +P+ TKGD ++L + G+
Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTLGIECE---FVPIKTKGDIDKTKSLKDFQSPGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L+S EID AVHS KD+P ++ I A + RED RDV +S L
Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDPRDVLVSKDGVGFYQLKP 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + +I + P PGQGAICIE ++P L K IN + + ER L L G
Sbjct: 179 HVSYVFDINEITPCPGQGAICIECLEDSPYKSILSK-INDVNAYIQTQFERLVLKLLGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S+I F +Y + +L D + + S G++ D +++ + ++
Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGDKLV--KASIEGDKADFLSLANKLSNMLK 289
>gi|116072875|ref|ZP_01470140.1| porphobilinogen deaminase [Synechococcus sp. BL107]
gi|116064401|gb|EAU70162.1| porphobilinogen deaminase [Synechococcus sp. BL107]
Length = 317
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + + GQGA+ IE N P+ +++KV+ H T ERAFL
Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENKPEVMDIIKVLEHGPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G D +IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREKASGPSTDPESIGLALATTLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 GLGAGEIL 306
>gi|294637953|ref|ZP_06716220.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685]
gi|291088885|gb|EFE21446.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685]
Length = 230
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 122/209 (58%), Gaps = 2/209 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ RI TR SPLAL A R L+ P I ++P+ T+GD + + L ++GGKG
Sbjct: 19 QQTLRIATRQSPLALWQAHYVRDQLLT--HWPQLTIELVPMVTRGDVLLDTPLAKVGGKG 76
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P GL + PRED RD F+S SL L
Sbjct: 77 LFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICPREDPRDAFVSPHFASLDQLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ E
Sbjct: 137 PGSIVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGEYDAIILAAAGLKRLQLE 196
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNN 211
I+ L E P+ GQGA+ IE + +
Sbjct: 197 ARIRTPLTAEQSLPAVGQGAVGIECRLAD 225
>gi|91774391|ref|YP_544147.1| porphobilinogen deaminase [Methylobacillus flagellatus KT]
gi|123253776|sp|Q1GXA1|HEM3_METFK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91708378|gb|ABE48306.1| hydroxymethylbilane synthase [Methylobacillus flagellatus KT]
Length = 310
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 151/277 (54%), Gaps = 2/277 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A + L ++ P + I+ ++T GD+I + L IGGKGL
Sbjct: 5 KTLVIASRESALAMWQAQYIQGRLQTLY--PETEVTILGMTTTGDQILDSPLARIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P L G ++A R+D RD F+S+ +L L
Sbjct: 63 FVKELEQALADGRADLAVHSMKDVPMHLPPGFALAAISERDDPRDAFVSNDYPNLASLPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 123 GSIVGTSSLRRQSQLQARFPGLKVESLRGNLQTRLRKLDEGQYAAIILAAAGLKRLGLAS 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+E ++ ++ P+ GQGA+ IE + +++ +NH +T V ER L GS
Sbjct: 183 RIRESIDPDNSIPAVGQGALGIEINAERLDLLKVLAPLNHPETAACVEAERGMSRALAGS 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
C+ + FA G TL G V + DGK F S G
Sbjct: 243 CQVPLGAFAQQHGDTLQMTGFVASIDGKEFLRESVQG 279
>gi|304317047|ref|YP_003852192.1| porphobilinogen deaminase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778549|gb|ADL69108.1| porphobilinogen deaminase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 297
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 147/254 (57%), Gaps = 6/254 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKG 62
K R+GTR S LAL +T + ++ K P+ I+ +STKGD + N L+EIGGKG
Sbjct: 2 KKIRVGTRSSELALT---QTLIVINEIKKYKPNIEFEIVKISTKGDSVLNAPLSEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE LI+ EID AVHS KDMP ++ L++ + RED RDVFIS + + + DL
Sbjct: 59 LFVKEIEDALINNEIDMAVHSMKDMPYEVPNDLKLLSVYRREDPRDVFISRSEKFI-DLK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ IGTSSLRR L R DI ++ RG I TR+ K++ I+LA +GIKRL E
Sbjct: 118 NNARIGTSSLRRSVQLKNLRPDIEIVPIRGNIATRIKKMHELNLDGIVLAASGIKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+IK+ ++ P+P QG + +E + + E+ ++ T+ + ER + +
Sbjct: 178 DMIKDYFPVDLIVPAPCQGILAVEIRRDFEEEFFEIYPMLLDAKTFFESSAERKIMKKFG 237
Query: 242 GSCKSAIAGFAYCK 255
G+CK + ++ K
Sbjct: 238 GNCKIPLGIYSEYK 251
>gi|187929644|ref|YP_001900131.1| porphobilinogen deaminase [Ralstonia pickettii 12J]
gi|309781590|ref|ZP_07676324.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA]
gi|187726534|gb|ACD27699.1| porphobilinogen deaminase [Ralstonia pickettii 12J]
gi|308919565|gb|EFP65228.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA]
Length = 338
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 151/264 (57%), Gaps = 3/264 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E
Sbjct: 28 IASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 85
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G +SA L RED RD FIS+ L L +V+
Sbjct: 86 LEVALAEGRADLAVHSLKDVPMELPEGFALSAILEREDPRDAFISNDYADLASLPAGAVV 145
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 146 GTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLVDRIRS 205
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ E+ P+ GQGA+ IE + + + ++ E T +V ERA L GSC+
Sbjct: 206 TIAPEESLPAAGQGALGIEIRADRADVRACLAPLHDEPTALAVTAERAVSRILGGSCQVP 265
Query: 248 IAGFA-YCKGSTLYFYGIVLASDG 270
+A FA + G TL V + DG
Sbjct: 266 LASFAQWSDGGTLRLRAFVASQDG 289
>gi|159036094|ref|YP_001535347.1| porphobilinogen deaminase [Salinispora arenicola CNS-205]
gi|157914929|gb|ABV96356.1| porphobilinogen deaminase [Salinispora arenicola CNS-205]
Length = 322
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 11/292 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + +L P + ++ + T GDR + G G+F
Sbjct: 4 PLRLGTRGSALAMAQSGQVAQALTAATGNP---VELVEVVTAGDR--SAAPVHRLGVGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L + ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALTARTIDFAVHSFKDLPTAAAPGLHVAAVPPRQDPRDALVARAGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKE 182
+ +GT +LRR A L + V RG + TRL ++ +A A++LA AG+ RL +
Sbjct: 119 ARVGTGALRRIAQLHALGLQLDVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLDRT 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L+
Sbjct: 179 DTITETLDPMLMLPAPAQGALAVECRSDDSDLVELLAVLDHAPSRATVVAERALLATLEA 238
Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
C + +A +A G +Y G V++ DG +SR G DA+ IG+
Sbjct: 239 GCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGK 290
>gi|313680762|ref|YP_004058501.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977]
gi|313153477|gb|ADR37328.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977]
Length = 303
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 10/300 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+GTR S LAL +TR ++ + + P I + TKGDR + I F
Sbjct: 6 VGTRGSLLALT---QTRWAVERLKENWPETEFKIKTIQTKGDRGADPREQNI-----FVG 57
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHS 125
E+E+ L GEID AVHS KD+PT +GL I+ R D RDVFI ++ + DL +
Sbjct: 58 ELEEALRRGEIDIAVHSLKDLPTTQPEGLVIAGVPRRVDPRDVFIGRNSVARMADLPKGA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR+A LL WR D+ ++ RG +++RL +L + I+LA AG+ RL+ I
Sbjct: 118 RIGTSSVRRRAQLLAWRDDLEIVPLRGNVDSRLKRLVSEDLDGIILAAAGLLRLEMRNRI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E P+PGQGA+ +E + A EL +NH T V ER FL L C
Sbjct: 178 GEFVDPEILLPAPGQGALALEVREGDDMADELAYSLNHAPTRARVLAERGFLHGLGAGCL 237
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ + A + L VL+ DGK G+ +A +G + A+ + + V
Sbjct: 238 APVGALAQIEDDVLVLDAGVLSLDGKTLIRGEIEGDPEEAWELGLELARDVLEAGGREVL 297
>gi|158337071|ref|YP_001518246.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017]
gi|158307312|gb|ABW28929.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017]
Length = 314
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL + L P + + +ST+GD I + L +IG KGLFT
Sbjct: 2 IRIGSRKSQLALVQTHWVQGELQK--HFPEYEFEVCTMSTQGDNILDVALAKIGDKGLFT 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122
+E+E ++ E D AVHS KD+PT L +GL + R D D + H A L L
Sbjct: 60 KELEVSMLRKETDLAVHSLKDLPTNLPEGLCLGVVTERVDPADALVVHENFKAYQLDTLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L + D RG + TRL KL+ + I+LA AG++RL
Sbjct: 120 EGAVIGTSSLRRLAQLRYNYPHLEFKDIRGNLNTRLQKLDEGEYDGIILAVAGLQRLGFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +++ + GQGA+ IE + + +K + HE + ER+FL EL+G
Sbjct: 180 DRIHQVIPANISLHAVGQGALGIECREGDEEIMAFIKALEHEPSAHRCTAERSFLHELEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ I K L G+V + DGK + + +G A +G D AQ +R
Sbjct: 240 GCQVPIGVNTSLKEGQLTLVGMVASLDGKRLIKDTVSGPIASATQLGIDLAQKVR 294
>gi|86158914|ref|YP_465699.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775425|gb|ABC82262.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 314
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 150/291 (51%), Gaps = 3/291 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P L GL +++ RED RD S ++L L +
Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLASVPQREDPRDALCSPRWKTLAALPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEVVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E ++ + + + +T + ER FLA ++G C+
Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLKRLAALEDPETRVRIEAERGFLARIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
IAG A G + +V + DG R G +A +G A+ +
Sbjct: 239 VPIAGHATLAGGKITIRALVASLDGTRVIRGERTGAYAEARALGESLAEEL 289
>gi|283955967|ref|ZP_06373457.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792627|gb|EFC31406.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336]
Length = 307
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 148/266 (55%), Gaps = 6/266 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E
Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I
Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK +L R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K +
Sbjct: 122 GTTSLRRKMQILLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQVNF 181
Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+
Sbjct: 182 VYGFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
I A G + ++ DG+
Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDGR 266
>gi|325266571|ref|ZP_08133248.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394]
gi|324982014|gb|EGC17649.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394]
Length = 313
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 7/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF
Sbjct: 7 LTIASRESALAMWQAEHIQAKLQALY--PSCTVDILGMTTQGDQILDKTLSKIGGKGLFI 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L D AVHS KD+P L +G + A R + D +S+ + L++L +
Sbjct: 65 KELETALQENRADLAVHSLKDVPMDLPEGFVLVAVGERANPFDALVSNRFERLEELPEGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A L + V RG ++TRL KL+N AI+LA AG++RL+ I
Sbjct: 125 VVGTSSLRREAQLRARFPHLQVKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLQLHGRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GSC+
Sbjct: 185 RNLLPPSDSLPAAGQGALGIEIAAHRTDLVDILLPLNHAQTAACVTAERALARALGGSCQ 244
Query: 246 SAIAGFAYCKG---STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ AYC L +G+V DG + + A +GR A+ +
Sbjct: 245 VPLG--AYCTADEYGLLTLHGLVAHPDGSVVMTANAQAPAPYADALGRAVAKKL 296
>gi|37522781|ref|NP_926158.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421]
gi|55976479|sp|Q7NGF7|HEM3_GLOVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|35213783|dbj|BAC91153.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421]
Length = 328
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 155/304 (50%), Gaps = 7/304 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL R L H P I+ + T+GD+I + L +IG KGLFT+E
Sbjct: 7 IGSRDSQLALVQTHWVRDELQRAH--PDIRFEIVEMKTQGDKILDVALAKIGDKGLFTKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALH 124
+E ++ D AVHS KD+PT L GL + A RED D I A L DL
Sbjct: 65 LESAMLEKRTDLAVHSLKDLPTALPPGLILGAITEREDPSDAVIVRRGLEAAGLADLPEG 124
Query: 125 SVIGTSSLRRKALLL-RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++RL +
Sbjct: 125 AVVGTSSLRRLAQLKHHYGERLRFQDIRGNLNTRLRKLDEGRYDAIVLAVAGMRRLGWSE 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E+L+ + + GQGA+ IE + + +L+ V+NH T ERA L L+G
Sbjct: 185 RISEVLSPDISLHAVGQGALGIECREADGEILDLLTVLNHPPTARRCRAERAMLRALEGG 244
Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + S L GIV + DG+ R+G +GR A+ ++ +
Sbjct: 245 CQVPIGVYTELDDSGRLTLQGIVASLDGRNMARACRSGPGDAPEALGRAVAEDLKAAGAQ 304
Query: 303 NVFN 306
+ +
Sbjct: 305 AILD 308
>gi|254525987|ref|ZP_05138039.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202]
gi|221537411|gb|EEE39864.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202]
Length = 318
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 157/296 (53%), Gaps = 5/296 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LA+ + L IP ++ I ++T+GD+I + L +IG KGLFT
Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--RNIPNLDVSIEAMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +++ G D AVHS KD+PT L GL++ RED D + + L+ L
Sbjct: 64 KELEAQMLVGHADIAVHSLKDLPTNLPTGLKLGCITKREDPADALVVSKKNDCYKLETLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+KRL E
Sbjct: 124 EGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL EL+G
Sbjct: 184 SRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFLRELEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C+ I + LY G+V + DGK + GN + +G + A+ ++F
Sbjct: 244 GCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLKF 299
>gi|317969656|ref|ZP_07971046.1| porphobilinogen deaminase [Synechococcus sp. CB0205]
Length = 317
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 152/300 (50%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H I I ++T+GD+I + L +IG
Sbjct: 1 MAGSQLRIASRRSQLAMVQTHWVRDELAKAH--AGLEITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H K
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118
Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
LA +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + K E +KV+ H T ERAFL
Sbjct: 179 RLGLSDRIHELIDPSISLHAVGQGALGIECRDGDAKVLEQIKVLEHVPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK G++ + +G D A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGKRLIRDQVQGDQTNPEALGIDLAHKLK 298
>gi|157414826|ref|YP_001482082.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81116]
gi|172047086|sp|A8FKW8|HEM3_CAMJ8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157385790|gb|ABV52105.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81116]
gi|307747464|gb|ADN90734.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni M1]
gi|315931740|gb|EFV10695.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 327]
Length = 307
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E
Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I
Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPRGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K +
Sbjct: 122 GTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNF 181
Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+
Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I A G + ++ DG
Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265
>gi|148238945|ref|YP_001224332.1| porphobilinogen deaminase [Synechococcus sp. WH 7803]
gi|147847484|emb|CAK23035.1| Porphobilinogen deaminase [Synechococcus sp. WH 7803]
Length = 319
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 158/300 (52%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 3 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 61 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEHT 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+
Sbjct: 121 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 180
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL
Sbjct: 181 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 240
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + G+ L G+V + DG+ R G+ D IGR A ++
Sbjct: 241 RELEGGCQVPIGVNSRIDGTELILTGMVASLDGQRLIRDERRGSLTDPEAIGRALAADLK 300
>gi|86148990|ref|ZP_01067222.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|86153229|ref|ZP_01071433.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88597145|ref|ZP_01100381.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562197|ref|YP_002343976.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|12643831|sp|Q9PHW9|HEM3_CAMJE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85840348|gb|EAQ57605.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85842955|gb|EAQ60166.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88190834|gb|EAQ94807.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359903|emb|CAL34691.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|315927042|gb|EFV06397.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315928698|gb|EFV07978.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 305]
Length = 307
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E
Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I
Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K +
Sbjct: 122 GTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNF 181
Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+
Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I A G + ++ DG
Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265
>gi|313199811|ref|YP_004038469.1| porphobilinogen deaminase [Methylovorus sp. MP688]
gi|312439127|gb|ADQ83233.1| porphobilinogen deaminase [Methylovorus sp. MP688]
Length = 320
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF +E
Sbjct: 15 IASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLFVKE 72
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L S++
Sbjct: 73 LEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAGSIV 132
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL I +
Sbjct: 133 GTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNRIAQ 192
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ED P+ GQGA+ IE + ++ +NH DT V ER L GSC
Sbjct: 193 TIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSCTVP 252
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A G + +G V + DGK GN +G+ AQ +
Sbjct: 253 LGAYATKLGENITIHGFVASVDGKQMLRAEATGNAAKPELLGQQLAQSL 301
>gi|260435886|ref|ZP_05789856.1| porphobilinogen deaminase [Synechococcus sp. WH 8109]
gi|260413760|gb|EEX07056.1| porphobilinogen deaminase [Synechococcus sp. WH 8109]
Length = 317
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 149/292 (51%), Gaps = 5/292 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + +T A
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNTKNHAYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L SV+GTSSLRR A L + D RG + TRL KL+N ++LA AG+
Sbjct: 119 LDTLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDNGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE P+ E +KV+ H T ERAFL
Sbjct: 179 RLGFGDRIHQLIPGDISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
EL+G C+ I +G L G+V + DGK +G DA IG
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQASGAASDAEAIG 290
>gi|300690776|ref|YP_003751771.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum PSI07]
gi|299077836|emb|CBJ50474.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum PSI07]
Length = 334
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 3/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E
Sbjct: 24 IASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 81
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G + L RED RD F+S+ L L +V+
Sbjct: 82 LEVALAEGRADLAVHSLKDVPMELPAGFALPTILEREDPRDAFVSNHYADLAALPAGAVV 141
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + I+
Sbjct: 142 GTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERIRA 201
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+ GQGA+ IE + P Q + ++H T +V ERA L GSC+
Sbjct: 202 VIAPEASLPAAGQGALGIEIRADRPDVQAWLAPLHHAPTALAVTAERAVSRRLGGSCQVP 261
Query: 248 IAGFA-YCKGSTLYFYGIVLASDGK 271
+A FA + L V + DG+
Sbjct: 262 LAAFAQWTDDGALRLRAFVASQDGR 286
>gi|57238255|ref|YP_178664.1| porphobilinogen deaminase [Campylobacter jejuni RM1221]
gi|121612975|ref|YP_001000245.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|148925915|ref|ZP_01809602.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|167005201|ref|ZP_02270959.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|205355401|ref|ZP_03222172.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|81557551|sp|Q5HVM1|HEM3_CAMJR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513884|sp|A1VYQ4|HEM3_CAMJJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|57167059|gb|AAW35838.1| porphobilinogen deaminase [Campylobacter jejuni RM1221]
gi|87250005|gb|EAQ72963.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|145844901|gb|EDK22005.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205346635|gb|EDZ33267.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|284925807|gb|ADC28159.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315057963|gb|ADT72292.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni S3]
Length = 307
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E
Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I
Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K +
Sbjct: 122 GTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNF 181
Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+
Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I A G + ++ DG
Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265
>gi|294496111|ref|YP_003542604.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219]
gi|292667110|gb|ADE36959.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219]
Length = 308
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 153/266 (57%), Gaps = 8/266 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LALA A +T L+D P +I T GD T+R L E+ G G F E
Sbjct: 3 IGTRGSDLALAQA-KTVEGLLDSRGFPTTRKII---KTSGDTFTDRPLHEVEGVGAFVRE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ +++SGEID AVHS KD+PT+ L I+A + R+ D+ +++ +L +L +++
Sbjct: 59 LDDRMLSGEIDIAVHSMKDLPTERPAELSIAAVIERDSPHDLLLTNDGSTLDELPEGAIV 118
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+S+RR+A LR+R D+ V D RG I TRL KL + AI+LA AG++R+ + +
Sbjct: 119 GTTSMRRRAQFLRYRPDLDVQDLRGNINTRLKKLESGMYDAIILAEAGLQRMGWD-IECH 177
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+ ++F PS QG I + T + +A+ L I+H ++ + ER + +++G C
Sbjct: 178 RLDGDNFCPSANQGTIAVVT-LAGGEAELLCSQIDHTESRIATEVERLVIRDVEGGCIVP 236
Query: 248 IAGFA--YCKGSTLYFYGIVLASDGK 271
+ FA G+ ++ +L+ DGK
Sbjct: 237 VGSFAEFVDNGNKIHIRAEILSLDGK 262
>gi|120437548|ref|YP_863234.1| porphobilinogen deaminase [Gramella forsetii KT0803]
gi|117579698|emb|CAL68167.1| porphobilinogen deaminase [Gramella forsetii KT0803]
Length = 305
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 162/293 (55%), Gaps = 8/293 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + +L H ++P+ + GD ++ L E+G G+
Sbjct: 3 KVIRIGTRDSELALWQAKTVQKALEST----GHQTELVPVKSTGDLNLDQPLYEMGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +I+G++D AVHS KD+PT L KG+ +A + R + +D+ I + L++
Sbjct: 59 FTKTLDVAMINGDVDIAVHSMKDVPTALPKGIVEAAIMKRANSKDLLIHKGVEFLEN--E 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRRKA L + V+D RG + TR+ KLN+N + + A AG++R++ +
Sbjct: 117 EGTIATGSLRRKAQWLHKYPNHKVVDLRGNVNTRMQKLNDNNWNGAIFAAAGLERIEIKP 176
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +++ P+P QGA+ I + + + V+NH+++ V+ ER FL L+G
Sbjct: 177 --ENFIDLNWMIPAPAQGAMLIVAMEEDEYCRRALSVLNHKESELCVHVEREFLKTLEGG 234
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + I A + ++F+G + + DGK EV R+ + ++G++ AQ I
Sbjct: 235 CTAPIGALAKILNNHVHFHGALFSLDGKKKMEVERSLPVAEIEDMGKECAQEI 287
>gi|284929513|ref|YP_003422035.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A]
gi|284809957|gb|ADB95654.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A]
Length = 318
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 5/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL + + L + P + I +ST+GD I + L +IG KGLFT
Sbjct: 8 IRIGSRKSQLALVQTYWIQEQLQKHY--PNYEFQIETMSTQGDNILDVALAKIGDKGLFT 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E ++ ID AVHS KD+PT L +GL + RE+ D + + L L
Sbjct: 66 KELEVAMLQNRIDFAVHSLKDLPTNLPEGLMLGCITERENPADALVVNEKYKNNKLDTLP 125
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S+IGTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KRL +
Sbjct: 126 EGSIIGTSSLRRLAQLRHHYPYLIFKDVRGNVNTRLAKLDAGEYDAIILAAAGLKRLNMD 185
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +I+ + + GQGA+ IE + + EL++V+ H +T ER+FL L+G
Sbjct: 186 NRIHQIIPEDISLHAVGQGALGIECRAADSRILELLEVLKHSETHYRCMGERSFLRALEG 245
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ I + + L GIV + DGK + + +G+ A N+G + + +R
Sbjct: 246 GCQVPIGVTTKIECNILTLTGIVASLDGKTMLKNTVSGHMEQAENLGYELSVCLR 300
>gi|297543913|ref|YP_003676215.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841688|gb|ADH60204.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 299
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 138/252 (54%), Gaps = 5/252 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++GTR S LAL T+ + ++ K I+ ++T+GD + ++ ++EIGGK
Sbjct: 2 KKVIKVGTRSSELALVQ---TQMVINEIKKFRQDFEFEIVKITTQGDALIDKPVSEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL
Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + QE I T+ + ER L
Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVF 238
Query: 241 DGSCKSAIAGFA 252
+C+ +A
Sbjct: 239 GVNCRQPFGAYA 250
>gi|302543510|ref|ZP_07295852.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC
53653]
gi|302461128|gb|EFL24221.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC
53653]
Length = 322
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 162/305 (53%), Gaps = 17/305 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + ++ ++ P + ++ ++T GD ++ L +IGG G+F
Sbjct: 8 PLRLGTRRSALAMAQSGLIADAVRELTGRP---VELVEITTYGD-VSREQLAQIGGTGVF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+SGEID AVHS KD+PT +GL ++A RED RD I+ + + L
Sbjct: 64 VSALREALLSGEIDFAVHSLKDLPTAEPEGLTLAAIPRREDPRDALIARDGLTFEQLPPG 123
Query: 125 SVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR A L W RS D+ + RG + TR+ + + + A++LA AG+ RL
Sbjct: 124 ARIGTGSPRRAAQLNAWARSVGLDVETVPIRGNVGTRIGYVRSGELDAVVLAAAGLSRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ EIL+ + P+PGQGA+ +E ++ + L+ ++ T +V ER+ LA L
Sbjct: 184 RIGEATEILDADHVLPAPGQGALAVECAADDAELTALLAGLDDPHTRAAVTAERSLLAAL 243
Query: 241 DGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRD 291
+ C + + A G + + G+V +DG ++S G + A ++GR+
Sbjct: 244 EAGCSAPVGALADLLGDGQVVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPDQAADLGRE 303
Query: 292 AAQYI 296
A +
Sbjct: 304 LAAEM 308
>gi|296282337|ref|ZP_06860335.1| porphobilinogen deaminase [Citromicrobium bathyomarinum JL354]
Length = 292
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 136/254 (53%), Gaps = 3/254 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD++ +R L ++GGK L+T E++ L G
Sbjct: 1 MAQAHETRARLCAAHGWDESAVELVPVVAGGDKVQDRPLADVGGKALWTRELDAWLDEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T + + ++A LPR D RDV + A SL+ + + +GTS+ RR A
Sbjct: 61 IDAAVHSLKDVETIRPEWITLAAILPRADRRDVLLG--ASSLRSIPQGATLGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+ R DI + FRG + TR+ KL +A LLA AG++RL +E V L +E + P
Sbjct: 119 QMKNLRPDIETVLFRGNVATRMAKLQAGEADVTLLAAAGLERLGQESV-GTPLPLETWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+P QGAI IE + + + +N T V ERA L L GSC S +
Sbjct: 178 APSQGAIGIECRTEDSVTRGHLDALNDAPTRREVEAERALLEALGGSCHSPVGVLVENAD 237
Query: 257 STLYFYGIVLASDG 270
L+ + ++DG
Sbjct: 238 EGLHMRAALFSADG 251
>gi|269796870|ref|YP_003316325.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542]
gi|269099055|gb|ACZ23491.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542]
Length = 312
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 146/278 (52%), Gaps = 12/278 (4%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P RIGTR S LAL +T + D+ ++ + I+P++T GD +T +L+++G
Sbjct: 1 MTGHPALRIGTRSSLLALT---QTGTVADDLRRLTGRPVEIVPVTTDGDVLTG-SLSQMG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + L+ D AVHS KD+PT + GLQ + R+D RD S L
Sbjct: 57 GTGVFVTALRAALLDDRCDVAVHSLKDLPTAGVLGLQHVTPV-RQDPRDALCSRAGHRLA 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
DL + +GT S RR A L R D+ V+D RG I+TRL +++ A++LA AG+
Sbjct: 116 DLPHGARVGTGSPRRAAQLRLVRPDLDVVDIRGNIDTRLGRVHPETGDLDAVVLAAAGLN 175
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----NPKAQELVKVINHEDTWDSVNCE 233
R+ +E I E++++ D P+PGQGA+ +ET + +P ++ T SV E
Sbjct: 176 RIGREHAITELISVTDMAPAPGQGALAVETRSSLLEEDPVVARAFDQLDDPATSLSVLAE 235
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
RA LA L+ C + + A L + +V DG
Sbjct: 236 RALLARLEAGCAAPVGTHATVSDGLLTLHAVVARPDGS 273
>gi|258651772|ref|YP_003200928.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233]
gi|258554997|gb|ACV77939.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233]
Length = 305
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 145/283 (51%), Gaps = 7/283 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMD-VHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + R+GTR S LALA + + D V ++ + ++ + T+GD + L IG
Sbjct: 1 MSSRVLRVGTRGSALALAQS----GMIADRVARLAGATVELVRIRTEGD-VNTGPLATIG 55
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + + L+ G D VHS KD+PT +G+ ++A RE D + L
Sbjct: 56 GTGVFVTGVREALLDGRADIVVHSYKDLPTAPTEGITVAAVPERESPFDALCARDGLRLD 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL S +GT S RR A LL R D++V+ RG ++TRL +++ A++LA AG+ RL
Sbjct: 116 DLPRGSTVGTGSPRRAAQLLARRPDLAVVPIRGNVDTRLRQVSEGHLDAVVLAAAGLNRL 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLA 238
+ I ++L+ + P+P QGA+ +E + E + ++ T +V ER L
Sbjct: 176 GRADAITDVLDADRMLPAPAQGALAVECRSGADTWFTEATRTLDDAPTRAAVVAERVLLR 235
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
+L+ C + + FA +G L +V+A DG V R G+
Sbjct: 236 DLEAGCSAPVGAFAQVQGDALTLRAVVVAVDGSSEFRVHRAGS 278
>gi|61653263|gb|AAX48216.1| porphobilinogen deaminase [uncultured proteobacterium
DelRiverFos06H03]
Length = 314
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 138/257 (53%), Gaps = 4/257 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A + L + H + ++ ++T GD+I ++ L++IGGKGLF +E
Sbjct: 7 IATRESRLALWQANHVKELL----ECQGHQVELLGMTTLGDQILDQPLSQIGGKGLFIKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G AVHS KD+P L +G +++ L RED RD ++S +SL L +V+
Sbjct: 63 LEVALADGSAHLAVHSLKDVPMDLPEGFELACILEREDPRDAWVSPRFESLDSLPPGAVV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR LL R D+ + RG ++TRL KL+ + I+LA AG+KRL + I+
Sbjct: 123 GTSSLRRTVLLKALRPDLKIEPLRGNLDTRLRKLDEGQYAGIVLASAGLKRLGLKDRIRY 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ P+ GQGAI IE P L+ +NH T V ER + GSC
Sbjct: 183 SFPLNTMTPAAGQGAIGIEICDKRPDLAHLLSNLNHLPTAVQVYAERGVSRTMGGSCSMP 242
Query: 248 IAGFAYCKGSTLYFYGI 264
+A A + L + I
Sbjct: 243 LAAHATLETGLLSIHAI 259
>gi|33866317|ref|NP_897876.1| porphobilinogen deaminase [Synechococcus sp. WH 8102]
gi|39931373|sp|Q7U5C2|HEM3_SYNPX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33639292|emb|CAE08300.1| Porphobilinogen deaminase [Synechococcus sp. WH 8102]
Length = 317
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNANHK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L +S D RG + TRL KL++ ++LA AG++
Sbjct: 119 LDTLPEGAVVGTSSLRRLAQLRHHYPHLSFKDVRGNVITRLEKLDSGDYDCLILAAAGLE 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + + GQGA+ IE + P+ E++KV+ H T ERAFL
Sbjct: 179 RLGFGNRIHQIIPGDISLHAVGQGALGIECVEDKPEVLEIIKVLEHTTTSRRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK +G+ D +IG + A ++
Sbjct: 239 RELEGGCQVPIGVNSQINNEELTLTGMVASLDGKRLIRDEASGSAADPESIGIELAGKLK 298
>gi|322379565|ref|ZP_08053902.1| porphobilinogen deaminase [Helicobacter suis HS1]
gi|322380567|ref|ZP_08054732.1| porphobilinogen deaminase [Helicobacter suis HS5]
gi|321147006|gb|EFX41741.1| porphobilinogen deaminase [Helicobacter suis HS5]
gi|321147959|gb|EFX42522.1| porphobilinogen deaminase [Helicobacter suis HS1]
Length = 302
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 148/267 (55%), Gaps = 5/267 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP IG+R S LAL A ++ L + + VI + TKGD+I + L +IGGKGL
Sbjct: 2 KPLIIGSRGSALALWQARYIQTQLESLGLLS----VIEVVKTKGDKILDVPLAKIGGKGL 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ L+S +ID AVHS KD+P + ++ L ++ R D RD F+S + + KDL
Sbjct: 58 FTKELEELLLSKDIDLAVHSLKDVPVEFVEPLDLACVSVRADARDCFLSFKSPNFKDLPK 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR L R R D+ + RG ++TRL +L + AI+LA AG++RL+ +
Sbjct: 118 GAKVGTTSLRRSMQLKRKRPDLDTLSLRGNVQTRLKRLEAGEFDAIVLACAGVERLQIKV 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ IE+ P GQGA+ +E ++P + +N + ER F+ +L G
Sbjct: 178 PYQIPFEIEEMIPCMGQGALGVEMCTSHPLFNTIAG-LNDSTSAFLCGVERLFVKKLGGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C+ I A KG L +V DG
Sbjct: 237 CQVPIGVHASLKGDHLEICAVVGLVDG 263
>gi|283798144|ref|ZP_06347297.1| hydroxymethylbilane synthase [Clostridium sp. M62/1]
gi|291074124|gb|EFE11488.1| hydroxymethylbilane synthase [Clostridium sp. M62/1]
gi|295091711|emb|CBK77818.1| hydroxymethylbilane synthase [Clostridium cf. saccharolyticum K10]
Length = 298
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 140/261 (53%), Gaps = 6/261 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+G+R S LA+ A ++ P + ++ + T GDRI N++L +IGGKGL
Sbjct: 3 KKVRVGSRDSLLAVRQAELVMEAVRKAS--PETELTLVTMKTTGDRILNQSLDKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L+ G D +VHS KDMP ++ + L I AY PRED RDV + + L +L
Sbjct: 61 FVKELDLALMEGRSDLSVHSLKDMPMEIPEELPILAYSPREDNRDVLVLR--EGLSELPA 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
H VIGT S RRK R D RG I TRL KL++ + A++LA AG+ R+ +
Sbjct: 119 HPVIGTGSARRKIQAARIYPDAEFKGIRGNIHTRLRKLDSGEYDALILAAAGMIRMGLQD 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++E+ P GQG + ++ ++ + + IN + ER+F+ LDG
Sbjct: 179 RISRYFSVEEIIPPAGQGIMAVQGRKDD--SYPFLIKINSPKSQAMAEAERSFVKTLDGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGI 264
C S IA A +G L G+
Sbjct: 237 CSSPIAACALIEGDRLKLRGL 257
>gi|327403451|ref|YP_004344289.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823]
gi|327318959|gb|AEA43451.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823]
Length = 304
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 145/255 (56%), Gaps = 12/255 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL A + L + + I ++TKGD+I + + ++ GKG FT
Sbjct: 4 IRIGSRGSDLALWQANHVKKQLEALGA----EVGITIITTKGDQIQDLSFDKLEGKGFFT 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD----L 121
+EIE+ L+ ID AVHS KD+ T +GL I+A RE+ DV + H KD L
Sbjct: 60 KEIEQALLDNSIDLAVHSHKDLETNTPEGLIIAAVSERENPADVLLIHPNAFDKDEFWSL 119
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSS RRK+ ++ +RSDI + D RG + TRL KL + AILLA AG+ RL+
Sbjct: 120 KKGAVVGTSSARRKSQVIAFRSDIEIKDLRGNVPTRLQKLIDGGYDAILLAKAGLDRLQL 179
Query: 182 E-KVIKE-ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ K + E +L+ E+F P+P QG + ++ N+ + ++ +NHED + ER L
Sbjct: 180 DLKGMHEVVLDPEEFIPAPAQGVLALQIRENDNELYNFMQAMNHEDIQSQIALERNLLNR 239
Query: 240 LDGSCKSAIAGFAYC 254
L G C+ + AYC
Sbjct: 240 LQGGCQLPLG--AYC 252
>gi|315023924|gb|EFT36926.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-YM]
gi|325335710|gb|ADZ11984.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-GD]
Length = 306
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 158/297 (53%), Gaps = 16/297 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ K +IGTR SPLAL A E ++L + + I+P+ + GD+ + L +G
Sbjct: 3 LMKNTIKIGTRNSPLALWQAKEVAAALEQKN----YATEIVPIVSSGDKNLTQPLYSLGI 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + + + KD
Sbjct: 59 TGVFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSS--NAKD 116
Query: 121 LALHSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+
Sbjct: 117 KSLEELTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRM 176
Query: 180 KKEKVIKEILNIEDFP---PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+ + E P +P QG + + H +N + E+VK INH T V ER F
Sbjct: 177 ALD------IPYEHLPFMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQF 230
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
L L+G C + I FA + F G + + +GK E++ N G + A
Sbjct: 231 LNRLEGGCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELA 287
>gi|54310580|ref|YP_131600.1| putative porphobilinogen deaminase [Photobacterium profundum SS9]
gi|46915023|emb|CAG21798.1| putative porphobilinogen deaminase [Photobacterium profundum SS9]
Length = 234
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PSLVVELVPMVTKGDIILDTPLAKVGG 89
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ +
Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209
Query: 181 KEKVIKEILNIEDFPPSPGQGA 202
I+ + E+ P+ GQGA
Sbjct: 210 MHDRIRSAIEPEESLPAVGQGA 231
>gi|327290907|ref|XP_003230163.1| PREDICTED: porphobilinogen deaminase-like, partial [Anolis
carolinensis]
Length = 351
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 144/274 (52%), Gaps = 6/274 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
++ + R+GTR S LA L H P + II ++T GD+I + L++IG
Sbjct: 7 LKNQTIRVGTRKSQLARIQTDSVVEMLQKHH--PQLHFEIIGMTTTGDKILDTALSKIGE 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++
Sbjct: 65 KSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPHDAVVFHPKHVGKT 124
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGI 176
L L SVIGTSSLRR A L R + D RG + TRL KL+ + AI+LA AG+
Sbjct: 125 LSSLPDKSVIGTSSLRRAAQLKRAFPQLQFKDIRGNLNTRLKKLDEKDDFSAIVLATAGL 184
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+R+ E I +IL + + GQGA+ +E + + E+V V++ +T ERAF
Sbjct: 185 RRMGWEDRIGQILTPMECLYAVGQGALAVEVRARDQEILEMVSVLHDGETVLRCIAERAF 244
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+ L+G C +A K S LY G V + DG
Sbjct: 245 MKHLEGGCSVPVAVSTTLKDSQLYLTGAVYSLDG 278
>gi|326804046|ref|YP_004321864.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650262|gb|AEA00445.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a]
Length = 332
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 155/289 (53%), Gaps = 26/289 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+RIGTR S LA+ + E +L V+ P ++ LSTKGD+ + L++IGGKG+F
Sbjct: 4 YRIGTRSSRLAMQQSLEVVRALEAVY--PQDEFQLVKLSTKGDKDKSSPLSKIGGKGVFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
IE+ L G++D VHS KD+P++L +G ++A R+D DV ++ DL +
Sbjct: 62 RWIEQALAQGKVDFIVHSLKDVPSELAQGTVLAAIPKRQDPGDVILTAKGMDWHDLPNGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK----- 180
+GT SLRR A L R D+ ++ RG I++RL+KL A++LA AG+KRL+
Sbjct: 122 RVGTGSLRRLAQLHALRPDLEIVHVRGNIDSRLDKLARGDFQALVLATAGLKRLQLLDYP 181
Query: 181 -------KEKVIKE--ILN----------IEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
+++V E ILN +++ P+ GQGA+ ++ ++ + +E+++ +
Sbjct: 182 FDSQRFNQKEVNSEAHILNNYELQAHAFSLDEMIPAVGQGALAVQCLNDDQQTREVLQAV 241
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+ +T +V CER L L C + + KG + ++ DG
Sbjct: 242 DDPETHQAVACERVVLKALGADCNYPVGAYGQIKGQEINLTAMIGRQDG 290
>gi|148544908|ref|YP_001272278.1| porphobilinogen deaminase [Lactobacillus reuteri DSM 20016]
gi|184154245|ref|YP_001842586.1| porphobilinogen deaminase [Lactobacillus reuteri JCM 1112]
gi|227364048|ref|ZP_03848148.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3]
gi|325683253|ref|ZP_08162769.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A]
gi|167008814|sp|A5VM67|HEM3_LACRD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229836109|sp|B2G9H4|HEM3_LACRJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|60172703|gb|AAX14537.1| HemC [Lactobacillus reuteri]
gi|148531942|gb|ABQ83941.1| hydroxymethylbilane synthase [Lactobacillus reuteri DSM 20016]
gi|183225589|dbj|BAG26106.1| porphobilinogen deaminase HemC [Lactobacillus reuteri JCM 1112]
gi|227070970|gb|EEI09293.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3]
gi|324977603|gb|EGC14554.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A]
Length = 305
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 150/266 (56%), Gaps = 4/266 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LA+A +SL + P I + T+GDR + +L +IGGKG+F +E
Sbjct: 7 VGSRKSKLAMAQTELVIASLEKI--FPDIKFEIKNVITEGDRNRHVSLAKIGGKGVFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLALHSV 126
IE +L G ID AVHS KD+ L + L + A+ R D +S SL DL +
Sbjct: 65 IEDELKDGTIDFAVHSLKDVMPILPEELVLGAFPKRVSPYDCLVSRKNLSSLNDLPKGAR 124
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT+SLRR+ LL R D+ +I RG I+TRL K++ I+LA AG+ RL +
Sbjct: 125 IGTNSLRRQGQLLSIRPDLKIIPIRGNIDTRLRKIDTEALDGIILAEAGLTRLNIDLSSY 184
Query: 187 EILNIEDF-PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+++++ P+ GQG + IE N+ + ++++ IN E++ V ER F+ EL GSC
Sbjct: 185 HVLDLQNYIMPAVGQGCLAIECRKNDTRIRKMLDQINDEESAYCVQVEREFMRELGGSCN 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
I G AY K + F G++ + +G+
Sbjct: 245 FPIGGHAYAKNGQILFDGLIASPNGE 270
>gi|313206850|ref|YP_004046027.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868]
gi|312446166|gb|ADQ82521.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868]
Length = 303
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 157/295 (53%), Gaps = 16/295 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +IGTR SPLAL A E ++L + + I+P+ + GD+ + L +G G
Sbjct: 2 KNTIKIGTRNSPLALWQAKEVAAALEQKN----YATEIVPIVSSGDKNLTQPLYSLGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + + + KD +
Sbjct: 58 VFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSS--NAKDKS 115
Query: 123 LHSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
L + I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+
Sbjct: 116 LEELTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMAL 175
Query: 182 EKVIKEILNIEDFP---PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + E P +P QG + + H +N + E+VK INH T V ER FL
Sbjct: 176 D------IPYEHLPFMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLN 229
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
L+G C + I FA + F G + + +GK E++ N G + A
Sbjct: 230 RLEGGCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELA 284
>gi|257463595|ref|ZP_05627986.1| porphobilinogen deaminase [Fusobacterium sp. D12]
gi|317061149|ref|ZP_07925634.1| porphobilinogen deaminase [Fusobacterium sp. D12]
gi|313686825|gb|EFS23660.1| porphobilinogen deaminase [Fusobacterium sp. D12]
Length = 301
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 4/266 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K +G+R S LALA + L P I + T+GD+ +E+
Sbjct: 1 MLKHHIILGSRGSILALAQTNWVKKQLQ--RHYPQLTFSIQVIETQGDKDLTSHFGNSEL 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV +S + ++L
Sbjct: 59 SLKSFFTKEIEKSLLDGEIDIAVHSMKDVPSSSPVGLICGAIPVREDVRDVLVSTSGKTL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL S++GTSSLRR + + R D+ + RG I TRL KL AI+LA AG+KR
Sbjct: 119 ADLPKGSILGTSSLRRIQNIKQLRPDLEIKALRGNIHTRLKKLEEGHYDAIVLAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E+ I E LN F P+P QGA+ I+ + + + +++ I+ E+ + ER F
Sbjct: 179 VGLEEKITEYLNPTVFSPAPAQGALYIQCREKDEETRNILQSIHDENLAKILEIEREFSR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGI 264
DG C + + ++ +G ++F+ +
Sbjct: 239 IFDGGCHTPMGCYSKVEGKKIFFHAM 264
>gi|84494981|ref|ZP_00994100.1| porphobilinogen deaminase [Janibacter sp. HTCC2649]
gi|84384474|gb|EAQ00354.1| porphobilinogen deaminase [Janibacter sp. HTCC2649]
Length = 329
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L + H++ ++ ++T GDR L +GG G+F
Sbjct: 3 LRLGTRRSALATTQSGWVADQLRALG----HDVELVEITTDGDRDRTTPLATMGGTGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L +G +D AVHS KD+PT L ++A PRED RD ++ +L +L S
Sbjct: 59 SALRDALRAGTVDLAVHSLKDLPTTPEDDLAVAAIPPREDPRDALVARDGLTLGELPSGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR+A L + + + RG ++TRL ++ + A++LA AG+ RL + V+
Sbjct: 119 TVGTGSPRRRAQLEALGLGLDIRELRGNVDTRLGRVTSGDLDAVVLAQAGLARLGRTSVV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+++ P+PGQGA+ +E ++ ++ V ++ DT V+ ERA L+EL+ C
Sbjct: 179 TEVIDPIQMLPAPGQGALAVEVRADDAATRDAVAALDDADTRACVDAERAVLSELEVGCS 238
Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A G L +V + DG S G+ DA IGR A+ +
Sbjct: 239 APVGALAEIVLGDDGDELSLRAVVASPDGTGDIRRSATGSPTDADGIGRRLARLL 293
>gi|290955334|ref|YP_003486516.1| porphobilinogen deaminase [Streptomyces scabiei 87.22]
gi|260644860|emb|CBG67946.1| porphobilinogen deaminase [Streptomyces scabiei 87.22]
Length = 296
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 140/282 (49%), Gaps = 6/282 (2%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT+E++ L++
Sbjct: 1 MALAQVERVRAELAVLH--PALRTEVVPVKTTGDKWMG-DLSQVEGKGAFTKEVDAALVA 57
Query: 75 GEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132
GE D AVH KD+P L G +A+L R+DIRD + ++L +L + IGTSS+
Sbjct: 58 GEADLAVHCVKDIPADRPLPAGTMFAAFLKRDDIRDALVDPAGRTLDELPAGTRIGTSSV 117
Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
RR A L + + FRG RL KL +A A+LLA +G++R+ + VI E L++E
Sbjct: 118 RRTAQLAASHPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRADVISEFLSVE 177
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P G G + ++ + + V + DT ER FL L G C S IAGFA
Sbjct: 178 TMMPPIGAGVLALQCREGDALTIDTVSGLGDPDTHRETLAERMFLHVLQGHCNSPIAGFA 237
Query: 253 YC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+G L V DGK R D +G A
Sbjct: 238 RTDRGGELSLRASVFTPDGKTVLNAHEWAGRLDPATLGTSVA 279
>gi|326391319|ref|ZP_08212859.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200]
gi|325992648|gb|EGD51100.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200]
Length = 299
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 137/252 (54%), Gaps = 5/252 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++GTR S LAL T + ++ K I+ ++T+GD + ++ ++EIGGK
Sbjct: 2 KKVIKVGTRSSELALKQ---TAMVINEIKKFRQDFEFEIVKITTQGDALIDKPVSEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL
Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + QE I T+ + ER L
Sbjct: 179 ENIITEYFPPDVVVPAPCQGILSVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAF 238
Query: 241 DGSCKSAIAGFA 252
+C+ +A
Sbjct: 239 GVNCRQPFGAYA 250
>gi|86151766|ref|ZP_01069980.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124067|ref|YP_004066071.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841395|gb|EAQ58643.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017789|gb|ADT65882.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 307
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E
Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I
Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K +
Sbjct: 122 GTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNF 181
Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGA+ IE+ +N+ K EL++ +N E+ + ER F+A L+G C+
Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLECLNDENALIETSIEREFIATLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I A G + ++ DG
Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265
>gi|78212229|ref|YP_381008.1| porphobilinogen deaminase [Synechococcus sp. CC9605]
gi|123729770|sp|Q3ALS9|HEM3_SYNSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78196688|gb|ABB34453.1| porphobilinogen deaminase [Synechococcus sp. CC9605]
Length = 317
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 151/293 (51%), Gaps = 7/293 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + + A
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNQAYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE P+ E +KV+ H T ERAFL
Sbjct: 179 RLGFSDRIHQLIPGEISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINI 288
EL+G C+ I +G L G+V + DGK I + S + +AI I
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQTSGEASEAEAIGI 291
>gi|88807654|ref|ZP_01123166.1| porphobilinogen deaminase [Synechococcus sp. WH 7805]
gi|88788868|gb|EAR20023.1| porphobilinogen deaminase [Synechococcus sp. WH 7805]
Length = 317
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 156/300 (52%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELESAH--PGMAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNADHT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL
Sbjct: 179 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + G L G+V + DG R G+ D IGR A ++
Sbjct: 239 RELEGGCQVPIGVNSRIDGQELILTGMVASLDGLRLIRDERRGSLTDPEAIGRALAADLK 298
>gi|167038985|ref|YP_001661970.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514]
gi|300913424|ref|ZP_07130741.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561]
gi|307723560|ref|YP_003903311.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513]
gi|166853225|gb|ABY91634.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514]
gi|300890109|gb|EFK85254.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561]
gi|307580621|gb|ADN54020.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513]
Length = 299
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 137/252 (54%), Gaps = 5/252 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++GTR S LAL T + ++ K I+ ++T+GD + ++ ++EIGGK
Sbjct: 2 KKVIKVGTRSSELALKQ---TAMVINEIKKFRQDFEFEIVKITTQGDALIDKPVSEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSGDGTQFMDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL
Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + QE I T+ + ER L
Sbjct: 179 ENIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAF 238
Query: 241 DGSCKSAIAGFA 252
+C+ +A
Sbjct: 239 GVNCRQPFGAYA 250
>gi|300703401|ref|YP_003745003.1| hydroxymethylbilane synthase [Ralstonia solanacearum CFBP2957]
gi|299071064|emb|CBJ42373.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum CFBP2957]
Length = 334
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 3/265 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E
Sbjct: 24 IASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 81
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G + A L RED RD F+S+ L L +V+
Sbjct: 82 LEVALAEGRADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGAVV 141
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL + I+
Sbjct: 142 GTSSLRREASLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERIRA 201
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ + P+ GQGA+ IET + Q + ++H T +V ERA L GSC+
Sbjct: 202 VIASDVSLPAAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQVP 261
Query: 248 IAGFA-YCKGSTLYFYGIVLASDGK 271
+A FA + L V + DG+
Sbjct: 262 LAAFAHWTDAGALRLRAFVASQDGR 286
>gi|318041172|ref|ZP_07973128.1| porphobilinogen deaminase [Synechococcus sp. CB0101]
Length = 317
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 151/300 (50%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H+ I I ++T+GD+I + L +IG
Sbjct: 1 MAASQLRIASRRSQLAMVQTHWVRDELAKAHE--GLEITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H K
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118
Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
LA SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDTAVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DG+ G++ D IG A +R
Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGQRLIRDEARGDQKDPEAIGIALAHALR 298
>gi|295094641|emb|CBK83732.1| porphobilinogen deaminase [Coprococcus sp. ART55/1]
Length = 350
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 149/274 (54%), Gaps = 20/274 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK
Sbjct: 38 QKKTVKVGTRSSKLALAQTELVIKALNE--RFPQVDFQMVTMSTRGDRDTSRALLEFGGK 95
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
+F EE E+ + G+ID AVHSAKDMP ++++GL IS LPR +D+ I + + + D
Sbjct: 96 AVFVEEFEEAIFKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDILIYKSGR-IFDR 154
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-- 179
V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL
Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYRNAECKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214
Query: 180 --------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
K+++ ++ E P+ QG I IET + + ++V+ IN +
Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYISTESMLPAACQGIIAIETRTSG-EVYDMVRAINDTE 273
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259
+ + CERA L+ L+ C I ++ G +
Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELHGDHM 307
>gi|198415361|ref|XP_002126885.1| PREDICTED: similar to hydroxymethylbilane synthase, b [Ciona
intestinalis]
Length = 359
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 149/269 (55%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA+ + L ++K + I+ ++T GD+I +++L++ G K LFT
Sbjct: 7 LRVGTRKSELAMVQTNWVVNQLKSLNK--SLEVEIVQMATIGDKILDKSLSKTGEKSLFT 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E LI+ ++D V+S KDMP+ L L ISA RED RD I H + L+DL
Sbjct: 65 KELEDALIANQVDLVVNSLKDMPSTLPPNLTISAVSRREDPRDAVIMHPDNVGKRLEDLP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S++GTSSLRR A L + D+ RG + TRL KL++ + AI+LA AG+KR+
Sbjct: 125 PGSIVGTSSLRRVAQLKKLFPDLKFKSIRGNLNTRLRKLDDASNFSAIILAVAGVKRMGW 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I L ++ + GQGA+ IET ++ K+ +LV ++ +DT ERAFL L
Sbjct: 185 NARISYTLTTDECLYAIGQGALGIETRADDMKSIKLVSQLHDKDTVIRTVAERAFLKTLG 244
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C A ++ LY G V DG
Sbjct: 245 GGCSVPQAVHSWIIEDELYMRGAVFNLDG 273
>gi|86604967|ref|YP_473730.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab]
gi|86553509|gb|ABC98467.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab]
Length = 310
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 155/295 (52%), Gaps = 5/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LALA + L H P + + LST+GD I + L +IG KGLFT
Sbjct: 1 MRIASRKSELALAQTYWVMGQLQAHH--PGLPLELHTLSTQGDIILDVALAKIGDKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122
+E+E L++G D AVHS KD+PT+L +GL + A RED D + L L
Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITQREDPLDALVLREELRGYQLATLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L + + RG + TRL KL+ + ++LA AG+KRL +E
Sbjct: 119 AGTVIGTSSLRRLAQLRHAFPHLQFKNVRGNLNTRLAKLDRGEYDGLILAVAGLKRLGQE 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G
Sbjct: 179 QRIHEVLDPSVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ I + +G L+ G+V +G+ ++ G+ D +G A+ ++
Sbjct: 239 GCQVPIGVHSQVQGEELHLTGMVADLEGRQLIRDTQTGSTADPEAVGMALAEKLK 293
>gi|327400408|ref|YP_004341247.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6]
gi|327315916|gb|AEA46532.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6]
Length = 296
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 148/264 (56%), Gaps = 11/264 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LALA + + L K + + I + T GD + +R L E G G F
Sbjct: 7 VGTRGSKLALAQTEKVIAHL----KAEGYEVEIRIIKTPGDIMKDRPLHEFKGMGAFVRV 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I++ L+ G+ID AVHS KD+P+K+ G+ I+A L RE D F++ ++ +L +SV+
Sbjct: 63 IDEALVDGDIDIAVHSYKDVPSKI-NGV-IAAVLERESPCDAFVTREGLTIDELESYSVV 120
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GTSSLRR+A + R+R D+ + + RG ++TRL KL + AILLA AG+ RL EKV
Sbjct: 121 GTSSLRRRAQIKRYRPDLKIENLRGNVDTRLRKLREKQYDAILLAEAGLIRLGLNEKVRY 180
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ LN E F PS QG I +ET ++LV +NH+ T ERA L EL C
Sbjct: 181 QSLNPEIFVPSANQGIIAVETRKGE---EDLVSFMNHKRTAVEAEVERAVLKELGVGCAV 237
Query: 247 AIAGFAYCKGSTLYFYGIVLASDG 270
+ +A G + Y VL+ DG
Sbjct: 238 PVGIYAKFDGK-IRLYCEVLSHDG 260
>gi|153952621|ref|YP_001398427.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei
269.97]
gi|166201501|sp|A7H4J7|HEM3_CAMJD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152940067|gb|ABS44808.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei
269.97]
Length = 307
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E
Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I
Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSTDAMLSQNYKDFLSLPKGAKI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK LL R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K +
Sbjct: 122 GTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQVNF 181
Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGA+ IE+ + + K EL+K +N E+ + ER F+A L+G C+
Sbjct: 182 VYEFSKDELIPAASQGALGIES-IKDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I A G + ++ DG
Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265
>gi|56685543|dbj|BAD78765.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 6301]
Length = 300
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 133/241 (55%), Gaps = 3/241 (1%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + +ST+GD I + L +IG KGLFT+E+E +++GE+D AVHS KD+PT+L +
Sbjct: 15 PDRQFDVQTMSTQGDIILDVALAKIGDKGLFTKELEVAMLAGEVDFAVHSLKDLPTRLPE 74
Query: 94 GLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150
GL + RED D + H L+ L +VIGTSSLRR A L + D
Sbjct: 75 GLILGCVTEREDPADALVVHDRFKDHQLETLPEGTVIGTSSLRRLAQLRHHYPHLQFKDV 134
Query: 151 RGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN 210
RG + TRL KL+ + A++LA AG++RL I +++ + GQGA+ IE
Sbjct: 135 RGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRIHQLIPAAVSLHAVGQGALGIECRAE 194
Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+P+ EL+K + HE T ERAFL EL+G C+ I TL G+V + DG
Sbjct: 195 DPEILELLKALEHEPTSQRCLAERAFLRELEGGCQVPIGVNTAIADGTLTLTGMVASLDG 254
Query: 271 K 271
+
Sbjct: 255 Q 255
>gi|332527780|ref|ZP_08403819.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2]
gi|332112176|gb|EGJ12152.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2]
Length = 309
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 138/252 (54%), Gaps = 3/252 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R L + + ++ ++TKGD+I +R L+++GGKGLF +E
Sbjct: 7 IATRESRLALWQAEHVRDVLTARFGL---AVELLGMTTKGDQILDRALSKVGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G AVHS KD+P L G ++A RED RD ++S+ ++L L + +
Sbjct: 64 LETALEEGRAHLAVHSLKDVPMDLPPGFALAAIWEREDPRDAWVSNQYENLDALPQGACV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 124 GTSSLRRVVQLLARRPDLKIEPLRGNLDTRLRKLDEGGYDAIVLAAAGLKRLGLGARIRS 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + P+ GQGA+ IE ++ + +EL+ H T+ + + ERA L GSC
Sbjct: 184 LFDTSVMIPAAGQGALGIEIREDDTRLKELLAQTLHLPTFLACHAERAVSRSLGGSCSMP 243
Query: 248 IAGFAYCKGSTL 259
+A F L
Sbjct: 244 LAAFGQWNDGVL 255
>gi|307332259|ref|ZP_07611338.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
gi|306882087|gb|EFN13194.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
Length = 319
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT
Sbjct: 15 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMG-DLSKLGGKGAFT 71
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L ++
Sbjct: 72 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDEMPA 131
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L ++ + RG RL KL + A++LA +G++R+ +
Sbjct: 132 GTRIGTSSVRRVAQLAITHPELECVPMRGNANRRLEKLEAGECDALMLAVSGLERIGRTD 191
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EIL ++ P G G + ++ ++ + E V + D W + ER L L G
Sbjct: 192 RISEILPVDTMCPPIGAGVLGLQCREDDTETIEAVAGLGDADVWKEITAERMLLHVLQGH 251
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 252 CNSPIAGYAKAERDGRLSLRARVFSPDGKRVLDAHEWAGPLDPATLGTSVAVALLRQGAR 311
Query: 303 NVFN 306
V +
Sbjct: 312 EVID 315
>gi|297156263|gb|ADI05975.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1]
Length = 315
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+ +GGKG FT
Sbjct: 11 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMG-DLSALGGKGAFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD + +L L
Sbjct: 68 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAYLKRDDIRDAVVHPGGLTLDQLPE 127
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL KL+ + A+LLA +G++R+ +
Sbjct: 128 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLDAGECDALLLAVSGLERIGRTD 187
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EIL +E P G G + ++ ++ + V + D W + ER L L G
Sbjct: 188 RISEILPVETMCPPIGAGVLALQCREDDTATIDAVSGLGDADAWKEITAERMLLHVLQGH 247
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 248 CNSPIAGYARAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 307
Query: 303 NVFN 306
V +
Sbjct: 308 EVID 311
>gi|332186913|ref|ZP_08388654.1| porphobilinogen deaminase [Sphingomonas sp. S17]
gi|332012923|gb|EGI54987.1| porphobilinogen deaminase [Sphingomonas sp. S17]
Length = 210
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FR+GTR SPLAL A R++L D I I+P+ T GDR+ +R L EIGGK L+T
Sbjct: 4 FRLGTRGSPLALTQAHMVRAALADAQGWDEDAIEIVPIKTTGDRVQDRALAEIGGKALWT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+ GEID +VHS KD+ T L I+A LPR D+RD I A+++ +L +
Sbjct: 64 KELDRALLDGEIDASVHSMKDVETIRPDWLHIAAMLPRADVRDRLIG--AETIAELRPGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR+A LL R D+++ RG ++TRL KL + + A LLA AG+ RL +E +
Sbjct: 122 VVGTSSPRRRAQLLSHRPDLTITLLRGNVDTRLAKLASGEMDATLLAAAGLDRLGRE--V 179
Query: 186 KEILNIEDFPPSP 198
+ + P+P
Sbjct: 180 GHAVPTDQMLPAP 192
>gi|302879710|ref|YP_003848274.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2]
gi|302582499|gb|ADL56510.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2]
Length = 317
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 152/264 (57%), Gaps = 2/264 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + +L++IGGKGLF +E
Sbjct: 17 IASRESALAMWQAEHIRDRLRALY--PQTDVSILGMTTQGDQILDVSLSKIGGKGLFVKE 74
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A RED D F+S+ ++L L SV+
Sbjct: 75 LETALEDGRADFAVHSLKDVPMVLPEGFVLAAIGEREDPHDAFVSNNYENLAALPAGSVV 134
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR++ L + + RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 135 GTSSLRRESQLRARFPHLVIEPLRGNVQTRLRKLDEGLYAAIILAAAGLKRLGLATRIRA 194
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+++ ED P+ GQGA+ IE + ++ ++H DT V ERA L+GSC+
Sbjct: 195 VISSEDSLPAVGQGALGIECRADRLDVIAALQPLHHPDTAACVFAERAMSRALNGSCQVP 254
Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271
+ GFA + L G V + DG+
Sbjct: 255 LGGFAEVQNGQLRMRGFVASPDGQ 278
>gi|157412912|ref|YP_001483778.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215]
gi|167008816|sp|A8G3L1|HEM3_PROM2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157387487|gb|ABV50192.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215]
Length = 318
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 5/269 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LA+ + L IP ++ I ++T+GD+I + L +IG KGLFT
Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--RNIPNLDVSIEAMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +++ G D AVHS KD+PT L GL++ RED D + + L+ L
Sbjct: 64 KELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVSKKNDYYKLETLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+KRL E
Sbjct: 124 EGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL EL+G
Sbjct: 184 SRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFLRELEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C+ I + LY G+V + DGK
Sbjct: 244 GCQVPIGVNSNIDNGQLYLTGMVASLDGK 272
>gi|20089471|ref|NP_615546.1| porphobilinogen deaminase [Methanosarcina acetivorans C2A]
gi|23821686|sp|Q8TT56|HEM3_METAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|19914376|gb|AAM04026.1| hydroxymethylbilane synthase [Methanosarcina acetivorans C2A]
Length = 317
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 150/267 (56%), Gaps = 9/267 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLFTE 66
IGTR S LALA E + L+ + +I II T GDR T+R L + GG G F
Sbjct: 3 IGTRGSQLALAQT-ENVARLLKERGVE-TSIKII--KTSGDRFTDRPLHAVSGGVGAFVR 58
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E++ +++GEID AVHS KDMPT +GL A L R+ D+ +++ +L +L ++
Sbjct: 59 ELDDVMLAGEIDIAVHSMKDMPTIRPEGLPTVAVLKRDTPFDILLTYDGTTLDELPEQAI 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSSLRR A + R+R D+ + RG I+TRL KL + ILLA AG++R+ E +
Sbjct: 119 IGTSSLRRTAQIRRYRPDLITQELRGNIDTRLRKLKEGQYDGILLAKAGLERMGWE-IDG 177
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
EIL+ + F PSP QG + + T +P+ + V ++H ++ ER ++EL G C +
Sbjct: 178 EILSPDFFCPSPNQGTVAVVTRA-DPEIEAAVSGLDHTESRIVTEIERILISELGGGCTT 236
Query: 247 AIAGFAYCKG--STLYFYGIVLASDGK 271
I +A ++ VL+ DGK
Sbjct: 237 PIGSYAELTSDKQEIHIRAEVLSLDGK 263
>gi|213583404|ref|ZP_03365230.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 206
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 118/202 (58%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERA 235
Q L+ +NH T V ERA
Sbjct: 185 TQALLAPLNHSQTALRVTAERA 206
>gi|32267226|ref|NP_861258.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449]
gi|39931411|sp|Q7VFE9|HEM3_HELHP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|32263279|gb|AAP78324.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449]
Length = 321
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 157/282 (55%), Gaps = 6/282 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A +S L + +I T+GD+I + L +IGGKGLFT+E
Sbjct: 13 IGSRGSILALWQAEYIKSCLKAQCGLQSRIQII---KTRGDKILDVPLAKIGGKGLFTKE 69
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+S +ID AVHS KD+P + + L ++A RE D F+S +L L + +
Sbjct: 70 LEEMLLSKDIDLAVHSLKDVPVEFVPELDLAAITQRESANDCFLSVNYPNLNALPQGAKV 129
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186
GT+SLRR + ++RSD+ + RG ++TRL KL+N AI+LA AG+ RLK + ++
Sbjct: 130 GTTSLRRSMQIKKYRSDLDTLSLRGNVQTRLEKLHNGAFDAIILAQAGVNRLKINTQDVR 189
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
I+ ++ P+ GQGA+ IE + + + V+N + + V+ ERAF+ L+G C+
Sbjct: 190 YIVPLDFMIPAMGQGALGIEMR-KDSIFFDRIAVLNDKQSALCVSAERAFVRTLEGGCQV 248
Query: 247 AIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAIN 287
I +A + L IV DG ++ + + D IN
Sbjct: 249 PIGVYAQFSNNKLTLQAIVGLPDGSEVLQDSVEDSINIDDIN 290
>gi|126695860|ref|YP_001090746.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301]
gi|158513419|sp|A3PBM0|HEM3_PROM0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|126542903|gb|ABO17145.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301]
Length = 316
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 156/295 (52%), Gaps = 5/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LA+ + L IP + I ++T+GD+I + L +IG KGLFT
Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--RNIPNLEVSIEAMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +++ G D AVHS KD+PT L GL++ RED D + + L+ L
Sbjct: 64 KELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLETLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+KRL E
Sbjct: 124 EGSIVGTSSLRRLAQLRNKYPHLIFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL EL+G
Sbjct: 184 SRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINILEDKPTSQRCLAERAFLRELEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ I + + L G+V + DG+ + GN D IG++ A+ ++
Sbjct: 244 GCQVPIGVNSNIQNEKLCLTGMVASLDGERLIKDQHIGNINDPEEIGKELAKKLK 298
>gi|124022436|ref|YP_001016743.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303]
gi|158512753|sp|A2C7L8|HEM3_PROM3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123962722|gb|ABM77478.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303]
Length = 317
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 158/297 (53%), Gaps = 9/297 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG KGLFT
Sbjct: 6 LRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +++ G D AVHS KD+PT L +GL + RED D + + L L
Sbjct: 64 KELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQLDTLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ RL
Sbjct: 124 EGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLTRLGFG 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +++ E + GQGA+ IE +P+ E++K + H+ T ERA L EL+G
Sbjct: 184 DRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEVIKALEHKPTAQRCLAERALLRELEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIR 297
C+ I + + + L G+V + DGK + G +RC+A IG++ A+ ++
Sbjct: 244 GCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEA--IGKELAETLK 298
>gi|329848284|ref|ZP_08263312.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19]
gi|328843347|gb|EGF92916.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19]
Length = 311
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 153/273 (56%), Gaps = 13/273 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLM-----DVHK---IPPHNIVIIPLSTKGDRITNRTLTE 57
+IGTR S LAL + ++ DV + + P ++ +T+GDRI +R L E
Sbjct: 4 LKIGTRGSKLALTQCGWVQRRIVAALGEDVARADEVAPLTVI----TTQGDRIQDRRLIE 59
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
GGK LFT+EIE L+ G+ID AVHS KDMP + GL + A RED RD F+S ++
Sbjct: 60 AGGKALFTKEIEDALLRGDIDVAVHSLKDMPAADVPGLSLCAIPVREDPRDAFLSPNYET 119
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L DL + +GT+S+RR+A L R D+ VI RG ++TRL KL A+LLA AG+
Sbjct: 120 LADLPQGARLGTASMRRQAQALAQRPDLQVIMTRGNVDTRLAKLQAGACDALLLAAAGLN 179
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I+ ++ + F +PGQGA+ I+ + A + KV + T+ + ER L
Sbjct: 180 RLGLSHHIRSHIDPDLFASAPGQGALAIQCRTEDLGAGWMAKV-HDVTTFLRIQAERGAL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+ SC++A+ +A + L + L++DG
Sbjct: 239 EALEASCRTAVGAYATLENDQLALFVEALSADG 271
>gi|302541659|ref|ZP_07294001.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC
53653]
gi|302459277|gb|EFL22370.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC
53653]
Length = 311
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT
Sbjct: 7 IRIVSRSSPMALAQVERVRTELAALR--PGIRTEVVPVTTSGDRWMG-DLSKLGGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L +
Sbjct: 64 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDQMPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL K+ A++LA +G++R+ +
Sbjct: 124 GTRIGTSSVRRVAQLAVTHPHVECVPMRGNANRRLEKMAAGDCDALMLAVSGLERIDRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI EIL +E P G G + ++ ++ E V + + W + ER L L G
Sbjct: 184 VISEILPVETMCPPIGAGVLGLQCREDDTTTIEAVAGLGDTEVWKEITAERMLLHVLQGH 243
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 244 CNSPIAGYAKAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
V +
Sbjct: 304 EVID 307
>gi|284034243|ref|YP_003384174.1| porphobilinogen deaminase [Kribbella flavida DSM 17836]
gi|283813536|gb|ADB35375.1| porphobilinogen deaminase [Kribbella flavida DSM 17836]
Length = 294
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 147/289 (50%), Gaps = 10/289 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR S LA A A +L ++ H + ++P+ T GD + L +IGG G+F
Sbjct: 2 IKLGTRRSALATAQAALVADALRNLG----HEVDLVPIVTTGD-VNRAPLEQIGGTGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++GEID AVHS KD+PT + GL + A RED RDV ++ +L +L +
Sbjct: 57 SALRDALLAGEIDIAVHSLKDLPTAPVDGLTLGAIPVREDPRDVLVARDGLTLGELQTGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR A L + + RG ++TR+ + + K A++LA AG+ RL + I
Sbjct: 117 LVGTGSPRRVAQLEALGLGLELTGIRGNVDTRIAMVADGKVDAVVLARAGLARLGRLAEI 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+PGQGA+ IE ++ + ++ T +V ER LA L+ C
Sbjct: 177 TETLDPIQMLPAPGQGALGIECRSDDTAVLAALAPLDDPGTRAAVTAERQLLATLEAGCT 236
Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+ + A G L+ G L DG +S NG+ D +GR
Sbjct: 237 APVGALAEVVDGEDGPELWLRG-ALGEDGGGVRRLSANGSVDDPAAVGR 284
>gi|123210215|emb|CAM15095.1| hydroxymethylbilane synthase [Danio rerio]
Length = 358
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K LFT
Sbjct: 19 IRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L L
Sbjct: 77 KELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDSLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI-KRLKK 181
SVIGTSSLRR A L + + + RG + TRL KL+ +A ++ A KR+
Sbjct: 137 EKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRMGW 196
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL +L+
Sbjct: 197 ESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQLE 256
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A KGS LY G V + DG
Sbjct: 257 GGCSVPVAVHTEVKGSMLYLTGAVYSLDG 285
>gi|219848200|ref|YP_002462633.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485]
gi|219542459|gb|ACL24197.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485]
Length = 324
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 14/260 (5%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T GDR+ + L+ +G KGLF +E+E+ L++G++D VHSAKDMPT GL +SA+
Sbjct: 39 ITTTGDRVLDVALSAVGDKGLFVKELEQALLAGDVDLCVHSAKDMPTATPPGLMLSAFPV 98
Query: 103 REDIRDVFISHTAQSLKDLAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
RED RDV + A DLA + IGTSSLRR + L R D+ + D RG ++TRL
Sbjct: 99 REDPRDVLVVRHADVGTDLATLPTGARIGTSSLRRASQLRYHRPDLHLNDVRGNVDTRLR 158
Query: 160 KLNNNKAHAILLAYAGIKRL---------KKEKVIKEILNIEDFPPSPGQGAICIETHVN 210
KL +++ A++LA AG++RL + L+ P+ QG + +ET +
Sbjct: 159 KLASDQYDALILAAAGLRRLGLWDGTPGASIGAALVYPLDPSVMLPAVAQGILAVETRTD 218
Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+ LV ++ + ERAFL L+G C+ +A A + L+F G+V A DG
Sbjct: 219 DETTNRLVAALDDSAARTAALAERAFLRRLEGGCQIPVAAHAVLTEAGLHFRGMVGALDG 278
Query: 271 K--IFHEVSRNGNRCDAINI 288
+F E + + +A+ I
Sbjct: 279 STLVFAEQVGDPAQPEAVGI 298
>gi|41056087|ref|NP_957448.1| hydroxymethylbilane synthase a [Danio rerio]
gi|31419559|gb|AAH53268.1| Hydroxymethylbilane synthase a [Danio rerio]
Length = 358
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA +L ++ P + I+ +ST GD+I + L++IG K LFT
Sbjct: 19 IRMGTRKSQLARIQTDSVAGTLKQLY--PDVRLEIVAMSTIGDKILDTALSKIGEKSLFT 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L L
Sbjct: 77 KELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDSLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI-KRLKK 181
SVIGTSSLRR A L + + + RG + TRL KL+ +A ++ A KR+
Sbjct: 137 EKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRMGW 196
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL +L+
Sbjct: 197 ESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQLE 256
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A KGS LY G V + DG
Sbjct: 257 GGCSVPVAVHTEVKGSMLYLTGAVYSLDG 285
>gi|291542328|emb|CBL15438.1| porphobilinogen deaminase [Ruminococcus bromii L2-63]
Length = 286
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 140/250 (56%), Gaps = 9/250 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA +L ++ P I + +ST GD+ ++ LT +GGKG+F
Sbjct: 3 IKIGTRKSRLALAQTEMLIKTLK--NRFPNVKIETVYISTTGDKTLDKPLTALGGKGVFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+SGE D AVHSAKD+PTK+ GL+ISA LPR DVF++ KD
Sbjct: 61 KELEMSLLSGETDVAVHSAKDLPTKIADGLEISAVLPRGSYGDVFVTRNNFETKD---GF 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---KKE 182
VIGT SLRRK + + D RG ++TRL KL N + A++LA AG++RL E
Sbjct: 118 VIGTGSLRRKLFAEKIYPNAKFKDIRGNVDTRLKKLLNGEYDALVLAKAGLERLDLCNGE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++F P+P QG + IE+ N + +++ I+ ++T S ER L L+
Sbjct: 178 DYTVTPFDADEFLPAPCQGIVAIESR-KNSEVSKMLAEISDKNTMLSFETERQVLHSLNA 236
Query: 243 SCKSAIAGFA 252
C + + +
Sbjct: 237 DCSTPVGAIS 246
>gi|311744366|ref|ZP_07718168.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272]
gi|311312332|gb|EFQ82247.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272]
Length = 311
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 9/296 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + + +V + ++ +ST+GDR T L E+GG+G+F
Sbjct: 8 LRLGTRASVLARTQSGHVADRITEVSG---RAVELVTISTEGDRSTG-PLAEMGGQGVFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +G +D AVHS KD+PT L ++A PRED+RDV ++ +L +L +
Sbjct: 64 AALREAVAAGHVDLAVHSLKDLPTAPDPRLALAAVPPREDVRDVVVARDGLTLGELPQGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT S RR+A + + ++ RG ++TR+ K+ + + A++LA AG+ RL +
Sbjct: 124 RIGTGSPRREAQINALGLGVEIVPIRGNVDTRIGKVASGEVDAVVLARAGLLRLGRADEA 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ P+PGQGA+ +E + + L+ ++ DT +V ER+ LA L+ C
Sbjct: 184 TEVLDPIQVLPAPGQGALAVECRAGDDELIGLLAALDDADTRAAVTAERSLLAALEAGCS 243
Query: 246 SAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG-RDAAQYI 296
+ + A G L+ +V G +S G +A +G R AA+ +
Sbjct: 244 APVGALAEVAWGDDGDELWIRAVVADPSGSPTIRLSATGLPAEAAAVGERLAAEML 299
>gi|73668987|ref|YP_305002.1| porphobilinogen deaminase [Methanosarcina barkeri str. Fusaro]
gi|121731279|sp|Q46CH0|HEM3_METBF RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|72396149|gb|AAZ70422.1| hydroxymethylbilane synthase [Methanosarcina barkeri str. Fusaro]
Length = 316
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-GKGLFTE 66
IGTR S LALA A ET + L+ + +I T GDR T+R L + G G F
Sbjct: 3 IGTRGSQLALAQA-ETVARLLKAKGVETSLKII---KTSGDRFTDRPLHAVSSGVGAFVR 58
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+++ ++ G+ID AVHS KDMPT L A L R+ D+ +++ L +L+ S+
Sbjct: 59 ELDEVMLEGKIDIAVHSMKDMPTIRPPTLPTVAVLKRDTPFDLLLTYDGTPLDELSEQSI 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSSLRR A + R+R D+ D RG I+TRL KL K ILLA AG++R+ E +
Sbjct: 119 IGTSSLRRAAQIKRYRPDLVTQDLRGNIDTRLRKLKEGKYDGILLAKAGLERMGWE-LEG 177
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
EIL+ + F PSP QG I + T +A+ V ++H D+ + ER ++EL G C +
Sbjct: 178 EILSPDFFCPSPNQGTIAVVTRAET-EAEAAVSRLDHTDSRIATEIERILISELGGGCTT 236
Query: 247 AIAGFAYCKGS--TLYFYGIVLASDGK 271
I +A L+ VL+ DG+
Sbjct: 237 PIGSYAEIMPDRKKLHVRAEVLSLDGE 263
>gi|33863541|ref|NP_895101.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313]
gi|39931399|sp|Q7V697|HEM3_PROMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33640990|emb|CAE21448.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313]
Length = 317
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 157/297 (52%), Gaps = 9/297 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG KGLFT
Sbjct: 6 LRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +++ G D AVHS KD+PT L +GL + RED D + + L L
Sbjct: 64 KELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQLDTLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ RL
Sbjct: 124 EGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLTRLGFG 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +++ E + GQGA+ IE +P+ E +K + H+ T ERA L EL+G
Sbjct: 184 DRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEAIKALEHKPTAQRCLAERALLRELEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIR 297
C+ I + + + L G+V + DGK + G +RC+A IG++ A+ ++
Sbjct: 244 GCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEA--IGKELAETLK 298
>gi|184200499|ref|YP_001854706.1| porphobilinogen deaminase [Kocuria rhizophila DC2201]
gi|183580729|dbj|BAG29200.1| porphobilinogen deaminase [Kocuria rhizophila DC2201]
Length = 314
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 14/307 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M F +GTR S LA+ + ++ I H +V + T+GD +T L+++GG
Sbjct: 1 MSGAVFTVGTRGSQLAMTQSRWAAEAVSRAGGID-HELVTV--RTEGDVLTG-PLSQMGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + +++ G +D AVHS KD+PT ++GL+I A RED RD + +L +
Sbjct: 57 TGVFATALRSQVLDGRVDLAVHSLKDLPTAPVEGLRIVALPEREDPRDALCARDGLTLAE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---NNNKAHAILLAYAGIK 177
L + +GT S RR A L R D+ ++D RG + TRLN++ + A++LA +G+K
Sbjct: 117 LPEGAAVGTGSPRRVAQLRALRPDLRIVDIRGNVGTRLNRVAPADPGDLDAVVLAASGLK 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK---VINHEDTWDSVNCER 234
RL E I E L+ P+PGQGA+ +E + L++ ++H T +V ER
Sbjct: 177 RLGLEGRITEYLDPHVMLPAPGQGALALEVSARLDPSGALMRGLEAVDHLPTRLAVTAER 236
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
A LA+L+ C + + FA G L +V DG EV R A ++ +A
Sbjct: 237 AVLAQLEAGCAAPVGTFARVAGDVLELDVVVANPDGS---EVMRRSESVPAPSV-EEAEA 292
Query: 295 YIRFISN 301
+ R I++
Sbjct: 293 FGRRIAD 299
>gi|315453028|ref|YP_004073298.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179]
gi|315132080|emb|CBY82708.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179]
Length = 305
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 145/266 (54%), Gaps = 5/266 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L + IV TKGD+I + L +IGGKGLFT+E
Sbjct: 7 IGSRGSALALWQARHVQELLKPLGLESEIKIV----KTKGDKILDVPLAKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L+ G+ID AVHS KD+P L +GL ++ R + +D F+S+ +L+ L ++ I
Sbjct: 63 LEVLLLGGKIDLAVHSLKDVPVDLQEGLVLACVSARANPQDCFLSYKYPNLQALPPNARI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR L R+D + RG ++ RL +L AI+LA AG++RL E +
Sbjct: 123 GTTSLRRAMQLKALRTDTDPLSLRGNVQRRLERLQRGDFEAIILACAGVERLGLELPYRV 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L++E+ PS GQGA+ IE N+P ++ +N ++ ER F+ L G C+
Sbjct: 183 PLSLEEMIPSMGQGALGIEMRANHPLLDQITS-LNDPNSALCCGLERDFVRALGGGCQVP 241
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIF 273
+ A +G + IV DGK F
Sbjct: 242 LGVHARLQGEHIEMRAIVGLVDGKTF 267
>gi|123968087|ref|YP_001008945.1| porphobilinogen deaminase [Prochlorococcus marinus str. AS9601]
gi|158513952|sp|A2BPX7|HEM3_PROMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123198197|gb|ABM69838.1| Porphobilinogen deaminase [Prochlorococcus marinus str. AS9601]
Length = 316
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 5/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LA+ + L IP + I ++T+GD+I + L +IG KGLFT
Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--KNIPNLEVSIEAMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +++ G D AVHS KD+PT L GL++ RED D + + L++L
Sbjct: 64 KELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLENLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+KRL E
Sbjct: 124 EGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL EL+G
Sbjct: 184 SRIHQIIPSEVSLHAVGQGALGIECKSDDKKVLEIISILEDKPTCQRCLAERAFLRELEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C+ I + + L G+V + DG+ + G+ D +G++ A+ ++
Sbjct: 244 GCQVPIGVNSKIQNEQLCLTGMVASLDGERLIKDQYIGDINDPEEVGKELAKKLK 298
>gi|146298706|ref|YP_001193297.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101]
gi|146153124|gb|ABQ03978.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101]
Length = 307
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 159/300 (53%), Gaps = 15/300 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RIGTR S LAL A L D+ + I+ + ++GD I ++ L E+G
Sbjct: 1 MAEKTIRIGTRDSELALWQAHNVEKKLNDLG----YKTSIVAVKSQGDIILDKPLYELGI 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +I+G+ID AVHS KD+PT L KG+ A LPR ++ D+ + H D
Sbjct: 57 TGIFTKTLDIAMINGDIDIAVHSMKDVPTALPKGIVQGAVLPRANVLDILV-HKGNP--D 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR-- 178
S I T SLRR+A + +V+D RG + TR+ KL +N + A AG++R
Sbjct: 114 FTNPSTIATGSLRRQAQWFNKYPNHTVVDLRGNVNTRMQKLQDNNWDGAVFAAAGLERIN 173
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
LK E I N++ P+P QGA+ + N+ + + +N +T + ER FL
Sbjct: 174 LKPENYI----NLDWMIPAPAQGAMLVVGMENDNYTLDALSQLNDIETEICTHIERQFLR 229
Query: 239 ELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L+G C + I TL+F G++L+ DGK E+++ + + +G ++AQ I
Sbjct: 230 TLEGGCTAPIGALVTYNEDEDTLHFQGVLLSIDGKQKLEINKTVDISEWKKLGFNSAQEI 289
>gi|148241995|ref|YP_001227152.1| porphobilinogen deaminase [Synechococcus sp. RCC307]
gi|158513324|sp|A5GSE0|HEM3_SYNR3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|147850305|emb|CAK27799.1| Porphobilinogen deaminase [Synechococcus sp. RCC307]
Length = 317
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 152/302 (50%), Gaps = 9/302 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L + H P I I ++T+GD+I + L +IG
Sbjct: 1 MTASSLRIASRRSQLAMVQTEWVRDELANAH--PGLEISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H KD
Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVMHAKN--KD 116
Query: 121 LALHS-----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L L + V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG
Sbjct: 117 LTLATLPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVITRLEKLDSGQFDCLILAAAG 176
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL I E+++ + GQGA+ IE + E +KV+ H T ERA
Sbjct: 177 LGRLGLGDRIHELIDPSISLHAVGQGALGIECRDGDAAVLEQIKVLEHRPTSLRCLAERA 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
FL L+G C+ I +G L G+V + DGK + A ++G A+
Sbjct: 237 FLRTLEGGCQVPIGVNTRFEGDELVLTGMVASLDGKQLIRDELRAPQDQAEDLGNRLAEL 296
Query: 296 IR 297
+R
Sbjct: 297 LR 298
>gi|126326558|ref|XP_001370512.1| PREDICTED: similar to Porphobilinogen deaminase
(Hydroxymethylbilane synthase) (HMBS)
(Pre-uroporphyrinogen synthase) (PBG-D) [Monodelphis
domestica]
Length = 344
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L D++ P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVAMLKDIY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L I A RE D I H T Q+L L
Sbjct: 62 KELEYALEKNEVDLVVHSLKDLPTVLPPAFTIGAVCKRESPYDAVIFHPKYTGQTLGTLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SVIGTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 ERSVIGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILAAAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + ++L E+ + GQGA+ +E + + +LV+V++ +T ERAFL L+
Sbjct: 182 QSRVGQLLYPEECLYAVGQGALGVEVRAKDQEVLDLVQVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVDTTLKDGQLYLTGGVWSLDG 270
>gi|222823771|ref|YP_002575345.1| porphobilinogen deaminase [Campylobacter lari RM2100]
gi|254800239|sp|B9KGA9|HEM3_CAMLR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222538993|gb|ACM64094.1| porphobilinogen deaminase [Campylobacter lari RM2100]
Length = 308
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 145/244 (59%), Gaps = 5/244 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + ++ L H I + TKGD + + L +IGGKGLFT+E
Sbjct: 5 IATRKSQLALWQSEYIKNKLSQTH--SDLEISLEGFKTKGDVLLDSPLAKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ G+ AVHS KD+P+ KGL ++A RE++ D F+S +SL L + +
Sbjct: 63 LEESMLRGDSHLAVHSLKDVPSFFPKGLVLAAISKREEVNDAFLSEYYESLNALPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+ LL R D+++I RG I +RL KL + AI+LA+AGIKRL EK IK
Sbjct: 123 GTTSLRRRMQLLALRPDLNIISLRGNINSRLEKLKAKEFDAIILAFAGIKRLGLEKQIKF 182
Query: 188 I--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +++ P+ QGA+ IE+ +++ + + ++ +N ++ + + ER F+ L+G C+
Sbjct: 183 VKKFELDEMIPAASQGALGIES-IDDKQILKYLECLNDKNAFVETHIERDFIKTLEGGCQ 241
Query: 246 SAIA 249
I
Sbjct: 242 VPIG 245
>gi|148259148|ref|YP_001233275.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5]
gi|146400829|gb|ABQ29356.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5]
Length = 333
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 157/312 (50%), Gaps = 11/312 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK---IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P R+GTR SPLAL ++L ++ P +ST GDR+T+R L EIGGK
Sbjct: 20 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 79
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114
GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I +
Sbjct: 80 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 139
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A
Sbjct: 140 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 199
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER
Sbjct: 200 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 259
Query: 235 AFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
A LA LDGSC++ I G A L+ G+ DG + S N DA+ +G +
Sbjct: 260 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAVRLGAELG 319
Query: 294 QYIRFISNKNVF 305
+R S ++F
Sbjct: 320 ASLRRDSPADIF 331
>gi|284992946|ref|YP_003411500.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160]
gi|284066191|gb|ADB77129.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160]
Length = 312
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 151/295 (51%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + ++ +P + ++ +ST+GDR ++ + ++GG G+F
Sbjct: 9 LRLGTRASQLATTQSQAVADAITAASGVP---VELVHISTEGDR-SSVAIAQLGGTGVFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I + L+ G +D AVHS KD+PT GL I+A PRED RD ++ +L +L +
Sbjct: 65 TAIRQALLEGTVDVAVHSYKDLPTLPEPGLTIAAVPPREDPRDALVARDGLTLGELPAGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L + V+ RG ++TR+ ++ A++LA AG+ RL + +
Sbjct: 125 RVGTGAPRRVAQLRALGLGLEVVPIRGNVDTRMARVVPGDLDAVVLARAGLSRLGRLSAV 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGA+ +E N+ + ++L+ ++ T V ER LA L+ C
Sbjct: 185 TETLDPLQVLPAPAQGALAVECRGNDERTRQLLAALDDAATRACVVAERTTLAALEAGCS 244
Query: 246 SAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A +A G L+ V A DG S G +A +GR+ A +
Sbjct: 245 APVAAYAEVAEGEDGPELFLRASVTALDGSDGVRGSITGPPPEAERLGRELAAEL 299
>gi|237751827|ref|ZP_04582307.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879]
gi|229373193|gb|EEO23584.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879]
Length = 328
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 145/260 (55%), Gaps = 17/260 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+++KP +GTR S LAL A + L + +V+ + TKGD+I + L +IGG
Sbjct: 10 VQEKPLVLGTRGSLLALWQANHIKEKLESLG----FQVVLKTIKTKGDKILDAPLAKIGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +L+SG ID AVHS KD+P + L + + RED RD F+S +
Sbjct: 66 KGLFTKELENELLSGGIDFAVHSLKDVPIAIPPELMLVSITQREDARDCFVSEKYADIAS 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R R D+ RG ++TRL KL + AI+LA AG+ RL
Sbjct: 126 LPQGAKVGTTSLRRSMQLKRIRQDLDTQSLRGNVQTRLEKLRKGEFDAIILASAGLNRLD 185
Query: 181 KEKVIKEI--LNIEDFPPSPGQGAICIETHVNNPKA------QELVKVINH-EDTWDSVN 231
+ I I L I F P+ GQG++ IE +PK Q ++KV+ D+ ++
Sbjct: 186 LKDDIGFISHLQINQFIPAMGQGSLGIECR--DPKYSPDFRDQAIMKVLESLHDSKSALC 243
Query: 232 C--ERAFLAELDGSCKSAIA 249
C ERAF+ L G C+S I
Sbjct: 244 CNIERAFIQLLGGGCQSPIG 263
>gi|223939088|ref|ZP_03630972.1| porphobilinogen deaminase [bacterium Ellin514]
gi|223892248|gb|EEF58725.1| porphobilinogen deaminase [bacterium Ellin514]
Length = 332
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 38/294 (12%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---G 60
KP I TR S LALA A S P +I + + T GD++ +L + G
Sbjct: 7 KPIFIATRGSALALAQANAVLSQCRSA--FPKLDIELKIIKTTGDKLQKASLAKEGESLP 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---- 116
KGLFT+E+E L++G+ D AVHS KD+PT+L GL + A R D+RDV + A+
Sbjct: 65 KGLFTKELEVALLNGDADIAVHSLKDLPTELPTGLILGAVSKRADVRDVLVYRDAEYLRS 124
Query: 117 --------------SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
++KD + + TSS RRKA LL R D++V++ RG + TRL KL
Sbjct: 125 QPGKSNRRGFTPKLAIKDFPPGATVATSSTRRKAQLLAQRGDLNVVEIRGNVATRLEKLA 184
Query: 163 NN-KAHAILLAYAGIKRLK--------------KEKVIKEILNIEDFPPSPGQGAICIET 207
N + A +LA AG++RL E ++ IL+ + P GQ A+ +E
Sbjct: 185 NQPELDATVLAAAGLERLNFKITAEGKLAGEGIPEGLLATILDFDVMLPCVGQAALGMEI 244
Query: 208 HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF 261
N+ + QE+ +NH +T V ER+FL+ + G C+S +A +A G L
Sbjct: 245 RENDARIQEICDRLNHPETHACVLAERSFLSGMGGGCQSPVAAYAEIAGDQLQM 298
>gi|87123876|ref|ZP_01079726.1| Porphobilinogen deaminase [Synechococcus sp. RS9917]
gi|86168445|gb|EAQ69702.1| Porphobilinogen deaminase [Synechococcus sp. RS9917]
Length = 317
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 149/293 (50%), Gaps = 5/293 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEQAH--PGLPISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNADHK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L +V+GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LETLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDAGDYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE P EL+KV+ H T ERAFL
Sbjct: 179 RLGFADRIHQIIPSHISLHAVGQGALGIECVEGQPDVLELIKVLEHSPTASRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
EL+G C+ I + + L G+V + DGK R G A IG+
Sbjct: 239 RELEGGCQVPIGVNTRIEANELVLTGMVASLDGKRLIRDERRGTVDKAEAIGQ 291
>gi|225389494|ref|ZP_03759218.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme
DSM 15981]
gi|225044437|gb|EEG54683.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme
DSM 15981]
Length = 301
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 15/300 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ +SL + P + + T GD+I N+ L E GGKG+F
Sbjct: 5 IRIGTRNSRLAMIQTEMVAASLREAA--PGIQVSLEARMTTGDKILNKPLQEFGGKGVFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E E+ ++ G +D AVHSAKDMP +L +GL I RED RDV ++ + +
Sbjct: 63 SEFEEGILEGRLDLAVHSAKDMPMELAEGLSIVGVPMREDPRDVLVTAAGRPVPKTG-EI 121
Query: 126 VIGTSSLRRKALL------LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR- 178
VIGTSS RRK + L + + RG ++TRL KL + H I+LA AG+KR
Sbjct: 122 VIGTSSPRRKLQIELLGTNLWPGGSVRCENLRGNVQTRLGKLESGMYHGIILAAAGLKRL 181
Query: 179 --LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
L+ + + L E F P+ GQG + +E +A ++ I+H +TW +N ER
Sbjct: 182 GLLEDPRYNFQFLECESFVPAGGQGILAVEGRAEG-RAAGILSGISHRETWLCLNLERQV 240
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L LD C I ++ + L +GI +G+++ ++ G +A + R AA+ +
Sbjct: 241 LKLLDAGCHEPIGVYSRLEDGLLEVFGIS-GRNGRVY-KIHLKGQPEEAGELARRAAEGL 298
>gi|21225618|ref|NP_631397.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289767234|ref|ZP_06526612.1| porphobilinogen deaminase [Streptomyces lividans TK24]
gi|11386841|sp|Q9KY00|HEM32_STRCO RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName:
Full=Hydroxymethylbilane synthase 2; Short=HMBS 2;
AltName: Full=Pre-uroporphyrinogen synthase 2
gi|8246838|emb|CAB92889.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289697433|gb|EFD64862.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 313
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 9 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLG-DLSQVEGKGAFT 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L
Sbjct: 66 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +
Sbjct: 126 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + T ER FL L G
Sbjct: 186 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 245
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG A + L V DGK+ R D +G A
Sbjct: 246 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVA 296
>gi|33239945|ref|NP_874887.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|39931408|sp|Q7VD89|HEM3_PROMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33237471|gb|AAP99539.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 315
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 157/300 (52%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ + L P +I I ++T+GD+I + L +IG
Sbjct: 1 MALDQVRIASRRSQLAMVQTNWVKEELEKA--CPSIDISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITKREDPADALVVNKKYKNYQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L DL SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LNDLPEGSVVGTSSLRRLAQLRHHYPGLIFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE + + +++KV+ H+++ ERAFL
Sbjct: 179 RLGFGNRIHQLIPSEISLHAVGQGALGIECVKDKEEILQIIKVLEHKESSLRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + +G L G+V + DGK ++ G+ IG + A ++
Sbjct: 239 KELEGGCQVPIGVNSKIQGQELILTGMVASLDGKQLIRDTKTGSSMHPETIGIELANTLK 298
>gi|221134062|ref|ZP_03560367.1| porphobilinogen deaminase [Glaciecola sp. HTCC2999]
Length = 328
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 142/247 (57%), Gaps = 5/247 (2%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P ++ ++P+STKGDRI + L ++GGKGLF +E+E + G D AVHS KD+P + +
Sbjct: 16 PDMSVNLVPMSTKGDRILDTPLAKVGGKGLFIKELEVAMQEGRADIAVHSMKDVPVEFPE 75
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
G + A PRE+ D F+S+T + L +V+GTSSLRR+A L R D+++ D RG
Sbjct: 76 GFGLHAICPRENPFDAFVSNTYDDIDSLPKGAVVGTSSLRRQAQLRARRPDLTIKDLRGN 135
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL KL+ + AI+LA AG+ RLK I+ ++ P+ GQGA+ IE +N
Sbjct: 136 VNTRLAKLDAGEYDAIILACAGLIRLKMHDRIRSEIDPLTSLPAVGQGAVGIECRDDNLA 195
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLAS 268
++++ + +T V ERA A+L G C+ I FA + S LY G+V
Sbjct: 196 LIDVLQCLACPETTIRVMAERAMNAKLQGGCQVPIGSFATLETSQDGYRELYLKGLVATV 255
Query: 269 DGKIFHE 275
DG + E
Sbjct: 256 DGSVLLE 262
>gi|325286453|ref|YP_004262243.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489]
gi|324321907|gb|ADY29372.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489]
Length = 525
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 8/294 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A +S L + I+ + + GD ++ L E+G G+
Sbjct: 3 KIIRIGTRDSELALYQANRVKSELETLG----FKTKIVAVKSAGDLELDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT ++ ++ GEID AVHS KD+PT L KG+ +A L R +++D + + A
Sbjct: 59 FTRTLDIAMLKGEIDIAVHSLKDVPTVLPKGIVQAAVLERGNVKDTLVYKNNEEFLG-AR 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKKE 182
VI TSSLRRKA L V D RG + TRL KL +++ + + A AGI RL
Sbjct: 118 DGVIATSSLRRKAQWLNRYPTHKVEDIRGNVNTRLQKLEDSETWNGAIFAAAGIGRLNLR 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+E +N++ P+PGQGAI + + + + + INH +T ER FL L+G
Sbjct: 178 P--EEAVNLDWMIPAPGQGAIMVTAKEDEEEILAICEEINHRETEICTTIERTFLNRLEG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + I AY K + F ++L+ DG EV R D N+ +AA+++
Sbjct: 236 GCTAPIGALAYIKSEQVIFRAVLLSPDGTKKIEVDRLVKLGDHNNLAIEAAEHV 289
>gi|124025263|ref|YP_001014379.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A]
gi|158512743|sp|A2C0V4|HEM3_PROM1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123960331|gb|ABM75114.1| Porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A]
Length = 315
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 153/300 (51%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQRAH--PDLAITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPEGLILGCITEREDPSDALVVNEKNQIHK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE K +++K + HE T ER+FL
Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK + G+ A IG D A ++
Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298
>gi|241663752|ref|YP_002982112.1| porphobilinogen deaminase [Ralstonia pickettii 12D]
gi|240865779|gb|ACS63440.1| porphobilinogen deaminase [Ralstonia pickettii 12D]
Length = 338
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 150/264 (56%), Gaps = 3/264 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E
Sbjct: 28 IASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 85
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L +G +S L RED RD F+S+ L L +V+
Sbjct: 86 LEVALAEGRADLAVHSLKDVPMQLPEGFALSTILEREDPRDAFVSNDYADLASLPAGAVV 145
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG++RL I+
Sbjct: 146 GTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLRRLGLADRIRS 205
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ E+ P+ GQGA+ IE + + + + ++ T +V ERA L GSC+
Sbjct: 206 TIAPEESLPAAGQGALGIEIRADREEVRACLAPLHDAPTALAVTAERAVSRILGGSCQVP 265
Query: 248 IAGFAYCKGS-TLYFYGIVLASDG 270
+A FA G+ TL V + DG
Sbjct: 266 LAAFAQWSGAGTLRLRAFVASQDG 289
>gi|33520023|ref|NP_878855.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus]
gi|39931423|sp|Q7VRM4|HEM3_BLOFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33504369|emb|CAD83262.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus]
Length = 311
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 144/275 (52%), Gaps = 5/275 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGD-RITNRTLTEI 58
M+ K RI TR SPLA+ A + L H PH +IP+ T GD + + T
Sbjct: 1 MQAKILRIATRKSPLAICQACYVCNKLKHYH---PHIQTELIPIITTGDTSLHTVSKTNK 57
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG F +E+E LI D AVHS KD+ L K L I R D RD F+S ++
Sbjct: 58 IKKGAFIKELEYALIEHRADIAVHSMKDVTVLLPKELIIPVLCKRHDPRDAFVSIQYPNI 117
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L S+IGTSSLRR+ + RSD+ + D RG I TR+ KL+ + +AI+LA AG+ R
Sbjct: 118 HSLPTGSIIGTSSLRRQCQIRAQRSDLILHDLRGNINTRIKKLHQGQYNAIILAVAGLTR 177
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
LK K I+ ++ + P+ GQG I IE +N+ L+ + H++T + ERA
Sbjct: 178 LKLTKYIQTYIDPSELLPAMGQGVIAIECRINDINTISLLSPLYHKETSLCIKSERAVTT 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L+ C+ IA +A + + ++ ++ DG I
Sbjct: 238 YLESYCRLPIASYAEIQNNQIWLRALIGLPDGSII 272
>gi|256783360|ref|ZP_05521791.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 311
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLG-DLSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L
Sbjct: 64 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +
Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + T ER FL L G
Sbjct: 184 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG A + L V DGK+ R D +G A
Sbjct: 244 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVA 294
>gi|302556915|ref|ZP_07309257.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
gi|302474533|gb|EFL37626.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
Length = 311
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L P ++P+ T GD+ L+ + GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAAAR--PGVRTEVVPVKTTGDKWLG-DLSAVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++G D AVH KD+P L G +A+L R+D+RD + +L +LA
Sbjct: 64 KEVDAALLAGRADVAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELAP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L ++ + RG R+ KL +A A+LLA +G++R+ +
Sbjct: 124 GTRIGTSSVRRVAQLAVSHPHLTCVPLRGNANLRMEKLAAGEADALLLAVSGLERIGRAD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + H DT ER FL L G
Sbjct: 184 VISEVLSPEAMMPPIGAGILALQCREGDTALIEAVSALGHPDTHREATAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG+A S L V +DGK R D +G A
Sbjct: 244 CNSPIAGYAQVDLSGELSLRACVFTADGKTRLNAHEWAGRLDPATLGTSVA 294
>gi|256397425|ref|YP_003118989.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928]
gi|256363651|gb|ACU77148.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928]
Length = 317
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 153/295 (51%), Gaps = 7/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ R+GTR S LALA + +L + ++ ++T GD + L+ IGG G
Sbjct: 16 ERALRLGTRASTLALAQSGMVAEALTAATG---RAVELVHVTTYGD-TSREALSVIGGTG 71
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + + +G++D AVHS KD+PT +GL ++A R + D ++ L DL
Sbjct: 72 VFVNALREAIYAGDVDFAVHSLKDLPTAAPEGLHLAAITERAAVNDALVARDGLKLADLP 131
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT + RR ALL R D+ ++ RG ++TR+N + + A+++A AG++RL +
Sbjct: 132 AGAKVGTGAARRMALLKMIRPDLEIVPIRGNVDTRVNHVRSGDLDAVVVALAGLQRLGRA 191
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E+ + PSPGQGA+ +E +P+ EL+ V++ T +V ER LA L+
Sbjct: 192 EEATEVFGPDVILPSPGQGALAVEC--KDPELAELLAVLDSPLTRAAVVAERTMLAVLEA 249
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + + G A + L G+V G +S G + +GR AQ +
Sbjct: 250 GCSAPVGGHAIALDDNVLSLTGVVATVSGSRGLRLSHAGAVSEPEALGRRVAQAL 304
>gi|103488353|ref|YP_617914.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256]
gi|123379466|sp|Q1GP41|HEM3_SPHAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|98978430|gb|ABF54581.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256]
Length = 315
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 147/274 (53%), Gaps = 10/274 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR SPLA+A A ++L+ H + + I+P++ GDRI +R L E+GGK L+
Sbjct: 10 PLRIGTRASPLAMAQAHMAAAALIAAHGLAMAALEIVPMTATGDRIQDRALAEVGGKALW 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E++ L +G ID AVHS KD+ T + A L R D RD + AQ + +L
Sbjct: 70 TRELDAALDAGTIDVAVHSLKDVETLRDARFFLGAMLERADPRDRLVVREGIAAQKISEL 129
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSS RR A + R R D+ + RG + TRL KL +A A LLA AG++RL
Sbjct: 130 PHGARLGTSSPRRAAQVRRLRPDLDTVLLRGNVATRLAKLAAGEADATLLAAAGLERLGM 189
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I + E P+ QGAI IE ++ L+ I+H T +V ERA LA L
Sbjct: 190 HD-IGAVQGTELLLPAASQGAIGIECRADDAATIALLAAIDHAPTHRAVAAERALLAVLG 248
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
G C+S +A +A + VL D +IF E
Sbjct: 249 GDCRSPVAAYAEWQADG------VLRLDAEIFSE 276
>gi|312141093|ref|YP_004008429.1| hydroxymethylbilane synthase hemc [Rhodococcus equi 103S]
gi|325674097|ref|ZP_08153787.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707]
gi|311890432|emb|CBH49750.1| hydroxymethylbilane synthase HemC [Rhodococcus equi 103S]
gi|325555362|gb|EGD25034.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707]
Length = 334
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 150/290 (51%), Gaps = 16/290 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RIGTR S LA A R +L+ P +VII TKGD +T + IG
Sbjct: 18 DSRTLRIGTRGSLLATTQAGHVRDALIAAGH--PAELVII--KTKGD-VTAGPVQRIG-V 71
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F E+ + L++GE+D AVHS KD+PT L I+A RED RD ++ L +L
Sbjct: 72 GVFVAELREALVAGEVDVAVHSYKDLPTAQPDDLTIAAVPTREDPRDALVARDGLVLGEL 131
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S IGTS+ RR+A L + + RG I+TRL K+ + + AI++A AG+ R+ +
Sbjct: 132 PPGSRIGTSAPRRRAQLRAMGLGLEIEPLRGNIDTRLGKVASGELDAIVIARAGLSRIGR 191
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I E L P+P QGA+ +E +NP ++ ++ T +V ERA LAEL+
Sbjct: 192 TERITETLEPVQMLPAPSQGALAVECRSDNPDLIAILGELDDHATRAAVVAERALLAELE 251
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
C + + A S L DG++F E+S G C A G D
Sbjct: 252 AGCTAPVGAIAEVVES--------LDDDGRVFEELSIRG--CAAAIDGSD 291
>gi|87302648|ref|ZP_01085465.1| porphobilinogen deaminase [Synechococcus sp. WH 5701]
gi|87282992|gb|EAQ74949.1| porphobilinogen deaminase [Synechococcus sp. WH 5701]
Length = 317
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 147/300 (49%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MAGTTLRIASRRSQLAMVQTHWVRDELTRAH--PDLEISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117
KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + H S
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPDGLMLGCITEREDPADALVLHERHRGCS 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHFQFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGHRIDALIDPSISLHAVGQGALGIECRHGDSAVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+L+G C+ I + +G L G+V + DG G + D +G AQ +R
Sbjct: 239 RQLEGGCQVPIGVNSRFEGEELVLTGMVASLDGLRLIRDEARGPQQDPEAVGTSLAQLLR 298
>gi|150024157|ref|YP_001294983.1| hydroxymethylbilane synthase [Flavobacterium psychrophilum
JIP02/86]
gi|149770698|emb|CAL42162.1| Hydroxymethylbilane synthase [Flavobacterium psychrophilum
JIP02/86]
Length = 308
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 160/300 (53%), Gaps = 14/300 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK +IGTR S LAL A L D+ H II + ++GD I ++ L E+G
Sbjct: 1 MAKKTIKIGTRDSELALWQAHHVEKMLNDL----GHKTKIIAVKSQGDIILDKPLYELGI 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G+ID AVHS KD+PT L +G+ +A L R + +D+ + + +L
Sbjct: 57 TGIFTKTLDIAMVNGDIDIAVHSMKDVPTALPQGIVQAAVLERANEKDILVYNN--NLDF 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR-- 178
L + I T SLRR+A L + V+D RG + TR+ KL +N + + A AG++R
Sbjct: 115 LNTQATIATGSLRRQAQWLHKYPNHKVVDLRGNVNTRMQKLQDNNWNGAVFAAAGLERIN 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+K E I N++ P+P QGA+ + N+ + + +NH +T + ER FL
Sbjct: 175 IKPENYI----NLDWMIPAPAQGAMMVVAMGNDTYCLDALAELNHIETEITTYIERQFLR 230
Query: 239 ELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L+G C + I +A K T++F G++ + DG E+ + + +G A Q I
Sbjct: 231 TLEGGCTAPIGAYARFNEKDETIHFQGVLFSLDGSQKIEIKKIVEIQEWKQLGYHAGQEI 290
>gi|255280051|ref|ZP_05344606.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469]
gi|255269142|gb|EET62347.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469]
Length = 309
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 153/294 (52%), Gaps = 6/294 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IG+R S LA+ + + ++ + P + I+ + T GD+I +RTL ++GGKG
Sbjct: 2 KRTIIIGSRESRLAVIQSEIVKQAIE--QENPQLAVSILTMKTTGDKILDRTLDKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L+ D +VHS KD+P ++ K L + A+ RED+RDV + D +
Sbjct: 60 LFVKELDRALLEKRSDLSVHSLKDVPMEVPKELPLLAFSAREDVRDVLVLPEGAVEPDFS 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
G S RR + ++ RG + TRL KL+ + A++LA AG+KRL E
Sbjct: 120 --KPFGCSGRRRALQIKELYPHVTCHPVRGNVLTRLRKLDEGEYGALILAAAGLKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + E+ P+ GQG + ++ + +K + ++ D+ CERAF+ LDG
Sbjct: 178 GRISRYFSTEEMVPAAGQGILAVQGRCGEDHS--YLKAFSDDEARDAALCERAFVRALDG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C S +A +A +GS + G+ D + G R DA IG + A+Y+
Sbjct: 236 GCSSPVAAYARTEGSRILLTGLYYEEDTGRWCRGCLGGARTDAERIGAELAEYL 289
>gi|332519549|ref|ZP_08396016.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4]
gi|332045397|gb|EGI81590.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4]
Length = 527
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 159/296 (53%), Gaps = 12/296 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A +S L + H V++P+ + GD + ++ L E+G G+
Sbjct: 3 KTIRIGTRDSELALYQANAVKSQLEHL----GHKTVLVPVKSTGDIVLDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT ++ +++G+ID AVHS KD+PT L KG+ +A L R ++RD + T + A
Sbjct: 59 FTRTLDIAMLNGDIDIAVHSLKDVPTLLPKGIVQAAVLKRGNVRDTLVYKTTEEFLG-AR 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKR--LK 180
+VI TSSLRRKA L ++ D RG + TRL KL N ++ +A + A AGI R L+
Sbjct: 118 EAVIATSSLRRKAQWLNRYPTHTIEDIRGNVNTRLEKLKNTSRFNAAIFAAAGIGRLGLR 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + N+E P+P QGAI + + + + ++ INHE+T ER FL +L
Sbjct: 178 PETAV----NLEWMIPAPAQGAIMVTALEEDEETRAILAEINHEETQICTQIEREFLNKL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+G C + I Y K + F G++L+ +G V R + +I A Y+
Sbjct: 234 EGGCTAPIGALCYIKDEEVNFEGVLLSPNGTKKITVQRVKKLGEHTDIATWCADYV 289
>gi|298674197|ref|YP_003725947.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303]
gi|298287185|gb|ADI73151.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303]
Length = 308
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 143/267 (53%), Gaps = 7/267 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL L K N + + T GD T+R L E+GG G F E
Sbjct: 5 IGTRGSSLALTQTRRVSQML----KEEGVNTFLKIIKTSGDSFTDRPLHELGGVGAFVRE 60
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I+++++SGE+D AVHS KD+PT+ + L SA L R+ D ++ +L +L +VI
Sbjct: 61 IDERMLSGELDIAVHSMKDLPTERPEELPTSAVLKRDSPFDALLTRDGSTLDELPEGAVI 120
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK+ +LR+R D V RG I+TRL KL + I+LA AG++R+ + + +
Sbjct: 121 GTTSLRRKSQVLRYRPDFDVQSLRGNIDTRLKKLESGIYDGIILAEAGLRRMGWDIPVHQ 180
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+ + F PS QGAI + + +++ +V INH T ER + + G C
Sbjct: 181 -LDTDHFCPSANQGAIAVVAKSGD-ESENVVSRINHPQTKIETEIERILIGNVGGGCIVP 238
Query: 248 IAGFA-YCKGSTLYFYGIVLASDGKIF 273
I +A + ++ VLA DG +
Sbjct: 239 IGAYAEFVNDEKIHIRSEVLALDGSHY 265
>gi|257054363|ref|YP_003132195.1| porphobilinogen deaminase [Saccharomonospora viridis DSM 43017]
gi|256584235|gb|ACU95368.1| hydroxymethylbilane synthase [Saccharomonospora viridis DSM 43017]
Length = 316
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 156/295 (52%), Gaps = 17/295 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LA++ L + + + ++P+ST GDR ++ + EIG G+
Sbjct: 7 RTLRIGTRASNLAMSQTRTIAKMLEEAGQ----KVELVPVSTPGDR-SSAPIAEIG-VGV 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT + + L++ E+D AVHS KD+PT G+ ++A RED RDV IS +L +L
Sbjct: 61 FTSALREALLANEVDVAVHSYKDLPTAPQPGIVLAAVSKREDPRDVLISRDGLTLGELPP 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT S RR L + ++ RG I+TR+ K+ + + AI+LA AG+ R+ K
Sbjct: 121 GAKVGTGSPRRMTQLRALGLGLEIVPIRGNIDTRIAKVTSGELDAIVLAKAGLTRVGKLD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDG 242
+I E+++ P+P QGA+ +ET V++ + L++ +++HE T +V ERA LA L
Sbjct: 181 LITEVIDPMQILPAPAQGALAVETRVDDVDTEHLLRSIVDHEATRVAVAAERAVLATLQA 240
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + + A L S+G + +S G A D+ Q +R
Sbjct: 241 GCSAPVGALAEVVED--------LDSEGAVVERLSLRGVAATATE--GDSVQILR 285
>gi|326402301|ref|YP_004282382.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301]
gi|325049162|dbj|BAJ79500.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301]
Length = 335
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 156/312 (50%), Gaps = 11/312 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK---IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P R+GTR SPLAL ++L ++ P +ST GDR+T+R L EIGGK
Sbjct: 22 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 81
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114
GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I +
Sbjct: 82 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 141
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A
Sbjct: 142 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 201
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER
Sbjct: 202 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 261
Query: 235 AFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
A LA LDGSC++ I G A L+ G+ DG + S N DA +G +
Sbjct: 262 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAARLGAELG 321
Query: 294 QYIRFISNKNVF 305
+R S ++F
Sbjct: 322 ASLRRDSPADIF 333
>gi|29827579|ref|NP_822213.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680]
gi|39931490|sp|Q82P95|HEM32_STRAW RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName:
Full=Hydroxymethylbilane synthase 2; Short=HMBS 2;
AltName: Full=Pre-uroporphyrinogen synthase 2
gi|29604679|dbj|BAC68748.1| putative porphobilinogen deaminase [Streptomyces avermitilis
MA-4680]
Length = 314
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 142/291 (48%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++ + T GD+ L+++ GKG FT
Sbjct: 10 IRIVSRDSPMALAQVARVRAELAALH--PRTRTEVVAVKTTGDKWMG-DLSKVDGKGAFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L
Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTMFAAFLKRDDIRDALVHPGGLTLDELPP 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +E
Sbjct: 127 GTRIGTSSVRRVAQLAAAYPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRED 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L E P G G + ++ + E + + T ER FL L G
Sbjct: 187 VITEVLEPETMMPPIGAGILALQCREGDTGLIETISELGDPGTHREATAERMFLHVLQGH 246
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG+A + L V DGK R D +G A
Sbjct: 247 CNSPIAGYARTERNGELSLRASVFTLDGKTVLNAHEWAGRLDPATLGTSVA 297
>gi|255534181|ref|YP_003094552.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10]
gi|255340377|gb|ACU06490.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10]
Length = 311
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 150/273 (54%), Gaps = 17/273 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +IGTR SPLAL A E L + + H I P+ +KGD+ ++ L +G G+
Sbjct: 10 RSIKIGTRNSPLALWQAREVARHLQNNN----HTTDITPIISKGDKNLSQPLYTLGITGI 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT++++ L++ E+D AVHS KD+PT+L + ++I A L R+ +DV + + L L
Sbjct: 66 FTKDLDIALLNNEVDIAVHSLKDIPTQLPENVEIIAVLQRDYPQDVLVRK--KDAATLEL 123
Query: 124 HSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
H + I TSSLRR+A L+ D RG ++TRL KL N A + + A I+R+
Sbjct: 124 HQLKIATSSLRRRAFWLKEFPGTEFSDIRGNVQTRLTKLEENDFDATMFSLAAIERMGLS 183
Query: 183 KVIKEILNIEDFP---PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ E P P+P QG + + N+P+ +EL K INH +T ++ ER+FL+
Sbjct: 184 ------VDYEHLPLMIPAPAQGVVAVCARSNDPEIKELFKEINHRETRICIDIERSFLST 237
Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGK 271
L+G C + I FA + F G + + DG+
Sbjct: 238 LEGGCTAPIGAFAEINDLGEVRFTGRICSLDGQ 270
>gi|125975012|ref|YP_001038922.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405]
gi|256005102|ref|ZP_05430072.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360]
gi|281418570|ref|ZP_06249589.1| porphobilinogen deaminase [Clostridium thermocellum JW20]
gi|167008812|sp|A3DIF0|HEM3_CLOTH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125715237|gb|ABN53729.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405]
gi|255990953|gb|EEU01065.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360]
gi|281407654|gb|EFB37913.1| porphobilinogen deaminase [Clostridium thermocellum JW20]
gi|316939173|gb|ADU73207.1| porphobilinogen deaminase [Clostridium thermocellum DSM 1313]
Length = 292
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 154/277 (55%), Gaps = 7/277 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LA+ A S+ + P I ++ + T GD+I ++T+ +IGGKGLF
Sbjct: 3 IRVGSRESKLAVRQAQIVIDSIKKYN--PDIEIELVTMKTTGDKILDKTIDKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+ G++D VHS KDMP + L I A RED RDV + ++ ++ +
Sbjct: 61 KELDRALLDGKVDITVHSFKDMPMDIDDRLPIVAVSKREDPRDVLVLPKGKN--EIDFNG 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IG SS RRK + + +V RG + TRL KL+ + AI LAYAG+KRL E+ I
Sbjct: 119 PIGCSSSRRKIQIEKIYPGCTVEPIRGNVLTRLEKLDKGEYSAIALAYAGLKRLGLEERI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ QG I ++ + + ++ + +D+WD ER+F+ L+G C
Sbjct: 179 WRVFSTDEIVPAACQGIIAVQARKDFDAS--ILANFHDKDSWDVSVAERSFIKALNGGCS 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
S A + +G + G + +GKI+ ++++ G+R
Sbjct: 237 SPSAAYGVIQGEKIVLTGFYVDKNGKIY-KMTKTGDR 272
>gi|307266129|ref|ZP_07547673.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918819|gb|EFN49049.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 299
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 137/252 (54%), Gaps = 5/252 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++G+R S LAL T+ + ++ K I+ ++T+GD + ++ ++EIGGK
Sbjct: 2 KKVIKVGSRSSELALVQ---TQMVINEIKKFRQDFEFEIVKITTQGDALIDKPISEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP ++ + L++ A L RED +DVF+S DL
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPEKLKLMAVLKREDPKDVFVSRNGTKFIDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L R DI ++ RG + TRL K+ I+L+ AG+ RL
Sbjct: 119 KKGAKIGTSSLRRQVQLKALRPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + QE I T+ + ER L
Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVF 238
Query: 241 DGSCKSAIAGFA 252
+C+ +A
Sbjct: 239 GVNCRQPFGAYA 250
>gi|289577611|ref|YP_003476238.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9]
gi|289527324|gb|ADD01676.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9]
Length = 299
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 137/252 (54%), Gaps = 5/252 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++G+R S LAL T+ + ++ K I+ ++T+GD + ++ ++EIGGK
Sbjct: 2 KKVIKVGSRSSELALVQ---TQMVINEIKKFRQDFEFEIVKITTQGDALIDKPISEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP + +GL++ L RED RDVFIS +L
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSLKDMPYETPEGLKLIPVLKREDPRDVFISKDGTQFMNL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L RSD+ I RG I+TRL K+ I+L+ AG+ RL
Sbjct: 119 KEGAKIGTSSLRRQVQLKDLRSDMQTIPIRGNIKTRLRKIEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + QE I T+ + ER L
Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASIERELLKVF 238
Query: 241 DGSCKSAIAGFA 252
+C+ +A
Sbjct: 239 GVNCRQPFGAYA 250
>gi|224083036|ref|XP_002187797.1| PREDICTED: hydroxymethylbilane synthase [Taeniopygia guttata]
Length = 371
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 145/274 (52%), Gaps = 6/274 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
++ + R+GTR S LA + L +++ P + I+ +ST GD+I + L++IG
Sbjct: 26 VDGRAIRVGTRRSQLARIQTDSVVTMLRELY--PDLHFEIVAMSTTGDKILDTALSKIGE 83
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LFT+E+E L E+D VHS KD+PT L I A RE+ D + H K
Sbjct: 84 KSLFTKELENALERNEVDLVVHSLKDLPTSLPPDFTIGAVCKRENPLDAVVFHPKNCGKT 143
Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGI 176
L+L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+
Sbjct: 144 LSLLPEKSVIGTSSLRRAAQLKKKFPHLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGL 203
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KR+ E I ++L+ ED + GQGA+ +E + + +V ++ DT ERAF
Sbjct: 204 KRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAF 263
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+ L+G C +A K LY G V + DG
Sbjct: 264 MKRLEGGCSVPVAVNTLLKDGQLYLTGAVYSLDG 297
>gi|225548234|ref|ZP_03769519.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM
10507]
gi|225040673|gb|EEG50919.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM
10507]
Length = 291
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 150/292 (51%), Gaps = 8/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ + ++ L + + II + T GD I +RTL +IGGKGLF
Sbjct: 4 IRIGSRESKLAVIQSELVQNYL----RAQGLDAQIITMKTTGDIILDRTLDQIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+ G D +VHS KD+P ++ + L + AY RED RDV I Q K+L L
Sbjct: 60 KELDRALLDGRSDLSVHSLKDLPMEVAQDLPVVAYSKREDPRDVLI--LPQGEKELDLSK 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IG+SSLRR L + + RG + TRL KL++ + A++LA AG+KRL + I
Sbjct: 118 PIGSSSLRRCIQLKKLFPEAECKSVRGNVLTRLEKLDSGQYSALVLAAAGVKRLGLQGRI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+E+ P+ GQG + ++ + + N ERAF+ LDG C
Sbjct: 178 SRYFTVEEMLPAAGQGILAVQGKAGQDYS--YLGAYNDRQAQAEALAERAFVRWLDGGCS 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S +A A C+G L G+ +H+ G A +G + A+ ++
Sbjct: 236 SPVAAHAVCQGERLQMTGLYYHDLTGQWHKEQIAGETSQAKMLGVELAKRMK 287
>gi|313205044|ref|YP_004043701.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4]
gi|312444360|gb|ADQ80716.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4]
Length = 306
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 159/297 (53%), Gaps = 10/297 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K F + TR S LA +T L+ V K P I+ +ST GD +T++ LT GG G+
Sbjct: 3 KKFVVATRPSLLAYTQTQQT-VDLLRV-KNPDCEFEIVKISTHGDTVTDKPLTAFGGTGV 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L G+ A+HS KD+P+ +GL ++A+ R+D RD+ ++ S+ DL
Sbjct: 61 FVKELENALYEGKAHFAIHSLKDVPSIQPEGLVLAAFPTRQDPRDLLLTRGGVSVADLPS 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
VIGT S RR + + + I+ D RG I+TRL KL + + AI+LA AG+KRL KE
Sbjct: 121 PCVIGTGSPRRMVQVAKLKEQITFADLRGNIDTRLKKLEDGQYDAIVLAAAGLKRLGKEI 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + P+ GQGAI IE ++ + ++K IN T ++ ER+++ + G
Sbjct: 181 AESAYMPTDVCLPAIGQGAIAIECRADDAETIAMLKSINDAATETAIVAERSYMKTIGGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLAS--DGKI--FHEVSRNGNRCDAINIGRDAAQYI 296
CK + +A + + + ++L + G+I HE S DA +G+ + I
Sbjct: 241 CKFPLGAYATVESDEVNLH-VMLGNHHTGQIIRMHETS---TVADAEKLGQKLGEAI 293
>gi|283954165|ref|ZP_06371690.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414]
gi|283794444|gb|EFC33188.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414]
Length = 307
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 145/265 (54%), Gaps = 6/265 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL + L H+I +++ TKGD + + L +IGGKGLFT+E
Sbjct: 5 IATRKSQLALWQSEYIAQILKKTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + +
Sbjct: 62 LEESILRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSKNYKDFLSLPKGARV 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRRK LL R D+ +I RG + +R+ KL N + AI+LA AGIKRL +K +
Sbjct: 122 GTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGEFDAIILAMAGIKRLSLDKQVNF 181
Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+
Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
I A G + ++ DG
Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265
>gi|114329088|ref|YP_746245.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1]
gi|114317262|gb|ABI63322.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1]
Length = 344
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 159/320 (49%), Gaps = 20/320 (6%)
Query: 1 MEKKPFRIGTRCSPLALAH--AFETR-----SSLMDVHKIPPHNIVIIPLSTKGDRITNR 53
M P R+GTR SPLAL AF R L D+ H I +T GDR+ +R
Sbjct: 28 MHGLPLRVGTRASPLALVQTRAFLARLRSFCPILRDMEVFEEHQI-----NTTGDRVQDR 82
Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-- 111
L EIGGKGLF +EI + L ID AVHS KD+ T+L G+ ++ L RED RD I
Sbjct: 83 RLAEIGGKGLFAKEIHEALADRRIDFAVHSLKDLETQLPPGIVLACTLKREDARDAIILP 142
Query: 112 -----SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
L +++GTSS+RR+A L R D+ RG ++TRL KL +
Sbjct: 143 PGFTPPPPGDPFSVLQQGALVGTSSVRRQAQLAHARPDLRFATIRGNVQTRLAKLARGEC 202
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A LLA AG++RL E+ +L+ E P+ QG + + ++ ++L+ I +
Sbjct: 203 DASLLALAGLRRLDMEQAASVVLDTEIMVPAACQGIVGVTVREDDYALRDLLAGIEDREA 262
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
ERA L LDGSC++ I G A G L+ G+V A DG + G +A
Sbjct: 263 KAVSTAERALLNLLDGSCRTPIGGHARILSGGVLHLTGLVAAEDGSFLLRRTLQGAVSEA 322
Query: 286 INIGRDAAQYIRFISNKNVF 305
+G + + +R S ++F
Sbjct: 323 EALGAELGRSLRADSPPDIF 342
>gi|311896763|dbj|BAJ29171.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 318
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 151/285 (52%), Gaps = 15/285 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + V I + ++ ++T GD ++ +L IGG G+F
Sbjct: 3 PLRLGTRRSALAMAQSGMVAEA---VAGITGRRVELVEITTYGD-VSRESLARIGGTGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ G ID AVHS KD+PT GL ++A RED RD ++ +L +L
Sbjct: 59 VSALRDALLEGRIDLAVHSLKDLPTAAPAGLLLAAVPEREDARDALVARDGLTLAELVGK 118
Query: 125 SV-----IGTSSLRRKALLLRWR----SDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
S +GT S RR A L W +++ + RG ++TR+ + + + A++LA AG
Sbjct: 119 STGRAVRVGTGSPRRMAQLNAWARARGAELETVAIRGNVDTRIGFVASGELDAVVLATAG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + I E L+ E P+PGQGA+ +E +P ++ ++H T +V ERA
Sbjct: 179 LNRLGRAAEITEHLDTELMLPAPGQGALAVE--CVDPTLAAVLARLDHRPTRAAVVAERA 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
LA L+ C + +A A G+ L G+V ++DG ++S NG
Sbjct: 237 LLATLEAGCSAPVAALATWAGTELRLDGVVGSTDGTELIKMSANG 281
>gi|145220672|ref|YP_001131350.1| porphobilinogen deaminase [Mycobacterium gilvum PYR-GCK]
gi|315442377|ref|YP_004075256.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1]
gi|189028094|sp|A4T340|HEM3_MYCGI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145213158|gb|ABP42562.1| hydroxymethylbilane synthase [Mycobacterium gilvum PYR-GCK]
gi|315260680|gb|ADT97421.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1]
Length = 312
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 144/275 (52%), Gaps = 13/275 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +IG G+FT
Sbjct: 2 IRIGTRGSLLATTQAGTIRDALIAAG----HDAELVIISTEGDRRADEPIADIG-VGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +D AVHS KD+PT + I+A RED RD ++ L +L S
Sbjct: 57 AALREAIADNVVDAAVHSYKDLPTAVDPRFMIAATPVREDARDALVARDGMVLGELPAGS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +V+
Sbjct: 117 VIGTSSPRRVAQLKALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVAKAGLSRIGRLEVV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + +L+ ++ DT +V ER LAEL+ C
Sbjct: 177 TETLEPVQMLPAPAQGALAIECRAGDTALAQLLAELDDADTRAAVTAERTLLAELEAGCS 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + DG++F E+S G
Sbjct: 237 APVGAIAEVVES--------IDEDGRVFEELSLRG 263
>gi|291525403|emb|CBK90990.1| porphobilinogen deaminase [Eubacterium rectale DSM 17629]
Length = 338
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 139/277 (50%), Gaps = 32/277 (11%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ IGTR S LAL L + P + + + T GD + L +IG KG+F
Sbjct: 3 YLIGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +
Sbjct: 61 KEIEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------NNN------ 164
VIGT S RRK LL+ R D+ V+ RG I+TRL KL NNN
Sbjct: 121 VIGTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEK 180
Query: 165 -------KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+ I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K
Sbjct: 181 QNKYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAK 240
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
+ ++ E T ER FL ++ G+C +A AYC
Sbjct: 241 LDALSDEKTNLCAGIEREFLKQIGGNCHLPVA--AYC 275
>gi|238923292|ref|YP_002936807.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656]
gi|238874966|gb|ACR74673.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656]
Length = 338
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 139/277 (50%), Gaps = 32/277 (11%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ IGTR S LAL L + P + + + T GD + L +IG KG+F
Sbjct: 3 YLIGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +
Sbjct: 61 KEIEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------NNN------ 164
VIGT S RRK LL+ R D+ V+ RG I+TRL KL NNN
Sbjct: 121 VIGTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEK 180
Query: 165 -------KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+ I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K
Sbjct: 181 KNKYSEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAK 240
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
+ ++ E T ER FL ++ G+C +A AYC
Sbjct: 241 LDALSDEKTNLCAGIEREFLKQIGGNCHLPVA--AYC 275
>gi|225010397|ref|ZP_03700869.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C]
gi|225005876|gb|EEG43826.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C]
Length = 303
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 149/293 (50%), Gaps = 9/293 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LA+ A +T S + H I ++P+ + GD ++ L E+G G+
Sbjct: 3 KTLRIGTRDSALAMWQA-KTVQSQLAAHGIASE---LVPVKSLGDLKLDQPLYELGVTGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L++GEID AVHS KD+PT L KGL +A L R DV + H + L
Sbjct: 59 FTKTLDLALLAGEIDLAVHSYKDVPTVLAKGLSTAAVLKRASTADVLV-HKSPDFTTSGL 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I TSSLRRKA L + ++D RG ++TRL KL NN + A AG+ RL +
Sbjct: 118 Q--IATSSLRRKAQWLAKYPEHQLVDIRGNVQTRLEKLANNSWGGAIFAAAGLARL--DL 173
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + + ++ P+P QGA+ + + E + V+N T ER FL EL+G
Sbjct: 174 LPENAMRLDWMVPAPAQGAMVVVAQSAHTVLLEELSVLNDSQTALCTQIEREFLNELEGG 233
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + I L+F G++ + DGK E + A GR AQ I
Sbjct: 234 CTAPIGALCTTTQDQLHFIGVLHSLDGKQHIETNTFVPLDQAPGYGRKMAQKI 286
>gi|149278622|ref|ZP_01884758.1| porphobilinogen deaminase [Pedobacter sp. BAL39]
gi|149230617|gb|EDM36000.1| porphobilinogen deaminase [Pedobacter sp. BAL39]
Length = 526
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 143/255 (56%), Gaps = 14/255 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A + L ++ I+ T+GD+I N L ++ GKG FT+E
Sbjct: 6 IGTRGSDLALWQANFIKDRLAEIGAEAELKII----KTQGDKILNLRLDKLEGKGFFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-----SHTAQSLKDLA 122
+E++L+ G ID AVHS KD+PT GL I+A RED ++ + Q L L
Sbjct: 62 LEEELLGGTIDIAVHSHKDLPTTHPAGLTIAAVTEREDPSELLLILKDCVDIKQKLS-LK 120
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSS RRKA LL RSD+++ D RG + TR+ KL + AI+LA AG+ RL +
Sbjct: 121 TGAMVGTSSNRRKAQLLALRSDLNIEDLRGNVPTRIQKLRDENYDAIVLAKAGVNRLNID 180
Query: 183 --KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+++ + P+P QGA+ ++ N+ + L++ +NH+DT D + ER L
Sbjct: 181 LSEFHVEVIDPTEIVPAPAQGALAVQIRENDTELFALLQQLNHQDTIDEIAVERKVLNLF 240
Query: 241 DGSCKSAIAGFAYCK 255
+G C + YCK
Sbjct: 241 EGGCHMPLG--CYCK 253
>gi|319946908|ref|ZP_08021142.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641]
gi|319746956|gb|EFV99215.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641]
Length = 307
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 142/254 (55%), Gaps = 7/254 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++GTR S LA+ L + H P ++P T+GDR+ + +L IGGKG+
Sbjct: 2 RSIKVGTRKSQLAMTQTKMMVDRLKECH--PDVEFELVPYKTQGDRLVHVSLQTIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLA 122
F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I +L L
Sbjct: 60 FVKEIEQALLNRDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIYREEGMTLATLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179
+V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+
Sbjct: 120 QGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGYL 179
Query: 180 -KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + E LN +F P+ QGA+ IE ++ + E++ I+ ++ + + ER FL+
Sbjct: 180 DQSPSLNIEFLNPHEFIPAVSQGALAIECREDDEEVLEILASIHDKEVENCIQLERCFLS 239
Query: 239 ELDGSCKSAIAGFA 252
++ C + A
Sbjct: 240 LMNADCTFPVGAHA 253
>gi|296327549|ref|ZP_06870095.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155375|gb|EFG96146.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 298
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 142/276 (51%), Gaps = 6/276 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L + P + I + T GD+ +N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLVKDRLQGNY--PNLSFEIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE+KL+ GEID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQKLLDGEIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + ++ +K I++E V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKFLKSIHNETVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276
DG C + + ++ G + F V + +GK V
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQIRAV 273
>gi|328786215|ref|XP_624261.3| PREDICTED: porphobilinogen deaminase-like [Apis mellifera]
Length = 357
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 151/273 (55%), Gaps = 7/273 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL L + H P II +STKGD+I +++L +IG K LFT
Sbjct: 10 IRVGSRKSELALKQTKYVIECLKEYH--PTKEFQIITMSTKGDKILDKSLPKIGEKSLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
EE+E L SG +D VHS KD+PT L +G+ + A L RED RD + + ++L L
Sbjct: 68 EELELALESGRVDFVVHSLKDLPTSLPEGMALGAILKREDPRDAVVMSKKYKNKTLSTLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180
SVIGTSSLRR A L R + V + RG + TRL KL+ N AI+LA AG+KR+
Sbjct: 128 EGSVIGTSSLRRSAQLARNMPHLKVENIRGNLNTRLRKLDDENGPFAAIILAAAGLKRMN 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++L E+ + GQGA+ +E + K L++ + +T CER+FL L
Sbjct: 188 WENRISQLLEPEEALYAVGQGALGVECRETDWKILSLLEPLYDVETTLRCVCERSFLKTL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
G C + +A + K L G V + DG+ F
Sbjct: 248 GGGCSAPVAVSSTLKNKILTVTGAVWSLDGQKF 280
>gi|322695309|gb|EFY87119.1| porphobilinogen deaminase [Metarhizium acridum CQMa 102]
Length = 327
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 147/281 (52%), Gaps = 12/281 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR SPLA+A A +SL V P + I ++T GDR N L GG
Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSV--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----- 115
KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV + A
Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLA 172
++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + + AI+LA
Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178
Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG+ R+ + I + L++++ + GQGA+ +E + + +K I H DT +
Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEQVLRALKEIEHRDTLLAC 238
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
ER+ + EL+G C I L V++ GK
Sbjct: 239 LAERSLMRELEGGCSVPIGVETKWADGKLRLRATVVSVTGK 279
>gi|147920614|ref|YP_685587.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I]
gi|121683115|sp|Q0W5T2|HEM3_UNCMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|110620983|emb|CAJ36261.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I]
Length = 303
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 138/266 (51%), Gaps = 6/266 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A + R L K I + T GD + L + G G F
Sbjct: 1 MRIGTRGSKLALAQAEKVRRLL----KEQGVEATITVIKTSGDVQKDSPLYMMKGYGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ L+ E+D AVHS KD+PT + L +A L RE DV + A+ L DL +
Sbjct: 57 REIDDLLLKNEVDLAVHSLKDIPTVRPENLVTAAVLKRESALDVAVIRNAERLADLPEGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR A++ R + D RG ++TRL KL + + AILLA AG+ RL + +
Sbjct: 117 VVGTSSTRRAAMIYRHYPGLVTKDIRGNVDTRLRKLRDGEYDAILLAEAGLIRLGLDLKV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ +F P+ QG I I P+A E+VK +N E TW ER A LDG C
Sbjct: 177 -ERLDPYNFVPAANQGVIAIVARQGTPEA-EVVKELNDETTWIETRVERIIAAGLDGGCV 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
+ +A G + G VL+ DG+
Sbjct: 235 VPMGVYATRVGDEIDVIGEVLSLDGR 260
>gi|109108912|ref|XP_001101850.1| PREDICTED: porphobilinogen deaminase isoform 7 [Macaca mulatta]
Length = 361
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|109108922|ref|XP_001101575.1| PREDICTED: porphobilinogen deaminase isoform 4 [Macaca mulatta]
gi|109108924|ref|XP_001101668.1| PREDICTED: porphobilinogen deaminase isoform 5 [Macaca mulatta]
Length = 344
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270
>gi|298207313|ref|YP_003715492.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559]
gi|83849949|gb|EAP87817.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559]
Length = 305
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 11/291 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A ++ L ++ + V++P+ + GD I ++ L E+G G+
Sbjct: 3 KVIRIGTRDSELALWQANTVKAQLENLG----YKTVLVPVKSTGDLILDQPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +++G++D AVHS KD+PT L KG+ A L R +D+ + + L L
Sbjct: 59 FTKTLDVAMVNGDVDIAVHSMKDVPTALPKGIMQGAVLKRAATKDILVH---KGLDFLEA 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRRKA L + V+D RG + TRL KL +N + + A AG+ R+
Sbjct: 116 EGTIATGSLRRKAQWLNKYPNHKVVDLRGNVNTRLQKLEDNSWNGAIFAKAGLTRI---N 172
Query: 184 VIKE-ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E + ++ P+P QGA+ I + +E V +N + ER FL L+G
Sbjct: 173 VLPEHFIELDWMLPAPAQGAMVIAVMEQDVFCKEAVSKLNDHFSEICTTIEREFLKTLEG 232
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + I A + ++F G + + DGK E+ + + + N+GR+ A
Sbjct: 233 GCTAPIGALAVIEDKDIWFRGCLFSLDGKQKLEIEKRVSLKENRNLGRNCA 283
>gi|91084135|ref|XP_967479.1| PREDICTED: similar to porphobilinogen deaminase [Tribolium
castaneum]
gi|270006650|gb|EFA03098.1| hypothetical protein TcasGA2_TC013007 [Tribolium castaneum]
Length = 460
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 164/318 (51%), Gaps = 20/318 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E + R+G+R S LAL S L +H P + I+ +ST GD++ + L +IG K
Sbjct: 3 EIEKIRVGSRKSELALIQTRHVISLLKKIH--PGKDFEIVTMSTLGDKVLDIPLPKIGEK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
LFT+E+E L +G +D VHS KD+PT L G+ I A L RED RD + H L
Sbjct: 61 SLFTKELEAALSTGCVDFVVHSLKDLPTVLPPGMAIGAVLTREDPRDALVLQKDHDKYLL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L SVIGTSSLRR A L R + V RG + TRL KL+ K AI+LA AG+
Sbjct: 121 ETLPEGSVIGTSSLRRGAQLARKYPHLKVESIRGNLNTRLKKLDELGKYQAIILASAGLI 180
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ I +IL+ ++ + GQGA+ +E ++ K EL+K + T V ER+FL
Sbjct: 181 RMGWTSRISKILDSDELLYAVGQGALAVECRESDEKTIELLKPLYDVQTALRVISERSFL 240
Query: 238 AELDGSCKSAIA---GFAYCKGS--TLYFYGIVLASDGK--IFH----EVS-RNGNRCDA 285
L G C + +A + K + TL G V + DGK I E+ +N RC A
Sbjct: 241 KTLGGGCSAPVAVSSDLSRLKDNKHTLKLKGAVWSLDGKEEIIETGECEIDIKNTQRCTA 300
Query: 286 --INIGRDAAQYIRFISN 301
N + +R I N
Sbjct: 301 CPFNTSNQSTSCVRDIEN 318
>gi|21221749|ref|NP_627528.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289770973|ref|ZP_06530351.1| porphobilinogen deaminase [Streptomyces lividans TK24]
gi|11386858|sp|Q9WX16|HEM31_STRCO RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName:
Full=Hydroxymethylbilane synthase 1; Short=HMBS 1;
AltName: Full=Pre-uroporphyrinogen synthase 1
gi|5123663|emb|CAB45352.1| putative porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289701172|gb|EFD68601.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 319
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 155/290 (53%), Gaps = 15/290 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59
M +K R+GTR S LA+A + + ++ V P + ++ ++T GD T+R L +IG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGD--TSREHLAQIG 55
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ A+ L
Sbjct: 56 GTGVFVAALRDALLRGEVDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLT 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
DL + +GT + RR A L + +I + RG ++TR+ + + + A++LA AG
Sbjct: 116 DLPRGARVGTGAPRRMAQLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAG 175
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+
Sbjct: 176 LNRVGRIDEVTDFLSVDTVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERS 235
Query: 236 FLAELDGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG 280
LA L+ C + + A G T + G+V +DG ++S G
Sbjct: 236 LLAALEAGCSAPVGALADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTG 285
>gi|19703980|ref|NP_603542.1| porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|25453023|sp|Q8RFP5|HEM3_FUSNN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|19714161|gb|AAL94841.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 298
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 138/266 (51%), Gaps = 5/266 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L + P + I + T GD+ +N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLVKDRLQGNY--PNLSFEIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ GEID AVHS KDMP K L A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGEIDIAVHSMKDMPAVSAKSLICGAIPDREDPRDVLVSKNGL-LVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL 266
DG C + + ++ G + F + L
Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTAVYL 264
>gi|72383664|ref|YP_293019.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL2A]
gi|123773715|sp|Q46GS7|HEM3_PROMT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72003514|gb|AAZ59316.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. NATL2A]
Length = 315
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 152/300 (50%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQREH--PDLVITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ G + AVHS KD+PT L GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPDGLILGCITKREDPSDALVVNEKNQIHK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE K +++K + HE T ER+FL
Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK + G+ A IG D A ++
Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298
>gi|322389389|ref|ZP_08062943.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903]
gi|321143877|gb|EFX39301.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903]
Length = 307
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 146/259 (56%), Gaps = 8/259 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++GTR S LA+ L + H P + ++P T+GDR+ + +L IGGKG+
Sbjct: 2 RSIKVGTRKSQLAMTQTKMVVERLKECH--PEVDFELVPYKTQGDRLVHVSLQTIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLA 122
F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I +L L
Sbjct: 60 FVKEIEQALLNKDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIFREEGMTLATLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179
+V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+
Sbjct: 120 QGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGYL 179
Query: 180 -KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + E L+ + F P+ QGA+ +E ++ + E++ I+ ++ + + ER+FL+
Sbjct: 180 DQSPSLNLEFLDPQTFIPAVSQGALAVECREDDEEVLEILASIHDKEVENCIQLERSFLS 239
Query: 239 ELDGSCKSAIAGFA-YCKG 256
++ C + A Y G
Sbjct: 240 LMNADCTFPVGAHAQYIDG 258
>gi|158317872|ref|YP_001510380.1| porphobilinogen deaminase [Frankia sp. EAN1pec]
gi|158113277|gb|ABW15474.1| porphobilinogen deaminase [Frankia sp. EAN1pec]
Length = 354
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 148/274 (54%), Gaps = 24/274 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ ++P R+GTR S LA A + + +L P + ++P+ T GD+ + +++IGG
Sbjct: 15 LARRPLRLGTRRSALARAQSEKVAETLRTRLSRP---VELVPIVTAGDQ-SQVAISQIGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L++GEID AVHS KD+PT GL ++A R D RDV +S + + L +
Sbjct: 71 TGVFVSALRDALLAGEIDLAVHSLKDLPTATPDGLVLAAVPRRADTRDVLVSPSGRRLSE 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A LL V+ RG ++TR+ K + + A++LA+AG+ RL
Sbjct: 131 LGPGARVGTGSPRRAAQLLALGHGFEVVPIRGNVDTRIKKAIDGEVDAVVLAHAGLDRLD 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAI---CIETHVN--------NPKA--------QELVK-V 220
+ + EI++ E P+PGQGA+ C+ T P+A EL++ V
Sbjct: 191 RLDAVTEIISPEVMLPAPGQGALAIECVRTPAGGGPAHDQTGPEAGRGFDEGLAELLRFV 250
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
++ + +V ERAFLA ++ C + + A+
Sbjct: 251 LDDATSSVAVRAERAFLAGIEAGCTAPVGALAHV 284
>gi|313901685|ref|ZP_07835116.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965]
gi|313468036|gb|EFR63519.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965]
Length = 362
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 159/312 (50%), Gaps = 23/312 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A L H P + ++P++T GDR +R L + G F
Sbjct: 6 LRIGTRASALARIQAQWVARQLETHH--PGLRVELVPVTTLGDRNRSRPLYALSSPGAFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------------- 111
+E+E+ L+ G ID AVHSAKD+PT+L +GL+++A+ RED D +
Sbjct: 64 KELEEALLEGRIDLAVHSAKDVPTRLPEGLELAAFPQREDPADALVIPRPATGRLSVRGP 123
Query: 112 -------SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164
S L L + +GTSSLRR+A L R D++V RG ++TRL +L+
Sbjct: 124 GGEEPPGSEARDLLAALPPGARVGTSSLRRQAWLRARRPDLAVEPARGNLDTRLRRLDEG 183
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
A+LLA AG++RL I ++ + P+PGQGA+ +E + + V+V++
Sbjct: 184 HWDALLLAAAGLRRLGFAGRISALVPPLELLPAPGQGALAVEIRAGDEAVRRRVQVLDRP 243
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
+ +V ERAFLAEL G+C+ + +A +G + G+V G + G+ D
Sbjct: 244 EVSRAVRAERAFLAELGGTCRVPLGAWARVQGGRIVIDGMVAGPAGSPWLSGRGEGSLSD 303
Query: 285 AINIGRDAAQYI 296
GR A+ +
Sbjct: 304 PEGTGRRLAEQL 315
>gi|296274257|ref|YP_003656888.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299]
gi|296098431|gb|ADG94381.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299]
Length = 312
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 144/248 (58%), Gaps = 5/248 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + ++ L+ + P I + STK D+I + L +IGGKGL
Sbjct: 2 KKIVIATRKSKLALWQSEYIKAELLKHY--PDMVIELKTFSTKADKILDVPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E L + E D AVHS KD+P + +G ++A R D RD F+S S+ DL
Sbjct: 60 FTKELEIALENKEADIAVHSLKDVPVEFEEGFVLAALTKRFDPRDAFLSEKYASITDLPN 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++IGT+SLRR+ L R DI + D RG I TR+ KL + AI+LA G+++L+ E
Sbjct: 120 GAIIGTTSLRRRMELKLLRPDIELKDLRGNINTRIAKLKAGEYDAIILAATGVQKLQIED 179
Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K ++I++ PS GQ + IET ++NP+ E++ V++ ++ ER+F+ L+
Sbjct: 180 EVKYFTPISIDEMIPSMGQATLGIET-LDNPELVEILSVLHDKNAEIESTIERSFVHTLE 238
Query: 242 GSCKSAIA 249
G C+ I
Sbjct: 239 GGCQVPIG 246
>gi|158287571|ref|XP_564464.3| AGAP011080-PA [Anopheles gambiae str. PEST]
gi|157019715|gb|EAL41625.3| AGAP011080-PA [Anopheles gambiae str. PEST]
Length = 599
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 154/284 (54%), Gaps = 19/284 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII-PLSTKGDRITNRTLTEIGGKG 62
K R+G+R S LAL +T+ + + K+ P + I ++T GDR+ N++L +IG K
Sbjct: 12 KTIRVGSRKSELALT---QTKHVISLLQKLNPDVVYEIHTMTTVGDRVLNKSLPKIGEKS 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + H +L
Sbjct: 69 LFTKDLEDALRTGGVDFVVHSLKDLPTSLPLGMAIGAVLEREDPRDALVLNERHRGCTLA 128
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
L S++GTSSLRR A L R+ S ++V D RG + TRL KL+ +K I+LA AG+
Sbjct: 129 TLPRGSIVGTSSLRRSAQLARYYSHLAVCDIRGNLNTRLAKLDAEASKFAGIILAQAGLV 188
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ K I +I+ + + GQGA+ +E N+ ++ + H +T + ER+FL
Sbjct: 189 RMGWNKRIDQIIEPHEILYAVGQGALAVECRSNDEYILGMLGKLCHLETQCRILTERSFL 248
Query: 238 AELDGSCKSAIAGFAYCK----------GSTLYFYGIVLASDGK 271
L G C + +A K GS L G V + DGK
Sbjct: 249 KTLGGGCSAPVAVRTDLKRRWRADDAEDGSPLVVEGAVWSLDGK 292
>gi|260654411|ref|ZP_05859901.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1]
gi|260631044|gb|EEX49238.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1]
Length = 714
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 143/271 (52%), Gaps = 8/271 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+ +R S LA+A ++R +H+ ++ IIP T+GD + +R L GGKGL
Sbjct: 424 RPLRLASRESELAMA---QSRLVAERLHEATGFDVEIIPFRTRGDAVADRRLESAGGKGL 480
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++SG+ D AVHS KDMP+ GL +A + R+ D + + + +
Sbjct: 481 FVKELERAILSGQADLAVHSLKDMPSSCPDGLAFAALMDRQTAFDCLVLRPGLTGRPVR- 539
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IGTSS RR A SD + RG + TRL+KL+ + A++LA AG++RL ++
Sbjct: 540 ---IGTSSARRIAQGRALFSDAQFVPLRGNLRTRLSKLDGGEFDALILAEAGLRRLGLQE 596
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + + + PS GQG + ++ + P +LV ++ ERAF+ L+G
Sbjct: 597 RVSRVFSADQMIPSAGQGTLAVQCPFDGP-VFDLVSQLDEPAVRTCCLAERAFIDRLNGG 655
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274
C + +A G T+ G+ + DGK
Sbjct: 656 CTAPHGAYARVDGETIEMIGLYVRPDGKTLS 686
>gi|86609244|ref|YP_478006.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557786|gb|ABD02743.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 310
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 153/297 (51%), Gaps = 9/297 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LAL L + H P + + LST+GD I + L +IG KGLFT
Sbjct: 1 MRIASRKSELALVQTQWVMGQLQEHH--PGLPLELNTLSTQGDIILDVALAKIGDKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH- 124
+E+E L++G D AVHS KD+PT+L +GL + A RED D + + +D L
Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITRREDPLDALV--VGEKFRDYRLAT 116
Query: 125 ----SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+VIGTSSLRR A L + D RG + TRL KL + ++LA AG+KRL
Sbjct: 117 LPEGTVIGTSSLRRLAQLRHAFPHLHFKDVRGNLNTRLAKLERGEYDGLILAVAGLKRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I E+L+ + GQG++ IE + + EL++ + + ERAFL L
Sbjct: 177 KADRIHEVLDPGVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I + +G L+ G+V DG+ ++ G+ D +G A+ ++
Sbjct: 237 EGGCQVPIGVHSQVQGEALHLTGMVADLDGRRLIRDTQTGSTADPEAVGMALAEKLK 293
>gi|109108914|ref|XP_001101764.1| PREDICTED: porphobilinogen deaminase isoform 6 [Macaca mulatta]
Length = 391
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 51 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 108
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 109 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 168
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 169 EKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 228
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 229 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 288
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 289 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 317
>gi|330804637|ref|XP_003290299.1| porphobilinogen deaminase [Dictyostelium purpureum]
gi|325079586|gb|EGC33179.1| porphobilinogen deaminase [Dictyostelium purpureum]
Length = 319
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+ IG+R S LA+ R L +++ P + I + T GD++ + +L++IG K
Sbjct: 3 ERNTVYIGSRKSQLAMLQTEWVRDRLQELN--PNIKVEIKTMDTTGDKVLDVSLSKIGDK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----- 116
GLFT+E+E +++G +D AVHS KD+PT+L GL++ A R D FI++ +
Sbjct: 61 GLFTKELEDMMLNGSVDLAVHSLKDIPTRLPDGLKLGAITKRYSTSDAFIANVKKHGKDC 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
L DL ++IG+SSLRR A L + + D RG + TR NKL+ +++ ++LA A
Sbjct: 121 KLSDLPNGALIGSSSLRRVAQLKKSYPHLQFKDIRGNLNTRFNKLDAVDSEYDGMILAVA 180
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++R+ I +++ E + GQGA+ IE N+P +++++ +NH ++ ER
Sbjct: 181 GLERMNLTDRISQVIPDEISLYAVGQGALGIECKENDPFIEKILEPLNHSESMMRCKAER 240
Query: 235 AFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ L EL+G C I + + L GIVL DG + E G +G+D A
Sbjct: 241 SMLRELEGGCHVPIGVVTKINQNNILEIKGIVLNLDGSKYIESYIEGPVEQYEQLGKDIA 300
>gi|326336014|ref|ZP_08202190.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691811|gb|EGD33774.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 308
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 159/319 (49%), Gaps = 35/319 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RIGTR S LAL A + +S L++ P ++P+ ++GD + L +G G
Sbjct: 2 KKTLRIGTRDSELALWQARKVQS-LLEALGYP---TTLVPVKSQGDLTLDIPLYTMGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV--------FISHT 114
+FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV F+SHT
Sbjct: 58 VFTKVLDVAMLQGVIDIAVHSMKDVPTTLPKGIIKGAILKRANVQDVLVYKENLDFLSHT 117
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
H+ I T SLRRKA LR V + RG I TRL KL+ + + A A
Sbjct: 118 ---------HATIATGSLRRKAQWLRRFPTHLVENLRGNINTRLEKLHKSPWQGAIFAAA 168
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
++RL K++V ++ P+P QGAI + + + +E + +IN + T N ER
Sbjct: 169 ALERLDKKEV--NAFPLDWMTPAPAQGAIMVVSKAEDTYTKEALALINDQPTDIETNIER 226
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI------ 288
FL L+G C + I A G T+ F G + + DGK EV + + D N
Sbjct: 227 RFLKRLEGGCTAPIGAKATLDGKTISFVGNLFSLDGKHAIEVKKTISLDDIENFPEACAD 286
Query: 289 ------GRDAAQYIRFISN 301
G D Q IR + N
Sbjct: 287 EILLKGGADLMQEIRKVMN 305
>gi|291546286|emb|CBL19394.1| hydroxymethylbilane synthase [Ruminococcus sp. SR1/5]
Length = 257
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 139/255 (54%), Gaps = 4/255 (1%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T GD I +RTL ++GGKGLF +E++K LI G +VHS KDMP ++ + L + A+
Sbjct: 1 MKTTGDIILDRTLDKVGGKGLFVKELDKALIDGRSILSVHSLKDMPMEVPEELPLLAFSK 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RDV + S +L +G SSLRR L + D+ V RG ++TRL KL+
Sbjct: 61 REDPRDVLVLPEGAS--ELDKSKPLGCSSLRRTLQLKKLYPDMDVRSIRGNLQTRLRKLD 118
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ A++LA AG+KRL I ++ P+ GQG + ++ +A + ++
Sbjct: 119 EGQYSALILAAAGLKRLGLGSRINRYFTADEIIPAAGQGILAVQGR--KGEAYDFLEGYC 176
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+D W + + ERAF+ LDG C S +A A G +Y G+ + + GN+
Sbjct: 177 DKDAWTAGSAERAFVKLLDGGCSSPVAAHAEILGDEIYLRGLYYNEKDGSYVTGTLRGNK 236
Query: 283 CDAINIGRDAAQYIR 297
DA ++GR+ A+ +R
Sbjct: 237 ADAESLGRELAETLR 251
>gi|296138401|ref|YP_003645644.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162]
gi|296026535|gb|ADG77305.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162]
Length = 318
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 145/276 (52%), Gaps = 14/276 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ P +VI+ +T GD +++ + +IG G+F
Sbjct: 14 PLRIGTRGSLLATTQAGTVRDALIAAGH--PAELVIV--TTPGD-LSSDPVEKIG-VGVF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + L +GE+D AVHS KD+PT L ++A PRED RD ++ L +L
Sbjct: 68 TSALRDALANGEVDVAVHSYKDLPTAPDDRLVLAAVPPREDSRDALVARDGMVLGELPAG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSS RR L + + RG +++RL K+ + + AI++A AG+KR+ +
Sbjct: 128 SVVGTSSPRRATQLTALGLGLEIRPLRGNLDSRLRKVADGELDAIVVALAGLKRIGRHDE 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L+ P+P QGA+ +E + Q ++ ++ T +V ERA LAEL+ C
Sbjct: 188 VTEALDPVQMLPAPAQGALAVECRRGDADLQSVLSELDDHWTRAAVTAERALLAELEAGC 247
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S L DG+IF E+S G
Sbjct: 248 TAPVGAIAEVVES--------LDDDGRIFEELSLRG 275
>gi|194477303|ref|YP_002049482.1| porphobilinogen deaminase [Paulinella chromatophora]
gi|171192310|gb|ACB43272.1| porphobilinogen deaminase [Paulinella chromatophora]
Length = 313
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 5/269 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LA+ R L H P I I ++T+GD+I + L +IG KGLFT
Sbjct: 6 LRIASRRSQLAMVQTHWVRDQLAQAH--PSLEITIETMATQGDKILDVALAKIGDKGLFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E +++ D AVHS KD+PT L GL + RED D + + + L L
Sbjct: 64 KELEAQMLVNRADIAVHSLKDLPTNLPDGLVLGCVTEREDPADALVINKKYQDRLLDTLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A L + D RG + TRL KL++ + ++LA AG++RL
Sbjct: 124 NGSIVGTSSLRRLAQLRHHFPHLVFKDIRGNVITRLEKLDSGEFDCLILAAAGLQRLGLG 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EI++ + GQGA+ IE + + +KV+ H T ERAFL EL+G
Sbjct: 184 SRIHEIIDSSISLHAVGQGALGIECRDGDLDILKQIKVLEHAPTNYRCLAERAFLRELEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C+ I KG+ L G+V + DGK
Sbjct: 244 GCQVPIGVNTRIKGNQLILTGMVASLDGK 272
>gi|118101810|ref|XP_417846.2| PREDICTED: similar to Hydroxymethylbilane synthase [Gallus gallus]
Length = 358
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 140/271 (51%), Gaps = 6/271 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA L + + P I+ +ST GD+I + L++IG K L
Sbjct: 16 RAIRVGTRRSQLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKSL 73
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 74 FTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSV 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRL 179
L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR+
Sbjct: 134 LPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRM 193
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I ++L+ ED + GQGA+ +E + + +V + +T ERAF+
Sbjct: 194 GWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSALQDGETVLCCIAERAFMKR 253
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+G C +A K LY G V + DG
Sbjct: 254 LEGGCSVPVAVNTMLKDGQLYLTGAVYSLDG 284
>gi|21227846|ref|NP_633768.1| porphobilinogen deaminase [Methanosarcina mazei Go1]
gi|23821683|sp|Q8PW57|HEM3_METMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|20906258|gb|AAM31440.1| Porphobilinogen deaminase [Methanosarcina mazei Go1]
Length = 316
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLFTE 66
IGTR S LALA E + L+ K +I II T GDR T+R L + GG G F
Sbjct: 3 IGTRGSQLALAQT-ENVARLLK-EKGVETSIKII--KTSGDRFTDRPLHAVSGGVGAFVR 58
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E++ +++GEID AVHS KDMPT K + A L R+ D+ +++ L +L S+
Sbjct: 59 ELDDVMLAGEIDIAVHSMKDMPTIRPKAIPTVAVLKRDTPFDILLTYDGTPLDELPEQSI 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSSLRR A + R+R DI + RG I+TRL KL + I+LA AG++R+ E +
Sbjct: 119 IGTSSLRRTAQIRRYRPDIITQNLRGNIDTRLRKLREGQYDGIMLAKAGLERMGWE-IEG 177
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
EI + + F PSP QG + + T +A+ V +++H ++ ER +AEL G C +
Sbjct: 178 EIFSPDFFCPSPNQGTVAVVTR-EGTEAEAAVSMLDHTESRIVTEIERILIAELGGGCTT 236
Query: 247 AIAGFAYCKG--STLYFYGIVLASDGK 271
+ +A ++ VL+ DG+
Sbjct: 237 PVGSYAEITPDRQEIHVRAEVLSLDGR 263
>gi|123965794|ref|YP_001010875.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515]
gi|158512730|sp|A2BVF7|HEM3_PROM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123200160|gb|ABM71768.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515]
Length = 316
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 9/303 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTKLKLKIASRRSKLAMVQTLWVKEQLE--KNIPNLEVSIESMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117
KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLIGKADIAVHSLKDLPTNLPDGLKLGCITKREDPSDALVVNKKNEIYQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L ++ D RG + TR+ KL++ + I+LA AG+K
Sbjct: 119 LESLPAGSIVGTSSLRRLAQLRYKFPYLNFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--ERA 235
RL E I +I+ E + GQGA+ IE + + +++ V+ ED S C ER+
Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSEDKEVLKIISVL--EDKASSQKCLAERS 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
FL EL+G C+ I + + + G+V + DGK + +GN +G+ A+
Sbjct: 237 FLRELEGGCQVPIGVNSSIQNDEICLKGMVASIDGKKLIKDESSGNVKYPEEVGKKLAEK 296
Query: 296 IRF 298
++
Sbjct: 297 LKL 299
>gi|68068433|ref|XP_676126.1| porphobilinogen deaminase [Plasmodium berghei strain ANKA]
gi|56495675|emb|CAH94424.1| porphobilinogen deaminase, putative [Plasmodium berghei]
Length = 383
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 62/352 (17%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITNRTLTEIGGK 61
K IGTR SPLA+ + + + L+ K NI +I P+ T GD+I ++T+ GGK
Sbjct: 16 KEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFGGK 75
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL--- 118
G+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S +SL
Sbjct: 76 GIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLRDI 135
Query: 119 ---------------------KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
KD+ L I TSSLRR + + ++ + RG I TR
Sbjct: 136 NKELSQKNITNNISSSSHVIDKDIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINTR 195
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL--NIEDFP-------------------- 195
+ KL N +I++A+ G++RL +KV+ +I+ NI+ P
Sbjct: 196 IAKLFNETFDSIIIAFCGLERLISKKVLGQIMKNNIKSKPYIINYKDISIDLSRLNIQKL 255
Query: 196 ------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
P+ QG I + ++ NN + +++K IN+E + + ER FL ++DGSC I
Sbjct: 256 NTNIMCPALCQGIIAVTSNKNNSEISQILKNINNEKSQIMGSIERTFLHKIDGSCTMPIG 315
Query: 250 GFAYCKGSTLYFYGIVLASDG----KIFHEVSRNGNRCDAINIGRDAAQYIR 297
G+ + ++F I+ +G KI +V R+ N D I +AA+ I+
Sbjct: 316 GYTKFSKNKIFFNAIINDINGLENYKI--KVVRHLNNLDG--IADEAAEKIK 363
>gi|307331356|ref|ZP_07610476.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
gi|306882979|gb|EFN14045.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
Length = 329
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 158/303 (52%), Gaps = 19/303 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGL 63
P R+GTR S LA+A + + +V P + ++ ++T GD T+R L +IGG G+
Sbjct: 15 PLRLGTRRSALAMAQSGLVADLVREVTGRP---VELVEITTYGD--TSREHLAQIGGTGV 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + + L+SGEID AVHS KD+PT GL+++A RED RD I+ + L
Sbjct: 70 FVSALREALLSGEIDLAVHSLKDLPTAEPDGLRLAAIPRREDPRDALIARDGLTFAQLPP 129
Query: 124 HSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
S IGT S RR A L W DI + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 130 GSRIGTGSPRRAAQLNAWARAFGLDIETVPIRGNVDTRIGYVRSGRLDAVVLAAAGLIRL 189
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+L++ P+PGQGA+ +E ++ + I+ T +V ER+ LA
Sbjct: 190 GRIGEATELLDVGHVLPAPGQGALAVECAASSVALTARLAEIDDPYTRVAVTAERSLLAA 249
Query: 240 LDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290
L+ C + + A G + + G+V +DG ++S G + +A ++GR
Sbjct: 250 LEAGCSAPVGALADLLADGQAVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPSEAGDLGR 309
Query: 291 DAA 293
+ A
Sbjct: 310 ELA 312
>gi|291523525|emb|CBK81818.1| porphobilinogen deaminase [Coprococcus catus GD/7]
Length = 799
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 142/277 (51%), Gaps = 20/277 (7%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P I I TKGDR +++L+ G KG FT+E+E ++ G ID AVHSAKD+P +L +
Sbjct: 16 PSIEIEIAGFETKGDRHLDKSLSAFGSKGAFTKELEGAMLDGRIDLAVHSAKDLPVELPE 75
Query: 94 GLQISAYLPREDIRDVFISHTAQS--LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151
GL + A L R D RDV++S + +++ +V+GT SLRR + + + + D R
Sbjct: 76 GLTVGAVLKRGDSRDVWVSLRREFSIIEECKEKTVVGTGSLRRALQIQQICPGVDIRDIR 135
Query: 152 GKIETRLNKLNNNKAHAILLAYAGIKRL---------------KKEKVIKEILNIEDFPP 196
G + TRL KL++ I+LA AG+KRL +++ EIL+ E F P
Sbjct: 136 GNVPTRLKKLSDGMYDGIILAAAGLKRLGYLSEDCETEGSFEAEEQTFFYEILSKEQFLP 195
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQG I +ET + ++ ++ I+ EDTW ER+FL + G C A A G
Sbjct: 196 AAGQGIIALETRQKD--CEDCMQAIHDEDTWQMFLTERSFLRAIGGGCNEAAAVDVRMDG 253
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ A DG E + G RC I R A
Sbjct: 254 QKVSVRA-RYAGDGLHMKEKTVTGTRCGNIEEDRKLA 289
>gi|254388880|ref|ZP_05004112.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|254393333|ref|ZP_05008481.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294813175|ref|ZP_06771818.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064]
gi|326441528|ref|ZP_08216262.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197702599|gb|EDY48411.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|197706968|gb|EDY52780.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294325774|gb|EFG07417.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064]
Length = 319
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 159/309 (51%), Gaps = 17/309 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + +V ++ + ++ ++T GD I+ L +IGG
Sbjct: 1 MTERALRLGTRRSMLAMAQSGQV---AQEVRRLTGRPVELVEITTYGD-ISREQLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ +
Sbjct: 57 TGVFVAALREALLRGEVDFAVHSLKDLPTGQPDELALAAIPRREDPRDVLVARDGLTFDR 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L + I + RG I+TR+ + + K A++LA AG+
Sbjct: 117 LPDGARVGTGSPRRMAQLNAYARAHGLRIETVPIRGNIDTRIGYVRSGKLDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + ++L+++ P+PGQGA+ IE + + ++ T +V ER+
Sbjct: 177 NRIGRADEVTDVLSVDSVLPAPGQGALAIECAAADADLAATLGALDDPHTRVAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHEVSRNG----NRCDAIN 287
LA L+ C + + A G + + G+V +DG ++S G + DAI
Sbjct: 237 LAALEAGCSAPVGALADLLGDEEVVTEMRLRGVVGTTDGSTLVQLSTTGPVPTSHGDAIA 296
Query: 288 IGRDAAQYI 296
+GR+ A +
Sbjct: 297 LGRELASEM 305
>gi|193638791|ref|XP_001948145.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Acyrthosiphon
pisum]
gi|328705509|ref|XP_003242834.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Acyrthosiphon
pisum]
Length = 377
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 144/260 (55%), Gaps = 14/260 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL S L ++H P I+ ++T GDR+ ++ L +IG K
Sbjct: 5 DRKTIRVGSRKSELALIQTKFVISQLKELH--PEIEFEIVSMTTMGDRVLDKPLPKIGEK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT+++E L+SG +D VHS KD+PT + G I A L R+D RD + L
Sbjct: 63 SLFTKDLEVALLSGTVDFIVHSLKDLPTVMEIGTTIGAILKRDDPRDALVLRDDCKEYQL 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA---------HAI 169
L S IGTSSLRR A L R ++ V D RG + TRL KL+++++ I
Sbjct: 123 DSLPSKSFIGTSSLRRTAQLKRKFPNLQVSDVRGNLNTRLKKLDSSQSTGDNTNTNYSGI 182
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AGI+R+ EK + +I++ + + GQGA+ +E + + E+++ ++H +T
Sbjct: 183 ILALAGIQRMGWEKRVSQIIDSDVMLYAVGQGALAVECRLGDDYILEMLEPLHHYETVLQ 242
Query: 230 VNCERAFLAELDGSCKSAIA 249
V ER FL L G C + +
Sbjct: 243 VVAERGFLTRLGGGCSAPVG 262
>gi|254390668|ref|ZP_05005882.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294812261|ref|ZP_06770904.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064]
gi|326440901|ref|ZP_08215635.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197704369|gb|EDY50181.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294324860|gb|EFG06503.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064]
Length = 311
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 139/274 (50%), Gaps = 6/274 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+E + RI +R SP+ALA R+ L P ++P++T GDR L +GG
Sbjct: 2 VETEVMRIVSRSSPMALAQVERVRAELAVAR--PGVRTEVVPVTTSGDRWMG-DLAALGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG FT+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L
Sbjct: 59 KGAFTKEVDAALLAGEADLAVHCMKDVPADRPLPAGTTFAAFLRRDDIRDALVHPGGLTL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L + IGTSS+RR A L + + RG RL KL A A+LLA +G++R
Sbjct: 119 DELPDGTRIGTSSVRRIAQLASSHPQLECVPMRGNANRRLEKLAAGDADALLLAVSGLER 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + VI E+L+ + P G G + ++ + + + V + T V ER L
Sbjct: 179 IGRTDVISEVLSADVMCPPIGAGVLALQCREEDEETIDAVSGLGDPATHREVTAERMLLH 238
Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGK 271
L G C S IAG+A +G L V DGK
Sbjct: 239 VLQGHCNSPIAGYARAERGGELSLRAKVFTPDGK 272
>gi|207723608|ref|YP_002254006.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum MolK2]
gi|207742664|ref|YP_002259056.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum IPO1609]
gi|206588811|emb|CAQ35773.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum MolK2]
gi|206594058|emb|CAQ60985.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum IPO1609]
Length = 302
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 137/239 (57%), Gaps = 1/239 (0%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P ++ I+ ++T+GD+I +R+L ++GGKGLF +E+E L G D AVHS KD+P +L
Sbjct: 16 PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKELEVALAEGRADLAVHSLKDVPMELPP 75
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
G + A L RED RD F+S+ L L +V+GTSSLRR+A L + + RG
Sbjct: 76 GFALPAILEREDPRDAFVSNQYADLAALPAGAVVGTSSLRREASLRARFPHLVIQPLRGN 135
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
++TRL KL+ AI+LA AG+KRL + I+ ++ + P+ GQGA+ IET +
Sbjct: 136 LDTRLAKLDRGDYAAIILAAAGLKRLGLSERIRAVIASDVSLPAAGQGALGIETRADRTD 195
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGK 271
Q + ++H T +V ERA L GSC+ +A FA + L V + DG+
Sbjct: 196 VQAWLAPLHHLPTALAVTAERAVSRRLGGSCQVPLAAFAHWTDAGALRLRAFVASQDGR 254
>gi|257791816|ref|YP_003182422.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243]
gi|257475713|gb|ACV56033.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243]
Length = 327
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 153/307 (49%), Gaps = 10/307 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L P ++ + + TKGDRI L++IG KGLFT
Sbjct: 4 MRIGTRGSKLALWQAHHVADLLRAAS--PGMDVSVEVVKTKGDRILGVALSKIGDKGLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L G +D VHS KD+PT L +GL ++ L R D RDV ++ + + L S
Sbjct: 62 KELEQALFDGRVDVCVHSMKDVPTALPEGLALAGCLIRADARDVLVAASGTTFAGLPAGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT +LRR + L R D+ ++ RG ++TR+ K+ + A++LA AGI+R+ +
Sbjct: 122 RVGTGALRRLSQLRAVRDDLDYVEVRGNLDTRIAKVRDGALDAVVLAAAGIERMGWSAEV 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E +++ P+ GQGAI +E ++ + + T V ER + LDG C+
Sbjct: 182 AEAFSVDTVVPAVGQGAIGLEVRADDERTARACAQVRCAATDACVAAERHVMRALDGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-----KIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
I +A + L V + DG S+ N DA+ A + R ++
Sbjct: 242 VPIGAYARYEEGLLVLDAFVGSLDGSHVLRSRLSAASQPPNDTDAVEA---AVREARALA 298
Query: 301 NKNVFNF 307
+ V F
Sbjct: 299 QRAVEEF 305
>gi|317507248|ref|ZP_07964994.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974]
gi|316254442|gb|EFV13766.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974]
Length = 309
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 10/305 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A R ++ + + +VI+ +T GDR++ + EIG G+FT
Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRALGE--QAELVIV--NTIGDRVSG-PIVEIG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++ EID AVHS KD+PT + A R D RDV +S + L DL S
Sbjct: 56 SALRDALLADEIDVAVHSLKDLPTAQDPRFSLVAVPERADPRDVLVSRSGSRLADLPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L R+D+ + RG +++R+ K+ + AI++A AG+ RL +E+
Sbjct: 116 AVGTGAPRRSAQLRLARADLEIQPIRGNLDSRMRKVATAECDAIVVARAGLLRLGREQEA 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSC 244
EIL+ P+PGQGA+ +E P + E++ ++HE + + ERA LAEL C
Sbjct: 176 TEILDPAVMLPAPGQGALAVECRSEAPVSLTEVLGRLDHEHSRVTSAAERAVLAELSAGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ A TL V A DG +++ N A +GR A+ +R +
Sbjct: 236 SGPVGALARIDAQTLRVEAAVCALDGSRQIREAQSAQLLNESHAAALGRRVAESLRSMGA 295
Query: 302 KNVFN 306
+
Sbjct: 296 MELVG 300
>gi|261749160|ref|YP_003256845.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497252|gb|ACX83702.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 310
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 144/277 (51%), Gaps = 21/277 (7%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR SPLA++ A E + L H++ + + + ++GD I N L + G+
Sbjct: 3 KIIRIGTRNSPLAISQAIEVQKVL---HRLGYCSHLFF-IKSEGDLIQNIPLYKFKKVGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLA 122
FT + L+SG+ID AVHS KD+PT L + + +SAYL R D+ I ++ L +
Sbjct: 59 FTRNLTDVLLSGKIDMAVHSLKDVPTSLPEKIVLSAYLKRGSFSDLLIYQGSSNFLLNSK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +VI T SLRR+A +++D RG I TRL KL NN + A G++RL
Sbjct: 119 IEAVIATGSLRRRAFWKNRYPHHTIVDLRGNINTRLKKLYNNSWKGAIFAKVGLERLG-- 176
Query: 183 KVIKEILN-IEDFP--------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+LN +E F PSPGQG I + T +N L K ++ +T S N E
Sbjct: 177 -----LLNDLEGFNFKVLDWMIPSPGQGIIVVSTRKDNEWIHYLTKELDDRNTRLSANIE 231
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
R FL L G C + I A K +YF GI+ + DG
Sbjct: 232 RQFLKTLGGGCVTPIGAHAIIKNKIIYFTGILFSLDG 268
>gi|309790863|ref|ZP_07685407.1| porphobilinogen deaminase [Oscillochloris trichoides DG6]
gi|308227150|gb|EFO80834.1| porphobilinogen deaminase [Oscillochloris trichoides DG6]
Length = 353
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 29/309 (9%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LA+ + ++ H + +I STKGDRI + L+ +G KGLF +E
Sbjct: 23 LGTRGSKLAVTQSGMMADAMRAAHAGLEVEMQLI--STKGDRILDVALSAVGDKGLFVKE 80
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---------SL 118
+E+ L+ ++D VHS KD+P+ + GL ++A+ PR D RD + + S+
Sbjct: 81 LEQALLDNQVDFCVHSCKDLPSVVPDGLTLAAFPPRADARDALVVMESAVGDLDLSNFSM 140
Query: 119 KDLAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+D L +V+GTSSLRR + R D+ + D RG ++TRL KL + + AI+LA AG
Sbjct: 141 QDSPLLRQGAVVGTSSLRRACQIRAIRPDLDLRDVRGNVDTRLRKLADGQFEAIILASAG 200
Query: 176 IKRLK---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
+ RL + + + P+ QG + IE + L+
Sbjct: 201 LDRLGFTDATIDGPRHFEAVDARFVALPIPTTQMLPAVSQGILAIECRAADADTISLLGA 260
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
++H + + ERAFLA L+G C+ IA FA +G L G+V + DG G
Sbjct: 261 LDHAPSRAAALAERAFLARLEGGCQVPIAAFAVVEGENLRLRGMVGSLDGTTQVRGELVG 320
Query: 281 NRCDAINIG 289
+ D IG
Sbjct: 321 SLADPAAIG 329
>gi|319760696|ref|YP_004124634.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF]
gi|318039410|gb|ADV33960.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF]
Length = 310
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 139/270 (51%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR S LA+ + + L H P I ++P+ T GD+ N T
Sbjct: 1 MNTKFLRIATRKSRLAICQSEYVCNELKRFH--PNIKIKLVPIVTTGDKFFNSTTKIKIK 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG F +E+E LI D AVHS KDM L L + R D RD F+S ++
Sbjct: 59 KGAFIKELEYALIENRADIAVHSMKDMTASLPNELILPILCKRIDPRDAFVSIKYSNIDM 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S+IGTSSLRR+ + RSD+++ + RG I+TR+ KL+ K AI+LA AG+ RL
Sbjct: 119 LPSGSIIGTSSLRRQCQIQARRSDLTLHNLRGNIDTRIKKLHQGKYDAIILAVAGLNRLH 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IK +N +D P+ GQGAI IE + L+ + H++T + ERA L
Sbjct: 179 LTQYIKTYINPKDLLPAMGQGAIAIECRKKDIDTLSLLSPLYHQETSLRIQSERAVTTYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C+ IA ++ ++ ++ DG
Sbjct: 239 EGYCQFPIASYSEIHNHQIWLRALIGLPDG 268
>gi|297690415|ref|XP_002822614.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Pongo abelii]
gi|297690417|ref|XP_002822615.1| PREDICTED: porphobilinogen deaminase-like isoform 3 [Pongo abelii]
gi|297690419|ref|XP_002822616.1| PREDICTED: porphobilinogen deaminase-like isoform 4 [Pongo abelii]
Length = 344
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 HNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270
>gi|308184042|ref|YP_003928175.1| porphobilinogen deaminase [Helicobacter pylori SJM180]
gi|308059962|gb|ADO01858.1| porphobilinogen deaminase [Helicobacter pylori SJM180]
Length = 306
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 7/289 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I ++ TKGD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANYIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLQRLN 175
Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+
Sbjct: 176 VQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
L+G C+ I A G + ++ +GK + G++ A ++
Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDL 283
>gi|297690413|ref|XP_002822613.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Pongo abelii]
Length = 361
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 HNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|195490377|ref|XP_002093114.1| GE21148 [Drosophila yakuba]
gi|194179215|gb|EDW92826.1| GE21148 [Drosophila yakuba]
Length = 653
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60
++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + +
Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG
Sbjct: 121 IASLPQGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAG 180
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+
Sbjct: 181 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERS 240
Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
FL L G C + +A ++ KG L G V + DG I
Sbjct: 241 FLKTLGGGCSAPVAVWSTLKGEPLNGNSQEVGLSLTGAVWSLDGAI 286
>gi|332208884|ref|XP_003253541.1| PREDICTED: porphobilinogen deaminase, partial [Nomascus leucogenys]
Length = 332
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFRHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|322712674|gb|EFZ04247.1| porphobilinogen deaminase [Metarhizium anisopliae ARSEF 23]
Length = 327
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 147/281 (52%), Gaps = 12/281 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR SPLA+A A +SL + P + I ++T GDR N L GG
Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSI--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----- 115
KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV + A
Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLA 172
++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + + AI+LA
Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178
Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG+ R+ + I + L++++ + GQGA+ +E + +K I H+DT +
Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEHVLRALKEIEHKDTLLAC 238
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
ER+ + EL+G C I L V++ GK
Sbjct: 239 LAERSLMRELEGGCSVPIGVETRWVDGKLRLRATVVSVTGK 279
>gi|297190129|ref|ZP_06907527.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC
25486]
gi|197721156|gb|EDY65064.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC
25486]
Length = 311
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 143/291 (49%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+ + GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGIRTEVVPVKTTGDKWMG-DLSLVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+D+RD I +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPGGLTLDELPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL KL A A+LLA +G++R+ +
Sbjct: 124 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLAAGDADALLLAVSGLERIGRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI + L+ + P G G + ++ + + V + H T V ER FL L G
Sbjct: 184 VITQTLSTDVMCPPIGAGVLALQCREGDSALIDTVSDLGHPGTHREVTAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C S IAG+A + L V + DGK+ R D +G A
Sbjct: 244 CNSPIAGYARSERNGELSLRAKVFSPDGKVILNAHEWAGRLDPATLGTSVA 294
>gi|86141058|ref|ZP_01059617.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217]
gi|85833000|gb|EAQ51449.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217]
Length = 305
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 6/267 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L ++ + +I + + GD I ++ L E+G G+
Sbjct: 3 KTIRIGTRDSELALWQAHTVQDQLENLG----YKTELISVKSTGDLILDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +I+G++D AVHS KD+PT+L G+ A LPR D+F+ ++ D
Sbjct: 59 FTKTLDVAMINGDVDIAVHSMKDVPTQLPNGIVQGAVLPRAATEDIFVFKKDKNATDFTK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRRKA L V+D RG + TRL K+ +N + A AG++R+ +
Sbjct: 119 SVTIATGSLRRKAQWLNKYPKHQVVDLRGNVNTRLQKVADNDWAGAVFAKAGLERINLKP 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E+L+ P+P QGA+ I N+ +E +N D + ER FL +L+G
Sbjct: 179 ENHEVLDW--MIPAPAQGAMVIAVMDNDAFCKEACAKLNDADAALTTKVEREFLRKLEGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C + I A + ++F+G + + DG
Sbjct: 237 CTAPIGAIAKIEDDHIHFHGALFSLDG 263
>gi|228472965|ref|ZP_04057722.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624]
gi|228275547|gb|EEK14324.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624]
Length = 315
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 146/277 (52%), Gaps = 7/277 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RIGTR S LAL A + ++ L + + ++P+ ++GD + L E+G G
Sbjct: 9 KKTLRIGTRDSELALWQAKKVQTLLENFG----YTTSLVPVKSQGDLSLDIPLYEMGITG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV +
Sbjct: 65 VFTKVLDVAMLQGSIDIAVHSMKDVPTSLPKGIVKGAVLTRANVQDVLVYKDGLDFLSQE 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ I T SLRRKA LR V + RG I TRL+KL+ + H + A A ++RL ++
Sbjct: 125 -QATIATGSLRRKAQWLRRYPTHQVENLRGNIATRLHKLHEHSWHGAIFAAAALERLAQD 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + L++E P+P QGAI ++P E + +IN ER FL L+G
Sbjct: 184 HLQR--LSLEWMTPAPAQGAILAVAMDSDPYTLEALSLINDPKADTETQIERRFLKRLEG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
C + I A +G TL F G + + DGK EV ++
Sbjct: 242 GCTAPIGAKATLEGDTLSFVGNLFSLDGKQAVEVRKS 278
>gi|20130425|ref|NP_612103.1| lethal (3) 02640 [Drosophila melanogaster]
gi|7292071|gb|AAF47484.1| lethal (3) 02640 [Drosophila melanogaster]
gi|77403925|gb|ABA81841.1| GH16723p [Drosophila melanogaster]
gi|211938543|gb|ACJ13168.1| FI03834p [Drosophila melanogaster]
gi|220951602|gb|ACL88344.1| l(3)02640-PA [synthetic construct]
Length = 652
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60
++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + +
Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG
Sbjct: 121 IASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAG 180
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+
Sbjct: 181 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERS 240
Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
FL L G C + +A ++ KG L G V + DG I
Sbjct: 241 FLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAI 286
>gi|291528492|emb|CBK94078.1| porphobilinogen deaminase [Eubacterium rectale M104/1]
Length = 338
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 138/277 (49%), Gaps = 32/277 (11%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ IGTR S LAL L + P + + + T GD + L +IG KG+F
Sbjct: 3 YLIGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +
Sbjct: 61 KEIEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------NNN------ 164
VIGT S RRK LL+ R D+ V+ RG I+TRL KL NNN
Sbjct: 121 VIGTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEIADNTVNNNEIANEK 180
Query: 165 -------KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+ I+LA AGIKR+ ++ I + + +D P+P QG + +E +N +
Sbjct: 181 QNKYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAELMAK 240
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
+ ++ E T ER FL + G+C +A AYC
Sbjct: 241 LDALSDEKTNLCAGIEREFLKRIGGNCHLPVA--AYC 275
>gi|332016383|gb|EGI57296.1| Porphobilinogen deaminase [Acromyrmex echinatior]
Length = 358
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 154/273 (56%), Gaps = 7/273 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL L ++H P I+ ++TKGD+I +++L +IG K LFT
Sbjct: 10 IRVGSRKSELALIQTKHVIQCLKEIH--PKKEFEIVTMNTKGDKILDKSLPKIGEKSLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122
EE+E L +G +D VHS KD+PT L G+ + A L RED RD + ++L L
Sbjct: 68 EELELALENGSVDFVVHSLKDLPTILPVGMALGAILKREDPRDAVVMSKKFKDKTLSTLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180
SVIGTSSLRR A LLR + + + RG + TRL KLN N AI+LA AG+KR+
Sbjct: 128 KDSVIGTSSLRRSAQLLRNMPHLKIENIRGNLNTRLKKLNDENGPYAAIILAAAGLKRMG 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++L +E+ + GQGA+ +E ++ K + +++ + + + CER+FL L
Sbjct: 188 WEDKISQLLELEEALYAVGQGALGVECRESDWKIRSILEPLFDLEATLTCVCERSFLKTL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
G C + +A + K + L G V + DG+
Sbjct: 248 GGGCSAPVAVSSSLKKNELTITGAVWSLDGQTL 280
>gi|88854547|ref|ZP_01129214.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1]
gi|88816355|gb|EAR26210.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1]
Length = 290
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 139/257 (54%), Gaps = 4/257 (1%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
IIP+ST+GDR T +L+ IGG+G+F + L++GE D VHS KD+PT + GL I+A
Sbjct: 21 IIPISTQGDRSTE-SLSTIGGQGVFANALRDALLAGECDVVVHSLKDLPTAEVPGLTIAA 79
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
R D RDV + +L+ L + +GT S RR+A L D+ V+D RG I++RL+
Sbjct: 80 VPKRADERDVVCARDGLTLETLPAGARVGTGSPRRQAQLRSLYPDLEVVDLRGNIDSRLD 139
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
K+ + A++LA AG+ R + + E L I +P +PGQGA+ IET K L
Sbjct: 140 KVTDGHLDAVILAAAGLARAGRSDAVTEHLGIAGWPTAPGQGALAIETRTGEEK---LAA 196
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
V++H+ + + ER LA LD C + + A L+ V A DG + S
Sbjct: 197 VLDHKPSRTKTDAERYVLAFLDAGCSAPLGAHAVIDDGLLFLDARVYALDGSRYLTSSHA 256
Query: 280 GNRCDAINIGRDAAQYI 296
D + R+AAQ +
Sbjct: 257 LYVNDVEDPAREAAQRV 273
>gi|332877010|ref|ZP_08444763.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332685118|gb|EGJ57962.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 290
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 146/268 (54%), Gaps = 7/268 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP RIGTR S LAL A ET +++ P I+ + ++GD L E+G G+
Sbjct: 2 KPIRIGTRDSQLALWQA-ETVQYQLELLGYPTE---IVGIKSEGDLELTTPLYEMGVTGI 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L+ GEID AVHS KD+PT L G+ + A L R + D+ + S D +
Sbjct: 58 FTKALDIALLKGEIDIAVHSMKDVPTLLPDGIAVGAVLERGNPHDILVYKGDVSDLDSRV 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ I TSSLRRKA L ++ + RG + TRL KL +N + A AG++R+ +K
Sbjct: 118 -ATIATSSLRRKAQWLHRYPHHTIENLRGNVNTRLQKLADNPWDGAIFAAAGLERI--DK 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ ++ L ++ P+P QGAI + H +N Q ++ I+ T+ ERAFL L+G
Sbjct: 175 LPEDYLVLDWMLPAPAQGAIMVLAHEDNVDLQGILLKIHDGKTYIETQVERAFLRALEGG 234
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C + I +A G ++F G + + DGK
Sbjct: 235 CTAPIGAYAEFDGEQVHFKGGLWSEDGK 262
>gi|195336557|ref|XP_002034902.1| GM14404 [Drosophila sechellia]
gi|194127995|gb|EDW50038.1| GM14404 [Drosophila sechellia]
Length = 651
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60
++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + +
Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG
Sbjct: 121 IASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAG 180
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+
Sbjct: 181 LLRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERS 240
Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
FL L G C + +A ++ KG L G V + DG I
Sbjct: 241 FLKTLGGGCSAPVAVWSNLKGEPLNQNSQELGLSLTGAVWSLDGAI 286
>gi|195586907|ref|XP_002083209.1| GD13613 [Drosophila simulans]
gi|194195218|gb|EDX08794.1| GD13613 [Drosophila simulans]
Length = 651
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60
++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + +
Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG
Sbjct: 121 IASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAG 180
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+
Sbjct: 181 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERS 240
Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
FL L G C + +A ++ KG L G V + DG I
Sbjct: 241 FLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAI 286
>gi|89889812|ref|ZP_01201323.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7]
gi|89518085|gb|EAS20741.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7]
Length = 317
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 148/271 (54%), Gaps = 13/271 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A +S L + + P+ ++GD + L E+G G+FT
Sbjct: 5 IRIGTRDSQLAMWQATTVQSQLNAL----GFQTELAPVKSQGDLNLDEPLYEMGITGIFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ ++ L+ G+ID AVHS KD+PT+L KG+ +A L R +D+ + ++ + D A+
Sbjct: 61 KTLDVALVKGDIDIAVHSLKDVPTQLPKGMVQAAVLERASQKDILVYKSSFN-PDEAM-- 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKKEKV 184
I T SLRRKA L + V+D RG + TRL+KL++NK +A + A AG+ R+
Sbjct: 118 TIATGSLRRKAQWLNMYAQHHVVDLRGNVNTRLSKLHSNKDWNAAIFAKAGLDRIGLLSQ 177
Query: 185 IK-----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ E +++ F P+P QGAI I +N E V +NH T V+ ER FL E
Sbjct: 178 LRGNYGFEYSDLDSFVPAPAQGAIMIAAMGHNTAVLEAVSQLNHAQTQRCVDIERRFLRE 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+G C + I A + + F G +L+ DG
Sbjct: 238 LEGGCTAPIGAIAQVHDNKIDFTGCLLSIDG 268
>gi|307611613|emb|CBX01297.1| porphobilinogen deaminase HemC [Legionella pneumophila 130b]
Length = 284
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 141/256 (55%), Gaps = 5/256 (1%)
Query: 28 MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDM 87
M V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDM
Sbjct: 1 MLVKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDM 60
Query: 88 PTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISV 147
P +L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ +
Sbjct: 61 PAQLPDGLSLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQI 120
Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207
RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE
Sbjct: 121 KTLRGNIHTRLSKLESGEYQAIILAAAGLERMGLTHHITQLIPDDIMLPTCAQGALCIEC 180
Query: 208 HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST---LYFYGI 264
++ + QEL+ +N + V+ ER A+L G+C A YC + L
Sbjct: 181 RTDDLEIQELIHSLNDPISALCVHTERRVNAKLGGNCHIPFA--VYCTITAENLLLLRAK 238
Query: 265 VLASDGKIFHEVSRNG 280
VL DG + + G
Sbjct: 239 VLNLDGSQMIDDEQQG 254
>gi|282865645|ref|ZP_06274696.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
gi|282559689|gb|EFB65240.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
Length = 328
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP R+GTR S LA+A + + V ++ + ++ ++T GD ++ L +IGG G+
Sbjct: 13 KPLRLGTRRSKLAMAQSGMVADA---VREVTGRAVELVEITTYGD-VSREHLAQIGGTGV 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + + L GE+D AVHS KD+PT +GL ++A RED RDV ++ + L
Sbjct: 69 FVAALREALARGEVDFAVHSLKDLPTTQPEGLVLAAVPVREDPRDVLVARDGLTFAQLPS 128
Query: 124 HSVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ IGT S RR A L + RS D+ + RG ++TR+N + + A++LA AG+ RL
Sbjct: 129 GARIGTGSPRRMAQLNAYARSHGLDMETVAIRGNVDTRINFVRTGELDAVVLAAAGLSRL 188
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + L+ + P+PGQGA+ IE ++ + + ++ T +V ERA LA
Sbjct: 189 GRTGEVTDFLSTDTVLPAPGQGALAIECAEDSTELAAALAELDDPHTRVAVTAERALLAA 248
Query: 240 LDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290
L+ C + + A G + L G+V ++DG ++S G + DA GR
Sbjct: 249 LEAGCSAPVGALADLLADGQIVNELRLRGVVGSTDGTSLVQLSITGSVPTSHDDAAAFGR 308
Query: 291 DAAQYI 296
+ A +
Sbjct: 309 ELASEM 314
>gi|326329564|ref|ZP_08195886.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1]
gi|325952560|gb|EGD44578.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1]
Length = 336
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 163/302 (53%), Gaps = 14/302 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLM-DVHKIPPHNIVIIPLSTKGDRI--TNRTLTEIGG 60
+ R+GTR S LA+ T+S+L+ ++ + H + ++ + + GDR +N LT
Sbjct: 2 RTLRLGTRRSQLAV-----TQSTLVAEMLRAQGHIVELVEIVSDGDRTQASNTPLTSANS 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L + EID AVHS KD+PT +G+++ A LPRED RDV ++ +L +
Sbjct: 57 TGVFVSALRDALHAKEIDLAVHSLKDLPTYPEEGIELVAILPREDPRDVIVARDGLTLGE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GT S RR A + + + RG ++TR+ K+ + + A++LA AG+ R+
Sbjct: 117 LPPGSRVGTGSPRRVAQIKALGLGLELAGIRGNVDTRIGKVRSGEFDAVVLARAGLARID 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA--QELVKVINHEDTWDSVNCERAFLA 238
+ + E+L+ P+PGQGA+ +E + A ++++ ++ T +V ERA LA
Sbjct: 177 RLDEVTEVLDPIQVLPAPGQGALAVECREGDADADVRKILTSLDDAPTRAAVEAERAVLA 236
Query: 239 ELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L+G C + I A +G L+ + L+ DG + +S +G DA +GR A+
Sbjct: 237 TLEGGCAAPIGTLADVVEGEEGPELWVRAVALSLDGSLSVRLSASGPLDDAAGVGRRLAE 296
Query: 295 YI 296
+
Sbjct: 297 EM 298
>gi|296216375|ref|XP_002754553.1| PREDICTED: porphobilinogen deaminase [Callithrix jacchus]
Length = 361
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL L+
Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|262067556|ref|ZP_06027168.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC
33693]
gi|291378731|gb|EFE86249.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC
33693]
Length = 302
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 144/271 (53%), Gaps = 6/271 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK +G+R S LALA A +++L + P + I + T GD+ +N +++
Sbjct: 2 KKNIIMGSRGSILALAQANLVKNNLEANY--PELSFEIKEIVTSGDKDLKSNWENSDVSL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAVSPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPKGAKIGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
DG C + + ++ G + F V + +GK
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGK 268
>gi|260494552|ref|ZP_05814682.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33]
gi|260197714|gb|EEW95231.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33]
Length = 302
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 137/264 (51%), Gaps = 5/264 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ +N +++
Sbjct: 2 KKNIIIGSRGSILALAQADFIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDVSL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE+ L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQGLLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKIGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F
Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDKEIKEILKTIHNENVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI 264
DG C + + ++ G + F +
Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTAV 262
>gi|20149500|ref|NP_000181.2| porphobilinogen deaminase isoform 1 [Homo sapiens]
gi|1170217|sp|P08397|HEM3_HUMAN RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|12653497|gb|AAH00520.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|14198180|gb|AAH08149.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|17939638|gb|AAH19323.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|119587851|gb|EAW67447.1| hydroxymethylbilane synthase, isoform CRA_a [Homo sapiens]
gi|158261573|dbj|BAF82964.1| unnamed protein product [Homo sapiens]
gi|312152370|gb|ADQ32697.1| hydroxymethylbilane synthase [synthetic construct]
Length = 361
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|208435725|pdb|3ECR|A Chain A, Structure Of Human Porphobilinogen Deaminase
gi|208435726|pdb|3ECR|B Chain B, Structure Of Human Porphobilinogen Deaminase
Length = 364
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 24 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 81
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 82 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 141
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 142 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 201
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 202 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 261
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 262 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 290
>gi|312375045|gb|EFR22490.1| hypothetical protein AND_15185 [Anopheles darlingi]
Length = 638
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 144/253 (56%), Gaps = 9/253 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII-PLSTKGDRITNRTLTEIGGK 61
KK R+G+R S LAL +T+ + + K+ P + I ++T GDR+ N++L +IG K
Sbjct: 10 KKTIRVGSRKSELALT---QTKHVIARLQKLNPDVVYEIHTMTTVGDRVLNKSLPKIGEK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + H +L
Sbjct: 67 SLFTKDLEDALRTGGVDFVVHSLKDLPTALPVGMAIGAVLEREDPRDALVLNERHRGSTL 126
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
L S+IGTSSLRR A L R+ ++V D RG + TRL KL+ + K I+LA AG+
Sbjct: 127 ASLPRGSLIGTSSLRRSAQLARYYRHLNVCDIRGNLNTRLAKLDADASKFAGIILAQAGL 186
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + I +++ + + GQGA+ +E N+ ++ + H +T + ER+F
Sbjct: 187 VRMGWNERIDQVIEPSEILYAVGQGALAVECRSNDEYILGMLAKLCHLETQCRILTERSF 246
Query: 237 LAELDGSCKSAIA 249
L L G C + +A
Sbjct: 247 LRTLGGGCSAPVA 259
>gi|297563292|ref|YP_003682266.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847740|gb|ADH69760.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 335
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 152/304 (50%), Gaps = 19/304 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL---STKGDRITNRTLTEIGGK 61
P R+GTR S +A T S M I +I L ++ GD +T LT++GG
Sbjct: 20 PARLGTRRSTMA------TSQSRMVADAITARTGRVIELELITSFGD-VTKAHLTQLGGT 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + +L +G +D AVHS KD+PT +GL ++A R+D RD + DL
Sbjct: 73 GVFVNALRDELHAGTVDFAVHSLKDLPTTPAEGLVLAAIPERDDPRDALCARDGLKFADL 132
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ +
Sbjct: 133 PAGARIGTGSPRRVAQLAALRPDLVYVPIRGNAETRLGKVASGELDAVVLAYAGLGRVGR 192
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ-ELVKVINHEDTWDSVNCERAFLAEL 240
+ + E+ E P+PGQGA+ +E V + ++H T V ER L+EL
Sbjct: 193 TEDVTEVFEPEQMLPAPGQGALAVECSVERLDGDLAYLASVDHPATRAEVVAERTVLSEL 252
Query: 241 DGSCKSAIAGFAYCKGST--LYFYGIVLASDG------KIFHEVSRNGNRCDAINIGRDA 292
+ C + + +A T L V+A+DG + +++ G+ A +GRD
Sbjct: 253 EAGCAAPVGAYAQYDAETGRLRLRAAVVATDGAEAVRRERAADLASPGDLAAATALGRDL 312
Query: 293 AQYI 296
A+ +
Sbjct: 313 ARQM 316
>gi|254303623|ref|ZP_04970981.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323815|gb|EDK89065.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 301
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 140/271 (51%), Gaps = 6/271 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L P I + T GD+ +N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLVKEKLE--LNYPNLTFEIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
DG C + + ++ G + F V + +GK
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGK 268
>gi|35307|emb|CAA27801.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270
>gi|294782423|ref|ZP_06747749.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA]
gi|294481064|gb|EFG28839.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA]
Length = 301
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 140/271 (51%), Gaps = 6/271 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IGTR S LALA A ++SL + P I + T GD+ +N +
Sbjct: 2 KKNIIIGTRGSILALAQANLVKTSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNASL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L
Sbjct: 60 KSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + + ++K I++E+ V ER F
Sbjct: 179 MADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNENIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
DG C + + ++ + F G + DGK
Sbjct: 239 DGGCHTPMGCYSQVDEDKIKFIG-AYSHDGK 268
>gi|66933009|ref|NP_001019553.1| porphobilinogen deaminase isoform 2 [Homo sapiens]
Length = 344
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270
>gi|332668763|ref|YP_004451770.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484]
gi|332337800|gb|AEE44383.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484]
Length = 326
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 140/277 (50%), Gaps = 16/277 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL +L + I + + T GDR+T +L +GG G+F
Sbjct: 5 VRIGTRASTLALTQTGHVADALAAHGGL---AIETVRVRTDGDRLTG-SLASLGGAGVFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L+ G D AVHS KD+PT GL ++A PRED RD + +L DL +
Sbjct: 61 TALRDALLDGRCDVAVHSLKDLPTADAPGLVLAAVPPREDPRDALCARDGLTLADLPRGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-----HAILLAYAGIKRLK 180
+GT S RR A LL R D+ V+D RG ++TRL ++ + A++LA AG+ R+
Sbjct: 121 RVGTGSPRRAAQLLAARPDLDVVDIRGNVDTRLGRVAGSPTGPGDLDAVVLARAGLARIG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETH---VNNPKAQEL---VKVINHEDTWDSVNCER 234
+ + + E+ + P+PGQGA+ +ET + A L + ++ T +V ER
Sbjct: 181 RLEAVTELFGPDVMLPAPGQGALAVETRAAGLTTDLAGPLHAALAALDDRPTRLAVLAER 240
Query: 235 AFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDG 270
A LA L+ C + + A TL +V+ +DG
Sbjct: 241 ALLARLEAGCAAPVGTLATLDADGTLTLDAVVVRTDG 277
>gi|148222555|ref|NP_001089699.1| hydroxymethylbilane synthase [Xenopus laevis]
gi|76780331|gb|AAI06358.1| MGC130905 protein [Xenopus laevis]
Length = 351
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 142/273 (52%), Gaps = 8/273 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+GTR S LA +T S + M + + I+ +ST GD+I + L++IG K
Sbjct: 8 KHVIRVGTRKSQLA---RIQTDSVVEMLSKRFSSTHFEIVAMSTTGDKILDTALSKIGEK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +L
Sbjct: 65 SLFTKELENALEKNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRFGNTL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIK 177
L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++
Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLRKLDEQEDFSAIILAAAGLR 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I +IL ++ + GQGA+ +E + +V + +T ERAF+
Sbjct: 185 RMGWENRIGQILTSDECLYAVGQGALAVEVRAKDQDILSMVSALQDPETVLRCVAERAFM 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+L+G C +A K S LY G V + DG
Sbjct: 245 KKLEGGCSVPVAVSTVVKDSQLYLTGAVYSLDG 277
>gi|254431329|ref|ZP_05045032.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001]
gi|197625782|gb|EDY38341.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001]
Length = 321
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 150/304 (49%), Gaps = 9/304 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H I I ++T+GD+I + L +IG
Sbjct: 1 MAGSTLRIASRRSQLAMVQTHWVRDELAKAHD--DLTITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H K
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHAKHRDKT 118
Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
LA SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDEPVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
EL+G C+ I G+ L G+V + DG+ G + D IG A
Sbjct: 239 RELEGGCQVPIGVNTRFDGAGESGELVLTGMVASLDGQRLIRDEARGPQDDPEAIGIALA 298
Query: 294 QYIR 297
+ +R
Sbjct: 299 RSLR 302
>gi|237744690|ref|ZP_04575171.1| porphobilinogen deaminase [Fusobacterium sp. 7_1]
gi|229431919|gb|EEO42131.1| porphobilinogen deaminase [Fusobacterium sp. 7_1]
Length = 302
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 143/276 (51%), Gaps = 6/276 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ +N +++
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDVSL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F
Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNENIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276
DG C + + ++ G + F V + +GK V
Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTA-VYSDEGKQIRAV 273
>gi|296108387|ref|YP_003620088.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy]
gi|295650289|gb|ADG26136.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy]
Length = 284
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 143/261 (54%), Gaps = 5/261 (1%)
Query: 28 MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDM 87
M V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDM
Sbjct: 1 MLVKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDM 60
Query: 88 PTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISV 147
P +L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ +
Sbjct: 61 PAQLPDGLLLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQI 120
Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207
RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE
Sbjct: 121 KTLRGNIHTRLSKLESGEYQAIILAAAGLERMGLAHHITQLIPDDIMLPTCAQGALCIEC 180
Query: 208 HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC---KGSTLYFYGI 264
++ + QEL+ +N + V+ ER A+L G+C A YC + L
Sbjct: 181 RTDDLEIQELIHGLNDPISALCVHTERRVNAKLGGNCHIPFA--VYCTITEEKRLLLRAK 238
Query: 265 VLASDGKIFHEVSRNGNRCDA 285
VL DG + + G +A
Sbjct: 239 VLNMDGSQMIDDEQQGKIAEA 259
>gi|171914695|ref|ZP_02930165.1| Hydroxymethylbilane synthase [Verrucomicrobium spinosum DSM 4136]
Length = 318
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 142/270 (52%), Gaps = 18/270 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-----G 60
R+GTR S LAL A ++L H P + ++T GD+ + +E
Sbjct: 9 LRLGTRGSELALRQAEMVEAALHAAH--PYLRVERKVIATTGDKRPDLRFSEFTEGDRLD 66
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+FT+E+E L SGEID AVHS KD+PT L + I+ LPR I DV IS +L
Sbjct: 67 KGIFTKELEIALASGEIDIAVHSLKDVPTVLDEKFFIAGVLPRAPIEDVLISREGYTLAT 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179
L + +GTSS+RR L + ++ RG + TR+ KL + AILLA AG++RL
Sbjct: 127 LPAGAKVGTSSVRRIRQLQWLNPGVECVEIRGNVPTRIRKLFAPSDLDAILLARAGLERL 186
Query: 180 K---KEKVIKE-------ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
E V+ + IL+ E+F P+ GQGAI IE V++ E +K INHE+T+
Sbjct: 187 SLLDGEHVVVDGQPLHAVILDCEEFLPAAGQGAIGIEARVDDAHTLEFLKAINHEETYAR 246
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTL 259
V ER FL L C++ I + + L
Sbjct: 247 VTAEREFLHILKAGCQTPIGAHTFLENGVL 276
>gi|54020779|ref|NP_001005635.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis]
gi|49250823|gb|AAH74624.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis]
Length = 351
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 142/273 (52%), Gaps = 8/273 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+GTR S LA +T S + M + P + I+ +ST GD+I + L++IG K
Sbjct: 8 KHVIRVGTRKSQLA---RIQTDSVVEMLSKRFPSTHFDIVAMSTTGDKILDTALSKIGEK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +L
Sbjct: 65 SLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRYGNTL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIK 177
L SVIGTSSLRR A L + + D RG + TR+ KL+ + AI+LA AG++
Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAAAGLR 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + I +IL ++ + GQGA+ IE + +V + +T ERAF+
Sbjct: 185 RMGWKNRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAERAFM 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+G C +A K S LY G V + DG
Sbjct: 245 KRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDG 277
>gi|308177931|ref|YP_003917337.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117]
gi|307745394|emb|CBT76366.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117]
Length = 324
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 147/318 (46%), Gaps = 31/318 (9%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ FR+GTR S LA L + + +++ T+GD +T +L +GG G
Sbjct: 2 SESFRVGTRGSALATTQTGWAAQKLAGISGLDVETVLV---KTEGDVVTG-SLATLGGTG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + L+ D AVHS KD+PT +GL ++A RED+RD S + L L
Sbjct: 58 VFAAALRQHLLDAGCDLAVHSLKDLPTAQPEGLVLAAIPAREDVRDALCSRDSLGLDQLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------NNNKAH 167
+ IGT S RR A LL +RSD ++D RG + TRL ++
Sbjct: 118 HGAKIGTGSPRRAAQLLAYRSDFEIVDIRGNVPTRLGRVKGVGKTLDDGSVGRSTQGDLD 177
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED-- 225
A++LA AG++RL E I E L+ P+PGQGA+ +ET Q L ++ D
Sbjct: 178 AVILAAAGMRRLGLEDHITEYLDPSIMLPAPGQGALALETRSAGSGHQALDAALSQFDDA 237
Query: 226 -TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR-- 282
T V ERA L+ L+ C + I A+ G L + DG E R R
Sbjct: 238 HTRMQVEAERALLSTLEAGCAAPIGALAHIDGDDLVLEAVACNPDGS---ETMRRSARIA 294
Query: 283 CD----AINIGRDAAQYI 296
C A +GR AQ +
Sbjct: 295 CSTTDAAQQLGRSLAQSM 312
>gi|120401860|ref|YP_951689.1| porphobilinogen deaminase [Mycobacterium vanbaalenii PYR-1]
gi|158513128|sp|A1T3D3|HEM3_MYCVP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119954678|gb|ABM11683.1| hydroxymethylbilane synthase [Mycobacterium vanbaalenii PYR-1]
Length = 312
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 142/275 (51%), Gaps = 13/275 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GD+ + + EIG G+FT
Sbjct: 2 IRIGTRGSLLATTQAGTVRDALIAAG----HDAELVIVSTEGDQRADAPIAEIG-VGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A RED RD ++ L +L S
Sbjct: 57 AALREAIADGLVDAAVHSYKDLPTAPDPRFMIAATPVREDARDALVARDGLVLGELPAGS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +
Sbjct: 117 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVARAGLARIGRLDAV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + +++ ++ DT ++ ER LAEL+ C
Sbjct: 177 TEALEPVQMLPAPAQGALAVECRAGDTALAQVLSQLDDADTRAAITAERTLLAELEAGCS 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + DG++F E+S G
Sbjct: 237 APVGAIAEVVES--------IDEDGRVFEELSLRG 263
>gi|288932129|ref|YP_003436189.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642]
gi|288894377|gb|ADC65914.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642]
Length = 292
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 154/294 (52%), Gaps = 13/294 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LALA A + + L + + + + T GD + ++ L E G G F
Sbjct: 7 IGSRGSKLALAQAEKVKKLLEE----RDFEVEVKVIKTHGDIMKDKPLHEFKGMGAFVRA 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I++ L GEID AVHS KD+P++ ++G I+A L RE D FIS +++ + S I
Sbjct: 63 IDEALKRGEIDLAVHSYKDVPSQRVEGTVIAAVLERESACDAFISREGLKFEEMPVASKI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK- 186
GTSSLRR+A + + R D+ V + RG ++TRL KL I++A AG+ RL +K I+
Sbjct: 123 GTSSLRRRAFVKKLRKDLEVENLRGNLDTRLRKLREGFYDGIIVAEAGLIRLGLDKEIEY 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E LN E F PS QG I + + N EL +NHE T + ERA L EL C
Sbjct: 183 ERLNPEVFVPSANQGVIAVASRENEA---ELFSFLNHEKTRLETDVERAVLRELGIGCAI 239
Query: 247 AIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNGNRCDAINIGRDAAQYI 296
+A +G I L+ +G ++ ++S+ +A+ I ++ +I
Sbjct: 240 PAGIYAKAEGKVRLIVEI-LSEEGEKSVRVDEKLSKENAVEEAVEIAKNLKSFI 292
>gi|9971935|gb|AAG10497.1|AF279106_59 predicted porphobilinogen deaminase [uncultured marine gamma
proteobacterium EBAC31A08]
Length = 303
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 146/272 (53%), Gaps = 6/272 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ A L+ KI + ++P++++GD+ T++ L EIGGKGLF
Sbjct: 3 IRIATRQSELAMYQAKFVADELL--AKINNIKVELVPMTSEGDQ-TDKPLHEIGGKGLFI 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E L + E D AVHS KD+P KL +I + RE D+ +S +S + A +S
Sbjct: 60 STLESSLEADEADIAVHSLKDVPAKLDPKFKIISVFSRESPEDLLLSKDGKSFSEFARNS 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTS RRKA + R DI I RG I TR+ KLN+ +++A A IKRL ++
Sbjct: 120 TIGTSGPRRKAQINNLRPDIKTIPVRGNIATRIKKLNDGLFDGLVVAKAAIKRLGLKQNS 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E +IE+ PS QG I IE + EL++ I + ER+F+A ++G+C
Sbjct: 180 YE-FSIEEMLPSASQGYIAIECLSDKKDIIELLENIGDPKELILASAERSFVAAMEGTCL 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG--KIFHE 275
S IA K + G +L+ +G KI+ E
Sbjct: 239 SPIAILCEDKNGQIKISGKILSYEGNEKIYKE 270
>gi|34762659|ref|ZP_00143651.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887680|gb|EAA24757.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 302
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 138/266 (51%), Gaps = 5/266 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ +N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL 266
DG C + + ++ G + F + L
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYL 264
>gi|163784391|ref|ZP_02179282.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880338|gb|EDP73951.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 185
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 115/185 (62%), Gaps = 2/185 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L P + +I ++TKGD+I + L ++GGKGLF
Sbjct: 3 IRIGTRKSKLALWQANFVAEQLK--KHFPELEVELIKITTKGDKILDVPLAKVGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S SLK+L +
Sbjct: 61 KEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITKREDPRDAFLSVKYSSLKELPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRK L R D+ + D RG ++TR+ KL + A++LAYAG+KRL E +
Sbjct: 121 VVGTSSLRRKVQLKINRPDLQIKDLRGNVDTRIRKLEEGQYDAVILAYAGLKRLGLEDKV 180
Query: 186 KEILN 190
K++ +
Sbjct: 181 KQVFS 185
>gi|227508197|ref|ZP_03938246.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227192426|gb|EEI72493.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 303
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 143/279 (51%), Gaps = 4/279 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F +GTR S LA+ +L + + P + ++T+GDR +L +IGGKG
Sbjct: 2 KPEFVVGTRQSKLAMRQTNLVVDALKE--RFPKIIFKVEKITTQGDRNRKDSLRKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121
+F +EIE++L ID AVHS KD+ L K L I R+ D IS S + L
Sbjct: 60 IFVKEIEQRLTDKRIDFAVHSLKDVMPSLPKNLIIGGVPKRDSPFDCLISTKPFSDIDQL 119
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSS RR+ R D+ ++ RG +++R+ KL + I+LA AG+ RL
Sbjct: 120 PKGARIGTSSSRRQGQFSHLRPDVEIVSIRGNVDSRIQKLQRDHLDGIILAEAGLNRLGV 179
Query: 182 EKVIKEILNIE-DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ L+++ D P+ GQGAI IE ++ L+K I DT SV ER FL L
Sbjct: 180 DLTGLYRLSLKNDLLPAAGQGAIGIECRADDHDTLALLKQIEDADTRQSVTIERDFLRRL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
GSC I FA + F G+V + DGKIF S+
Sbjct: 240 GGSCNFPIGAFASQTSMGVRFDGLVASIDGKIFFSKSKT 278
>gi|73955044|ref|XP_546491.2| PREDICTED: similar to Porphobilinogen deaminase
(Hydroxymethylbilane synthase) (HMBS)
(Pre-uroporphyrinogen synthase) (PBG-D) [Canis
familiaris]
Length = 361
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|15678894|ref|NP_276011.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|11386772|sp|O26960|HEM3_METTH RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|2621967|gb|AAB85372.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 289
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 138/250 (55%), Gaps = 3/250 (1%)
Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106
GDRI + L + +GLFT E++ +++ E+D AVHS KD+P+ L L I+A PRE
Sbjct: 39 GDRIRDSQLYSMDSRGLFTRELDMAVLNEEVDLAVHSLKDVPSDLDPDLAIAAVPPRESP 98
Query: 107 RDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
+V +S +DL S +GTSSLRR+A + + + RG I+TR+ K+ + +
Sbjct: 99 AEVLVSRL--DWEDLPQGSKLGTSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMDGEV 156
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
HA ++A AG+KRL E+ IK +E F P+ GQGA+ + T ++ + + I H +
Sbjct: 157 HATIMAEAGLKRLGLEEHIKRRFPVEYFTPAAGQGALAVITRADSELISSIGR-ITHHPS 215
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
V E+ L EL C+ + G+ L Y ++L +G++ +V+ G +A
Sbjct: 216 LQEVTAEKTLLRELGAGCQCPLGVIGRATGNQLTLYAVLLTREGEMLRKVTVRGPLAEAE 275
Query: 287 NIGRDAAQYI 296
+IG+ AA+ +
Sbjct: 276 DIGKKAAKEM 285
>gi|320010120|gb|ADW04970.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331]
Length = 328
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 17/302 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + V ++ + ++ ++T GD I+ L +IGG G+F
Sbjct: 14 PLRLGTRRSKLAMAQSGMVADA---VREVTGRAVELVEITTYGD-ISREHLAQIGGTGVF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+SGE+D AVHS KD+PT +GL ++A PRED RD ++ + L
Sbjct: 70 VAALREALLSGEVDFAVHSLKDLPTTQPEGLVLAAVPPREDPRDALVARDGLTFGQLPAG 129
Query: 125 SVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR A L + RS DI + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 130 ARIGTGSPRRMAQLNAYARSHGLDIETVAIRGNVDTRIGFVRSGELDAVVLAAAGLSRLG 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + + L ++ P+PGQGA+ +E ++ + ++ T +V ERA L L
Sbjct: 190 RTDEVTDFLPVDTVLPAPGQGALAVECAESSADLAAALAELDDPYTRIAVTAERALLNAL 249
Query: 241 DGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRD 291
+ C + + A +G L G+V ++DG ++S G + DA +GR+
Sbjct: 250 EAGCSAPVGALADLLAEGQVVNELRLRGVVGSTDGTSLVQLSITGPVPTSHDDAAALGRE 309
Query: 292 AA 293
A
Sbjct: 310 LA 311
>gi|33861052|ref|NP_892613.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|39931394|sp|Q7V2I1|HEM3_PROMP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33639784|emb|CAE18954.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 316
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTKFKLKIASRRSKLAMVQTLWVKEQLE--KNIPDLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117
KGLFT+E+E +++ G D AVHS KD+PT L GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPDGLTLGCITKREDPSDALVVNKKNKIYQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TR+ KL++ + I+LA AG+K
Sbjct: 119 LESLPPGSIVGTSSLRRLAQLRYKFPHLDFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--ERA 235
RL E + +I+ E + GQGA+ IE ++ + +++ V+ ED S C ER+
Sbjct: 179 RLGFESRVHQIIPNEISLHAVGQGALGIECKSDDKEVLKIISVL--EDKVSSQRCLAERS 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
FL EL+G C+ I + + + G+V + DGK + GN +G+ A+
Sbjct: 237 FLRELEGGCQVPIGVNSSIQNDEIALIGMVASIDGKRLIKNESIGNIKYPEEVGKKLAEK 296
Query: 296 IRF 298
++
Sbjct: 297 LKL 299
>gi|303239240|ref|ZP_07325769.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2]
gi|302593285|gb|EFL63004.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2]
Length = 293
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 155/296 (52%), Gaps = 13/296 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI--VIIPLSTKGDRITNRTLTEIGGK 61
K R+G+R S LA+ + +MD K NI +I + T GD+I + TL +IGGK
Sbjct: 2 KTIRVGSRDSKLAIIQS----QMVMDAIKSYDSNIKTELITMKTTGDKILDVTLDKIGGK 57
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+++ LI+GE+D VHS KDMP ++ + L + A RED RDV I Q+ D
Sbjct: 58 GLFVKELDEALINGEVDITVHSYKDMPMQIDEDLPVVALSTREDERDVLILPKGQTFSD- 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+G SS RR + L+ ++ RG + TRL KL++ + AI+LA AGIKRL
Sbjct: 117 ---KPVGCSSERR-TMQLKELGFENIKPLRGNVITRLKKLDDGEYSAIVLAAAGIKRLGL 172
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I +++ P+ QG I ++ + ++ + + ERAF+ L+
Sbjct: 173 EERISRYFTVDEIMPAACQGIIAVQARKGEDTS--YLRCFHSYASQVISEAERAFITALN 230
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
G C S +A +AY L G+ + + KI S++G A +G + A ++
Sbjct: 231 GGCSSPVAAYAYLDKDILVLNGLYVDKENKIAVRGSQHGTPAQAAVLGEELANRLK 286
>gi|292385|gb|AAA60030.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 344
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R+
Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270
>gi|208434184|ref|YP_002265850.1| porphobilinogen deaminase [Helicobacter pylori G27]
gi|226706288|sp|B5ZA04|HEM3_HELPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|208432113|gb|ACI26984.1| porphobilinogen deaminase [Helicobacter pylori G27]
Length = 306
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 151/285 (52%), Gaps = 5/285 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLEREFVKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
I A G + ++ +GK + G++ A ++ +D
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQD 286
>gi|292386|gb|AAA60029.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 361
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|297201478|ref|ZP_06918875.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
gi|197716811|gb|EDY60845.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
Length = 319
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 23/309 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K R+GTR S LALA + ++ V P + ++ ++T GD ++ L +IGG
Sbjct: 1 MSTKALRLGTRRSKLALAQSGRVAEAVSQVTGRP---VELVEITTYGD-VSKEALAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A D
Sbjct: 57 TGVFVTALREALLKGEVDFAVHSLKDLPTGQPDELVLAALPEREDPRDVIVARDALKFTD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L + DI + RG I+TR+ + + + A++LA AG+
Sbjct: 117 LPPGARIGTGSPRRTAQLNAYARAHGLDIETVAIRGNIDTRMRFVRDGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWDSVNCE 233
+R+ + + + L+++ P+PGQGA+ IE +N +L+ + D T +V E
Sbjct: 177 QRIGRIDEVTDFLSVDTVLPAPGQGALAIECTADN---ADLIAALGELDDPFTRVAVTAE 233
Query: 234 RAFLAELDGSCKSAIAGFA--YCKGS---TLYFYGIVLASDGKIFHEVSRNGNRCD---- 284
R+ LA L+ C + + A G + G+V +DG ++S G +
Sbjct: 234 RSLLAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSRMVQLSTTGPVPETYDQ 293
Query: 285 AINIGRDAA 293
A+ +GR+ A
Sbjct: 294 AMALGRELA 302
>gi|295317401|ref|NP_001171280.1| porphobilinogen deaminase isoform 2a [Felis catus]
gi|289191083|gb|ADC93654.1| hydroxymethylbilane synthase erythroid form 2a [Felis catus]
gi|289191085|gb|ADC93655.1| hydroxymethylbilane synthase erythroid form 2b [Felis catus]
Length = 344
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270
>gi|288561002|ref|YP_003424488.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1]
gi|288543712|gb|ADC47596.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1]
Length = 289
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 10/293 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL R L ++ +I TKGD+ITN L + KGLFT E
Sbjct: 3 VGTRGSKLALVQTDYIRQCLYNITGEEVEKNII---KTKGDKITNSQLYNMDSKGLFTRE 59
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ L+ E+D AVHS KD+PT+L + L+I A RE +V IS+ + S +L S +
Sbjct: 60 LDNALLDEEVDFAVHSLKDVPTELNEDLEIVAVPIRESPNEVLISNYSWS--ELEEGSTL 117
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A D + RG +ETR+ K+ + + A ++A AG+ RL +K IK
Sbjct: 118 GTSSLRREAFCKHHNKDFELKPIRGNVETRIEKVMDGQVDATIMAEAGLNRLGLQKYIKA 177
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ P+ GQGA+ + T + + +E ++ +NH + V E+ L E+ C+
Sbjct: 178 KFPTDYIMPAAGQGALAVMTR-KDSEHKETIRKLNHYFSHQEVLAEKTILEEIGVGCQWP 236
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA----INIGRDAAQYI 296
I + K + L I+L +G+I ++ + +G+ +A + IG++ ++I
Sbjct: 237 IGAISGIKNNQLELKSILLDKNGEILYQKTLSGSIREAKEMGVQIGKEMIEFI 289
>gi|144479|gb|AAA23113.1| porphobilinogen deaminase [Prosthecochloris vibrioformis]
Length = 279
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 130/239 (54%), Gaps = 9/239 (3%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT----KLL 92
NI + + T GD + + L++IG GLFT++IEK L++GEID AVHS KD+PT L
Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEIDLAVHSLKDVPTVRRKAWL 61
Query: 93 KGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRG 152
S PR R F Q + + + + TSSLRR + LL R D+ ++D RG
Sbjct: 62 SPRSPSVKTPR---RHHF--QVRQGVDGPSAEAKMATSSLRRMSQLLSLRPDLEIMDIRG 116
Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212
+ TR K + A++LAYAG+ RL+ I EIL E P+ GQGA+ IET ++
Sbjct: 117 NLNTRFKKFDEGDFDAMMLAYAGVYRLEFSDRITEILPHETMLPAVGQGALGIETRTDDA 176
Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
+ +E+V+V+N ++T ERA L L G C+ I F TL V + DGK
Sbjct: 177 ETREIVRVLNDDNTEMCCRAERALLRHLQGGCQIPIGSFGSYIDGTLKLLAFVGSVDGK 235
>gi|237742175|ref|ZP_04572656.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13]
gi|229429823|gb|EEO40035.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13]
Length = 302
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 140/272 (51%), Gaps = 5/272 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ +N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
DG C + + ++ G + F + L +I
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDEGKQI 270
>gi|256845448|ref|ZP_05550906.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2]
gi|256719007|gb|EEU32562.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2]
Length = 302
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 138/266 (51%), Gaps = 5/266 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ +N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL 266
DG C + + ++ G + F + L
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYL 264
>gi|225012137|ref|ZP_03702574.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A]
gi|225003692|gb|EEG41665.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A]
Length = 300
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 144/266 (54%), Gaps = 8/266 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RIGTR S LAL A E ++ +++ P ++ + + GD+ N+ L +G +G+FT+
Sbjct: 3 RIGTRKSKLALWQANEVKA-ILESEGYP---CCLVHIESNGDQDLNQPLYAMGIQGVFTK 58
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
++ L++ +ID AVHS KD+PT L KG+ I A L R + DV + + A +
Sbjct: 59 TLDTALLNEKIDIAVHSLKDVPTLLPKGINIKAVLSRGNPMDVLVYNPA--FMGWETEAS 116
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT SLRRKA LR V + RG ++ R+ KLNN+ + A AG+ RL +
Sbjct: 117 IGTGSLRRKAQWLRKNPKHQVENLRGNLQKRIEKLNNSNWSGAIFAQAGLDRLNLLQDNY 176
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+L E P+P QG I I + N + ++ IN +T ER+FL L+G C +
Sbjct: 177 EVL--EWMIPAPSQGIIGIASLEKNKELNAVLDKINCAETSLCAQIERSFLNTLEGGCTA 234
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKI 272
I AYC +TLYF G + + DG I
Sbjct: 235 PIGAHAYCIENTLYFKGGLFSLDGTI 260
>gi|166033239|ref|ZP_02236068.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC
27755]
gi|166027596|gb|EDR46353.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC
27755]
Length = 310
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 140/266 (52%), Gaps = 2/266 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+R+GTR S LALA + L ++VII T GD L +IG KG+F
Sbjct: 3 YRVGTRGSKLALAQTKQVIEKLKSAFPEDEFDVVII--KTTGDMDQKSRLDQIGSKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++L+ +I AVHS KDMP GL + RED RDV I A S+ DL +
Sbjct: 61 KEIEEELLEEKIHLAVHSMKDMPDTTADGLIFAKAWKREDPRDVLILREAVSVDDLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT S RRK LL+ R D++++ RG ++TR+ K+ + I+LA AGI RL +E+ I
Sbjct: 121 VIGTGSKRRKYQLLKIRPDLNIVGIRGNVDTRIRKMQEEEMDGIVLAVAGINRLGREQEI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L + P+P QG + +E +N + + ++ ++T V ER FL ++ GSC
Sbjct: 181 TCYLEPDQMIPAPAQGTLALEVKADNIQLIRKLNRLSDQETDICVKAERQFLKQIGGSCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
+ + + L + DGK
Sbjct: 241 LPVGAYCKIQDEKLVLRAMFGTEDGK 266
>gi|35309|emb|CAA28499.1| unnamed protein product [Homo sapiens]
Length = 361
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 140/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 HNRVGQILHPEKCMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|194864825|ref|XP_001971126.1| GG14785 [Drosophila erecta]
gi|190652909|gb|EDV50152.1| GG14785 [Drosophila erecta]
Length = 650
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 18/282 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG K LF
Sbjct: 8 IRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGEKSLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDL 121
T ++E L +G +D VHS KD+PT L G+ I A L RED RD + + ++ L
Sbjct: 65 TRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRDNFKGHTIASL 124
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+ R+
Sbjct: 125 PKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGLVRM 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I ++L D + GQGA+ +E N+ + +++ + +T + ER+FL
Sbjct: 185 GWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSFLKT 244
Query: 240 LDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
L G C + +A ++ KG L G V + DG I
Sbjct: 245 LGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAI 286
>gi|262341328|ref|YP_003284183.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272665|gb|ACY40573.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 309
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 149/290 (51%), Gaps = 13/290 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RIGTR SPLA+ A + L+ H + + ++GD I N + + G
Sbjct: 2 KKIIRIGTRNSPLAVFQA-QKVQKLLKKEGYFSH---LFKIKSEGDLIQNVPIHALKHVG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDL 121
+FT+++ ++SGEID AVHS KD+P L +G+ +SA+L RE D + ++ L D
Sbjct: 58 VFTKKLTNIMLSGEIDMAVHSLKDVPINLPEGIILSAFLKRESFFDSLVYKGSSDFLYDP 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+H+VI T S+RR A +ID RG I TRL KL N+ L A G++RL
Sbjct: 118 KIHAVIATGSIRRSAFWKNRYPHHGLIDLRGNINTRLKKLQNSSWKGALFAQVGLERLGI 177
Query: 182 EKVIKEILN---IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
K LN ++ PSPGQG I + T L+K ++ +T S N ER FL
Sbjct: 178 LNNFK-CLNCKILDWMIPSPGQGIIVVSTLEKKDSINSLIKKLDDIETRLSANIERQFLK 236
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--SRNGNRCDAI 286
L G C S I A K +YF G++L+ DG H++ +R G D I
Sbjct: 237 TLGGGCISPIGAHAKIKNKIIYFTGMLLSLDG--MHKIKKTRIGTNYDLI 284
>gi|291412990|ref|XP_002722769.1| PREDICTED: hydroxymethylbilane synthase [Oryctolagus cuniculus]
Length = 365
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 25 IRVGTRKSQLARIQTDSVVATLKTLY--PGLRFEIIAMSTTGDKILDTALSKIGEKSLFT 82
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G + A RE+ D + H ++L L
Sbjct: 83 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTVGAICKRENPCDAVVFHPKFVGKTLATLP 142
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 143 ERSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEQQEFSAIILAVAGLQRMGW 202
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 203 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLKHLE 262
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 263 GGCSVPVAVHTAMKDGQLYMTGGVWSLDG 291
>gi|71892349|ref|YP_278083.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123747812|sp|Q491Z6|HEM3_BLOPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71796455|gb|AAZ41206.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 300
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 139/270 (51%), Gaps = 2/270 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K +I TR S LA+ A + L H P +I ++P+ T GD+ N
Sbjct: 1 MKNKILKIATRKSQLAICQAQYVHNELKHYH--PTLSIELMPIVTTGDKFLNIDAKNKIK 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG F +E+E LI+ D AVHS KD+ L L + R D RD F+S ++
Sbjct: 59 KGAFIKELEHALINFRADIAVHSMKDITVPLPDELTLPVLCKRNDPRDAFVSLKYPNIDT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + SVIGTSSLRR+ + R D+ V + RG I+TRL KL + AI+LA AG++RL+
Sbjct: 119 LPIGSVIGTSSLRRQCQIRAHRPDLVVSNLRGNIDTRLKKLQYGQYDAIVLAVAGLQRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ ++ D P+ GQG I IE N+ L+ + H++T V ERA L
Sbjct: 179 LHEYIRVHIDPSDLLPAMGQGVIAIECRSNDADILSLLSPLYHQETSFRVRAERAVTTYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+ C IA +A + ++ ++ DG
Sbjct: 239 ESYCHLPIASYAEIEEDQIWLRALIGLPDG 268
>gi|301788448|ref|XP_002929638.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Ailuropoda
melanoleuca]
Length = 361
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L + P I+ +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|295317399|ref|NP_001171279.1| porphobilinogen deaminase isoform 1a [Felis catus]
gi|289191079|gb|ADC93652.1| hydroxymethylbilane synthase housekeeping form 1a [Felis catus]
Length = 361
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|124027712|ref|YP_001013032.1| porphobilinogen deaminase [Hyperthermus butylicus DSM 5456]
gi|158513943|sp|A2BL26|HEM3_HYPBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|123978406|gb|ABM80687.1| Porphobilinogen deaminase [Hyperthermus butylicus DSM 5456]
Length = 303
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 159/304 (52%), Gaps = 13/304 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S L++A ++ V + +VI+ T+GD ++ T IGGKGLF
Sbjct: 3 LRVATRGSKLSIAQTMIALEAIKRVEPSLEYELVIV--KTRGDIHQDKPFTAIGGKGLFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLAL 123
+E+ ++ G D AVHS KD+P+ + GL ++ PR+ DV + +++ DL
Sbjct: 61 KEVNLAVLEGRADIAVHSLKDVPSAISPGLVLAMTPPRDPPYDVLVVRGGKEKTIWDLPS 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSS RR A+L R D+ RG ++TRL KL + AI+LA AG+KRL +
Sbjct: 121 GAIVGTSSARRVAMLKHVRRDLVFKVLRGNVDTRLRKLEQGQYDAIVLAEAGLKRLGVDI 180
Query: 183 ---KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ +IL PP+PGQG I + T + +++ + + ERAFLA
Sbjct: 181 EYWRIPPDIL-----PPAPGQGIIGVYTLSSRSDILPILEKASDQKAMAEARAERAFLAY 235
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C + + +A +G+TLYF+ + + DG EV G+ +G +AA +R +
Sbjct: 236 AGGGCHTPLGAYAELRGNTLYFHAALASPDGSRRVEVRVEGDPDKPTQVGLEAAFELRRL 295
Query: 300 SNKN 303
+ +
Sbjct: 296 AARE 299
>gi|301788450|ref|XP_002929639.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Ailuropoda
melanoleuca]
Length = 344
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L + P I+ +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270
>gi|157125875|ref|XP_001654431.1| porphobilinogen deaminase [Aedes aegypti]
gi|108873496|gb|EAT37721.1| porphobilinogen deaminase [Aedes aegypti]
Length = 534
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 150/278 (53%), Gaps = 15/278 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LAL +T+ + + K+ P I ++T GDR+ N++L +IG K LF
Sbjct: 10 IRVGSRKSELAL---IQTKHVIACLQKLNPDVQYEIHTMTTVGDRVLNKSLPKIGEKSLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDL 121
T+++E L +G +D VHS KD+PT L G+ I A L RED RD + + ++L L
Sbjct: 67 TKDLEDALRNGGVDFVVHSLKDLPTSLPIGMAIGAVLEREDPRDALVLNEKFRGKTLSTL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
SVIGTSSLRR A L R + V D RG + TRL KL+ +K I+LA AG+ R+
Sbjct: 127 PKGSVIGTSSLRRSAQLARLHPHLVVCDIRGNLNTRLAKLDAEGSKFAGIVLAQAGLVRM 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL
Sbjct: 187 GWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSFLKT 246
Query: 240 LDGSCKSAIAGFAY------CKGSTLYFYGIVLASDGK 271
L G C + +A K + L G V + DGK
Sbjct: 247 LGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGK 284
>gi|305665660|ref|YP_003861947.1| porphobilinogen deaminase [Maribacter sp. HTCC2170]
gi|88710417|gb|EAR02649.1| porphobilinogen deaminase [Maribacter sp. HTCC2170]
Length = 529
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 149/294 (50%), Gaps = 8/294 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A ++ L + H ++P+ + GD + ++ L E+G G+
Sbjct: 3 KIIRIGTRDSELALWQANAVKNQLEAL----GHQTTLVPVKSTGDIVLDKPLYELGVTGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +++G+ID AVHS KD+PT L KG+ +A L R + D+ + +
Sbjct: 59 FTKTLDVAMLNGDIDIAVHSMKDVPTALPKGIVQAAVLKRANYLDILAYNDNEEFLG-GR 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++I T SLRRKA L +V+D RG I +R+ KLN+N + + A AG+ R+ E
Sbjct: 118 DAIIATGSLRRKAQWLNRYPTHTVVDLRGNINSRMQKLNDNDWNGAIFAAAGLDRIGLEH 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + + P+P QGAI + N+ E +NHE T ER FL L+G
Sbjct: 178 --ENTIGLTWMVPAPAQGAIMVVALENDEYVLEACAQMNHEATEICTGLEREFLRILEGG 235
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + I AY K + G++L+ DGK E N+ RD A I
Sbjct: 236 CTAPIGALAYINKEEEVKLKGVLLSLDGKKRLEAEFAEPLGKHQNMARDCANSI 289
>gi|220913234|ref|YP_002488543.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6]
gi|219860112|gb|ACL40454.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6]
Length = 332
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 30/292 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL +T L V P + ++ + T GD +T L+++GG G+F
Sbjct: 3 VRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIRTDGDVLTG-PLSQMGGTGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L+ E D AVHS KD+PT GL ++A R D+RDV + L DL +
Sbjct: 59 AALRDALLRNECDVAVHSLKDLPTGAAVGLSLAATPKRVDVRDVLCARDGLKLADLPAGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK---LNNNKAH-----------AILL 171
+GT S RR A L R+D+ ++D RG ++TRL + L N + A++L
Sbjct: 119 KVGTGSPRRAAQLRAARADLEIVDIRGNVDTRLGRVPGLPGNATNEVVPGKSCDLDAVVL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPK-------AQEL----VK 219
A AG++R+ + + E L + P+ GQG++ IE+ + P+ +QE+ +
Sbjct: 179 AAAGLERISRLDAVSEYLEPDVMLPAAGQGSLAIESRTADAPRKPGSTEGSQEVLAQALA 238
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
++ DT +V ERA LA L+ C + + +AY KGS L+ +V A DGK
Sbjct: 239 ALDDPDTRLAVTAERALLARLEAGCAAPVGAYAYRKGSMLHLEAVVCAVDGK 290
>gi|326930594|ref|XP_003211431.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog,
partial [Meleagris gallopavo]
Length = 1060
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 129/235 (54%), Gaps = 4/235 (1%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
I+ +ST GD+I + L++IG K LFT+E+E L E+D VHS KD+PT L G I A
Sbjct: 752 IVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGA 811
Query: 100 YLPREDIRDVFISHTAQSLKDLAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
RE+ D + H K L+L SVIGTSSLRR A L + + D RG + T
Sbjct: 812 ICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNT 871
Query: 157 RLNKLNNNKA-HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
RL KL+ + AI+LA AG+KR+ E I ++L+ ED + GQGA+ +E + +
Sbjct: 872 RLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETL 931
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+V V++ +T ERAF+ L+G C +A K LY G V + DG
Sbjct: 932 NMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDG 986
>gi|323358316|ref|YP_004224712.1| porphobilinogen deaminase [Microbacterium testaceum StLB037]
gi|323274687|dbj|BAJ74832.1| porphobilinogen deaminase [Microbacterium testaceum StLB037]
Length = 372
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 143/269 (53%), Gaps = 7/269 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LALA + ++ + ++P+ ++GD + +L+++GG+G+F
Sbjct: 4 PLRLGTRRSALALAQSQMVADAVAAASG---REVELVPIVSEGD-VNRASLSQLGGRGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L +G D VHS KD+PT +GL I+A PRED RDV I+ L L
Sbjct: 60 ANGLREALAAGRCDFLVHSLKDLPTAQPEGLVIAATPPREDARDVVITRDGTPLHALEAG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-- 182
+ +GT S RR A LR + + D RG +++RL ++ + + A++LA AG+ RL E
Sbjct: 120 ARVGTGSPRRIAQALRHNPRLDIRDIRGNVDSRLARVRDGELDAVILAAAGLSRLGGELG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ E L + ++P +PGQG++ +ET + + + ++ E T ++ ER L+ LD
Sbjct: 180 GLQSEPLGLAEWPTAPGQGSLAVETRTDIDADILAALSALDDEVTRAAITAERTVLSVLD 239
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C + + A L +V A DG
Sbjct: 240 AGCHAPVGTHASIVDGDLRLRAVVYALDG 268
>gi|302559228|ref|ZP_07311570.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
gi|302476846|gb|EFL39939.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
Length = 319
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ V P + ++ ++T GD ++ L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVSQVTGRP---VELVEITTYGD-VSREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L GE+D AVHS KD+PT L ++A RED RDV ++ A L D
Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELVVAAIPVREDPRDVVVARDALKLTD 116
Query: 121 LALHSVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L + RS D + RG ++TR+ + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARSHGMDFETVPIRGNVDTRIGYVTKGDLDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+
Sbjct: 177 NRVGRSEDVTDFLSVDTVLPAPGQGALAIECTADNAALIAELAELDDPLTRAAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFA--YCKGS---TLYFYGIVLASDGKIFHEVSRNGNRCD----AIN 287
LA L+ C + + A G + G+V +DG ++S G + A+
Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAAMA 296
Query: 288 IGRDAA 293
+GR+ A
Sbjct: 297 LGRELA 302
>gi|195440018|ref|XP_002067856.1| GK12668 [Drosophila willistoni]
gi|194163941|gb|EDW78842.1| GK12668 [Drosophila willistoni]
Length = 629
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 152/287 (52%), Gaps = 18/287 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIG 59
++ K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 3 IQDKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNISLPKIG 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ 116
K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + +
Sbjct: 60 EKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGH 119
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
S+ L SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA A
Sbjct: 120 SIATLPKGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQA 179
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R+ I ++L D + GQGA+ +E N+ ++++ + +T + ER
Sbjct: 180 GLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDGPVLDMLQKLLCLNTTCRILAER 239
Query: 235 AFLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
+FL L G C + +A ++ KG L G V + DG I
Sbjct: 240 SFLKTLGGGCSAPVAVWSNLKGEPMTANSQDVGLSLTGAVWSLDGAI 286
>gi|239929697|ref|ZP_04686650.1| porphobilinogen deaminase [Streptomyces ghanaensis ATCC 14672]
gi|291438017|ref|ZP_06577407.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672]
gi|291340912|gb|EFE67868.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672]
Length = 319
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 150/290 (51%), Gaps = 15/290 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59
M +K R+GTR S LA+A + + ++ V P + ++P++T GD T+R L +IG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVRQVTGRP---VELVPITTYGD--TSREHLAQIG 55
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + + L GE+D AVHS KD+PT L ++A RED RDV +
Sbjct: 56 GTGVFVAALREALARGEVDFAVHSLKDIPTTQPDELVVAAIPVREDPRDVMVGRDVPKFT 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
DL + IGT S RR A L + +I + RG ++TR+ + + + A++LA AG
Sbjct: 116 DLPRGARIGTGSPRRMAQLNAYARAHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAG 175
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ + + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+
Sbjct: 176 MNRVGRSEEVTDFLSVDTVLPAPGQGALAVECTADNAPLIAALAELDDPLTRAAVTAERS 235
Query: 236 FLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG 280
LA L+ C + + A G + G+V +DG ++S G
Sbjct: 236 LLAALEAGCSAPVGALADLLGDGQTVKEMRLRGVVGTTDGTKLVQLSTTG 285
>gi|224510663|pdb|3EQ1|A Chain A, The Crystal Structure Of Human Porphobilinogen Deaminase
At 2.8a Resolution
gi|224510664|pdb|3EQ1|B Chain B, The Crystal Structure Of Human Porphobilinogen Deaminase
At 2.8a Resolution
Length = 361
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + +G + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287
>gi|213964237|ref|ZP_03392470.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno]
gi|213953127|gb|EEB64476.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno]
Length = 293
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 147/269 (54%), Gaps = 8/269 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L + ++ I+ + GD ++ L E+G G+
Sbjct: 2 KTIRIGTRDSELALWQAKTVQHQLEAL----GYSTEIVSTKSHGDIELSKPLYEMGVIGI 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L++GEID AVHS KD+PT L G+ + A L R + DV + S D+ +
Sbjct: 58 FTKALDIALLNGEIDIAVHSMKDVPTALPDGIVVGAVLKRGNPHDVLVYKGDLSFLDVEI 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ I TSSLRRKA L ++ + RG + TRL KL +N + + A AG++R+ K
Sbjct: 118 -ATIATSSLRRKAQWLHRYPHHNIENLRGNVNTRLQKLADNPWNGAIFAAAGLERIN--K 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + L ++ P+P QGAI + H +N Q ++ I+ +T+ + ERAFL L+G
Sbjct: 175 LPENHLRLDWMFPAPAQGAIMVTLHEDNVPLQGVLLRIHDGNTYVATQVERAFLRALEGG 234
Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGK 271
C + I FA G +YF G + + DGK
Sbjct: 235 CTAPIGAFAQYDGQQKVYFKGGLWSEDGK 263
>gi|291452105|ref|ZP_06591495.1| porphobilinogen deaminase 1 [Streptomyces albus J1074]
gi|291355054|gb|EFE81956.1| porphobilinogen deaminase 1 [Streptomyces albus J1074]
Length = 323
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 155/295 (52%), Gaps = 21/295 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59
M +K R+GTR S LA+A + + + VH++ + ++ ++T GD T+R L +IG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADA---VHQLTGRPVELVEITTYGD--TSREHLAQIG 55
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + + L+ GE+D AVHS KD+PT L ++A PRED RDV I+ +
Sbjct: 56 GTGVFVAALREALVRGEVDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFE 115
Query: 120 DLALHSVIGTSSLRRKALLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+L + +GT S RR A L + R + + RG I+TR+ + + + A++LA AG
Sbjct: 116 ELPEGARVGTGSPRRMAQLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAG 175
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN-----PKAQELVKVINHEDTWDSV 230
+ R+ + + E L+++ P+PGQGA+ IE + P A L + ++ T +V
Sbjct: 176 LHRVGRSDEVTEYLSVDTILPAPGQGALAIECAAGHEADGLPLAAVLAE-LDDPATRAAV 234
Query: 231 NCERAFLAELDGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG 280
ER+ LA L+ C + + A G + G+V + DG ++S G
Sbjct: 235 TAERSLLAALEAGCSAPVGALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTG 289
>gi|307244624|ref|ZP_07526728.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM
17678]
gi|306492005|gb|EFM64054.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM
17678]
Length = 310
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 149/303 (49%), Gaps = 20/303 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LALA S ++D K P I + TKGD+I +++L +IG KGLF E
Sbjct: 5 VGTRGSALALAQTDSIISLVLD--KFPDLEIEKKIIKTKGDKILDKSLDKIGDKGLFVSE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV- 126
IE++L+ G ID AVHS KDMPTK+ GL+++ R+D RDV + + L+ +
Sbjct: 63 IERELLEGTIDFAVHSLKDMPTKISPGLKLAQTPERQDPRDVLVINPKHQLRPEDIMDWL 122
Query: 127 -------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
IGT S RR + L R I + RG I TRL KL + AI+LA AGI RL
Sbjct: 123 RSSQGLKIGTGSKRRTSQLKRINESIQPMMIRGNIGTRLEKLVSQDLDAIVLAAAGINRL 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + E+ P+ GQGA+ IE N+ + + + + ER FL
Sbjct: 183 GMDGLNLYHFSYEEMIPACGQGALAIEVRSNDENTDRIFDFLADDQACMEIEAERTFLEV 242
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASD------GKIFHEVSRNGNRCDAINIGRDAA 293
++G C + G+ G+ D G++ E S G A +G+D A
Sbjct: 243 INGGCHVPVGATVKKVGNKWVLMGMYGREDCSSIVYGQLDFEPSLGG----AKKVGQDLA 298
Query: 294 QYI 296
Y+
Sbjct: 299 SYL 301
>gi|194748513|ref|XP_001956689.1| GF24457 [Drosophila ananassae]
gi|190623971|gb|EDV39495.1| GF24457 [Drosophila ananassae]
Length = 648
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 24/289 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60
++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV------FISHT 114
K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD F HT
Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172
SL + SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA
Sbjct: 121 IASLPN---GSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILA 177
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ R+ I ++L D + GQGA+ +E N+ +++ + +T +
Sbjct: 178 QAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDEPVLAMLQKLMCLNTTCRILA 237
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
ER+FL L G C + +A ++ KG L G V + DG I
Sbjct: 238 ERSFLKTLGGGCSAPVAVWSNLKGEPLNGNTQEVGLSLTGAVWSLDGAI 286
>gi|57167590|ref|ZP_00366730.1| porphobilinogen deaminase [Campylobacter coli RM2228]
gi|57020712|gb|EAL57376.1| porphobilinogen deaminase [Campylobacter coli RM2228]
Length = 308
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 137/248 (55%), Gaps = 6/248 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + L + H+I +++ TKGD + + L +IGGKGL
Sbjct: 2 KELVIATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 FTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +K
Sbjct: 119 GAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLDK 178
Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + ++ P+ QGA+ IE+ +++ + E +K +N ++ ER F++ L+
Sbjct: 179 QVNFVYTFSKDELIPAASQGALGIES-IDDEQILEFLKCLNDDNALIETTIEREFISTLE 237
Query: 242 GSCKSAIA 249
G C+ I
Sbjct: 238 GGCQVPIG 245
>gi|13277999|gb|AAH03861.1| Hydroxymethylbilane synthase [Mus musculus]
Length = 361
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287
>gi|330945628|gb|EGH47118.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 201
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 2/202 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGA 202
E I ++++D P+ G G
Sbjct: 179 FEDRITSAISVDDSLPAGGPGG 200
>gi|302896420|ref|XP_003047090.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728018|gb|EEU41377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 334
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 137/257 (53%), Gaps = 12/257 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +GTR SPLALA +L + P H I ++T GDR N L GGKG
Sbjct: 7 KNVINVGTRKSPLALAQTNIVVDALK--AQFPDHEFPIHGMTTTGDRDQNTALYNFGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHTA 115
L+T ++E++L++ E+D VHS KDMPT L +G + RED RD + H
Sbjct: 65 LWTSQLEERLVNKELDLVVHSLKDMPTSLPEGCVLGCVTSREDPRDTLVIKKSLQEKHGW 124
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYA 174
++L DL S+IGTSS+RR A L+R + D RG I+TRL KL ++ + I+LA A
Sbjct: 125 KTLADLPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLQKLEDDPELTGIILAAA 184
Query: 175 GIKRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G++R+ I + L + + GQGA+ +E ++ K + +K I +E T +
Sbjct: 185 GLQRMDLGHHISQFLESDTGGILHAVGQGALGVECRADDEKVLKFLKTIENEQTMLACEA 244
Query: 233 ERAFLAELDGSCKSAIA 249
ERA + L+G C I
Sbjct: 245 ERAVMRALEGGCSVPIG 261
>gi|156937477|ref|YP_001435273.1| porphobilinogen deaminase [Ignicoccus hospitalis KIN4/I]
gi|166217774|sp|A8AAB4|HEM3_IGNH4 RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|156566461|gb|ABU81866.1| hydroxymethylbilane synthase [Ignicoccus hospitalis KIN4/I]
Length = 304
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 151/295 (51%), Gaps = 11/295 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI---GGKGL 63
+I R S L+L S L+ P +I + T GD+ N E+ G GL
Sbjct: 4 KIAARGSKLSLKQVSMFTSYLLKF--FPDLEYEVITVKTTGDK-ANAPFEELAKRGLTGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLA 122
F +E+ K ++ G+ D AVHS KD+PT+L L+I+A+LPR+ DV IS + DL
Sbjct: 61 FEKEVNKAVLEGKADVAVHSLKDLPTELDPRLEIAAFLPRDPPYDVLISRAGNYDIFDLP 120
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GTSS RRKAL+ R D+ V D RG ++TRL KL + AI+LA AG+ RL
Sbjct: 121 KGSVVGTSSARRKALIKNLRPDLVVKDLRGNVDTRLEKLRRGEYDAIVLAEAGVSRLGL- 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V L+ FPPSPGQG I T + +L+K I+ + ER L E G
Sbjct: 180 NVDYVRLDWRLFPPSPGQGIIVAVTR-KGSEISDLLKSISDVKSEKLATAERTVLKEFGG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C A+ A+ +GS + VL+ G+ +V G + +G AA+ ++
Sbjct: 239 GCFVALGAIAFEEGSLIRLRATVLSPSGRERVDVELIGKGPE--EVGMRAAERLK 291
>gi|119871570|ref|YP_929577.1| porphobilinogen deaminase [Pyrobaculum islandicum DSM 4184]
gi|158512988|sp|A1RQK2|HEM3_PYRIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|119672978|gb|ABL87234.1| hydroxymethylbilane synthase [Pyrobaculum islandicum DSM 4184]
Length = 301
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 153/306 (50%), Gaps = 21/306 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F
Sbjct: 3 IRVATRGSKLSLIQTEELLAQIKAVE--PDVQFEIVVVKTTGDLIQDKPLFQIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ ++ GE D AVHS KD+P++L GL ++ + R DV IS +L+ L +
Sbjct: 61 KEVNLAVLRGEADMAVHSLKDLPSELTPGLVLAGFSKRAPPHDVLISRGGYTLETLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG++RL
Sbjct: 121 VVGTSSVRRAEFLKAVRPDVEVKPLRGNVDTRVGKVLSGQYDAAVMAAAGLQRLYGSSPP 180
Query: 186 KEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I L +E+ PP PGQG + + +L+K + + ERAFLA +
Sbjct: 181 VSIVPLRVEEVPPPPGQGIVVAVVKEEDSWLIDLLKKASDKTAAIEATAERAFLAGVGAG 240
Query: 244 CKSAIAGFAYC--KGSTLYFYGIVLASDG-----KIFHEVSRNGNRCDAINIGRDAAQYI 296
C AI G A +GS + G A+ G K+F E D + +G+ AAQ I
Sbjct: 241 CHVAIGGVAKLTPQGSLEFTAG--YAAGGAKYVVKVFGE--------DPVEVGKRAAQLI 290
Query: 297 RFISNK 302
+ K
Sbjct: 291 AEVRQK 296
>gi|122844|sp|P22907|HEM3_MOUSE RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 361
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ L
Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTVIKDGQLYLTGGVWSLDG 287
>gi|46130844|ref|XP_389153.1| hypothetical protein FG08977.1 [Gibberella zeae PH-1]
Length = 335
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 135/252 (53%), Gaps = 12/252 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR SPLALA +L + P H+ I ++T GDR N L GGKGL+T +
Sbjct: 13 VGTRKSPLALAQTQIVVDALK--QRFPDHDFPIHSMTTTGDRDQNTALYNFGGKGLWTSQ 70
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHTAQSLKD 120
+E++L++ E+D VHS KDMPT L +G + RED RD + H ++L D
Sbjct: 71 LEERLVNRELDIVVHSLKDMPTVLPEGCVLGCVTSREDPRDTLVIKKELQDKHGWKTLAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L S+IGTSS+RR A L+R + D RG I+TRL KL + I+LA AG++R+
Sbjct: 131 LPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLRKLEEDPDLTGIILAAAGLQRM 190
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
I + L E+ + GQGA+ +E ++ K +K I +E T + ERA +
Sbjct: 191 DLGHHITQFLESENGGILYAVGQGALGVECRGDDEKVLGFLKTIENEQTALACEAERALM 250
Query: 238 AELDGSCKSAIA 249
L+G C I
Sbjct: 251 RALEGGCSVPIG 262
>gi|294785256|ref|ZP_06750544.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27]
gi|294486970|gb|EFG34332.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27]
Length = 302
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 138/266 (51%), Gaps = 5/266 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ +N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL 266
DG C + + ++ G + F + L
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYL 264
>gi|15644865|ref|NP_207035.1| porphobilinogen deaminase [Helicobacter pylori 26695]
gi|2495174|sp|P56140|HEM3_HELPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|2313328|gb|AAD07304.1| porphobilinogen deaminase (hemC) [Helicobacter pylori 26695]
Length = 306
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEKSAFCCRLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDL 283
>gi|387507|gb|AAA39891.1| porphobilinogen deaminase (erythroid sp.) [Mus musculus]
Length = 344
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ L
Sbjct: 62 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTVIKDGQLYLTGGVWSLDG 270
>gi|332291690|ref|YP_004430299.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169776|gb|AEE19031.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5]
Length = 304
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 146/291 (50%), Gaps = 11/291 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A +S L + + ++P+ + GD I ++ L E+G G+
Sbjct: 3 KTIRIGTRDSELALWQAKTVQSQL----EANGYKTELVPVKSTGDLILDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + A K
Sbjct: 59 FTKTLDVAMLNGIVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKGAPDYKQ--- 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRR+A L + D RG + TRL KL + + A AG+KR+
Sbjct: 116 ACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRI---N 172
Query: 184 VIKEILNIEDFP-PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E + D+ P+P QGA+ I + E +NH+ T ER FL L+G
Sbjct: 173 VLPENYEVLDWMIPAPAQGAMLIVAMEEDQFCLEACATLNHKPTALCTYIEREFLKTLEG 232
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + I A G + F G++ + DG EV + ++ +A+ G D A
Sbjct: 233 GCTAPIGALAEEIGDDIRFRGVLFSLDGATKIEVEQVVSKANAVGFGTDCA 283
>gi|57242140|ref|ZP_00370080.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195]
gi|57017332|gb|EAL54113.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195]
Length = 308
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLAL + L H I H + STKGD + + L +IGGKGL
Sbjct: 2 KKLIIATRKSPLALWQSEFVADILRKTHGIEVH---LEGFSTKGDILLDSPLAKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L
Sbjct: 59 FTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALPQ 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + AI+LA AG+KRL E
Sbjct: 119 NAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKGGEFDAIILASAGVKRLGLES 178
Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K I ++ P+ QG + I++ N + L++ +N E + ER F+ L+
Sbjct: 179 EVKFIYRFSKDELVPAATQGILGIQSPDKN-EILTLLQCLNDEKSLIESTVERDFIRTLE 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I A G + I+ DG
Sbjct: 238 GGCQVPIGINAELMGEQITVRSILGLPDG 266
>gi|297180020|gb|ADI16245.1| porphobilinogen deaminase [uncultured bacterium HF0010_16H03]
Length = 301
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 149/274 (54%), Gaps = 7/274 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDV-HKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL A + + + KI + +IP+S++GD +T++ L ++GGKGLF
Sbjct: 3 IRIATRKSPLALFQAEYVANQIKQLDQKI---KVELIPMSSEGD-LTDKPLHQVGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ +E L++ D AVHS KD+P L K +I + R D+ ++ S K +
Sbjct: 59 IKTLESALLNDSADIAVHSLKDVPANLEKNFKIISVCKRAAASDILLTKKGTSFKSMPEG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S+IGTSS RRKA + R D+S I RG I TR+NKL+ N +++A A ++RL
Sbjct: 119 SIIGTSSPRRKAQIKILRPDLSTISVRGNIATRINKLHKNHFDGLIIAKAAMERLNLPFK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ ++ P+ QG I IE +N +++ IN E ER+F+A+L+GSC
Sbjct: 179 NTYEFSYQEMLPAATQGFIGIECIASNKDLIKMLGSINSEKDMILAEAERSFVAQLNGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEV 276
S IA + + + + L+ +G +IF E+
Sbjct: 239 LSPIAIYCREESNQILISAKALSQNGDKQIFKEI 272
>gi|387506|gb|AAA39890.1| porphobilinogen deaminase (housekeeping) [Mus musculus]
Length = 400
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 60 IRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSLFT 117
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ L
Sbjct: 118 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLETLP 177
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 178 EKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 237
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 238 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 297
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 298 GGCSVPVAVHTVIKDGQLYLTGGVWSLDG 326
>gi|312964492|gb|ADR30032.1| porphobilinogen deaminase [Ovis aries]
Length = 350
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 10 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE D + H ++L+ L
Sbjct: 68 KELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLETLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 128 EKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 187
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL L+
Sbjct: 188 QNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRHLE 247
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + +G
Sbjct: 248 GGCSVPVAVHTAIKDGQLYLTGGVWSLNG 276
>gi|149041454|gb|EDL95295.1| hydroxymethylbilane synthase, isoform CRA_a [Rattus norvegicus]
Length = 345
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 5 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 63 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 123 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRMGW 182
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 183 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 242
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 243 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 271
>gi|256826210|ref|YP_003150170.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547]
gi|256689603|gb|ACV07405.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547]
Length = 358
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 140/265 (52%), Gaps = 5/265 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + + + D + H + ++ ++T+GD + L+ IGG G+F
Sbjct: 16 VRLGTRRSDLATTQS----THVADALRARGHEVELVLVTTEGD-VNRAPLSRIGGTGVFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++GEID AVHS KD+P + L I+A RED RD ++ +L+ L +
Sbjct: 71 SALRDALLAGEIDIAVHSLKDLPVAQPQELVIAAVPEREDPRDALVARDGLTLETLPAGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR+A L R D+ V+D RG + RL + + A++LA AG++RL + +
Sbjct: 131 RVGTGSPRREAQLRVARPDLEVVDLRGNVPRRLATVAEGELDAVVLAGAGLRRLGLTEHV 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + P+PGQGA+ +E ++ ++ +++ ++H T + ERA L L+ C
Sbjct: 191 TQWLEPQVMVPAPGQGALAVECRSDDAESIAMLEPLDHLPTRTATTAERAVLGTLEAGCS 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
+ I A G+ + DG
Sbjct: 251 APIGALARHDGARVDLMTFAGPRDG 275
>gi|91218004|ref|ZP_01254956.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755]
gi|91183862|gb|EAS70253.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755]
Length = 302
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 148/278 (53%), Gaps = 16/278 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IGTR S LA+ A + ++ L + ++ ++ P+ + GD ++ L E+G G+
Sbjct: 3 KTISIGTRDSELAMWQAHKVKTLLEN----QGYSTILKPVKSTGDLNLDQPLYEMGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L+ GEID AVHS KD+PT L KG+ A LPR + D+ + + L L
Sbjct: 59 FTKTLDVALVKGEIDIAVHSMKDVPTALPKGVVQGAVLPRANTSDILLH---KGLSFLEN 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR--LKK 181
I T SLRRKA LR V + RG + TRL KL N+ + + A AG++R LK
Sbjct: 116 KGTIATGSLRRKAQWLRKYPQHKVENLRGNVNTRLQKLQNHDWNGAIFAAAGLERINLKP 175
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ ++ P+P QGA+ + T +N ++ ++ +NH DT +V ER FL L+
Sbjct: 176 DNHIE----LDWMIPAPAQGAMLVVTMEHNTVCRKALEKLNHTDTALAVRVEREFLKTLE 231
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGK---IFHEV 276
G C + I A K + F + + DGK HEV
Sbjct: 232 GGCTAPIGALATIKDREINFRAGLFSLDGKQTFTIHEV 269
>gi|159110463|ref|NP_001103721.1| porphobilinogen deaminase isoform 2 [Mus musculus]
gi|74138074|dbj|BAE25434.1| unnamed protein product [Mus musculus]
Length = 344
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 182 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 270
>gi|116671313|ref|YP_832246.1| porphobilinogen deaminase [Arthrobacter sp. FB24]
gi|116611422|gb|ABK04146.1| hydroxymethylbilane synthase [Arthrobacter sp. FB24]
Length = 332
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 146/293 (49%), Gaps = 32/293 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL +T L + P + ++ + T GD +T +L+++GG G+F
Sbjct: 3 VRIGTRASKLALTQTQQTADQLAAIGGFP---VELVHIRTDGDVLTG-SLSQMGGTGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L+ + D AVHS KD+PT GL ++A R D+RDV + L DL +
Sbjct: 59 AALREALLRDDCDVAVHSLKDLPTGAAPGLNLAATPKRVDVRDVLCARDGFKLADLPQGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-----NNNKA---------HAILL 171
+GT S RR A L R D+ V+D RG ++TRL ++ N A A++L
Sbjct: 119 RVGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLGRVPGLPGNTTDAVVLGKSCDLDAVVL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV-------------NNPKAQELV 218
A AG++R+ + + E L + P+ GQG++ IE P AQ L
Sbjct: 179 AAAGLERIGRLDTVSEYLETDVMLPAAGQGSLAIECRTADAPRRTGSTEGSQGPLAQALA 238
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
++ DT +V ERA LA L+ C + + +A+ KGS LY V A DG
Sbjct: 239 -ALDDTDTRLAVTAERALLARLEAGCAAPVGAYAFRKGSMLYLEAAVCAVDGS 290
>gi|74181545|dbj|BAE30038.1| unnamed protein product [Mus musculus]
Length = 360
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287
>gi|159110431|ref|NP_038579.2| porphobilinogen deaminase isoform 1 [Mus musculus]
gi|74177773|dbj|BAE38979.1| unnamed protein product [Mus musculus]
gi|74198532|dbj|BAE39746.1| unnamed protein product [Mus musculus]
Length = 361
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287
>gi|317008888|gb|ADU79468.1| porphobilinogen deaminase [Helicobacter pylori India7]
Length = 306
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 149/282 (52%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIQERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDL 283
>gi|78214363|ref|NP_037300.2| porphobilinogen deaminase [Rattus norvegicus]
gi|56789892|gb|AAH88162.1| Hydroxymethylbilane synthase [Rattus norvegicus]
Length = 361
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287
>gi|2506505|sp|P19356|HEM3_RAT RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|1911164|emb|CAA72734.1| hemC [Rattus sp.]
Length = 361
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287
>gi|148234672|ref|NP_001090881.1| porphobilinogen deaminase [Sus scrofa]
gi|112980813|gb|ABI29188.1| hydroxymethylbilane synthase [Sus scrofa]
Length = 361
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE D + H ++L+ L
Sbjct: 79 KELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRECPYDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+
Sbjct: 199 QNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + +G
Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLNG 287
>gi|114051169|ref|NP_001039672.1| porphobilinogen deaminase [Bos taurus]
gi|109892198|sp|Q2KIN5|HEM3_BOVIN RecName: Full=Porphobilinogen deaminase; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS
gi|86438293|gb|AAI12574.1| Hydroxymethylbilane synthase [Bos taurus]
gi|296480113|gb|DAA22228.1| porphobilinogen deaminase [Bos taurus]
Length = 361
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE D + H ++L+ L
Sbjct: 79 KELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL L+
Sbjct: 199 QNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRHLE 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + +G
Sbjct: 259 GGCSVPVAVHTAIKDGQLYLTGGVWSLNG 287
>gi|325960061|ref|YP_004291527.1| porphobilinogen deaminase [Methanobacterium sp. AL-21]
gi|325331493|gb|ADZ10555.1| Porphobilinogen deaminase [Methanobacterium sp. AL-21]
Length = 290
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 155/291 (53%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR S LA ++T++ + ++ + I + + + GD+I N L I KG+FT
Sbjct: 1 MKVGTRGSSLA---TYQTKTIINELSIVTDEKIDVEIIKSTGDKIQNSQLYNIDAKGIFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ ++ G +D AVHS KD+PT+L L+I A RE +V +S +L +
Sbjct: 58 RELDDAVLDGTVDFAVHSLKDLPTELEGDLEIVAVPERESPNEVLVSKLG--WDELPKGA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR+A + ++ RG I+TR+ K+ + + A ++A AG+ RL + I
Sbjct: 116 TVGTSSIRREAFCNHHDKEFNIKPIRGNIDTRIKKVFSGEYDATIMAEAGLNRLGLTEYI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K+ +IE F P+ GQGAI + ++ +L K INH ++ V E+ L E+ C+
Sbjct: 176 KQRFSIEYFTPAAGQGAIAVVARSDSDVKDDLQK-INHLKSFQEVTAEKRVLLEMGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
S + A + L ++L +GKI V G+ A N+G AA+ +
Sbjct: 235 SPLGVSARINENKLKLCAVLLTQEGKIVSRVMVEGSADKASNLGLKAAKLM 285
>gi|328768210|gb|EGF78257.1| hypothetical protein BATDEDRAFT_17445 [Batrachochytrium
dendrobatidis JAM81]
Length = 342
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 132/247 (53%), Gaps = 7/247 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LA+ ++ L + P I ++T GD++ + L++IG K
Sbjct: 17 KTNFTIGTRESQLAMIQTTHVQALLK--QQYPQLTFDINGMTTTGDQVQDVALSKIGTKS 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E L +D VHS KD+PT+L G+ + A L RE DV I H+ L
Sbjct: 75 LFTKELEMALDDHSVDFVVHSLKDLPTQLPSGMMVGAILEREQPNDVVIMSLKHSFTGLA 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
L S+IGTSS+RR A L R ++ D RG + TRL KL++ + AILLAYAGI
Sbjct: 135 QLPAGSIIGTSSVRRSAQLKRRFPNLVFQDIRGNLNTRLKKLDDPASPFAAILLAYAGIH 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ I EIL + GQGAI IE N+ + L+ +NH T ER+F+
Sbjct: 195 RMGWTDRITEILPTVTILHAVGQGAIGIECRENDTCVRSLLAPLNHTPTRIRCTAERSFM 254
Query: 238 AELDGSC 244
L+G C
Sbjct: 255 RSLEGGC 261
>gi|237740509|ref|ZP_04570990.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31]
gi|229422526|gb|EEO37573.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31]
Length = 301
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 139/271 (51%), Gaps = 6/271 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60
K+ IG+R S LALA A ++SL + P I + T GD+ +N +
Sbjct: 2 KRHVVIGSRGSILALAQASLVKNSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNASL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L
Sbjct: 60 KSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + + ++K I++ED V ER F
Sbjct: 179 MADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNEDIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
DG C + + ++ + F + DGK
Sbjct: 239 DGGCHTPMGCYSQVDEDKIKFIA-AYSHDGK 268
>gi|117927446|ref|YP_871997.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B]
gi|254800230|sp|A0LRF1|HEM3_ACIC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|117647909|gb|ABK52011.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B]
Length = 331
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 145/302 (48%), Gaps = 9/302 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A E +L + + I+ + + GDR + L E G G+F
Sbjct: 10 LRLGTRRSTLARAQTEEIAGAL----RAAGCRVEIVGIQSTGDRHADVPLHEFAGSGVFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+ L+ GE+D VHS KD+PT + L I+A R D RD ++ L +L +
Sbjct: 66 AELRAALLRGEVDVVVHSMKDLPTAEIPELAIAAIPRRADPRDALVTGAGCRLAELPTGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR A L R D+ + RG ++TRL KL+ A+++A AG+ RL + +
Sbjct: 126 IVGTGSPRRAAQLRLLRPDLEIRPIRGNLDTRLGKLHAGGYAALIVAAAGLARLHRSEEA 185
Query: 186 KEILNIEDFPPSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + P+PGQGA+ +E + + ++ ++ T +V ERA LA +
Sbjct: 186 AEFFDPTVMLPAPGQGALAVECRRADIADGGRLAGILAGLDDPATRAAVTAERALLAAVG 245
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYIRFIS 300
C + + TL +V+ G S G DA ++GR AA IR +
Sbjct: 246 AGCSAPVGALGVVTADTLQLDAVVVDPSGTTAFRRSLTGTPDDASDLGRRLAADLIRAGA 305
Query: 301 NK 302
++
Sbjct: 306 DQ 307
>gi|108804800|ref|YP_644737.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941]
gi|123069014|sp|Q1AUK3|HEM3_RUBXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108766043|gb|ABG04925.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941]
Length = 305
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 144/266 (54%), Gaps = 5/266 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR SPLALA A + L + + + + T DR + L+ I + +FT +
Sbjct: 7 LGTRGSPLALAQAEACAAGL----RAAGFAVELRRIRTTSDRRPDDPLSVIDQRDVFTRQ 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+++ L++GE+D AVHS KD+PT++ +G+ ++A R D D +S + L + +
Sbjct: 63 LDEALLAGEVDLAVHSMKDVPTEVPEGIVLAAVAGRADPSDALVSEGGWGVDGLPEGARV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
TSSLRR+A LL R D+ V++ RG ++TR+ K+ A A++LA AG+ RL E V
Sbjct: 123 ATSSLRRRAQLLHRRPDLRVVEIRGNVDTRIRKMRAGAAEAVVLARAGLVRLGLE-VPHA 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ + P+ GQGA+ + +P+ +E+ + +N V ERA L L+G C+
Sbjct: 182 VIPHDVLLPAVGQGALAVAVRRGDPRLEEIRRALNDPAAEREVAAERALLRALEGGCRVP 241
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIF 273
+ A G + G+V++ DG
Sbjct: 242 VGARAVAGGRGVLLRGVVVSPDGAAL 267
>gi|297192867|ref|ZP_06910265.1| porphobilinogen deaminase domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151527|gb|EFH31219.1| porphobilinogen deaminase domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
Length = 319
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 158/309 (51%), Gaps = 17/309 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + + V ++ + ++ ++T GD ++ L +IGG
Sbjct: 1 MTERALRLGTRRSKLAMAQSGQVAEA---VRRLSGRAVELVEITTYGD-VSREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L GE+D AVHS KD+PT L ++A RED RDV I+ S +
Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELALAAVPKREDPRDVLIARDGLSFER 116
Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L + I + RG ++TR+ + N + A++LA AG+
Sbjct: 117 LPNGARIGTGSPRRMAQLNAYARTHGLTIETVPIRGNVDTRIGFVRNGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + L+++ P+PGQGA+ IE ++ + ++ T +V ER+
Sbjct: 177 NRIGRTDEVTDFLSVDFVLPAPGQGALAIECSASDADLVATLAGLDDPHTRVAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHEVSRNG----NRCDAIN 287
LA L+ C + + A G + + G+V +DG ++S G + DA
Sbjct: 237 LAALEAGCSAPVGALADLLGDGQEFTEMRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAA 296
Query: 288 IGRDAAQYI 296
+GR+ A +
Sbjct: 297 LGRELADEM 305
>gi|255533333|ref|YP_003093705.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366]
gi|255346317|gb|ACU05643.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366]
Length = 526
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 141/257 (54%), Gaps = 18/257 (7%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A + L + I+ T+GD+I N L ++ GKG FT+E
Sbjct: 6 IGTRGSDLALWQANFIKDKLAAIGVEAELKII----KTQGDKILNLRLDKLEGKGFFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRED-------IRDVFISHTAQSLKD 120
+E++L+ G ID AVHS KD+PT GL I+A RED ++D + SLK
Sbjct: 62 LEEELLGGTIDIAVHSHKDLPTVHPAGLTIAAVTEREDPSELLLILKDCVSINHKLSLKK 121
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
A+ +GTSS RRKA LL R D+++ D RG + TR+ KL + AILLA AG+ RL
Sbjct: 122 GAM---VGTSSNRRKAQLLALRPDLNIEDLRGNVPTRIQKLRDEDYDAILLARAGVNRLN 178
Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + E+++ + P+P QGA+ I+ N + ++++ INH +T + + ER L
Sbjct: 179 IDLSEFHVEVVDTTELVPAPAQGALAIQIRENENELFDILQQINHSETAEEIAIERKVLN 238
Query: 239 ELDGSCKSAIAGFAYCK 255
+G C + YCK
Sbjct: 239 LFEGGCHMPLG--CYCK 253
>gi|307826350|ref|ZP_07656554.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732591|gb|EFO03464.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 321
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ +K RI TR SPLAL A L P ++ ++T+GD+I + L +IGG
Sbjct: 6 LTEKIIRIATRRSPLALWQAEHVAERLE--RTFPGCRTELVKMTTQGDKILDAPLAKIGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL ++A L RED D F+S+ +L D
Sbjct: 64 KGLFVKELEQGMLEGLADIAVHSMKDVPVEFPEGLHLAAILIREDPTDAFVSNHYATLHD 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++ IGTSSLRR+ + + ++ RG + TRL+KL++ + AI+LA AG+KRL
Sbjct: 124 LPANARIGTSSLRRQCQIKELYPEAEILSLRGNVNTRLSKLDSGEYDAIILASAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHV 209
+ I + L+ P+ GQGAI IE +
Sbjct: 184 MAERITQCLDTSVSLPAIGQGAIGIECRI 212
>gi|119963156|ref|YP_948463.1| porphobilinogen deaminase [Arthrobacter aurescens TC1]
gi|119950015|gb|ABM08926.1| porphobilinogen deaminase [Arthrobacter aurescens TC1]
Length = 332
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 145/291 (49%), Gaps = 30/291 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL +T L V P + ++ + T+GD + +L+++GG G+F
Sbjct: 3 VRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIKTEGD-VKTGSLSQMGGTGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++ D AVHS KD+PT GL I+A R D+RDV + +L L +
Sbjct: 59 AALRDALLADACDVAVHSLKDLPTGAALGLSIAATPKRVDVRDVLCARDGMTLAQLPGGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK---LNNNKA-----------HAILL 171
+GT S RR A L R DI V+D RG ++TRL + L N A++L
Sbjct: 119 KVGTGSPRRAAQLRAARPDIEVLDIRGNVDTRLGRVPGLPGNTTDEVVQGKSCDLDAVVL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA------------QELVK 219
A AG++R+ + + E + P+PGQGA+ IE + + + +
Sbjct: 179 AAAGLERMDRLDTVSEFFESDVMLPAPGQGALAIECRTEDAPSVAGSAEGADGVLAQALA 238
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+N DT +V ERA LA L+ C + + +A+ KGS L+ +V A DG
Sbjct: 239 ALNDHDTRLAVTAERAVLARLEAGCAAPVGAYAFRKGSMLHLEAVVCAVDG 289
>gi|319953182|ref|YP_004164449.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237]
gi|319421842|gb|ADV48951.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237]
Length = 524
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 9/269 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L K + V++P+ + GD + ++ L E+G G+
Sbjct: 3 KIIRIGTRDSELALWQARTVQKQL----KEQGYQSVLVPVKSMGDLVLDKPLHELGITGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF-ISHTAQSLKDLA 122
FT+ ++ ++ GEID AVHS KD+PT L KG+ +A L R + D+ H + L
Sbjct: 59 FTKTLDIAMLKGEIDIAVHSMKDVPTVLPKGIVQAAVLKRGNYMDILAFKHNEEFLSQ-- 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VI T SLRRKA L V+D RG ++TR +KL +N + + A AG++R+ E
Sbjct: 117 KEAVIATGSLRRKAQWLNRYPTHEVVDLRGNVQTRADKLEDNDWNGAIFAAAGLERVGLE 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + + P+P QGA+ + ++ ++ +NH++T ER FL L+G
Sbjct: 177 --FENTIGLTWMVPAPAQGAVVVVALEDDEFSKTACAELNHKETEICTTLERKFLNLLEG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
C + I A K + + G++L+ DGK
Sbjct: 235 GCTAPIGALAIIKDTNVSLKGVLLSVDGK 263
>gi|183980868|ref|YP_001849159.1| porphobilinogen deaminase HemC [Mycobacterium marinum M]
gi|238054421|sp|B2HRJ2|HEM3_MYCMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|183174194|gb|ACC39304.1| porphobilinogen deaminase HemC [Mycobacterium marinum M]
Length = 314
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 140/275 (50%), Gaps = 14/275 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAATVRDALIANG----HAAELVTISTLGDR--SSAPIETLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN+++N AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + +G++F E+S G
Sbjct: 236 APVGAIAEVVES--------IDEEGRVFEELSLRG 262
>gi|260905127|ref|ZP_05913449.1| glutamyl-tRNA reductase [Brevibacterium linens BL2]
Length = 825
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 143/282 (50%), Gaps = 17/282 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + + L + + I+ + T+GD + LT GG G+
Sbjct: 477 RTIRLGTRRSKLARSQSTAIAHQLA---ALTGWRVEIVEVVTEGD-VNMSPLTGFGGTGV 532
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + + L G+ID AVHS KD+PT G+Q++A PR D DV I S +L
Sbjct: 533 FVSAVRQALHQGKIDIAVHSLKDLPTTPEAGIQMAAIPPRVDPADVLIGRDGLSFAELPA 592
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GT S RR L R DI V RG ++TR+ + + + A++LA AG++R+ +
Sbjct: 593 GSVVGTGSPRRAVQLRAARPDIEVRGVRGNVDTRIAHVRDGRLDAVVLAAAGVRRIGRLA 652
Query: 184 VIKEILNIEDFPPSPGQGAICIETH-VNNP------------KAQELVKVINHEDTWDSV 230
+ L+ + P+PGQGA+ +ET ++P + + +K ++ E T +V
Sbjct: 653 EATDSLDFDTMLPAPGQGALAVETRGADSPFALDNEVMEADAEVRTQLKRLHDETTDLAV 712
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
CERA L+ + C + I A +GS ++ DGK+
Sbjct: 713 TCERAILSRAEAGCSAPIGALATIQGSDFVVDAVMADDDGKL 754
>gi|198462481|ref|XP_001352446.2| GA21587 [Drosophila pseudoobscura pseudoobscura]
gi|198150842|gb|EAL29942.2| GA21587 [Drosophila pseudoobscura pseudoobscura]
Length = 630
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 152/286 (53%), Gaps = 18/286 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60
++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQRFEIHTMSTFGDRVLNVSLPKIGE 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + +
Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQGHT 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ L SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA AG
Sbjct: 121 IASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILAQAG 180
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+
Sbjct: 181 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILAERS 240
Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
FL L G C + +A ++ +G L G V + DG I
Sbjct: 241 FLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAI 286
>gi|307636930|gb|ADN79380.1| porphobilinogen deaminase [Helicobacter pylori 908]
gi|325997118|gb|ADZ49326.1| Porphobilinogen deaminase [Helicobacter pylori 2017]
Length = 306
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 151/285 (52%), Gaps = 5/285 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L + I + TKGD+I + L++IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSMESE---IRIVKTKGDKILDTPLSKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + +
Sbjct: 123 GTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++++ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
I A G + ++ +GK + G++ A ++ R+
Sbjct: 242 PIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRE 286
>gi|315638143|ref|ZP_07893325.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21]
gi|315481679|gb|EFU72301.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21]
Length = 308
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLAL + L H I + + STKGD + + L +IGGKGL
Sbjct: 2 KKLIIATRKSPLALWQSEFVADILRKTHHI---EVDLEGFSTKGDILLDSPLAKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L
Sbjct: 59 FTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALPQ 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + + AI+LA AG+KRL E
Sbjct: 119 NAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKDGEFDAIILASAGVKRLGLES 178
Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K I ++ P+ QG + I++ N + L++ +N E + ER F+ L+
Sbjct: 179 EVKFIYRFSKDELVPAATQGILGIQSP-NKSEILTLLQCLNDEKSLIESTVERDFIRTLE 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C+ I A G + I+ DG
Sbjct: 238 GGCQVPIGINAELIGEQITVRSILGLPDG 266
>gi|296394051|ref|YP_003658935.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985]
gi|296181198|gb|ADG98104.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985]
Length = 308
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 16/311 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A R ++ + + +VI+ +T GD+ ++ +TEIG G+FT
Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRSLGE--SAELVIV--ATVGDK-SSGPITEIG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ LI+GEID AVHS KD+PT + A R D DV +S + L +L S
Sbjct: 56 SALRDALIAGEIDIAVHSLKDLPTAQDPRFSLVAVPERADPSDVLVSRSGLPLAELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L R+D+ + RG ++TR+ K+ + AI++A AG+ RL +E+
Sbjct: 116 TVGTGAPRRAAQLRLARADLEIQPIRGNLDTRMRKVATAECDAIVVARAGLLRLGREQEA 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+L+ P+PGQGA+ +E + P + E + ++HE + + ERA LAEL C
Sbjct: 176 TEVLHPAVMLPAPGQGALAVECRSDAPASLTETLAKLDHEHSRAASAAERAVLAELSAGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNGNRC-----DAINIGRDAAQY 295
+ A G TL V+A DG + E S G A+ +GR A+
Sbjct: 236 SGPVGALARMTGQTLRVEASVIAIDGSRSVRAHAETSVLGTELLSQEQHAVALGRRVAES 295
Query: 296 IRFISNKNVFN 306
+R + +
Sbjct: 296 LRSMGAMELIG 306
>gi|210134437|ref|YP_002300876.1| porphobilinogen deaminase [Helicobacter pylori P12]
gi|226706287|sp|B6JKG8|HEM3_HELP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|210132405|gb|ACJ07396.1| porphobilinogen deaminase [Helicobacter pylori P12]
Length = 306
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++++ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+
Sbjct: 183 KAFSVKEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEKSAFCCRLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDL 283
>gi|302553238|ref|ZP_07305580.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
gi|302470856|gb|EFL33949.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
Length = 330
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 146/279 (52%), Gaps = 20/279 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+ R+GTR S LA+A + + + V ++ + ++ ++T GD ++ L +IGG
Sbjct: 13 EQGALRLGTRRSKLAMAQSGQVAEA---VRRVTGRPVELVEITTYGD-VSREQLAQIGGT 68
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A DL
Sbjct: 69 GVFVTALRDALLKGEVDFAVHSLKDLPTTQPDELVVAAVPVREDPRDVIVARDALKFTDL 128
Query: 122 ALHSVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ IGT S RR A L + RS DIS + RG ++TR+ + + + A++LA AG+
Sbjct: 129 PSGARIGTGSPRRMAQLNAYARSHSLDISTVPIRGNVDTRIGYVRSGELDAVVLAAAGLN 188
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + + L+++ P+PGQGA+ IE N + ++ T +V ER+ L
Sbjct: 189 RIGRGDEVTDFLSVDTVLPAPGQGALAIECAAGNADLVAALAELDDPFTRVAVTAERSLL 248
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276
A L+ C + + A L +DG+I E+
Sbjct: 249 AALEAGCSAPVGALAD------------LLADGQIVKEM 275
>gi|261884538|ref|ZP_06008577.1| porphobilinogen deaminase [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 174
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 36 HNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95
H++ IIP+ TKGD I + L +IGGKGLF++E+E ++ G D AVHS KD+PT GL
Sbjct: 6 HSVEIIPMKTKGDVILDTPLAKIGGKGLFSKELETSMLEGSADIAVHSLKDVPTTFPDGL 65
Query: 96 QISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155
+++ RED+RD +S ++L +L + +GT+SLRRK +L R+D+ +I RG +
Sbjct: 66 KLACVCSREDVRDAMLSMKYKNLDELPQGAKVGTTSLRRKMQILAHRADLDIISLRGNVN 125
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205
+R+ KL N + AI+LA AGI RL + K K L+I P+ GQGA+ I
Sbjct: 126 SRIAKLKNGEFDAIILAMAGINRLNRSKDDKATLSINTI-PAMGQGALGI 174
>gi|257076597|ref|ZP_05570958.1| porphobilinogen deaminase [Ferroplasma acidarmanus fer1]
Length = 285
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 143/268 (53%), Gaps = 23/268 (8%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR S LAL A +S+ D + + + I ++ GD N L + G+F
Sbjct: 2 PVTIGTRNSKLALIQA----NSVKDALESRGYEVNIKSYTSAGDSNKNIPLYRMSSTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++++ GEID AVHSAKD+P+ + KGL+I+A R+D RDV IS T L+++
Sbjct: 58 VDELNERVLKGEIDLAVHSAKDIPSNIQKGLEITAVTGRDDFRDVLISRTP--LEEMTAG 115
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSS+RR + +I+V D RG I+TR++K K I++A A KR+K + +
Sbjct: 116 SVIGTSSMRRIRQAMTVNPEITVSDIRGNIDTRISKYTEKKYTGIIIAMAAYKRMKLD-I 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
IL+ E F P+P QG I I N+P A + IN +T+ + ER L+ C
Sbjct: 175 EHFILSEEQFLPAPNQGIIAIVGKSNSP-ASIISGEINDRETYRDMKNERFIATSLNLGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+ +L+ DGKI
Sbjct: 234 SMPVG---------------ILSKDGKI 246
>gi|15607651|ref|NP_215024.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Rv]
gi|31791692|ref|NP_854185.1| porphobilinogen deaminase [Mycobacterium bovis AF2122/97]
gi|121636428|ref|YP_976651.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660279|ref|YP_001281802.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|148821712|ref|YP_001286466.1| porphobilinogen deaminase [Mycobacterium tuberculosis F11]
gi|167970665|ref|ZP_02552942.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|215402275|ref|ZP_03414456.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|215410034|ref|ZP_03418842.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|215425741|ref|ZP_03423660.1| porphobilinogen deaminase [Mycobacterium tuberculosis T92]
gi|215429335|ref|ZP_03427254.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|215444616|ref|ZP_03431368.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|218752147|ref|ZP_03530943.1| porphobilinogen deaminase [Mycobacterium tuberculosis GM 1503]
gi|219556337|ref|ZP_03535413.1| porphobilinogen deaminase [Mycobacterium tuberculosis T17]
gi|224988900|ref|YP_002643587.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172]
gi|254230857|ref|ZP_04924184.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C]
gi|254549461|ref|ZP_05139908.1| porphobilinogen deaminase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185382|ref|ZP_05762856.1| porphobilinogen deaminase [Mycobacterium tuberculosis CPHL_A]
gi|260199512|ref|ZP_05767003.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|260203666|ref|ZP_05771157.1| porphobilinogen deaminase [Mycobacterium tuberculosis K85]
gi|289441896|ref|ZP_06431640.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|289446056|ref|ZP_06435800.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A]
gi|289552764|ref|ZP_06441974.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605]
gi|289568434|ref|ZP_06448661.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17]
gi|289573100|ref|ZP_06453327.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85]
gi|289744220|ref|ZP_06503598.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|289749005|ref|ZP_06508383.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92]
gi|289752545|ref|ZP_06511923.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|289756587|ref|ZP_06515965.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|289760632|ref|ZP_06520010.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503]
gi|294996019|ref|ZP_06801710.1| porphobilinogen deaminase [Mycobacterium tuberculosis 210]
gi|297632998|ref|ZP_06950778.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN 4207]
gi|297729974|ref|ZP_06959092.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN R506]
gi|298523991|ref|ZP_07011400.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|313657302|ref|ZP_07814182.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN V2475]
gi|54037281|sp|P64337|HEM3_MYCBO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54041348|sp|P64336|HEM3_MYCTU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158512923|sp|A1KFY6|HEM3_MYCBP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513358|sp|A5TZP0|HEM3_MYCTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800256|sp|C1AKJ0|HEM3_MYCBT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3261607|emb|CAB00957.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE
SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE)
[Mycobacterium tuberculosis H37Rv]
gi|31617278|emb|CAD93385.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE
SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE)
[Mycobacterium bovis AF2122/97]
gi|121492075|emb|CAL70538.1| Probable porphobilinogen deaminase hemC [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124599916|gb|EAY58926.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C]
gi|148504431|gb|ABQ72240.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|148720239|gb|ABR04864.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis F11]
gi|224772013|dbj|BAH24819.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172]
gi|289414815|gb|EFD12055.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|289419014|gb|EFD16215.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A]
gi|289437396|gb|EFD19889.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605]
gi|289537531|gb|EFD42109.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85]
gi|289542188|gb|EFD45836.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17]
gi|289684748|gb|EFD52236.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|289689592|gb|EFD57021.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92]
gi|289693132|gb|EFD60561.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|289708138|gb|EFD72154.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503]
gi|289712151|gb|EFD76163.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|298493785|gb|EFI29079.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|326902339|gb|EGE49272.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis W-148]
gi|328457228|gb|AEB02651.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
4207]
Length = 309
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 144/277 (51%), Gaps = 18/277 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGL 63
RIGTR S LA A R +L+ H+ ++ +ST+GDR ++ I G G+
Sbjct: 2 IRIGTRGSLLATTQAATVRDALI----AGGHSAELVTISTEGDR----SMAPIASLGVGV 53
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT + + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L +
Sbjct: 54 FTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPV 113
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL +
Sbjct: 114 GSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLD 173
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+
Sbjct: 174 DVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAG 233
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
C + + A S + DG++F E+S G
Sbjct: 234 CSAPVGAIAEVVES--------IDEDGRVFEELSLRG 262
>gi|153814114|ref|ZP_01966782.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756]
gi|317499921|ref|ZP_07958157.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087856|ref|ZP_08336781.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848510|gb|EDK25428.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756]
gi|316898638|gb|EFV20673.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330409551|gb|EGG88992.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 307
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 138/266 (51%), Gaps = 9/266 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ A + + + + II + T GD+I +R+L +GGKGLF
Sbjct: 5 IRIGSRESRLAVKQAEIIKDQIRRCDQTIL--VEIITMKTTGDKILDRSLESVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L G ID AVHS KDMP + I AY RED RDV I + + + S
Sbjct: 63 KELDQALADGRIDLAVHSLKDMPMEESSEFPILAYSRREDPRDVLIYKSEKKEQGTEEGS 122
Query: 126 -------VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
VIGTSS RR + + + RG I+TRL+KLN + A +LA AG+KR
Sbjct: 123 ILTKTGAVIGTSSKRRMIQIQKLYPNAVFQGIRGNIQTRLSKLNKEEYDAAVLAAAGVKR 182
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L E VI ++++ P+ GQG + ++ K + ++ + + ER+F+
Sbjct: 183 LNMEAVIGRYFSVDEVIPAAGQGILAVQGRKEFLKDTVWRQYVDDKKSRVQALAERSFIR 242
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGI 264
LDG C S A +A KG+ L G+
Sbjct: 243 VLDGGCTSPSAAYAKVKGNELELTGL 268
>gi|15839903|ref|NP_334940.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551]
gi|253797442|ref|YP_003030443.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
1435]
gi|254363472|ref|ZP_04979518.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str.
Haarlem]
gi|308231570|ref|ZP_07412948.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001]
gi|308369414|ref|ZP_07417699.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002]
gi|308370431|ref|ZP_07421471.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003]
gi|308371690|ref|ZP_07425840.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004]
gi|308372913|ref|ZP_07430371.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005]
gi|308374024|ref|ZP_07434556.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006]
gi|308375179|ref|ZP_07442991.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007]
gi|308376421|ref|ZP_07438780.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008]
gi|308377443|ref|ZP_07479182.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009]
gi|308378656|ref|ZP_07483377.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010]
gi|308379797|ref|ZP_07487609.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011]
gi|308395586|ref|ZP_07492111.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012]
gi|13880040|gb|AAK44754.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551]
gi|134148986|gb|EBA41031.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str.
Haarlem]
gi|253318945|gb|ACT23548.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
1435]
gi|308216828|gb|EFO76227.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001]
gi|308327689|gb|EFP16540.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002]
gi|308332040|gb|EFP20891.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003]
gi|308335827|gb|EFP24678.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004]
gi|308339432|gb|EFP28283.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005]
gi|308343307|gb|EFP32158.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006]
gi|308347203|gb|EFP36054.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007]
gi|308351144|gb|EFP39995.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008]
gi|308355775|gb|EFP44626.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009]
gi|308359835|gb|EFP48686.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010]
gi|308363637|gb|EFP52488.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011]
gi|308367292|gb|EFP56143.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012]
gi|323721187|gb|EGB30249.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis
CDC1551A]
Length = 312
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 144/277 (51%), Gaps = 18/277 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGL 63
RIGTR S LA A R +L+ H+ ++ +ST+GDR ++ I G G+
Sbjct: 5 IRIGTRGSLLATTQAATVRDALI----AGGHSAELVTISTEGDR----SMAPIASLGVGV 56
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT + + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L +
Sbjct: 57 FTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPV 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL +
Sbjct: 117 GSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLD 176
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+
Sbjct: 177 DVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
C + + A S + DG++F E+S G
Sbjct: 237 CSAPVGAIAEVVES--------IDEDGRVFEELSLRG 265
>gi|312200104|ref|YP_004020165.1| porphobilinogen deaminase [Frankia sp. EuI1c]
gi|311231440|gb|ADP84295.1| porphobilinogen deaminase [Frankia sp. EuI1c]
Length = 380
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 43/301 (14%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGLF 64
R+GTR S LALA + L I + ++ + T+GDR NR ++++G G++
Sbjct: 40 LRLGTRRSALALAQSGMVADELRTRLGI---EVDLVHVVTEGDR--NRAEISQLGSTGVW 94
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+SGE+D AVHS KD+PT +G+ ++A PRED+RDV +S T ++L L
Sbjct: 95 VSALREALLSGEVDLAVHSLKDLPTAPPEGITLAAIPPREDVRDVLVSPTGRTLAQLGPG 154
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT + RR A L + V+ RG ++TR+ K + + A++LA AG+ RL +
Sbjct: 155 ARIGTGAPRRAAQLRALGLGLDVVPIRGNVDTRIKKAIDGEVDAVVLARAGLARLDRLDA 214
Query: 185 IKEILNIEDFPPSPGQGAICIE-----------THVNNPKAQELVK-------------- 219
I E+L E P+PGQGA+ IE V P+ Q V
Sbjct: 215 ITELLEPEVMLPAPGQGALAIECVATTLAPLTLLTVGTPEDQGAVTGMSCPVAPGSGVEI 274
Query: 220 --------VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
V++ + +V ERAFLA ++ C + + A L G AS+G+
Sbjct: 275 PLERLLRFVLDDAPSSVAVRAERAFLAAIEAGCTAPVGALAQV----LPARGQAPASEGE 330
Query: 272 I 272
+
Sbjct: 331 V 331
>gi|167900391|ref|ZP_02487792.1| porphobilinogen deaminase [Burkholderia pseudomallei 7894]
Length = 245
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 136/229 (59%), Gaps = 2/229 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+L+++D P+ GQGA+ IE + ++ + +V ERA
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAV 242
>gi|84490120|ref|YP_448352.1| porphobilinogen deaminase [Methanosphaera stadtmanae DSM 3091]
gi|84373439|gb|ABC57709.1| HemC [Methanosphaera stadtmanae DSM 3091]
Length = 290
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 154/290 (53%), Gaps = 6/290 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LA +L ++ +I T GD+I N L I KG+FT+E
Sbjct: 3 VGTRGSKLATTQTKTVVKALEEITGEEIETKII---KTTGDKIKNSQLYNIDAKGIFTKE 59
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ LI G ID AVHS KD+P++L L I+A RE I +V IS+ S +L ++ +
Sbjct: 60 LDTALIDGSIDFAVHSFKDLPSELNDQLTITAIPQREAINEVLISN--YSWDELPENATL 117
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RR+A I RG I+TR+ K+ + A ++A AGI RL ++ IKE
Sbjct: 118 GTSSVRREAFCKLHGKKIQTKPIRGNIDTRIRKVEEGEYDATIMALAGINRLGLQEHIKE 177
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + + P GQGA+ + TH + + +++ +NHED+ E+A L + C+
Sbjct: 178 VFDEQYITPPAGQGALAVMTH-KDSEYNDVISKLNHEDSRIEAMTEKAILETIGVGCQWP 236
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
I + G+ + + +L+ +GK+ +V++ ++ +AIN + +R
Sbjct: 237 IGIVSKVDGNNINIHCKLLSPEGKLLADVNKTTDKNNAINTAKVIGTKLR 286
>gi|305433096|ref|ZP_07402252.1| hydroxymethylbilane synthase [Campylobacter coli JV20]
gi|304443797|gb|EFM36454.1| hydroxymethylbilane synthase [Campylobacter coli JV20]
Length = 308
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 6/293 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + L H I + + TKGD + + L +IGGKGL
Sbjct: 2 KELVIATRKSQLALWQSEFIADFLNKTHGIA---VRLEGFKTKGDVLLDSPLAKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 FTKELEESMLRNEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +K
Sbjct: 119 GAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLDK 178
Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + ++ P+ QGA+ IE+ +++ K + +K +N ++ ER F++ L+
Sbjct: 179 QVNFVYTFSKDELIPAASQGALGIES-IDDEKFLKFLKCLNDDNALIETTIEREFISTLE 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
G C+ I A G + I+ DG + R + D G A+
Sbjct: 238 GGCQVPIGINAELLGDEICVRAILGLPDGSEILKEKRMIKKSDFKGFGESLAK 290
>gi|163754811|ref|ZP_02161933.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1]
gi|161325752|gb|EDP97079.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1]
Length = 526
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 143/268 (53%), Gaps = 8/268 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L + H ++P+ GD + ++ L E+G G+
Sbjct: 3 KRIRIGTRDSELALWQAKVVQEQL----EFLGHKTELVPVKATGDLVLDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT ++ +++ +ID AVHS KD+PT L KG+ +A L R ++RD + +
Sbjct: 59 FTRTLDIAMLNNDIDIAVHSLKDVPTILPKGIVQAAVLKRGNVRDTLVFKNNEEFLS-QR 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKKE 182
++VI T SLRRKA L ++ D RG + TRL KL + + + + A AG+ R+
Sbjct: 118 NAVIATGSLRRKAQWLHRYPTHTIEDLRGNVNTRLQKLADTEHWNGAIFAAAGLGRIGLR 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+E +N+E P+P QGAI I + + + + INHE+T + ER FL L+G
Sbjct: 178 P--EESVNLEWMIPAPAQGAIMITALEADEEIRAICAEINHEETEICTSIERKFLNLLEG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C + I AY K + G++L++DG
Sbjct: 236 GCTAPIGAIAYIKDEVVTLEGVLLSTDG 263
>gi|167737626|ref|ZP_02410400.1| porphobilinogen deaminase [Burkholderia pseudomallei 14]
Length = 246
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 136/229 (59%), Gaps = 2/229 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+L+++D P+ GQGA+ IE + ++ + +V ERA
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAV 242
>gi|195014661|ref|XP_001984055.1| GH15218 [Drosophila grimshawi]
gi|193897537|gb|EDV96403.1| GH15218 [Drosophila grimshawi]
Length = 612
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG K
Sbjct: 8 KVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGEKS 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + + ++
Sbjct: 65 LFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTIA 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SVIGTSSLRR A + R D+ V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 125 NLPKGSVIGTSSLRRTAQIRRQYPDLIVCDIRGNLNTRLAKLDAKDSKFAGIILAQAGLV 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+FL
Sbjct: 185 RMGWMARISQVLEPTDLLYAVGQGALAVECRANDNQVLGMLQKLMCLNTTCRILAERSFL 244
Query: 238 AELDGSCKSAIAGFAYCKG 256
L G C + +A ++ G
Sbjct: 245 KTLGGGCSAPVAVWSNLNG 263
>gi|217073904|gb|ACJ85312.1| unknown [Medicago truncatula]
Length = 243
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 117/183 (63%), Gaps = 4/183 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L+ H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 62 IRIGTRGSPLALAQAHETRDKLIASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 181
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ +L +SV D FRG ++T L + + + L+ + +RL
Sbjct: 182 GSVIGTASLRRKSQILHRYPSLSVQDNFRGNVQTSL-ETSGGGCQSYLIGSSWTERLNMT 240
Query: 183 KVI 185
+++
Sbjct: 241 EML 243
>gi|154496817|ref|ZP_02035513.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC
29799]
gi|150274069|gb|EDN01169.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC
29799]
Length = 287
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 140/264 (53%), Gaps = 16/264 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSL-MDVHKI--PPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIG+R S LA+ T+S L M+ + P + ++ + T GD+I +RTL ++GGKG
Sbjct: 3 LRIGSRESVLAV-----TQSELVMEAIRAFDPSIELELVTMKTTGDKILDRTLDKVGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E++ L+ G +D VHS KD+P + L ++ + RED RD + ++ D +
Sbjct: 58 LFVRELDAALLEGRVDITVHSCKDLPMETDPRLPLAGFSKREDPRDALVLPAGKTELDPS 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L IG +S RR L D+ V RG ++TRL KL+ + A++LA AG+KRL E
Sbjct: 118 LP--IGCASRRRAIQLAALYPDMEVAPVRGNVQTRLRKLDEGQYSALVLASAGLKRLGLE 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+ P+ GQG + ++T N P L V + E T ++ ERAF+ L
Sbjct: 176 GRIARYFTAEEMIPAAGQGILAVQTRAGENYPC---LAAVTDREGTICAL-AERAFVRML 231
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI 264
DG C S +A G TL G+
Sbjct: 232 DGGCSSPVAAHGVVDGDTLILTGM 255
>gi|50954011|ref|YP_061299.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|55976376|sp|Q6AHF1|HEM3_LEIXX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|50950493|gb|AAT88194.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 329
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 10/270 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLA+A +T++ V + +I ++ ++T GD + +L+E+GG G+F
Sbjct: 15 LRVGTRGSPLAVA---QTQAVSAAVARATGFDIELVTVTTHGD-TSRESLSELGGTGVFA 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L +GE D VHS KD+PT GL + A R D RD + +L +
Sbjct: 71 TALRDALRNGECDLVVHSLKDLPTAPAPGLVLGAVPKRADARDTLCARDGLRFGELPEGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L R + ++D RG ++TRL++++ A++LA AG+ RL +
Sbjct: 131 SVGTGSPRRAAQLRAQRPGLDIVDIRGNVDTRLSRVSAGDLDAVVLAAAGLGRLGRLDAA 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNN-----PKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ P +PGQGA+ +E + P A+ L V +H T + ERA LA L
Sbjct: 191 TDFFSLSTMPTAPGQGALALEVREGDERGRGPIARALAAV-DHATTCAATTAERAVLAGL 249
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+ C + + A L+ V DG
Sbjct: 250 EAGCAAPVGATAMIDDGLLFLTATVYRPDG 279
>gi|226361138|ref|YP_002778916.1| porphobilinogen deaminase [Rhodococcus opacus B4]
gi|226239623|dbj|BAH49971.1| porphobilinogen deaminase [Rhodococcus opacus B4]
Length = 321
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 16/288 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LA A R +L+ H+ ++ + TKGD+ + ++ +IG G+
Sbjct: 7 RTLRIGTRGSELATTQAGTVRDALISAG----HDAELVIIKTKGDQ-SMESVEKIG-VGV 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ L +L
Sbjct: 61 FTAELREALADGRVDVAVHSYKDLPTARDERFTIAAIPPREDPRDALVARDGLVLGELPP 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 121 GSKVGTSAPRRTSQLRALGLGLDILPLRGNLQRRLGKVESGELDAVVLARAGLARIGRLD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+I E L P+P QGA+ +E N ++ ++ ++ +V ERA LAEL+
Sbjct: 181 LITESLEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALLAELEAG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
C + + A S L DG+IF E+S G C A G D
Sbjct: 241 CTAPVGAIAEVVES--------LDDDGRIFDELSVRG--CAAAIDGSD 278
>gi|124805668|ref|XP_001350505.1| porphobilinogen deaminase [Plasmodium falciparum 3D7]
gi|23496628|gb|AAN36185.1| porphobilinogen deaminase [Plasmodium falciparum 3D7]
gi|70780284|gb|AAZ08393.1| porphobilinogen deaminase [Plasmodium falciparum]
Length = 435
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 173/358 (48%), Gaps = 59/358 (16%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITN-RTLTEIGGKGLF 64
IGTR SPLAL + + R +M K NI + + T GD I + +++ GGKG+F
Sbjct: 64 IGTRDSPLALKQSEKVRKKIMSYFKKMNKNINVTFKYIKTTGDNILDSKSVGLYGGKGIF 123
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122
T+E++++LI+G +D VHS KD+P L +++S +L R+ I D F+S +S+ D+
Sbjct: 124 TKELDEQLINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFLSIKYKSINDMNTV 183
Query: 123 --------LHSV--------------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
+H + IGTSSLRR++ + +I V + RG I TR+ K
Sbjct: 184 KSVSKTEDIHHINKKDSDHNNDTLCTIGTSSLRRRSQIKNRYKNIYVNNIRGNINTRIEK 243
Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEIL---------------------------NIED 193
L N + A+++A GI+RL K+ +K +L NI+
Sbjct: 244 LYNGEVDALIIAMCGIERLIKKANLKHLLKNKEQKNICQPFLLKCNNKKCIDLCHVNIQK 303
Query: 194 FP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
P+ GQG I + +H N L+K IN++ + ER+FL +DG+C I
Sbjct: 304 LNKNLIYPALGQGIIAVTSHKKNYFISSLLKNINNKKSEMMAQIERSFLYHIDGNCMMPI 363
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G+ + +Y + I+ G ++V++ + IG +AA ++ I FN
Sbjct: 364 GGYTNMRNEDIYLHVIINDIHGYNKYQVTQKDTLYNYKEIGPNAAIKMKEIIGTEQFN 421
>gi|54027143|ref|YP_121385.1| porphobilinogen deaminase [Nocardia farcinica IFM 10152]
gi|61213309|sp|Q5YP70|HEM3_NOCFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54018651|dbj|BAD60021.1| putative porphobilinogen deaminase [Nocardia farcinica IFM 10152]
Length = 346
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 14/276 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R +L+ + P +V++ T GD +++ + +IG G+F
Sbjct: 9 PLRIGTRGSLLAMTQAGTVRDALIAAGR--PAELVVV--KTPGD-MSSDPVQKIG-VGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + +L +G ID AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 63 TSALRDELAAGTIDLAVHSYKDLPTAPDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 122
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR A L + ++ RG +++RL ++ + + A+++A AG+ R+ + V
Sbjct: 123 AKVGTSAPRRVAQLRALGLGLDIVPLRGNLDSRLARVTDGELDAVVVARAGLSRIGRTAV 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L P+P QGA+ +E + E + ++ T +V ERA LAEL+ C
Sbjct: 183 ITEALEPVQMLPAPAQGALAVECRSEDAALIEALAELDDAATRAAVVAERALLAELEAGC 242
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S L DG+I E+S G
Sbjct: 243 TAPVGALAEVVES--------LDDDGRIVEELSLRG 270
>gi|72163131|ref|YP_290788.1| porphobilinogen deaminase [Thermobifida fusca YX]
gi|123747085|sp|Q47LA7|HEM3_THEFY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71916863|gb|AAZ56765.1| hydroxymethylbilane synthase [Thermobifida fusca YX]
Length = 320
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 143/273 (52%), Gaps = 6/273 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P R+GTR S +A + L +P + ++ +++ GD IT LT++GG
Sbjct: 1 MSTTPARLGTRRSTMATNQSRRVAEILTARTGVP---VELVLITSFGD-ITRAHLTQLGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L++GE++ AVHS KD+PT +G+ ++A R+D RD + D
Sbjct: 57 TGVFVSALRDALLAGEVEFAVHSLKDLPTAPTEGIVLAAVTERDDPRDALCARDGLKFAD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+
Sbjct: 117 LPPGATVGTGSPRRVAQLAALRPDLRYVPIRGNAETRLGKVASGELDAVVLAYAGLHRVG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + ++ +++ P+PGQGA+ +E + + ++H T +V ER LAE
Sbjct: 177 RLDDVTDVFDVDQVLPAPGQGALAVECRTADFTGPLRYLTAVDHLPTRAAVTAERVILAE 236
Query: 240 LDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGK 271
L+ C + + +A + L V+A+DG
Sbjct: 237 LEAGCAAPVGAYAEFVAEDRLRLRAAVVATDGS 269
>gi|288920172|ref|ZP_06414488.1| porphobilinogen deaminase [Frankia sp. EUN1f]
gi|288348422|gb|EFC82683.1| porphobilinogen deaminase [Frankia sp. EUN1f]
Length = 395
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ ++P R+GTR S LALA + +L + ++P+ T GDR + +++IGG
Sbjct: 19 LTRRPLRLGTRRSALALAQSGHVAEALRARLGC---QVELVPIVTDGDR-SQGAISQIGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+SGEID AVHS KD+PT GL ++A PR D RDV +S + + L
Sbjct: 75 TGVFVSALREALLSGEIDLAVHSLKDLPTATPDGLVLAAVPPRVDTRDVLVSPSGRGLVK 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++ IGT + RR A L V+ RG ++TR+ K + + A++LA+AG+ RL
Sbjct: 135 LGPNARIGTGAPRRAAQLRAMGLGFDVVPIRGNVDTRIKKAIDGEVDAVILAHAGLARLD 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIE 206
+ + EI+ E P+PGQGA+ IE
Sbjct: 195 RLDAVTEIIPSEVILPAPGQGALAIE 220
>gi|163839970|ref|YP_001624375.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209]
gi|162953446|gb|ABY22961.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209]
Length = 290
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 145/252 (57%), Gaps = 5/252 (1%)
Query: 23 TRSSLM--DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCA 80
T+S L+ + I + ++ + T GD +T L+++GG G+F + + +++G +D A
Sbjct: 4 TQSQLIADQLSAIGGFEVELVQIRTDGDVLTG-PLSQMGGTGVFVTALREAVLNGSVDFA 62
Query: 81 VHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLR 140
VHS KD+PT G++I+A R ++RD S + +SL +LA + +GT S RR A L
Sbjct: 63 VHSLKDLPTAAAPGMKIAAIPARAEVRDALCSRSNRSLAELATGAKVGTGSPRRAAQLRA 122
Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ 200
R+DI VID RG ++TRL +L N+ A++LA AG+ R+ + I E+ + P+PGQ
Sbjct: 123 ARADIEVIDIRGNVDTRLARLENDL-DAVVLAAAGLGRIGRSAAISELFDDAVMLPAPGQ 181
Query: 201 GAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259
GA+ +ET ++ P + + I+ D+ +V ERA LA L+ C + + FA KGS L
Sbjct: 182 GALAVETALDVPTELAAALAAIDDADSRLAVTAERALLARLEAGCSAPVGAFAQRKGSML 241
Query: 260 YFYGIVLASDGK 271
+ + DG
Sbjct: 242 RLEACICSLDGS 253
>gi|302521073|ref|ZP_07273415.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
gi|318061890|ref|ZP_07980611.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG]
gi|318078097|ref|ZP_07985429.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF]
gi|302429968|gb|EFL01784.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
Length = 323
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 23/297 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59
M KP R+GTR S LA+A + ++ + P + ++ ++T GD T+R L IG
Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VELVEITTYGD--TSREHLARIG 55
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + L+ G++D AVHS KD+PT +GL ++A RED RD I+ +L+
Sbjct: 56 GTGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLE 115
Query: 120 DLALHSVIGTSSLRRKALL-LRWRS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L + IGT S RR A L R+ DI + RG ++TR+N + + + A++LA AG
Sbjct: 116 RLPRGARIGTGSPRRMAQLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAG 175
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + + L + P+PGQGA+ +E P A+ L + ++ T +V ERA
Sbjct: 176 LNRLGRGGEVTAYLASDTVLPAPGQGALAVECP-PGPLAEALAR-LDDPRTRAAVTAERA 233
Query: 236 FLAELDGSCKSAIAGFAYCKGST-----------LYFYGIVLASDGKIFHEVSRNGN 281
LA L+ C + + A G+ + G+V ++DG +++ G+
Sbjct: 234 LLATLEAGCSAPVGALADFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGH 290
>gi|195127549|ref|XP_002008231.1| GI11928 [Drosophila mojavensis]
gi|193919840|gb|EDW18707.1| GI11928 [Drosophila mojavensis]
Length = 632
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 144/264 (54%), Gaps = 15/264 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60
++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 6 KEKVIRVGSRKSELAL---IQTKHVVGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------SHT 114
K LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + HT
Sbjct: 63 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLREHLKGHT 122
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172
SL SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA
Sbjct: 123 IASLPK---GSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKDSKFSGIILA 179
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ R+ I ++L D + GQGA+ +E N+ +++ + +T +
Sbjct: 180 QAGLVRMGWMNRISQVLEPTDLLYAVGQGALAVECRANDAHVLGMLQRLMCLNTTCRILA 239
Query: 233 ERAFLAELDGSCKSAIAGFAYCKG 256
ER+FL L G C + +A ++ KG
Sbjct: 240 ERSFLKTLGGGCSAPVAVWSKLKG 263
>gi|298252253|ref|ZP_06976056.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963]
gi|297546845|gb|EFH80713.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963]
Length = 334
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 146/280 (52%), Gaps = 16/280 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LA+ +T+ + +H+ P I I + T GDR+T+ L+ IGG G
Sbjct: 5 KRITIGTRASKLAM---IQTQWIIERIHQQWPGLEIAIEQIRTTGDRVTSVPLSRIGGDG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ-- 116
+F EIE L ID AVHS KD+PT +GL + PRED+RDV +S H +
Sbjct: 62 VFVTEIESALQERRIDIAVHSLKDLPTAQPEGLCVLTPGPREDVRDVLVSKGDLHISARG 121
Query: 117 SLKDLALHSV--IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+L+ + IGT SLRR A + D ++ RG ++TRL KL + AI+LA A
Sbjct: 122 TLEGITPGRAPRIGTCSLRRTAQIRHLCPDAEILSLRGNVDTRLRKLEAGEYDAIILAAA 181
Query: 175 GIKRLKKEKVIKEILN---IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
G+ RL + ++ L+ + P+PGQGA+ +E + P +EL+ + + + +
Sbjct: 182 GLHRLDLQGTLEGKLSYFPVAQMLPAPGQGALGLEIR-DEPAFRELLAPLQDRNVQAATS 240
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
ER F+ L C +A A+ L G+V + DG+
Sbjct: 241 AERMFMRRLGAGCYLPVAAHAHIIDERLVLRGLVTSLDGQ 280
>gi|227545398|ref|ZP_03975447.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A]
gi|300908522|ref|ZP_07125985.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112]
gi|112944692|gb|ABI26362.1| porphobilinogen deaminase [Lactobacillus reuteri]
gi|227184680|gb|EEI64751.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A]
gi|300893929|gb|EFK87287.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112]
Length = 305
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LA+A +SL ++ P I + T+GDR +L +IGGKG+F +E
Sbjct: 7 VGSRKSKLAMAQTKLVIASLKEL--FPTTQFEIKNVITEGDRNQQASLAKIGGKGVFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126
IE++L + ID AVHS KD+ L L + A+ R D +S SL L +
Sbjct: 65 IEEELKNCTIDFAVHSLKDVMPVLPDELTLGAFPKRVSPFDCLVSRQEFTSLDALPHGAR 124
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT+SLRR+ LL R D+ +I RG I+TRL K++ ++LA AG+ RL +
Sbjct: 125 IGTNSLRRQGQLLNVRPDLKIIPIRGNIDTRLKKIDTENLAGVVLAEAGLDRLSIDLSSY 184
Query: 187 EILNIED-FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+++D P+ GQG + IE + + ++++ IN + ++ ER F+ EL GSC
Sbjct: 185 HQLSLKDIIVPAVGQGCLAIECRKADERVRKMLDQINDPQSAKCIHIEREFMRELGGSCN 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNR 282
I G AY + + F G++ + +G+ + EV+ N+
Sbjct: 245 FPIGGHAYLQDQQIVFDGLIASPNGEHLIKEVAVPANK 282
>gi|291563543|emb|CBL42359.1| porphobilinogen deaminase [butyrate-producing bacterium SS3/4]
Length = 827
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 139/264 (52%), Gaps = 9/264 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
++++ RIGTR S LAL ++ P ++PL TKGD+I +L GG
Sbjct: 4 IKRRTIRIGTRKSRLALVQTKMVAEAIE--ASCPEAKCELVPLMTKGDKILKTSLVAFGG 61
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG F EE E+ L++G+ID AVHSAKDMP L GL I A L RED RDVF++ ++ +
Sbjct: 62 KGAFVEEFEQSLLNGDIDLAVHSAKDMPMDLSDGLCIGAVLKREDPRDVFVTVKGRTPER 121
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL- 179
+IGT S RR+ ++ D+ RG ++TRL KL + I+LA AG+ RL
Sbjct: 122 SP--RIIGTGSPRRQVQIME-HGDMECRLLRGNVDTRLEKLYQGEYDGIILAAAGLNRLG 178
Query: 180 --KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ E L E F P+ GQG I +E + +++K +N ++ ++ ER L
Sbjct: 179 LFNDPRFSFEFLEPEMFLPAGGQGIIAVEAK-KGSEVLKILKKLNDKEAERALFAERKVL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYF 261
L C +A+ +A + T +
Sbjct: 238 RLLGAGCTAAVGVYAKEENGTFWM 261
>gi|257063872|ref|YP_003143544.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476]
gi|256791525|gb|ACV22195.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476]
Length = 318
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 132/268 (49%), Gaps = 5/268 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F IGTR S LAL ++M P + I +T GD L EIG KGLFT
Sbjct: 5 FVIGTRGSKLALWQTETVGRAIM--RAFPEIEVEIRVRNTTGDINLASPLAEIGDKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
E+E L+ GE+D VHS KD+ T+ +G ++ LPR D RDV + A SL ++
Sbjct: 63 RELETDLLLGEVDMCVHSLKDLETEQPEGCVVAGVLPRADARDVLVCGPRIQAASLAEVP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S IGT S RR A L ++ RG ++TR+ K + +LA AG+KR+ E
Sbjct: 123 EGSRIGTGSRRRVAQLKANFPNMVPEGIRGNVDTRVAKAEGDDYEGAILAAAGMKRMGYE 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I L IED P+PGQGAI +E N +A ++ + +N T + ER L L+G
Sbjct: 183 DHIAAYLPIEDMIPAPGQGAIAMEVLKKNERAYQIARALNDPVTKACTDAERFVLFSLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C + I + F VL+ G
Sbjct: 243 GCSAPIGAHCRLEDGKYIFDACVLSLGG 270
>gi|119713318|gb|ABL97382.1| porphobilinogen deaminase [uncultured marine bacterium EB80_02D08]
Length = 300
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 7 RIGTRCSPLALAHAF----ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+I TR S LA+ A E + S+ DV + +IP++++GD+ TN+ L EIGGKG
Sbjct: 4 KIATRQSELAMYQANFVANEIKKSIKDVE------VELIPMTSEGDQ-TNKPLHEIGGKG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E L S ++D AVHS KD+P +L +I RE D+ +S +S D
Sbjct: 57 LFISTLESALESNKVDIAVHSLKDVPARLDPKFKIINVFKRESPSDLLLSKDGKSFSDFL 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ IGTS RRKA + R DI I RG I TR+NKLN +++A A I RL +
Sbjct: 117 ENATIGTSGPRRKAQINYLRPDIKTIPVRGNIATRINKLNEGYFDGLVVAKAAINRLGLQ 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E +I++ P+ QG I E +N + E ++ I N ER+F+A +DG
Sbjct: 177 QNSYE-FSIDEMLPAASQGHIATECLSSNKEIIETLESIGDSKELILANAERSFVASMDG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C S IA + G VL+ G
Sbjct: 236 GCLSPIAILCQNFNDEIKVIGKVLSYKG 263
>gi|118619687|ref|YP_908019.1| porphobilinogen deaminase [Mycobacterium ulcerans Agy99]
gi|158512390|sp|A0PW29|HEM3_MYCUA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118571797|gb|ABL06548.1| porphobilinogen deaminase HemC [Mycobacterium ulcerans Agy99]
Length = 314
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 139/275 (50%), Gaps = 14/275 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAAIVRDALIANG----HAAELVTISTLGDR--SSAPIETLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A + + RG ++TRLN+++N AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQFRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + +G++F E+S G
Sbjct: 236 APVGAIAEVVES--------IDEEGRVFEELSLRG 262
>gi|256833700|ref|YP_003162427.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603]
gi|256687231|gb|ACV10124.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603]
Length = 344
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 20/261 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A + T + + + + + + T GD +T +L +GG G+F
Sbjct: 4 LRLGTRASALATAQSRATAALIAQATGV---TVDLTHIRTDGDVLTG-SLATMGGAGVFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
I + L++G+ID AVHS KD+PT +G I +P RE+ +D S +SL L
Sbjct: 60 TAIRQALLAGDIDIAVHSLKDLPTTPHEGTTI--IVPERENPQDALCSRHGESLAHLPHG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---NNNKAH------AILLAYAG 175
+++GT S RR A LL R D+ ++D RG ++TRL ++ +K H A++LA AG
Sbjct: 118 ALVGTGSPRRAAQLLVARPDLRIVDIRGNVDTRLARVGLSTADKPHIRNDLDAVVLAAAG 177
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----NPKAQELVKVINHEDTWDSVN 231
++RL + VI E+L P+PGQGA+ IE + +P ++ ++H+ T +V
Sbjct: 178 LRRLGRAHVISELLPPTSMLPAPGQGALAIEVRHDMADHHPSILAGIRTLHHQPTAYAVA 237
Query: 232 CERAFLAELDGSCKSAIAGFA 252
ERA L L+ C + + A
Sbjct: 238 AERAVLRHLEAGCAAPVGALA 258
>gi|195376491|ref|XP_002047030.1| GJ12153 [Drosophila virilis]
gi|194154188|gb|EDW69372.1| GJ12153 [Drosophila virilis]
Length = 618
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60
++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG
Sbjct: 6 KEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
K LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + + +
Sbjct: 63 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHT 122
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ L SVIGTSSLRR A + R + V D RG + TRL KL+ +K I+LA AG
Sbjct: 123 IATLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKESKFAGIILAQAG 182
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+
Sbjct: 183 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDAHVLTMLQKLMCLNTTCRILAERS 242
Query: 236 FLAELDGSCKSAIAGFAYCKG 256
FL L G C + +A ++ KG
Sbjct: 243 FLKTLGGGCSAPVAVWSNLKG 263
>gi|312888384|ref|ZP_07747960.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603]
gi|311299218|gb|EFQ76311.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603]
Length = 526
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 142/260 (54%), Gaps = 24/260 (9%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A ++ L + I+ T+GDRI N + ++ GKG FT+E
Sbjct: 8 IGTRGSELALWQANFVKNKLAENGIQADLKII----KTQGDRILNLSFDKLEGKGFFTKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRED-------IRDVFISHTAQSLKD 120
+E++L++G ID AVHS KD+PT+ GL I+A RED ++D H S+K
Sbjct: 64 LEEELLAGTIDLAVHSHKDLPTENPPGLTIAAVSEREDPAELLLVLKDCVDVHQKLSVK- 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
++GTSS RRKA LL R D+ + + RG + TR+NKL N AI++A AG+ RL
Sbjct: 123 --YGGIVGTSSNRRKAQLLAVRPDLEIDELRGNVPTRINKLRNEDYDAIMIAKAGVVRLG 180
Query: 181 KEKVIKEILNIEDFPPS-----PGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ + E ++E+ PP+ P QG + I+ + + E ++++NH D + + ER+
Sbjct: 181 LD--MSE-FHVEEIPPTELIPAPAQGVLAIQVREADTELFEALQILNHPDVAEELAVERS 237
Query: 236 FLAELDGSCKSAIAGFAYCK 255
L G C + YC+
Sbjct: 238 LLKLFGGGCHLPLG--CYCR 255
>gi|126433281|ref|YP_001068972.1| porphobilinogen deaminase [Mycobacterium sp. JLS]
gi|126233081|gb|ABN96481.1| hydroxymethylbilane synthase [Mycobacterium sp. JLS]
Length = 314
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 14/276 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ +ST+GDR + +IG G+F
Sbjct: 7 PIRIGTRASLLATTQAGTIRDALIGRG----HAAELVLISTEGDR-NQGPIADIG-VGVF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + + + G +D AVHS KD+PT + I A RED RD ++ L +L
Sbjct: 61 TAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVLGELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R+ +
Sbjct: 121 STVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLARIGRLGD 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L P+P QGA+ +E + L+ ++ DT +V ER LAEL+ C
Sbjct: 181 VTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLAELEAGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + DG++F EVS G
Sbjct: 241 SAPVGAIAEVVES--------IDEDGRVFEEVSLRG 268
>gi|167814759|ref|ZP_02446439.1| porphobilinogen deaminase [Burkholderia pseudomallei 91]
Length = 240
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 135/227 (59%), Gaps = 2/227 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+L+++D P+ GQGA+ IE + ++ + +V ER
Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAER 240
>gi|304315023|ref|YP_003850170.1| porphobilinogen deaminase [Methanothermobacter marburgensis str.
Marburg]
gi|302588482|gb|ADL58857.1| porphobilinogen deaminase [Methanothermobacter marburgensis str.
Marburg]
Length = 289
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 148/286 (51%), Gaps = 6/286 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LAL +T + + +I I + TKGDRI + L + +GLFT E+
Sbjct: 4 GTRGSRLAL---VQTDHVIDMLSEICGERIERRIIKTKGDRIKDSQLYSMDSRGLFTREL 60
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ ++ E+D AVHS KD+P+ L L I+A PRE +V +S +L + +G
Sbjct: 61 DIAVLEEEVDFAVHSLKDVPSDLDPELVIAAVPPRESPNEVLVSRF--DWDELPPAAKLG 118
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSSLRR+A + + + RG I+TR+ K+ + HA ++A AG+KRL E IK+
Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMEGEVHATIMAEAGLKRLGLENYIKKR 178
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
+E F P+ GQGA+ + T ++ + K I H + V E+ L EL C+ +
Sbjct: 179 FTLEYFTPAAGQGALAVITRRDSELMVSIEK-ITHYPSHQEVTAEKTLLRELGAGCQCPL 237
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
A + Y ++L DG+I V+ G+ A IG+ AA+
Sbjct: 238 GVIARASDGKINLYAVLLTRDGEILKRVNVKGSVDKAEEIGKKAAK 283
>gi|256820282|ref|YP_003141561.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271]
gi|256581865|gb|ACU93000.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271]
Length = 288
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 144/266 (54%), Gaps = 7/266 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A ++ L K + I+ + GD ++ L E+G G+FT
Sbjct: 4 IRIGTRDSELALWQAKTVQNQL----KTLGYPTEIVSTKSHGDIELSKPLYEMGVTGIFT 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ ++ L++GEID AVHS KD+PT L +G+ + A L R + DV + S + + +
Sbjct: 60 KALDIALLNGEIDIAVHSMKDVPTALPEGIAVGAVLKRGNPHDVLVYKGDLSFLEAEI-A 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K+
Sbjct: 119 TIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERIN--KLP 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ L ++ P+P QGAI + +N Q+ + ++ + T+ + ER FL L+G C
Sbjct: 177 EKHLVLDWMLPAPAQGAIVVVVREDNVALQKKLLPLHDDYTYIATQLERDFLRALEGGCT 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
+ I FA K LYF G + + DGK
Sbjct: 237 APIGAFAEFKDDKLYFKGGLWSEDGK 262
>gi|108797657|ref|YP_637854.1| porphobilinogen deaminase [Mycobacterium sp. MCS]
gi|119866744|ref|YP_936696.1| porphobilinogen deaminase [Mycobacterium sp. KMS]
gi|108768076|gb|ABG06798.1| hydroxymethylbilane synthase [Mycobacterium sp. MCS]
gi|119692833|gb|ABL89906.1| hydroxymethylbilane synthase [Mycobacterium sp. KMS]
Length = 314
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 14/276 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ +ST+GDR + +IG G+F
Sbjct: 7 PIRIGTRASLLATTQAGTIRDALIARG----HAAELVLISTEGDR-NQGPIADIG-VGVF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + + + G +D AVHS KD+PT + I A RED RD ++ L +L
Sbjct: 61 TAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVLGELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R+ +
Sbjct: 121 STVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLARIGRLGD 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L P+P QGA+ +E + L+ ++ DT +V ER LAEL+ C
Sbjct: 181 VTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLAELEAGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + DG++F EVS G
Sbjct: 241 SAPVGAIAEVVES--------IDEDGRVFEEVSLRG 268
>gi|319956650|ref|YP_004167913.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511]
gi|319419054|gb|ADV46164.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511]
Length = 317
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 140/242 (57%), Gaps = 2/242 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A+ + + P + ++ ++++GD+I +R L +GGKG FT+E
Sbjct: 6 IVTRASQLALWQAYHIKDRIEKAR--PELEVELMEITSRGDKILDRPLALVGGKGHFTKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E ++++G AVHS KD+PT + +GL+++A R+D DVF+SH SL+ L +V+
Sbjct: 64 LEDEMLAGRAQMAVHSLKDVPTFIPEGLELAAITERQDQSDVFLSHRFSSLEALPEGAVV 123
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LAY G+ RL K I
Sbjct: 124 GTTSLRRRMQLLQRRPDLIVKDLRGNVNTRLRKLAEGQYDAIILAYIGLARLDLLKEIPH 183
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ +E P GQ A+ IE + + + L ++ +T ER F+A + C +
Sbjct: 184 VQKLEWMIPPMGQAALGIEILSGDEELRHLAMELDDPETHLCTEIEREFVAAVGAGCSAP 243
Query: 248 IA 249
+A
Sbjct: 244 VA 245
>gi|256380712|ref|YP_003104372.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827]
gi|255925015|gb|ACU40526.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827]
Length = 313
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 17/308 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LALA +L + + I+ +ST GDR ++ + EIG G+
Sbjct: 3 RTLRIGTRGSALALAQTGTVAEAL----RAAGAQVEIVTVSTPGDR-SHAPIAEIG-IGV 56
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L
Sbjct: 57 FTSALRDALAHGEVDVAVHSYKDLPTAPDTRLSLAAIPQREDPRDALVARDGLTLGELPP 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S +GT S RR L + ++ RG I++R+ ++ + + A++LA AGI RL + +
Sbjct: 117 GSKVGTGSPRRATQLAALGLGLEILPIRGNIDSRMARVFDGELDAVVLARAGISRLGRVE 176
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDG 242
I E+L+ P+P QGA+ IE V++ + L++ ++ + +V ERA LA L+
Sbjct: 177 NITEVLDPIQMLPAPAQGALAIECRVDDVDTEHLLRSTLDDSASRAAVTAERAMLAALEA 236
Query: 243 SCKSAIAGFAYC------KGSTLY---FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + + A +G+ + G+V A DG + S G+ A +GR A
Sbjct: 237 GCSAPVGALADVVEDLDDEGAAVLRISLRGVVAAEDGDLLR-ASATGDLTAAEELGRALA 295
Query: 294 QYIRFISN 301
+ +S
Sbjct: 296 AELLDLSG 303
>gi|291615715|ref|YP_003518457.1| HemC [Pantoea ananatis LMG 20103]
gi|291150745|gb|ADD75329.1| HemC [Pantoea ananatis LMG 20103]
Length = 244
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 120/218 (55%)
Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS 131
++ D AVHS KD+P +GL + R+D RD F+S+ S+ +L +VIGTSS
Sbjct: 1 MLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDELPQGAVIGTSS 60
Query: 132 LRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNI 191
LRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL I++ L
Sbjct: 61 LRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLGLADRIRQPLPA 120
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251
+ P+ GQGA+ IE +++ L++ +NH+DT V ERA L+G C+ I F
Sbjct: 121 DISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVKAERAMNTRLEGGCQVPIGSF 180
Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
A +G L+ G+V A DG + R G R A +G
Sbjct: 181 AVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMG 218
>gi|329936060|ref|ZP_08285860.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045]
gi|329304538|gb|EGG48416.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045]
Length = 323
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 158/311 (50%), Gaps = 23/311 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59
M ++ R+GTR S LA+A + + ++ +V P + ++ ++T GD T+R L +IG
Sbjct: 1 MTEQALRLGTRRSKLAMAQSGQVADAVGEVTGRP---VELVEITTYGD--TSREHLAQIG 55
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + + L+ GE+D AVHS KD+PT + L ++A RED RDV I+ +
Sbjct: 56 GTGVFVAALREALLRGEVDLAVHSLKDLPTTQPEELTLAAVPLREDPRDVLIARDGLAFA 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
DL + +GT S RR A L + D I + RG I+TR+ + + A++LA AG
Sbjct: 116 DLPEGARVGTGSPRRMAQLNAYARDHGTRIETVPIRGNIDTRIGYVRKGELDAVVLAAAG 175
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV-NNPKAQELVKVINHED---TWDSVN 231
+ R+ + + + L+++ P+PGQGA+ +E NP L + D T +V
Sbjct: 176 LNRIGRTSEVTDFLSVDTVLPAPGQGALAVECRTAGNPADAALAAALAQLDDPFTRAAVT 235
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG----NR 282
ERA LA L+ C + + A + G+V +DG ++S G
Sbjct: 236 AERALLAALEAGCSAPVGALADLLNDGQIDKEMRLRGVVGTTDGSTLVQLSTTGPVPETH 295
Query: 283 CDAINIGRDAA 293
A+ +GR+ A
Sbjct: 296 DQAMALGRELA 306
>gi|290958356|ref|YP_003489538.1| hydroxymethylbilane synthase [Streptomyces scabiei 87.22]
gi|260647882|emb|CBG70987.1| putative hydroxymethylbilane synthase [Streptomyces scabiei 87.22]
Length = 322
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 17/303 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA++ + + + V ++ + ++ ++T GD ++ L +IGG G+
Sbjct: 7 RALRLGTRRSTLAMSQSRQVADA---VRRLTGRPVELVEITTYGD-VSREQLAQIGGTGV 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + + L+ GE+D AVHS KD+PT L ++A R D RDV ++ + + L
Sbjct: 63 FVAALREALLRGEVDFAVHSLKDLPTTYPDELTLAAVPVRADARDVLVARDGLTFEQLPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +GT S RR A L + I + RG ++TR+ + + A++LA AG+ R+
Sbjct: 123 GARVGTGSSRRMAQLNAYARGHGLTIETVPIRGNVDTRIGYVRKGELDAVVLAAAGLSRI 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + L+++ P+PGQGA+ IE + + + ++ DT +V ER+ LA
Sbjct: 183 GRIDEVTDFLSVDTVLPAPGQGALAIECAAADAELIAALAGLDDPDTRAAVTAERSLLAA 242
Query: 240 LDGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290
L+ C + + FA G T + G+V +DG ++S G A+ +GR
Sbjct: 243 LEAGCSAPVGAFADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETYDQAMALGR 302
Query: 291 DAA 293
+ A
Sbjct: 303 ELA 305
>gi|19849545|gb|AAL12221.1| porphobilinogen deaminase [Triticum aestivum]
Length = 198
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A +TR L H + I II + T GD I ++ L +IGGKGL
Sbjct: 43 IRIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIIIIKTTGDMILDKPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L
Sbjct: 103 FTKEIDDALLEGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPA 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
SVIG++SLRR++ +L + V++FRG ++TRL
Sbjct: 163 GSVIGSASLRRQSQILYKYPSLKVVNFRGNVQTRL 197
>gi|317010518|gb|ADU84265.1| porphobilinogen deaminase [Helicobacter pylori SouthAfrica7]
Length = 306
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ T GD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANYIKERLKKECFIESEIQIV---KTTGDKILDAPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITQRADVRDTFLSAQFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL + +
Sbjct: 123 GTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLECGEFDAIVLAEAGLRRLNIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E ++ L K +N E + + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFSTLQK-LNDEKSAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ A G + I+ +G+ + G++ A ++
Sbjct: 242 PVGVHASLMGEKVKIQAILGLPNGEEVITKEKQGDKNKAFDL 283
>gi|167844775|ref|ZP_02470283.1| porphobilinogen deaminase [Burkholderia pseudomallei B7210]
Length = 222
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 127/199 (63%), Gaps = 2/199 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIE 206
+L+++D P+ GQGA+ IE
Sbjct: 194 LLDVDDSLPAAGQGALGIE 212
>gi|269215656|ref|ZP_06159510.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122]
gi|269131143|gb|EEZ62218.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122]
Length = 318
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 135/273 (49%), Gaps = 5/273 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A + ++ P + I + T GDR L EIG KGLFT++
Sbjct: 8 IGTRGSALALWQAHAVKRAIEASR--PDVSCEIRVIKTTGDRNLATPLAEIGDKGLFTKD 65
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALH 124
+E L++GE+D VHS KD+PT+L G I+A L R D RDV + A+ L D+
Sbjct: 66 LEAALVAGEVDICVHSMKDVPTELANGCGITAMLERADARDVIVCGPRIQAECLADVPAG 125
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GT SLRR A + S I RG ++TR+ K + +LA AG+ R+
Sbjct: 126 SRLGTGSLRRVAQIRAGFSGIVPTPIRGNVDTRIAKACGEEYEGAVLAAAGVTRMGLADR 185
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + + P+ GQGA+ IE + + + EL I+ T V ER L L+G C
Sbjct: 186 IAAYIPVSEIVPAVGQGAVGIEARLGDERVCELCARIDDAATRVCVEAERIVLCALEGGC 245
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+ + + + +V + DG V+
Sbjct: 246 QVPMGAYMRFDSGDIAADAVVASVDGSRVARVA 278
>gi|310780153|ref|YP_003968485.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926]
gi|309749476|gb|ADO84137.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926]
Length = 303
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 6/299 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEI 58
M+K IGTR S LA+A + RS L + K P I + T GD TN ++
Sbjct: 2 MKKNKVVIGTRGSLLAVAQSKHVRSMLKE--KYPEIEFEIKEIVTTGDVDLRTNWNNSDT 59
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K LFT+EIEK+L+ G I AVHS KDMP + GL + RED RDV +S + L
Sbjct: 60 SLKSLFTKEIEKELLDGTIHLAVHSMKDMPAESPAGLICGSIPEREDYRDVVVSKSNLKL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L SV+GTSSLRR + R D+ + RG I TRL KL AI+LA AG+KR
Sbjct: 120 SELPEGSVVGTSSLRRTMAVKEMRPDLVIEPIRGNIHTRLRKLKEENFDAIVLAAAGLKR 179
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E I + L + P+P QGA+CI+ ++ +E++ I ++ + V ER F
Sbjct: 180 VGLENEITQYLETHEMMPAPAQGALCIQCKEDDLFIREILSSITEKEVEEVVEIEREFSR 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
DG C + + A G + G+ + + ++ G R + ++ + A IR
Sbjct: 240 IFDGGCHTPMGCSAEIIGDEICLKGMYCHEE--VVYKGEVTGKREEGKSLAQKLAGIIR 296
>gi|325995520|gb|ADZ50925.1| Porphobilinogen deaminase [Helicobacter pylori 2018]
Length = 306
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 5/285 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L + I + TKGD+I + L++IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSMESE---IRIVKTKGDKILDTPLSKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D+RD +S L L + +
Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTVLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + +
Sbjct: 123 GTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++++ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
I A G + ++ +GK + G++ A ++ R+
Sbjct: 242 PIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRE 286
>gi|126662834|ref|ZP_01733833.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38]
gi|126626213|gb|EAZ96902.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38]
Length = 305
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 152/295 (51%), Gaps = 12/295 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L D+ + II + ++GD I ++ L E+G G+
Sbjct: 3 KIIRIGTRDSELALWQAHTVQKKLNDLG----YKTEIIAVKSQGDIILDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +++G++D AVHS KD+PT L G+ +A L R + D+ + +L L
Sbjct: 59 FTKTLDIGMLNGQVDIAVHSMKDVPTALPIGIVQAAVLERANTLDILVHKG--NLDFLTS 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR--LKK 181
I T SLRR+A L + V+D RG + TR+ KLN ++ + + A AG++R +K
Sbjct: 117 SGTIATGSLRRQAQWLNKYPNHKVVDLRGNVNTRMQKLNESEWNGAVFAAAGLERINIKP 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I +++ P+P QGA+ + + E + +N +T ER FL L+
Sbjct: 177 ENYI----DLDWMTPAPAQGAMVVVAMEKDTYCTEALAKLNDRETEICTFIERQFLKTLE 232
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C + I A + F G++ + +GK H + ++ N N G D A+ I
Sbjct: 233 GGCSAPIGALAKFTTENIEFEGVLFSLNGKEKHIIKKSCNFDSYKNFGADCAKEI 287
>gi|167823214|ref|ZP_02454685.1| porphobilinogen deaminase [Burkholderia pseudomallei 9]
Length = 233
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 127/199 (63%), Gaps = 2/199 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193
Query: 188 ILNIEDFPPSPGQGAICIE 206
+L+++D P+ GQGA+ IE
Sbjct: 194 LLDVDDSLPAAGQGALGIE 212
>gi|15611292|ref|NP_222943.1| porphobilinogen deaminase [Helicobacter pylori J99]
gi|11133270|sp|Q9ZMJ7|HEM3_HELPJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4154748|gb|AAD05809.1| PORPHOBILINOGEN DEAMINASE [Helicobacter pylori J99]
Length = 306
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 7/289 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L + I + T GD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECSMESE---IRIVKTTGDKILDAPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL
Sbjct: 116 LPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175
Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++++ PS GQGA+ +E N+ L K +N+E++ + ER F+
Sbjct: 176 VQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNNEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
L+G C+ I A G + ++ +GK + G++ A ++
Sbjct: 235 LNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDL 283
>gi|254382514|ref|ZP_04997873.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1]
gi|194341418|gb|EDX22384.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1]
Length = 322
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 156/308 (50%), Gaps = 21/308 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR S LA++ + + V I + ++ ++T GD ++ L +IGG G+
Sbjct: 7 QPLRLGTRRSKLAMSQSGHVADA---VRAITGRPVELVEITTYGD-VSREHLAQIGGTGV 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L+ GEID AVHS KD+PT L I+A PRED RD ++ + + L
Sbjct: 63 FVTALRDALLRGEIDFAVHSLKDLPTTQPDDLVIAAMPPREDPRDALVARDGLTFEQLPD 122
Query: 124 HSVIGTSSLRRKALL------LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ +GT S RR A L L R I + RG ++TR+ + N + A++LA AG+
Sbjct: 123 GARVGTGSPRRMAQLNHAARALGKR--IETVAIRGNVDTRIGFVRNGELDAVVLAAAGLN 180
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + L+++ P+PGQGA+ +E ++ + + ++ T +V ER+ L
Sbjct: 181 RIGRSDEATDFLSVDSVLPAPGQGALAVECLASDAELIAALAELDDPHTRAAVTAERSLL 240
Query: 238 AELDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINI 288
A L+ C + + A G + + G+V DG ++S G + DA+ +
Sbjct: 241 AALEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGTTLVQLSTTGPVPQSYDDAMAL 300
Query: 289 GRDAAQYI 296
GR+ A +
Sbjct: 301 GRELADEM 308
>gi|209155902|gb|ACI34183.1| Porphobilinogen deaminase [Salmo salar]
Length = 358
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K LFT
Sbjct: 20 IRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 77
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE D + H S L L
Sbjct: 78 KELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLDTLP 137
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181
SVIGTSSLRR A L + + D RG + TRL KL+ + + AI+LA AG+KR+
Sbjct: 138 DGSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKRMGW 197
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + ++L ED + GQGA+ +E + E+V ++H +T ERAFL L+
Sbjct: 198 EARVSQVLGPEDCMYAVGQGALAVEVRARDCDILEMVSTLHHSETVLRCIAERAFLRRLE 257
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K S L G V + DG
Sbjct: 258 GGCSVPVAVNTEVKDSVLSLTGAVYSLDG 286
>gi|313835649|gb|EFS73363.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA2]
gi|314928321|gb|EFS92152.1| porphobilinogen deaminase [Propionibacterium acnes HL044PA1]
gi|314970250|gb|EFT14348.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA3]
Length = 337
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 131/267 (49%), Gaps = 26/267 (9%)
Query: 6 FRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
R+GTR S LA A RS +DV + ++T+GD T +L +GG
Sbjct: 7 IRLGTRASTLATTQSEMVAGMLRSEGLDVD--------LTTITTRGDTSTT-SLAAMGGI 57
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L DL
Sbjct: 58 GVFASAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLNDL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAILL 171
+ +GT S RR A LL R D+++ID RG ++TRL ++ A++L
Sbjct: 118 PQGASVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVVL 177
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV---INHEDTWD 228
A +G+ RL V+ E LN P+P QGA+ +E + + +L K I+ T
Sbjct: 178 AASGLARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTRL 237
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCK 255
+ ERA L+ L+ C + I A K
Sbjct: 238 AATAERAVLSHLEAGCAAPIGALAQLK 264
>gi|297627045|ref|YP_003688808.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922810|emb|CBL57388.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 310
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 137/261 (52%), Gaps = 5/261 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+++ +IGTR S LA + + T + + V +P +++ T GD ++ L+
Sbjct: 11 DRRVLKIGTRGSRLARSQSAMTAALIEQVTGLPTELVIV---HTDGDDLSI-PLSAPPRP 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G F + L+ GE+D AVHS KD+P + GL + A R D +S A L +L
Sbjct: 67 GAFVARLRDVLLDGEVDIAVHSFKDLPFAPMPGLSVVAVPQRAAALDALVSRDALGLDEL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S +GTSS RR + LLR+R D+ ++ RG ++TR+ K+ + A +LA AG++RL
Sbjct: 127 PAGSKVGTSSPRRASALLRYRDDLEIVPIRGNVDTRIRKVREGRVDAAVLAAAGLERLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E+++ + P+P QGA+ +E ++P A + + IN DT V ER L +
Sbjct: 187 HDEITELIDPKVIVPAPAQGALAVEMRTDDPLAATVAQ-INDHDTRIQVAAERQVLTGVQ 245
Query: 242 GSCKSAIAGFAYCKGSTLYFY 262
+C +AI + +G +L
Sbjct: 246 ATCTTAIGAHSVLQGYSLTLM 266
>gi|328908097|gb|EGG27856.1| hydroxymethylbilane synthase [Propionibacterium sp. P08]
Length = 334
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 131/267 (49%), Gaps = 26/267 (9%)
Query: 6 FRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
R+GTR S LA A RS +DV + ++T+GD T +L +GG
Sbjct: 4 IRLGTRASTLATTQSEMVAGMLRSEGLDVD--------LTTITTRGDTSTT-SLAAMGGI 54
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L DL
Sbjct: 55 GVFASAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLNDL 114
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAILL 171
+ +GT S RR A LL R D+++ID RG ++TRL ++ A++L
Sbjct: 115 PQGASVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVVL 174
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV---INHEDTWD 228
A +G+ RL V+ E LN P+P QGA+ +E + + +L K I+ T
Sbjct: 175 AASGLARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTRL 234
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCK 255
+ ERA L+ L+ C + I A K
Sbjct: 235 AATAERAVLSHLEAGCAAPIGALAQLK 261
>gi|301102795|ref|XP_002900484.1| porphobilinogen deaminase [Phytophthora infestans T30-4]
gi|262101747|gb|EEY59799.1| porphobilinogen deaminase [Phytophthora infestans T30-4]
Length = 361
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 160/310 (51%), Gaps = 14/310 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--- 59
K+ + +R S LA+A + L + + P V+ T GD++ +R L+++G
Sbjct: 13 KRTIFVSSRKSQLAMAQTNTVIAMLEE--RFPDLQFVVGQEDTVGDQVLDRHLSDLGTTT 70
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---- 115
GLFT+ +E+ L++ AVHS KDMPT L GL ++A RE D + H
Sbjct: 71 ASGLFTKSLEEALLAKAASFAVHSLKDMPTTLPDGLVLAAITKRESPEDAAVIHPKHKEK 130
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLA 172
++L++L SVIGTSSLRR+ALL + RG I+TRL KL+ + + AI++A
Sbjct: 131 GIKTLQELPEGSVIGTSSLRREALLRSQFPTFEIKTVRGNIQTRLAKLDEHDDYDAIIVA 190
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G +R + I EIL ++ F GQG+I +E ++ + E++K I E +
Sbjct: 191 ACGFRRGELGDRIDEILPMDTFGYGVGQGSIGVECRADDEETIEMLKTITDEKSAQLCKA 250
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
ER+ L L+G C+ A+ A TL VL+ DGK + +G R +G+
Sbjct: 251 ERSLLYHLEGGCQIAMGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQL 310
Query: 293 AQYIRFISNK 302
A+ RF +N+
Sbjct: 311 AE--RFWNNE 318
>gi|726352|gb|AAC44323.1| porphobilinogen deaminase [Yersinia pestis]
Length = 184
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 105/179 (58%), Gaps = 2/179 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRL 177
>gi|253787595|dbj|BAH84857.1| putative porphobilinogen deaminase [Cucumis sativus]
Length = 188
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EI+ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A S +L S+
Sbjct: 1 EIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSI 60
Query: 127 IGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT+SLRRK+ LL + V++ FRG ++TRL KLN A LLA AG++RL + +
Sbjct: 61 IGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENV 120
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
IL+I++ P+ QGAI I ++ + +NHE+T +V CERAFL LDGSC+
Sbjct: 121 TSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSCR 180
Query: 246 SAIAGF 251
+ IAG
Sbjct: 181 TPIAGI 186
>gi|109947886|ref|YP_665114.1| porphobilinogen deaminase [Helicobacter acinonychis str. Sheeba]
gi|123066146|sp|Q17W61|HEM3_HELAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|109715107|emb|CAK00115.1| hemC [Helicobacter acinonychis str. Sheeba]
Length = 306
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 147/281 (52%), Gaps = 5/281 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ T GD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANYIKERLKKECFIESEIQIV---KTTGDKILDAPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSTKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + + AI+LA AG+ RL + +
Sbjct: 123 GTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLESGEFDAIILAEAGLCRLNIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E ++ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFTALQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
+ A G + I+ +G+ + G++ A +
Sbjct: 242 PVGVHASLMGEKVKIQAILGLPNGEEVIAKEKQGDKNKAFD 282
>gi|460692|dbj|BAA05861.1| porphobilinogen deaminase [Clostridium josui]
Length = 295
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 155/294 (52%), Gaps = 9/294 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKGL
Sbjct: 6 KKIRIGSRDSKLAIIQSELIMSAIRKYD--PDIELELITMKTTGDKILDKTLDKIEGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L + E+D VHS KDMP + L + A RED RD FI Q+ ++
Sbjct: 64 FVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFI--LPQNGEN--- 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 119 GEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G
Sbjct: 179 RIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + IA +A +GS + G+ + +GNR + + +G + + ++
Sbjct: 237 CSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMK 290
>gi|288574447|ref|ZP_06392804.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570188|gb|EFC91745.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 454
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 147/292 (50%), Gaps = 14/292 (4%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
+R S LA A E +L +P + I +ST GD + L+ GG G F + +E
Sbjct: 160 SRKSALARAQTMEAARALAK-KGLP---VEIKTMSTCGDEKQDCHLSAFGGNGAFVKCLE 215
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+ ++ G+ D A+HS KD+P+ L GL++ A LPR DV +S+ L+ L +V+GT
Sbjct: 216 EAIMEGKGDGAIHSLKDVPSVLPDGLELVAVLPRASTSDVIVSNHKGGLEGLPAGAVVGT 275
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189
SSLRRKA L R D+ RG + TRL KL + A AI+LA AG+ RL + E
Sbjct: 276 SSLRRKAQLAITRPDLDYTLIRGNVNTRLAKLQSGDADAIVLAKAGLDRL---GISPEGA 332
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F P+P QG I +E + A+E + INH TW ER L L C A
Sbjct: 333 TTLPFLPAPCQGIIAVEARSGSRLAEEF-RAINHRPTWLMALAERELLESLQVGCHVPFA 391
Query: 250 GFAYCKGSTLYFYGIVLASDGK-IFHEVS---RNGNRCDAINIGRDAAQYIR 297
+ G L L+ DG+ I E S R+ + DA ++GRD A I+
Sbjct: 392 ALSEWVGGELRLRAQTLSYDGRHIDFEGSLAVRSDD--DARDLGRDVALSIK 441
>gi|167761211|ref|ZP_02433338.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704]
gi|167660877|gb|EDS05007.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704]
Length = 803
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 146/286 (51%), Gaps = 6/286 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LA+ + + H P + ++ + T GD+ + TL +IGGKGLF +E
Sbjct: 7 VGSRESRLAIIQTEKVMEHIRRSH--PKIELEMMTMETTGDKRLDVTLDQIGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++K L+ G ID AVHS KDMP K + I Y PRED+RDV + + +++ +I
Sbjct: 65 LDKALLDGRIDLAVHSLKDMPMDESKVIPIVRYSPREDVRDVLV--LPKGVEEWDGRGII 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
G SS RR+ R + RG + TRL KL+ + A++LA AG+KRL E I
Sbjct: 123 GCSSFRRRIQAKRLFKEAEFRSVRGNVITRLEKLDRGEYDALILAAAGLKRLGLEYRISR 182
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++ P+ GQG + ++ ++ L ED + + ERAF+ LDG C S
Sbjct: 183 YFSTDEILPAAGQGTMAVQGRIDM-NYDFLEGYGKKEDAYIA-KGERAFVRYLDGGCSSP 240
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+A + L G+ + + S++G +A IGR+ A
Sbjct: 241 VAAYGEVIDGQLLMKGLYYMEETGNYAIGSKSGPVEEAEKIGRELA 286
>gi|111019045|ref|YP_702017.1| porphobilinogen deaminase [Rhodococcus jostii RHA1]
gi|110818575|gb|ABG93859.1| hydroxymethylbilane synthase [Rhodococcus jostii RHA1]
Length = 321
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 16/288 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LA A R +L+ H+ ++ + TKGD+ + ++ +IG G+
Sbjct: 7 RTLRIGTRGSELATTQAGTVRDALISAG----HDAELVIIKTKGDQ-SMESVEKIG-VGV 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ L +L
Sbjct: 61 FTAELREALADGRVDVAVHSYKDLPTAPDERFTIAAIPPREDPRDALVARDGLVLGELPA 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S +GTS+ RR + L + + RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 121 GSKVGTSAPRRTSQLRALGLGLDIRPLRGNLQRRLGKVESGELDAVVLARAGLARIGRLD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+I E + P+P QGA+ +E N ++ ++ ++ +V ERA LAEL+
Sbjct: 181 LITESIEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALLAELEAG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
C + + A S L DG+IF E+S G C A G D
Sbjct: 241 CTAPVGAIAEVVES--------LDDDGRIFDELSVRG--CAAAIDGSD 278
>gi|25453441|sp|Q59293|HEM3_CLOJO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 291
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 155/294 (52%), Gaps = 9/294 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKGL
Sbjct: 2 KKIRIGSRDSKLAIIQSELIMSAIRKYD--PDIELELITMKTTGDKILDKTLDKIEGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L + E+D VHS KDMP + L + A RED RD FI Q+ ++
Sbjct: 60 FVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFI--LPQNGEN--- 114
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 115 GEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G
Sbjct: 175 RIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNGG 232
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + IA +A +GS + G+ + +GNR + + +G + + ++
Sbjct: 233 CSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMK 286
>gi|256371068|ref|YP_003108892.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331]
gi|256007652|gb|ACU53219.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331]
Length = 291
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 149/307 (48%), Gaps = 26/307 (8%)
Query: 5 PFRIGTRCSPLALAHAFET-----RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
P RI TR S LA A R L++VH T GDR +L EIG
Sbjct: 3 PVRIATRRSALARWQASLVGERLGRYELVEVH-------------TAGDRDQASSLAEIG 49
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G+G+F +E++ ++ GE D AVHSAKD+PT L ++A L R D RD + L+
Sbjct: 50 GQGVFVKEVQAAVVRGEADIAVHSAKDLPTA-AGPLLLAAVLERADARDAIVGA---RLE 105
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+LA+ + +GTS+ RR A L R D+ V+ RG I TRL ++ + AI++A A ++RL
Sbjct: 106 ELAIGARVGTSAPRRAAQLRLLRPDLEVVSIRGNIATRLGRV--GELDAIVMAVAALERL 163
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E+ L E P GQGAI +E + E ++ ++ + + + ERA LA
Sbjct: 164 GLEEPPWWPLPEEVLCPQAGQGAIAVECAPDADGLIERLRSLDDDRSRREIEAERAVLAA 223
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + A+ GS+L + + DG EV R G D +G A+ +R +
Sbjct: 224 FGTGCALPLGARAHADGSSLRLRAVAVDPDGTRQLEVEREG--VDPATLGATVAEVLRRL 281
Query: 300 SNKNVFN 306
+
Sbjct: 282 GADALVG 288
>gi|269791662|ref|YP_003316566.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099297|gb|ACZ18284.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 307
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 137/265 (51%), Gaps = 9/265 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F + TR SPLA+A A + + + H++ ++ +ST GDR R L GG G F
Sbjct: 4 FDLLTRSSPLAMAQARMWKDRIESLG----HSVRLLDVSTHGDRDRRRHLACFGGFGAFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ +E +L+SG+ AVHS KD+P+ GL I+ L R DV ++ SL++L +
Sbjct: 60 KALEDRLLSGQGHGAVHSLKDVPSVQPDGLVIAGVLERGPRGDVLVTREGLSLEELPSGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR A + R D++V RG + +RL KL H I+LA AG++RL +
Sbjct: 120 VIGTSSIRRAAQVRMLRGDLNVECCRGNVHSRLRKLEQGLFHGIVLARAGLERLGIRAPM 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ F SPGQGA+ +E + L + H TW V ER+FL C
Sbjct: 180 AEL----PFITSPGQGAVALEAR-EGSELHLLGARLTHRSTWLEVLAERSFLKAFGMGCS 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
+ +A A TL VL+ +G
Sbjct: 235 APVAASAVMDRDTLTLKVQVLSPNG 259
>gi|158518657|sp|Q8TXC8|HEM3_METKA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
Length = 298
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 157/297 (52%), Gaps = 10/297 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGL 63
R+ TR S LA+ +TR + + + P ++ I+ ++GD + +R L ++G KG+
Sbjct: 5 IRVATRSSRLAI---IQTREVIELLERESPRDVEVEIVKTKSRGDVVRDRPLHKLGEKGV 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+L
Sbjct: 62 FVKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSRHG-GLKELPR 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL
Sbjct: 121 GATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLGMTS 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL
Sbjct: 181 EVSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVRELGVG 240
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + + G + + DG H + G+ D + R+A R +
Sbjct: 241 CSEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVV---REAVSQAREV 294
>gi|217031453|ref|ZP_03436958.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128]
gi|298736817|ref|YP_003729347.1| hydroxymethylbilane synthase [Helicobacter pylori B8]
gi|216946653|gb|EEC25249.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128]
gi|298356011|emb|CBI66883.1| hydroxymethylbilane synthase [Helicobacter pylori B8]
Length = 306
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 146/282 (51%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I I + T GD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESE---IQIVKTTGDKILDAPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ G ID AVHS KD+P KGL ++ R D RD F+S L L + +
Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADARDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + +
Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+ A G + ++ +GK + G++ A ++
Sbjct: 242 PVGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDL 283
>gi|309810452|ref|ZP_07704278.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185]
gi|308435584|gb|EFP59390.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185]
Length = 327
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 130/251 (51%), Gaps = 5/251 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P R+GTR S LA+ + L H H + I+ ++T+GD + +L ++GG
Sbjct: 7 DAAPIRLGTRRSHLAMTQSTWVAEQLR-AHG---HAVEIVEITTEGD-VNRASLAQMGGT 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F I + L+ E+D AVHS KD+P GL I+ RED RD ++ +L +L
Sbjct: 62 GVFAAAIRRALLEDEVDMAVHSLKDLPVAPEPGLVIAGIPVREDPRDALVARDGLTLGEL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT S RR A L + D RG I+TR+ + + + ++LA AG+ R+++
Sbjct: 122 PAGAVVGTGSPRRAAQLQALGLGFEIRDIRGNIDTRMGYVTSGELDGVILARAGLARVER 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E ++ P+PGQGA+ +E + + + ++ DT +V ERA L L+
Sbjct: 182 TGAISETIDPLQMLPAPGQGALGLECREGDARVIAALAELDDADTRAAVTAERAVLGALE 241
Query: 242 GSCKSAIAGFA 252
C + + A
Sbjct: 242 AGCAAPVGALA 252
>gi|20094183|ref|NP_614030.1| porphobilinogen deaminase [Methanopyrus kandleri AV19]
gi|19887202|gb|AAM01960.1| Porphobilinogen deaminase [Methanopyrus kandleri AV19]
Length = 305
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 157/297 (52%), Gaps = 10/297 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGL 63
R+ TR S LA+ +TR + + + P ++ I+ ++GD + +R L ++G KG+
Sbjct: 12 IRVATRSSRLAI---IQTREVIELLERESPRDVEVEIVKTKSRGDVVRDRPLHKLGEKGV 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+L
Sbjct: 69 FVKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSRHG-GLKELPR 127
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL
Sbjct: 128 GATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLGMTS 187
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL
Sbjct: 188 EVSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVRELGVG 247
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + + G + + DG H + G+ D + R+A R +
Sbjct: 248 CSEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVV---REAVSQAREV 301
>gi|218513448|ref|ZP_03510288.1| porphobilinogen deaminase [Rhizobium etli 8C-3]
Length = 137
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 93/134 (69%)
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
TRL KL + A LLA AG+KRL K +V+ +IL+ + FPP+P QGAICIE+ + + +
Sbjct: 1 TRLRKLEEGQVDATLLALAGLKRLGKVEVLTDILDPDTFPPAPAQGAICIESRIGDSRID 60
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
+L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G + F G+++ DG+ H
Sbjct: 61 DLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHA 120
Query: 276 VSRNGNRCDAINIG 289
V+ +G+R DA +G
Sbjct: 121 VTTDGHRRDAAALG 134
>gi|32474491|ref|NP_867485.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1]
gi|39931387|sp|Q7UPN0|HEM3_RHOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|32445029|emb|CAD75031.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1]
Length = 337
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 148/281 (52%), Gaps = 20/281 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ A E + L+ H I+PL +KGD R + GLFT
Sbjct: 12 LRIATRESPLAMWQA-EHVAKLLKKHGF---QTEIVPLVSKGD-TDMRPIDGTRQVGLFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---------SHT-A 115
+ I++ L+ E D AVHS KD+PT+ ++A PRE + D + S T A
Sbjct: 67 KRIQQALVDDEADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLESQTGA 126
Query: 116 QSLKD-LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+S D L + +GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+A
Sbjct: 127 ESPLDYLPQGARVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHA 186
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
GI RL+ + + +++ P+PGQGA+ IE ++ A + + +N + ER
Sbjct: 187 GILRLEMTDLPHRLFPLDEMIPAPGQGALGIEVRSDDAGAMDAIANLNDAAARLAATAER 246
Query: 235 AFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGK 271
L+EL G C + IA A + G+ L IV+++DG+
Sbjct: 247 KVLSELHGGCLAPIACHAKLETSNHGTELCLRAIVMSADGE 287
>gi|221126431|ref|XP_002156062.1| PREDICTED: similar to hydroxymethylbilane synthase, partial [Hydra
magnipapillata]
Length = 418
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 145/276 (52%), Gaps = 6/276 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
EK +G+R S LA+ ++L K +I + T GD+I + L +IG K
Sbjct: 27 EKTSVVVGSRKSQLAVIQTKSIVAAL--CQKEKDVECIIETMDTLGDKILHIALPKIGEK 84
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
LFT+++E L +D VHS KD+PT L +G+ IS R+D RD I H + L
Sbjct: 85 SLFTKDLELALSEKRVDFLVHSLKDLPTTLPQGMAISTIYKRDDPRDCIIFHPKHNGKKL 144
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIK 177
DL +S+IGTSSLRR A L R + ++ RG + TRL KL + AI+LA AG+
Sbjct: 145 ADLPENSIIGTSSLRRVAQLKRKYNKLTFQSVRGNLNTRLQKLEEESLYDAIVLAKAGVD 204
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + I +IL+ ++ + GQGAI +E ++ ++ + +T + ER F+
Sbjct: 205 RMGWTEKIGQILSEDECLYAIGQGAITVEVRNDDKYTISILAQLTDMETLLACVAERCFM 264
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L+G C + IA + G+ GIVL +DG F
Sbjct: 265 RTLNGGCSTPIACHSQFSGNNYSLRGIVLNADGSRF 300
>gi|56856|emb|CAA29984.1| unnamed protein product [Rattus norvegicus]
Length = 344
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 139/269 (51%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + ++L+ L
Sbjct: 62 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFEGKFIGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRLKK 181
S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ER FL L+
Sbjct: 182 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERDFLRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K LY G V + DG
Sbjct: 242 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 270
>gi|253579011|ref|ZP_04856282.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39B_FAA]
gi|251849954|gb|EES77913.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39BFAA]
Length = 317
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 142/263 (53%), Gaps = 12/263 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIGGKGL 63
IG+R S LA+ + +S + ++ + I+ + T GD I +RTL ++GGKGL
Sbjct: 22 IGSRESKLAVLQSEMVKSYIEQKNREENAGSEITVNILTMKTTGDIILDRTLDKVGGKGL 81
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+++ L+ G+ + +VHS KDMP ++ K L + A+ RED RDV + + + +L
Sbjct: 82 FVKELDRALLDGKSNLSVHSLKDMPMEVPKELPLLAFSKREDPRDVLV--LPEGVAELDP 139
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+G SSLRR L + ++ V RG ++TRL KL+ + ++LA AG+KRL E
Sbjct: 140 DKPLGCSSLRRTLQLKKLYPEMEVKSIRGNLQTRLRKLDEGEYSGLILAAAGLKRLGLEN 199
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH--EDTWDSVNCERAFLAELD 241
I ++ PS GQG + ++ K ++ + + D W + ERA++ LD
Sbjct: 200 RISRYFTPDEMIPSAGQGILAVQGR----KGEDYGYLDGYCDRDAWLAGTAERAYVKYLD 255
Query: 242 GSCKSAIAGFAYCKGSTLYFYGI 264
G C S +A FA G ++ G+
Sbjct: 256 GGCSSPVAAFAEVDGDEIFIRGL 278
>gi|38233015|ref|NP_938782.1| porphobilinogen deaminase [Corynebacterium diphtheriae NCTC 13129]
gi|55976429|sp|Q6NJK0|HEM3_CORDI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|38199274|emb|CAE48905.1| Porphobilinogen deaminase [Corynebacterium diphtheriae]
Length = 294
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 136/267 (50%), Gaps = 11/267 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA + R L P+ ++ ++T GD N E G G+FT
Sbjct: 3 LKIGTRGSLLATTQSGHVRDDLR------PYEAELVIVTTHGD--VNMAPVERIGVGVFT 54
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + ++L +G D AVHS KD+PT+L + +P R D RD I+ SL DL
Sbjct: 55 QALREELHTGGCDIAVHSFKDLPTELDPRFHL--VVPKRADFRDCLIARDGLSLADLPAG 112
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 113 ALIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVTSGELDAVVLAYAGLTRVGRGDE 172
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + +DF P+P QGA+ +E ++ A+E + I E ER L L+ C
Sbjct: 173 ATQVFDPQDFLPAPAQGALAVECRADDAYAREAIDSICDEQAQVCAVTERVVLNRLEAGC 232
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK 271
+ +A A TL V+A DG
Sbjct: 233 TAPVAAHATLNDGTLTLTAAVIALDGS 259
>gi|169762720|ref|XP_001727260.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83770288|dbj|BAE60421.1| unnamed protein product [Aspergillus oryzae]
Length = 330
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 145/276 (52%), Gaps = 10/276 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R+ L + P + I L T GDR L G K
Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRNCLQKIA--PDRSFEIEALRTLGDRDQLTALYNFGAKS 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T E+E+KL +GE+D VH KDMPT L +++A PR+D RD I SLK
Sbjct: 66 LWTTELEEKLNAGELDVIVHCLKDMPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSLK 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
L +V+GTSS+RR A L R + + RG +ETRL K++N+ + ++++ AG++
Sbjct: 126 SLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDNSDSEYTCMVMSAAGLE 185
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ E I + L +D + GQGA+ +E + K QEL+ + + + + ER+
Sbjct: 186 RVGLEHRISQYLGSKDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQQSTLACLAERS 245
Query: 236 FLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDG 270
+ L+G C + I + L + IV++ DG
Sbjct: 246 LMRTLEGGCSAPIGVETEWISAGALSIHAIVVSLDG 281
>gi|119490987|ref|XP_001263154.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL
181]
gi|119411314|gb|EAW21257.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL
181]
Length = 331
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 144/276 (52%), Gaps = 10/276 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+A A R SL + +P + I L T GDR L G K
Sbjct: 9 QPPLRIGTRRSNLAMAQAEGIRDSLQKI--VPDRSYEIEALRTLGDRDQLTALYSFGAKS 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T E+E+KL SGE+D VH KDMPTKL +++A PR+D RD I SLK
Sbjct: 67 LWTTELEEKLTSGELDVIVHCLKDMPTKLPDTCELAAIPPRDDPRDALIVKAGLPYTSLK 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
L +V+GTSS+RR A L R + + RG +ETRL K+++ + ++++ AG++
Sbjct: 127 SLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDSEYTCMVMSAAGLE 186
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ + I + L D + GQGA+ +E + K QEL+ + + + + ER+
Sbjct: 187 RVGLKHRISQYLGSRDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQKSTLACLAERS 246
Query: 236 FLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDG 270
+ L+G C I + L IV++ DG
Sbjct: 247 LMRTLEGGCSVPIGVETEWMPSGDLRMNAIVVSLDG 282
>gi|134103372|ref|YP_001109033.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
gi|291004409|ref|ZP_06562382.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
gi|133915995|emb|CAM06108.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
Length = 315
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 20/307 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LA+A S + + + + ++ +ST GDR + + EIG G+
Sbjct: 3 KTLRIGTRGSALAMAQT----SWVAEALEKAGYRTELVTVSTPGDR-SMAPIAEIG-VGV 56
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L
Sbjct: 57 FTSALRDALADGEVDVAVHSYKDLPTAPDPRLSLAAVPVREDPRDALVARDGLTLGELPP 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GT S RR L + V D RG ++TR+ K+ + + A++LA AG+ R+ +
Sbjct: 117 GSVVGTGSPRRAGQLKALGLGLEVRDIRGNVDTRMRKVTDGELDAVVLARAGLARVGRLA 176
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDG 242
I E L+ P+P QGA+ +E V++ + L++ V++ + + +V ERA LA L+
Sbjct: 177 GITETLDPLQMLPAPAQGALAVECRVDDVDTEHLLQSVLDDQASRVAVAAERAMLAALEA 236
Query: 243 SCKSAIAGFAYC---------KGSTLYFYGIVLASD--GKI-FHEVSRNGNRCDAINIGR 290
C + + A L+ G+V D G++ S G A +GR
Sbjct: 237 GCSAPVGALAEVVEDLDADGRVAQRLFVRGVVAVDDASGRVDLLRASVTGETTAAEQLGR 296
Query: 291 D-AAQYI 296
+ AAQ +
Sbjct: 297 ELAAQLL 303
>gi|296168169|ref|ZP_06850190.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896847|gb|EFG76476.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 317
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 17/276 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLM-DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R +L+ + H P +VII +T GDR + E G G F
Sbjct: 5 IRIGTRGSLLATTQAGVVRDALIANGH---PAELVII--TTAGDR--SSAPIETLGVGAF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + + + G +D AVHS KD+PT I+A PR D RDV ++ L +L
Sbjct: 58 TTALREAINDGRVDAAVHSHKDLPTADDPRFTIAAIPPRNDPRDVVVARDGLVLGELPPG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL +
Sbjct: 118 SLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDD 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L P+P QGA+ +E + A L + ++ DT SV ERA LAEL+ C
Sbjct: 178 VTETLEPVQMLPAPAQGALAVECRAGDGLAAVLAE-LDDADTRASVTAERALLAELEAGC 236
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S L +G++F E+S G
Sbjct: 237 SAPVGAIAEVVES--------LDEEGRVFEELSLRG 264
>gi|226305131|ref|YP_002765089.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4]
gi|226184246|dbj|BAH32350.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4]
Length = 324
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 148/290 (51%), Gaps = 22/290 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ P +VII TKGD+ T+ + +IG G+F
Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAAGH--PAELVII--KTKGDQSTD-PVQKIG-VGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 65 TAELREALLDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-NHED--TWDSVNCERAFLAELD 241
I E + P+P QGA+ +E N EL ++ H+D T +V ERA LAEL+
Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSAN---VELAAILAEHDDAGTRAAVTAERALLAELE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
C + + A S L DG+IF E+S G C A G D
Sbjct: 242 AGCTAPVGAIAEIVES--------LDDDGRIFDELSVRG--CAAAIDGSD 281
>gi|307187698|gb|EFN72670.1| Porphobilinogen deaminase [Camponotus floridanus]
Length = 357
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 151/273 (55%), Gaps = 7/273 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL SL ++H P I+ ++TKGD+I +++L +IG K LFT
Sbjct: 10 IRVGSRKSELALIQTKHVIQSLKELH--PKKEFEIVTMNTKGDKILDKSLPKIGEKSLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH- 124
EE+E L + ID VHS KDMPT L G+ + A L RED RD + K L+
Sbjct: 68 EELEIALENDRIDFVVHSLKDMPTTLPAGMALGAILKREDPRDAVVMSKKFKSKKLSSLP 127
Query: 125 --SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180
S+IGTSSLRR A L R + + + RG + TRL KL+ N AI+LA AG+KR+
Sbjct: 128 KGSIIGTSSLRRSAQLSRNMPHLKIQNIRGNLNTRLKKLDDENGSYAAIILAAAGLKRMG 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++L E+ + GQGA+ +E ++ + + L++ + +T CER+FL L
Sbjct: 188 WEDRISQLLEPEEALYAIGQGALGVECRESDWEIRSLLEPLFDVETTLRCVCERSFLKTL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
G C + +A + K + L G V + DG+
Sbjct: 248 GGGCSAPVAVSSCLKKNELTITGAVWSLDGQTL 280
>gi|72004296|ref|XP_781025.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115932051|ref|XP_001188143.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 324
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 6/248 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LA+ L VH P I+ + T GD I ++ L IG LFT
Sbjct: 8 VRVGSRKSELAMIQTNHVVEMLQKVH--PETEFKIVTMETIGDHIQDKPLASIGESNLFT 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+EK L E+D VHS KDMP++L + I A RED D + H T S++ +
Sbjct: 66 KELEKALALDEVDMLVHSLKDMPSRLPSNMAIGAICEREDPHDALVLHKKLTGISIETMK 125
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181
SV+GTSS+RR A L R + D RG + TRL KL+ + + ++LA AG+ R+
Sbjct: 126 EGSVLGTSSVRRVAQLKRKFPHLVFKDVRGNLNTRLRKLDEGQVYDGLVLAVAGMMRMGW 185
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I +IL + S QGA+ IE N + EL++ +NH T ER L L+
Sbjct: 186 EHRISQILKPDICKYSVSQGALGIEIKTKNRRMHELLRQLNHVPTLIRCIAERGLLKTLE 245
Query: 242 GSCKSAIA 249
G C + +A
Sbjct: 246 GGCSAPVA 253
>gi|317180043|dbj|BAJ57829.1| porphobilinogen deaminase [Helicobacter pylori F32]
Length = 306
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 152/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ERAF+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLERAFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A+++
Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDL 283
>gi|115387533|ref|XP_001211272.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
gi|114195356|gb|EAU37056.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
Length = 342
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 154/291 (52%), Gaps = 14/291 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL +++L P ++ I T GD+ T L + K
Sbjct: 17 KTTFTIGTRKSKLALLQTDLVQAALQKAW--PQYSFRIHSRETAGDQNTTIALRDFTTKN 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
L+T+E+E LI+G++D VHS KD+PT L + L RED RDV + + +SL
Sbjct: 75 LWTQELEDLLIAGDVDLIVHSLKDVPTLLPPSCTLGPMLKREDTRDVLVVKKGLSYKSLD 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
DL SV+GTSS+RR A L R + +ID RG I TRL KL+ I+LA AG+
Sbjct: 135 DLPAGSVVGTSSIRRTAQLARRYPHLKIIDVRGNIGTRLAKLDAEDGPFTCIILAAAGLL 194
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL + I + L+ ++ + GQGA+ IE ++P E++K I ++T + ER+
Sbjct: 195 RLGLQDRITQYLDSKNGGMLYAVGQGALGIEIRKDDPLMHEMLKNIGDDETTFASLAERS 254
Query: 236 FLAELDGSCKSAI---AGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGN 281
L L+G C + + + + GS+ L IV++ DGK EV +G+
Sbjct: 255 LLRTLEGGCSAPLGVESEWIPSSGSSRKLRMRSIVVSVDGKESAEVEVDGD 305
>gi|313215076|emb|CBY42810.1| unnamed protein product [Oikopleura dioica]
Length = 368
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 150/281 (53%), Gaps = 20/281 (7%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
G+R S LA+ +S L + P I I + TKGD++ + L++IG K LFT+E+
Sbjct: 6 GSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLFTKEL 63
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------SHTAQSLKDLA 122
E L G++ VHS KDMPT L +G+ +S L RE D + +SL L
Sbjct: 64 EVALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSLDQLE 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------NKAHAILLAYAGI 176
++IG+SSLRRKA L R + + RG + TRL KL+N + A++LA AG+
Sbjct: 124 KTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILARAGL 183
Query: 177 KRLKKEKV-----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
+R+ ++ + E L+ + + GQGA+ IET + K EL+ ++HE+T V
Sbjct: 184 ERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETTLRVV 243
Query: 232 CERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGK 271
ER+F+ L+G C + +A + K + L G V + DGK
Sbjct: 244 AERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGK 284
>gi|225706856|gb|ACO09274.1| Porphobilinogen deaminase [Osmerus mordax]
Length = 357
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K LFT
Sbjct: 19 IRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L L
Sbjct: 77 KELENALERNEVDLVVHSLKDLPTTLPTGFTIGAVLQRENPHDAVVLHPKNAGLTLDALP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181
SVIGTSSLRR A L + + D RG + TRL KL+ + + AI+LA AG+KR+
Sbjct: 137 SESVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKRMGW 196
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + +IL +D + GQGA+ IE + E+V ++H +T ERAFL L+
Sbjct: 197 EGRVSQILGPDDCMYAVGQGALAIEVRARDRDILEMVSTLHHPETVLRCIAERAFLKHLE 256
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
G C +A K L G V + DG
Sbjct: 257 GGCSVPVAVHTELKDLMLSMTGAVFSLDG 285
>gi|310658305|ref|YP_003936026.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Clostridium sticklandii DSM 519]
gi|308825083|emb|CBH21121.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Clostridium sticklandii]
Length = 304
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 156/297 (52%), Gaps = 12/297 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+G+R S LAL +T+ + ++ K+ P+ + I + TKGD+I + L ++ KG+F +
Sbjct: 5 VGSRGSQLALT---QTKLIVNELSKLNPNVDFEIKVIKTKGDKIQDIPLDKMNDKGIFVK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS- 125
EIE++LIS EID AVHS KDMPTK+ + L RED RD I L+DL++
Sbjct: 62 EIEEQLISYEIDMAVHSMKDMPTKMDERLVFPVIPKREDSRDALILKNNLKLEDLSMLET 121
Query: 126 -VIGTSSLRRKALLLRWRSDISVIDF---RGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+IGT S RR ++++ +F RG I+TR+NKL+ I+LA +G+KR+ +
Sbjct: 122 MIIGTGSKRRS---YQFKASYPKAEFEPIRGNIDTRINKLHTQNLDGIILAASGLKRISR 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I + + P+P QG + ++T N+ + ++ + + ERA+L E++
Sbjct: 179 ENEISHYFDEKTMIPAPCQGILALQTRTNDYQVIAVLSKVEDRCSRIQYIAERAYLEEIE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C + + + G + Y + G + G +A +GR A+ ++
Sbjct: 239 GGCHAPVGAYCEINGDKITIYAVYGDEQGNKLIRDNITGATDNADELGRTLAKKMKL 295
>gi|284047314|ref|YP_003397654.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684]
gi|283951535|gb|ADB54279.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684]
Length = 314
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 117/202 (57%), Gaps = 13/202 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A S L D + +IP++T GDR R L G K +
Sbjct: 4 LRIGTRASALALVQAEHVASLLRDGGA----QVEVIPITTSGDR--GRLL---GDKSRWV 54
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L++ E+D AVHSAKD+P +L G ++ R D RD A SL+ L +
Sbjct: 55 KELEAALLADEVDVAVHSAKDVPAELPDGFVLAGVPARADARDALCG--AASLEQLPDGA 112
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR A L R D+ V+ RG ++TRL KL + +A AI+LA AG++RL + I
Sbjct: 113 VVGTSSLRRAAELRALRPDLGVVALRGNVDTRLRKLADGQAAAIVLAVAGLERLDRGAAI 172
Query: 186 KEILNIEDFPPSPGQGAICIET 207
+L+ P+PGQGA+ +ET
Sbjct: 173 GAVLD--QLVPAPGQGALALET 192
>gi|240171918|ref|ZP_04750577.1| porphobilinogen deaminase [Mycobacterium kansasii ATCC 12478]
Length = 317
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 138/275 (50%), Gaps = 14/275 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAATVRDALIANG----HPAELVTISTAGDR--SSAPIETLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR D RD ++ L +L S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAEDPRFTIAAIPPRNDPRDAVVARDGLVLGELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAADHRLAAVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + +G++F E+S G
Sbjct: 236 APVGAIAEVVES--------IDEEGRVFEELSLRG 262
>gi|11498841|ref|NP_070070.1| porphobilinogen deaminase [Archaeoglobus fulgidus DSM 4304]
gi|6225498|sp|O29026|HEM3_ARCFU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|2649337|gb|AAB90000.1| porphobilinogen deaminase (hemC) [Archaeoglobus fulgidus DSM 4304]
Length = 289
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 151/294 (51%), Gaps = 17/294 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LALA + L + +++ I + T GD + ++ L E G G F
Sbjct: 5 VGTRGSKLALAQTNKVAERLKERYEVE-----IRIVKTAGDIMKDKPLYEFKGMGAFVRA 59
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ L G++D AVHS KD+P++ ++G ++A + R+ DV IS +L++L +V+
Sbjct: 60 LDTALAEGKVDVAVHSFKDVPSQRVEGTVVAAVIERDSPCDVLISRDGSTLEELDEGAVV 119
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L R R D+ + RG ++TRL KL AI++A AG+KRL ++ ++
Sbjct: 120 GTSSLRRRAQLSRLRGDLRFENLRGNLDTRLRKLREGNYDAIVVAEAGLKRLGLDREVE- 178
Query: 188 ILNIEDFPPS-----PGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ FPP QG I I T ++LV +N E TW ERA + EL
Sbjct: 179 ---YQPFPPEVIVPPANQGIIAIATRKGE---EDLVAFLNDEKTWLEAMVERAVIKELGV 232
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + +A + I+ ++ ++S++ +A IG+D + I
Sbjct: 233 GCAVPVGVYAEAQSRVRLICEILDKKYLRVEEKLSKDTAVEEAAEIGKDLRKEI 286
>gi|195170703|ref|XP_002026151.1| GL16182 [Drosophila persimilis]
gi|194111031|gb|EDW33074.1| GL16182 [Drosophila persimilis]
Length = 630
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 22/288 (7%)
Query: 2 EKKPFRIGTRCSPLAL---AHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
++K R+G+R S LAL H L + H +ST GDR+ N +L +I
Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGPTPELYLKQRFEIHT-----MSTFGDRVLNVSLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTA 115
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQG 118
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
++ L SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA
Sbjct: 119 HTIASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E
Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272
R+FL L G C + +A ++ +G L G V + DG I
Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAI 286
>gi|296423212|ref|XP_002841149.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637383|emb|CAZ85340.1| unnamed protein product [Tuber melanosporum]
Length = 349
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 147/280 (52%), Gaps = 8/280 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K RIG+R S LAL R SL ++ P N II ++T GD + L G K
Sbjct: 28 RKNIRIGSRKSKLALVQTHLVRDSLQAIY--PDTNFEIIAMTTTGDNNQTKPLHNFGAKA 85
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T+E+E L+ +++ VHS KDMPT+L G +I A L RED RD + T +SL+
Sbjct: 86 LWTQELEVLLLEDKLEMIVHSLKDMPTQLPHGCKIGAILEREDPRDALVMKTGSSYKSLE 145
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
DL SV+GTSS+RR A + + ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 146 DLPEGSVVGTSSVRRSAQIKKRYPHLNFEDVRGNVGTRLAKLDDPASSYTCLILAAAGLI 205
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + I L+ + GQGA+ +E + ++++V+ H++T ER+ +
Sbjct: 206 RLDLGERITGYLSSPCLLHAVGQGALGVEIRDGDEDTAKMLRVLGHKETTLHCLAERSLM 265
Query: 238 AELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEV 276
L+G C I + +V++ DG+ F V
Sbjct: 266 RTLEGGCSVPIGVETETATNGQMLMRAVVVSLDGQNFVNV 305
>gi|86131003|ref|ZP_01049602.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134]
gi|85818414|gb|EAQ39574.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134]
Length = 304
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L D H + ++P+ + GD I ++ L E+G G+
Sbjct: 3 KTIRIGTRDSELALWQAKTVQKQLED-HG---YTTELVPVKSTGDLILDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + A K
Sbjct: 59 FTKTLDVAMLNGTVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKGAPDYKQ--- 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRR+A L + D RG + TRL KL + + A AG+KR+
Sbjct: 116 ACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRI---N 172
Query: 184 VIKEILNIEDFP-PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E + D+ P+P QGA+ + + ++E +N T + ER FL L+G
Sbjct: 173 VLPENYEVLDWMIPAPAQGAMLVVAMEEDAFSKEACAKLNDRTTALCTHIEREFLRTLEG 232
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + I A + F G++ + DG EV + + +A+ G D A
Sbjct: 233 GCTAPIGALAQEIDGAIRFKGVLFSLDGATKIEVEQVVSTENALGFGTDCA 283
>gi|296123437|ref|YP_003631215.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776]
gi|296015777|gb|ADG69016.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 138/271 (50%), Gaps = 7/271 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A SL + P + ++ ++T GDR+ L + GG+G+FT
Sbjct: 4 LRIATRASQLALWQANFVADSLRSLD--PELTVELVHVTTTGDRVQGEPLRQFGGQGVFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----LKDL 121
E++ L+ G D AVHS KD+PT GL+++A R + D + T S L L
Sbjct: 62 REVQAALLEGRADIAVHSLKDLPTVPTAGLELAAVPARAPVADALLLPTGHSGPASLAML 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGT S RR+A LLR R D+ + RG ++TR+ KL+ + ++LA AG+ RL
Sbjct: 122 PRGARIGTGSPRRQAQLLRIRPDLVCSEVRGNLDTRIRKLDAGEYEGLILAVAGLSRLGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I IL P+ GQGA+ +E + V + T +V+ ERA L L+
Sbjct: 182 SDRISLILAPPTMFPAAGQGALGLECRHGDEATIRWVSQLEDRQTRLAVDAERAVLRTLE 241
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGK 271
C + + +A K TL+ I++A DG
Sbjct: 242 AGCHAPVGTWASWKSPETLHLEAILIAPDGS 272
>gi|327398182|ref|YP_004339051.1| porphobilinogen deaminase [Hippea maritima DSM 10411]
gi|327180811|gb|AEA32992.1| porphobilinogen deaminase [Hippea maritima DSM 10411]
Length = 299
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 147/268 (54%), Gaps = 16/268 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K +IGTR S LAL A + L D I+P+ T GD+ T++ L ++GGKG
Sbjct: 5 RKQLKIGTRGSKLALWQAEFAKKRLED----KGFECEIVPIKTSGDK-TDKPLYQLGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIEK L+ ID AVHS KDM + + R+ D+F+S L ++
Sbjct: 60 LFIKEIEKALLDKTIDIAVHSLKDMSVFEDERFDFIVF-ERDYWEDIFVSFEGNFL-EIK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ +GTSSLRR+A LL++R D +D RG ++TRL KL + + AI+++ +G+KRL
Sbjct: 118 KNARVGTSSLRRRAELLQYRDDFEFVDLRGNLDTRLKKLRDGEVDAIVVSKSGLKRL--- 174
Query: 183 KVIKE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E + ++ P+ GQG I +E +++ + ++ +K + E T ++ ERAF+ +
Sbjct: 175 GLYDEAYMYDLRFATPAAGQGVIAVE-FLSDFEFRDELKQLEDEKTRICIDSERAFVRQF 233
Query: 241 DGSCKSAIAGFAYCKGSTLYF---YGIV 265
+ SC I A + + YG V
Sbjct: 234 NASCNYPIGALARFEQDEFFMQITYGFV 261
>gi|118472022|ref|YP_885356.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155]
gi|118173309|gb|ABK74205.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155]
Length = 318
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 143/286 (50%), Gaps = 16/286 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A R +L+ P +VII ST+GDR + +IG G+FT
Sbjct: 9 IRLGTRGSLLATTQAGTVRDALLAAGH--PCELVII--STEGDR-NQGPIADIG-IGVFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT + I A RED RD ++ L +L S
Sbjct: 63 AALREAIHDGRVDMAVHSYKDLPTASDERFCIPAIPRREDPRDALVARDGLVLGELPTGS 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRLN++ + + I++A AG+ R+ + V+
Sbjct: 123 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVTSGELDGIVVARAGLARIGRLNVV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 183 TETLEPVQMLPAPAQGALAVECRAGDTELIAILSELDDADTRAAVTAERVLLAELEAGCS 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
+ + A S + DG +F E+S G C A G D
Sbjct: 243 APVGAIAEVVES--------IDEDGNVFEELSLRG--CAATLDGSD 278
>gi|313227065|emb|CBY22212.1| unnamed protein product [Oikopleura dioica]
Length = 382
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 150/281 (53%), Gaps = 20/281 (7%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
G+R S LA+ +S L + P I I + TKGD++ + L++IG K LFT+E+
Sbjct: 6 GSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLFTKEL 63
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------SHTAQSLKDLA 122
E L G++ VHS KDMPT L +G+ +S L RE D + +SL L
Sbjct: 64 EIALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSLDQLE 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------NKAHAILLAYAGI 176
++IG+SSLRRKA L R + + RG + TRL KL+N + A++LA AG+
Sbjct: 124 KTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILARAGL 183
Query: 177 KRLKKEKV-----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
+R+ ++ + E L+ + + GQGA+ IET + K EL+ ++HE+T V
Sbjct: 184 ERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETTLRVV 243
Query: 232 CERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGK 271
ER+F+ L+G C + +A + K + L G V + DGK
Sbjct: 244 AERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGK 284
>gi|331003909|ref|ZP_08327398.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411929|gb|EGG91329.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 311
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 144/269 (53%), Gaps = 24/269 (8%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LALA + +++ + P I IP+ST GD+ + +L EIGGKG
Sbjct: 4 KNIIRIGTRKSALALAQSKLVGDAIL--NSFPHIKIEYIPMSTAGDKRLDISLQEIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV------FISHTAQ 116
LFT+E+E+ LI+G ID AVHSAKD+P + L++ L R + D+ F+ T
Sbjct: 62 LFTKELEEALINGNIDLAVHSAKDLPLEFDHRLKLMPVLKRAPVNDILAVKKDFLKET-- 119
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
+K L IGTSS RR+ LL DI +I RG + TR+ K+ +N ++LA AGI
Sbjct: 120 DIKTLPEGFRIGTSSKRREKQLLFLNKDIKIIPVRGNVITRIEKIFSNDVDGVILAAAGI 179
Query: 177 KRLK-KEKVIKE---------ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
+RLK +K E I+NI +D P+P QG +C E N + + +++ I
Sbjct: 180 ERLKANDKYAAEFKDILDKISIINIREKDILPAPAQGILCAEYA--NDEMETILEKIQDG 237
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAY 253
+ ER +LA L C ++ + Y
Sbjct: 238 ECNTLFFAERKYLAVLQADCHTSAGIYIY 266
>gi|217077158|ref|YP_002334874.1| porphobilinogen deaminase [Thermosipho africanus TCF52B]
gi|217037011|gb|ACJ75533.1| porphobilinogen deaminase [Thermosipho africanus TCF52B]
Length = 280
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 137/250 (54%), Gaps = 10/250 (4%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
++GTR S LAL L K+ + +IP+ TKGD I + + EIGGKG+F
Sbjct: 4 KVGTRGSKLALIQTNMVVERLK--SKLSNVSFEVIPIKTKGD-IVKKPVGEIGGKGVFVS 60
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
+IEK L++GEID A+HS KDMP+K+ GL +++ L RED RDVF+ L L +
Sbjct: 61 DIEKLLLNGEIDIAIHSMKDMPSKIPDGLYLTSVLKREDARDVFVGKKDFFL--LESGAK 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSS RR L R DI ++ RG ++TRL ++ + I+LA AG+KRL EK I
Sbjct: 119 IGTSSKRRMLQLSILRPDIEIVPIRGNVDTRLKRI--GELDGIVLAAAGLKRLGLEKKIT 176
Query: 187 EILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+IE P+P QG + +E T P +++ I DT ER L+ C
Sbjct: 177 NYFSIEQVVPAPCQGILALEFTSKFLPLFEKVKDEIVDPDTEFVSKIERKVLSISGFDCN 236
Query: 246 SAIAGFAYCK 255
+ GF YC+
Sbjct: 237 TPF-GF-YCE 244
>gi|289811310|ref|ZP_06541939.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 235
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 111/209 (53%)
Query: 81 VHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLR 140
+HS KD+P GL + RED RD F+S+ SL DL S++GTSSLRR+ L
Sbjct: 1 MHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAE 60
Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ 200
R D+ + RG + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQ
Sbjct: 61 RRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQ 120
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
GA+ IE +++ + Q L+ +NH T V ERA L+G C+ I +A ++
Sbjct: 121 GAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIW 180
Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+V A DG + R G+ A +G
Sbjct: 181 LRALVGAPDGSVMVRGERRGSPEQAEQMG 209
>gi|260061130|ref|YP_003194210.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501]
gi|88785262|gb|EAR16431.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501]
Length = 315
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 145/296 (48%), Gaps = 13/296 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LAL A R L + H ++P+ + GD + ++ L E+G G+
Sbjct: 3 RALRIGTRDSELALWQAQTVRDRL----EAAGHRAELVPVKSTGDLVLDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L+ +ID AVHS KD+PT L +G+ +A L R RDV + + L L
Sbjct: 59 FTKTLDVALLREDIDLAVHSMKDVPTALPEGICQAAVLERASARDVLVH---KGLGFLDG 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRRKA L V RG + TRL L N + A AG++R+
Sbjct: 116 PGTIATGSLRRKAQWLNRYPAHQVTGLRGNVNTRLKLLRENSWDGAIFAQAGLERIGLLP 175
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E L+ P+P QGA+ + ++ A+E + ++HE + V ER FL L+G
Sbjct: 176 DNAEPLDW--MLPAPAQGAMLVVARTSDTAAREAARPLHHEQSALEVAVEREFLRTLEGG 233
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG----RDAAQY 295
C + I + L+ G + + DGK V+R+ +A G +DA ++
Sbjct: 234 CSAPIGARVHAADGQLHLEGGLFSLDGKKAFRVTRHTGSLEAGGTGDARFQDAGEF 289
>gi|261417417|ref|YP_003251100.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373873|gb|ACX76618.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 351
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 28/277 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----------NIVIIPLSTKGDR 49
M RI TR S LALA +++ + + + ++ ++T+GDR
Sbjct: 1 MSDLKLRIATRKSALALAQTTMAADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD
Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120
Query: 110 FISHTAQS---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
F+S + DL + +GT S+RR L R D+ + RG I+TR+ KL +
Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKL--AEL 178
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE---------- 216
++LA AG+KR+ + E + E P+ GQG + IET +N+ QE
Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIET-LNDATVQESRVTGRADLA 237
Query: 217 -LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
++ +N T+ + E A+L L+ C+ +A FA
Sbjct: 238 QILARVNDVATYCIASAEMAYLKALNAGCQFPVASFA 274
>gi|302325361|gb|ADL24562.1| hydroxymethylbilane synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 351
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 28/277 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----------NIVIIPLSTKGDR 49
M RI TR S LALA +++ + + + ++ ++T+GDR
Sbjct: 1 MSDLKLRIATRKSALALAQTTMVADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD
Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120
Query: 110 FISHTAQS---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
F+S + DL + +GT S+RR L R D+ + RG I+TR+ KL +
Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKL--AEL 178
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE---------- 216
++LA AG+KR+ + E + E P+ GQG + IET +N+ QE
Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIET-LNDATVQESRVTGRADLA 237
Query: 217 -LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
++ +N T+ + E A+L L+ C+ +A FA
Sbjct: 238 QILARVNDVATYCIASAEMAYLKALNAGCQFPVASFA 274
>gi|86133880|ref|ZP_01052462.1| Porphobilinogen deaminase [Polaribacter sp. MED152]
gi|85820743|gb|EAQ41890.1| Porphobilinogen deaminase [Polaribacter sp. MED152]
Length = 530
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 151/297 (50%), Gaps = 10/297 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K RIGTR S LAL A + R L ++ + I+P+ + GD I ++ L E+G G
Sbjct: 2 QKTIRIGTRESQLALWQANKVRKQLEELG----YETEIVPIKSTGDIILDKPLYELGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L++ +ID AVHS KD+PT L +G+ A L R + D+ + +
Sbjct: 58 IFTKNLDIALLNEDIDIAVHSLKDVPTALPEGIMQGAVLKRANYSDLLVLKDTEEFFGQP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
+I T SLRRKA+ L V D RG + TRL+KL N++ + + A AG++RL
Sbjct: 118 -GGIIATGSLRRKAMWLNRYPTHKVEDLRGNVNTRLSKLENSETWNGAIFAAAGLERLGL 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ K + + P+P QGAI + + + + +NH +T V ER FL L+
Sbjct: 177 RE--KGAIPLTWMIPAPAQGAIMLACLEKDQFVIDACEQLNHYETKVCVGIEREFLRLLE 234
Query: 242 GSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C + I AY K + F GI+L DG V++ + +D A Y+
Sbjct: 235 GGCTAPIGALAYVDEKTQEINFKGILLKRDGSKKITVTKTAKLGSHRYLAKDCADYV 291
>gi|229490699|ref|ZP_04384537.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121]
gi|229322519|gb|EEN88302.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121]
Length = 324
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 147/290 (50%), Gaps = 22/290 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ P +VII TKGD+ T+ + +IG G+F
Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAAGH--PAELVII--KTKGDQSTD-PVQKIG-VGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 65 TAELREALVDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-NHED--TWDSVNCERAFLAELD 241
I E + P+P QGA+ +E N EL ++ H+D T +V ERA LA L+
Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSAN---AELAAILAEHDDAGTRAAVTAERALLAGLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
C + + A S L DG+IF E+S G C A G D
Sbjct: 242 AGCTAPVGAIAEIVES--------LDDDGRIFDELSVRG--CAAAIDGSD 281
>gi|255949632|ref|XP_002565583.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592600|emb|CAP98957.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 330
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 147/274 (53%), Gaps = 10/274 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R SL + P + I L T GDR L + G K L+
Sbjct: 10 PLRIGTRRSNLAVVQAEGIRDSLKRIA--PERSYEIETLRTLGDRDQLTALYDFGAKSLW 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121
T E+E+KL+SGE+D VH KDMPT L +++A PR+D RD I ++ S+K+L
Sbjct: 68 TTELEEKLVSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIVKSSLPYTSIKEL 127
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL KL+N + ++++ AG++R+
Sbjct: 128 PKGAVVGTSSVRRSAQLRRLYPYLRFANIRGNVETRLAKLDNPASEYTCMVMSAAGLERV 187
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
++ I + L +D + GQGA+ +E + K QEL+ + + + ER+ +
Sbjct: 188 GRKFRINQYLCSKDGGIFHAVGQGALGLEIRKGDTKTQELLDQLADRKSTLACLAERSLM 247
Query: 238 AELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDG 270
L+G C I + + L +V++ DG
Sbjct: 248 RTLEGGCSVPIGVETEWIRSDVLKITALVVSLDG 281
>gi|205374358|ref|ZP_03227156.1| porphobilinogen deaminase [Bacillus coahuilensis m4-4]
Length = 252
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 140/250 (56%), Gaps = 9/250 (3%)
Query: 8 IGTRCSPLALAHA---FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL E L IV TKGD I + TL+++GGKGLF
Sbjct: 6 VGSRRSTLALTQTNWVIEQLKQLGGNFTFEVKEIV-----TKGDVILDVTLSKVGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ ++ EID AVHS KDMP++L GL + PRED RD IS LKDL
Sbjct: 61 VKEIEQAMMDKEIDMAVHSMKDMPSELPSGLTLGCVPPREDRRDALISKNHVKLKDLPKG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+VIGTSSLRR A LL R D+ + RG I+TRL KL+ + AI+LA AG+ R+ K
Sbjct: 121 AVIGTSSLRRGAQLLAVRPDLDIKWIRGNIDTRLAKLDGEEYDAIILAAAGLARMGWAKD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V+ E L+ + P+ GQGA+ IE ++ + +L+ N ++T + ER FL +++G
Sbjct: 181 VVTEFLSEDICVPAIGQGALGIECREDDEELLDLLSKFNDKETERTTKAERTFLHKMEGG 240
Query: 244 CKSAIAGFAY 253
S Y
Sbjct: 241 VPSPNCRICY 250
>gi|194212756|ref|XP_001501130.2| PREDICTED: similar to hydroxymethylbilane synthase [Equus caballus]
Length = 348
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 KVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLDISPXRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRM-------------GQGALGVEVRAKDQDILDLVGVLHDPETLLCCLAERAFLRH 243
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+G C +A K LY G V + DG
Sbjct: 244 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDG 274
>gi|320168193|gb|EFW45092.1| porphobilinogen deaminase [Capsaspora owczarzaki ATCC 30864]
Length = 333
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 141/277 (50%), Gaps = 10/277 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59
M + R+G+R S LAL +T S + + I + +ST GD + +R L++IG
Sbjct: 1 MSGRVVRVGSRKSELAL---IQTNSVIARLKAIYSDCTFELTTMSTTGDNVLDRALSKIG 57
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ 116
K LFT+E+E L E+D VHS KD+PT L G+ I A R+ D I
Sbjct: 58 EKSLFTKELEVALAQNEVDLVVHSLKDLPTTLPPGMTIGAICKRDSPYDAVILRAKFAGL 117
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-ILLAYAG 175
+L L SVIGTSSLRR A L R + D RG + TRL KL++ + +A ++LA AG
Sbjct: 118 TLATLPEGSVIGTSSLRRIAQLRRAFPHLVFRDVRGNLNTRLRKLDDAETYAGLILAEAG 177
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ + + EIL E + GQGA+ IE N+ EL+K + DT ERA
Sbjct: 178 LDRMGWQGRVSEILKPEVTLYAVGQGALAIECRENDTATLELLKPLQDNDTTLRCTAERA 237
Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDG 270
F+ L+G C + S+ L G V + DG
Sbjct: 238 FMRSLEGGCSVPLGVHTEFDASSGQLRLRGGVFSLDG 274
>gi|297564830|ref|YP_003683802.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
gi|296849279|gb|ADH62294.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
Length = 294
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 152/300 (50%), Gaps = 17/300 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LALA +TR + + + P + TK ITNR+ G
Sbjct: 6 IGTRGSLLALA---QTRWVVERLKENWPE----VEFRTK--TITNRSEDPAAG------- 49
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ L EID A+H+ +D+P GL ++A R D R+ F+ +A+ L+DL +V+
Sbjct: 50 LQDALRKREIDIALHALRDLPPAQADGLHLTAVTRRVDPREAFVGRSAKRLEDLPDGAVV 109
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
G SLRRKA LL +R D+ V + +G ++ +L L + AI++ + RL I +
Sbjct: 110 GAPSLRRKAQLLAYRPDLVVRETKGDVDDQLEALGTGEYDAIIMPAGSLLRLDLRNRIDQ 169
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
++ E P+PGQGA+ +E + + A+EL +NH + D V ERAF+A L ++
Sbjct: 170 FVDPEILLPAPGQGALGLEVRLGDDYAEELAYSLNHRPSSDRVCAERAFVAALGVGLEAP 229
Query: 248 IAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+A A+ + TL G V + DG+ G+ +A+ +G + AQ + K +
Sbjct: 230 VAALAFVEDDGTLRLEGGVFSPDGREMIRGEIEGDASEAVELGSELAQDLLAEGGKEILE 289
>gi|283457696|ref|YP_003362282.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18]
gi|283133697|dbj|BAI64462.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18]
Length = 454
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 155/337 (45%), Gaps = 70/337 (20%)
Query: 1 MEKKPFRIGTRCSPLALAH---AFETRSSLMDVHKIPPH---------NIVIIPLSTKGD 48
M + +GTR S LAL A ET +SL H+ H + + + T+GD
Sbjct: 78 MSHHEYILGTRGSALALTQSRIAAETVTSLYTEHQA--HHGAADAEVVDFTLRTVKTEGD 135
Query: 49 RITNRTLTEIGGKGLFTEEIEKKLISGE-------IDCAVHSAKDMPTKLLKGLQISAYL 101
+T L +GG G+F + ++L+ GE +D AVHS KD+P+ GL I+A L
Sbjct: 136 VLTG-PLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVIAATL 194
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
RED RD ++ +L L S +GT S RR A L R D+ ++D RG + TR+ ++
Sbjct: 195 KREDPRDALVARDGLTLDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDIRGNVGTRIGRV 254
Query: 162 NNNKAH------------------------------AILLAYAGIKRLKKEKVIKEILNI 191
+ H A++LA +G+KRL KE++I E L+
Sbjct: 255 KGLEEHAGKQVVLRQNTETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDP 314
Query: 192 EDFPPSPGQGAICIETH-----------VNNPKAQELVKVI-------NHEDTWDSVNCE 233
P+PGQGA+ +E + +P+ V+ + NH +T +V+ E
Sbjct: 315 TRMLPAPGQGALALEVRESEFENPDPAVLADPEVARPVRALGRALLAANHHETRLAVSAE 374
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
RA L L+ C + I +A+ L +V + DG
Sbjct: 375 RALLRRLEAGCAAPIGAYAHVVEGDLVLSVVVASPDG 411
>gi|313905566|ref|ZP_07838929.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6]
gi|313469629|gb|EFR64968.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6]
Length = 299
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 150/299 (50%), Gaps = 9/299 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME IGTR S LAL L + K P ++ ++ ++T GDRI +R L +IGG
Sbjct: 1 MENNRIIIGTRESRLALVQTGMVADFLRE--KYPERSVELLKMTTTGDRILDRRLDQIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L +GE D VHS KD+P +L + L + RED RDV + + D
Sbjct: 59 KGLFVKELDRALAAGECDLCVHSMKDLPMELPEELPLLGCSRREDPRDVLVLPAGRKEPD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+L IGTSS RR + + D RG ++TRL KL+ ++LA AG+KR+
Sbjct: 119 PSLP--IGTSSRRRILQVQKLYPDAKFESVRGNLQTRLKKLDEGLYGGLILAAAGLKRMG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E+ P+ GQG + I+ + +L I+ T + ERAF+ L
Sbjct: 177 LENRISRYFSTEEVIPAAGQGVLAIQGRADTYDF-DLDGFIDP-GTMLATLAERAFVRRL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296
+G C +A + G +L G+ + ++ R+ + +A +GR A+ +
Sbjct: 235 NGGCSLPVAAYGEFDGESLALRGLYYDEEKRVSRTEERSAIVRTKEEAEALGRGLAEQL 293
>gi|154150777|ref|YP_001404395.1| porphobilinogen deaminase [Candidatus Methanoregula boonei 6A8]
gi|153999329|gb|ABS55752.1| porphobilinogen deaminase [Methanoregula boonei 6A8]
Length = 294
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 146/268 (54%), Gaps = 19/268 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIP--LSTKGDRITNRTLTEIGGKG 62
P RIGTR S LALA + + + KI I + +ST+GD +T L EIG +G
Sbjct: 2 PVRIGTRGSRLALAQ------TAIVIKKIEALGIEVEQKIISTQGDEVTGVPLHEIGKQG 55
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F ++ +++ EIDCAVHS KD+P G+ SA L R+ D +++ T ++
Sbjct: 56 VFVRALDDAILNNEIDCAVHSMKDIPAIRPSGVFTSAILKRDSPAD-YLAFTGP----VS 110
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
V+GTSS RR+A LLR + + D RG ++TR+ K++ + +A++LA AG+ RL
Sbjct: 111 AVKVVGTSSTRRRAQLLRHDPGLDIRDLRGNVDTRIRKMSEGQYNAVVLAEAGLSRLGI- 169
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ E L E F PSP QG I + + +P E++ ++H T V ERA + ++
Sbjct: 170 RIPGERLPPEKFVPSPNQGTIAVVSRA-DPSIMEVLSSLDHPATRKDVAIERAVMEQVGA 228
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C + + YCK +L VL+ DG
Sbjct: 229 GCFTPMG--IYCKDGSLIAE--VLSLDG 252
>gi|16081675|ref|NP_394046.1| porphobilinogen deaminase [Thermoplasma acidophilum DSM 1728]
gi|13627133|sp|Q9HKM5|HEM3_THEAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|10639740|emb|CAC11712.1| porphobilinogen deaminase related protein [Thermoplasma
acidophilum]
Length = 295
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A S++ + + + I+ ++GD L IG G+F
Sbjct: 4 IRIGTRPSRLAVRQAEIVASAI----RHAGYEVEIVKYRSEGDSDLKSPLYSIGKTGVFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E + ++SG+ID AVHSAKD+P ++ + L+ISA +PR D +S L L S
Sbjct: 60 ERLNSLILSGDIDAAVHSAKDIPYEIDRRLRISAVMPRGRFEDALVSENP--LSKLPPGS 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR+ +L R D+ V + RG ++TR+ K+ + I++A A I RL+
Sbjct: 118 VIGTSSLRRRYQILYQRKDVKVSNIRGNVDTRIEKMRSEGMAGIVMALAAIDRLE----- 172
Query: 186 KEILNI-------EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
LN+ E F P+P QG I + + + KA E++ IN DT+D + ER+
Sbjct: 173 ---LNLRYWPFDPEKFVPAPNQGIIAVVSE-DGSKASEVLSSINDADTYDDMMAERSITQ 228
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L C + + + G + A DG
Sbjct: 229 GLKLGCSTPVGILSRHTGKGMRILAQFFAMDG 260
>gi|315586235|gb|ADU40616.1| hydroxymethylbilane synthase [Helicobacter pylori 35A]
Length = 306
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK R G++ A+++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKERQGDKTKALDL 283
>gi|41410101|ref|NP_962937.1| porphobilinogen deaminase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254777076|ref|ZP_05218592.1| porphobilinogen deaminase [Mycobacterium avium subsp. avium ATCC
25291]
gi|55976459|sp|Q73SS0|HEM3_MYCPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|41398934|gb|AAS06553.1| HemC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 315
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 138/275 (50%), Gaps = 14/275 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L + + P +V I +T GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGVRDAL--IARGHPAELVTI--TTAGDRSSGPI--ESLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLAELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + DG+IF E+S G
Sbjct: 236 APVGAIAEVVES--------IDEDGRIFEELSLRG 262
>gi|297379462|gb|ADI34349.1| porphobilinogen deaminase [Helicobacter pylori v225d]
Length = 306
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ERAF+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLERAFVKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDL 283
>gi|269926448|ref|YP_003323071.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798]
gi|269790108|gb|ACZ42249.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798]
Length = 300
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 140/267 (52%), Gaps = 4/267 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LAL + L ++ P + + DR + ++ IG G+
Sbjct: 2 KVIKVGTRGSKLALWQTQWVINRLRSLY--PGFQFEPVVIKVTSDRSPDAPISAIGQVGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT++IE+ L++G+I AVHS KD+PT G I+A+ RED RD + Q + DL
Sbjct: 60 FTKDIEQALLAGDIHLAVHSLKDLPTLSTPGTVIAAFTEREDPRDCILWPKGQPMPDLN- 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+S +GTSS+RR AL+ + + +V++ RG ++TR+ K+ +L+AYA +KR+
Sbjct: 119 NSRVGTSSVRRSALVRSYWPNANVVNLRGNVDTRVRKMLEGNYDVVLMAYAAVKRMDLPV 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
K L ++ + PS GQG I ++ ++ + ++ IN + + ER+ + L G
Sbjct: 179 EFKP-LPLDSWVPSAGQGIIAVQAREDDQQIIGMLNAINFFPSKVAYLAERSLMRALGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270
C + +A L G+V A DG
Sbjct: 238 CSMPVGAYAELHDGELSLIGMVAAPDG 264
>gi|118467030|ref|YP_883768.1| porphobilinogen deaminase [Mycobacterium avium 104]
gi|158512461|sp|A0QLI0|HEM3_MYCA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118168317|gb|ABK69214.1| porphobilinogen deaminase [Mycobacterium avium 104]
Length = 315
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 138/275 (50%), Gaps = 14/275 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L + + P +V I +T GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGVRDAL--IARGHPAELVTI--TTAGDRSSGPI--ESLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLGELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + DG+IF E+S G
Sbjct: 236 APVGAIAEVVES--------IDEDGRIFEELSLRG 262
>gi|307195489|gb|EFN77375.1| Porphobilinogen deaminase [Harpegnathos saltator]
Length = 313
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 136/234 (58%), Gaps = 5/234 (2%)
Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE 104
TKGD+I +++L +IG K LFTEE+E+ L G +D VHS KD+PT L G+ + A L RE
Sbjct: 3 TKGDKILDKSLPKIGEKSLFTEELEQALGEGSLDFVVHSLKDLPTILPAGMALGALLKRE 62
Query: 105 DIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
D RD + ++L L SVIGTSSLRR A L R + V + RG + TRL KL
Sbjct: 63 DPRDAVVMSKKFKEKTLSTLPKGSVIGTSSLRRTAQLARNLPHLKVENIRGNLNTRLKKL 122
Query: 162 NNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
++ K+ AI+LA AG+KR+ + I +I+ E+ + GQGA+ +E ++ + + L++
Sbjct: 123 DDEKSAYAAIVLAAAGLKRIGWKDRISQIMEPEEALYAVGQGALGVECRESDWETRSLLE 182
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ +T CER+FL L G C + +A + +G L G V + DG+
Sbjct: 183 PLYDMETTLKCVCERSFLKTLGGGCSAPVAVASSLEGEELKITGAVWSLDGQTL 236
>gi|261837684|gb|ACX97450.1| porphobilinogen deaminase [Helicobacter pylori 51]
Length = 306
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ERAF+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLERAFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDL 283
>gi|302523839|ref|ZP_07276181.1| porphobilinogen deaminase [Streptomyces sp. AA4]
gi|302432734|gb|EFL04550.1| porphobilinogen deaminase [Streptomyces sp. AA4]
Length = 315
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 134/248 (54%), Gaps = 7/248 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA + D + + I+ ++T GD +++ +++IG G+FT
Sbjct: 5 IRIGTRGSKLALAQT----GIVADTIRATGAEVEIVTVTTPGD-LSSAPISQIG-VGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L+ EID AVHS KD+PT GL ++A PRED RD I+ +L +L +
Sbjct: 59 SALREALLRNEIDVAVHSYKDLPTAPEAGLVLAAVPPREDPRDALIARDGLTLGELPPGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + I
Sbjct: 119 KVGTGAARRMAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGRVDEI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELV-KVINHEDTWDSVNCERAFLAELDGSC 244
E L+ P+P QGA+ +E + + L+ ++ E T +V ERA LA L+ C
Sbjct: 179 TETLDPIQMLPAPAQGALALECRAADVDIEHLLASAVDDETTRVAVTAERALLAALEAGC 238
Query: 245 KSAIAGFA 252
+ + A
Sbjct: 239 SAPVGALA 246
>gi|305679995|ref|ZP_07402805.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC
14266]
gi|305660615|gb|EFM50112.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC
14266]
Length = 298
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 10/291 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LA A R +L H P ++ +T GD N E G G+FT+
Sbjct: 4 IGTRGSLLATTQAGHVRDALTS-HGYPSELRIV---TTTGD--VNLAPVERIGVGVFTQA 57
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALHSV 126
+ L++GE D AVHS KD+PT + + + +P RE+ RD I+ +L +L +V
Sbjct: 58 LRDSLLAGECDIAVHSFKDLPTAVDERFHL--VVPHRENARDCLIARNNLTLAELPTGAV 115
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT + RR A L R DI + RG I+TR+ K+++ + A++LAYAG+ R+ +
Sbjct: 116 VGTGAPRRIAQLKALRPDIHTVPLRGNIDTRMAKVHDGELDAVVLAYAGLSRVHRADEAT 175
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+ + +F P+P QGA+ +E ++ + I + + ER LA L+ C +
Sbjct: 176 EVFDPLEFLPAPAQGALAVECRADDADTIAAITTIADPKAYACAHTERVVLARLEAGCTA 235
Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+A +A + + + V+A DG + G A N+G A+ +
Sbjct: 236 PVAAYATVAADNIMTLHAAVIAVDGSATLRATAAGPIDTAENLGMTVARAL 286
>gi|294630701|ref|ZP_06709261.1| porphobilinogen deaminase [Streptomyces sp. e14]
gi|292834034|gb|EFF92383.1| porphobilinogen deaminase [Streptomyces sp. e14]
Length = 326
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 154/314 (49%), Gaps = 31/314 (9%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGLF 64
R+GTR S LA+A + + ++ V P + ++ ++T GD T+R L +IGG G+F
Sbjct: 1 MRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGD--TSREHLAQIGGTGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L GE+D AVHS KD+PT L ++A RED RDV ++ A DL
Sbjct: 56 VAALREALARGEVDFAVHSLKDLPTAQPAELVLAAIPEREDPRDVLVARDALKFADLPRG 115
Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +GT S RR A L + DI + RG ++TR+ ++ + A++LA AG+ R+
Sbjct: 116 ARVGTGSPRRMAQLNAYARAHGLDIETVPIRGNVDTRIGFVHGGELDAVVLAAAGLNRIG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + + L+++ P+PGQGA+ IE + + ++ T +V ER+ LA L
Sbjct: 176 RGDEVTDFLSVDTVLPAPGQGALAIECAADRADLVAALAELDDPHTRAAVTAERSLLAAL 235
Query: 241 DGSCKSAIAGFAYCKGST-----------------LYFYGIVLASDGKIFHEVSRNG--- 280
+ C + + A + + G+V +DG ++S G
Sbjct: 236 EAGCSAPVGALADLPPLSAPLERAEPQADRQIVKEMRLRGVVGTTDGSTLVQLSTTGPVP 295
Query: 281 -NRCDAINIGRDAA 293
DA+ +GR+ A
Sbjct: 296 RTHDDAMALGRELA 309
>gi|308063099|gb|ADO04986.1| porphobilinogen deaminase [Helicobacter pylori Sat464]
Length = 306
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 152/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ERAF+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLERAFVKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A+++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKNKALDL 283
>gi|302535112|ref|ZP_07287454.1| porphobilinogen deaminase [Streptomyces sp. C]
gi|302444007|gb|EFL15823.1| porphobilinogen deaminase [Streptomyces sp. C]
Length = 322
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 157/306 (51%), Gaps = 17/306 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR S LA++ + + V I + ++ ++T GD ++ L +IGG G+
Sbjct: 7 QPLRLGTRRSKLAMSQSGHVAEA---VRAITGRPVELVEITTYGD-VSRENLAQIGGTGV 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L+ GE+D AVHS KD+PT L I+A RED RD ++ + + L
Sbjct: 63 FVTALRDALVRGEVDFAVHSLKDLPTAQPDELVIAAMPKREDPRDALVARDGLTFEQLPD 122
Query: 124 HSVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +GT S RR A L + RS + + RG ++TR+ + + + A++LA AG+ R+
Sbjct: 123 GARVGTGSPRRMAQLNAYARSLGKSVETVAIRGNVDTRIGFVRSGELDAVVLAAAGLNRI 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++L++++ P+PGQGA+ +E ++ + ++ T +V ERA LA
Sbjct: 183 GRADEATDLLSVDNVLPAPGQGALAVECLASDADLISALGRLDDPHTRAAVTAERALLAA 242
Query: 240 LDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290
L+ C + + A G + + G+V DG ++S G + +A+ +GR
Sbjct: 243 LEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGSTLVQLSTTGPVPQSYDEAMALGR 302
Query: 291 DAAQYI 296
+ A +
Sbjct: 303 ELADEM 308
>gi|188527044|ref|YP_001909731.1| porphobilinogen deaminase [Helicobacter pylori Shi470]
gi|238058919|sp|B2US69|HEM3_HELPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188143284|gb|ACD47701.1| porphobilinogen deaminase [Helicobacter pylori Shi470]
Length = 306
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E ++ L K +N E++ + ERAF+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLERAFVKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK R G++ A ++
Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVIAKERQGDKTKAFDL 283
>gi|315223357|ref|ZP_07865216.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287]
gi|314946688|gb|EFS98677.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287]
Length = 288
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 142/266 (53%), Gaps = 7/266 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A ++ L K + I+ + GD ++ L E+G G+FT
Sbjct: 4 IRIGTRDSELALWQAKTVQNQL----KTLGYATEIVSTKSHGDIELSKPLYEMGVTGIFT 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ ++ L++ EID AVHS KD+PT L +G+ + A L R + DV + S + + +
Sbjct: 60 KALDIALLNSEIDIAVHSMKDVPTALPEGIVVGAVLKRGNPHDVLVYKGDLSFLEAEIVT 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K+
Sbjct: 120 -IATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERIN--KLP 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ L ++ P+P QGAI + N Q+ + ++ + T+ + ER FL L+G C
Sbjct: 177 EKHLVLDWMLPAPAQGAIVVVVREANVALQKKLLPLHDDYTYIATQLERDFLRALEGGCT 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271
+ I FA K LYF G + + DGK
Sbjct: 237 APIGAFAEFKDDKLYFKGGLWSEDGK 262
>gi|149369456|ref|ZP_01889308.1| porphobilinogen deaminase [unidentified eubacterium SCB49]
gi|149356883|gb|EDM45438.1| porphobilinogen deaminase [unidentified eubacterium SCB49]
Length = 313
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 148/300 (49%), Gaps = 20/300 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L + + ++P+ + GD + ++ L E+G G+
Sbjct: 3 KVIRIGTRDSELALWQANTVKRQLESLG----YKTELLPVKSTGDLVLDKPLYEMGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +++G +D AVHS KD+PT L KG+ +A L R DV ++ S D
Sbjct: 59 FTKTLDVAMLNGTVDIAVHSMKDVPTALPKGIIQTAVLERAMTEDVLVT---TSEIDYTK 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRRKA L +V+D RG ++TRL KL +N + A AG+ RL E
Sbjct: 116 PCTIATGSLRRKAQWLNRYPHHTVVDLRGNVQTRLQKLKDNPWDGAIFAKAGLDRL--EY 173
Query: 184 VIKEILNIEDFP----------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+ + DF P+P QGA+ I T N+ + V +N+ E
Sbjct: 174 LNNTEITSPDFSGTFENLSWMLPAPAQGAMVIVTLQNDDFTTKAVSKLNNTAADICTQIE 233
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
R FL +L+G C + I A + F G + + DGK EV + ++ + N G DAA
Sbjct: 234 RDFLRKLEGGCTAPIGALAQVVEENIQFTGCLFSLDGKTKIEVEKTIDKNNN-NGGVDAA 292
>gi|317177053|dbj|BAJ54842.1| porphobilinogen deaminase [Helicobacter pylori F16]
Length = 306
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L + ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSMESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLEREFVKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A+++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDL 283
>gi|289705146|ref|ZP_06501550.1| hydroxymethylbilane synthase [Micrococcus luteus SK58]
gi|289558174|gb|EFD51461.1| hydroxymethylbilane synthase [Micrococcus luteus SK58]
Length = 377
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 139/285 (48%), Gaps = 47/285 (16%)
Query: 5 PFRIGTRCSPLA------LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
P RIGTR S LA +A A RS L H +V+I T+GD +T +L +
Sbjct: 3 PLRIGTRGSALATTQTTHVAEALTERSGLA-------HELVVI--RTEGD-VTTGSLASL 52
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GG G+F + ++ G +D AVHS KD+P + L+I+A R D+RD + +L
Sbjct: 53 GGTGVFASALRAAVLDGAVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTL 112
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH----------- 167
L + +GT S RR A L R D+ ++D RG ++TRL ++ + H
Sbjct: 113 ATLPEGARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAAGSP 172
Query: 168 -----AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NP 212
A++LA AG+ RL + VI E ++ E P+PGQGA+ +E +P
Sbjct: 173 RGDLDAVILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAVEIRAEDESFLGRALLDP 232
Query: 213 KA-----QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
+A +++++ DT +V ERA L L+ C + I A
Sbjct: 233 QAPVGRLHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVA 277
>gi|182437949|ref|YP_001825668.1| porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778585|ref|ZP_08237850.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1]
gi|178466465|dbj|BAG20985.1| putative porphobilinogen deaminase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326658918|gb|EGE43764.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1]
Length = 328
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 154/303 (50%), Gaps = 19/303 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGL 63
P R+GTR S LA+A + + V ++ + ++ ++T GD T+R L +IGG G+
Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEA---VREVTGRAVELVEITTYGD--TSREHLAQIGGTGV 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + + L+ GE+D AVHS KD+PT L ++A RED RD I+ + L
Sbjct: 69 FVAALREALVRGEVDFAVHSLKDLPTFQPDDLVLAAVPQREDPRDALIARDGLTFGQLPE 128
Query: 124 HSVIGTSSLRRKALLLRW-RSD---ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +GT S RR A L + RS I + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 129 GARVGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRL 188
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + E L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA
Sbjct: 189 GRSGEVTEFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRAAVTAERALLAA 248
Query: 240 LDGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290
L+ C + + A G L G+V +DG ++S G + DA IGR
Sbjct: 249 LEAGCSAPVGALADLLVDGQVVNELRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAAIGR 308
Query: 291 DAA 293
+ A
Sbjct: 309 ELA 311
>gi|312878897|ref|ZP_07738697.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260]
gi|310782188|gb|EFQ22586.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260]
Length = 301
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
TR SPLA +TR MD + + +ST GDR L GG G F + +E
Sbjct: 5 TRGSPLA---RIQTRG-WMDALESLGAETTLQAVSTHGDRDRTTPLPCFGGFGAFVKALE 60
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+KL++GE D AVHS KD+P +GL ++ LPR + D+ ++ SL+ L + +G+
Sbjct: 61 EKLLAGEGDGAVHSLKDVPVAQPEGLVLAGVLPRGPVGDLLVTREGLSLETLPPGARVGS 120
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189
SSLRR A LR R D+ + RG ++TRL KL + A++LA AG++RL + + +
Sbjct: 121 SSLRRTAQGLRVRKDLRFLCCRGNVQTRLRKLEAGELDALILAEAGVRRLGLD--LPGAV 178
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ F +PGQGA+ +E + + L + NH TW V ER L C + +A
Sbjct: 179 RL-PFLSTPGQGAVALEARAGS-VLESLARQTNHLPTWLEVCGERQVLGAFGKGCSAPVA 236
Query: 250 GFAYCKGSTLYFYGIVLASDG 270
+G L VLA DG
Sbjct: 237 VQGRYEGGVLTLEAEVLALDG 257
>gi|88802327|ref|ZP_01117854.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P]
gi|88781185|gb|EAR12363.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P]
Length = 531
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 149/297 (50%), Gaps = 10/297 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K RIGTR S LAL A + R L + + V++P+ + GD + L E+G G
Sbjct: 2 QKIIRIGTRDSQLALWQANKVRKELAGLG----YESVLVPIKSSGDINLDTPLYEMGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L+ G+ID AVHS KD+PT L KG+ +A L R + DV + + +
Sbjct: 58 IFTKSLDIALLEGKIDIAVHSLKDVPTALPKGIVQAAVLKRGNYNDVLVLNGTEEFFG-E 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
+I T SLRRKA+ L V RG ++TRL KL +K + + A AG++RL
Sbjct: 117 EQGLIATGSLRRKAMWLDRYPTHKVAPLRGNVQTRLEKLETSKTWNGAVFAAAGLERLGI 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ +++ P+P QGAI I + + + INH +T V ER FL L+
Sbjct: 177 TP--EDTVDLPWMLPAPAQGAIMIAALEKDDFTLDACEQINHHETSVCVGVEREFLRLLE 234
Query: 242 GSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C + I AY T + F ++L DG V++ + +D A Y+
Sbjct: 235 GGCTAPIGALAYVDARTDEVNFKAVLLKKDGSKKIRVAKTAKFGSHKFLAKDCADYV 291
>gi|326201521|ref|ZP_08191392.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782]
gi|325988121|gb|EGD48946.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782]
Length = 297
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 143/261 (54%), Gaps = 7/261 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKGL
Sbjct: 6 KKIRIGSRDSKLAIIQSEMVMAAIREFD--PDIELELITMKTTGDKILDKTLDKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L + E+D VHS KDMP + L + A RED RD F+ ++ ++
Sbjct: 64 FVKELDYALYNNEVDITVHSYKDMPLEDNPELPVVAVSKREDPRDAFVLPQGENTEN--- 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 121 NEPIGSSSQRRQLQLKALFPNHKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++++ P+ QG I ++ + + +K+ + E++ + ER F+ E++G
Sbjct: 181 RISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISHAERTFVREMNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGI 264
C + IA +A S + G+
Sbjct: 239 CSTPIAAYATIVESEIILKGL 259
>gi|317181546|dbj|BAJ59330.1| porphobilinogen deaminase [Helicobacter pylori F57]
Length = 306
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 153/286 (53%), Gaps = 5/286 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IG+R S LAL A + L I ++ TKGD+I + L +IGGKGL
Sbjct: 2 KKLVIGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDAPLNKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 59 FTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 119 GAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQG 178
Query: 184 V-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ ++E+ PS GQGA+ +E ++ L K +N E++ + ERAF+ L+G
Sbjct: 179 AKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLERAFVKGLNG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
C+ I A G + ++ +GK + G++ A+++
Sbjct: 238 GCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDL 283
>gi|255326986|ref|ZP_05368062.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296]
gi|255296203|gb|EET75544.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296]
Length = 377
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 155/337 (45%), Gaps = 70/337 (20%)
Query: 1 MEKKPFRIGTRCSPLALAH---AFETRSSLMDVHKIPPHNIVIIP---------LSTKGD 48
M + +GTR S LAL A ET +SL H+ H+ P + T+GD
Sbjct: 1 MSHHEYTLGTRGSALALTQSRIAAETVTSLYTEHQA--HHGAENPEAVSFELRTVKTEGD 58
Query: 49 RITNRTLTEIGGKGLFTEEIEKKLISGE-------IDCAVHSAKDMPTKLLKGLQISAYL 101
+T L +GG G+F + ++L+ GE +D AVHS KD+P+ GL ++A L
Sbjct: 59 VLTG-PLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVVAATL 117
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
RED RD ++ ++ L S +GT S RR A L R D+ ++D RG + TR+ ++
Sbjct: 118 KREDPRDALVARDGLTVDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDVRGNVGTRIGRV 177
Query: 162 NNNKAH------------------------------AILLAYAGIKRLKKEKVIKEILNI 191
+ H A++LA +G+KRL KE++I E L+
Sbjct: 178 KGLEEHAGKQVVLRQNAETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDP 237
Query: 192 EDFPPSPGQGAICIETH-----------VNNPKAQELVKVI-------NHEDTWDSVNCE 233
P+PGQGA+ +E + +P+ V+ + NH +T +V+ E
Sbjct: 238 TRMLPAPGQGALALEVRESEFENPDSAVLADPEVARPVRALGRALLAANHHETRLAVSAE 297
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
RA L L+ C + I +A+ L +V + DG
Sbjct: 298 RALLRRLEAGCAAPIGAYAHVVEGDLVLNVVVASPDG 334
>gi|256787075|ref|ZP_05525506.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 303
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 139/261 (53%), Gaps = 12/261 (4%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88
V ++ + ++ ++T GD T+R L +IGG G+F + L+ GE+D AVHS KD+P
Sbjct: 11 VSQVTGRPVELVEITTYGD--TSREHLAQIGGTGVFVAALRDALLRGEVDFAVHSLKDLP 68
Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS----D 144
T +GL ++A RED RDV ++ A+ L DL + +GT + RR A L + +
Sbjct: 69 TAQHEGLVVAAIPEREDPRDVVVARDARKLTDLPRGARVGTGAPRRMAQLNAYARTHGME 128
Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204
I + RG ++TR+ + + + A++LA AG+ R+ + + + L+++ P+PGQGA+
Sbjct: 129 IETVPIRGNVDTRIGYVRSGELDAVVLAAAGLNRVGRIDEVTDFLSVDTVLPAPGQGALA 188
Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA--YCKGST---L 259
+E +N + ++ T +V ER+ LA L+ C + + A G T +
Sbjct: 189 VECAADNASLIAALAELDDPFTRAAVTAERSLLAALEAGCSAPVGALADLLADGQTVKEM 248
Query: 260 YFYGIVLASDGKIFHEVSRNG 280
G+V +DG ++S G
Sbjct: 249 RLRGVVGTTDGSTLVQLSTTG 269
>gi|217033471|ref|ZP_03438901.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10]
gi|216944176|gb|EEC23604.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10]
Length = 306
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFTTLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A+++
Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDL 283
>gi|295131995|ref|YP_003582671.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87]
gi|294980010|gb|ADF50475.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87]
Length = 304
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 145/276 (52%), Gaps = 10/276 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A +S+L + H ++P+ + GD + L E+G G+
Sbjct: 3 KVIRIGTRDSELALWQAKTVQSALEKL----GHQTELVPVKSTGDLNLDVPLYEMGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +++G++D AVHS KD+PT L KG+ +A L R + +D+ I H D
Sbjct: 59 FTKTLDIAMLTGKVDIAVHSMKDVPTALPKGIVEAAVLKRANTKDILI-HKGTDFLD--A 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRRK+ L V+D RG + TR+ KL ++ + + A AG++R++ +
Sbjct: 116 QGTIATGSLRRKSQWLHRYPTHEVVDLRGNVNTRMQKLEDSNWNGAIFAAAGLERIEIKP 175
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ ++++ P+P QGA+ + + + + +NH T V+ ER FL L+G
Sbjct: 176 --ENFIDLDWMIPAPAQGAMLVVALEKDEFTRTAIGALNHYQTDLEVHVEREFLRTLEGG 233
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSR 278
C + I A + L+F G + + DG EV +
Sbjct: 234 CTAPIGALAKIDNDNILHFKGALFSLDGSQKIEVEK 269
>gi|325102976|ref|YP_004272630.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145]
gi|324971824|gb|ADY50808.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145]
Length = 532
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LAL A S L + + I + T+GD I N L ++ GKG FT
Sbjct: 5 FKIGTRGSDLALWQANHVASKLNEAG----YQTEIKIIKTQGDNILNLRLDKLEGKGFFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF--ISHTAQSLKDLAL 123
+E+E+ L++G+ID AVHS KD+PT+ GL ISA RED +V + + K L++
Sbjct: 61 KELEEHLLAGDIDLAVHSHKDLPTENPPGLFISAVSEREDPSEVLLILKDCVDTSKKLSV 120
Query: 124 --HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180
+ ++GTSS RR++ + R D+ D RG + TR+ KL + AI+LA AG+ RL
Sbjct: 121 KHNGLVGTSSNRRQSQISSVRPDLEFEDLRGNVNTRIQKLRDENYDAIVLAKAGVSRLNL 180
Query: 181 --KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFL 237
E I+ I + + P+P QG + ++ + + ++K VI++++ + ++ ER L
Sbjct: 181 DLSEFYIETIEPVAEMIPAPAQGVLAVQIREGDSELDAVLKEVIHNQEVANCISVERKVL 240
Query: 238 AELDGSCKSAIAGFAYCK 255
+G C + +YCK
Sbjct: 241 NLFNGGCHMPLG--SYCK 256
>gi|160937983|ref|ZP_02085340.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC
BAA-613]
gi|158438977|gb|EDP16732.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC
BAA-613]
Length = 302
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 136/269 (50%), Gaps = 14/269 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL L V P + I+ T GDRI ++ L E GGKG+F
Sbjct: 5 IRIGTRKSALALIQTQLVADELRQV--CPGIQVEIVTKDTLGDRILDKPLQEFGGKGVFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E E+ + G ID AVHSAKD+P +L +GL I+A RED RDV ++ ++ ++
Sbjct: 63 SEFEQAIQEGVIDLAVHSAKDLPMELAQGLTIAAVSGREDPRDVLVTMRGHRIRPESVVR 122
Query: 126 VIGTSSLRR--KALLL---RW--RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
IGTSS RR +A L+ W + RG + TRL KL I+LA AG+KR
Sbjct: 123 -IGTSSPRRQLQARLMCKTLWPEAAGAECSTLRGNVHTRLRKLEEENFDGIILAAAGLKR 181
Query: 179 ---LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
L+++ L E+F P+ GQG + +E A L + ++H ++ ER+
Sbjct: 182 LGLLEQDTYEYTFLAPEEFIPAGGQGLMAVEAKAGT-AAHSLAQAMDHAQGRLCLDLERS 240
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGI 264
L +LD C I ++ + L +GI
Sbjct: 241 VLKQLDAGCHEPIGIYSVLQNGQLEVWGI 269
>gi|160879516|ref|YP_001558484.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
gi|160428182|gb|ABX41745.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
Length = 295
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 145/292 (49%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ + S+ H +I + T GD I +++L +IGGKGLF
Sbjct: 4 IRIGSRESELAVRQSRILIDSIKQYHN--EIETELITMKTTGDIILDKSLDKIGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ LI G D +VHS KDMP + + L I A+ RED RD + + D L
Sbjct: 62 KELDLALIEGRSDLSVHSLKDMPMETPEELPILAFSKREDPRDALVLPLGCTEIDPVLP- 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IG SS RR L + + RG + TRL KL+ + A++LA AG+KRL E I
Sbjct: 121 -IGCSSQRRMLQLKKIYPGANYKGIRGNVLTRLEKLDRGEYGALVLAAAGLKRLGLESRI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
I E+ P+ GQG + ++ ++ E +K ++E+ CERAF+ L+G C
Sbjct: 180 SRIFTTEEIIPAAGQGILAVQGRAG--ESYEFLKQFHNEEATFQAVCERAFVKTLNGGCS 237
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S +A +A + + G+ + + G + DA +G A +R
Sbjct: 238 SPVAAYAKVEDEMITVTGLYFDEITGDYITGNLTGKKEDAEQLGEMLANKLR 289
>gi|28572887|ref|NP_789667.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27]
gi|28411020|emb|CAD67405.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27]
Length = 321
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 142/280 (50%), Gaps = 20/280 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A + + ++ DV + ++I S + G F
Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSVRR------------RDGSF 50
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ GE D AVHS KD+P +G I+A LPRED DV + +L L
Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E
Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168
Query: 185 IKEILNIEDFPPSPGQGAICIET---HVNNPKAQELVKV-INHEDTWDSVNCERAFLAEL 240
I E +I D+P + GQG++ IE +++P+ + V +++ + ER L+ L
Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228
Query: 241 DGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSR 278
C S IA A + +L + V + DGKIF E R
Sbjct: 229 QADCFSPIAVHAVYTANDKSLRLHAKVFSRDGKIFCESIR 268
>gi|302387415|ref|YP_003823237.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1]
gi|302198043|gb|ADL05614.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1]
Length = 300
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K RIGTR S LA+A A +L +V+ T+GDRI ++ L E GG
Sbjct: 1 MKSKTIRIGTRRSALAVAQANIMAEALERTGTGLSAELVLKL--TEGDRILDKPLLEFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F E E+ L+ GEID AVHSAKD+P +L +GL I A L RED RDV ++ + L
Sbjct: 59 KGVFVTEFEQALLRGEIDFAVHSAKDLPMELEEGLGIVAVLEREDPRDVLVTPASGILSG 118
Query: 121 LALHSVIGTSSLRRKALL-----LRW-RSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+IGTSSLRRK + W + + + RG + TRL+KL I+LA A
Sbjct: 119 -KREIIIGTSSLRRKIQIEEIGKTMWPEALVRCENLRGNVLTRLSKLMEGSYDGIILAAA 177
Query: 175 GIKRL---KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
G+KRL + + + + F P+ GQG + +E +++ + +VK + E+ +
Sbjct: 178 GLKRLGLWEDSRYHYHCFDCDTFIPAGGQGILAVEGRLDSG-LEAVVKSLEDEEARLCLT 236
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264
ER L L+ C I ++ K + GI
Sbjct: 237 MERKILKLLNAGCHEPIGVYSRLKNGEIEILGI 269
>gi|239918007|ref|YP_002957565.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
gi|259646260|sp|C5CB88|HEM3_MICLC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|239839214|gb|ACS31011.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
Length = 377
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 139/286 (48%), Gaps = 47/286 (16%)
Query: 4 KPFRIGTRCSPLA------LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
P RIGTR S LA +A A RS L H +V+I T+GD +T +L
Sbjct: 2 SPLRIGTRGSALATTQTSHVAEALTARSGLA-------HELVVI--RTEGD-VTTGSLAS 51
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
+GG G+F + ++ G +D AVHS KD+P + L+I+A R D+RD + +
Sbjct: 52 LGGTGVFASALRAAVLDGVVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLT 111
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH---------- 167
L L + +GT S RR A L R D+ ++D RG ++TRL ++ + H
Sbjct: 112 LATLPEGARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAVGS 171
Query: 168 ------AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------N 211
A++LA AG+ RL + VI E ++ E P+PGQGA+ +E +
Sbjct: 172 PRGDLDAVILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAMEIRAEDESFLGRALLD 231
Query: 212 PKA-----QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+A +++++ DT +V ERA L L+ C + I A
Sbjct: 232 PEAPVGRLHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVA 277
>gi|154508275|ref|ZP_02043917.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC
17982]
gi|153797909|gb|EDN80329.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC
17982]
Length = 344
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 33/315 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAF-------ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR 53
M + F +GTR S LALA + E + L + ++ N+ ++ T GD ++
Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRV---NLEVV--RTHGD-VSAA 54
Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113
L +GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD +
Sbjct: 55 PLAALGGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAA 114
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------ 161
+L L +++GT S RR A +L R D+ V D RG + TRL+++
Sbjct: 115 DGATLASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGADAGTA 174
Query: 162 -----NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQ 215
+ A++LA AG++R+ + ++L+ P+ QGA+ IET ++P +
Sbjct: 175 PSALGTGERLDAVVLALAGLRRIGLDAHATDVLDPAIMMPAASQGALAIETRDEDDPLLR 234
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIF 273
L+ +NH T + + ERA L+ L C + + FA S L V++ DG+
Sbjct: 235 ALLGTLNHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRER 294
Query: 274 HEVSRNGNRCDAINI 288
E S + D++ +
Sbjct: 295 VEASGSLALTDSVGL 309
>gi|262201010|ref|YP_003272218.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247]
gi|262084357|gb|ACY20325.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247]
Length = 313
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 140/273 (51%), Gaps = 14/273 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A +L + P +VII T GD + + EIG G+F
Sbjct: 8 PIRIGTRGSLLATTQAQTIADALTEAGH--PAELVII--RTAGDD-SAAPVAEIG-VGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T I L + E+D AVHS KD+PT GL I+A PRED RD +S L +L
Sbjct: 62 TTAIRIALHNREVDVAVHSYKDLPTADEPGLYIAAVPPREDPRDALVSRDNMVLGELPPG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGTS+ RR A L + + RG +++RL K+ + + A+++A AG+ R+ +
Sbjct: 122 STIGTSAPRRVAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAVVVARAGLVRIGRADE 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E + P+P QGA+ +E ++ + ++ ++ E T +++ ERA LA L+ C
Sbjct: 182 VTESFDPVVLLPAPAQGALAVECRSDDAQLVRILAELDDESTRAAIDAERAVLAALEAGC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+ I A S + DG+IF E+S
Sbjct: 242 TAPIGAIAEVVES--------IDDDGRIFAELS 266
>gi|169779115|ref|XP_001824022.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83772761|dbj|BAE62889.1| unnamed protein product [Aspergillus oryzae]
Length = 342
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 154/301 (51%), Gaps = 15/301 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F +GTR S LAL+ S+L V+ P + I T GD T E K
Sbjct: 17 RKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTKN 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + SL
Sbjct: 75 LWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSLS 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
DL SV+GTSS+RR A L + VID RG I TRL KL+ ++ I+LA AG+
Sbjct: 135 DLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGLL 194
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER+
Sbjct: 195 RLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAERS 254
Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C + + + K S L IV++ DGK EV +G+ D++
Sbjct: 255 LLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGS-VDSVQAAE 313
Query: 291 D 291
D
Sbjct: 314 D 314
>gi|220928704|ref|YP_002505613.1| porphobilinogen deaminase [Clostridium cellulolyticum H10]
gi|254800245|sp|B8I0Q8|HEM3_CLOCE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219999032|gb|ACL75633.1| porphobilinogen deaminase [Clostridium cellulolyticum H10]
Length = 293
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 141/261 (54%), Gaps = 7/261 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKGL
Sbjct: 2 KKIRIGSRDSKLAIIQSEMVMAAIREFD--PDIELELITMKTTGDKILDKTLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L + E+D VHS KDMP + L + A RED RD F+ + ++
Sbjct: 60 FVKELDYALYNNEVDITVHSYKDMPLEDNPKLPVVALSKREDPRDAFVLPQGEIAEN--- 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 117 NEPIGSSSQRRQLQLKALFPNRKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 176
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++++ P+ QG I ++ + + +K+ + E++ ER F+ E++G
Sbjct: 177 RISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISQAERTFVREMNGG 234
Query: 244 CKSAIAGFAYCKGSTLYFYGI 264
C + IA +A S + G+
Sbjct: 235 CSTPIAAYATIVESEIILKGL 255
>gi|118376440|ref|XP_001021402.1| porphobilinogen deaminase family protein [Tetrahymena thermophila]
gi|89303169|gb|EAS01157.1| porphobilinogen deaminase family protein [Tetrahymena thermophila
SB210]
Length = 362
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLST------------- 45
++ + F+I +R S LAL+ +E L+ V ++ N ++P+S
Sbjct: 16 LKNRKFKIASRSSQLALSQTYEVIDLLVGVKELGLTKENFEVVPISNAPGKNCTLKFKIN 75
Query: 46 --------KGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97
KGD+ L +GG G+FT+ +E +L++ D AVHS KD+PT + + L I
Sbjct: 76 ITNKQFTNKGDQNLKDPLYVMGGVGVFTKIVEVELLNKNGDIAVHSLKDLPTIIDERLFI 135
Query: 98 SAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154
A P + DV I H + LKDL SVIGTSSLRR L + + RG +
Sbjct: 136 GAVPPLKPRGDVVIFNEKHKGKELKDLPEGSVIGTSSLRRITNLKNRYPHLKYENIRGNL 195
Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA 214
TRL KL N + AI+LA AG+ RL + + + L EDF +PGQGA+ ++ ++ +A
Sbjct: 196 NTRLTKLENGQYDAIILAEAGVFRLGWIEKVGQFLKQEDFLYAPGQGALGVQCRADDKEA 255
Query: 215 QELVKVINHEDTWDSVNCERAFLAELDG---SCKSAIAGFAYCKGSTLYFYGIV 265
L+ IN ++ V+ ER FL +L+G CK IA + TL G V
Sbjct: 256 IALLSYINQKEPRIRVDAERQFLNKLEGVILGCKLPIAVHSEIIDQTLRLTGQV 309
>gi|28493699|ref|NP_787860.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist]
gi|28476741|gb|AAO44829.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist]
Length = 321
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 142/280 (50%), Gaps = 20/280 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A + + ++ DV + ++I S + G F
Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSVRR------------RDGSF 50
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ GE D AVHS KD+P +G I+A LPRED DV + +L L
Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E
Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168
Query: 185 IKEILNIEDFPPSPGQGAICIET---HVNNPKAQELVKV-INHEDTWDSVNCERAFLAEL 240
I E +I D+P + GQG++ IE +++P+ + V +++ + ER L+ L
Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228
Query: 241 DGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSR 278
C S IA A + +L + V + DGKIF E R
Sbjct: 229 QADCFSPIAVHAVYTANDKSLGLHAKVFSRDGKIFCESIR 268
>gi|320582367|gb|EFW96584.1| Phorphobilinogen deaminase [Pichia angusta DL-1]
Length = 413
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 14/276 (5%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RIG+R S LA+ + + ++ P I+ LST GD++ N+ L GGK L+T+
Sbjct: 83 RIGSRKSQLAVVQSEIVGIGIQKLY--PKLQTPIVKLSTLGDQVQNKPLYSFGGKSLWTK 140
Query: 67 EIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
E+E L+ +ID VHS KDMPT L ++ L RED RD + +SL
Sbjct: 141 ELEVLLLQSFGEFEQIDMIVHSLKDMPTSLPDEFELGCILQREDPRDALVMRKDSPYKSL 200
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
DL SV+GTSS+RR A LL+ ++ RG + TR+NKL+ ++ ++LA AG+
Sbjct: 201 SDLPDGSVVGTSSVRRSAQLLKNHPNLRFKSIRGNLNTRINKLDAPDSDYACVILAAAGL 260
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I + L E+ + GQGA+ +E N+PK +++ + ++ + T ER
Sbjct: 261 IRINMGHRITQFLGPEEMLYAVGQGALGVEIRKNDPKMKKICQRLDCKSTSIRCRAEREL 320
Query: 237 LAELDGSCKSAIAGFA-YCKGS-TLYFYGIVLASDG 270
L L+G C + ++ Y K + LY +VL+ +G
Sbjct: 321 LRTLEGGCSVPVGVWSDYNKDTHELYMKSVVLSVEG 356
>gi|168334266|ref|ZP_02692463.1| uroporphyrinogen III synthase/methyltransferase [Epulopiscium sp.
'N.t. morphotype B']
Length = 785
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 143/265 (53%), Gaps = 14/265 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F +GTR S LA+A + + + + +I II TKGD IT L +IG KGLF
Sbjct: 5 FTVGTRGSALAIAQTKQIIALMQQQNPDATFSIKII--QTKGDAITEIPLDKIGDKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQIS---AYLPRED---IRDVFISHTAQSLK 119
EIE +L+SG+ID A+HS KD+P+ + GL I+ A PR+D +RD IS SL
Sbjct: 63 SEIEHQLLSGQIDIAIHSYKDLPSNITPGLIIAHPPARAPRQDALVLRDGTIS----SLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ ++ I T SLRRK LL R D++V+ RG I+TRL KL++ I++A AG+ RL
Sbjct: 119 AIPRNATIATGSLRRKLQLLHHRPDLNVVPIRGNIDTRLKKLSD--VDGIVIAAAGLARL 176
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I + + P+ QGAI I+ + A I+ T V+ ERAFL+
Sbjct: 177 DLAHKISYLFPEDILVPAAAQGAIAIQCRATDTTAIACANSISDSTTALEVSAERAFLSA 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGI 264
+DGSC + A+ T+Y I
Sbjct: 237 IDGSCHIPVGATAHLIDDTMYLKAI 261
>gi|55976374|sp|Q6AB05|HEM3_PROAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|313772844|gb|EFS38810.1| porphobilinogen deaminase [Propionibacterium acnes HL074PA1]
gi|313802779|gb|EFS43997.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA2]
gi|313806434|gb|EFS44941.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA2]
gi|313810983|gb|EFS48697.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA1]
gi|313815286|gb|EFS53000.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA1]
gi|313817301|gb|EFS55015.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA2]
gi|313824153|gb|EFS61867.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA2]
gi|313826520|gb|EFS64234.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA1]
gi|313828701|gb|EFS66415.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA2]
gi|313831749|gb|EFS69463.1| porphobilinogen deaminase [Propionibacterium acnes HL007PA1]
gi|313840063|gb|EFS77777.1| porphobilinogen deaminase [Propionibacterium acnes HL086PA1]
gi|314916105|gb|EFS79936.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA4]
gi|314917026|gb|EFS80857.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA1]
gi|314921302|gb|EFS85133.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA3]
gi|314955012|gb|EFS99418.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA1]
gi|314959051|gb|EFT03153.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA1]
gi|314961324|gb|EFT05425.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA2]
gi|314977093|gb|EFT21188.1| porphobilinogen deaminase [Propionibacterium acnes HL045PA1]
gi|314989126|gb|EFT33217.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA3]
gi|315078439|gb|EFT50470.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA2]
gi|315082761|gb|EFT54737.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA2]
gi|315086120|gb|EFT58096.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA3]
gi|315087704|gb|EFT59680.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA1]
gi|315102048|gb|EFT74024.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA1]
gi|327331372|gb|EGE73111.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA2]
gi|327333359|gb|EGE75079.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA3]
gi|327334882|gb|EGE76593.1| hydroxymethylbilane synthase [Propionibacterium acnes HL097PA1]
gi|327449721|gb|EGE96375.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA2]
gi|327454571|gb|EGF01226.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA3]
gi|327456643|gb|EGF03298.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA2]
gi|328755626|gb|EGF69242.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA1]
gi|328756706|gb|EGF70322.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA2]
gi|328761895|gb|EGF75405.1| hydroxymethylbilane synthase [Propionibacterium acnes HL099PA1]
gi|332674709|gb|AEE71525.1| porphobilinogen deaminase [Propionibacterium acnes 266]
Length = 334
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 26/267 (9%)
Query: 6 FRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
R+GTR S LA A RS +DV+ + ++T GD T +L +GG
Sbjct: 4 IRLGTRASTLATTQSEMVAGLLRSEGLDVN--------LTTITTHGDTSTA-SLAAMGGI 54
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL
Sbjct: 55 GVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDL 114
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------NNNKA--HAILL 171
+ +GT S RR A LL R D++++D RG ++TRL ++ N K A++L
Sbjct: 115 PQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVL 174
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWD 228
A +G+ RL + E L+ P+P QGA+ +E + + +L K + D T
Sbjct: 175 AASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRL 234
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCK 255
+ ERA L+ L+ C + I A K
Sbjct: 235 AATAERAVLSHLEAGCAAPIGALAQLK 261
>gi|121713720|ref|XP_001274471.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL
1]
gi|119402624|gb|EAW13045.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL
1]
Length = 339
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 14/291 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LAL+ S+L + P + I T GDR T L E K
Sbjct: 14 RKTFTIGTRSSKLALSQTDLIASALK--KRWPDYTFEIHSRETAGDRNTTIALREFTTKN 71
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T+E+E+ L++G++D VHS KD+PT L + RED RDV + SL
Sbjct: 72 LWTQELEELLMAGDVDLIVHSLKDVPTLLPSSCTLGPMTEREDSRDVLVMKKGLPRMSLS 131
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
++ SV+GTSS+RR A L R + + D RG I TRL KL+ + I+LA AG+
Sbjct: 132 EMPEGSVVGTSSIRRTAQLARRYPHLKIQDVRGNIGTRLAKLDAEDSPFTCIILAAAGLL 191
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL + I + L+ ++ + GQGA+ +E ++ E+++ I H++T + ER+
Sbjct: 192 RLGLDDRITQYLDSKNGGMLYAVGQGALGVEIRKDDQLLHEMLQTIGHKETTLACLAERS 251
Query: 236 FLAELDGSCKSAIA-GFAYCKGST----LYFYGIVLASDGKIFHEVSRNGN 281
L L+G C + + + K ST L +V++ DG+ E+ +G+
Sbjct: 252 LLRTLEGGCSAPLGVETEWVKDSTGASKLRMRAVVVSVDGRESAEIEVDGS 302
>gi|308061591|gb|ADO03479.1| porphobilinogen deaminase [Helicobacter pylori Cuz20]
Length = 306
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E ++ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A+++
Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDL 283
>gi|238499723|ref|XP_002381096.1| hydroxymethylbilane synthase, putative [Aspergillus flavus
NRRL3357]
gi|220692849|gb|EED49195.1| hydroxymethylbilane synthase, putative [Aspergillus flavus
NRRL3357]
Length = 337
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 154/301 (51%), Gaps = 15/301 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F +GTR S LAL+ S+L V+ P + I T GD T E K
Sbjct: 17 RKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTKN 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + SL
Sbjct: 75 LWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSLS 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
DL SV+GTSS+RR A L + VID RG I TRL KL+ ++ I+LA AG+
Sbjct: 135 DLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGLL 194
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER+
Sbjct: 195 RLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAERS 254
Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C + + + K S L IV++ DGK EV +G+ D++
Sbjct: 255 LLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGS-VDSVEAAE 313
Query: 291 D 291
D
Sbjct: 314 D 314
>gi|145592441|ref|YP_001154443.1| porphobilinogen deaminase [Pyrobaculum arsenaticum DSM 13514]
gi|158514284|sp|A4WN24|HEM3_PYRAR RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|145284209|gb|ABP51791.1| hydroxymethylbilane synthase [Pyrobaculum arsenaticum DSM 13514]
Length = 297
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 147/299 (49%), Gaps = 8/299 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+ TR S L++ E + + V I I+ T GD + ++ L +IG KG+F +E
Sbjct: 5 VATRGSKLSMLQTEELLAQIKAVEPSIEFEIKIV--KTTGDEVQDKPLYQIGVKGIFEKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+ ++ GE D AVHS KD+P++L GL ++ + R D +S L+ L +++
Sbjct: 63 VNLAVLRGEADVAVHSLKDLPSELSPGLVLAGFSKRAPPFDAVVSTAGYVLETLPRGALV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEKVI 185
GTSS+RR + R D+ V RG ++TR+NK+ K A ++A AGI RL +
Sbjct: 123 GTSSVRRAEFVKAIRPDVRVEPLRGNVDTRINKILQGKYDAAIMAVAGIYRLYGASPPIK 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L E PP PGQG + + +L+K + ER FL + C
Sbjct: 183 LAVLRPEVLPPPPGQGIVAAVVREADSWLIDLLKKASDPKASLEAIAEREFLKAVGAGCH 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
AI G A+ + T+ F AS G+ + V G+ D + +GR AA+ IR + +V
Sbjct: 243 VAIGGVAFARNDTVEFIA-GYASGGRKYI-VRVVGD--DPVEVGRRAAEEIRKFKDGDV 297
>gi|238508247|ref|XP_002385322.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus
NRRL3357]
gi|220688841|gb|EED45193.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus
NRRL3357]
Length = 333
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 144/278 (51%), Gaps = 12/278 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R SL P + I L T GD+ + L G K
Sbjct: 9 QPPLRIGTRRSKLAIVQAEGIRDSLQKTA--PNRSYEIETLHTLGDKDKSTALYNFGAKS 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL+
Sbjct: 67 LWTSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSLQ 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
L +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG++
Sbjct: 127 TLPEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGLE 186
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ + I + + +D + GQGA+ +ET + QEL+ + E + + ERA
Sbjct: 187 RIGLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAERA 246
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFY---GIVLASDG 270
L L+G C I + YF IV++ DG
Sbjct: 247 LLRTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDG 284
>gi|169784578|ref|XP_001826750.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83775497|dbj|BAE65617.1| unnamed protein product [Aspergillus oryzae]
Length = 333
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 144/278 (51%), Gaps = 12/278 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R SL P + I L T GD+ + L G K
Sbjct: 9 QPPLRIGTRRSKLAIVQAEGIRDSLQKTA--PNRSYEIETLHTLGDKDKSTALYNFGAKS 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL+
Sbjct: 67 LWTSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSLQ 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
L +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG++
Sbjct: 127 TLPEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGLE 186
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ + I + + +D + GQGA+ +ET + QEL+ + E + + ERA
Sbjct: 187 RIGLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAERA 246
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFY---GIVLASDG 270
L L+G C I + YF IV++ DG
Sbjct: 247 LLRTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDG 284
>gi|323691803|ref|ZP_08106060.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum
WAL-14673]
gi|323504169|gb|EGB19974.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum
WAL-14673]
Length = 297
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 139/259 (53%), Gaps = 8/259 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ ++ + ++ ++ P + ++ + T GD I +++L +IGGKGLF
Sbjct: 7 RIGSRESVLAV---IQSELIIEEIKRVCPGVSAQLVTMKTTGDMILDKSLEQIGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + + L+ L
Sbjct: 64 KELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLR--KGLESLPAGP 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+ E I
Sbjct: 122 VIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMGFEGRI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++++ PS GQG + ++ + +K ++ D+ ERAF+ LDG C
Sbjct: 182 SRYFSVDEIIPSAGQGIMAVQGRKED--YFPFIKEVDAPDSRAMALAERAFVRILDGGCS 239
Query: 246 SAIAGFAYCKGSTLYFYGI 264
S A A LY G+
Sbjct: 240 SPCAACAEAAAGRLYLRGL 258
>gi|145254797|ref|XP_001398757.1| porphobilinogen deaminase [Aspergillus niger CBS 513.88]
gi|134084341|emb|CAK48681.1| unnamed protein product [Aspergillus niger]
Length = 334
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 150/287 (52%), Gaps = 13/287 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LAL +++L P + I T GD+ T L + K
Sbjct: 14 RKTFTIGTRKSKLALLQTDLVQAALK--QTWPDYEFKIHSRETAGDQNTTIALRDFTTKN 71
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-----SHTAQS 117
L+T+E+E LI+G++D VHS KD+PT L + + RED RDV + S+T S
Sbjct: 72 LWTQELEDLLIAGQVDFIVHSLKDVPTLLPSSCTLGPMMKREDTRDVLVMKKGLSYT--S 129
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAG 175
L +L SV+GTSS+RR A L R + V+D RG I TRL+KL+ ++LA AG
Sbjct: 130 LAELPEGSVVGTSSIRRTAQLARRYPHLKVMDVRGNIGTRLSKLDAEDGPFTCLILAAAG 189
Query: 176 IKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+ RL I L+ ++ + GQGA+ IE ++ + ++++ I H++T + E
Sbjct: 190 LLRLDLGDRITSYLDSKNGGMLYAVGQGALGIEIRKDDQQVLDMLQNIGHKETTFACLAE 249
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
R+ L L+G C + + + L IV++ DGK EV +G
Sbjct: 250 RSLLRTLEGGCSAPLGVESEWVNGALTMRSIVVSVDGKESAEVEVDG 296
>gi|295837224|ref|ZP_06824157.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197699853|gb|EDY46786.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 328
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 26/301 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP R+GTR S LA+A + ++ + P + ++ ++T GD + L IGG
Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VALVEITTYGD-TSREHLARIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ G++D AVHS KD+PT + L ++A RED RD I+ +L+
Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEELVLAAIPRREDPRDALIARDGLALEQ 116
Query: 121 LALHSVIGTSSLRRKALL-LRWRS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L R+ I + RG ++TR+N + + + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRTAQLNAHARAHGLGIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + + + L + P+PGQGA+ +E P A+ L + ++ T +V ERA
Sbjct: 177 HRLGRGAEVTQYLAPDTVLPAPGQGALAVECP-PGPLAEALAR-LDDPYTRAAVAAERAL 234
Query: 237 LAELDGSCKSAIAGFAYCKGST----------------LYFYGIVLASDGKIFHEVSRNG 280
LA L+ C + + A T + G+V ++DG +++ G
Sbjct: 235 LATLEAGCSAPVGALADFPDGTQDQAARPNEPARQTTEMRLRGVVGSTDGSALVQLTTTG 294
Query: 281 N 281
+
Sbjct: 295 H 295
>gi|325967722|ref|YP_004243914.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28]
gi|323706925|gb|ADY00412.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28]
Length = 305
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S L+L + L V P +I + T GD + ++ L IG KG+F
Sbjct: 3 IRIATRGSRLSLIQSDIVMRMLRRVE--PNIQFEVIIIRTTGDLVQDKPLYAIGTKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ L+ E D AVHS KD+P+++ GL I+ + PR+ DV + +AL S
Sbjct: 61 KEVNLALLKDEADIAVHSLKDLPSEISPGLVIAGFSPRDPPFDVLVVRNDYPSDLMALPS 120
Query: 126 --VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---- 179
+GTSS+RR+A LL R DIS+ RG ++TR+NKL A+++A AG+ RL
Sbjct: 121 GAKVGTSSVRRRAFLLSVRKDISINVIRGNVDTRINKLIRGDYDAVVIAEAGLVRLINDM 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K + + ++ PP+PGQG I + T + +L++ + ERAFL
Sbjct: 181 KSLHIRYARIPLDLLPPAPGQGIIAVVTREKDTNLIDLLRKASDPKAMVEALAERAFLRT 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYF 261
+ G C + G A G+ + F
Sbjct: 241 VGGGCHVPVGGIAIYDGNYMEF 262
>gi|158320361|ref|YP_001512868.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs]
gi|167008809|sp|A8MGE4|HEM3_ALKOO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158140560|gb|ABW18872.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs]
Length = 296
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 147/289 (50%), Gaps = 9/289 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LA+ ++ + + K P+ I ++ + T GD ++TL +IGGKGLF
Sbjct: 3 IRVGSRESKLAVK---QSEIVIEAIRKYDPNIEIELVTMKTTGDIKLDQTLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+++ L +D VHS KDMP + + L I A RED RDV + +++K+
Sbjct: 60 IKELDQALYDDRVDITVHSFKDMPMAIDEYLPIVAVSKREDPRDVLV--LPKTVKEPDFS 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG SS RRK L SV RG + TRL KL+ + AI LA AG+KRL E+
Sbjct: 118 KPIGCSSFRRKIQLQEIYPHCSVEPIRGNVLTRLEKLDRGEFSAITLALAGLKRLGLEER 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I I + + P+ QG I ++ + + + ++ WD ER+F+ L+G C
Sbjct: 178 ISRIFEVTEILPAACQGVIVVQARKGFDVS--FLSDFHDKEAWDISMAERSFVRTLNGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
S +A + K + L G+ + S + H+ + G R +G + A
Sbjct: 236 SSPVAAYGEIKDNYLTLTGLYVDSSNSV-HKKTITGARKQGEEMGFNLA 283
>gi|13627125|sp|Q49808|HEM3_MYCLE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 315
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 141/275 (51%), Gaps = 14/275 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L + P +VI+ +T GD+ ++ ++ +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAALVRDAL--IANGHPAELVIV--NTAGDQ-SSASIDSLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + G +D AVHS KD+PT ++A PR D RD ++ L +L S
Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + +G++F E+S G
Sbjct: 236 APVGAIAQVVES--------IDGEGRVFEELSLRG 262
>gi|15828303|ref|NP_302566.1| porphobilinogen deaminase [Mycobacterium leprae TN]
gi|221230780|ref|YP_002504196.1| porphobilinogen deaminase [Mycobacterium leprae Br4923]
gi|13093996|emb|CAC31937.1| porphobilinogen deaminase [Mycobacterium leprae]
gi|219933887|emb|CAR72519.1| porphobilinogen deaminase [Mycobacterium leprae Br4923]
Length = 318
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 141/275 (51%), Gaps = 14/275 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L + P +VI+ +T GD+ ++ ++ +G G+FT
Sbjct: 5 IRIGTRGSLLATTQAALVRDAL--IANGHPAELVIV--NTAGDQ-SSASIDSLG-VGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + G +D AVHS KD+PT ++A PR D RD ++ L +L S
Sbjct: 59 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 179 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + +G++F E+S G
Sbjct: 239 APVGAIAQVVES--------IDGEGRVFEELSLRG 265
>gi|50841792|ref|YP_055019.1| porphobilinogen deaminase [Propionibacterium acnes KPA171202]
gi|289424694|ref|ZP_06426477.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187]
gi|289428901|ref|ZP_06430581.1| hydroxymethylbilane synthase [Propionibacterium acnes J165]
gi|295129869|ref|YP_003580532.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137]
gi|50839394|gb|AAT82061.1| porphobilinogen deaminase, HemC [Propionibacterium acnes KPA171202]
gi|289155391|gb|EFD04073.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187]
gi|289157902|gb|EFD06125.1| hydroxymethylbilane synthase [Propionibacterium acnes J165]
gi|291376805|gb|ADE00660.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137]
Length = 366
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 26/267 (9%)
Query: 6 FRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
R+GTR S LA A RS +DV+ + ++T GD T +L +GG
Sbjct: 36 IRLGTRASTLATTQSEMVAGLLRSEGLDVN--------LTTITTHGDTSTA-SLAAMGGI 86
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL
Sbjct: 87 GVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDL 146
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------NNNKA--HAILL 171
+ +GT S RR A LL R D++++D RG ++TRL ++ N K A++L
Sbjct: 147 PQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVL 206
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWD 228
A +G+ RL + E L+ P+P QGA+ +E + + +L K + D T
Sbjct: 207 AASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRL 266
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCK 255
+ ERA L+ L+ C + I A K
Sbjct: 267 AATAERAVLSHLEAGCAAPIGALAQLK 293
>gi|213964875|ref|ZP_03393074.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46]
gi|213952411|gb|EEB63794.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46]
Length = 310
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 154/294 (52%), Gaps = 11/294 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+++ + P +VI+ T GD + + +IG G+FT
Sbjct: 7 IRIGTRGSELATTQAGHVRDALIELGQ--PAELVIV--KTAGDHNRHDPVEKIG-IGVFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L G D VHS KD+PT + ++A R D R+ IS A L DL +
Sbjct: 62 QALRHALREGVCDIIVHSFKDLPTVPEDDMMVAAVPERVDPREALISRDATPLMDLPEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L RSD+ ++ RG IETR+ +++ + A++LA AG++R + I
Sbjct: 122 RVGTSAPRRVSQLRALRSDLELVPLRGNIETRMGRVSED-LDAVILARAGLERTGRLGEI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+++ P+P QGA+ +E + + ++++ I+H + ERA L +L+ C
Sbjct: 181 AESLDVDVLMPAPAQGALALECRTADREIVDILRKIDHPVSHARAVAERAVLNKLEAGCT 240
Query: 246 SAIAGFAYCKGS-TLYFYGIVLASDG--KIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A +A S L V A DG ++ + N ++ D +GR A +
Sbjct: 241 APVAAYATVSDSGELTLQAGVFALDGSRQLLETATANVDKAD--ELGRKVAAAL 292
>gi|169631071|ref|YP_001704720.1| porphobilinogen deaminase [Mycobacterium abscessus ATCC 19977]
gi|238054424|sp|B1MHI5|HEM3_MYCA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169243038|emb|CAM64066.1| Porphobilinogen deaminase (HemC) [Mycobacterium abscessus]
Length = 306
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 22/289 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L + H ++ ++T GD+ + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGIRDAL----RAKGHEAELVIVTTAGDQ--SAAPVEQIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +D AVHS KD+PT I A PRED RD ++ L +L S
Sbjct: 56 AALREAIADDVVDVAVHSYKDLPTAADPRFVIPAIPPREDYRDALVARDGLVLGELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRL++++N +++A AG+ R+ + I
Sbjct: 116 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLSRVSNGDLDGVVVARAGLARIGRLDHI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV---INHEDTWDSVNCERAFLAELDG 242
E L P+P QGA+ +E +A +LV V ++H DT +V ERA LAEL+
Sbjct: 176 TETLEPVQVLPAPAQGALAVECR---SEATDLVAVLAELDHADTRAAVTAERALLAELEA 232
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
C + + A S + +G++F E+S G C A G D
Sbjct: 233 GCTAPVGAIAEVVES--------IDEEGRVFDELSLRG--CAAALDGSD 271
>gi|254821058|ref|ZP_05226059.1| porphobilinogen deaminase [Mycobacterium intracellulare ATCC 13950]
Length = 315
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 14/275 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ + H ++ ++T GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGVVRDALIALG----HPAELVTITTAGDRSSGPI--ESLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAMEEGRVDAAVHSHKDLPTADDPRFAVAAIPVRNDPRDAVVARDGLVLGELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ER LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDTRLAAVLAELDDADTRASVTAERTLLAELEAGCS 235
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + +G+IF E+S G
Sbjct: 236 APVGAIAEVVES--------IDEEGRIFEELSLRG 262
>gi|323484735|ref|ZP_08090094.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163]
gi|323401972|gb|EGA94311.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163]
Length = 297
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 139/259 (53%), Gaps = 8/259 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ ++ + ++ ++ P + ++ + T GD I +++L +IGGKGLF
Sbjct: 7 RIGSRESVLAV---IQSELIIEEIKRVCPGVSAQLVTMKTTGDMILDKSLEQIGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + + L+ L
Sbjct: 64 KELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLR--KGLESLPAGP 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+ E I
Sbjct: 122 VIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMGFEGRI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++++ PS GQG + ++ + +K ++ D+ ERAF+ LDG C
Sbjct: 182 SRYFSVDEIIPSAGQGIMAVQGRKED--YFPFMKEVDAPDSRAMALAERAFVRILDGGCS 239
Query: 246 SAIAGFAYCKGSTLYFYGI 264
S A A LY G+
Sbjct: 240 SPCAACAEAAAGRLYLRGL 258
>gi|300779915|ref|ZP_07089771.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC
33030]
gi|300534025|gb|EFK55084.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC
33030]
Length = 295
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 11/292 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LA A R +L+ H+ + ++T GD ++ E G G+FT
Sbjct: 5 LRVATRGSKLATTQAGHIRDALISAG----HSAELTIVTTAGD--MSQAPVERIGVGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
I + L GE D AVHS KD+PT + +P RED R+ I+ L DL
Sbjct: 59 TAIRQALFDGEADVAVHSFKDLPTAHEPRTHL--IIPVREDRREALIARDGLKLADLPSG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR A L R D+ + RG IE+R+ ++ + + A++LAYAG+ R+ +
Sbjct: 117 ARVGTSAPRRIAQLRAKRPDLDIHPLRGNIESRMGRVTSGELDAVVLAYAGMSRVGLGER 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ EDF P+P QGA+ +E + +A + + + ER LA L+ C
Sbjct: 177 ATEVFAPEDFMPAPAQGALAVECRAEDAQAVAAIDTLVDDFATRCALTERFVLATLEAGC 236
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A A G + G V A DG ++ R + D +G+ AQ +
Sbjct: 237 TAPVAASAVLDGDEITVRGGVFALDGSA--QLVREASGTDPREVGQACAQQL 286
>gi|163787007|ref|ZP_02181454.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1]
gi|159876895|gb|EDP70952.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1]
Length = 526
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 142/269 (52%), Gaps = 9/269 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LA+ A +S L + H V++P+ + GD + ++ L E+G G+
Sbjct: 3 KIIRIGTRDSQLAMWQAKTVQSQLEHLG----HKTVLVPVKSTGDLVLDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +++ +ID AVHS KD+PT L KG+ +A L R +I D + + A
Sbjct: 59 FTKTLDIAMLNEDIDIAVHSLKDVPTILPKGIVQAAVLKRGNINDTLVYKANEEFLS-AR 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKKE 182
+VI T SLRR+A L +++ RG + +RL KL N+ +A + A AG+ RL
Sbjct: 118 DAVIATGSLRRRAQWLNRYPTHTIVGLRGNVNSRLEKLETNEDWNAAIFAGAGLGRLGIT 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ +N+ P+P QGAI I ++ + + + IN E + ER FL L+G
Sbjct: 178 P--ENSINLHWMIPAPAQGAIMITALESDEETRAICAEINDEVSEICTTIEREFLNRLEG 235
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDG 270
C + I Y K + F G++L+ DG
Sbjct: 236 GCTAPIGAICYINKEEEVNFKGVLLSKDG 264
>gi|317179367|dbj|BAJ57155.1| porphobilinogen deaminase [Helicobacter pylori F30]
Length = 306
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E ++ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLERKFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLTGDRVKIRAVLGLPNGKEVITKEKQGDKTRAFDL 283
>gi|332666630|ref|YP_004449418.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100]
gi|332335444|gb|AEE52545.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100]
Length = 300
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 139/259 (53%), Gaps = 12/259 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LAL A TR L + +VII + + N + +I GKG
Sbjct: 3 QTIRIGTRGSKLALWQAEFTREKLREAGY--ASELVIIKTTGDNTQHLNLSFDKIEGKGF 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD--- 120
FT+EIE L+ G++D AVHS KDMPT GL ++A RED D + +SL++
Sbjct: 61 FTKEIEDALLRGDVDMAVHSMKDMPTSSPDGLVLTAVSYREDPADWLLVRK-ESLEEGQR 119
Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + ++GTSS RRKA +L R D ++ D RG + TR++KL + AI+LA AG+ R
Sbjct: 120 FQLKQNPIVGTSSARRKAQILDLRPDATLKDIRGNVPTRVDKLLQGEFDAIMLAAAGLSR 179
Query: 179 LKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
L+ + ++ + +F P+P QG + + + ++ ++ ++H D N ER
Sbjct: 180 LELDLSAVHVVKFDPREFIPAPAQGVLAYQACTEDKVIRKALQHLHHSDVSLVTNIERRI 239
Query: 237 LAELDGSCKSAIAGFAYCK 255
L ++G C+ + YC+
Sbjct: 240 LQLMEGGCQMPLG--VYCE 256
>gi|29831283|ref|NP_825917.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680]
gi|39931482|sp|Q82E76|HEM31_STRAW RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName:
Full=Hydroxymethylbilane synthase 1; Short=HMBS 1;
AltName: Full=Pre-uroporphyrinogen synthase 1
gi|29608398|dbj|BAC72452.1| putative porphobilinogen deaminase [Streptomyces avermitilis
MA-4680]
Length = 324
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 24/312 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59
M ++ R+GTR S LA+A + + ++ V P + ++ ++T GD T+R L +IG
Sbjct: 1 MSEQALRLGTRRSKLAMAQSGQVADAVRQVTGRP---VELVEITTYGD--TSREHLAQIG 55
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + +
Sbjct: 56 GTGVFVTALRDALLRGEVDFAVHSLKDLPTAQPDELALAAVPVREDPRDVLVARDGLTFE 115
Query: 120 DLALHSV-----IGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAIL 170
+L S +GT S RR A L + RS + + RG +++R+ + + + ++
Sbjct: 116 ELGAPSPKGTARVGTGSPRRMAQLNAYARSHGLAVETVPIRGNVDSRIGYVRSGELDGVV 175
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG+ R+ + + E L ++ P+PGQGA+ IE +N + ++ T +V
Sbjct: 176 LAAAGLHRIGRIDEVTEFLPVDTVLPAPGQGALAIECAADNADLIAALAELDDPFTRAAV 235
Query: 231 NCERAFLAELDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----N 281
ER+ LA L+ C + + A G + + G+V +DG ++S G
Sbjct: 236 TAERSLLAALEAGCSAPVGALADLLADGQIVTEMRLRGVVGTTDGSTLVQLSTTGPVPET 295
Query: 282 RCDAINIGRDAA 293
A+ +GR+ A
Sbjct: 296 HDQAMALGRELA 307
>gi|254778943|ref|YP_003057048.1| porphobilinogen deaminase [Helicobacter pylori B38]
gi|254000854|emb|CAX28786.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Helicobacter
pylori B38]
Length = 306
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 7/289 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECLIESE---IQIVKTKGDKILDTPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175
Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+
Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
L+G C+ I A G + ++ +GK + G++ A ++
Sbjct: 235 LNGGCQIPIGVHASLMGDGVKIQAVLGLPNGKEVITKEKRGDKTKAFDL 283
>gi|328863687|gb|EGG12786.1| hypothetical protein MELLADRAFT_114915 [Melampsora larici-populina
98AG31]
Length = 430
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 141/294 (47%), Gaps = 30/294 (10%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR S LAL A R H P H I +ST GD+ R L +GGK L+
Sbjct: 44 PIVIGTRNSRLALVQAELVRKLFEISH--PNHPTTIQSMSTAGDQNQGRPLYLMGGKSLW 101
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T+E+E L+ G +D VH KDMPT L G ++ A L RED RD + +SL +L
Sbjct: 102 TKELEVALLEGSVDLIVHCLKDMPTSLPPGCELGAILEREDPRDALVIRRDLPFRSLSEL 161
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
SVIGTSS+RR A L R + D RG + TR KL+ ++ I+LA AG+ RL
Sbjct: 162 PAGSVIGTSSVRRVAQLRRRFPQLKFQDIRGNLNTRFRKLDAPDSPYTGIVLAVAGLNRL 221
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVN------NPKA-------QELVKVINHEDT 226
+ I L+ + + GQGAI IE P+A ++LVK + H T
Sbjct: 222 ECADRISSYLSPPELYYAVGQGAIGIEIRSRAEEGEVTPRASQRTETVRQLVKSLEHWPT 281
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFA----------YCKGSTLYFYGIVLASDG 270
+ ER+ L L+G C + + + + L G+V + DG
Sbjct: 282 ALVCHAERSLLRTLEGGCSVPVGVTSTLLPLPMPCQWAPQARLTLTGVVTSVDG 335
>gi|239942156|ref|ZP_04694093.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 15998]
gi|239988619|ref|ZP_04709283.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 11379]
gi|291445603|ref|ZP_06584993.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998]
gi|291348550|gb|EFE75454.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998]
Length = 328
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 157/306 (51%), Gaps = 19/306 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGL 63
P R+GTR S LA+A + + V ++ + ++ ++T GD T+R L +IGG G+
Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEA---VREVTGRAVELVEITTYGD--TSREHLAQIGGTGV 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + + L GE+D AVHS KD+PT L ++A RED RD ++ + + L
Sbjct: 69 FVAALREALARGEVDFAVHSLKDLPTSQPDELVLAAVPQREDPRDALVARDGLTFEQLPD 128
Query: 124 HSVIGTSSLRRKALLLRW-RSD---ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ IGT S RR A L + RS I + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 129 GARIGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRL 188
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA
Sbjct: 189 GRTGEVTDFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRVAVTAERALLAA 248
Query: 240 LDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290
L+ C + + A G + L G+V ++DG ++S G + DA +GR
Sbjct: 249 LEAGCSAPVGALADVLVDGHVVNELRLRGVVGSTDGSSLVQLSTTGPVPTSHDDAAALGR 308
Query: 291 DAAQYI 296
+ A +
Sbjct: 309 ELASEM 314
>gi|331699360|ref|YP_004335599.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190]
gi|326954049|gb|AEA27746.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190]
Length = 327
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 12/253 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+A + + + D + H + ++P+ST GDR + + E+G G+F
Sbjct: 5 LRIGTRPSALAMAQSGQ----IADRLRAAGHTVELVPVSTVGDR-SGAPVAELG-VGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + SGE+D A+HS KD+PT L + A RED RD ++ + L +L S
Sbjct: 59 SAVRDAVASGEVDVAIHSYKDLPTAPDPRLTLVAVPGREDPRDALVARDGKVLGELPAGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L + V+ RG ++TR+ K+ + + +++A AG++RL +
Sbjct: 119 RVGTGSARRTAQLQALGLGLEVVPIRGNVDTRIGKVTSGELDGVIVAAAGLRRLGRIGEA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD------SVNCERAFLAE 239
E+L P+P QGA+ +E P + E + D +V ERA LA
Sbjct: 179 TELLEPVQMLPAPAQGALAVECRAGVPGSTEHGLALALTALLDDPAARAAVTAERAVLAS 238
Query: 240 LDGSCKSAIAGFA 252
L+ C + I A
Sbjct: 239 LEAGCTAPIGALA 251
>gi|308182412|ref|YP_003926539.1| porphobilinogen deaminase [Helicobacter pylori PeCan4]
gi|308064597|gb|ADO06489.1| porphobilinogen deaminase [Helicobacter pylori PeCan4]
Length = 306
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 7/289 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L + ++ T GD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECSMESEIQIV---KTTGDKILDAPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACTTKRADVRDTFLSMKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLE 175
Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E ++ L K +N E++ + ERAF+
Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLERAFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
L+G C+ I A G + ++ +GK + G++ A ++
Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDL 283
>gi|171692929|ref|XP_001911389.1| hypothetical protein [Podospora anserina S mat+]
gi|170946413|emb|CAP73214.1| unnamed protein product [Podospora anserina S mat+]
Length = 341
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 134/259 (51%), Gaps = 13/259 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+ +IGTR S LALA ++L P + ++T GDR L +G K
Sbjct: 3 EEYTVKIGTRRSALALAQTDLVIAALSKAAG-PSVKFEVHSMATMGDRDKTTPLPSLG-K 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----- 116
GL+T E+E KL++ E+D VHS KDMPT L +G + A RED RDV + Q
Sbjct: 61 GLWTSELEAKLVNKEVDVIVHSLKDMPTSLPEGCVLGAVTQREDARDVVVFPRRQGGEYK 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
+LKDL SV+GTSS+RR A L R + D RG I+TRL K + N AI+LA A
Sbjct: 121 ALKDLPEGSVVGTSSVRRAAQLKRSYKGLVFRDVRGNIDTRLAKCDDENGGYDAIILAAA 180
Query: 175 GIKRLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ RL ++ I + L + GQGA+ +E + K EL+K EDT +
Sbjct: 181 GLLRLGYDERIGQYLESSTEGGGLLHAVGQGALGLEIREGDEKIAELIKAAVDEDTMMAA 240
Query: 231 NCERAFLAELDGSCKSAIA 249
ER+ + L+G C I
Sbjct: 241 FAERSVMRTLEGGCSVPIG 259
>gi|261839094|gb|ACX98859.1| porphobilinogen deaminase [Helicobacter pylori 52]
Length = 306
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E ++ L K +N E + + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEKSAFCCHLEREFVKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A+++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKALDL 283
>gi|163848145|ref|YP_001636189.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl]
gi|222526046|ref|YP_002570517.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl]
gi|163669434|gb|ABY35800.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl]
gi|222449925|gb|ACM54191.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl]
Length = 324
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 153/296 (51%), Gaps = 18/296 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LA + +L P + + +ST GDR+ + L+ +G KGLF +E
Sbjct: 6 LGTRGSALARVQSVWVADALR--TAFPSLEVELRIISTTGDRVLDVALSAVGDKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL---H 124
+E L++ E+D VHSAKDMPT GL ++A+ R D RDV + A DLA
Sbjct: 64 LEHALLASEVDLCVHSAKDMPTATPDGLVLAAFPVRVDPRDVLVVRQAGLGTDLATLPAG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK---- 180
+ +GTSSLRR + + R D+ + D RG ++TRL KL + + A++LA AG++RL
Sbjct: 124 ARVGTSSLRRTSQVRHHRPDLQLTDVRGNVDTRLRKLASGQYDALILAAAGLRRLGLWDG 183
Query: 181 ------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
E V+ L P+ QG + IET ++ + LV+ ++ + ER
Sbjct: 184 TPGAQIGEAVVYP-LEPSVMLPAVAQGILAIETRADDEATRTLVESLDDPAARAAALAER 242
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINI 288
A L L+G C+ +A A + ++ G+V DG +F E + + + +A+ +
Sbjct: 243 ALLRRLEGGCQIPVAAHAVMTDTGMHLRGMVGTLDGSTLVFAEQTGDPAQAEALGV 298
>gi|307353670|ref|YP_003894721.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571]
gi|307156903|gb|ADN36283.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571]
Length = 292
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 18/292 (6%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LALA L D+ + +ST GD +TN L ++GG+G+F + +
Sbjct: 6 GTRASKLALAQTKRVSRMLYDLE----IETQVKKISTSGDNVTNVPLHKVGGQGIFVKAL 61
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ ++ GEID AVHS KD+P K G+ A L R+ D + + LK++ ++G
Sbjct: 62 DDAILEGEIDFAVHSMKDIPAKRPDGVVTCAILKRDSPADFLVHYC--PLKEV---KIVG 116
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSS RR+A LR D+ V + RG ++TR+ KL + AI+LA AG++RL + +
Sbjct: 117 TSSTRRRAQFLRGGLDVEVKELRGNVDTRIRKLKEGEYDAIVLAEAGMERLGLDLPGTRL 176
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
L + PSP QG I + ++P+ + + +NHE T + ERA + E+ G C +
Sbjct: 177 LP-QWHVPSPNQGIIAVVCR-DDPELIKTFEPLNHEQTRMDASVERAVMEEIGGGCYTPQ 234
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+C+ + VL+ DGK + + +G+ ++ R Q +R I
Sbjct: 235 G--VFCEDG--FLIAEVLSLDGKRWERIEDDGS---SVEEARLIGQKLRSIG 279
>gi|332673079|gb|AEE69896.1| hydroxymethylbilane synthase [Helicobacter pylori 83]
Length = 306
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA G+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEVGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E ++ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLEREFVKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A+++
Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDL 283
>gi|325846167|ref|ZP_08169236.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481646|gb|EGC84682.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 779
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 6/299 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IG+R S LAL A + + D+ + I+ +STKGDRI +R + ++ KG+F
Sbjct: 3 KIGSRASKLALIQA----NMVKDILEKEGLEAQIVEISTKGDRIRDRKIDQLNSKGVFVR 58
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D +++
Sbjct: 59 EIEEKLLDKTIDLAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDIFKKMDDLNNAL 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT S RR + ++I RG +ETR+ K+ + ++LA +G+ R + I
Sbjct: 119 VGTGSNRRVCQGKNYFTNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEIN 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ F PSP QG + IE + K E+ K + E T + ERAF EL C +
Sbjct: 179 FDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCST 238
Query: 247 AIAGFAYCKGSTLYFYG-IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ F + G + D +I +E +GN D IN+ + A+ ++ S K +
Sbjct: 239 PMGIFTEIDHDKITLTGSMAFDKDDRINYE-KVSGNISDRINLAQKLARTLKKKSYKKI 296
>gi|311111780|ref|YP_003983002.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931]
gi|310943274|gb|ADP39568.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931]
Length = 371
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 148/331 (44%), Gaps = 71/331 (21%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-------------IVIIPLSTKGDRIT 51
P+ +GTR S LAL T+S+L H + N I + T GD +T
Sbjct: 4 PYILGTRGSALAL-----TQSTLAAEHIVQMFNAHSREHGAERTLSFDITTVKTDGDVLT 58
Query: 52 NRTLTEIGGKGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIR 107
L +GG G+F + ++L+ G+ +D AVHS KD+P + GL I+A L RED R
Sbjct: 59 G-PLATLGGTGVFAAALRQRLLDGDTPDGVDVAVHSLKDLPAEPCPGLVIAAILEREDPR 117
Query: 108 DVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167
D ++ +L L + +GT S RR A + R D+ ++D RG + TR+ ++ + H
Sbjct: 118 DALVARDNLTLDTLPTGARVGTGSPRRAAQVHALRPDLEIVDIRGNVGTRIARVKGLEEH 177
Query: 168 ------------------------------AILLAYAGIKRLKKEKVIKEILNIEDFPPS 197
A++LA +G+KRL KE VI E L+ P+
Sbjct: 178 GNRQVIVRDSAETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPA 237
Query: 198 PGQGAICI---ETHVNNPKAQEL--------VKVI-------NHEDTWDSVNCERAFLAE 239
PGQGA+ I ET NP L V+ + +H +T V ER L
Sbjct: 238 PGQGALAIEVRETEFANPDTATLFNSEISQPVRTLGEALIAADHFETHLEVTAERRLLRR 297
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+ C + I +A K L +V + DG
Sbjct: 298 LEAGCAAPIGAYATVKDGDLVLTAVVASPDG 328
>gi|256810719|ref|YP_003128088.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86]
gi|256793919|gb|ACV24588.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86]
Length = 292
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 137/254 (53%), Gaps = 21/254 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + + ++ K +++ I + T GDR+ N+ L++IG G+FT
Sbjct: 2 IRIGTRGSKLALYQA----NKVAELLKNLGYDVEIKIIKTTGDRVLNKKLSDIG-IGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + D
Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNKNVDF-DENSEI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSSLRR+A L + RG ++TRL KL + AI+L+ AGI RL
Sbjct: 116 IIGTSSLRRRAFLKFLYPNARFELLRGNVDTRLKKLKDGLYDAIVLSEAGIIRLG----- 170
Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+N++DF P+P QG I + ++ + +E++K INH+ T+ +CERA L
Sbjct: 171 ---INLDDFNYKRLNILPAPAQGIIAVACKRDDEEIKEILKEINHKKTYLGSSCERAALN 227
Query: 239 ELDGSCKSAIAGFA 252
+ G C A
Sbjct: 228 QFGGGCSVPFGALA 241
>gi|300741887|ref|ZP_07071908.1| hydroxymethylbilane synthase [Rothia dentocariosa M567]
gi|300381072|gb|EFJ77634.1| hydroxymethylbilane synthase [Rothia dentocariosa M567]
Length = 371
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 71/331 (21%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-------------IVIIPLSTKGDRIT 51
P+ +GTR S LAL T+S+L H + N I + T GD +T
Sbjct: 4 PYILGTRGSALAL-----TQSTLAAEHIVQVFNAHSREHGAERTLSFDITTVKTDGDVLT 58
Query: 52 NRTLTEIGGKGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIR 107
L +GG G+F + ++L+ G+ +D AVHS KD+P + GL I+A L RED R
Sbjct: 59 G-PLATLGGTGVFAAALRQRLLDGDTPGGVDVAVHSLKDLPAEPCPGLVIAAILEREDPR 117
Query: 108 DVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167
D ++ +L L + +GT S RR A + R D+ ++D RG + TR+ ++ + H
Sbjct: 118 DALVARDNLTLDTLPTGARVGTGSPRRAAQVRALRPDLEIVDIRGNVGTRIARVKGLEEH 177
Query: 168 ------------------------------AILLAYAGIKRLKKEKVIKEILNIEDFPPS 197
A++LA +G+KRL KE VI E L+ P+
Sbjct: 178 GNRQVVVRDSTETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPA 237
Query: 198 PGQGAICIETH----VN-------NPKAQELVKVI-------NHEDTWDSVNCERAFLAE 239
PGQGA+ IE VN +P+ + V+ + +H +T V ER L
Sbjct: 238 PGQGALAIEVRETEFVNPDTATLFDPEISQPVRTLGEALIAADHFETHLEVTAERRLLRR 297
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L+ C + I +A K L +V + DG
Sbjct: 298 LEAGCAAPIGAYATVKDGDLVLTAVVASPDG 328
>gi|232245|sp|P30527|HEM3_YERIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|48614|emb|CAA47276.1| hydroxymethylbilane synthase [Yersinia intermedia]
Length = 183
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 103/179 (57%), Gaps = 2/179 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + +D RD F+S + D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDPRDAFVSPHFAHIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L S++G SSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGNSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRL 177
>gi|261402865|ref|YP_003247089.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7]
gi|261369858|gb|ACX72607.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7]
Length = 295
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 32/311 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + + ++ K + + II T GD+I N+ L+EIG G+FT
Sbjct: 2 LRIGTRGSKLALYQA----NKVAELLKNLGYEVEIIIKKTTGDKILNKKLSEIG-IGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ L++ EID AVHS KD+PT + L I A L R+ D+ I + L +L
Sbjct: 57 KELDLALMNNEIDIAVHSFKDVPTIWNENLMIGAVLERDSYYDLIIWDKNKDL-ELDKEI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR++ L ++ RG ++TRL KL + AI+L+ AGI RL
Sbjct: 116 TVGTSSIRRRSFLKAMYPNVKFKLLRGNVDTRLKKLKEGQYDAIVLSEAGIIRLN----- 170
Query: 186 KEILNIEDF-------PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+++ DF PSP QG I + ++ K +++++ INH+ T+ CER L
Sbjct: 171 ---IDLSDFNYRRLDITPSPAQGVIAVACRRDDNKIKKILERINHKKTFLECLCERTALN 227
Query: 239 ELDGSCKSAIAGFA--------YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
E G C + +T++ G + + GKI E+ + AI +G+
Sbjct: 228 EFGGGCSVPFGALSIYDEDKKILTLKATVFLNGKLKHASGKINCEID---DLDSAITLGK 284
Query: 291 DAAQYIRFISN 301
+ ++ + N
Sbjct: 285 TIGKRLKDLEN 295
>gi|282853361|ref|ZP_06262698.1| hydroxymethylbilane synthase [Propionibacterium acnes J139]
gi|282582814|gb|EFB88194.1| hydroxymethylbilane synthase [Propionibacterium acnes J139]
Length = 334
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 130/263 (49%), Gaps = 18/263 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + E + L+ + ++ + ++T GD T +L +GG G+F
Sbjct: 4 IRLGTRASTLATTQS-EMVARLLRSEGL---DVDLTTITTHGDTSTA-SLAAMGGIGVFA 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL +
Sbjct: 59 SAIRATLLKGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAILLAYAG 175
+GT S RR A LL R D++++D RG ++TRL ++ A++LA +G
Sbjct: 119 SVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWDSVNC 232
+ RL + E L+ P+P QGA+ +E + + +L K + D T +
Sbjct: 179 LARLGHSGTVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATA 238
Query: 233 ERAFLAELDGSCKSAIAGFAYCK 255
ERA L+ L+ C + I A K
Sbjct: 239 ERAVLSHLEAGCAAPIGALAQLK 261
>gi|239980250|ref|ZP_04702774.1| porphobilinogen deaminase [Streptomyces albus J1074]
Length = 307
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 18/266 (6%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88
VH++ + ++ ++T GD T+R L +IGG G+F + + L+ GE+D AVHS KD+P
Sbjct: 11 VHQLTGRPVELVEITTYGD--TSREHLAQIGGTGVFVAALREALVRGEVDFAVHSLKDLP 68
Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW----RSD 144
T L ++A PRED RDV I+ ++L + +GT S RR A L + R
Sbjct: 69 TAQPDELVLAAVPPREDPRDVLIARDGLRFEELPEGARVGTGSPRRMAQLNAYARGHRMA 128
Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204
+ + RG I+TR+ + + + A++LA AG+ R+ + + E L+++ P+PGQGA+
Sbjct: 129 VETVPIRGNIDTRIGFVRSGELDAVVLAAAGLHRVGRSDEVTEYLSVDTILPAPGQGALA 188
Query: 205 IETHVNN-----PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA--YCKGS 257
IE + P A L + ++ T +V ER+ LA L+ C + + A G
Sbjct: 189 IECAAGHEADGLPLAAVLAE-LDDPATRAAVTAERSLLAALEAGCSAPVGALADLLADGQ 247
Query: 258 T---LYFYGIVLASDGKIFHEVSRNG 280
+ G+V + DG ++S G
Sbjct: 248 VVKEMRLRGVVGSPDGSALVQLSTTG 273
>gi|115399989|ref|XP_001215583.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
gi|114191249|gb|EAU32949.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
Length = 337
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 156/321 (48%), Gaps = 19/321 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R SL V P + I+ L T GDR L G K
Sbjct: 9 QPPLRIGTRRSNLAMVQAEGIRDSLQKVA--PDRSYEIVALRTLGDRDKQTALYNFGAKN 66
Query: 63 LFTEEIEKKLISGEIDCAVH------SAKDMPTKLLKGLQISAYLPREDIRDVFI---SH 113
L+T E+E+KL SGE+D VH +A DMPT L Q++A PR+D RD I S
Sbjct: 67 LWTTELEEKLTSGELDVIVHCLKDQLTAPDMPTTLPDTCQLAAIPPRDDPRDALIVKASL 126
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILL 171
SL+ L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ +++
Sbjct: 127 PYTSLQSLPAGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIM 186
Query: 172 AYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+ AG++R+ + I + L D + GQGA+ +E + + EL+ + + +
Sbjct: 187 SAAGLERVGLQYRINQYLGSRDGGILHAVGQGALGLEIRKGDAQMLELLGQLADRKSTLA 246
Query: 230 VNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDA 285
ER+ + L+G C I + L + IV++ DG E S+ G +A
Sbjct: 247 CLAERSLMKTLEGGCSVPIGVETEWLSSGDLRMHSIVVSLDGTQCVEDSITSKVGTDDEA 306
Query: 286 INIGRDAAQYIRFISNKNVFN 306
G + A + + N
Sbjct: 307 AAFGEELAARLVKAGAGQILN 327
>gi|311895212|dbj|BAJ27620.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 304
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 116/244 (47%), Gaps = 5/244 (2%)
Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
R ++E GG F L+ E+D VHS KD+PT GL + PR D+RD
Sbjct: 52 RAVSERGGGSAFAGRQAAALLDREVDVVVHSLKDLPTADPDGLLLLPSPPRADVRDALCG 111
Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172
L L + +GTS+ RR A LL R D++ RG + TRL +L A++LA
Sbjct: 112 ---APLAGLPTGARVGTSAARRIAQLLYVRPDLAPERIRGNVPTRLTRLRT--LDAVVLA 166
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ RL ++ I E+L + FPPSPGQGA+ I+ ++ A+EL+ T V
Sbjct: 167 AAGLHRLGRDGEIAELLPLAQFPPSPGQGALGIQVRADDAMARELLAGTGDPVTDAEVRA 226
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
ERA LAEL G C + A L +G V G E +G +GR
Sbjct: 227 ERAMLAELHGGCSVPVGAHATTADGILTLHGQVTTPRGTRQIEARLSGTSAAPEKLGRAV 286
Query: 293 AQYI 296
A +
Sbjct: 287 AGLL 290
>gi|225569053|ref|ZP_03778078.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM
15053]
gi|225161852|gb|EEG74471.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM
15053]
Length = 298
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 148/302 (49%), Gaps = 27/302 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ A + ++ P I+ + T+GD+I +R L GGKGLF
Sbjct: 5 IRIGSRESRLAVKQAEIVKQAVE--RNCPDIKAEIVTMKTEGDKILDRRLELAGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+EK L+ G ID VHS KD+P ++ + L + A+ RED RDV I ++ +
Sbjct: 63 KELEKALLDGRIDICVHSLKDVPMEVPEDLPVVAFGEREDPRDVLIYKPGRT--SIPEGG 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR+ L R + RG ++TRL KL+ +LA AG+KRL E+V
Sbjct: 121 VIGTSSRRRELQLKRLYPSCTFRSIRGNVQTRLRKLSEEGFDGTVLAAAGLKRLHMEEVA 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW-DSVNCERA--------- 235
+ ++++ P+ GQG + ++ + +W S C ++
Sbjct: 181 GRVFSVDEIIPAVGQGILAVQGRK------------GRDYSWLTSFACGKSRAEAEAERE 228
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
F A L G C S +A A +G+ L G+ G I+ +R G A +G A+
Sbjct: 229 FAAALGGGCTSPVAAHAQAQGAELKLTGLYYCG-GDIYRTRTRTGETDRARQLGAALAEE 287
Query: 296 IR 297
+R
Sbjct: 288 MR 289
>gi|196232296|ref|ZP_03131150.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428]
gi|196223664|gb|EDY18180.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428]
Length = 307
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 134/252 (53%), Gaps = 18/252 (7%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIGGKGLF 64
+GTR S LA+A T +L P I T+GD+ + +L E GGKGLF
Sbjct: 6 LGTRASALAVAQVELTTKAL--AAAFPAMQIERREFVTRGDKKLDLSLLRANEAGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E L++G ID AVHS KD+P GL I+A L R DV I+ Q+L DL
Sbjct: 64 TKELEDALLNGSIDVAVHSLKDLPGHNPPGLDITAVLERAPTADVLITKQPQTLLDLPQG 123
Query: 125 SVIGTSSLRRKALLLRW-RSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLKKE 182
++GTSS+RR A L+W R D+ V ++RG ++TRL KL + I+LA AG++RL +
Sbjct: 124 VLLGTSSVRR-ARQLQWRRPDVRVEEWRGNVQTRLRKLAERDDVTGIILAQAGLERLGHD 182
Query: 183 KVIKEILN----------IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
+ ED P+ GQGAI +++ + + +++ I+H +T ++
Sbjct: 183 LSAGRLETEHGKFYVTSLAEDLLPAIGQGAIALQSRADRAEVAAVLQKIDHRETHLAIRA 242
Query: 233 ERAFLAELDGSC 244
ER L G C
Sbjct: 243 ERELQRLLAGDC 254
>gi|242827493|ref|XP_002488841.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC
10500]
gi|218712002|gb|EED11431.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC
10500]
Length = 413
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 160/342 (46%), Gaps = 42/342 (12%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLST---KGDRITNRTLTEIG- 59
K R+G+R S +AL ++L H H P+ST +GDR ++
Sbjct: 72 KAVRVGSRNSKMALIQTSSVAAALYKAH----HGFFTFPVSTHSVQGDRDKTSAFRDLAK 127
Query: 60 -----------GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108
K L+T EIE +L++G+ID VHS KD+PT L G +I A+ R D D
Sbjct: 128 AHGNKQTAADTAKSLWTLEIEARLLAGDIDLIVHSLKDVPTTLPDGCEIGAFPHRNDPTD 187
Query: 109 VFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK 165
+ +SL++L SV+GT S+RR A L + + + + RG ++TR+ KL+ N
Sbjct: 188 ALLVKAGLPYKSLEELPAGSVVGTCSVRRTAQLRHYCPHLIIQECRGNVDTRVAKLDAND 247
Query: 166 A--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ AI++A AGI RL E I + L+ + + GQGA+ IE + KA+ELV I+H
Sbjct: 248 SPYTAIVVAAAGIVRLNLEHRITQRLSGPAYTYAVGQGALGIEIRKEDQKARELVACIDH 307
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAY-----CKG----------STLYFYGIVLAS 268
T ERA L L G C + I + KG TLY G +L
Sbjct: 308 WPTRVRCLAERALLRFLQGGCSAPIGVHSAFVRTPAKGEPNVNDNHYEGTLYLTGTLLHP 367
Query: 269 DGKI---FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
DG + HE + D+ IG+ + I + + +
Sbjct: 368 DGGMEIRAHEKGQVKCTADSETIGKSVGKKILDLGGAQILDI 409
>gi|291295782|ref|YP_003507180.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
gi|290470741|gb|ADD28160.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
Length = 300
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 145/267 (54%), Gaps = 15/267 (5%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RI TR S LAL A + L + + ++ + T+GDR +R ++ G+G FT+
Sbjct: 5 RIATRGSRLALWQAGWVQQQLERLGA----QVELVVVETQGDR-ESRPFAQMQGQGFFTK 59
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLAL 123
++ +++ E D AVHS KD+P+ +GL+I+A RED R++ + ++ L L
Sbjct: 60 AVQDAVLNWEADLAVHSFKDLPSARPEGLEIAAVPKREDPRELLLVRPEALDEAAPGLPL 119
Query: 124 HS--VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S + GTS+ RR+A L + R D+ + + RG + TR++KL + AILLAYAG+KRL+
Sbjct: 120 RSGALAGTSAARRQAQLRQLRPDLGLKELRGNVPTRVDKLRCGEYDAILLAYAGLKRLEL 179
Query: 182 E--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + ++L P+P QGA+ +E ++ + + L++ ++ +V ER + +
Sbjct: 180 DLSGLYTQVLPTTVLVPAPAQGALALECRSDDHRLKALLQPLDDPQARRTVEAERGLMQK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLY---FYG 263
L G C+ A+ A L +YG
Sbjct: 240 LAGGCQLALGALAQAGPQGLMLLAWYG 266
>gi|300782413|ref|YP_003762704.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32]
gi|299791927|gb|ADJ42302.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32]
Length = 309
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 148/298 (49%), Gaps = 25/298 (8%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGLFT 65
+GTR S LAL ++ D + + I+ ++T GD+ +L I G G+FT
Sbjct: 1 MGTRGSKLALTQT----GTVADALRATGVEVEIVKVTTPGDK----SLAPIATIGVGVFT 52
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L+ E+D VHS KD+PT G+ ++A PRED RD I+ +L +L S
Sbjct: 53 SALREALLRNEVDVIVHSYKDLPTAPEPGITLAAVPPREDPRDALIARDGLTLGELPPGS 112
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + I
Sbjct: 113 TVGTGAARRTAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGLVEAI 172
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSC 244
E L+ P+P QGA+ +E + + L++ ++ E T +V ERA LA L+ C
Sbjct: 173 TETLDPIQMLPAPAQGALAVECRSADVDLEHLLRSTLDDEGTRAAVTAERALLAALEAGC 232
Query: 245 KSAIAGFAYCKGSTLYFYGIV--LASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ + A IV L ++GK+ +S G AI A +R I+
Sbjct: 233 SAPVGALAE----------IVEDLDAEGKVVERISLRGTA--AIEGEEGAVDMVRAIA 278
>gi|207092595|ref|ZP_03240382.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_AG0C1]
Length = 306
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 148/282 (52%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEKSAFCCRLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDL 283
>gi|302349001|ref|YP_003816639.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15]
gi|302329413|gb|ADL19608.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15]
Length = 298
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 140/259 (54%), Gaps = 6/259 (2%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD + +R L IG KG+F +E+ + +++GE D AVHS KD+P++L + L+I+ P
Sbjct: 40 VKTRGDVMQDRPLFSIGVKGVFEKEVNRAVLNGEADVAVHSMKDLPSQLEEDLEIAMVPP 99
Query: 103 REDIRDVFI----SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
RE D + S ++D+ +GTSS+RR A L + ++ RG ++TR+
Sbjct: 100 REVPNDSLVIGAGSPEVTGVEDVPSGLSVGTSSVRRIAFLRHYNRNVITKVVRGNVDTRI 159
Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218
KLN + + +L+A AG++RL + + +L ++ FPP PGQG I + ++P +L+
Sbjct: 160 AKLNRGEVNYLLMAEAGLRRLNIPQK-RVMLPLDKFPPEPGQGIIAVVAPSSSP-LFDLL 217
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
+ + E T+ ER F+ + C + I + +G L + DG++ +
Sbjct: 218 RRASDEVTYAMAMAERKFVELIGAGCHTPIGAVSILEGGRLAMIAAAASPDGEVMNFARA 277
Query: 279 NGNRCDAINIGRDAAQYIR 297
+G+ + I R+ + ++
Sbjct: 278 SGSLGEPERIARELVENLK 296
>gi|66809519|ref|XP_638482.1| porphobilinogen deaminase [Dictyostelium discoideum AX4]
gi|74854142|sp|Q54P93|HEM3_DICDI RecName: Full=Porphobilinogen deaminase; AltName: Full=Heme
biosynthesis protein C; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS
gi|60467077|gb|EAL65118.1| porphobilinogen deaminase [Dictyostelium discoideum AX4]
Length = 325
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 14/311 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LA+ R + +++ P + I + T GD++ + +L++IG KGLFT+E
Sbjct: 12 IGSRKSQLAMLQTEWVRDRIQELN--PGIIVEIKTMDTTGDKVLDVSLSKIGDKGLFTKE 69
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-----SLKDLA 122
+E +++G ID AVHS KD+PTKL GL++ A R + D FI++ + L +L
Sbjct: 70 LEDMMLNGTIDLAVHSLKDIPTKLPDGLKLGAITKRYNTSDAFIANAKKHGKNCKLSELP 129
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLK 180
++IG+SSLRR A L + + D RG + TR KL ++N ++LA AG++R++
Sbjct: 130 QGAMIGSSSLRRVAQLKKAYPHLQFKDIRGNLNTRFKKLEDDSNGYDGMILAVAGLERME 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I EI+ + GQG++ IE + Q ++ + H ++ ER+ L +L
Sbjct: 190 LTDHISEIIPDSISLYAVGQGSLGIECKDGDDFIQSILNPLIHRESMYCCEAERSMLRDL 249
Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+G C I TL IVL DG + E G +G+ AQ
Sbjct: 250 EGGCHVPIGVVTKLHNQSQPDETLEINAIVLNLDGSKYIESKIIGPSIQYYQLGKSIAQD 309
Query: 296 IRFISNKNVFN 306
+ +K++ +
Sbjct: 310 LINKGSKDILS 320
>gi|260941880|ref|XP_002615106.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720]
gi|238851529|gb|EEQ40993.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720]
Length = 356
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 158/315 (50%), Gaps = 17/315 (5%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IG R S LA+ + ++ + P + I+ L+T GD++ N+ L GGK L+T+
Sbjct: 17 QIGGRKSRLAVVQSEFVKAGIE--ANFPELSCSILALNTLGDKVQNKPLYSFGGKSLWTK 74
Query: 67 EIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
E+E L+ ++D VHS KDMPT L ++ + RED RD + +SL
Sbjct: 75 ELEILLLEAVGDYPQLDMIVHSLKDMPTNLPDEFELGCIVEREDPRDALVVKKGLPFRSL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176
DL +V+GTSS+RR A LL+ + D RG I TRL+KL++ + ++LA +G+
Sbjct: 135 SDLPPGAVVGTSSIRRSAQLLKNYPHLRFEDMRGNIATRLSKLDDPSSPFTCLILAASGL 194
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL I L+ D + GQGA+ IE ++ +++ + H + ERA
Sbjct: 195 LRLGLGDRISAPLDAPDMYYAVGQGALGIEIRKDDTVMLSVLRKLEHLPSAYCCYAERAM 254
Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291
+ L+G C + + T LYF GI+++ DGK E N+ +A +G +
Sbjct: 255 MRMLEGGCSVPLGVKTHYNEQTQQLYFKGIIVSPDGKQSVEAEHTSIIYNKAEAEAVGEE 314
Query: 292 AAQYIRFISNKNVFN 306
A+ + + K + +
Sbjct: 315 VARKLTHLGGKKILD 329
>gi|121711982|ref|XP_001273606.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL
1]
gi|119401758|gb|EAW12180.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL
1]
Length = 333
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 153/305 (50%), Gaps = 15/305 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R +L + P + I+ L T GDR + L G K L+
Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDNLQKLS--PDRSFEIVTLHTLGDRDKSTALYSFGAKNLW 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121
T E+E+KL SGE+D VH KDMPT L ++A PR+D RD I ++ +L+ L
Sbjct: 69 TAELEEKLNSGELDVVVHCLKDMPTTLPDTCDLAAIPPRDDPRDALIIKSSLPYTTLQSL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179
+++GTSS+RR A L R + + RG +ETRL K+++ ++++ AG++RL
Sbjct: 129 PAGAIVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDGEYTCMVMSAAGLERL 188
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + L D + GQGA+ +E + EL+ + E + + ERA +
Sbjct: 189 GLQHRISQYLGSRDGGILHAVGQGALGLEIRKGDSATLELLDRLGDEGSTLACLAERALM 248
Query: 238 AELDGSCKSAIA---GFAYCKGSTLYFYGIVLASDG--KIFHEVS-RNGNRCDAINIGRD 291
L+G C I + L IV++ DG + V R ++ +AI +G +
Sbjct: 249 RALEGGCSVPIGVETEWVDWAARLLAMRAIVVSLDGTRSVLDSVEVRVQSKEEAIALGEE 308
Query: 292 AAQYI 296
A +
Sbjct: 309 LAARL 313
>gi|315044601|ref|XP_003171676.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311344019|gb|EFR03222.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 335
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 151/293 (51%), Gaps = 18/293 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R++L + + P + GD L E+ K
Sbjct: 6 RKTFTIGTRKSNLAVLQTEIVRNAL--IARWPDCQFNVHTRDAAGDLNKVTPLRELTSKN 63
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ E+D VHS KD+PT++ + ++ A++ RED RD + Q +L
Sbjct: 64 LWTEELEEMLLAKELDLVVHSLKDVPTQIPEACKLGAFMKREDPRDALVVKKGQPKTTLA 123
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SV+GTSS+RR A + R + VID RG I+TRL KL+ I+LA AG+
Sbjct: 124 ELPAGSVVGTSSVRRTAQIGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 183
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R E I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 184 RTGYEDRISQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 243
Query: 236 FLAELDGSCKSAI---------AGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
L L+G C + + A A KG L IV + DG+ EV ++
Sbjct: 244 LLRTLEGGCSAPLGVETEWVPDASDASGKGELLRLRCIVTSVDGREAVEVEKD 296
>gi|229822489|ref|YP_002884015.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333]
gi|229568402|gb|ACQ82253.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333]
Length = 334
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 7/264 (2%)
Query: 4 KPFRIGTRCSPLALAH---AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ R+GTR S LA A E ++ + + ++ ++T GD +T +L +GG
Sbjct: 20 RTLRVGTRASALATTQSEWAGEAIAARVAAATGSDVEVELVRVTTTGDVLTG-SLASMGG 78
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ G D AVHS KD+PT GL + A RED RDV + L D
Sbjct: 79 TGVFVTALREALLDGRCDVAVHSLKDLPTAAAPGLVLGAVPQREDPRDVLCARAGAGLAD 138
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178
L +GT S RR A L R R D+ ++D RG ++TRL++++ K A++LA AG+ R
Sbjct: 139 LPAGGRVGTGSPRRAAQLRRARPDLEIVDIRGNVDTRLSRISPGKGDLDAVVLARAGLAR 198
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFL 237
L + + E L+ P+PGQGA+ +E P ++ + T +V ERA L
Sbjct: 199 LGRLDAVTEALDAGVMVPAPGQGALAVEAVDAAPDWLLAGLRAFDDAPTRLAVTAERAML 258
Query: 238 AELDGSCKSAIAGFAYCKGSTLYF 261
A L+ C + + A GS L
Sbjct: 259 ARLEVGCSAPVGALATLAGSQLLL 282
>gi|116754430|ref|YP_843548.1| porphobilinogen deaminase [Methanosaeta thermophila PT]
gi|116665881|gb|ABK14908.1| hydroxymethylbilane synthase [Methanosaeta thermophila PT]
Length = 270
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE 104
T GD +R L I G+GLF EI+++++SGEID AVHS KD+P+K + L+I+A + R+
Sbjct: 5 TSGDLFLDRPLHMISGQGLFVREIDERMLSGEIDLAVHSMKDLPSKRPERLRIAAIMKRD 64
Query: 105 DIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164
D+ ++ L DL +VIGTSS+RR A L R R D+ V RG ++TRL KL+
Sbjct: 65 SPCDILLTKDGSGLDDLKSGAVIGTSSMRRAAQLRRARPDLVVRSLRGNLQTRLRKLHAG 124
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
+ I++A AG++R+ K +L+ F PSP QG I + V + L +I+H
Sbjct: 125 EYDGIVIAEAGVQRMGYHLGYK-VLDPGFFVPSPNQGTIAV-VSVAGTEGDALASLIDHR 182
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ + ER + + G C +A FA G ++ +L+ DG+ F
Sbjct: 183 PSREETMVERRIMEVVGGGCLVPMAVFARHLGDRIHVTAEILSKDGERF 231
>gi|160879927|ref|YP_001558895.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
gi|160428593|gb|ABX42156.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
Length = 301
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 147/270 (54%), Gaps = 12/270 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59
M+K+ +G+R S LA+ +T + ++++ P + ++ L T GD I +++L +IG
Sbjct: 1 MKKQKIVVGSRDSKLAV---MQTELIMHEINRNNPEIELELVTLKTTGDLILDQSLDKIG 57
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL- 118
GKGLF +E++ L+ G ID AVHS KDMP + K L I A R D RDV +
Sbjct: 58 GKGLFVKELDLALLDGRIDIAVHSLKDMPMEENKELPIVALPKRGDARDVLVLPKGCEFI 117
Query: 119 --KDLAL-HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+D+ L + IG+SS RRK + + RG + TRL+KL+ + +++LA AG
Sbjct: 118 EYEDMNLYYQNIGSSSARRKLQIQKLLPSAGTSGVRGNVITRLDKLDRGEYTSLILAAAG 177
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCER 234
++R+ I ++E+ P+ GQG + I+ + N E +K N T+ S+ ER
Sbjct: 178 LQRVGLPHRISHYFSVEEMIPAAGQGILSIQARRDLNVDFLENIKDAN--TTYASL-AER 234
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264
+F+ LDG C S IA +A +G L G+
Sbjct: 235 SFVRTLDGGCSSPIAAYAAVEGEELKLVGL 264
>gi|326802537|ref|YP_004320356.1| porphobilinogen deaminase [Sphingobacterium sp. 21]
gi|326553301|gb|ADZ81686.1| Porphobilinogen deaminase [Sphingobacterium sp. 21]
Length = 546
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 13/273 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A + L + ++ T+GD I + L ++ GKG FT+E
Sbjct: 7 IGTRGSDLALWQANHVKDRLATIGVQAELKVI----KTQGDNIQHLRLDKLEGKGFFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLAL-- 123
+E++L++ +ID AVHS KD+PT GL+I+A RED ++ I K L++
Sbjct: 63 LEEELLAEKIDIAVHSHKDLPTANPPGLRIAAVSEREDPSELLIILKDCVDLKKRLSVKH 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
++++GTSS RRKA LL +R D+ + D RG + TRL KL + K AI+LA AG++RLK +
Sbjct: 123 NAIVGTSSNRRKAQLLAFRPDLEIEDLRGNVNTRLQKLRDEKYDAIMLAKAGVERLKLDL 182
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ EI+ + P+P QG + I+ ++ E+++ ++ +D +++ ER L +
Sbjct: 183 SEFHVEIIPPTEIIPAPAQGVLAIQIRESDHTLYEVLQKLHQKDVAETIGVERKVLNLFE 242
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIF 273
G C + YC K +T Y A DG+ F
Sbjct: 243 GGCHMPLG--CYCRKTTTGYEVWTAKAKDGESF 273
>gi|126178933|ref|YP_001046898.1| porphobilinogen deaminase [Methanoculleus marisnigri JR1]
gi|125861727|gb|ABN56916.1| hydroxymethylbilane synthase [Methanoculleus marisnigri JR1]
Length = 294
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA + L D I ++ ++T+GD T L IGG+G+F
Sbjct: 3 LRIGTRGSALALAQTNKVVGMLAD-RGIEAE---VVTIATEGDTATGVPLHAIGGQGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++ ++ GEID AVHS KD+P GL A L R+ D F+ H L S
Sbjct: 59 RALDDAILRGEIDAAVHSMKDIPAARPAGLVCCAVLERDSPAD-FLVHECP----LDAVS 113
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIG+SS RR A LLR + V RG ++TRL KL + AI+LA AG++RL +
Sbjct: 114 VIGSSSTRRCAQLLRDAPALEVKQLRGNVDTRLRKLREGQYDAIVLAEAGLQRLGL-TLP 172
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L + F PSP QG I + ++P ++H T V ERA + E+ G C
Sbjct: 173 GEPLPTDRFVPSPNQGTIAVVCR-DDPAVAGAFAALDHAPTRLDVEIERAVMEEVGGGCF 231
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
+ YC+ L VLA DG + + R+
Sbjct: 232 TPQG--IYCRNGNLIAE--VLALDGSRWERIERH 261
>gi|255953953|ref|XP_002567729.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589440|emb|CAP95584.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 339
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 149/282 (52%), Gaps = 16/282 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K IGTR S LAL +T L + K P + I T GD T L + K
Sbjct: 8 QKTITIGTRKSKLAL---LQTNLVLDALKKAFPQYEYKIFSKETAGDLNTTIALRDFNTK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
L+TEE+E+ +I G++D VHS KD+PT L ++ +PRED RDV + +SL
Sbjct: 65 NLWTEELEELMIDGQVDIIVHSLKDVPTTLPSSCKLGPSMPREDSRDVLVVKQGLPYKSL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
++ SV+GTSS+RR A L R + V D RG I TRL+KL+ ++ I+LA AG+
Sbjct: 125 SEIPAGSVVGTSSIRRTAQLARKYPHLKVQDVRGNIGTRLSKLDAEDSPYACIILAAAGL 184
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL I + L+ ++ + GQGA+ IE + +++ I H+DT SV ER
Sbjct: 185 LRLDLADRITQYLDSKNSGMLYAVGQGALGIEIRKEDTVLHDMLDKIGHQDTTFSVLAER 244
Query: 235 AFLAELDGSCKSAIA---GFAY-CKGS-TLYFYGIVLASDGK 271
+ L L+G C + + G+ +G+ L +V++ DGK
Sbjct: 245 SLLRTLEGGCSAPLGVETGWVQNAQGAKQLRMRSVVVSVDGK 286
>gi|19551663|ref|NP_599665.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|62389318|ref|YP_224720.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|25453022|sp|Q8NT90|HEM3_CORGL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21323183|dbj|BAB97811.1| Porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|41324652|emb|CAF19134.1| PORPHOBILINOGEN DEAMINASE [Corynebacterium glutamicum ATCC 13032]
Length = 302
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 12/295 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA A R L + +IV P GD N + E G G+FT
Sbjct: 3 LKIGTRGSKLATTQAGTIRDQLKHYGRDAELHIVTTP----GD--VNMSPVERIGVGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + L SGE D AVHS KD+PT + +P R D R+ I+ +L +L
Sbjct: 57 QALRDVLHSGECDVAVHSMKDLPTATDPRFHL--VVPTRADSREALIARDGLTLAELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C
Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A A G T+ V A DG S G+ +G AQ +
Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQL 289
>gi|32490989|ref|NP_871243.1| hypothetical protein WGLp240 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166195|dbj|BAC24386.1| hemC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 291
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 133/242 (54%), Gaps = 1/242 (0%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89
+H P NI ++P+ T GD I KGLF +E+EK L+ + D AVHS KD +
Sbjct: 11 LHYHPKLNIKLVPILTTGDLINKIRNNITNEKGLFIKELEKSLLKYQSDIAVHSMKDFSS 70
Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
L L ++A R+D RD +S+ ++ L ++ +GTSSLRRK LL R D+ +
Sbjct: 71 SFLDSLGLAAICKRDDPRDAIVSNYYNNIISLPNNAKVGTSSLRRKCQLLSIRPDLKIFP 130
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
+G I +RL KLN A++LA A +KRLK + + ++ P+ GQG+I I+ +
Sbjct: 131 CKGNIHSRLKKLNQGVFDALILATAALKRLKINEQMYTPIDPSYLLPAMGQGSIAIQCRL 190
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLAS 268
+ K ++V+ IN++ T +N E+ ++ L C+ I +A + +T++ +V +
Sbjct: 191 YDNKIIDIVRNINNKKTALCINSEKIVVSMLGTGCRVPIGSYAKIENKNTIWIRALVGSI 250
Query: 269 DG 270
DG
Sbjct: 251 DG 252
>gi|467039|gb|AAA17223.1| hem3b [Mycobacterium leprae]
Length = 315
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 16/276 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLM-DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R +L+ + H P +VI+ +T GD+ ++ ++ +G G+F
Sbjct: 2 IRIGTRGSLLATTQAALVRDALIANGH---PAELVIV--NTAGDQ-SSASIDSLG-VGVF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + + G +D AVHS KD+PT ++A PR D RD ++ L +L
Sbjct: 55 TTALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ R +
Sbjct: 115 SLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARPGRLDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 175 VTETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+ + A S + +G++F E+S G
Sbjct: 235 SAPVGAIAQVVES--------IDGEGRVFEELSLRG 262
>gi|255324252|ref|ZP_05365374.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum
SK141]
gi|311740973|ref|ZP_07714798.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298768|gb|EET78063.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum
SK141]
gi|311303775|gb|EFQ79853.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 295
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 143/285 (50%), Gaps = 10/285 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA A R L+D +IV +T GD N E G G+FT
Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDAGFDSQLHIV----TTAGD--VNMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + + L +GE D AVHS KD+PT + ++ +P R+D R+ ++ SL L
Sbjct: 56 QALREALYAGECDIAVHSFKDLPTAPDERFRL--VVPQRQDSREALVARDGLSLAQLPQG 113
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ + RG I+TR++K+ + + A+LLAYAG+ R
Sbjct: 114 ARVGTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVLLAYAGLLRGGYADR 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
EI F P+P QGA+ IE A L +++ + + ERA LA L+ C
Sbjct: 174 ATEIFEPSVFMPAPAQGALAIEAVAGTEAAAALDAIVDDRASAAAAG-ERAVLARLEAGC 232
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ +A + G L G V A DG + +G+ +A ++G
Sbjct: 233 TAPVAATSRWDGDQLTVRGGVFALDGSRQLTATASGSAAEAADLG 277
>gi|260588741|ref|ZP_05854654.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583]
gi|260540923|gb|EEX21492.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583]
Length = 296
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 136/257 (52%), Gaps = 6/257 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LA+ + R + + + + I+ + T GD+I +RTL +IGGKGLF +E
Sbjct: 6 IGSRESKLAVVQSEMVRDYIRENN--ADIQVEILTMKTTGDKILDRTLDKIGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + + L I
Sbjct: 64 LDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLV--LPKGVTQLDTSKPI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
G SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E I
Sbjct: 122 GCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLEDRIAR 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
E+ P+ GQG + I+ + + +K E+ + ERAF+ L+G C S
Sbjct: 182 YFEPEEMIPAAGQGILAIQGRKDVDYS--YLKGYGDENATYAALAERAFVRYLNGGCSSP 239
Query: 248 IAGFAYCKGSTLYFYGI 264
+A A + + G+
Sbjct: 240 VAAHARVEDGQIILRGL 256
>gi|289193013|ref|YP_003458954.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22]
gi|288939463|gb|ADC70218.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22]
Length = 292
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 135/252 (53%), Gaps = 21/252 (8%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A + + ++ K +++ I + T GDR+ ++ L++IG G+FT+E
Sbjct: 4 IGTRGSKLALYQA----NKVAELLKNLGYDVKIKIIKTTGDRVLDKKLSDIG-IGVFTKE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ +++ EID AVHS KD+PT + L + A L R+ D+ I + D VI
Sbjct: 59 LDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNKDVDF-DENSKIVI 117
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L + RG ++TRL KL N AI+L+ AGI RL
Sbjct: 118 GTSSLRRRAFLKFLYPNAKFELLRGNVDTRLRKLKENLYDAIVLSEAGIIRLG------- 170
Query: 188 ILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+N++DF P+P QG I + ++ + ++++K INHE T+ CERA L E
Sbjct: 171 -INLDDFNYKRLNILPAPAQGIIAVACKRDDEEMKDILKEINHEKTYLESLCERAALNEF 229
Query: 241 DGSCKSAIAGFA 252
G C A
Sbjct: 230 GGGCSVPFGALA 241
>gi|331084091|ref|ZP_08333198.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330402453|gb|EGG82023.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 296
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 136/257 (52%), Gaps = 6/257 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LA+ + R + + + + I+ + T GD+I +RTL +IGGKGLF +E
Sbjct: 6 IGSRESKLAVVQSEMVRDYIRENN--ADIQVEILTMKTTGDKILDRTLDKIGGKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + + L I
Sbjct: 64 LDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLV--LPKGVTQLDTSKPI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
G SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E I
Sbjct: 122 GCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLEDRIAR 181
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
E+ P+ GQG + I+ + + +K E+ + ERAF+ L+G C S
Sbjct: 182 YFEPEEMIPAAGQGILAIQGRKDVDYS--YLKGYGDENATYAALAERAFVRYLNGGCSSP 239
Query: 248 IAGFAYCKGSTLYFYGI 264
+A A + + G+
Sbjct: 240 VAAHARVEDGQIILRGL 256
>gi|328883227|emb|CCA56466.1| Porphobilinogen deaminase [Streptomyces venezuelae ATCC 10712]
Length = 328
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 158/319 (49%), Gaps = 28/319 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59
M ++ R+GTR S LA+A + + V ++ + ++ ++T GD T+R L +IG
Sbjct: 1 MTERALRLGTRRSKLAMAQSGHVADA---VRRLTGRPVELVEITTYGD--TSREHLAQIG 55
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + L++ E+D AVHS KD+PT L ++A RED RDV I+ +L
Sbjct: 56 GTGVFVAALRDALLADEVDFAVHSLKDLPTAQHPDLVLAAIPEREDPRDVLIARDGLTLD 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L + +GT S RR A L + DI+ + RG ++TR+ + + A++LA AG
Sbjct: 116 RLPEGARVGTGSPRRMAQLHAYARNHGLDITCVPIRGNVDTRVGYVRKGELDAVVLAAAG 175
Query: 176 IKRLKKEKVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
+ R+ + L+ E P P+PGQGA+ +E +N + + ++ T +V
Sbjct: 176 LNRIGGTDELLGGLSAEPLPVDTVLPAPGQGALAVECLASNTELVAALAPLDDPLTRAAV 235
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNG- 280
ER+ LA L+ C + + A + + G+V +DG ++S G
Sbjct: 236 TAERSLLAALEAGCSAPVGALADLLADDPGHGQVVTEMRLRGVVGTTDGSTLVQLSTTGP 295
Query: 281 ---NRCDAINIGRDAAQYI 296
+ +A+ +GR+ A +
Sbjct: 296 VPTSHDEAMALGRELADEM 314
>gi|114640812|ref|XP_001149046.1| PREDICTED: porphobilinogen deaminase [Pan troglodytes]
Length = 276
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 129/241 (53%), Gaps = 6/241 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVTTLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L
Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLV 258
Query: 242 G 242
G
Sbjct: 259 G 259
>gi|86739201|ref|YP_479601.1| porphobilinogen deaminase [Frankia sp. CcI3]
gi|86566063|gb|ABD09872.1| hydroxymethylbilane synthase [Frankia sp. CcI3]
Length = 395
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 123/252 (48%), Gaps = 40/252 (15%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
++P+ T GDR + +++IGG G+F + L+SGEID AVHS KD+PT GL ++A
Sbjct: 73 LVPIVTAGDRSSGE-ISQIGGTGVFVSALRDALLSGEIDLAVHSLKDLPTATPPGLVLAA 131
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
PR D RDV ++ + + L +L + I T S RR A L + V+ RG ++TRL
Sbjct: 132 VPPRADPRDVLVAPSGRRLAELRAGARIATGSPRRAAQLRALGLGLEVVTIRGNVDTRLK 191
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE------------- 206
K + + A++LA+AG+ RL + + EIL P+PGQGA+ IE
Sbjct: 192 KAIDGEVDAVVLAHAGLARLDRLDAVTEILEPTVMLPAPGQGALAIECTGGAGLVVAGPA 251
Query: 207 --------------------------THVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ A+ L V++ + +V ERAFLA +
Sbjct: 252 RALVPAGPGSGPAVGQTGGETWSDGGQPVDTGLAELLRFVLDDASSSVAVRAERAFLAGI 311
Query: 241 DGSCKSAIAGFA 252
+ C + + A
Sbjct: 312 EAGCTAPVGALA 323
>gi|317012081|gb|ADU82689.1| porphobilinogen deaminase [Helicobacter pylori Lithuania75]
Length = 306
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDAKSAFCCRLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLVGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDL 283
>gi|294815172|ref|ZP_06773815.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|294327771|gb|EFG09414.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
Length = 333
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 135/276 (48%), Gaps = 19/276 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIG-- 59
+ +G+R S LA A E L + + P H +++ GDR TL+ +
Sbjct: 8 YFVGSRASNLAKAQVREYLRPLRE--RFPEITFTHRVIL----EGGDRDRTSTLSAVSAV 61
Query: 60 -GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G F+ E L G++D VHS KD+PT GL + RED+RD T L
Sbjct: 62 NGGSAFSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDALCGSTLAGL 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ A +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++R
Sbjct: 122 RKGAR---VGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA--QELVKVINHEDTWDSVNCERAF 236
L + I ++L ++ FPPSPGQGA+ I+ ++ A ++L+ + +V ERA
Sbjct: 179 LGLDDAIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERAL 238
Query: 237 LAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGK 271
LAEL G C + +A L G V + DG+
Sbjct: 239 LAELHGGCSVPVGAYAEPLPNGELSLAGQVTSLDGR 274
>gi|254387445|ref|ZP_05002684.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|326443531|ref|ZP_08218265.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197701171|gb|EDY46983.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
Length = 329
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 135/276 (48%), Gaps = 19/276 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIG-- 59
+ +G+R S LA A E L + + P H +++ GDR TL+ +
Sbjct: 4 YFVGSRASNLAKAQVREYLRPLRE--RFPEITFTHRVIL----EGGDRDRTSTLSAVSAV 57
Query: 60 -GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G F+ E L G++D VHS KD+PT GL + RED+RD T L
Sbjct: 58 NGGSAFSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDALCGSTLAGL 117
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ A +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++R
Sbjct: 118 RKGAR---VGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRR 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA--QELVKVINHEDTWDSVNCERAF 236
L + I ++L ++ FPPSPGQGA+ I+ ++ A ++L+ + +V ERA
Sbjct: 175 LGLDDAIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERAL 234
Query: 237 LAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGK 271
LAEL G C + +A L G V + DG+
Sbjct: 235 LAELHGGCSVPVGAYAEPLPNGELSLAGQVTSLDGR 270
>gi|111075012|gb|ABH04865.1| porphobilinogen deaminase [Heliobacillus mobilis]
Length = 187
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL + L ++ P + + TKGD+I + L +IG KG
Sbjct: 5 QRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKIGDKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L L
Sbjct: 63 LFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHG-GLDALP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ RL
Sbjct: 122 QGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRL 178
>gi|315650219|ref|ZP_07903294.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986]
gi|315487576|gb|EFU77884.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986]
Length = 309
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 37/314 (11%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RIGTR S LALA ++ + P I +P++T GD+ + +L EIGGKG
Sbjct: 4 KEIIRIGTRKSALALAQTKLVGDAVK--NSFPHIKIEYVPMNTIGDKRLDISLQEIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH----TAQSL 118
LFT+E+E+ LI G+ID A+HSAKD+P + L++ L R +RDV + +
Sbjct: 62 LFTKELEEALIKGDIDLAIHSAKDLPLEFDNRLKLMPVLKRGAVRDVLVVKNDCPVDLQI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
KDL IGTSS RR + +I ++ RG + TR+ K+ + ++LA AG+ R
Sbjct: 122 KDLPRGFRIGTSSKRRSEQAMLLNHNIKIVPIRGNVLTRIGKIFSGDTDGVILARAGLDR 181
Query: 179 L--------KKEKVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHED 225
L + +K+++++ NI D P+P QG +C + E++K I ED
Sbjct: 182 LLADTNCAGECDKILQKV-NITDIKETDILPAPAQGILC--GQYASDYISEVLKKIQDED 238
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGF-----------AYCKGSTLYFYGIVLASDGKIFH 274
N ER +L+ L+ C ++ + AY +G Y I + +F
Sbjct: 239 CNILFNAERKYLSVLEADCHTSAGIYIKKDRDNYSIKAYFEGK----YQIAYSDSKGLFD 294
Query: 275 EVSRNGNRCDAINI 288
V N+ N+
Sbjct: 295 MVENTANKLKRKNV 308
>gi|292654255|ref|YP_003534152.1| porphobilinogen deaminase [Haloferax volcanii DS2]
gi|291372938|gb|ADE05165.1| porphobilinogen deaminase [Haloferax volcanii DS2]
Length = 363
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 149/329 (45%), Gaps = 60/329 (18%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LA A A + +L ++ ++ + T GDRI + + +G G F
Sbjct: 5 LRLATRGSALARAQAASVQGALAGRRL----DVELVEVETTGDRIQDELIHRLGKTGAFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++++++ GE+D AVHS KDMPT+ L ++ R DV ++ + DL +
Sbjct: 61 RALDERVLDGEVDAAVHSMKDMPTEKPADLVVAGVPERAPAGDVLVTAEGHDIDDLPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-------------NNNKAH----- 167
V+GTSSLRR+A LL +R D+ V RG ++TR+ KL N+K
Sbjct: 121 VVGTSSLRRQAQLLNYRDDLEVEPLRGNVDTRIEKLLATHLQREHEARVENDKERQGKKG 180
Query: 168 ------------------------------------AILLAYAGIKRLK-KEKVIKEILN 190
AI+LA AG+KR EKV E L
Sbjct: 181 KTDHDEAFDETADEWFEGLTELERQALGRQVETEYDAIVLAEAGLKRSGLTEKVNYERLP 240
Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
F P+PGQGAI + T ++ + + ++H T ER LAEL G C + +
Sbjct: 241 RTTFVPAPGQGAIAV-TAADSVVIELIRDKLDHPRTRVETTVERTILAELGGGCIAPVGV 299
Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
A +G ++ VLA+DG + SR+
Sbjct: 300 HALLQGEHVHVDVQVLATDGSESIKTSRD 328
>gi|108562665|ref|YP_626981.1| porphobilinogen deaminase [Helicobacter pylori HPAG1]
gi|123073837|sp|Q1CUR5|HEM3_HELPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|107836438|gb|ABF84307.1| porphobilinogen deaminase [Helicobacter pylori HPAG1]
Length = 306
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 148/282 (52%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + +
Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++++ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+
Sbjct: 183 KAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEKSAFCCRLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDL 283
>gi|227549755|ref|ZP_03979804.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078141|gb|EEI16104.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM
44291]
Length = 301
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 11/292 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LA A R ++ H+ + ++T GD ++ E G G+FT
Sbjct: 2 LHIGTRGSHLATTQAGHVRDDIIAAG----HDAELTIVTTPGD--LSQAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ L GE++ AVHS KD+PT I +P RED R+ I+ L DL
Sbjct: 56 SALRDALFRGEVEIAVHSFKDLPTADEPRAHI--VVPAREDNREALIARDGMQLADLPQG 113
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ + RG IE+R+ ++ + + AI+LAYAG+ R
Sbjct: 114 ARVGTSAPRRISQLKALRPDLDIRPLRGNIESRMGRVTSGELDAIVLAYAGLLRAGYGDR 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + +F P+P QGA+ +E ++ + + ++ + T V+ ER LA L+ C
Sbjct: 174 ATQLFDASEFLPAPAQGALAVECRSDDAETRAVLDPLMDAATALQVSAERHVLATLEAGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A A+ G L V A DG H++ +G+ A + R+AA+ +
Sbjct: 234 TAPVAAHAFYDGGELSLRAGVFALDGS--HQLVESGSVTVADTLDREAARGL 283
>gi|25026992|ref|NP_737046.1| porphobilinogen deaminase [Corynebacterium efficiens YS-314]
gi|259508525|ref|ZP_05751425.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314]
gi|39931582|sp|Q8FSF7|HEM3_COREF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23492272|dbj|BAC17246.1| putative hydroxymethylbilane synthase [Corynebacterium efficiens
YS-314]
gi|259163875|gb|EEW48429.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314]
Length = 299
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 12/269 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R L + IV P GD N + E G G+FT
Sbjct: 3 LRIGTRGSKLATTQAGHMRDRLKHFGRDAELTIVTTP----GD--VNMSPVERIGVGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + L++ EID AVHS KD+PT + +P R D RD I+ +L++L
Sbjct: 57 QALRDALVADEIDVAVHSFKDLPTA--PDPRFHLVVPTRADARDALIARDGLTLEELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKALRPDLEILPLRGNIDTRMGKVTSGELDAVVLAFAGLSRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + + P+P QGA+ IE V + + ++ H DT+ + ER L L+ C
Sbjct: 175 ATQVFDPDMLMPAPAQGALAIECRVEDEDIITGLNMLMHADTYVTAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYC---KGSTLYFYGIVLASDG 270
+ +A A G T+ V A DG
Sbjct: 235 TAPVAAHATLDGYAGDTMTLTAGVFALDG 263
>gi|255513653|gb|EET89918.1| porphobilinogen deaminase [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 301
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 131/253 (51%), Gaps = 7/253 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII-PLSTKGDRITNRTLTEIG 59
M + IGTR S LA+A A R+ L + IV I L+ K DR RT +I
Sbjct: 1 MSESEITIGTRGSELAVAQAEIVRNKLAAIEPRISFRIVKIKTLNEKVDRSKARTEKDI- 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
+T+EI++ ++ ID AVHS KD+ + + +QI A R+D RDVFI +T +
Sbjct: 60 ----YTKEIDEAILERRIDIAVHSLKDLKFNMDENMQIGAVPDRDDPRDVFIGNTETEFE 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +++GTSS+RR+ L R + D G I+TRL+KLN+ + I++A AG+KRL
Sbjct: 116 HLGTDALVGTSSIRRRVQLTRINPKPMISDLHGNIDTRLSKLNSGEFSGIVIAAAGVKRL 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K V + + D P+ GQGAI + H +N A EL+K I++ V E F
Sbjct: 176 GK-AVRMQYFDERDVVPAIGQGAIAVTVHKDNSAAAELLKRIDNMKARVEVGEEIEFGKA 234
Query: 240 LDGSCKSAIAGFA 252
C I A
Sbjct: 235 FGTGCNLPIGANA 247
>gi|317013683|gb|ADU81119.1| porphobilinogen deaminase [Helicobacter pylori Gambia94/24]
Length = 306
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 148/282 (52%), Gaps = 5/282 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A + L + I + T GD+I + L +IGGKGLFT+E
Sbjct: 6 IGSRGSELALWQANHIKERLKKECSMESE---IQIVKTTGDKILDAPLNKIGGKGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +
Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186
GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + +
Sbjct: 123 GTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYR 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+
Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
I A G + ++ +GK + G++ A ++
Sbjct: 242 PIGVHASLMGDEVKIRAVLGLPNGKEVITKEKQGDKTKAFDL 283
>gi|297159419|gb|ADI09131.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1]
Length = 345
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 15/301 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + ++ V P + ++ ++T+GD ++ L +IGG G+F
Sbjct: 29 PLRLGTRRSALAMAQSGQIADAVRRVTGRP---VELVEITTRGD-VSREDLAQIGGTGVF 84
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GEID AVHS KD+PT L ++A RED RD I+ + +L
Sbjct: 85 ATALREALLRGEIDFAVHSLKDLPTAQPDDLVLAALPAREDPRDALIARDGLTFAELPPG 144
Query: 125 SVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR + L W RS I + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 145 ARIGTGSPRRTSQLRAWARSLGLRIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLARLG 204
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ EIL+ + P+PGQGA+ +E N + ++ T +V ER+ LA L
Sbjct: 205 RLDEATEILDADHILPAPGQGALAVECAAANAALAAQLAELDDPLTRVAVTAERSLLAAL 264
Query: 241 DGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ C + + A G + + G+V +DG ++S G A G +AAQ
Sbjct: 265 EAGCSAPVGALADLLGDGQAVTEMRLRGVVGTTDGSSLVQLSITGPVPTA--PGEEAAQL 322
Query: 296 I 296
+
Sbjct: 323 M 323
>gi|116199079|ref|XP_001225351.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51]
gi|88178974|gb|EAQ86442.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51]
Length = 343
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 133/256 (51%), Gaps = 16/256 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++GTR S LAL ++L H PH + ++T GDR + L E+G KGL+
Sbjct: 8 IKMGTRRSALALRQTELVIAALQSAH---PHVTFEVHAMATAGDRDKSTPLPEMG-KGLW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS------- 117
T E+E KL++ ++D VHS KDMPT L +G + RED RDV I A+
Sbjct: 64 TSELEAKLVARDVDVIVHSLKDMPTTLPEGCVLRCVPAREDPRDVVIFSKAREEAGRYKK 123
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
LKDL +V+GTSS+RR A L R + D RG IETRL K + AI+LA AG+
Sbjct: 124 LKDLPEGAVVGTSSVRRAAQLKRRYPGLVFRDVRGNIETRLRKCDEEGFDAIILAAAGLL 183
Query: 178 RLKKEKVIKEIL--NIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
RL I + L N E + GQG + +E ++ + +EL+K I T + E
Sbjct: 184 RLDLGARIAQYLDSNTEGGGLLHAVGQGGLGLEVREDDEQMKELLKAIEDTPTMTACFAE 243
Query: 234 RAFLAELDGSCKSAIA 249
R+ + L+G C I
Sbjct: 244 RSVMRTLEGGCSVPIG 259
>gi|111220451|ref|YP_711245.1| porphobilinogen deaminase 1 [Frankia alni ACN14a]
gi|111147983|emb|CAJ59649.1| Porphobilinogen deaminase 1 (PBG 1) (Hydroxymethylbilane synthase
1) (HMBS 1) (Pre-uroporphyrinogen synthase 1) [Frankia
alni ACN14a]
Length = 402
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
++P+ T GDR + +++IGG G+F + L++GEID AVHS KD+PT GL ++A
Sbjct: 60 LVPIVTAGDR-SPAEISQIGGTGVFVSALRDALLAGEIDLAVHSLKDLPTATPPGLVLAA 118
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
RED RDV +S + + L L + + T + RR A L V+ RG ++TRL
Sbjct: 119 VPTREDTRDVLVSPSGRGLAALGPGARVATGAPRRAAQLRALGLGFDVVAIRGNVDTRLK 178
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
K + + A++LAYAG+ RL + + EIL+ E P+PGQGA+ +E
Sbjct: 179 KAIDGEVDAVVLAYAGLARLDRLDAVTEILDPEVMLPAPGQGALAVE 225
>gi|327329283|gb|EGE71043.1| hydroxymethylbilane synthase [Propionibacterium acnes HL103PA1]
Length = 315
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 14/232 (6%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
++ + ++T GD I+ +L +GG G+F I L+ GE D AVHS KD+PT GL
Sbjct: 12 DVDLTTITTHGD-ISTASLAAMGGIGVFASAIRATLLKGEADIAVHSFKDLPTGRPLGLA 70
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T
Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130
Query: 157 RLNKL----------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
RL ++ A++LA +G+ RL + E L+ P+P QGA+ +E
Sbjct: 131 RLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDPSVVLPAPAQGALAVE 190
Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
+ + +L K + D T + ERA L+ L+ C + I A K
Sbjct: 191 CRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242
>gi|145294537|ref|YP_001137358.1| porphobilinogen deaminase [Corynebacterium glutamicum R]
gi|158513580|sp|A4QB59|HEM3_CORGB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23507698|gb|AAN38291.1| porphobilinogen deaminase [Corynebacterium glutamicum]
gi|140844457|dbj|BAF53456.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 302
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 12/295 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA A R L + +IV P GD N + E G G+FT
Sbjct: 3 LKIGTRGSKLATTQAGTIRDQLKYFGRDAELHIVTTP----GD--VNMSPVERIGVGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + L +GE D AVHS KD+PT + +P R D R+ I+ +L +L
Sbjct: 57 QALRDVLHAGECDVAVHSMKDLPTAADPRFHL--VVPTRADSREALIARDGLTLAELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C
Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A A G T+ V A DG S G+ +G AQ +
Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQL 289
>gi|296823866|ref|XP_002850512.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
gi|238838066|gb|EEQ27728.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
Length = 334
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 146/280 (52%), Gaps = 16/280 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIGTR S LA+ A + L + P H I L T GD+ N +L G K L
Sbjct: 9 RPLRIGTRRSNLAIIQAKAIQDQLQKLA--PEHTFEIEALHTIGDKDQNSSLYNFGAKNL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
+T E+E+ L SG++D VH KDMPTKL ++A R+D RD I SL+
Sbjct: 67 WTTELEELLTSGKLDVVVHCLKDMPTKLPDSCDLAAIPLRDDPRDALIVKVGLPYTSLQS 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKR 178
L +V+GTSS+RR A L R ++ I+ RG +ETRL KL++ ++ I+++ G++R
Sbjct: 127 LPEGAVVGTSSVRRSAQLCRLFPNLRFINIRGNVETRLAKLDDPQSEYTCIIMSACGLER 186
Query: 179 LKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELV-KVINHEDTWDSVNCERA 235
+ I + + +D + GQGAI +E + K L+ ++++H+ + + ERA
Sbjct: 187 VGLGYRINQRIGSKDGGILHAVGQGAIGLEVRKGDTKILHLLDQLVDHKSSLACL-AERA 245
Query: 236 FLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDG 270
+ L+G C I G TL GIV++ DG
Sbjct: 246 LMRTLEGGCSVPIGVETEWIGDSEVYLTLRIRGIVISLDG 285
>gi|327539486|gb|EGF26101.1| porphobilinogen deaminase [Rhodopirellula baltica WH47]
Length = 315
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 128/247 (51%), Gaps = 16/247 (6%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
I+PL +KGD R + GLFT+ I++ L+ E D AVHS KD+PT+ ++A
Sbjct: 20 IVPLVSKGD-TDMRPIDGTRQVGLFTKRIQQALVDDEADVAVHSLKDLPTEPDSRFVLAA 78
Query: 100 YLPREDIRDVFI-----------SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
PRE + D + + L L + +GT S RR A L + R D+ V+
Sbjct: 79 VPPRESVLDALVFADNSPHLEPQTGAESPLDYLPQGARVGTGSTRRLAQLKQLRPDLEVL 138
Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208
RG ++TRL KLN + AI+LA+AGI RL+ + + +++ P+PGQGA+ IE
Sbjct: 139 PIRGNVQTRLAKLNAGEFDAIVLAHAGILRLEMTDLPHRLFPLDEMIPAPGQGALGIEVR 198
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK----GSTLYFYGI 264
++ A + +N + ER L+EL G C + IA A + G+ L I
Sbjct: 199 SDDAGAMHAIANLNDAAARLAATAERKVLSELHGGCLAPIACHAKLETSNHGTELCLRAI 258
Query: 265 VLASDGK 271
V+++DG+
Sbjct: 259 VMSADGE 265
>gi|326383045|ref|ZP_08204734.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395]
gi|326198181|gb|EGD55366.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395]
Length = 315
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 140/275 (50%), Gaps = 20/275 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A + L P +VII ST GD ++ + +IG G+FT
Sbjct: 9 IRIGTRGSLLATTQAQDIADRLTAAGH--PAELVII--STAGD-TSSAPVAQIG-VGVFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I L SGE D A+HS KD+PT L ++A R D RD +S L +L S
Sbjct: 63 TAIRLALRSGECDVAIHSYKDLPTAPEDDLAMAAVPTRVDPRDALVSRDGMVLGELPSGS 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR A L + + RG +++RL K+ + + AI++A AG+ R+ + V+
Sbjct: 123 VVGTSSPRRAAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAIVVARAGLVRIGRADVV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWDSVNCERAFLAELDG 242
E L+ +P QGA+ +E ++ ELV+++ D T +V+ ERA LA L+
Sbjct: 183 TEALDPLVMLSAPAQGALAVECRSDD---AELVRILAELDDPSTRAAVDAERAVLATLEA 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
C + + A S + DG+IF E+S
Sbjct: 240 GCTAPVGALAEVVDS--------IDEDGRIFAELS 266
>gi|70999177|ref|XP_754310.1| porphobilinogen deaminase Hem3 [Aspergillus fumigatus Af293]
gi|66851947|gb|EAL92272.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus
Af293]
gi|159127327|gb|EDP52442.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus
A1163]
Length = 362
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 10/274 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ R L + P I L T GDR L + G K L+
Sbjct: 42 PLRIGTRRSNLAMVQTEGIRDRLQKIG--PDRTYEIEALRTAGDRDQLTALYDFGAKSLW 99
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121
T E+E+KL SGE+D VH KDMPT L +++A PR+D RD I SLK L
Sbjct: 100 TTELEEKLTSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIIKAGLPYTSLKSL 159
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ AG++R+
Sbjct: 160 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPHSEYMCMVMSAAGLERV 219
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + L D + GQGA+ +E + K QEL+ + + + ER+ +
Sbjct: 220 GLKHRISQYLGSRDGGILYAVGQGALGLEIRKGDRKMQELLGQLADRKSTLACLAERSLM 279
Query: 238 AELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDG 270
L+G C I + L IV++ DG
Sbjct: 280 RTLEGGCSVPIGVETEWMSSGDLRMDAIVVSLDG 313
>gi|219852323|ref|YP_002466755.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c]
gi|219546582|gb|ACL17032.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c]
Length = 294
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 140/286 (48%), Gaps = 16/286 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA E S++ I +VI +T GD +T L EIGG+G+F
Sbjct: 3 IRVGTRGSALARVQT-EKVCSMLASRGIETETVVI---TTHGDAVTGVPLHEIGGQGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++ + + EIDCAVHS KD+P G+ A L R D ++ +
Sbjct: 59 RALDDAIEAQEIDCAVHSLKDVPALRPPGVLTCAVLKRNSPADFLAVDAVENPQ------ 112
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IG+SS RR+A LLR + V RG ++TR+ KL + I+LA AG++RL
Sbjct: 113 IIGSSSTRRRAQLLRHDPSLEVKQLRGNVDTRIRKLKAGEYDGIVLAEAGLQRLGLSLKG 172
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K L +++F PSP QG + + + + L ++HE T V ERA + EL G C
Sbjct: 173 KR-LPVDEFVPSPNQGTVAVVCREDPSLIETLACALDHEGTRQDVVFERAVMEELGGGC- 230
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-DAINIGR 290
+ YC+ + VLA DG + + + + +A IGR
Sbjct: 231 -FVPEGVYCRDG--HLIAEVLALDGSRYQRIEADPSDVREAREIGR 273
>gi|50424323|ref|XP_460748.1| DEHA2F08888p [Debaryomyces hansenii CBS767]
gi|55976377|sp|Q6BM23|HEM3_DEBHA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49656417|emb|CAG89089.1| DEHA2F08888p [Debaryomyces hansenii]
Length = 361
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 156/315 (49%), Gaps = 17/315 (5%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IG R S LA+ + + + V K P + ++ LST GD++ ++ L GGK L+T+
Sbjct: 20 QIGGRKSKLAVVQSEIVKECI--VEKFPELSCSVLALSTLGDKVQSKPLYSFGGKALWTK 77
Query: 67 EIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
E+E L+ +D VHS KD+PT L + ++ L RED RD + + +SL
Sbjct: 78 ELEILLLEQVEEYPRLDLIVHSLKDIPTNLPEEFELGCILNREDARDALVMKSGSSYKSL 137
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
DL S++GTSS+RR + LL+ + RG ++TRLNKL+ N+ +LLA AG+
Sbjct: 138 ADLPDGSLVGTSSVRRSSQLLKNHPKLRFDSVRGNLQTRLNKLDDENSPFECLLLASAGL 197
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I L+ + + GQGA+ IE + K +L+K I T ER+
Sbjct: 198 IRIGLGDRITAHLDAPEMYYAVGQGALGIEIRKGDEKMLQLLKTIEDLPTTYCCLAERSL 257
Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291
+ L+G C I ++ ST L I+++ DG F E G N+ DA IG
Sbjct: 258 MRHLEGGCSVPIGVQSHYNESTNELSLKAIIVSPDGIHFVEDEYKGVVNNKDDADAIGIK 317
Query: 292 AAQYIRFISNKNVFN 306
+ + + N
Sbjct: 318 VGDLLSAKGGREILN 332
>gi|314964545|gb|EFT08645.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA1]
Length = 315
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 118/232 (50%), Gaps = 14/232 (6%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
++ + ++T GD T +L +GG G+F I L+ GE D AVHS KD+PT GL
Sbjct: 12 DVNLTTITTHGDTSTA-SLAAMGGIGVFASAIRAALLEGETDIAVHSFKDLPTGRPLGLA 70
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T
Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130
Query: 157 RLNKL--------NNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
RL ++ N K A++LA +G+ RL + E L+ P+P QGA+ +E
Sbjct: 131 RLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVE 190
Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
+ + +L K + D T + ERA L+ L+ C + I A K
Sbjct: 191 CRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242
>gi|302410259|ref|XP_003002963.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102]
gi|261357987|gb|EEY20415.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102]
Length = 353
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 146/304 (48%), Gaps = 20/304 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ +L + P + I + T GD+ L GGKGL+T
Sbjct: 21 VRIGTRRSALAVRQTELVIEALKRIR--PDYTYEIHAMQTLGDKDQVTALYNFGGKGLWT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF-----ISHTAQSLKD 120
E+E KL + EID VHS KDMPT L +G + A + RE+ DV ++ +S+ D
Sbjct: 79 NELEAKLTNNEIDVIVHSLKDMPTVLPEGCILGAVVERENPHDVVVFKDTVADQYKSIAD 138
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178
L SV+GTSS+RR A L R + D RG I+TRL KL+N AI+LA AG+ R
Sbjct: 139 LPAGSVVGTSSIRRIAQLKRKYPGLQFADVRGNIQTRLAKLDNPDGPFTAIILAAAGLLR 198
Query: 179 LKKEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+ I + L + + GQGA+ IE ++ + L++ I H T + ER+
Sbjct: 199 MDLGGRIGQYLASDTGGILHAVGQGALGIEARTDDDRVLTLLRGIEHGPTRLAAEAERSV 258
Query: 237 LAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRC-----DAINIG 289
+ L+G C I + G TL V DG H V R A +G
Sbjct: 259 MRTLEGGCSVPIGVETTWRDDGKTLTLKASVTHVDGT--HGVDGESTRVIESPEAADQLG 316
Query: 290 RDAA 293
RD A
Sbjct: 317 RDLA 320
>gi|126640355|ref|YP_001083339.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978]
Length = 226
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 119/212 (56%)
Query: 85 KDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSD 144
KD+P L +GL ++ RED D F+S+ + DL + +GTSSLRRK+ +L+ R D
Sbjct: 2 KDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVGTSSLRRKSQILKQRPD 61
Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204
+ +ID RG + TRL KL++ + AI+LA AG+KRL + I+ + P+ GQGA+
Sbjct: 62 LQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAERIRHCIEPSVSLPAVGQGALG 121
Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264
+E ++ + L++ + H +T V ERAF A L+G C+ IAG+A + ++ G
Sbjct: 122 LECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGGCQVPIAGYATLQDGKIHIEGR 181
Query: 265 VLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
V + DG+ +A +G + A+ +
Sbjct: 182 VGSVDGQTLLRAELTDEANNAQQLGENLARNL 213
>gi|313765242|gb|EFS36606.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA1]
gi|313793133|gb|EFS41200.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA1]
gi|313821951|gb|EFS59665.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA1]
gi|313834370|gb|EFS72084.1| porphobilinogen deaminase [Propionibacterium acnes HL056PA1]
gi|314926611|gb|EFS90442.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA3]
gi|314931036|gb|EFS94867.1| porphobilinogen deaminase [Propionibacterium acnes HL067PA1]
gi|314969645|gb|EFT13743.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA1]
gi|314974711|gb|EFT18806.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA1]
gi|314980332|gb|EFT24426.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA2]
gi|314985507|gb|EFT29599.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA1]
gi|314987331|gb|EFT31422.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA2]
gi|315082096|gb|EFT54072.1| porphobilinogen deaminase [Propionibacterium acnes HL078PA1]
gi|315097342|gb|EFT69318.1| porphobilinogen deaminase [Propionibacterium acnes HL038PA1]
gi|315099447|gb|EFT71423.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA2]
gi|315106337|gb|EFT78313.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA1]
gi|327445624|gb|EGE92278.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA2]
gi|327447246|gb|EGE93900.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA1]
gi|327457080|gb|EGF03735.1| porphobilinogen deaminase [Propionibacterium acnes HL092PA1]
gi|328758364|gb|EGF71980.1| porphobilinogen deaminase [Propionibacterium acnes HL020PA1]
Length = 315
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 118/232 (50%), Gaps = 14/232 (6%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
++ + ++T GD T +L +GG G+F I L+ GE D AVHS KD+PT GL
Sbjct: 12 DVNLTTITTHGDTSTA-SLAAMGGIGVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLA 70
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T
Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130
Query: 157 RLNKL--------NNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
RL ++ N K A++LA +G+ RL + E L+ P+P QGA+ +E
Sbjct: 131 RLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVE 190
Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
+ + +L K + D T + ERA L+ L+ C + I A K
Sbjct: 191 CRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242
>gi|70997451|ref|XP_753473.1| hydroxymethylbilane synthase [Aspergillus fumigatus Af293]
gi|66851109|gb|EAL91435.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus
Af293]
gi|159126797|gb|EDP51913.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus
A1163]
Length = 341
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 148/291 (50%), Gaps = 14/291 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ F IGTR S LAL ++L P + I T GD+ T L E K
Sbjct: 16 RRTFTIGTRKSKLALLQTDLVVAALK--KSWPEYTFQIHSQETAGDKNTVIALREFTTKN 73
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + S
Sbjct: 74 LWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMSFS 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
++ SV+GTSS+RR A L R + V D RG I TRL KL+ + I+LA AG+
Sbjct: 134 EMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIVLAAAGLL 193
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL E I + L+ ++ + GQGA+ +E ++ ++++ I H+ T + ER+
Sbjct: 194 RLGMEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKVLRDMLNSIGHQKTTLACLAERS 253
Query: 236 FLAELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVSRNGN 281
L L+G C + + + S L IV++ DG+ EV +G+
Sbjct: 254 LLRTLEGGCSAPLGVETEWVQDSDRSSKLRMRAIVVSVDGRESAEVEVDGS 304
>gi|150865873|ref|XP_001385264.2| hypothetical protein PICST_47071 [Scheffersomyces stipitis CBS
6054]
gi|149387129|gb|ABN67235.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 372
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 146/283 (51%), Gaps = 16/283 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IG R S LA+ + + + + PH N I+ LST GD+I N+ L GGK L+
Sbjct: 26 IQIGGRKSTLAVVQSEIVKKEIEEAF---PHINCSILALSTLGDKIQNKPLYSFGGKSLW 82
Query: 65 TEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116
T+E+E L+ ++D VHS KDMPT L ++ L RED RD + +
Sbjct: 83 TKELEILLLDSIDEFPQLDLIVHSLKDMPTNLPDEFELGCILKREDPRDALVMRAGSPYK 142
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174
+L DL SV+GTSS+RR + L++ + RG ++TRL+KL+++ I+LA A
Sbjct: 143 TLDDLPAGSVVGTSSIRRSSQLVKNYPHLKFDSVRGNLQTRLSKLDDDSQPFECIILASA 202
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R+ + + LN + GQGA+ +E N+ K + ++ I+H T ER
Sbjct: 203 GLIRVGLGHRVTDYLNAPHMYYAVGQGALGVEIRKNDTKMKNILAKISHIPTSLCCYAER 262
Query: 235 AFLAELDGSCKSAIAGFA-YCKGS-TLYFYGIVLASDGKIFHE 275
+ + L+G C I Y + S L F I+++ DG F E
Sbjct: 263 SLMRYLEGGCSVPIGVHTNYDEDSKVLKFEAIIVSPDGTQFVE 305
>gi|313896614|ref|ZP_07830163.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974799|gb|EFR40265.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 190
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKKMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G+ID AVHS KDMP ++ GL I A R D D F+S+ ++++
Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPIEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+
Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLD 160
>gi|237786464|ref|YP_002907169.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM
44385]
gi|237759376|gb|ACR18626.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM
44385]
Length = 295
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 147/299 (49%), Gaps = 20/299 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGL 63
RIGTR S LAL A R +L+ + + T GD + T + G G+
Sbjct: 2 IRIGTRGSALALTQAGHVRDALISAGL----EAELFTVHTPGD-ASQGAGTPVARIGVGV 56
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ + L +GE AVHS KD+PT ++ A PR D RDV S L DL
Sbjct: 57 FTQTLRTALAAGECSLAVHSFKDLPTAPDPRFRL-AVPPRVDARDVVFSRDRIPLADLPA 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S+IGT + RR + R D +V+ RG ++TR+ +L + A++LA AG++RL +
Sbjct: 116 GSMIGTGAPRRMGQVRALRPDCTVVPIRGNVDTRIGRLEKDL-DAVILARAGVERLGRLA 174
Query: 184 VIKEILNIEDFPPSPGQGAICIET----HVN-NPKAQELVKVINHEDTWDSVNCERAFLA 238
E L+++ P+P QGA+ +E H N + +A + V++HE + ERA LA
Sbjct: 175 EATETLDVDTVLPAPAQGALAVEAVAEGHENCSEEALYAIHVLDHEMSHRRAIAERAVLA 234
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+ C + + +A + F V A DG S G + +IG AA+Y+R
Sbjct: 235 SLNAGCTAPVGAYA----TEDSFRAGVFAVDGSERVTWSSEGEPTE--DIGHQAAEYLR 287
>gi|50557014|ref|XP_505915.1| YALI0F26609p [Yarrowia lipolytica]
gi|55976378|sp|Q6C097|HEM3_YARLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49651785|emb|CAG78727.1| YALI0F26609p [Yarrowia lipolytica]
Length = 338
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 15/312 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G R S LAL + L VH P ++ ++ L+T GD++ ++ L GK L+T+E
Sbjct: 21 VGGRKSKLALVQTQHVAAMLKKVH--PDYSFPVLGLTTLGDQVQSKPLYSFDGKALWTKE 78
Query: 68 IEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
+E L+ + D VHS KDMPT L G ++ A L RED RD + ++L
Sbjct: 79 LETLLLEKVPGFDQQDIIVHSLKDMPTVLPDGCELGAILTREDPRDALVMAAGSPYKTLA 138
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
DL SV+GTSS+RR A L + + RG + TRL+KL++ + ++LA AG+K
Sbjct: 139 DLPAGSVVGTSSIRRSAQLKKSYPGLVYESVRGNVGTRLSKLDDPETPYKCLILAAAGLK 198
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L D + GQGA+ +E + K +++++ I +++ ERA +
Sbjct: 199 RLDLGDRITGYLQKPDMLHAVGQGALGLEIRQGDEKTKKILEAIYDKESTLCCLAERAVM 258
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRDAAQ 294
L+G C I + L IV++ +G F E ++ +A +G+D A+
Sbjct: 259 RTLEGGCSVPIGVETKYENGKLTLDAIVVSVEGTEFVECTQVRAVEENWEAEQLGKDVAE 318
Query: 295 YIRFISNKNVFN 306
+ K + +
Sbjct: 319 QLVKDGAKKILD 330
>gi|297618662|ref|YP_003706767.1| porphobilinogen deaminase [Methanococcus voltae A3]
gi|297377639|gb|ADI35794.1| porphobilinogen deaminase [Methanococcus voltae A3]
Length = 316
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 131/255 (51%), Gaps = 17/255 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ L ++ + II + T GD+ N+ L ++G G+F
Sbjct: 5 IRIGTRGSKLAMVQTNYVNEILNKEIQTNKDIDTEIIKIKTVGDKDQNKKLVDLG-LGVF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+K ++ E D AVHS KD+PT L I A PRE D+ I + L
Sbjct: 64 TKEIDKSMLLNETDIAVHSLKDVPTLWSDELIIKAVPPRESYNDLLIWKKNRKLNVFQDD 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
V+GTSS+RR A L ++ V RG ++TRL KL++ + AI++A AG+ RL
Sbjct: 124 IVVGTSSIRRAAFLEIRYPNLDVKLLRGNVQTRLKKLDDEEYDAIIMAEAGLNRLN---- 179
Query: 185 IKEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+N+ED+ P+P QGAI I T + + E+V++++ + T V ER L
Sbjct: 180 ----INLEDYNYEVLNMLPAPAQGAIGIATRKADEEINEIVELLDDKKTHLEVLAERNAL 235
Query: 238 AELDGSCKSAIAGFA 252
E G C++ A
Sbjct: 236 KEYGGGCQAPFGALA 250
>gi|295395608|ref|ZP_06805802.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030]
gi|294971627|gb|EFG47508.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030]
Length = 821
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 23/300 (7%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHN---IVIIPLSTKGDRITNRTLTEIG 59
+ R+GTR S LA RS + V + I H + I+ + T+GD + L +G
Sbjct: 499 RTVRLGTRRSNLA-------RSQSVGVAQDIAAHTGWRVEIVEVVTEGD-VNMTPLANMG 550
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + + L+SG+ID AVHS KD+PT G+ ++A PR D DV ++ +
Sbjct: 551 GTGVFVSAVRQALLSGKIDIAVHSLKDLPTAQAPGITLAAVPPRVDPSDVLVARDGLTFD 610
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +V+GT S RR A + R D+ + RG ++TR+ + + + A++LA AG++RL
Sbjct: 611 TLPQGAVVGTGSPRRAAQMRAARPDLDIRGVRGNVDTRIKYVTDGRLDAVVLAAAGMRRL 670
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNN-------PKAQELVKVINHEDTWDSVNC 232
+ + + L E P+PGQGA+ IE N K + + I+ E T+ +V
Sbjct: 671 GRLAEVSQTLTTELMLPAPGQGALAIECRAENADREPFDAKLRSGLLAIHDETTYRAVVA 730
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIG 289
ERA L+ C + I A ++ ++ GK I V+ G AI++G
Sbjct: 731 ERAILSRAQAGCSAPIGALANVTERSIELSAVMADDAGKLARITRSVANTGVNA-AIDVG 789
>gi|330507063|ref|YP_004383491.1| porphobilinogen deaminase [Methanosaeta concilii GP-6]
gi|328927871|gb|AEB67673.1| porphobilinogen deaminase [Methanosaeta concilii GP-6]
Length = 305
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 8/268 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR SPLAL + L K + + T GD ++ L ++ G G+F E
Sbjct: 1 MGTRGSPLALRQTQIVQERL----KGLGIQTQLCRVKTSGDVFLDKPLHQLTGFGVFVAE 56
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLALHS 125
I+++++SG+ID AVHS KD+PTK + L +SA L R+ DV + + +S+++L +
Sbjct: 57 IDERMLSGKIDLAVHSMKDLPTKRPEELIVSAVLKRDSPYDVLLCREKSVKSIEELDQGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR A LLR R D++++ RG ++TRL+KL AI+LA AG++R+
Sbjct: 117 RVGTSSMRRMAQLLRARPDLNILSLRGNLQTRLSKLERGDYDAIVLAEAGLERMGYHPDY 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ E F PS QG I + + +A+ + ++ ER + + G C
Sbjct: 177 VR-LDGERFVPSANQGTIIVVAKAGS-EAEACSRALDDAHARSETMIERKIMETVGGGCV 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+A A + VL+ DGK F
Sbjct: 235 VPMAVHALVQKGEARVLAEVLSPDGKRF 262
>gi|316935323|ref|YP_004110305.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1]
gi|315603037|gb|ADU45572.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1]
Length = 326
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 147/308 (47%), Gaps = 22/308 (7%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K P RIGTR S +ALA + L ++ P II T GD L GGK
Sbjct: 2 KFPVRIGTRKSVMALAQTEDIAKQLSAAASELDPQ---IIKFETVGDSDQISKLLPHGGK 58
Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L+
Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLE 118
Query: 120 DL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------- 165
DL IGT+++RR A R ++ VI FRG ++R+ KL+N +
Sbjct: 119 DLKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNGEKQRMPDGSEV 178
Query: 166 --AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++
Sbjct: 179 GPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDN 238
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ + ER L L+G C S IA + G + VL +G +F E R G
Sbjct: 239 HQSRLCCDAEREVLWVLNGHCNSPIAAHSIITGDEMTLRASVLDLEGGMFIEAVRTGPAN 298
Query: 284 DAINIGRD 291
+GRD
Sbjct: 299 RPRELGRD 306
>gi|313814512|gb|EFS52226.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA1]
gi|314922347|gb|EFS86178.1| porphobilinogen deaminase [Propionibacterium acnes HL001PA1]
gi|314965338|gb|EFT09437.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA2]
gi|314982570|gb|EFT26662.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA3]
gi|315091095|gb|EFT63071.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA4]
gi|315094182|gb|EFT66158.1| porphobilinogen deaminase [Propionibacterium acnes HL060PA1]
gi|315104838|gb|EFT76814.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA2]
Length = 315
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 14/232 (6%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
++ + ++T GD T +L +GG G+F I L+ GE D AVHS KD+PT GL
Sbjct: 12 DVDLTTITTHGDTSTA-SLAAMGGIGVFASAIRATLLKGEADIAVHSFKDLPTGRPLGLA 70
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T
Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130
Query: 157 RLNKL----------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
RL ++ A++LA +G+ RL + E L+ P+P QGA+ +E
Sbjct: 131 RLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDPSVVLPAPAQGALAVE 190
Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
+ + +L K + D T + ERA L+ L+ C + I A K
Sbjct: 191 CRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242
>gi|254445937|ref|ZP_05059413.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235]
gi|198260245|gb|EDY84553.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235]
Length = 291
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 132/256 (51%), Gaps = 24/256 (9%)
Query: 4 KPFR---IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
KP R I TR SPLA+A + +P I + T GD+ +L + GG
Sbjct: 3 KPAREYVIATRKSPLAMAQTHLAKELFQ--RGMPDAVFRIEKMVTTGDKRQEWSLEKQGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E L+ G D AVHSAKD+P+++ KGL ++ +LPR+ DV I L+D
Sbjct: 61 KGLFTKELEDALLEGRADFAVHSAKDLPSEMPKGLALAGFLPRQTCEDVLI------LRD 114
Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +I T S RR+ L + RG ++TRL K+ A A +LA AG+ RL
Sbjct: 115 GVESPKLIATGSPRRRIQLRYLFPKAEFTEIRGNVDTRLTKIARGDADATVLASAGLNRL 174
Query: 180 ---KKEKVIKEILNIEDFPPSPGQGAI---CIETHVNNPKAQELVKVINHEDTWDSVNCE 233
E V L +++ P+ GQ A+ C E V+ +A E+T +VN E
Sbjct: 175 GIESWEGVTFRKLTLDECVPAVGQAAVAIQCREEDVDTFRAH------LDEETAIAVNLE 228
Query: 234 RAFLAELDGSCKSAIA 249
R+FL EL G C+ A A
Sbjct: 229 RSFLEELGGGCQVAFA 244
>gi|90422760|ref|YP_531130.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB18]
gi|90104774|gb|ABD86811.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB18]
Length = 326
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 151/313 (48%), Gaps = 32/313 (10%)
Query: 5 PFRIGTRCSPLALAHA------FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
P RIGTR S +ALA +S +DV I+ T GD L
Sbjct: 4 PVRIGTRKSIMALAQTEDIARRLSAAASELDVE--------IVKFETVGDSDQVSKLLPH 55
Query: 59 GGKG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQ 116
GGKG F EI + +G+++ +HS KDMP + GL I A L R+ D +
Sbjct: 56 GGKGGAFVAEIRAAVTAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPPTDALVLRKGL 115
Query: 117 SLKDL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------- 165
+L+DL IGT+++RR A R +++VI FRG +TR+ KL+N +
Sbjct: 116 TLEDLRKSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRVRKLDNAEKQRLPDG 175
Query: 166 -----AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
A A+++A +G++R+ I ++ PS GQG + +E VNN + ++ +++
Sbjct: 176 GHVGPADALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVNNWQIRKYLEL 235
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
I+ S + ER L L+G C S +A F+ KGS + VL +G +F E SR+G
Sbjct: 236 IDDPVARLSCDAEREVLWVLNGHCNSPMAAFSTIKGSEMTLSASVLDEEGGLFIEASRSG 295
Query: 281 NRCDAINIGRDAA 293
+GR A
Sbjct: 296 PANRPRELGRAVA 308
>gi|296131260|ref|YP_003638510.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109]
gi|296023075|gb|ADG76311.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109]
Length = 342
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL +L D+ + + + T+GDR+ +L +GG G+F
Sbjct: 5 VRIGTRASALALTQTGHVADALADLAD---LAVETVRVRTQGDRV-RASLASLGGTGVFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L+ G D AVHS KD+PT GL ++A PR D RD + +L L +
Sbjct: 61 TALRDALLDGRCDVAVHSLKDLPTGPADGLVVAAVPPRADARDALCARDGLTLATLPAGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA------------------- 166
IGT S RR A L R D+ V+D RG + TRL ++ A
Sbjct: 121 RIGTGSPRRAAQLRALRPDVDVVDIRGNVGTRLGRVRGLDATTVATGSQVGPDAPHPGVA 180
Query: 167 --------HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-----VNNPK 213
A++LA AG+ RL + + E + P+PGQGA+ +E + P
Sbjct: 181 TDAPRGDLDAVVLAAAGLGRLGRLDAVTEWFAPDVLAPAPGQGALAVEVRTADAAADTPL 240
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
A L + ++ T +V ERA LA L+ C + + + +T
Sbjct: 241 AHAL-RALDDPPTRRAVVAERAVLARLEAGCAAPVGAWGRVDDAT 284
>gi|333025240|ref|ZP_08453304.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
gi|332745092|gb|EGJ75533.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
Length = 307
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 137/262 (52%), Gaps = 20/262 (7%)
Query: 36 HNIVIIPLSTKGDRITNRT-LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94
++ ++ ++T GD T+R L IGG G+F + L+ G++D AVHS KD+PT +G
Sbjct: 17 RSVELVEITTYGD--TSREHLARIGGTGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEG 74
Query: 95 LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALL-LRWRS---DISVIDF 150
L ++A RED RD I+ +L+ L + IGT S RR A L R+ DI +
Sbjct: 75 LALAAVPRREDPRDALIARDGLTLERLPRGARIGTGSPRRMAQLNAHARAHGLDIETVPI 134
Query: 151 RGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN 210
RG ++TR+N + + + A++LA AG+ RL + + L + P+PGQGA+ +E
Sbjct: 135 RGNVDTRINFVRDGELDAVVLAAAGLNRLGRGGEVTAYLASDTVLPAPGQGALAVECP-P 193
Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----------L 259
P A+ L + ++ T +V ERA LA L+ C + + A G+ +
Sbjct: 194 GPLAEALAR-LDDPRTRAAVTAERALLAALEAGCSAPVGALADFTGAPQDQAAQRQTTEM 252
Query: 260 YFYGIVLASDGKIFHEVSRNGN 281
G+V ++DG +++ G+
Sbjct: 253 RLRGVVGSTDGSELVQLTTTGH 274
>gi|156846242|ref|XP_001646009.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM
70294]
gi|156116680|gb|EDO18151.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM
70294]
Length = 327
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 158/321 (49%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ IG R S LA+A + + + + + + P + I+ L T GD+I ++ L GG
Sbjct: 1 MSKEVLVIGGRSSKLAVAQSTKVKELIEE--QFPQYECRIVALKTLGDQIQSKPLYSFGG 58
Query: 61 KGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF---ISH 113
K ++T+E+E L + ID VHS KD+PT L G +I A R D D I
Sbjct: 59 KAVWTKELEDLLYHEDAKERIDLIVHSLKDVPTLLPDGFEIGAITKRVDPSDCLVMPIDS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILL 171
+SL DL S++GTSS+RR A L R + RG I TRL K+++ ++H I+L
Sbjct: 119 KYKSLDDLPNGSIVGTSSIRRSAQLKRRYPHLKFESVRGNIHTRLKKVDDPESHYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + N + GQGA+ IE + K + ++ I+ E+T
Sbjct: 179 AAAGLIRMGLESRITQTFNSTMMYHAVGQGAMGIEIREGDEKLRNILSKISDEETTVCCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDG----KIFHEVSRNGNRCDA 285
ER+ + L+G C I S L GIV+ DG + H + ++ D+
Sbjct: 239 AERSLMRTLEGGCSVPIGVETKYDASKKELLLKGIVVDVDGTKAIEEQHSIIIQDSKEDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
+ G+ A+ ++ K + +
Sbjct: 299 MACGKALAEKMKQAGAKTILD 319
>gi|227832129|ref|YP_002833836.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
gi|262184020|ref|ZP_06043441.1| porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
gi|254800247|sp|C3PKG2|HEM3_CORA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|227453145|gb|ACP31898.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
Length = 296
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 10/286 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA + + L +IV +T+GD N E G G+FT
Sbjct: 2 LKIGTRGSLLATTQSGHVQEWLQQKGYEAELHIV----TTQGD--VNMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + + + GE + AVHS KD+PT + + +P R+D+R+ I+ +LK+L
Sbjct: 56 QALREAVDRGECEIAVHSFKDLPTAADERFDL--VVPQRQDVREALIARDGLTLKELPEG 113
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ + RG I+TR+ K+ + + A+LLAYAG+ R +
Sbjct: 114 ARVGTSAPRRISQLRAMRPDLDIRPLRGNIDTRMGKVTSGELDAVLLAYAGLVRAGYAER 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ + E F P+P QGA+ IE V +A + + ++ + ER L++L+ C
Sbjct: 174 ATEVFDPEVFMPAPAQGALAIEA-VKGTEAAKAIALLADGPATAATRAERTVLSQLEAGC 232
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+ +A ++ +G L G V A DG G +A +GR
Sbjct: 233 TAPVAATSHWEGEQLVVRGGVFALDGSRQLIAQAQGAASEAEELGR 278
>gi|291518806|emb|CBK74027.1| porphobilinogen deaminase [Butyrivibrio fibrisolvens 16/4]
Length = 239
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 114/207 (55%), Gaps = 9/207 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIGGKGLF 64
++GTR S LAL +T + + K P N ++ + T GD +R L +IG KGLF
Sbjct: 3 IKVGTRGSKLALV---QTNYVIEQLKKAFPENEYEVVVIKTTGDIDQSRPLDQIGSKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L++ EI AVHS KDMP+K KG + RED RDV I S+++L +
Sbjct: 60 VDEIERALVADEIQLAVHSMKDMPSKPAKGCVFAKSWTREDARDVIIFREVDSIEELPKN 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-----HAILLAYAGIKRL 179
+ I T S RR LL R D+ + RG I+TRL KL + I+LA AG+ RL
Sbjct: 120 AKIATGSKRRSYQLLSLRPDLELCPIRGNIDTRLRKLVEGNSDGTILDGIVLAAAGLNRL 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIE 206
K +IL +++ PSP QG + IE
Sbjct: 180 KISLDHYQILEVDEMIPSPAQGTLAIE 206
>gi|302884312|ref|XP_003041052.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI
77-13-4]
gi|256721948|gb|EEU35339.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI
77-13-4]
Length = 332
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 9/254 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R SL + P I L T GD+ + L G K
Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRDSLQKIA--PDRTFEIEALKTLGDKDKSTALYSFGAKN 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T E+E+KL SG+ID VH KDMPTKL +++A R+D RD I + +LK
Sbjct: 66 LWTTELEEKLTSGDIDVVVHCLKDMPTKLPDTCELTAIPLRDDPRDALIVKASLPYNNLK 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ G++
Sbjct: 126 TLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIMSACGLQ 185
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ I + L +D + GQGA+ +E + K EL+ + + + + ERA
Sbjct: 186 RVGLGHRITQFLGSKDGGIYHAVGQGALGLEIRKGDTKTLELINQLVDQKSTLACLAERA 245
Query: 236 FLAELDGSCKSAIA 249
L L+G C I
Sbjct: 246 LLRTLEGGCTVPIG 259
>gi|227505107|ref|ZP_03935156.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940]
gi|227198310|gb|EEI78358.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940]
Length = 295
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 10/285 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA + R L +IV +T GD N E G G+FT
Sbjct: 2 FKIGTRGSKLATTQSGHVREWLKANGFESELHIV----TTHGD--VNMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + + L GE D AVHS KD+PT + + +P R+D+R+ ++ +L L
Sbjct: 56 QALREALYGGECDIAVHSFKDLPTAADERFLL--VVPERQDVREALVARDGLTLAQLPEG 113
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ + RG I+TR+ K+ + + A++LAYAG+ R + +
Sbjct: 114 ARVGTSAPRRISQLKAMRPDLDIQPLRGNIDTRMGKVTSGELDAVVLAYAGLVRADYQDM 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ + F P+P QGA+ IE ++ A+ + +I+ + + S+ ER L+ L+ C
Sbjct: 174 ASEVFAPDTFMPAPAQGALAIEAVKDSAAARAIETLIDEQASAASLG-ERTVLSRLEAGC 232
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ +A + + L G V A DG S G DA +G
Sbjct: 233 TAPVAATSTIENGQLTVRGGVFALDGSRQLLASATGPLSDAAQLG 277
>gi|326472408|gb|EGD96417.1| porphobilinogen deaminase [Trichophyton tonsurans CBS 112818]
gi|326481632|gb|EGE05642.1| porphobilinogen deaminase [Trichophyton equinum CBS 127.97]
Length = 331
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 148/293 (50%), Gaps = 17/293 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKRGQPKTTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGF-------AYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
L L+G C SA G A KG L IV + DGK E+ ++ N
Sbjct: 243 LLRTLEGGC-SAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCN 294
>gi|289615845|emb|CBI57434.1| unnamed protein product [Sordaria macrospora]
Length = 338
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 152/312 (48%), Gaps = 19/312 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K
Sbjct: 5 QKQTVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---- 117
GL+T E+E KL + E+D VH KD+PT L +G +I RED RDV + +
Sbjct: 62 GLWTNELEAKLFNNEVDFIVHCLKDVPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 121
Query: 118 ---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
L DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A
Sbjct: 122 YKVLADLPEGAIVGTSSVRRAAQLRRQYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 181
Query: 175 GIKRLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T +
Sbjct: 182 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 241
Query: 231 NCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ERA + L+G C I + + L V++ DGK S +G + +
Sbjct: 242 FAERAVMRSLEGGCSVPIGVETKWVEDDKLQLKATVVSLDGK----ESVDGQSVEVVKTT 297
Query: 290 RDAAQYIRFISN 301
+A + R ++
Sbjct: 298 EEAEEMGRKLAE 309
>gi|315110126|gb|EFT82102.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA2]
Length = 315
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 117/232 (50%), Gaps = 14/232 (6%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
++ + ++T GD T +L +GG G+F I L+ GE D AVHS KD+PT GL
Sbjct: 12 DVNLTTITTHGDTSTA-SLAAMGGIGVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLA 70
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T
Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130
Query: 157 RLNKL--------NNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
RL ++ N K A++LA +G+ RL + E L+ P+P QGA+ +E
Sbjct: 131 RLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVE 190
Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
+ + + K + D T + ERA L+ L+ C + I A K
Sbjct: 191 CRTADSRHGKFAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242
>gi|212695966|ref|ZP_03304094.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM
7454]
gi|212677089|gb|EEB36696.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM
7454]
Length = 318
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 6/292 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IG+R S LAL A + + D+ + I+ +STKGDRI +R + ++ KG+F
Sbjct: 3 KIGSRASKLALIQA----NMVKDILEKEGLEAQIVEISTKGDRIRDRKIDQLNSKGVFVR 58
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D +++
Sbjct: 59 EIEEKLLDKTIDIAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDVFKKMDDLNNAL 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT S RR S+I RG +ETR+ K+ + ++LA +G+ R + I
Sbjct: 119 VGTGSNRRVCQGKNHFSNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEIN 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ F PSP QG + IE + K E+ K + E T + ERAF EL C +
Sbjct: 179 FDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCST 238
Query: 247 AIAGFAYCKGSTLYFYG-IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ F + G + D +I +E +GN + I++ + A+ ++
Sbjct: 239 PMGIFTEIDHDKITLTGSMAFDKDDRINYE-RVSGNISERIHLAQKLARTLK 289
>gi|164423255|ref|XP_001728039.1| porphobilinogen deaminase [Neurospora crassa OR74A]
gi|55976426|sp|Q6MW51|HEM3_NEUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|38566782|emb|CAE76093.1| related to hydroxymethylbilane synthase [Neurospora crassa]
gi|157070012|gb|EDO64948.1| porphobilinogen deaminase [Neurospora crassa OR74A]
Length = 337
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 141/282 (50%), Gaps = 15/282 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K
Sbjct: 4 QKETVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------ 115
GL+T E+E KL + E+D VH KDMPT L +G +I RED RDV +
Sbjct: 61 GLWTNELEAKLFNKEVDFIVHCLKDMPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 120
Query: 116 -QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+SL DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A
Sbjct: 121 YKSLADLPEGAIVGTSSVRRAAQLRRRYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 180
Query: 175 GIKRLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T +
Sbjct: 181 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 240
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGS-TLYFYGIVLASDGK 271
ERA + L+G C I G L V++ DGK
Sbjct: 241 FAERAVMRTLEGGCSVPIGVETKWVGEDQLQLKVTVVSLDGK 282
>gi|15897134|ref|NP_341739.1| porphobilinogen deaminase [Sulfolobus solfataricus P2]
gi|284174377|ref|ZP_06388346.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2]
gi|25453029|sp|Q980U4|HEM3_SULSO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|13813317|gb|AAK40529.1| Porphobilinogen deaminase [Sulfolobus solfataricus P2]
gi|261601798|gb|ACX91401.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2]
Length = 293
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 135/244 (55%), Gaps = 8/244 (3%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
+I + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A
Sbjct: 33 VIDIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADVAVHSMKDILSEINPELEIFA 91
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
+ R+ D+ I+ ++L L ++ IGTSS+RRK + R +I+ D RG ++TR+
Sbjct: 92 VIERDPPYDILIAE--KNLHKLDPNTTIGTSSIRRKNFIKYIRPEINTKDIRGNVDTRIR 149
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
K + + ++LA A IKRL + LN+ DF P QG I + + K +E+ K
Sbjct: 150 KYLSKEYDGLILAEASIKRLNIS-ISYHRLNVYDFTPEANQGIIVVLGRKKDEKVKEVFK 208
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277
I H+DT D ERA ++ + G C S I +G FYGI SDG KI +S
Sbjct: 209 EITHKDTLDEALAERATISVVGGGCHSPIGVLFRKEGKE--FYGIASYSDGKKKITVSIS 266
Query: 278 RNGN 281
+ G+
Sbjct: 267 KAGD 270
>gi|327297350|ref|XP_003233369.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892]
gi|326464675|gb|EGD90128.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892]
Length = 331
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 148/293 (50%), Gaps = 17/293 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKTTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGF-------AYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
L L+G C SA G A KG L IV + DGK E+ ++ N
Sbjct: 243 LLRTLEGGC-SAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCN 294
>gi|300770169|ref|ZP_07080048.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC
33861]
gi|300762645|gb|EFK59462.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC
33861]
Length = 528
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 24/262 (9%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LA+ A + L ++ T+GD I + L ++ GKG FT+E
Sbjct: 7 IGTRGSQLAMWQANHIKDRLAAAGIDSELKVI----KTQGDIIQHLRLDKLEGKGFFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD------- 120
+E++L+S ID AVHS KD+PT GL I+A RE ++ I LKD
Sbjct: 63 LEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLI-----VLKDCVDIKKR 117
Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG++R
Sbjct: 118 LSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGVER 177
Query: 179 LK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ E ++EI +E P+P QG + I+ ++ + E ++VI++++ + + ER
Sbjct: 178 IDMDLSEFYVEEIPPVE-LIPAPAQGVLAIQIRESDQELYEALQVIHNKEVAEVIAVERK 236
Query: 236 FLAELDGSCKSAIAGFAYCKGS 257
L D C + + YC+ S
Sbjct: 237 VLNLFDAGCHAPLG--CYCRKS 256
>gi|229581489|ref|YP_002839888.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51]
gi|259709752|sp|C3NF70|HEM3_SULIN RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|228012205|gb|ACP47966.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51]
Length = 293
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 8/244 (3%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A
Sbjct: 33 IIDIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+
Sbjct: 92 VLKRDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
K + + ++LA A +KRL LN+ DF P QG I + K +E+ K
Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277
INH+DT D ERA ++ + G C S I +G FYGI SDG KI +S
Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS 266
Query: 278 RNGN 281
+ G+
Sbjct: 267 KPGD 270
>gi|227828214|ref|YP_002829994.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25]
gi|229585443|ref|YP_002843945.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27]
gi|259646265|sp|C3MZR8|HEM3_SULIA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|259709751|sp|C3MYD9|HEM3_SULIM RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|227460010|gb|ACP38696.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25]
gi|228020493|gb|ACP55900.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27]
Length = 293
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 6/232 (2%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A
Sbjct: 33 IIDIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+
Sbjct: 92 VLERDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
K + + ++LA A +KRL LN+ DF P QG I + K +E+ K
Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
INH+DT D ERA ++ + G C S I +G FYGI SDGK
Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGK 258
>gi|227830973|ref|YP_002832753.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15]
gi|238620405|ref|YP_002915231.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4]
gi|284998461|ref|YP_003420229.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5]
gi|259709727|sp|C4KIZ9|HEM3_SULIK RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|259709750|sp|C3MJ21|HEM3_SULIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|227457421|gb|ACP36108.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15]
gi|238381475|gb|ACR42563.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4]
gi|284446357|gb|ADB87859.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5]
Length = 293
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 8/244 (3%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A
Sbjct: 33 IIDIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+
Sbjct: 92 VLERDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
K + + ++LA A +KRL LN+ DF P QG I + K +E+ K
Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277
INH+DT D ERA ++ + G C S I +G FYGI SDG KI +S
Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS 266
Query: 278 RNGN 281
+ G+
Sbjct: 267 KPGD 270
>gi|119478980|ref|XP_001259519.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL
181]
gi|119407673|gb|EAW17622.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL
181]
Length = 341
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 149/291 (51%), Gaps = 14/291 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ F IGTR S LAL ++L P + I T GD+ T L E K
Sbjct: 16 RRTFTIGTRKSKLALMQTDLVVAALK--KSWPEYTFQIHSQETAGDKNTVIALREFTTKN 73
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + +
Sbjct: 74 LWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMAFS 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
++ SV+GTSS+RR A L R + V D RG I TRL KL+ + I+LA AG+
Sbjct: 134 EMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIILAAAGLL 193
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL E I + L+ ++ + GQGA+ +E ++ ++++ I H +T + ER+
Sbjct: 194 RLGLEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKLLRDMLSSIGHHETTMACLAERS 253
Query: 236 FLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDGKIFHEVSRNGN 281
L L+G C + + GS+ L IV++ DG+ EV +G+
Sbjct: 254 LLRTLEGGCSAPLGVETEWVQDSDGSSKLRMRAIVVSVDGRESAEVEVDGS 304
>gi|221059912|ref|XP_002260601.1| Porphobilinogen deaminase [Plasmodium knowlesi strain H]
gi|193810675|emb|CAQ42573.1| Porphobilinogen deaminase, putative [Plasmodium knowlesi strain H]
Length = 449
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 153/333 (45%), Gaps = 71/333 (21%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITNRTLTEIGGK 61
K IGTR SPLA+ + + R+ L K N+ I + T GD I ++ + GGK
Sbjct: 65 KEIIIGTRDSPLAIKQSEKVRTKLEAYFKKVNKNVKITLKSIKTMGDNILDQKVDLFGGK 124
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+E++++LI G++ VHS KD+P +L + +Q+S +L R+ I D F+S +L+D+
Sbjct: 125 GIFTKELDEELIKGKVHICVHSLKDVPMELPEQVQLSCFLKRDTINDAFLSVKYGTLEDM 184
Query: 122 ALHSV---------------------------------------IGTSSLRRKALLLRWR 142
+ IGTSSLRR + +
Sbjct: 185 NKMKMANKMEEGSYQPKGMSQRVINQNVKRDNYEGDHYDNFIPTIGTSSLRRSSQIKYKY 244
Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI-------------- 188
+++V + RG I TR+ KL N + AI++A G++RL +K I+ I
Sbjct: 245 KNVAVKNMRGNINTRIAKLCNGQYDAIIIAKCGLERLTTKKGIRNIIGGKNKVTPKNFLI 304
Query: 189 ----------------LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
+N P+ QG I + +H ++ +++K IN E N
Sbjct: 305 NYNNTEINLTSLHIQQINKRTIYPALCQGIIAVSSHKSDKYISDVLKNINDEKAQIMANI 364
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265
ER+FL +++G+C I G+A + F ++
Sbjct: 365 ERSFLYQIEGNCMMPIGGYAKIVNGEIVFNAVI 397
>gi|330946190|ref|XP_003306713.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1]
gi|311315692|gb|EFQ85212.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1]
Length = 398
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 135/277 (48%), Gaps = 14/277 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60
P IGTR S LA A SL D + P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVVVQGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQ 116
K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
+L L ++IGTSS+RR A L + + D RG + TRL KL+ ++ AI+LA A
Sbjct: 148 TLATLPQGAIIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLGKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDDAMKELMSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
ERA L L+G C I KG G A D
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLAVGPQPAKD 304
>gi|323475281|gb|ADX85887.1| porphobilinogen deaminase [Sulfolobus islandicus REY15A]
gi|323478006|gb|ADX83244.1| porphobilinogen deaminase [Sulfolobus islandicus HVE10/4]
Length = 293
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 6/232 (2%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A
Sbjct: 33 IINIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+
Sbjct: 92 VLERDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
K + + ++LA A +KRL LN+ DF P QG I + K +E+ K
Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
INH+DT D ERA ++ + G C S I +G FYGI SDGK
Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGK 258
>gi|301630715|ref|XP_002944462.1| PREDICTED: porphobilinogen deaminase-like, partial [Xenopus
(Silurana) tropicalis]
Length = 291
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--- 114
IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 1 IGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRY 60
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAY 173
+L L SVIGTSSLRR A L + + D RG + TR+ KL+ + AI+LA
Sbjct: 61 GNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAA 120
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG++R+ E I +IL ++ + GQGA+ IE + +V + +T E
Sbjct: 121 AGLRRMGWENRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAE 180
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
RAF+ L+G C +A K S LY G V + DG
Sbjct: 181 RAFMKRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDG 217
>gi|190345502|gb|EDK37399.2| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC
6260]
Length = 371
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 150/286 (52%), Gaps = 18/286 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +IG R S LA+A + + L V K P I+ LST GD+I ++ L GGK L
Sbjct: 10 KHIQIGGRKSTLAVAQSNIVKKHL--VAKFPQLKCSILALSTLGDQIQSQPLYSFGGKAL 67
Query: 64 FTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--- 115
+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV +
Sbjct: 68 WTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRSDPRDVLVMRKGSKY 127
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+SL +L +++GTSS+RR + L++ + RG I TR+ KL+ ++ +LLA
Sbjct: 128 KSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLLAA 187
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC- 232
AG++R+ + I L+ D + GQGA+ +E + + ++L++ I ED S+ C
Sbjct: 188 AGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAI--EDVPTSLCCH 245
Query: 233 -ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHE 275
ER+ + L+G C I +T L F IV++ DG F E
Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVE 291
>gi|229579851|ref|YP_002838250.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14]
gi|259709753|sp|C3N841|HEM3_SULIY RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|228010566|gb|ACP46328.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14]
Length = 293
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 8/244 (3%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A
Sbjct: 33 IIDIKTKADLFSTDPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+
Sbjct: 92 VLERDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
K + + ++LA A +KRL LN+ DF P QG I + K +E+ K
Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277
INH+DT D ERA ++ + G C S I +G FYGI SDG KI +S
Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS 266
Query: 278 RNGN 281
+ G+
Sbjct: 267 KPGD 270
>gi|226478112|emb|CAX72749.1| hydroxymethylbilane synthase [Schistosoma japonicum]
Length = 413
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 29/288 (10%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL E SL+ V K PH + ++ ++T GD I + L++IG K LFT
Sbjct: 11 RVGSRRSNLALLQT-EMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDKSLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLA 122
+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L DL
Sbjct: 68 KELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKLSDLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-----------NKA---HA 168
+ + +GTSS+RR A L+R + I RG + TRL KL+ N++ A
Sbjct: 128 VGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSLSYDA 187
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
++LA AG++R+ I ++L+ + S QGA+ E NN +L+ +I+ E +
Sbjct: 188 LILAKAGVERMGWVDRIDQVLSDSFYAVS--QGALACECLQNNTFIMDLLSLIHDESSAL 245
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDG 270
+ ER+ + +LDG C I+ + K S L + +L+ DG
Sbjct: 246 TAIAERSLMHQLDGGCSIPISVRSDLTLKEDFKSSKLTLHANILSVDG 293
>gi|307595857|ref|YP_003902174.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429]
gi|307551058|gb|ADN51123.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429]
Length = 304
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 10/296 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S L+L +T + + ++ P+ +I + T GD I ++ L IG KG+F
Sbjct: 3 IRIATRGSRLSL---IQTEIVMNMIRRVEPNVRFDVIIVRTTGDVIQDKPLYAIGVKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ L+ E D AVHS KD+P+++ GL ++ + PR+ DV + + +AL
Sbjct: 60 EKEVNLALLRNEADIAVHSLKDLPSEISPGLVVAGFSPRDPPFDVLVVKDDYPSELMALP 119
Query: 125 S--VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179
S +GTSS+RR+A LL R DIS+ RG ++TR+NKL AI++A AG+ RL
Sbjct: 120 SGARVGTSSVRRRAFLLNVRRDISINVIRGNVDTRINKLIRGDYDAIVIAEAGLVRLIND 179
Query: 180 -KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
K + ++ + PP+PGQG I + + +L+ + ERAFL
Sbjct: 180 VKSLNIKYTRISPDVLPPAPGQGIIAVVAREKDTDLVDLLNKASDPKARAEALAERAFLR 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+ G C + G A +G+ + F + +G+ V +G+ + +G +AA+
Sbjct: 240 TIGGGCHVPVGGMAIHEGARMEFIAGMADLNGERKVLVKLSGSPSNPEELGVNAAR 295
>gi|213616301|ref|ZP_03372127.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 168
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 93/156 (59%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189
+ TRL KL+N AI+LA AG+KRL E I+ L
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTAL 160
>gi|39934577|ref|NP_946853.1| porphobilinogen deaminase [Rhodopseudomonas palustris CGA009]
gi|39648426|emb|CAE26947.1| putative porphobilinogen deaminase [Rhodopseudomonas palustris
CGA009]
Length = 327
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 22/309 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K P RIGTR S +ALA + L ++ P II T GD L G
Sbjct: 1 MVKFPVRIGTRKSVMALAQTEDIAKQLSAAASELDPQ---IIKFETVGDSDQISKLLPHG 57
Query: 60 GKG-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQS 117
GKG F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +
Sbjct: 58 GKGGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLT 117
Query: 118 LKDLALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-------- 165
L++L IGT+++RR A R ++ VI FRG ++R+ KL+N +
Sbjct: 118 LEELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGS 177
Query: 166 ----AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I
Sbjct: 178 EVGPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALI 237
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
++ + + ER L L+G C S IA + G + VL +G +F E +R G
Sbjct: 238 DNHQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGP 297
Query: 282 RCDAINIGR 290
+GR
Sbjct: 298 ANRPRELGR 306
>gi|154298906|ref|XP_001549874.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10]
gi|150857605|gb|EDN32797.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10]
Length = 379
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 151/306 (49%), Gaps = 20/306 (6%)
Query: 3 KKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59
+KP IGTR S LA+ + +++L H PH N I L T GD+ L + G
Sbjct: 48 EKPATIHIGTRKSALAMVQTEQVKAALEKAH---PHLNFEITKLETMGDKNQVTALHDFG 104
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116
K L+T E+E L+ ++D VH KDMPT+L I A L RED RD I +
Sbjct: 105 AKSLWTHELEALLLDRKLDIVVHCLKDMPTQLPSKCIIGAILEREDPRDALIMKAGSNYK 164
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174
SL +L SV+GTSS+RR A + R ++ + RG I TRLNKL ++ K ++LA A
Sbjct: 165 SLSELPAGSVVGTSSVRRSAQIARKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAA 224
Query: 175 GIKRLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ R+ + I + L+ + + GQGA+ +E + + ++ + HE T +
Sbjct: 225 GLLRMGWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEIGTMISALQHEPTQLAG 284
Query: 231 NCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ER+ + L+G C I + + L IV++ DG S R + I
Sbjct: 285 LAERSLMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGT----ESVESERLEEILTP 340
Query: 290 RDAAQY 295
+DA ++
Sbjct: 341 KDADEF 346
>gi|15668749|ref|NP_247548.1| porphobilinogen deaminase [Methanocaldococcus jannaschii DSM 2661]
gi|2495178|sp|Q57989|HEM3_METJA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|1591276|gb|AAB98563.1| porphobilinogen deaminase (hemC) [Methanocaldococcus jannaschii DSM
2661]
Length = 292
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 29/258 (11%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + + ++ K + + I + T GDR+ ++ L++IG G+FT
Sbjct: 2 IRIGTRGSKLALYQA----NKVAELLKNLGYKVEIKIIKTTGDRVLDKKLSDIG-IGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + KD+ +
Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYHDLLIWN-----KDIDFNE 111
Query: 126 ----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
VIGTSS+RR+A L + RG ++TRL KL AI+L+ AGI RL
Sbjct: 112 DSKIVIGTSSMRRRAFLKFIYPNAKFELLRGNVDTRLRKLKEGLYDAIVLSEAGIIRLG- 170
Query: 182 EKVIKEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+++EDF P+P QG I + ++ + + ++K INHE T+ CER
Sbjct: 171 -------VSLEDFNYKRLDILPAPAQGIIAVACKRDDEEMKSILKEINHERTYLESLCER 223
Query: 235 AFLAELDGSCKSAIAGFA 252
L E G C A
Sbjct: 224 TALNEFGGGCSVPFGALA 241
>gi|256425452|ref|YP_003126105.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588]
gi|256040360|gb|ACU63904.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588]
Length = 307
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 147/294 (50%), Gaps = 7/294 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +IGTR S LAL A + + L + ++ V++P+ ++GD L EIG +G+
Sbjct: 3 REIKIGTRDSQLALWQANKVKGLL----EAQGYSTVLVPIKSEGDIDLVTPLYEIGVQGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLA 122
FT+ ++ L++G ID AVHS KD+PT+L K + +A L R ++D+ + + L
Sbjct: 59 FTKSLDIALLNGRIDIAVHSLKDVPTQLPKNIIQAAVLERGPVKDLLVYRQDTAFLGQPE 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ I TSS+RRKA LR + + RG + TRL KL + A AG++R+
Sbjct: 119 YIANIATSSVRRKAQWLRKYPKHQLHNLRGNVNTRLQKLAAENWDGAIFAAAGLERIGVR 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+P QGA+ ++ ++ N T ER FL L G
Sbjct: 179 PATS--IELDWMLPAPAQGAVVAVCREDDDFCRQACAPFNDLATALCTRVERDFLRTLMG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + I+ +A T++F G + + DG+ ++ DA IGR AA+ I
Sbjct: 237 GCTTPISAYATISNETVHFSGELCSLDGQQLFTITEQLPLQDAGVIGRSAAEKI 290
>gi|310794330|gb|EFQ29791.1| porphobilinogen deaminase [Glomerella graminicola M1.001]
Length = 347
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 127/259 (49%), Gaps = 13/259 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E +GTR S LA+ A L P + I + T GD+ L GGK
Sbjct: 9 ESGVIHVGTRKSALAMKQAEIVVEGLSKAR--PDVSFEIHGMQTLGDKDQITALYNFGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114
GL+T E+E KL + EID VHS KDMPT L G + RED RDV + H
Sbjct: 67 GLWTSELEAKLAAKEIDIIVHSLKDMPTTLPDGCTLGCVTKREDPRDVVVFKAGLAEKHG 126
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLA 172
++L DL SVIGTSS+RR A L R + D RG IETRL K ++ + AI+LA
Sbjct: 127 WKTLADLPEGSVIGTSSVRRIAQLKRRYPGLKFADVRGNIETRLRKCDDPEGPFSAIILA 186
Query: 173 YAGIKRLKKEKVIKEILNIEDFPP--SPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG+ R+ I + L E+ + GQGA+ IE + + ++K + + T +
Sbjct: 187 AAGLLRMDYGARISQFLESENSGTLHAVGQGALGIEARTGDERVLAVIKELEDKPTMLAC 246
Query: 231 NCERAFLAELDGSCKSAIA 249
ER+ + L+G C I
Sbjct: 247 FAERSVMRTLEGGCSVPIG 265
>gi|282857646|ref|ZP_06266861.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455]
gi|282584522|gb|EFB89875.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455]
Length = 245
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 129/251 (51%), Gaps = 13/251 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE----IG 59
K R G+R S LALA ++ H P + + ++P++T+GD + + +E G
Sbjct: 2 KTLRFGSRTSDLALAQTRLVMDAVGRAH--PEYRLELVPIATRGD-VDMKPFSEASDTFG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF-ISHTAQSL 118
KGLFT E+E+ L+ G ID AVHS KD+P + L + A R D RDV + A+++
Sbjct: 59 IKGLFTRELEEALLDGSIDVAVHSLKDLPAVQDERLPLLACFRRGDPRDVLALPAGAEAM 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
++IG SS RR+ L V RG + TRL KL+ + A++LA AG++R
Sbjct: 119 N----GALIGCSSARRRLQALDLFEGAEVRPVRGNVGTRLRKLDEGQFSALILAAAGLER 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + ++++ P+PGQG + + + K ++ + I D D ERAF A
Sbjct: 175 LGLRARVSRYFSLDEIVPAPGQGILACQGRAGD-KNEDWLDAIFDPDATDCARAERAFSA 233
Query: 239 ELDGSCKSAIA 249
L G C S +
Sbjct: 234 ALGGGCASPVG 244
>gi|297567358|ref|YP_003686330.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
gi|296851807|gb|ADH64822.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
Length = 304
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 143/268 (53%), Gaps = 15/268 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA A + L D +VI+ T+GDR +++ G+G FT
Sbjct: 4 VRIATRGSRLARWQAEWVAAQLQDQGIA--STLVIV--ETQGDR-ERVAFSQMQGQGFFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQSLK-D 120
+ ++ + G D AVHS KD+P+ GL ++A RED R+ + + AQ+
Sbjct: 59 KAVQDAVREGRADLAVHSLKDLPSAPTPGLVLAAIPIREDPREALLVLPSAWDAQAPALP 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA + +G+S++RR+A L + R D+ +++ RG + TR+ KL + AILLA+AG+KRL
Sbjct: 119 LAPGARVGSSAVRRQAQLAQLRPDLKLLELRGNVPTRVEKLQSGGYEAILLAWAGLKRLG 178
Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + +L +F P+PGQGA+ +E + + + +++ ++ +V ER +A
Sbjct: 179 LDLGGLAVRLLEPREFVPAPGQGALALECREEDTQLRGVLQGLDDPTARLTVGIERGLMA 238
Query: 239 ELDGSCKSAIAGFAY-CKGS--TLYFYG 263
L G C+ A+ A +G L +YG
Sbjct: 239 RLQGGCQLALGASAQRVQGGWQLLAWYG 266
>gi|15920398|ref|NP_376067.1| porphobilinogen deaminase [Sulfolobus tokodaii str. 7]
gi|25453026|sp|Q976H1|HEM3_SULTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|15621180|dbj|BAB65176.1| 294aa long hypothetical porphobilinogen deaminase [Sulfolobus
tokodaii str. 7]
Length = 294
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 142/265 (53%), Gaps = 10/265 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RI R S L+ + L HK+ I + TK D N L+++G KG+F +
Sbjct: 4 RIAARGSKLSRIQVMMVENYL---HKLGIET-EFIEIKTKADLFQNEPLSKLG-KGVFEK 58
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+ + ++ + D AVHS KD+ T++ + L+I A LPR+ D+ IS ++L +L +S+
Sbjct: 59 EVNQAVLDNKADVAVHSMKDILTEISENLEIYAVLPRDPPFDILISR--KNLFNLEPNSI 116
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSS+RRK L +R+D+++ D RG I+TRL K + I++A A I RL KE+V
Sbjct: 117 IGTSSIRRKNFLTFYRNDLNIKDLRGNIDTRLKKYFEGQYDGIIIAEASIYRL-KEQVQY 175
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ F P QG I + + +++ IN +DT + ER L+ + G C S
Sbjct: 176 YRLDPHLFTPEANQGIIVVIGRKKDETIKKIFNEINDKDTLEIAIAERKALSIVGGGCHS 235
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271
I Y + F+GI+ +S G+
Sbjct: 236 PIG--VYFEKYDKDFHGIISSSFGR 258
>gi|189200240|ref|XP_001936457.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983556|gb|EDU49044.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 399
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 134/277 (48%), Gaps = 14/277 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60
P IGTR S LA A SL D + P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVIVQGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQ 116
K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
+L L + IGTSS+RR A L + + D RG + TRL KL+ ++ AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDEAMKELMSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
ERA L L+G C I KG G A D
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLSVGPQPAKD 304
>gi|297170423|gb|ADI21455.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0070_10G19]
Length = 302
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 8/260 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R SPLA+ A + ++ + +IP+ + GD +T++ L++IGGKGLF
Sbjct: 3 IRIACRKSPLAVLQANKFIEAIQKKYG-KEIKCRLIPMHSAGD-LTDKDLSQIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLAL 123
E+E L S D AVHS KD+P KL G +I + L R + DV I + ++DL
Sbjct: 61 SELESALASDNADVAVHSLKDVPAKLNDGFEIISCLERGNPNDVIILKQNGPSVIQDLNN 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
HS I TSS RRKA + + RG I TR++K + +L+A ++RL ++
Sbjct: 121 HSKIATSSPRRKAQWKIYNPTFEFVPIRGNISTRISKFLESDLDGLLMAATALERLNIQE 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ N +D PS QG I +E ++ + + +++++ +NH++++++ ER + LD
Sbjct: 181 HHYDEFNYQDVVPSVCQGIIGMEIYLGTISQEKRQIIQSVNHQNSFNAALMEREIIKSLD 240
Query: 242 GSCKSAIAGFAYCKGSTLYF 261
C S I C+ +Y
Sbjct: 241 ADCMSPIG--VICRDKMIYL 258
>gi|192290090|ref|YP_001990695.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1]
gi|192283839|gb|ACF00220.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1]
Length = 326
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 147/307 (47%), Gaps = 22/307 (7%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K P RIGTR S +ALA + L ++ P II T GD L GGK
Sbjct: 2 KFPVRIGTRKSVMALAQTEDIAKQLSAAASELDPQ---IIKFETVGDSDQISKLLPHGGK 58
Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L+
Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLE 118
Query: 120 DLALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------- 165
+L IGT+++RR A R ++ VI FRG ++R+ KL+N +
Sbjct: 119 ELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSEV 178
Query: 166 --AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++
Sbjct: 179 GPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDN 238
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ + ER L L+G C S IA + G + VL +G +F E +R G
Sbjct: 239 HQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPAN 298
Query: 284 DAINIGR 290
+GR
Sbjct: 299 RPRELGR 305
>gi|227538630|ref|ZP_03968679.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241549|gb|EEI91564.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC
33300]
Length = 528
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 139/262 (53%), Gaps = 24/262 (9%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LA+ A + L ++ T+GD I + L ++ GKG FT+E
Sbjct: 7 IGTRGSQLAMWQANHIKDRLAAAGIDSELKVI----KTQGDIIQHLRLDKLEGKGFFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD------- 120
+E++L+S ID AVHS KD+PT GL I+A RE ++ I LKD
Sbjct: 63 LEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLI-----VLKDCVDIKKR 117
Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG++R
Sbjct: 118 LSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGVER 177
Query: 179 LK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ + ++EI +E P+P QG + I+ ++ + E ++VI++++ + + ER
Sbjct: 178 IDMDLSDFYVEEIPPVE-LIPAPAQGVLAIQIRESDQELFEALQVIHNKEVAEVIAVERK 236
Query: 236 FLAELDGSCKSAIAGFAYCKGS 257
L D C + + YC+ S
Sbjct: 237 VLNLFDAGCHAPLG--CYCRKS 256
>gi|269958021|ref|YP_003327810.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894]
gi|269306702|gb|ACZ32252.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894]
Length = 343
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 137/283 (48%), Gaps = 17/283 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA + L ++ P + ++ + T GD +T +L +GG G+F
Sbjct: 7 PLRLGTRASLLATTQSGLVAKRLEELTGRP---VELVHIRTDGDVLTG-SLASLGGTGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLAL 123
+ + L+ D AVHS KD+PT ++GL P RED RD + +L L
Sbjct: 63 VAALREALLDDRCDVAVHSLKDLPTAAVEGLTF--VTPEREDPRDALCARDGLTLDTLPR 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKK 181
+ IGT S RR A L R D+ V+D RG ++TRL + A A++LA +G+ RL +
Sbjct: 121 GARIGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLKRALGPDADLDAVVLACSGLARLGR 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNN-----PKAQELVKVINHEDTWDSVNCERAF 236
+ + L+ P+PGQGA+ +E + P A ++H T SV ERA
Sbjct: 181 TDTVTQALDPAVVAPAPGQGALAVEARTTDLAPGGPLAAAFA-ALDHRATRLSVTAERAV 239
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277
LA L+ C + + A L +V DG K+ H S
Sbjct: 240 LARLEAGCAAPVGALARVDEGQLTLTAVVARVDGTEKLRHRAS 282
>gi|187734604|ref|YP_001876716.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835]
gi|187424656|gb|ACD03935.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835]
Length = 325
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 25/272 (9%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG------GK 61
IGTR S LALA A R++L + P ++ + T GDR T+ L ++ K
Sbjct: 9 IGTRGSALALAQADMVRAALS--LRYPELDVRCEIIHTIGDRRTDVPLADVARVSGMVDK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +E+E L G ID AVHS KD+P++L G ++A LPR + DV I+ D
Sbjct: 67 GIFIKELETALRDGRIDVAVHSLKDVPSELAAGFTLAAVLPRAAVEDVLITKE----PDW 122
Query: 122 ALHSVIGTSSLRRKALLLR--WRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKR 178
+ T S+RR+ L+ R W S + + RG + TRL KL + A++LA AG++R
Sbjct: 123 NGSGTLATGSVRRR-LMARTYWGSGLRFENLRGNVPTRLGKLVEHPGWDAVILARAGLER 181
Query: 179 L---------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
L + K+ L +E F P+ GQG + +E ++ + E+++ IN +++
Sbjct: 182 LGLYAPETLVEGRKLYMRPLPVEVFIPAVGQGIVGMECRSSDRETAEMLEGINDPESFAC 241
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYF 261
ERAFL L +C + + +A+ G L
Sbjct: 242 ALAERAFLVRLGANCSTPVGVYAHPDGEELVL 273
>gi|118431819|ref|NP_148522.2| hydroxymethylbilane synthase [Aeropyrum pernix K1]
gi|152031618|sp|Q9Y9J0|HEM3_AERPE RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|116063141|dbj|BAA81310.2| hydroxymethylbilane synthase [Aeropyrum pernix K1]
Length = 307
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 138/284 (48%), Gaps = 9/284 (3%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
G+R S L + A E S V + ++ + + GD ++R L IG G+FT E+
Sbjct: 9 GSRLSLLQVEQALEELSRYAGVS----MHWEVVRVKSAGDVWSDRPLESIGVVGVFTREV 64
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKG-LQISAYLPREDIRDVFISHTAQS-LKDLALHSV 126
++ + SG D AVHS KDMPT G L+I R RD IS ++DL S
Sbjct: 65 DRAVASGAADIAVHSLKDMPTSGYGGPLKIVYIASRPSARDALISRQGPGRVEDLEPGST 124
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSS RR+AL L + I V + RG ++TRL KL AI+ + AG+ RL + V
Sbjct: 125 LGTSSARRRALSLHYNPRIRVENLRGNLDTRLRKLREGLYDAIIASEAGLIRLGVD-VEY 183
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ FPP+PGQG + + V + +++++ ++ W ER L C++
Sbjct: 184 TPLDPSYFPPAPGQGFVAVVARVGS-NVEKMLRDLDKPPWWHVAWAERGVLEGARAGCRT 242
Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A +A G S + L+ DG + G +A IG
Sbjct: 243 PVAAYAEPLGRSMVRVTAAALSPDGSRAYWARAEGRIEEARRIG 286
>gi|156064079|ref|XP_001597961.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980]
gi|154690909|gb|EDN90647.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 379
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 149/305 (48%), Gaps = 18/305 (5%)
Query: 3 KKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+KP IGTR S LA+ + +++L H P N I L T GD+ L + G
Sbjct: 48 EKPATIHIGTRKSALAMVQTEQVKAALEKAH--PNLNFEITKLETMGDKNQVTALHDFGA 105
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
K L+T E+E L+ +D VH KDMPT+L + I A L RED RD I ++
Sbjct: 106 KSLWTHELEALLLERNLDIVVHCLKDMPTQLPQKCTIGAILEREDPRDALIMKAGSNYKT 165
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAG 175
L +L SV+GTSS+RR A + ++ + RG I TRLNKL ++ K ++LA AG
Sbjct: 166 LSELPAGSVVGTSSVRRSAQIAMKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAG 225
Query: 176 IKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
+ R+ + I + L+ + + GQGA+ +E + + +V + HE T +
Sbjct: 226 LLRMGWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEINTMVSALQHEPTQLAGL 285
Query: 232 CERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
ER+ + L+G C I + + L IV++ DG S R + I +
Sbjct: 286 AERSLMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGT----ESVESERLEEILTPK 341
Query: 291 DAAQY 295
DA ++
Sbjct: 342 DADEF 346
>gi|39940760|ref|XP_359917.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15]
gi|145010915|gb|EDJ95571.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15]
Length = 340
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 20/319 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLA+ T + L H P + ++T+GD+ L +G KG++T
Sbjct: 7 IKIGTRRSPLAIRQVEHTVALLQKAH--PDITFEVNAIATQGDKDKVSPLPSMG-KGMWT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF------ISHTAQSLK 119
E+E L +GE+D VH KDMPT L ++ A + RED RDV + +++
Sbjct: 64 NELEAMLTTGEVDFIVHCLKDMPTTLPDNCELGAVMEREDPRDVVVIKPKHVQAGCKTIA 123
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
DL S++GTSS RR + L RW ++ D+RG I+TRL KL+ + + I+LA AG+
Sbjct: 124 DLPKGSLVGTSSPRRSSQLKRWYPELRFRDYRGNIDTRLRKLDAEDGEFDCIILAAAGLH 183
Query: 178 RLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
R+ + I + L+ + GQGA+ +E + + ++++ + T + E
Sbjct: 184 RMDQHSRIAQYLDSTTEGGGVLHAVGQGALGLEVRKGDIETLKVIECLVDMPTMKAGWAE 243
Query: 234 RAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINI 288
R + L+G C I +G TL V+A DG + + N+ +A +
Sbjct: 244 RTVMRTLEGGCSVPIGVETSWSDEGKTLRLRATVVALDGSEAVDADASASVSNQEEAEAL 303
Query: 289 GRDAAQYIRFISNKNVFNF 307
G+ +Q + K + +
Sbjct: 304 GKQVSQVLVERGAKKILDV 322
>gi|167769475|ref|ZP_02441528.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM
17241]
gi|167668443|gb|EDS12573.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM
17241]
Length = 295
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 147/287 (51%), Gaps = 9/287 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++G+R S LA+ A + ++ V + P + ++ + T GD+I +RTL +IGGKG
Sbjct: 2 KHLKVGSRESRLAVIQA---KLAMDAVREWDPEIELELVAMKTTGDKILDRTLDKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E++ L++G +D VHS KD+P L L ++ + R D RD + + +L
Sbjct: 59 LFVRELDAALLNGMVDFTVHSCKDLPMDLDPRLPLAGFSKRADPRDALV--LPNGVYELD 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IG +S RR L + V RG ++TRL KL++ + A++LA AG+ RL E
Sbjct: 117 PAKPIGCASARRAVQLKKLFPGQPVAPVRGNVQTRLQKLDDGQYAALVLAAAGLVRLGLE 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + ++ P+ GQG + ++ A L + D+ D ERAF+ LDG
Sbjct: 177 DRITRYFSTDEMLPAAGQGILAVQARAGE-NASYLSAFFDR-DSADCALAERAFVRRLDG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGI-VLASDGKIFHEVSRNGNRCDAINI 288
C S A +A +G TL G+ V A +F + ++ +A+ I
Sbjct: 235 GCTSPTAAYATVQGETLTLRGMDVTAKGAPVFDTILGPRSQGEALGI 281
>gi|302662015|ref|XP_003022667.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum
HKI 0517]
gi|291186626|gb|EFE42049.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum
HKI 0517]
Length = 331
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 17/291 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGF-------AYCKGSTLYFYGIVLASDGKIFHEVSRN 279
L L+G C SA G A G L IV + DGK E+ ++
Sbjct: 243 LLRTLEGGC-SAPLGVETEWVPDASGNGEMLRLRCIVTSIDGKEAVEIEKD 292
>gi|302511047|ref|XP_003017475.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS
112371]
gi|291181046|gb|EFE36830.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS
112371]
Length = 331
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 17/291 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGF-------AYCKGSTLYFYGIVLASDGKIFHEVSRN 279
L L+G C SA G A G L IV + DGK E+ ++
Sbjct: 243 LLRTLEGGC-SAPLGVETEWVPNASGNGEMLRLRCIVTSIDGKEAVEIEKD 292
>gi|227502550|ref|ZP_03932599.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725]
gi|227076712|gb|EEI14675.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725]
Length = 295
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 143/285 (50%), Gaps = 10/285 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA A R L+D +IV +T GD TN E G G+FT
Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDAGFDSELHIV----TTAGD--TNMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + + L GE D AVHS KD+PT + + +P R+D R+V ++ +L L
Sbjct: 56 QALREALCRGECDIAVHSFKDLPTA--EDDRFRLVIPQRQDSREVLVARDGMTLMQLPEG 113
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ + RG I+TR++K+ + + A++LAYAG+ R E
Sbjct: 114 ARVGTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDR 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+I + E F P+P QGA+ IE +A + + E + ERA LA L+ C
Sbjct: 174 ASDIFDPELFMPAPAQGALAIEAVAGT-EAAAALDAVVDEQATAAALAERAVLARLEAGC 232
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ +A + G L G V A DG + +G +A +G
Sbjct: 233 TAPVAATSRWNGDQLTVRGGVFALDGSRQLTATASGTAAEAAELG 277
>gi|171185430|ref|YP_001794349.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta]
gi|229846306|sp|B1YDP0|HEM3_THENV RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|170934642|gb|ACB39903.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta]
Length = 296
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 144/308 (46%), Gaps = 38/308 (12%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L +T L + + P I+ + T GD I ++ L +IG KG+F
Sbjct: 3 IRVATRGSKLSL---IQTEELLAQIKAVEPDIRFEIVVVKTTGDLIQDKPLFQIGVKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D AVHS KD+P+ L GL ++ Y R D +S +L+ L
Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSDLTPGLALAGYSRRAPPNDALVSPRGYTLETLPRG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKE 182
+V+GTSS+RR L R D+ + RG ++TR+ K+ + + A ++A AG++RL
Sbjct: 120 AVVGTSSVRRAEFLKAARPDLEIKPLRGNVDTRVAKILSGQYDAAVMAAAGLQRLYGGAP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA------- 235
+ L +ED PP PGQG + V EDTW + RA
Sbjct: 180 PIPAVPLAVEDLPPPPGQGIVA--------------AVAREEDTWLTDLLRRASDRKAAA 225
Query: 236 -------FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
FLAE+ C A+ G A + + F + G H V G D +
Sbjct: 226 EAAAERAFLAEVGAGCHVAVGGIARQTPAGIEFTAGY--AQGGRKHLVKVYGE--DPTEV 281
Query: 289 GRDAAQYI 296
GR AA+ +
Sbjct: 282 GRRAARLV 289
>gi|149240385|ref|XP_001526068.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239]
gi|146450191|gb|EDK44447.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239]
Length = 347
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 164/319 (51%), Gaps = 24/319 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG R S LA+ + + ++ ++ P +I + LST GD++ + L GGK L+T
Sbjct: 20 LQIGGRKSKLAVVQSQLVQQAIQKIYPDLPSSI--LALSTLGDKVQTQPLYTFGGKSLWT 77
Query: 66 EEIEKKLISG------EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116
+E+E L+ G +D VHS KDMPT L + ++ RED RD + +
Sbjct: 78 KELEILLMDGIDDEFPRLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSPYK 137
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174
L+DL S++GTSS+RR + L++ + RG I+TRLNKL++ N ++LA A
Sbjct: 138 YLRDLPAGSIVGTSSIRRSSQLIKNYPHLKFESVRGNIQTRLNKLDDPSNPYCCLILASA 197
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC-- 232
G+ RL I L+ + + GQGA+ IE ++ + +E++K I ED ++ C
Sbjct: 198 GLIRLGLGGRITSCLDEVYY--AVGQGALGIEIRKDDHQVKEILKKI--EDPVATICCLA 253
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDG--KIFHEVSRN-GNRCDAIN 287
ER+ + L+G C + + ST L GI+++ DG I EV++ +R D
Sbjct: 254 ERSLMRYLEGGCSVPLGVHSEYNESTKKLTLKGIIVSPDGSKSIEDEVTKTIESREDCEA 313
Query: 288 IGRDAAQYIRFISNKNVFN 306
+G D ++ K + +
Sbjct: 314 VGIDLGDRLKAKGAKEILD 332
>gi|302205429|gb|ADL09771.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis C231]
gi|308275667|gb|ADO25566.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis I19]
Length = 296
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 9/289 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F IGTR S LA + R +L+ +IV P GD N E G G+FT
Sbjct: 3 FTIGTRGSLLATTQSGHVRDALISQGYSAELSIVTTP----GD--VNMAPVERIGVGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + L+ G D AVHS KD+PT+ + + +P R D RD ++ +L +L
Sbjct: 57 QALRDVLVKGGCDIAVHSFKDLPTQ--RDPRFHLIVPERADARDCLVARDGLTLAELPQG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C
Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ +A + L G V++ DG + G +A+ IG A
Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVFRATMTGGLSEAVAIGEKVA 283
>gi|16611929|gb|AAL27412.1|AF429957_3 porphobilinogen deaminase [uncultured bacterium]
Length = 299
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 138/259 (53%), Gaps = 25/259 (9%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+ TR S LAL A L+ + ++ + T+GDR R ++ G+G FT+
Sbjct: 5 RLATRGSRLALWQAEWVAKQLVQQGA----EVELVVVETQGDR-EKRPFAQMQGQGFFTK 59
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF------ISHTAQSLKD 120
+++ ++ G D AVHS KD+P+ GL+I+A PRED R++ + A L
Sbjct: 60 AVQEAVLEGRADFAVHSYKDLPSARPAGLEIAAVPPREDPRELLLVRLQAVDQVAPGLP- 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+S+ RR+A L R D+S+++ RG + TR+ KL + A+LLAYAG++RL
Sbjct: 119 LRAGARVGSSAARRQAQLAHLRPDLSLLELRGNVLTRVEKLRQGEYDAVLLAYAGVRRLG 178
Query: 181 KE------KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+ +V+ L + P+P QGA+ +E ++ + + L++ ++ D V C
Sbjct: 179 LDLSPFHWQVLPPTLLV----PAPAQGALALECRQDDKRLRPLLEPLD--DPSAGVRCGG 232
Query: 235 A-FLAELDGSCKSAIAGFA 252
A +A L G C+ A+ A
Sbjct: 233 AGLMARLAGGCQLALGALA 251
>gi|45185123|ref|NP_982840.1| ABL107Cp [Ashbya gossypii ATCC 10895]
gi|55976464|sp|Q75DY0|HEM3_ASHGO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|44980759|gb|AAS50664.1| ABL107Cp [Ashbya gossypii ATCC 10895]
Length = 326
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI R S LA+ + + + + P + ++ T GD++ ++ L GG
Sbjct: 1 MGEETLRIAGRRSKLAVIQSESVKEIVQ--REFPNYTCTVLAKQTLGDQVQSKPLYAFGG 58
Query: 61 KGLFTEEIEKKL----ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115
K L+T+E+E L + ID VHS KDMPT+L +G ++ A R D D +
Sbjct: 59 KALWTKELEDLLYEEDLDQRIDMIVHSLKDMPTQLPEGFELGAITKRVDPSDCLVMAAGS 118
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
++L DL SV+GTSS+RR A L R + RG I+TRL KL++ N+ I+L
Sbjct: 119 PYKTLGDLPNGSVVGTSSIRRSAQLRRRYPHLVFASVRGNIQTRLKKLDDPENECKCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ RL E I + + + GQGA+ IET + + Q ++ + ++
Sbjct: 179 ATAGLVRLGLESRITQRFDSTIMLHAVGQGALGIETRTGDERLQAILAKVADRNSTICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRN----GNRCDA 285
ER+ + L+G C I ++ + S L G+V++ DG E + + ++ DA
Sbjct: 239 AERSLMRTLEGGCSVPIGVYSTFDEETSMLTLDGLVVSVDGADAAEATVSYKIKSDKEDA 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
I G+ A + K + +
Sbjct: 299 IACGQLLAAKLLEAGAKKILD 319
>gi|255725590|ref|XP_002547724.1| porphobilinogen deaminase [Candida tropicalis MYA-3404]
gi|240135615|gb|EER35169.1| porphobilinogen deaminase [Candida tropicalis MYA-3404]
Length = 340
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 150/284 (52%), Gaps = 20/284 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T
Sbjct: 14 VQIGGRKSKLAVVQSELVKKAIEDT--FPNLSCSILALSTLGDKVQTQPLYTFGGKSLWT 71
Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
+E+E L+ ++D VHS KDMPT L + ++ RED RD + + +S
Sbjct: 72 KELEILLLDSIDEYPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAVVMKSGSPYKS 131
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
LKDL +++GTSS+RR + L++ + RG I+TRLNKL+ +N+ ++LA AG
Sbjct: 132 LKDLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPDNEYCCLILASAG 191
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--E 233
+ RL I L +D + GQGA+ IE + K + +++ I ED +V C E
Sbjct: 192 LIRLGLGDRITSFL--DDMYYAVGQGALGIEIRRGDDKVKPILQKI--EDPIATVCCLAE 247
Query: 234 RAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHE 275
R+ + L+G C + + T L GI+++ DG ++ E
Sbjct: 248 RSLMRYLEGGCSVPLGVNSNYNEDTQELTLKGIIVSPDGSVWIE 291
>gi|134055399|emb|CAK43953.1| unnamed protein product [Aspergillus niger]
Length = 346
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 135/284 (47%), Gaps = 20/284 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVH---KIPPHNIVIIPLSTKGDRITNRTLTEIGG-- 60
R+GTR S LAL A L H + P +V+ +GD + + G
Sbjct: 12 LRLGTRNSKLALVQAEHVSKELTSAHPGVQFPWQTVVV-----RGDADKSSPFLKFAGPS 66
Query: 61 ---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-- 115
K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D +
Sbjct: 67 DAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDALVIKEGLR 126
Query: 116 ---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAIL 170
L L SV+GTSS RRKALL + V + RG + TRL KL++ + AI+
Sbjct: 127 SQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDPEGPFSAII 186
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I T
Sbjct: 187 LATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIEDLVTRRIC 246
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274
ER+ L L G C S +A + + L DG I H
Sbjct: 247 LAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDGTIIH 290
>gi|312216693|emb|CBX96643.1| hypothetical protein [Leptosphaeria maculans]
Length = 398
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 132/277 (47%), Gaps = 14/277 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60
P IGTR S LA A SL + H P I P+ +GDR L ++
Sbjct: 30 PINIGTRNSVLAQIQARAVERSLKEAH--PERTYNICPVVVQGDRDKTTPLQQLSRGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQ 116
K L+T E+E L SGE+D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGELDLIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
+L L + IGTSS+RR A L + + D RG + TRL KL+ ++ AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRSATLRKLFPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE + + L+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKGDESTKALLSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
ERA L L+G C I +G G A D
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWRGGRGLTTGAQPARD 304
>gi|325954067|ref|YP_004237727.1| porphobilinogen deaminase [Weeksella virosa DSM 16922]
gi|323436685|gb|ADX67149.1| porphobilinogen deaminase [Weeksella virosa DSM 16922]
Length = 306
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR SPLAL A + + L I IIP+ ++GD + + +G G+
Sbjct: 2 KKIRIGTRQSPLALWQANKVAALLSK----KGCEIEIIPIKSEGDLNLKQPIYSLGITGV 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L++ +ID AVHS KD+PT L +GL + A+ R + D+ + +
Sbjct: 58 FTKSLDIALLNNKIDIAVHSLKDVPTVLPEGLALKAFPERANSSDILVYKSNDIFT--KT 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR----- 178
H I T SLRR+A L + +++D RG ++ RL KL +N + A AG+ R
Sbjct: 116 HRTIATGSLRRRAFWLHRYPEDTLVDLRGNVQLRLQKLQDNDWDGAIFAMAGLDRSEIIA 175
Query: 179 -LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
L+ K+ ++ PS G + + P IN+E+ ER FL
Sbjct: 176 DLENRKLHYSTIDWMLAAPSQGILGVVAREDFDFPS-------INNEECELYATVERQFL 228
Query: 238 AELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L+G C + I + +Y F G +L+ DGK EV NR + GR A+
Sbjct: 229 NVLEGGCTAPIGALVSPLSADMYRFQGTILSLDGKEKIEVVDQFNRSEYKEFGRKMAE 286
>gi|297516477|ref|ZP_06934863.1| porphobilinogen deaminase [Escherichia coli OP50]
Length = 221
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 103/187 (55%)
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ +L L S++GTSSLRR+ L R D+ + RG + TRL+KL+
Sbjct: 9 REDPRDAFVSNNYDNLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD 68
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ +N
Sbjct: 69 NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALN 128
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H +T V ERA L+G C+ I +A ++ +V A DG R G
Sbjct: 129 HHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAP 188
Query: 283 CDAINIG 289
DA +G
Sbjct: 189 QDAEQMG 195
>gi|124485351|ref|YP_001029967.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit
[Methanocorpusculum labreanum Z]
gi|124362892|gb|ABN06700.1| uroporphyrin-III C-methyltransferase [Methanocorpusculum labreanum
Z]
Length = 542
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 140/252 (55%), Gaps = 20/252 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA + L+ + I ++I T GD++T+R L +IGG G+F
Sbjct: 4 IRIGTRGSKLALAQTKKV-IGLLAENGIDAEYVII---KTTGDKVTDRGLHQIGGFGMFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ ++ GEIDCAVHS KD+P + KGL A L R+ D + + ++DL
Sbjct: 60 RELDNAILRGEIDCAVHSMKDIPAERPKGLLTVAVLKRDPPYDFLVMNG--KVEDLM--- 114
Query: 126 VIGTSSLRRKALLLRWRSD---ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181
VIGTSSLRRKA LLR+ + + V RG ++TRL KL++ I++A AG+ RL K
Sbjct: 115 VIGTSSLRRKAQLLRYFHNCPAVRVEMLRGNLDTRLGKLDDGLYDGIMVAEAGLMRLDYK 174
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--ERAFLAE 239
++ L+ + F P+ QG I I + + P+ + +N D +++C ER + +
Sbjct: 175 RNGVR--LSPDMFVPAANQGTIAIVSR-DTPELRAAFAPLN--DPQSALDCAIERIVMEQ 229
Query: 240 LDGSCKSAIAGF 251
+ G C + + F
Sbjct: 230 VGGGCFTPMGIF 241
>gi|50305837|ref|XP_452879.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|55976379|sp|Q6CT60|HEM3_KLULA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49642012|emb|CAH01730.1| KLLA0C15147p [Kluyveromyces lactis]
Length = 327
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 16/318 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RIG R S LA+ + + + +M K ++ + T GD++ ++ L GGK
Sbjct: 4 KETVRIGGRRSKLAVVQSEQVK--VMIESKFSHIECPLLSVHTLGDQVQSKPLYSFGGKA 61
Query: 63 LFTEEIEKKLISGE---IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF---ISHTAQ 116
++T+E+E L + ID VHS KDMPT L G ++ R D D I
Sbjct: 62 VWTKELEDLLYKDDESRIDLIVHSLKDMPTLLPDGFELGGITKRVDPTDALVMPIGSPYS 121
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174
SL +L SV+GTSS+RR A L R ++ RG I+TRL KL++ + I+LA A
Sbjct: 122 SLSELPDGSVVGTSSVRRSAQLKRKFPNLKFESIRGNIQTRLAKLDDPETPYKCIVLASA 181
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R + I + N + + GQGA+ IE ++ K ++++K I T ER
Sbjct: 182 GLMRSGLDSRITQRFNADTMCYAVGQGALGIEIRKDDEKMKKILKEICDPSTTICCLAER 241
Query: 235 AFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDG----KIFHEVSRNGNRCDAINI 288
+ L L+G C I + ST L GIV+ +G +I H+V+ + R D+IN
Sbjct: 242 SLLRTLEGGCSVPIGVVSNYDESTKVLTLKGIVINVEGTEWVEIEHKVTISNEREDSINC 301
Query: 289 GRDAAQYIRFISNKNVFN 306
G++ A + K + +
Sbjct: 302 GKELAAKLTQNGAKEILD 319
>gi|182415288|ref|YP_001820354.1| porphobilinogen deaminase [Opitutus terrae PB90-1]
gi|177842502|gb|ACB76754.1| porphobilinogen deaminase [Opitutus terrae PB90-1]
Length = 284
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 130/265 (49%), Gaps = 21/265 (7%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGK 61
K + TR SPLAL ++ ++ H + ++ L T GDR T +L + GGK
Sbjct: 2 KKLILATRKSPLAL-----RQTEMVAAHLEARLGVQTELLKLVTTGDRQTEWSLEQKGGK 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT E+E L GE D AVHS KD+P + L ++ YLPR D RDV + +
Sbjct: 57 GLFTSELENALRRGEADLAVHSTKDLPGDMAAELAVAGYLPRADARDVLVLRAG-----V 111
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL- 179
A + T S RR+ + + ++ + RG ++TRL K+ A +LA AG+ RL
Sbjct: 112 AAPKSLATGSPRRRLQIAKLYPGVTFTEIRGNVDTRLKKIGELGVADGTVLASAGLNRLG 171
Query: 180 --KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
V L D P+ GQGAI ++ + A V + T +V+ ERAF
Sbjct: 172 IGNWPGVEFHALGFNDMVPAVGQGAIAVQCRAAD--AARFAPVFDAA-TKRAVDVERAFQ 228
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFY 262
A L C++A A+ G TL+F+
Sbjct: 229 AALGVGCQTAFG--AHVAGDTLHFF 251
>gi|300857688|ref|YP_003782671.1| porphobilinogen deaminase [Corynebacterium pseudotuberculosis
FRC41]
gi|300685142|gb|ADK28064.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis
FRC41]
gi|302329983|gb|ADL20177.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis 1002]
Length = 296
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 9/289 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F IGTR S LA + R +L+ +IV P GD N E G G+FT
Sbjct: 3 FTIGTRGSLLATTQSGHVRDALISQGYSAELSIVTTP----GD--VNMAPVERIGVGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
+ + L+ G D AVHS KD+PT+ + + +P R D RD ++ +L +L
Sbjct: 57 QALRDVLVKGGCDIAVHSFKDLPTQ--RDPRFHLIVPERADARDCLVARDGLTLAELPQG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C
Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
+ +A + L G V++ DG + G +A+ IG A
Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVLRATMTGGLSEAVAIGEKVA 283
>gi|281348599|gb|EFB24183.1| hypothetical protein PANDA_019874 [Ailuropoda melanoleuca]
Length = 298
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 118/224 (52%), Gaps = 10/224 (4%)
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
+IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 1 QIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKF 60
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLA 172
++L+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA
Sbjct: 61 VGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILA 120
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG++R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T
Sbjct: 121 AAGLQRMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIA 180
Query: 233 ERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDG 270
ERAFL L+G C +A K G LY G V + DG
Sbjct: 181 ERAFLRHLEGGCSVPVAVHTAMKDGQASRGRWLYLTGGVWSLDG 224
>gi|207109051|ref|ZP_03243213.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_CA4C1]
Length = 242
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 131/241 (54%), Gaps = 5/241 (2%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E+E
Sbjct: 1 SRGSELALWQANHIKERLKKECFIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKELE 57
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +GT
Sbjct: 58 ELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGT 117
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IKEI 188
+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + ++
Sbjct: 118 TSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYRKA 177
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
++E+ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+ I
Sbjct: 178 FSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEKSAFCCRLEREFIKGLNGGCQIPI 236
Query: 249 A 249
Sbjct: 237 G 237
>gi|28202885|gb|AAO35329.1| porphobilinogen deaminase [Clostridium tetani E88]
Length = 218
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 2/193 (1%)
Query: 80 AVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLL 139
AVHS KD+P ++ I A RED+RD F+S +L S IGTSS RR + +
Sbjct: 2 AVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSGSKIGTSSRRRSSQIK 61
Query: 140 RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPG 199
R D+ V+ RG ++TRL K+ +LA AG+KRL E+VI + + E+ P+ G
Sbjct: 62 ILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEVITDYFSPEEMVPAIG 121
Query: 200 QGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259
QGA+ IE + +K I+HE+T V ER+F+ L G C S I A + +
Sbjct: 122 QGALGIEIK-KYEDVIDYIKGIDHEETRICVEGERSFMEALKGDCHSTIGAHAIVENDLM 180
Query: 260 YFYGIVLASDGKI 272
Y GI +GKI
Sbjct: 181 YMTGI-FEVNGKI 192
>gi|327311850|ref|YP_004338747.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20]
gi|326948329|gb|AEA13435.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20]
Length = 303
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 6/268 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L +T + + ++ P I+ + T GD + +R L IG KG+F
Sbjct: 3 LRVATRGSKLSL---LQTELFIKSIKEVEPDLEFEIVVVKTTGDLVQDRPLYAIGVKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ G+ D AVHS KD+P+++ + L ++ Y R+ D S + L
Sbjct: 60 EKEVNLAVLRGQADVAVHSLKDLPSEIHEDLVVAGYSKRDSPYDAIASTRGYDVWGLPRG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS+RR A L R D+ + RG ++TR+ K+ + A +LA AG++RL E
Sbjct: 120 ARVGTSSVRRGAFLKSIRPDLHIEPLRGNVDTRIGKVLSGAVDAAVLAEAGVRRLYGENP 179
Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
EI + ++ PP PGQG + ++ +L++ + ERAFL E+ G
Sbjct: 180 PVEIRRVKPDEIPPPPGQGIVAAVARKDDRGIIDLLRKASDPRAALEARAERAFLKEMGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C A+ G A + + F + DG
Sbjct: 240 GCHVAVGGLATATPNGIEFLAGWASVDG 267
>gi|123210216|emb|CAM15096.1| hydroxymethylbilane synthase [Danio rerio]
Length = 247
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 125/225 (55%), Gaps = 6/225 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K LFT
Sbjct: 22 IRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 79
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L L
Sbjct: 80 KELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDSLP 139
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181
SVIGTSSLRR A L + + + RG + TRL KL+ + AI+LA AG+KR+
Sbjct: 140 EKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRMGW 199
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
E I ++L ED + GQGA+ +E + E+V V++H DT
Sbjct: 200 ESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDT 244
>gi|170044628|ref|XP_001849943.1| porphobilinogen deaminase [Culex quinquefasciatus]
gi|167867697|gb|EDS31080.1| porphobilinogen deaminase [Culex quinquefasciatus]
Length = 474
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 121/218 (55%), Gaps = 12/218 (5%)
Query: 21 FETRSSLMDVH---KIPPHNIVII----PLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73
+E R VH +P + + ++T GDR+ N++L +IG K LFT+++E L
Sbjct: 190 YEIRKYFQHVHLCWHVPSYLLAFFLSPDTMTTVGDRVLNKSLPKIGEKSLFTKDLEDALR 249
Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTS 130
+G +D VHS KD+PT L G+ I A L R+D RD + +H ++L L SV+GTS
Sbjct: 250 TGGVDFVVHSLKDLPTALPLGMAIGAVLERDDPRDALVLNEAHRGRTLSTLPKGSVVGTS 309
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKEKVIKEI 188
SLRR A L R ++ V D RG + TRL KL + +K I+LA AG+ R+ + ++
Sbjct: 310 SLRRSAQLARKYENVVVCDIRGNLNTRLAKLDADGSKFAGIILAQAGLVRMGWNARVSQV 369
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
+ + + GQGA+ +E N+ +++ + H +T
Sbjct: 370 IEPGEILYAVGQGALAVECRSNDEYILDMLSKLCHLET 407
>gi|150398808|ref|YP_001322575.1| porphobilinogen deaminase [Methanococcus vannielii SB]
gi|150011511|gb|ABR53963.1| porphobilinogen deaminase [Methanococcus vannielii SB]
Length = 304
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 20/255 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ + +SL++ + II + T GD+ N+ L ++G G+FT
Sbjct: 3 LRIGTRGSKLAMIQT-KYIASLLNELGVETE---IIIIKTTGDKDQNKKLADLG-IGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ K++ EID AVHS KD+PT LQI+A RE D+ + + +
Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDLILWNKNSNFNIEYDEL 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS+RR A L ++ V RG + TR++KL NN+ I++A AG+ I
Sbjct: 118 IVGTSSIRRTAFLELSNPNLKVKLLRGNVATRIDKLRNNEYDGIIMAKAGL--------I 169
Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ +++ DF P+P QG I + + + + E+++ IN + T+ ER L
Sbjct: 170 RQGIDLSDFNYEKLEILPAPAQGVIGVASRKKDYEINEILEKINDKKTYLEAVAERWSLK 229
Query: 239 ELDGSCKSAIAGFAY 253
E G C++ FA+
Sbjct: 230 EYGGGCQAPFGAFAF 244
>gi|115523326|ref|YP_780237.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisA53]
gi|115517273|gb|ABJ05257.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisA53]
Length = 326
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 32/313 (10%)
Query: 5 PFRIGTRCSPLALAHA------FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
P RIGTR S +ALA +S +DV I+ T GD L
Sbjct: 4 PVRIGTRKSVMALAQTEDIARRLSAAASELDVE--------IVKFETVGDSDQVSKLLPH 55
Query: 59 GGKG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQ 116
GGKG F EI +I+G+++ +HS KDMP + GL I A L R+ D +
Sbjct: 56 GGKGGAFVAEIRAAVIAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPATDALVLRKGL 115
Query: 117 SLKDL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------- 165
+L +L IGT+++RR A R ++++I FRG +TR+ KL+N +
Sbjct: 116 TLDELKKSRGKGYTIGTNAVRRAAYAKRLFPEVNIIHFRGAADTRIRKLDNGEMQRLPGG 175
Query: 166 -----AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
A A+++A +G++R+ I ++ PS GQG + +E +N+ + ++ + +
Sbjct: 176 GEVGPADALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAINDWQIRKYLAM 235
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
I+ S + ER L L+G C S +A F+ GS + VL G +F E SR+G
Sbjct: 236 IDDPVARLSCDAEREVLWVLNGHCNSPMAAFSTINGSDMTLSASVLDETGGLFIEASRSG 295
Query: 281 NRCDAINIGRDAA 293
+GR A
Sbjct: 296 PANRPRELGRAVA 308
>gi|145525120|ref|XP_001448382.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415926|emb|CAK80985.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 12/273 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGK 61
++ RI TR S LA+A S L II +S + GD L ++
Sbjct: 2 QRQLRIATRSSALAMAQTNYVISEL-------KQECEIIKVSNEVGDVNLQDPLYQMPTV 54
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +SL
Sbjct: 55 GVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLHLAAYTKFEQRGDVVLLNKKYNYKSL 114
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L +GTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI R
Sbjct: 115 SELPDGLKVGTSSLRRIATIRSRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGILR 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I L+ ++F +P Q A+ I+ ++ + ++++N D ER FL
Sbjct: 175 LGLAEKISFDLDEKEFLYAPAQAALGIQCRKDDLETIGRLQILNDTDAQKRCVAERMFLN 234
Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDG 270
L+G C+ IA ++ C+ +Y G VLA DG
Sbjct: 235 LLEGGCRLPIAVYSECREDGQVYIKGRVLAVDG 267
>gi|213406619|ref|XP_002174081.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275]
gi|212002128|gb|EEB07788.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275]
Length = 335
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 150/307 (48%), Gaps = 24/307 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GKG 62
F +G+R S LAL L +++ P +N I+ T GD I N+ L E K
Sbjct: 11 FPLGSRKSKLALIQTNLVLKQLKELY--PEYNFPILSRDTVGDEIINKALFEFKTQMAKS 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T E+E L+ GE VHS KD+PT L +G+ I+ R D + +S+
Sbjct: 69 LWTRELEVLLMHGECRMLVHSLKDLPTDLPEGMTIACITRRSCPLDAVVMRAGSPYKSVS 128
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L +SV+GTSS+RR+A+L R + D RG + TRL KL+ ++ ++LA AG+
Sbjct: 129 ELPPNSVVGTSSIRRRAMLQRHFPHLKFRDIRGNVGTRLAKLDAPDSPFDCLILAAAGLI 188
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + I ++L + GQGA+ +E ++ + EL+K + +T S ERA +
Sbjct: 189 RLNLKDRITQMLQAPFVFYAVGQGALAVEVRADDTEIIELLKPLQDMETTYSCLAERALM 248
Query: 238 AELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDG------KIFHEVSRNGNRCDAI 286
L G C I C ++ G+V++SDG F EVS DA
Sbjct: 249 KRLQGGCAIPIGVETQCLPLSKDKYSVVLQGMVVSSDGTRSAYASEFMEVSSEK---DAE 305
Query: 287 NIGRDAA 293
+G + A
Sbjct: 306 QLGMNVA 312
>gi|256088596|ref|XP_002580415.1| hydroxymethylbilane synthase; porphobilinogen deaminase
[Schistosoma mansoni]
gi|238665988|emb|CAZ36654.1| hydroxymethylbilane synthase [Schistosoma mansoni]
Length = 411
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 136/262 (51%), Gaps = 23/262 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LAL +T ++ + K PH + ++ ++T GD+I + +L++IG K LF
Sbjct: 10 VRVGSRRSNLAL---LQTGMAVNLLQKQNPHILFEVVEMATVGDKILDVSLSKIGDKSLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDL 121
T+E+E L+SGE+D VHS KD+P+ L GL + R DV + + + L DL
Sbjct: 67 TKELENALLSGEVDLVVHSLKDVPSTLPSGLVLGCVFARVSPEDVVLMAPHYRGRKLSDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-------------- 167
+ S +GTS++RR A L R + + RG + TRL KL+ A
Sbjct: 127 PIGSTVGTSAVRRVATLTRKYPHLKFVSIRGNLNTRLAKLDTPPASKDNCCSGNPSPSYD 186
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
AI+LA AG++R+ I ++L + S QGA+ E + + +L+ I+ E
Sbjct: 187 AIILAKAGVERMGWSHRIDQVLTDSFYAVS--QGALACECRLVDNFIMDLLSHIHDESAA 244
Query: 228 DSVNCERAFLAELDGSCKSAIA 249
+ ER+ + +LDG C I
Sbjct: 245 LTTIAERSLMRQLDGGCSIPIG 266
>gi|146419731|ref|XP_001485826.1| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC
6260]
Length = 371
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 18/286 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +IG R LA+A + + L V K P I+ LST GD+I ++ L GGK L
Sbjct: 10 KHIQIGGRKLTLAVAQSNIVKKHL--VAKFPQLKCSILALSTLGDQIQSQPLYLFGGKAL 67
Query: 64 FTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--- 115
+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV +
Sbjct: 68 WTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRLDPRDVLVMRKGSKY 127
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+SL +L +++GTSS+RR + L++ + RG I TR+ KL+ ++ +LLA
Sbjct: 128 KSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLLAA 187
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC- 232
AG++R+ + I L+ D + GQGA+ +E + + ++L++ I ED S+ C
Sbjct: 188 AGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAI--EDVPTSLCCH 245
Query: 233 -ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHE 275
ER+ + L+G C I +T L F IV++ DG F E
Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVE 291
>gi|294054671|ref|YP_003548329.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221]
gi|293614004|gb|ADE54159.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221]
Length = 284
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 134/260 (51%), Gaps = 18/260 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLAL R+ L + K+P + + L+T+ D + +L + GG GLFT+E
Sbjct: 5 IATRKSPLALKQTEMVRAWLAE--KLPNDHYEELQLTTQVDERLSWSLEKRGGIGLFTKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E+ L++ + AVHSAKDMPT L I+ YLPR DV + + ++ I
Sbjct: 63 LEEALLANKATLAVHSAKDMPTTFQDDLCIAGYLPRARANDVIVKRS-----EIESPKRI 117
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLKKEKV-- 184
TSS RR+A L +D RG + TRL K+ +A A LLA AG+ RL +
Sbjct: 118 ATSSPRRRAQLALLNNDAEWTTLRGNVGTRLRKIAEAQEADATLLAAAGLNRLDIQSYDG 177
Query: 185 IKEI-LNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I L IE P+PGQ AI I+ + K Q+L EDT +V ER FL L G
Sbjct: 178 LDFIELPIEQMVPAPGQAAIAIQCREKDLEKYQDLF----CEDTKLAVTLEREFLHRLGG 233
Query: 243 SCKSAIAGFAYCKGSTLYFY 262
C++ + A+ G+ Y
Sbjct: 234 GCQTPVG--AHYNGTVFSIY 251
>gi|319949783|ref|ZP_08023807.1| porphobilinogen deaminase [Dietzia cinnamea P4]
gi|319436542|gb|EFV91638.1| porphobilinogen deaminase [Dietzia cinnamea P4]
Length = 354
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + ++GTR S LA A R +L+ P +VI+ T+GD + E G
Sbjct: 1 MSSRTLKVGTRGSTLATTQAGHVRDALIAAGY--PAELVIV--RTRGDVVM--APVERIG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT E+ L G+ D AVHS KD+PT A PR D DV I+ +++
Sbjct: 55 VGVFTLELRAALERGDCDIAVHSYKDLPTARDDRFAPIAVPPRVDPSDVLIARDGLTMET 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+ RR++ L R D+ + RG I+TR+ + + A++LA AG+ R
Sbjct: 115 LPQGARVGTSAPRRRSQLAALRPDLDLHPLRGNIDTRMGYVTSGDLDAVVLAAAGLDRTG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++ P+P QGA+ +E ++ +A + V++H + + ER L +L
Sbjct: 175 AGERATHRFGIDEMLPAPAQGALAVEARADDTEAIAALAVVDHLPSRVRIAAERTLLRDL 234
Query: 241 DGSCKSAIAGFAYCKGS 257
+ C + + A G+
Sbjct: 235 EAGCTAPVGARAELSGT 251
>gi|145476419|ref|XP_001424232.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391295|emb|CAK56834.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 141/273 (51%), Gaps = 12/273 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGK 61
+K RI TR S LA+A L II +S + GD L ++
Sbjct: 2 QKQIRIATRSSALAMAQTNYVIGEL-------KQEFEIIKVSNEVGDVNLQDPLYQMPTV 54
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +SL
Sbjct: 55 GVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLYLAAYTKFEQRGDVVLLNNKYNYKSL 114
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L IGTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI R
Sbjct: 115 SELPEGFKIGTSSLRRIATIKNRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGILR 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I L ++F +P Q A+ I+ ++ + ++++N D+ ER FL
Sbjct: 175 LGLSERISFDLEEKEFLYAPAQAALGIQCRKDDLQTIARLQILNDIDSQKRCVAERMFLN 234
Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDG 270
L+G C+ IA ++ C+ +Y G V+A DG
Sbjct: 235 LLEGGCRLPIAVYSECREDGQVYIKGRVMAVDG 267
>gi|320587748|gb|EFX00223.1| porphobilinogen deaminase [Grosmannia clavigera kw1407]
Length = 342
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 139/285 (48%), Gaps = 24/285 (8%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+GTR S LAL A ++L K PH V+ T GDR L +G KGL+T
Sbjct: 9 VGTRSSALALKQAELVVAAL---EKANPHVKFVVDARETAGDRDKVTPLPNLG-KGLWTT 64
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKDLAL 123
E E +L+ G++D VHSAKDMPT L G + A RED RD I + L DL +
Sbjct: 65 EFETRLVDGDLDLVVHSAKDMPTTLPVGCLLGAIPKREDPRDAVIFPPGSAYKVLADLPV 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------NNKAHAILLAYA 174
S++GTSS+RR A L R + D RG I+TRL KL+ + I+LA A
Sbjct: 125 GSIVGTSSVRRSAQLRRRFPGLEFRDLRGNIDTRLRKLDAPVPGPDGTTVRYDCIILAAA 184
Query: 175 GIKRLKKEKVIKEILNIEDFPP--SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+ R+ I ++L+ + GQGA+ +E + K L++ I + T +
Sbjct: 185 GLIRMGFNDRISQLLDSASSGTLYAVGQGAMAVEIRNGDAKTLALLEPIIDKPTMLACLA 244
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKI 272
ERA + L+G C I + + T L +++ DGKI
Sbjct: 245 ERAVMRALEGGCSVPIGVESAWEAETAASPRLKLQATIVSLDGKI 289
>gi|317026261|ref|XP_001389286.2| porphobilinogen deaminase [Aspergillus niger CBS 513.88]
Length = 329
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 20/259 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVH---KIPPHNIVIIPLSTKGDRITNRTLTEIGG-- 60
R+GTR S LAL A L H + P +V+ +GD + + G
Sbjct: 12 LRLGTRNSKLALVQAEHVSKELTSAHPGVQFPWQTVVV-----RGDADKSSPFLKFAGPS 66
Query: 61 ---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-- 115
K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D +
Sbjct: 67 DAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDALVIKEGLR 126
Query: 116 ---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAIL 170
L L SV+GTSS RRKALL + V + RG + TRL KL++ + AI+
Sbjct: 127 SQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDPEGPFSAII 186
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I T
Sbjct: 187 LATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIEDLVTRRIC 246
Query: 231 NCERAFLAELDGSCKSAIA 249
ER+ L L G C S +A
Sbjct: 247 LAERSLLRTLQGGCSSPVA 265
>gi|241952386|ref|XP_002418915.1| hydroxymethylbilan synthase, putative; porphobilinogen deaminase,
putative; pre-uroporphyrinogen synthase, putative
[Candida dubliniensis CD36]
gi|223642254|emb|CAX44222.1| hydroxymethylbilan synthase, putative [Candida dubliniensis CD36]
Length = 340
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 20/281 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T
Sbjct: 14 VQIGGRKSKLAVVQSEIVKKAIEDT--FPNLSCSILALSTLGDKVQTQPLYTFGGKSLWT 71
Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
+E+E L+ ++D VHS KDMPT L + ++ RED RD + + +S
Sbjct: 72 KELEILLLDSVDEFPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKS 131
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
LKDL +++GTSS+RR + L++ + RG I+TRLNKL+ NN+ ++LA AG
Sbjct: 132 LKDLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAG 191
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--E 233
+ RL I L+ D + GQGA+ IE + + ++K I ED ++ C E
Sbjct: 192 LIRLGLGHRITSYLD--DMYYAVGQGALGIEIRKGDDNIKSILKKI--EDPIATICCLAE 247
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKI 272
R+ + L+G C + + S L GI+++ DG +
Sbjct: 248 RSLMRYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTV 288
>gi|169614115|ref|XP_001800474.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15]
gi|111061407|gb|EAT82527.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15]
Length = 397
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 131/277 (47%), Gaps = 14/277 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60
P IGTR S LA A ++L H P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSTLAQIQARAVAAALKSAH--PERTYNICPVVVEGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----Q 116
K L+T E+E L G++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELETMLEKGDLDIIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPGDT 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174
+L L + IGTSS+RR A L R + D RG + TRL KL+ + AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRAAQLRRLYPHLQFADLRGNVGTRLGKLDKEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G++R+ E I + L+ + GQGA+ IE ++ + L+ I E T + +
Sbjct: 208 GLRRMGLESRITQYLDSATGGMLHAVGQGALAIEIRKDDETMKALLNKIACERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
ERA L L+G C I +G G A D
Sbjct: 268 ERALLRALEGGCSVPIGIETSWRGGKGLAVGAQPAKD 304
>gi|303244099|ref|ZP_07330437.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1]
gi|302485484|gb|EFL48410.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1]
Length = 311
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 21/274 (7%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LALA + ++ L ++++ ++ II T GD+ L+E+G G+FT+E
Sbjct: 5 IGTRGSKLALAQTYYIKNLLENLNENLSIDVKII--KTTGDKNQKSKLSELG-LGVFTKE 61
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ K+++ EID AVHS KD+PT + L ISA RE D+ I + + + ++
Sbjct: 62 LDTKMLNNEIDIAVHSLKDVPTVWNENLTISATPKRESYHDLIIWNKNNDIDIEKDNLIV 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSS+RRKA L ++ RG I+TRL KL N AI+LA AG+ RLK
Sbjct: 122 GTSSIRRKAFLSIKYPNLKTKLLRGNIDTRLRKLRENNYDAIILAEAGLNRLK------- 174
Query: 188 ILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ +F P+P QG I + + ++ + +++K IN T+ ER L E
Sbjct: 175 -IDLSEFNYKRLKILPAPAQGVIGVASRKDDKEIIDILKKINDNKTYLESIAERYALREY 233
Query: 241 DGSCKSAIAGFAY--CKGSTLYFY-GIVLASDGK 271
G C++ + K + LY +V +GK
Sbjct: 234 GGGCQAPFGALSKYDTKNNELYLTCDVVYTLNGK 267
>gi|239624018|ref|ZP_04667049.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales
bacterium 1_7_47_FAA]
gi|239522049|gb|EEQ61915.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales
bacterium 1_7_47FAA]
Length = 301
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 129/269 (47%), Gaps = 15/269 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL L P + ++ T GD+I ++ L E GGKG+F
Sbjct: 5 IRIGTRKSALALIQTHLIADGLK--RAWPDIEVELVTKETLGDKILDKPLQEFGGKGVFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E E+ + G ID AVHSAKD+P +L +GL I+A R D RDV ++ S KD H
Sbjct: 63 SEFEQAMKEGAIDLAVHSAKDLPMELGEGLVIAAVSGRGDPRDVLVTMKG-SPKDRE-HI 120
Query: 126 VIGTSSLRRKALLLRWR-------SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
VIGTSS RR+ + +R + ++ RG + TRL KL I+LA AG++R
Sbjct: 121 VIGTSSPRRQLEAVEYRGQLWPGAASLTCATLRGNVHTRLRKLEEGLYDGIILAAAGLER 180
Query: 179 LK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
L + L+ F P+ GQG + +E A L + I+ + + ER
Sbjct: 181 LDLLGNPSYDFKYLDPTVFIPAGGQGIMAVEAR-EGSDAARLCQAIDSREGRLCLTLERM 239
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGI 264
L LD C I ++ + +GI
Sbjct: 240 VLKLLDAGCHEPIGIYSNIMDGKMEVWGI 268
>gi|254566627|ref|XP_002490424.1| Phorphobilinogen deaminase [Pichia pastoris GS115]
gi|238030220|emb|CAY68143.1| Phorphobilinogen deaminase [Pichia pastoris GS115]
Length = 344
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 130/254 (51%), Gaps = 12/254 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LA+ A R ++ + P ++ +ST GD++ N+ L GGK L+T
Sbjct: 15 LKLGSRKSALAIIQAEIVRQLIL--KEYPELETKLVSVSTLGDQVQNKALFTFGGKSLWT 72
Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
+E+E L+ +ID VHS KDMPT L ++ + RED RD + + +S
Sbjct: 73 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 132
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAG 175
L DL +V+GTSS+RR A LL+ + RG ++TRL KL++ + +LLA AG
Sbjct: 133 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 192
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R + I LN + S GQGA+ +E + + + + I H T ERA
Sbjct: 193 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 252
Query: 236 FLAELDGSCKSAIA 249
L L+G C I
Sbjct: 253 LLRYLEGGCSVPIG 266
>gi|296809948|ref|XP_002845312.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
gi|238842700|gb|EEQ32362.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
Length = 330
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 145/291 (49%), Gaps = 14/291 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R++L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRNAL--VARWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPETCTLSAIIKREDPRDALVVKKGQPNMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SVIGTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+
Sbjct: 123 ELPAGSVIGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E + + E+++ I + T + ER
Sbjct: 183 RTGHGYRISQYLDSKNGQMLHAVGQGALGVEIRAGDARMIEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGN 281
L L+G C + + T L IV + DGK E ++G+
Sbjct: 243 LLRTLEGGCSAPLGVETEWVQDTDGKEMLRLRCIVTSIDGKEAVETEKDGD 293
>gi|86751126|ref|YP_487622.1| porphobilinogen deaminase [Rhodopseudomonas palustris HaA2]
gi|86574154|gb|ABD08711.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris HaA2]
Length = 326
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 146/307 (47%), Gaps = 22/307 (7%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K P RIGTR S +ALA + + L ++ P I+ T GD L GGK
Sbjct: 2 KIPVRIGTRKSVMALAQTEDIANQLRAAASELDPE---IVRFETVGDSDQVSKLLPHGGK 58
Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L
Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPANDSMVLRKGLTLD 118
Query: 120 DLALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------- 165
+L IGT+++RR A R ++ VI FRG +TR+ KL+N +
Sbjct: 119 ELKASRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADTRIRKLDNREKQRMPDGGEV 178
Query: 166 --AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A A+++A +G++R+ I ++ P+ GQG + +E V+ + ++ + +I+
Sbjct: 179 GPADALIMARSGLERVGFVDRIVHDFTPQEMLPAAGQGIVAVECPVHEWQTRKYLALIDD 238
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ ER L L+G C S +A ++ GS + VL G +F E +R G
Sbjct: 239 PKARLFCDAEREVLWVLNGHCNSPMAAYSTINGSEMTLSASVLDEAGGLFIEATRTGPAN 298
Query: 284 DAINIGR 290
+GR
Sbjct: 299 RPRELGR 305
>gi|320106346|ref|YP_004181936.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4]
gi|319924867|gb|ADV81942.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4]
Length = 350
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 149/351 (42%), Gaps = 65/351 (18%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTLTEI 58
R+G+R S LAL A +SL H I + T GDR+ N E+
Sbjct: 3 LRLGSRGSQLALWQANHIAASLRGAG----HTTKITIIRTTGDRMQDPAYVKENPVTPEM 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG+F +EIE+ L+ GEID AVHS KD+PT + ++A R D RD +S L
Sbjct: 59 DAKGIFIKEIEEALLRGEIDLAVHSLKDLPTVMDPRFTLAAIPTRADARDALLSPEWVQL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + +GT+S RRKA +L R D+ ++ RG I+TRL KL + A++LA AGI R
Sbjct: 119 HTLPDGARVGTTSPRRKAQMLAHRPDLQFVEIRGNIDTRLRKLAAGQCDALVLACAGIDR 178
Query: 179 LKKEKV--------------------------------------------IKEILNIEDF 194
L + I+E +
Sbjct: 179 LGARLLHPVDLDPAHPEHGRAPHVECVTHADHDHLEEHPTEHEPAGQVDWIRERFAADTM 238
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+PGQGA+ +ET + P+ V ++ +T +V ER L L G C + A+C
Sbjct: 239 CPAPGQGALGVETLSDAPEVIAAVSALDDAETRYAVEAERWMLHALGGGCSLPVG--AWC 296
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRN--------GNRCDAINIGRDAAQYIR 297
L D + E+S N G R A + R A + ++
Sbjct: 297 VDKRLTANVTAADGDEMLSSEISANEGESARSLGERVAADLVARGARELLQ 347
>gi|297622476|ref|YP_003703910.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093]
gi|297163656|gb|ADI13367.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093]
Length = 320
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 13/262 (4%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRI--TNRTLTEIGGKGLF 64
RI TR S LAL A R L + ++PL T+GDR + G+G F
Sbjct: 21 RIATRKSALALWQATWVRERLAALGV----ATELVPLDTQGDRTQEAGTPFRLMPGQGFF 76
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD---- 120
T+ ++ ++ G D AVHS KD+P+ L GL+++A RED RDV + + +
Sbjct: 77 TKAVQDAVLEGRADVAVHSHKDLPSARLAGLELAAVTEREDPRDVLLVRPGAARPESAAL 136
Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177
L +V+GTS+ RR+A L R D+ V + RG + TR+ L + A + A
Sbjct: 137 PLVEGAVVGTSAARRQAQLRHLRPDVRVAELRGNVPTRVRALREGRYDAVVLAAAGLARL 196
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
L + L+ + F P+P QGA+ +E + + L+ ++ D + +V ER +
Sbjct: 197 ALDLSDLTVYPLDPKRFVPAPAQGALALEIRRGDAELAALLTELHAPDAYQTVAAERGLM 256
Query: 238 AELDGSCKSAIAGFAYCKGSTL 259
L G C+ A+ +A +G L
Sbjct: 257 GMLQGGCQLALGAYAALQGGEL 278
>gi|328350818|emb|CCA37218.1| hydroxymethylbilane synthase [Pichia pastoris CBS 7435]
Length = 376
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 130/254 (51%), Gaps = 12/254 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LA+ A R ++ + P ++ +ST GD++ N+ L GGK L+T
Sbjct: 47 LKLGSRKSALAIIQAEIVRQLIL--KEYPELETKLVSVSTLGDQVQNKALFTFGGKSLWT 104
Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
+E+E L+ +ID VHS KDMPT L ++ + RED RD + + +S
Sbjct: 105 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 164
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAG 175
L DL +V+GTSS+RR A LL+ + RG ++TRL KL++ + +LLA AG
Sbjct: 165 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 224
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R + I LN + S GQGA+ +E + + + + I H T ERA
Sbjct: 225 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 284
Query: 236 FLAELDGSCKSAIA 249
L L+G C I
Sbjct: 285 LLRYLEGGCSVPIG 298
>gi|315654433|ref|ZP_07907341.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333]
gi|315491468|gb|EFU81085.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333]
Length = 373
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 135/268 (50%), Gaps = 28/268 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL +TR+ D+ + H + + +T+GD I +L +GG G
Sbjct: 8 ERPLVIGTRASALALT---QTRAVASDLEQRGLH-VQVQTFTTEGD-INRASLASLGGVG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL
Sbjct: 63 VFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA---HA----------- 168
S +GT S RR + R DI ++D RG + TR+ ++ A HA
Sbjct: 123 AGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEHAGLPSGKAAEDL 182
Query: 169 --ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVKV 220
++LA AG++RL + I + L P+ GQGA+ +ET + E ++K
Sbjct: 183 DGVVLARAGLRRLGMDDAITDSLE-GTVIPAGGQGALALETRSELLDSDEGRNFAQILKF 241
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAI 248
++ E T V+ ERA L L+ C + +
Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPL 269
>gi|298345857|ref|YP_003718544.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063]
gi|304390438|ref|ZP_07372391.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315657641|ref|ZP_07910523.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298235918|gb|ADI67050.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063]
gi|304326194|gb|EFL93439.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315492113|gb|EFU81722.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 373
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 28/268 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL +TR+ D+ + H + + +T+GD I +L +GG G
Sbjct: 8 ERPLVIGTRASALALT---QTRAVASDLEQRGLH-VQVQTFTTEGD-INRASLASLGGVG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL
Sbjct: 63 VFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-------------- 168
S +GT S RR + R DI ++D RG + TR+ ++ A A
Sbjct: 123 AGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEQAGLPSGKAAEDL 182
Query: 169 --ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVKV 220
++LA AG++RL + I + L P+ GQGA+ +ET + E ++K
Sbjct: 183 DGVVLARAGLRRLGMDDAITDSLE-GTVIPAGGQGALALETRSELLDSDEGRNFAQILKF 241
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAI 248
++ E T V+ ERA L L+ C + +
Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPL 269
>gi|146303002|ref|YP_001190318.1| porphobilinogen deaminase [Metallosphaera sedula DSM 5348]
gi|189028093|sp|A4YD92|HEM3_METS5 RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|145701252|gb|ABP94394.1| hydroxymethylbilane synthase [Metallosphaera sedula DSM 5348]
Length = 290
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 136/265 (51%), Gaps = 13/265 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S L+L E ++ + + I + TK D N+ L EIG KG+F
Sbjct: 3 IRIAARGSKLSLKQV-EIVTTYLQAKG---YETEFIEIKTKADLFGNKPLHEIG-KGVFE 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ + ++ G D AVHS KDM ++L GL++ A RE+ DV +S +L++L S
Sbjct: 58 KEVNEAVLQGRADIAVHSMKDMSSELPPGLELLATPKRENPVDVLVSEL--NLEELPEKS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT SLRR L R D+ V + RG ++TRL K +++ I+LA AG++RL E V
Sbjct: 116 RIGTGSLRRANFLKVVRPDLVVENIRGNVDTRLRKYRDHEYDGIILAEAGLRRLGVE-VK 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L++E F P P QG I + V +PK L + +N T E+ + + G C
Sbjct: 175 RFPLDVESFTPEPNQGIIAV---VGSPKFLGLFQELNDTGTMKEALAEKETVKVVGGGCH 231
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270
S + + L +GI S+G
Sbjct: 232 SPLGVLFRLEDDVL--HGIASYSNG 254
>gi|91978235|ref|YP_570894.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB5]
gi|91684691|gb|ABE40993.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB5]
Length = 330
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 152/310 (49%), Gaps = 28/310 (9%)
Query: 3 KKPFRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
K P RIGTR S +ALA A + R++ ++ ++ I+ T GD L
Sbjct: 6 KIPVRIGTRKSVMALAQTEDIAKQLRAAASEL------DVEIVKFETVGDSDQISKLLPH 59
Query: 59 GGKG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQ 116
GGKG F EI +I+G++ A+HS KDMP + GL I A L R+ D +
Sbjct: 60 GGKGGAFVAEIRAAVIAGQLQAAMHSLKDMPGNEDTPGLVIGATLARDPATDALVLREGL 119
Query: 117 SLKDL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------- 165
+L++L IGT+++RR A R +++VI FRG +TR+ KL+ +
Sbjct: 120 TLEELKKSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRIRKLDAREKQRLPDG 179
Query: 166 -----AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
A A+++A AG++R+ I ++ PS GQG + +E V++ + + + +
Sbjct: 180 GEVGPADALIMARAGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVDDWQTRRYLAM 239
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
I+ + + ER L L+G C S +A + G+ + + VL +G +F E +R+G
Sbjct: 240 IDDPKSRLCCDAEREVLWVLNGHCNSPMAAHSTVNGAEMTLHASVLDEEGGLFIETTRSG 299
Query: 281 NRCDAINIGR 290
+GR
Sbjct: 300 PANRPRELGR 309
>gi|71005230|ref|XP_757281.1| hypothetical protein UM01134.1 [Ustilago maydis 521]
gi|46096460|gb|EAK81693.1| hypothetical protein UM01134.1 [Ustilago maydis 521]
Length = 770
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 124/245 (50%), Gaps = 21/245 (8%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG--LFTEEIEKKLIS 74
L H F+T S + PH I +ST GD+ L IGG+G ++T+E+E L
Sbjct: 234 LLHGFQTTSEA----PLRPHAFPITSMSTAGDQNLRSPLYVIGGEGKAIWTKELEVALEQ 289
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSS 131
G +D VH KD+PT L +GL+++A L RED RD + + L +L + SVIGTSS
Sbjct: 290 GAVDAIVHCLKDVPTALPQGLELAAVLEREDPRDALVVKAGLPYKVLDELPVGSVIGTSS 349
Query: 132 LRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEIL 189
+RR A L R + D RG I TRL KL+ N A++LA AG+ RL I L
Sbjct: 350 VRRVAQLRRRYPHLVFSDVRGNINTRLAKLDAPNGPYTALILAAAGLVRLNMHARITAFL 409
Query: 190 NIEDFPPSPGQGAICIE----------THVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ S GQG++ IE T + + +EL++ I ER+ L E
Sbjct: 410 SSPVLLHSVGQGSLAIEVRTPPEGADPTTNRDARIRELIRSIGDWRATFRAEAERSLLKE 469
Query: 240 LDGSC 244
L+G C
Sbjct: 470 LEGGC 474
>gi|68483293|ref|XP_714388.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|68483380|ref|XP_714346.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|10720013|sp|O94048|HEM3_CANAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3859661|emb|CAA21999.1| Porphobilinogen deaminase [Candida albicans]
gi|46435905|gb|EAK95277.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|46435949|gb|EAK95320.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|238883889|gb|EEQ47527.1| porphobilinogen deaminase [Candida albicans WO-1]
Length = 340
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 146/281 (51%), Gaps = 20/281 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG R S LA+ + + + D P + I+ LST GD++ + L GGK L+T
Sbjct: 14 VQIGGRKSKLAVVQSEIVKKVIEDT--FPNLSCSILALSTLGDKVQTQPLYTFGGKSLWT 71
Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
+E+E L+ ++D VHS KDMPT L + ++ RED RD + + +S
Sbjct: 72 KELEILLLDSVDEFPKLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKS 131
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
LKDL +++GTSS+RR + L++ + RG I+TRLNKL+ NN+ ++LA AG
Sbjct: 132 LKDLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAG 191
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--E 233
+ RL I L+ D + GQGA+ IE + + ++K I ED ++ C E
Sbjct: 192 LIRLGLGHRITSYLD--DMYYAVGQGALGIEIRKGDDNIKSILKKI--EDPIATICCLAE 247
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKI 272
R+ + L+G C + + S L GI+++ DG +
Sbjct: 248 RSLMRYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTV 288
>gi|150020602|ref|YP_001305956.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429]
gi|149793123|gb|ABR30571.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429]
Length = 279
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 137/260 (52%), Gaps = 13/260 (5%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+GTR S LAL + L ++ +P + I P+ TKGDR+ + +IGGKG+F
Sbjct: 4 RVGTRKSKLALIQTQLVVNKLKEL--LPNIDFEITPVVTKGDRLKT-PIDKIGGKGVFVS 60
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
+IEK ++ ++D A+HS KD+P+K+ L +++ L RE DVFI ++ +L +
Sbjct: 61 DIEKLILDDKLDIAIHSMKDLPSKIPDKLFLTSVLKRECPNDVFIGK--ENFFNLKKGAK 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGTSS RR + R DI ++ RG ++TR+ K+ + I++A AG+ RL + I
Sbjct: 119 IGTSSKRRALQINMLRPDIEIVPIRGNVDTRIKKI--GELDGIVIAAAGVIRLGLKDKIT 176
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSCK 245
+ E P+P QG + +E K E +K VI T ER L+ L+ C
Sbjct: 177 NLFEFEKIVPAPCQGILALEFSEKFLKPFEEIKDVIVDPKTEVETQIERKILSLLNFDCN 236
Query: 246 SAIAGFAYCKGS---TLYFY 262
+ GF YC S T Y +
Sbjct: 237 TPF-GF-YCDASKKVTCYMF 254
>gi|238578919|ref|XP_002388878.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553]
gi|215450574|gb|EEB89808.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553]
Length = 350
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 128/247 (51%), Gaps = 18/247 (7%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T GD+ ++ L +GGK L+T+E+E L+ E+D VHS KD+PT L +G I L
Sbjct: 52 MTTAGDKNQSQALYLLGGKALWTKELEVALLEREVDMLVHSLKDVPTVLPEGCMIGGILE 111
Query: 103 REDIRDVFISHTA-----QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
RED D + +SL DL SV+GTSS+RR A L R + D RG + TR
Sbjct: 112 REDPVDSLVVKRGYEDKWKSLDDLPEGSVVGTSSVRRVAQLKRNYPGLKFQDVRGNLNTR 171
Query: 158 LNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS----PGQGAICIETHVNN 211
+ KL+ + AI+LA AG+ RL + + L + PP+ QGA+ +E N+
Sbjct: 172 MAKLDAPDGPYAAIILAKAGMVRLG----MGDRLTCDLAPPTLFHAVSQGALAVEIRNND 227
Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS---TLYFYGIVLAS 268
+A EL K I H++T + ERA L L+G C + ++ K L G V +
Sbjct: 228 KEALELCKRITHQNTAWKCSAERACLRVLEGGCSVPVGVSSFLKHDKELVLEISGCVTSL 287
Query: 269 DGKIFHE 275
DG E
Sbjct: 288 DGSTHVE 294
>gi|291295115|ref|YP_003506513.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
gi|290470074|gb|ADD27493.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
Length = 299
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 122/231 (52%), Gaps = 1/231 (0%)
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E + + L E+D AV+S K +PT+ GL++ A R + R+ + +A+ L+DL
Sbjct: 50 AEALRQALGKREVDIAVYSLKYLPTQEAPGLRLVAVPKRMEPREALVGRSAKRLEDLPKG 109
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+G +SLRRKA LL R D++V D G ++ RL+ L + A+++ A + RL
Sbjct: 110 AVVGVNSLRRKAQLLAHRPDLNVCDLEGDVDDRLSALGTGEYDAMIIGAASLLRLDLRNR 169
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++++ E P+PGQGA+ +E + A+EL +NH ++ ERAFL L
Sbjct: 170 IDQLIDPEVMLPAPGQGALGLEVRQGDDWAEELAYSLNHRASFVRTTAERAFLRALGAGD 229
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
A A A +G TL G+V + DG G+ +A +G D AQ
Sbjct: 230 GCAAAALATLEGDDTLLLQGVVASPDGHELIRAEIEGDAEEAAELGHDLAQ 280
>gi|146338934|ref|YP_001203982.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278]
gi|146191740|emb|CAL75745.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278]
Length = 325
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 20/303 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR-ITNRTLTEIGGKGLF 64
FRIGTR S +ALA E L IP +I I+ T GD T++ LT G G F
Sbjct: 4 FRIGTRKSTMALAQTEEIARRLQ--AAIPSLDIEIVKFETTGDSDQTSKLLTHGGKGGAF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
EI + ++ G++ A+HS KDMP + GL I+A L R+ DV + +L+D
Sbjct: 62 VAEIRRAMLDGKLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRKGLALEDFRK 121
Query: 124 HS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AH 167
IGT+++RR A R +I FRG +TR+ KL+N + A
Sbjct: 122 DGGRGFKIGTNAVRRAAYARRLFPHAELIHFRGAADTRIRKLDNGELQRMPDGGAVGPAD 181
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
A+++A +G++R+ + D P+ GQG + +E ++ + + ++ ++
Sbjct: 182 ALIMARSGLERVGLSDRASHEFPVADMLPAVGQGIVAVECPASDFETRRILATVDDAAAR 241
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
+ ER L L+G C S IAGF+ G+ + VL DG F E R G
Sbjct: 242 TCADAEREVLWVLNGHCNSPIAGFSTIDGAQMTLTASVLDEDGGRFIEAQRTGPADRPRE 301
Query: 288 IGR 290
+GR
Sbjct: 302 LGR 304
>gi|268324707|emb|CBH38295.1| porphobilinogen deaminase [uncultured archaeon]
Length = 290
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 12/266 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LAL + L ++ I + + GD +T+R L E+ G+F ++
Sbjct: 3 VGTRGSNLALVQTKKVCERLSELG----VECEIKTVQSLGDVMTDRGLYEMPTIGVFVKK 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ L+ +ID AVHS KDMP++ + L SA LPR+ D +S L D+ +VI
Sbjct: 59 LDMMLLDAKIDIAVHSMKDMPSEREEELDTSAVLPRDSPYDALVSR--YRLDDMPEGAVI 116
Query: 128 GTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
GTSS+RR+ L + + +++ D RG ++TR+ K + +++LA AG +RLK +
Sbjct: 117 GTSSVRRRYQFLNYVGERGVKVTIKDIRGNVDTRIAKFRRGEYDSVILAEAGFERLKLD- 175
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E L+ + F PSP QG I + K E++K I+ +T E L + G
Sbjct: 176 IEYERLDRDPFVPSPRQGIIAVVAR-RGSKESEILKQIDDSETRIEAEVEEEVLKVIGGG 234
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASD 269
C + A KG ++ V ASD
Sbjct: 235 CSLPVGVHATAKGGSVELAVYVAASD 260
>gi|156101752|ref|XP_001616569.1| porphobilinogen deaminase [Plasmodium vivax SaI-1]
gi|148805443|gb|EDL46842.1| porphobilinogen deaminase, putative [Plasmodium vivax]
Length = 341
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 69/320 (21%)
Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106
GD I ++ + GGKG+FT+E++++LI + VHS KD+P +L + +Q+S +L R+ I
Sbjct: 2 GDHILDKKVGLFGGKGIFTKELDEQLIKKNVHICVHSLKDVPMELPEHVQLSCFLKRDTI 61
Query: 107 RDVFISHTAQSLKDLALHSV---------------------------------------I 127
D F+S +L+D+ + I
Sbjct: 62 NDAFLSVKYATLEDMNKRKMANKVEEESDQEKGTIQQMTNQGLKRDNCEGDKCTNFIPTI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR + + +++V + RG I TR+ KL N + AI++A G++RL +KV++
Sbjct: 122 GTSSLRRSSQIKYTYKNVAVKNVRGNINTRIAKLCNGQYDAIIIAKCGLERLLTKKVVRN 181
Query: 188 I-------------LNIEDFP-----------------PSPGQGAICIETHVNNPKAQEL 217
I LN D P+ QG I + +H N+ +
Sbjct: 182 IIRGKGKVPPEKFLLNHNDMETNLRLLRIQQINRRTIYPALCQGIIAVTSHKNDVDTSNI 241
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+K IN E N ER+FL +++G+C I G+A G + F ++ + G+ + V
Sbjct: 242 LKNINDEKAQIMANVERSFLYQIEGNCMMPIGGYAQIVGGEIVFNAVINDTHGREKYHVR 301
Query: 278 RNGNRCDAINIGRDAAQYIR 297
G + NI AA ++
Sbjct: 302 EVGTVQNCNNIAAMAATKMK 321
>gi|152964587|ref|YP_001360371.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216]
gi|151359104|gb|ABS02107.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216]
Length = 326
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 141/259 (54%), Gaps = 9/259 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P R+GTR S LA T+SS + D+ + + ++ ++T+GD + L +IGG G
Sbjct: 3 RPLRLGTRRSALAT-----TQSSWVADLLRRGGSPVELVEITTRGD-VDRAPLAQIGGTG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L++GE+D AVHS KD+PT GL ++A RED RDV ++ +L DL
Sbjct: 57 VFVSALRDALLAGEVDLAVHSLKDLPTSAADGLALAAVPGREDPRDVLVAAGGATLADLP 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT S RR+ALLL R D+ V+ RG ++TR+ + A++LA AG+ R +
Sbjct: 117 RGARVGTGSPRRRALLLALRPDLDVVAVRGNVDTRIGFATGGELDAVVLAAAGLARTGRL 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E+ E F P+PGQGA+ +E ++ + + ++ +V ER LA L+
Sbjct: 177 HEASELFAPEVFVPAPGQGALAVECRADDAEVLAALAALDVPAVRWAVAAERQVLASLEA 236
Query: 243 SCKSAIAGFAYCKGSTLYF 261
C + + A+ G L+
Sbjct: 237 GCSAPVG--AHAAGGVLHV 253
>gi|254577639|ref|XP_002494806.1| ZYRO0A10098p [Zygosaccharomyces rouxii]
gi|238937695|emb|CAR25873.1| ZYRO0A10098p [Zygosaccharomyces rouxii]
Length = 327
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 151/312 (48%), Gaps = 16/312 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG R S LA+ + E L++ K P + L T GD+ ++ L GGK L+T
Sbjct: 5 IRIGGRQSQLAIVQS-ELVKHLIE-QKFPDITCSVFALQTLGDQQQSKPLYSFGGKALWT 62
Query: 66 EEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
+E+E L + +D VHS KDMPT L G ++ R D D + ++L
Sbjct: 63 KELEDLLYDEDDNRKLDIIVHSLKDMPTTLPDGFELGGITERVDPSDCLVMPQGSPHKNL 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
L SV+GTSS+RR A L R + RG + TR+ KL++ N I+LA AG+
Sbjct: 123 DTLPAGSVVGTSSVRRSAQLKRKYPHLRFESIRGNLHTRIRKLDDPQNDYQCIILASAGM 182
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KRL I + + GQGA+ IE + + ++++ + H++T ER
Sbjct: 183 KRLGLGYRITNTFDSSVMYHAVGQGALGIEIRAQDKEMKKILDAVCHKNTTVCCLAERQL 242
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFY--GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+ L+G C I + +T Y + GIV++ DGK E+++ D I RD+ +
Sbjct: 243 MRSLEGGCSVPIGVGSRYDETTGYLHLRGIVVSVDGKQAVELNQELAINDVI---RDSIE 299
Query: 295 YIRFISNKNVFN 306
+ ++ K + N
Sbjct: 300 CGKLLAEKMISN 311
>gi|259489684|tpe|CBF90157.1| TPA: hydroxymethylbilane synthase, putative (AFU_orthologue;
AFUA_5G11760) [Aspergillus nidulans FGSC A4]
Length = 347
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 145/291 (49%), Gaps = 14/291 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LAL ++L + + P + I T GD+ T L + K
Sbjct: 15 QKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTKN 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+T+E+E L +G +D VHS KD+PT L + + RED RD + SL
Sbjct: 73 LWTQELEDLLEAGSVDLIVHSLKDVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNMSLA 132
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++ ++LA AG+
Sbjct: 133 EMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAAGLL 192
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL I + L+ + + GQGA+ IE + ++++ I H++T + ER+
Sbjct: 193 RLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLAERS 252
Query: 236 FLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDGKIFHEVSRNGN 281
L L+G C + + GS+ L +V++ DG EV +G
Sbjct: 253 LLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGT 303
>gi|227541639|ref|ZP_03971688.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227182607|gb|EEI63579.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 290
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 17/302 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ ++ + ++T GD+ N + + G G+FT
Sbjct: 3 LRIGTRGSKLATTQAGHVRDALIRAG----YDAELTIITTPGDK--NLSPVQKIGVGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + + EID AVHS KD+PT +GL + Y RE + I+ +L L +
Sbjct: 57 QALREAMDRDEIDIAVHSCKDLPTGQPEGLA-TIYPVRETPCEALIARDGLTLDQLPEGA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 116 KVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDEA 175
Query: 186 KEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ + P+P QG + +E THV+ + +I+ T S ERA L+ L
Sbjct: 176 TQVFDPTYLMPAPAQGILAVESRTHVDA-----ISTLIDDHATL-SAQAERAVLSTLQAG 229
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + +A ++ G + A DG ++ D + +G A+ +R +
Sbjct: 230 CTAPLAAYSTVSGDEITLTAGAFALDGS--KQIVETATGTDPVALGTSVAEKLRACGAEE 287
Query: 304 VF 305
+
Sbjct: 288 II 289
>gi|209886240|ref|YP_002290097.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5]
gi|209874436|gb|ACI94232.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5]
Length = 338
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 142/308 (46%), Gaps = 20/308 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG- 62
K RIGTR S +ALA E L P ++ I+ T GD+ L ++GGKG
Sbjct: 12 KAMRIGTRKSVMALAQTSEIARQLTAAD--PALDVEIVKFETTGDQDQTGKLLDLGGKGG 69
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
F +I + G ++ A+HS KDMP + GL I A L R+ D + +L DL
Sbjct: 70 AFVAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGATLTRDPPTDALVVRHGVTLADL 129
Query: 122 ALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------ 165
IGT+++RR A + R + +I FRG +TR+ KL+N +
Sbjct: 130 RRTGGKGFKIGTNAVRRAAYVRRLFPECEIIHFRGAADTRIRKLDNGEKQRLPEGGEVGP 189
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
A A+++A AG++R+ I + ++ P+ GQG + +E ++ + I+
Sbjct: 190 ADALVMAQAGLERVGCADRIAHCFSPDEILPAVGQGIVAVECAASDWCTLARLAQIDDPV 249
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
+ ER L L+G C S IAG+A +G + VL F EV+R G
Sbjct: 250 SRCCAAAEREVLWVLNGHCNSPIAGYAIVEGDDVLLKAAVLDEANDHFIEVTRRGPASRP 309
Query: 286 INIGRDAA 293
+GR A
Sbjct: 310 RELGRAVA 317
>gi|242763889|ref|XP_002340664.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC
10500]
gi|218723860|gb|EED23277.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC
10500]
Length = 335
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 142/282 (50%), Gaps = 14/282 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LALA + +L + P + I T GDR ++ K
Sbjct: 9 ERKTFNIGTRKSKLALAQTYMVVDALK--KEYPQYEFNIKSKDTAGDRDKITAFKDMQTK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
L+TEE+E+ LI G++D VHS KD+PT L + LPRED RDV I SL
Sbjct: 67 NLWTEELEELLIGGQLDFIVHSLKDVPTLLPPTCALGGVLPREDPRDVLIVKPGLPYTSL 126
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176
++ SV+GTSS+RR A L + V RG I+TRL KL+ + I+LA AG+
Sbjct: 127 AEIPAGSVVGTSSIRRTAQLAMKFPHLKVQSLRGNIDTRLAKLDGEDSPYTCIILAAAGL 186
Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R I + L+ + GQGAI IE ++ E++ + + T+ V ER
Sbjct: 187 LRTGMGHRITQYLDSRSGSLLYAVGQGAIGIEVRSDDGLVLEMLNKVGDQKTFKEVLAER 246
Query: 235 AFLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDGK 271
+ L ++G C + + +G+T L+ I+++ DGK
Sbjct: 247 SLLRTIEGGCSAPLGVESEWINEVEGTTKLHVRSIIVSVDGK 288
>gi|118576540|ref|YP_876283.1| porphobilinogen deaminase [Cenarchaeum symbiosum A]
gi|118195061|gb|ABK77979.1| porphobilinogen deaminase [Cenarchaeum symbiosum A]
Length = 311
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 134/291 (46%), Gaps = 5/291 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ +GTR S L+LA +L + + P + + T+GD +R L I KG+F
Sbjct: 4 YTVGTRGSRLSLAQTGHVLDALKEAN--PEDEYKVRRIKTQGD-TDDRPLFAIDQKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ + G D AVHS KD+PT+L GL ++ R DV +S L L +
Sbjct: 61 KEIDRAVSEGGADFAVHSLKDVPTELAPGLVLACVPRRAAANDVLVSPGGSGLGSLPRGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR + R RSD+ V RG IETR+ K+ A++LA AGI RL + V
Sbjct: 121 TVGTSSLRRAVQVGRSRSDLHVKPVRGNIETRIAKVGAGY-DAVVLAEAGISRLGLD-VK 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L E F PSPGQG++ + + ++ I + ERA + C+
Sbjct: 179 YAALPEESFAPSPGQGSLALVARSGDAGTISMLNRIEDAASRAEAEAERALSERIGSGCR 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ A G L + DG V +G R +G A +
Sbjct: 239 FPVGALARSAGELLTIRAEAFSVDGSRSVSVQASGPRGSPRKVGESAGNEM 289
>gi|13541465|ref|NP_111153.1| porphobilinogen deaminase [Thermoplasma volcanium GSS1]
gi|25453027|sp|Q97B26|HEM3_THEVO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|14324849|dbj|BAB59775.1| hydroxymethylbilane synthase [Thermoplasma volcanium GSS1]
Length = 297
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 133/258 (51%), Gaps = 22/258 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+A A SSL + + I+ + GD T + IG G+F
Sbjct: 3 IKIGTRPSNLAVAQANMVASSLEAIG----IDTEIVKHRSAGDIDTKNPIYSIGKTGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++ ++ GEID AVHSAKD+P+++ L I+A L R D +S L+ L + +
Sbjct: 59 QDLNNMILRGEIDVAVHSAKDIPSEIENRLTIAATLKRGSFNDALVSKY--DLRSLPISA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR L R D+ + RG IETR+ K++ AI++A A I+RL
Sbjct: 117 KVGTSSIRRIFQLKYARQDLKFENIRGNIETRIAKMSELGLDAIVMAEAAIQRLG----- 171
Query: 186 KEILNIE-------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
LN+E F P+P QG I + + +++++ IN E+T++ + ER+ +
Sbjct: 172 ---LNVEYSKLDENKFVPAPNQGIIAVVSK-KEGTVRKILEEINDENTFEEMQIERSVVQ 227
Query: 239 ELDGSCKSAIAGFAYCKG 256
+L C + + + G
Sbjct: 228 QLKLGCSTPVGILSRPSG 245
>gi|331230279|ref|XP_003327804.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309306794|gb|EFP83385.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 461
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 137/295 (46%), Gaps = 32/295 (10%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL A + I +ST GD + L +GGK ++T+E
Sbjct: 69 IGTRNSKLALVQAESVEREINKRFSSDQIKTEIKSMSTSGDENLLKPLYLLGGKSVWTKE 128
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALH 124
+E L++G ID VHS KD+PT L G ++++ + RED RD I +L L
Sbjct: 129 LEFNLLNGSIDLIVHSLKDVPTSLPAGCELASVMLREDPRDALIIRNGLPFTNLSQLPAG 188
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKE 182
S+IGTSS+RR A L R +++ D RG ++TR KL+ ++ I+LA AG+KR+
Sbjct: 189 SIIGTSSVRRVAQLRRRFPNLAFQDIRGNLQTRFKKLDASDSPYTGIILAVAGLKRIGLA 248
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-----NPKAQE------------LVKVINHED 225
+ I L D + GQGAI IE N +E LVK +
Sbjct: 249 ERITSYLEPPDLYHAVGQGAIGIEIRTPPEIKLNETVEETILRERATTVRRLVKSLEDWR 308
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFA----------YCKGSTLYFYGIVLASDG 270
T S ERA L L+G C + + + + L G+V + DG
Sbjct: 309 TALSCEAERALLRRLEGGCSVPVGVTSSLVDLPMPCPWAPKARLTLTGVVTSVDG 363
>gi|148693633|gb|EDL25580.1| mCG10727, isoform CRA_a [Mus musculus]
Length = 371
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 127/266 (47%), Gaps = 29/266 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 60 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 117
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 118 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHP----------K 167
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKV 184
IG ++ RG + TRL KL+ + AI+LA AG++R+ +
Sbjct: 168 FIGK----------------TLETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQNR 211
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+G C
Sbjct: 212 VGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLEGGC 271
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
+A K LY G V + DG
Sbjct: 272 SVPVAVHTVMKDGQLYLTGGVWSLDG 297
>gi|326428753|gb|EGD74323.1| uroporphyrinogen decarboxylase [Salpingoeca sp. ATCC 50818]
Length = 737
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 151/315 (47%), Gaps = 38/315 (12%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ + IGTR S LAL A L V K P H I + T GD+ L + G G
Sbjct: 374 QRVYTIGTRGSVLALWQAHYVLDRL--VKKYPTHRFRIKVVDTAGDKDLTTALDKFGTTG 431
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ--S 117
+FT+ +E+ L+SGE+DC VHS KD+P+ L +++A R D RD + H + S
Sbjct: 432 VFTDALERALVSGEVDCVVHSLKDVPSTLHPSTRLAAISERHDPRDCVVFNPRHNGRYSS 491
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175
+ DL SV+GTSS RR+A L R ++ RG ++TRL KL++ N A++LA AG
Sbjct: 492 IADLPPGSVLGTSSARRRAFLARAYPSLTFKHVRGNVKTRLRKLDDPANGYDALVLASAG 551
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---------------------- 213
++RL E + E L+++ P + GQ A+ ++ +
Sbjct: 552 LERLNMEARVGEKLSVDVVPHAVGQAALGVQVRCSAKPGPHGGEGGDDDDDDGDKDAAVL 611
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGK 271
A+ L + +T + ER FL L G C IA + T + G V + DGK
Sbjct: 612 AEMLHASVQCNETALVCSAERGFLRSLGGGCSLPIAVRSQRDADTGRIVLCGNVCSVDGK 671
Query: 272 IFHEVSRNGNRCDAI 286
SR CDA+
Sbjct: 672 TL--ASRT---CDAV 681
>gi|119480587|ref|XP_001260322.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181]
gi|119408476|gb|EAW18425.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181]
Length = 363
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116
GK L+T E+E L++G++ C VHS KDMPT L + A RED D +
Sbjct: 84 GKSLWTNELELDLVAGKVHCLVHSLKDMPTTLPPHCLLGAVPEREDCSDAVCMRSDLKFT 143
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
S+ L S++GTSS RRKAL+ R + V++ RG ++TRL KL+ +++ ILLA A
Sbjct: 144 SIDQLPPGSIVGTSSSRRKALVRRNWPHLEVVECRGNVDTRLAKLDAPSSRFSCILLATA 203
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT-WDSVNCE 233
G+ RL I L+ FP + GQGA+ +E + P ELV+ ++H+ + W + E
Sbjct: 204 GLLRLGLGHRITHRLDDSIFPYAVGQGALGLEVSTDRPDILELVRHVDHKPSRWRGI-AE 262
Query: 234 RAFLAELDGSCKSAIA 249
RA L L G C S I
Sbjct: 263 RAMLRSLQGGCSSPIG 278
>gi|284047684|ref|YP_003398023.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731]
gi|283951905|gb|ADB46708.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731]
Length = 288
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 9/248 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K + TR S LALA L++ + I ++T GDR L +IGG+G+
Sbjct: 2 KKLIVATRGSRLALAQTHIV-CRLLEEAGVETE---IRTITTAGDRDRIHALVKIGGRGI 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F EIE++L+SGE D AVHSAKD+P +L GL I+ + D RD + + L+
Sbjct: 58 FVREIERELLSGEADIAVHSAKDLPYQLASGLVIAGTPSQADPRDALVLLKERKLEA--- 114
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--K 181
SV+GT S RR + R ++ D RG + TRL+KL + AI+LA AGI+RL
Sbjct: 115 GSVVGTGSPRRIREISRVLPELVFRDIRGNVTTRLHKLERGEYDAIVLAMAGIQRLALDM 174
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ L+ E P+ QG I +E + + L++ I+ +TW ER +
Sbjct: 175 EQFQIRPLSTEQVIPAGCQGIIGVECRQKDRELVRLLQQISDPETWRRFQWERQLFTSMK 234
Query: 242 GSCKSAIA 249
C +
Sbjct: 235 VDCSRPVG 242
>gi|170085353|ref|XP_001873900.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651452|gb|EDR15692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 342
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 140/276 (50%), Gaps = 16/276 (5%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T GD+ ++ L +GGK L+T+E+E L +D VHS KD+PT L G + L
Sbjct: 48 MTTAGDKNQSQALYLLGGKALWTKELEVALKEHHVDMLVHSLKDVPTTLPDGCVLGGILE 107
Query: 103 REDIRDVFISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
RED D + + SL +L SVIGTSS+RR A L R + +D RG + TRL
Sbjct: 108 REDPVDSLVVKHGERWKSLDELPSGSVIGTSSVRRIAQLKRKYPHLKFMDVRGNLNTRLA 167
Query: 160 KLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPS----PGQGAICIETHVNNPK 213
KL+ + A++LA AG+ RL + + + ++ PP+ QGA+ IE ++ +
Sbjct: 168 KLDAPEGPYSALILAKAGLVRLG----MGDRITLDLTPPTLFYAVSQGALGIEVRSDDVE 223
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-- 271
A EL + + H +T ERA L L+G C + + +G L G V A DG+
Sbjct: 224 ALELCERLTHRETQLKCLAERACLRVLEGGCSVPVGVASQLEGGVLSLSGCVTAIDGESH 283
Query: 272 IFHEVSRN-GNRCDAINIGRDAAQYIRFISNKNVFN 306
+ H++ N DA +G A+ + K + +
Sbjct: 284 VEHKLEEKVENAEDAEKVGTKLAKILLDSGAKKILD 319
>gi|227487191|ref|ZP_03917507.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092849|gb|EEI28161.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51867]
Length = 290
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 17/294 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ ++ + ++T GD+ N + + G G+FT
Sbjct: 3 LRIGTRGSKLATTQAGHIRDALIRAG----YDAELTIITTPGDK--NLSPVQKIGIGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + + EID AVHS KD+PT +GL + Y RE + I+ +L L +
Sbjct: 57 QALREAMDRDEIDIAVHSCKDLPTGQPEGLA-TIYPVRETPCEALIARDGLTLDQLPEGA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 116 KVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDEA 175
Query: 186 KEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ + P+P QG + +E THV+ + +I+ T S ERA L+ L
Sbjct: 176 TQVFDPTYLMPAPAQGILAVESRTHVDA-----ISTLIDDHATL-SAQAERAVLSTLQAG 229
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + +A ++ G + A DG ++ D + +G A+ +R
Sbjct: 230 CTAPLAAYSTVSGDEITLTAGAFALDGS--KQIVETATGTDPVALGTTVAEKLR 281
>gi|196004682|ref|XP_002112208.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens]
gi|190586107|gb|EDV26175.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens]
Length = 314
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 130/271 (47%), Gaps = 37/271 (13%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME+ RIGTR S LA+ +L ++H P I I+ + T GDR+ ++ L EIG
Sbjct: 4 MEETVVRIGTRKSQLAMIQTHSVVDALREIH--PKARIEIVTMDTIGDRVLDKALPEIGQ 61
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
LFT+++E L +ID +HS KD+P+ L +GL I+
Sbjct: 62 TNLFTKDLEVALTDNKIDLIIHSLKDVPSTLPEGLAIA---------------------- 99
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRL 179
A+ +VIGTSSLRR A L R + + RG + TRL KL+ + + A++LA AG++
Sbjct: 100 -AIGNVIGTSSLRRIAQLKRRFPHLKFENVRGNLNTRLKKLDESGIYDALVLAGAGVE-- 156
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
L ++ + GQGA+ IE N+ K L+ D+ ERAFL
Sbjct: 157 ---------LTPDECLYAIGQGALGIEIRKNDKKTFSLISAYTDFDSLVCNAAERAFLRF 207
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
LD C I + + L G V + DG
Sbjct: 208 LDKGCSVPIGVYTEFTENKLKITGAVFSLDG 238
>gi|150401746|ref|YP_001325512.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3]
gi|150014449|gb|ABR56900.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3]
Length = 342
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 137/259 (52%), Gaps = 27/259 (10%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL ++ L ++++ + I+ T GD+ + L+E+G G+FT+E
Sbjct: 46 IGTRGSKLALTQTNYIKALLENLNENIDIEVKIVK--TTGDKDQSSKLSELG-LGVFTKE 102
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS-- 125
++ K+++ EID AVHS KD+PT + L I++ RE D+ + + + D+ +
Sbjct: 103 LDLKMLNNEIDIAVHSLKDVPTVWNENLTIASTPKRESYADLILWNKEDN--DINIEKCN 160
Query: 126 -----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
++GTSS+RR+ L ++ RG ++TRLNKL N + AI+LA AG+ RLK
Sbjct: 161 EKDNIIVGTSSIRRQEFLKIKYPNLKTKLLRGNVDTRLNKLRNKEYDAIILAEAGLNRLK 220
Query: 181 KEKVIKEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+++ DF P+P QG + + + +N + +++ INH+ T+ E
Sbjct: 221 --------MDLSDFNYERLNILPAPAQGVVGVASRTDNKEVISILQKINHKKTFLEALAE 272
Query: 234 RAFLAELDGSCKSAIAGFA 252
R L E G C++ +
Sbjct: 273 RYALREYGGGCQAPFGALS 291
>gi|148253694|ref|YP_001238279.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1]
gi|146405867|gb|ABQ34373.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1]
Length = 325
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 140/303 (46%), Gaps = 20/303 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR-ITNRTLTEIGGKGLF 64
FRIGTR S +ALA E L IP +I I+ T GD T++ LT G G F
Sbjct: 4 FRIGTRKSTMALAQTEEIARRLQ--AAIPSLDIEIVKFETTGDSDQTSKLLTHGGKGGAF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL----K 119
EI + ++ G + A+HS KDMP + GL I+A L R+ DV + SL K
Sbjct: 62 VAEIRRAMLDGRLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRRGLSLDEFRK 121
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AH 167
D IGT+++RR A R +I FRG +TR+ KL+N + A
Sbjct: 122 DGGRGFKIGTNAVRRAAYARRLFPQAELIHFRGAADTRIRKLDNGELQRLPDGGAVGPAD 181
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
A+++A +G++R+ D P+ GQG + +E + + + ++ I+
Sbjct: 182 ALIMARSGLERVGLSDRASFDFAAADMLPAVGQGIVAVECPSLDWETRRILATIDDGAAR 241
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
+ ER L L+G C S IAGFA G + VL DG F E R G
Sbjct: 242 SCADAEREVLWVLNGHCNSPIAGFATIDGDQMTLTASVLDEDGGRFIEAQRAGPADRPRE 301
Query: 288 IGR 290
+GR
Sbjct: 302 LGR 304
>gi|47206204|emb|CAF91821.1| unnamed protein product [Tetraodon nigroviridis]
Length = 385
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 134/293 (45%), Gaps = 56/293 (19%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P ++ I+ +ST GD+I + L++IG K LFT+E+E L E+D VHS KD+PT L
Sbjct: 20 PDVHLEIVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPP 79
Query: 94 GLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150
G I A L RE+ D + H ++L L HSVIGTSSLRR A L + + D
Sbjct: 80 GFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGTSSLRRAAQLKKRFPHLDFKDI 139
Query: 151 ------------------------RGKIETRLNKLNNNKA-HAILLAYAGIKRLKKEKVI 185
RG + TRL KL+ + AI+LA AG++R+ + I
Sbjct: 140 VSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKEDFAAIILAAAGLRRMGWDNRI 199
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL----- 240
+IL ED + GQGA+ +E + E+V V++ DT ERAFL L
Sbjct: 200 SQILEPEDCMYAVGQGALAVEVRAKDADILEMVSVLHDPDTVLRCIAERAFLKHLVQHTH 259
Query: 241 -----------------------DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
+G C +A K S LY G V + DG
Sbjct: 260 THTHTHTHTRSLAVAHWNLFCLQEGGCSVPVAVHTKVKDSQLYLTGAVYSLDG 312
>gi|255715311|ref|XP_002553937.1| KLTH0E10604p [Lachancea thermotolerans]
gi|238935319|emb|CAR23500.1| KLTH0E10604p [Lachancea thermotolerans]
Length = 336
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 141/280 (50%), Gaps = 13/280 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E + RIG R S LA+ + E + + + ++ + L T GD++ ++ L GGK
Sbjct: 10 EHQIVRIGGRKSKLAVIQSHEVKDLIE--REFSQYSCTVRALKTLGDQVQSKPLYSFGGK 67
Query: 62 GLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHT 114
++T+E+E L + ID VHS KDMPT L G + A + R D D I
Sbjct: 68 AVWTKELEDLLYEKDKEKRIDLIVHSLKDMPTLLPDGFLVGAIIKRVDPTDCIIMAKESP 127
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLA 172
++L DL SV+GTSS+RR A L R + RG IETRL+KL++ I+LA
Sbjct: 128 YKTLDDLPDGSVVGTSSIRRSAQLKRKYPKLVFESVRGNIETRLSKLDDPITPFSCIVLA 187
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ R+K I + L+ + GQGA+ IE ++P +++ IN ++T
Sbjct: 188 TAGLLRVKLAHRITQRLDSSVMYHAVGQGALGIEIRSDDPWIAGILQKINDKETAICCFA 247
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDG 270
ER+ + L+G C I + +T L +V++ DG
Sbjct: 248 ERSLMRTLEGGCSVPIGVESNYDDTTKQLCLKAVVVSVDG 287
>gi|212529280|ref|XP_002144797.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC
18224]
gi|210074195|gb|EEA28282.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC
18224]
Length = 336
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 142/281 (50%), Gaps = 14/281 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F+IGTR S LALA +L K P ++ I T GDR ++ K
Sbjct: 10 ERKCFKIGTRKSKLALAQTDLVVEALK--KKYPQYDFNIETKDTAGDRDKITAFKDMTSK 67
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
L+TEE+E+ LI G+ID VHS KD+PT L + LPRED RDV I SL
Sbjct: 68 NLWTEELEELLIGGQIDFIVHSLKDVPTILPPTCALGGVLPREDPRDVLIVKPGLPYTSL 127
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L + V RG IETRL KL+ + I+LA AG+
Sbjct: 128 SELPAGSVVGTSSIRRTAQLAMKFPHLKVQSVRGNIETRLAKLDAEDGPFTCIILAAAGL 187
Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R I + L+ + + GQGAI IE ++ +++ + + T+ V ER
Sbjct: 188 LRTGMGGRITQYLDSKSGSLLYAVGQGAIGIEIRSDDALVLDMLNNVGDQKTFKEVLTER 247
Query: 235 AFLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDG 270
+ L ++G C + + G+T L+ I+++ DG
Sbjct: 248 SLLRSIEGGCSAPLGVESEWVEDADGTTKLHVRSIIVSVDG 288
>gi|325108657|ref|YP_004269725.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305]
gi|324968925|gb|ADY59703.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305]
Length = 329
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 17/304 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A + L H P N+ ++ +ST+GD L +GG G+FT
Sbjct: 8 VRIATRSSELALWQATHVAALLRAEH--PDINVELVDVSTQGDADQRAPLWSMGGTGVFT 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLK-GLQISAYLPREDIRDVFISHT--------AQ 116
+E+++ ++ G D AVHS KD+PT+++ L ++A RE D + A
Sbjct: 66 KEVQRTVLDGMADLAVHSLKDLPTEIVDPDLTLAAVPEREQRWDALVLRNDLKGDVDPAD 125
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L L + IG+ SLRR+A L R D+ +++ RG + TRL KL+ + AI+LA AG+
Sbjct: 126 PLASLQDGARIGSGSLRRRAQLRAQRPDLKLLEIRGNLNTRLRKLDEGEYDAIILATAGL 185
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + + L P+ GQGA+ +E ++ + ++L++ +N + + + ER
Sbjct: 186 LRLGWNERLSCRLQPPVMFPAVGQGALGLECRTDDEQTRKLLESLNDPEARLATHAERRL 245
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L L C + + +VL+ DG H+V D++++G D A +
Sbjct: 246 LNSLRAGCHAPVGVNCERAEGRFTLSSVVLSPDGA--HQVDAE----DSVDLGDDWANWQ 299
Query: 297 RFIS 300
+S
Sbjct: 300 EKLS 303
>gi|126460312|ref|YP_001056590.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548]
gi|158513494|sp|A3MWV7|HEM3_PYRCJ RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|126250033|gb|ABO09124.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548]
Length = 296
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 148/302 (49%), Gaps = 12/302 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L +T+ L V + P ++ + T GD + +R L +IG KG+F
Sbjct: 3 IRVATRGSKLSL---LQTQELLDQVKAVEPKVEFELVVVKTTGDVVQDRPLYQIGVKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D AVHS KD+P++L GL I+ + R DV S SL L
Sbjct: 60 EKEVNLAVLRGEADVAVHSLKDLPSELTPGLVIAGFSRRAPPYDVVASREGYSLYTLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183
+V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG+ RL E
Sbjct: 120 AVVGTSSVRRAEFLRAVRPDVEVRPLRGNVDTRVGKILSGQYDAAIMAMAGLVRLYGWEA 179
Query: 184 VIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+K + E+ PP PGQG + ++++ + ER FL +
Sbjct: 180 PVKLSPIRPEEIPPPPGQGIVVAVVKEGEAWLIDILRRASDRRAAVEATAEREFLMHVGA 239
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C A+ G A Y G + G AS G+ + + G D +GR AA+ IR I
Sbjct: 240 GCHVAVGGLARYEDGGMSFVAG--YASGGRRYV-IKLWGE--DPREVGRRAAEEIRKIRE 294
Query: 302 KN 303
+
Sbjct: 295 GD 296
>gi|170096450|ref|XP_001879445.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645813|gb|EDR10060.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 340
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 130/264 (49%), Gaps = 9/264 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K IG R S LA A RS L + P I I +TE GG
Sbjct: 15 EQKAIVIGCRPSTLAKIQAELVRSRLKVL--FPASRFEISSKKFPQPEIGTSQITERGGA 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
L+T E+E L G+ID VHS KD+PTKL +G +I L RED RD + ++L
Sbjct: 73 SLWTTELEDALFDGDIDILVHSLKDVPTKLKEGCEIIHVLEREDRRDCLVVKDGLPYRTL 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176
++L SV+GT S+RR A + R + + D RG I+TRL KL++ A++LA AG+
Sbjct: 133 EELPAGSVVGTGSVRRVAQMKRRYPLLVIKDVRGNIDTRLQKLDSPDLPYTALILASAGL 192
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERA 235
RL I L+ P+ GQG + E + K + +V + +D W +V ERA
Sbjct: 193 LRLSLHDRITSYLSPPISYPAVGQGCLGAEFRSADTKVKAMVSRLEVWQDGW-AVRAERA 251
Query: 236 FLAELDGSCKSAIAGFAYCKGSTL 259
L L+G C + ++ G +
Sbjct: 252 LLWVLEGGCAFPVGIWSSWSGDNI 275
>gi|289581680|ref|YP_003480146.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099]
gi|289531233|gb|ADD05584.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099]
Length = 378
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 147/321 (45%), Gaps = 60/321 (18%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LA A + +L + + + ++ + T GD+I + + +G G F
Sbjct: 7 LRLATRGSTLARRQATLVKEALENRR----YEVELVTVETTGDQIRDELIHRLGKTGAFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++++++ G++D A+HS KDMPT+ L +A R D I+ +L++L +
Sbjct: 63 RELDERVLEGDLDGAIHSMKDMPTEQPDDLVTAAVPERGRPGDYLITPEGATLEELPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------NNNKAHA--------- 168
+GTSSLRR+A LL R D++V RG ++TRL KL + ++ A
Sbjct: 123 TVGTSSLRRRAQLLSERPDLTVEPLRGNVDTRLEKLLAPSLQAEHEERSEADKERKGNTG 182
Query: 169 -----------ILLAYAGIKRLKKEKVIKEI----------------------LNIEDFP 195
+ + G+ L+K+ + +E+ ++ ++ P
Sbjct: 183 EEDFEPEFDQTVDEWFDGLSELEKQALGREVETEYDAIVLAQAGLVRSGLDHYVDAQELP 242
Query: 196 -----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
P+PGQGA+ + T + A E+ I+H + ER LAEL G C + I
Sbjct: 243 TGTFVPAPGQGALAV-TATDGETATEIQSAIDHPRSRVETTVERTVLAELGGGCIAPIGI 301
Query: 251 FAYCKGSTLYFYGIVLASDGK 271
+A +G ++ V DG+
Sbjct: 302 YAIVQGEYVHATVSVFNRDGE 322
>gi|330835713|ref|YP_004410441.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4]
gi|329567852|gb|AEB95957.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4]
Length = 289
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 133/264 (50%), Gaps = 14/264 (5%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RI R S L++ ET SS ++ + I + T+ D + L EIG KG+F +
Sbjct: 4 RIAARGSRLSVKQ-VETVSSYLNSRG---YETEFIEVKTRADLFSGTPLHEIG-KGVFDK 58
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+ + ++ G+ D AVHS KD+ + L +GL+I A RE+ DV +S L+++ S
Sbjct: 59 EVNEAVLIGKADLAVHSMKDL-SALPEGLKILATPRRENPSDVLVSD--YELQEMPAGSK 115
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT SLRR L R D+ VI+ RG ++TR+ K + I+LA AG+ RL V +
Sbjct: 116 IGTGSLRRTNFLKVLRPDLQVINLRGNVDTRIRKYLTREYDGIILAEAGLVRLGI-NVKR 174
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L++ DF P QG I I V P EL+K +N E T ER + + G C S
Sbjct: 175 HELDVHDFTPEANQGIIAI---VGRPHLTELLKELNDEATMTVARAEREVVKVIGGGCHS 231
Query: 247 AIAGFAYCKGSTLYFYGIVLASDG 270
+ + L GI SDG
Sbjct: 232 PLGVLFQMEDDRL--TGIASYSDG 253
>gi|333024831|ref|ZP_08452895.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
gi|332744683|gb|EGJ75124.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
Length = 308
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 26/249 (10%)
Query: 47 GDRITNRTLTEIG----------------GKGLFTEEIEKKLISGEIDCAVHSAKDMPTK 90
G R R +TE G G F+ E L+ GE+D VH KD+PT
Sbjct: 33 GARFVRRVITEAGDADRSTPTVAGVTRRAGASAFSSRQEAALVRGEVDVVVHCLKDLPTA 92
Query: 91 LLKG-LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
G + + PRED+RD T L L + +GT S RR A +L R D+ V+
Sbjct: 93 PAPGTVLLRTPGPREDVRDALCGAT---LAGLPTGARVGTGSTRRVAQMLALRPDLEVVP 149
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG + RL + A++LA AG+ RL I E L+ E +PP+PGQGA+ I+
Sbjct: 150 VRGNVPARLAR--TRTLDAVVLAAAGLHRLGLADEITEYLDPEAYPPAPGQGALAIQVRE 207
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLAS 268
++ +A L+ T V ER LAEL G C + + TL + V
Sbjct: 208 DS-EAARLLAASGDAATDAEVRAERVLLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTP 266
Query: 269 DGKIFHEVS 277
DG H+++
Sbjct: 267 DGT--HQIA 273
>gi|121591883|ref|ZP_01679047.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121546249|gb|EAX56552.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
Length = 195
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%)
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
A +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 4 ASGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLEL 63
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 64 ESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQ 123
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 124 GGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGA 183
Query: 302 KNVFN 306
K +
Sbjct: 184 KEILE 188
>gi|315049563|ref|XP_003174156.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311342123|gb|EFR01326.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 312
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 136/277 (49%), Gaps = 36/277 (12%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A RS L + P H I L T GD+ N L G K L+
Sbjct: 12 PLRIGTRRSNLAVIQAKTIRSQLEKIA--PEHTFEIEALHTLGDKDQNSALYNFGAKDLW 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121
T E+E+ L SG++D VH KDMPT+L ++A R+D RD + SL+ L
Sbjct: 70 TTELEELLTSGKLDIVVHCLKDMPTQLPDSCDLAAIPLRDDPRDALVIKAGLPYTSLQTL 129
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179
+++GTSS+RR A L R + ++ RG +ETRL KL++ K+ I+++ G++
Sbjct: 130 PEGAIVGTSSVRRSAQLRRLFPHLRFMNIRGNVETRLAKLDDPKSEYICIVMSACGLEL- 188
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV-KVINHEDTWDSVNC--ERAF 236
GQGAI +E + K L ++++H+ S+ C ER+
Sbjct: 189 -------------------GQGAIGLEVRKGDAKILRLTDQLLDHK---SSLACLAERSL 226
Query: 237 LAELDGSCKSAIA---GFAYCKGSTLYFYGIVLASDG 270
+ L+G C I + +TL IV++ DG
Sbjct: 227 MRTLEGGCSVPIGVETEWIDKPDATLRIRAIVVSIDG 263
>gi|67989478|ref|NP_001018179.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe 972h-]
gi|12644400|sp|Q09899|HEM3_SCHPO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|5834802|emb|CAB55280.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe]
Length = 336
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 145/284 (51%), Gaps = 27/284 (9%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG---GK 61
F IGTR S LA+ + R L K PH II T GD I ++ L E K
Sbjct: 7 FPIGTRKSKLAVIQSEIIREEL---EKHYPHLEFPIISRDTIGDEILSKALFEFKRQLAK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117
L+T E+E L++ + VHS KD+P+++ G+ I+ R D + SH ++
Sbjct: 64 SLWTRELEALLVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIVFKAGSHY-KT 122
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ DL SV+GTSS+RR+ALL R + +D RG + TRL KL+ +++ ++LA AG
Sbjct: 123 VADLPPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAG 182
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + I ++L + GQGA+ +E ++ + E++K + H++T + ERA
Sbjct: 183 LFRLGLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERA 242
Query: 236 FLAELDGSCK---------SAIAGFAYCKGSTLYFYGIVLASDG 270
+ L G C AI+ +Y + G VL++DG
Sbjct: 243 LMKRLQGGCAIPIGVQTDVLAISNSSY----RISLLGTVLSADG 282
>gi|296118431|ref|ZP_06837010.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM
20306]
gi|295968572|gb|EFG81818.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM
20306]
Length = 300
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 9/291 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LA A R + D P + I+ +T GD N E G G+FT
Sbjct: 6 KIGTRGSKLATTQAGHVRDWITDNGT--PSELHIV--TTAGD--VNMAPVERIGVGVFTH 59
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALHS 125
+ + L E D AVHS KD+PT + + +P RED R+ I+ +L DL +
Sbjct: 60 ALREALHEQECDIAVHSFKDLPTAPDERFHL--IVPKREDNREALIARDGLTLDDLPEGA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG IETR++ + N + A++LAYAG+ R
Sbjct: 118 KVGTSAPRRISQLKAMRPDLDIRPLRGNIETRMSYVTNGELDAVMLAYAGLVRAGYADRA 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + + P+P QGA+ +E + + + V I ERA L L+ C
Sbjct: 178 TQVFSPDVLMPAPAQGALAVEVNAQDAELVNAVNAIADAKAGLQAAGERAILRRLEAGCT 237
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A + + + +G V DG S G ++ +G A+ +
Sbjct: 238 APVAATSVIEDDLITVHGGVFQLDGSRQAVASETGPLENSYELGIKVAEAL 288
>gi|322371455|ref|ZP_08046004.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253]
gi|320548987|gb|EFW90652.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253]
Length = 366
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 61/330 (18%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LA+ + E +++L D ++ ++ + T GD++ + +TE+G G F
Sbjct: 8 LRLATRGSDLAIRQSGEVKAALEDRR----FSVELVEVETTGDQLDDALITELGKTGAFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++++++ E+D A+HS KDMPT L ++A R DV ++ + + L +
Sbjct: 64 RNLDQEVLDEEVDGAIHSMKDMPTDHPDELVVAAVPERASANDVLVTPDGKPIDALPDGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISV------IDFR---------------------------G 152
V+GTSSLRRKA LL +R D++V +D R G
Sbjct: 124 VVGTSSLRRKAQLLNFRPDLTVKPLRGNVDTRIEKLLAPVLQAEHEERTEEEKERKGHVG 183
Query: 153 K-----------IETRLNKLNNNKAHA-----------ILLAYAGIKRLK-KEKVIKEIL 189
K I+ N L+ + A I+LA AG++R V + L
Sbjct: 184 KKDSYEFPYDKTIDEWFNDLSEVERRALERDIETEYDGIVLAEAGLQRSGLAHHVEYDRL 243
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ F P+PGQGA+ + T ++ AQ+L V++H T ER L EL+G C + I
Sbjct: 244 PPKQFVPAPGQGALAVMT-LDGELAQDLHTVLDHPRTRVETTVERTILRELNGGCIAPIG 302
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
+ +G ++ V + DG + R+
Sbjct: 303 VHSIIQGENVHVEAQVFSQDGSEVISIKRD 332
>gi|300709477|ref|YP_003735291.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3]
gi|299123160|gb|ADJ13499.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3]
Length = 379
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 149/327 (45%), Gaps = 58/327 (17%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+ TR S LALA A + +L + + ++ + T GDRI + + +G G F
Sbjct: 7 PIRLATRGSDLALAQAESVKRALSGRRR----EVELVTVETTGDRIDDELIHRLGKTGAF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+++K+++G+++ A+HS KDMPT+ + L ++A R D ++ + L +L
Sbjct: 63 VHSLDEKVLAGDVEGAIHSMKDMPTEESQ-LVVAAVPERATAGDRLVTPDGKPLAELPEG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------NNNKAH- 167
+ +GT SLRR A LL R D++V RG ++TR+ KL KA+
Sbjct: 122 ATVGTGSLRRGAQLLAQRPDLTVEPLRGNVDTRVEKLLSKSLNEEYDRRVAADEQRKANT 181
Query: 168 ----------------------------------AILLAYAGIKRLKKEKVI-KEILNIE 192
AI+LA AG++R ++ I L E
Sbjct: 182 DDDFEPEFDRRPEEWIEGLSERERQAFERSESFDAIVLAAAGLERSGLDREIPTSDLPTE 241
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
F P+ GQGA+ + T + A+E+ + ++H + ER LA L G C + I A
Sbjct: 242 SFVPAAGQGALAV-TMADGDLAREVNEALDHPRSRVETTVERTVLATLGGGCVAPIGIHA 300
Query: 253 YCKGSTLYFYGIVLASDGKIFHEVSRN 279
+G + VLA G+ V+R+
Sbjct: 301 VIQGEHVRTRVQVLARGGEPTISVTRD 327
>gi|172039905|ref|YP_001799619.1| hypothetical protein cur_0225 [Corynebacterium urealyticum DSM
7109]
gi|171851209|emb|CAQ04185.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 316
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 136/268 (50%), Gaps = 13/268 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGKGLFT 65
+GTR S LA A R ++D +IV P GD + + + ++G G+FT
Sbjct: 9 VGTRGSTLATTQAGHVRQGMIDAGYDAELHIVHTP----GDASQASQIPVAKVG-VGVFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124
E + L E D AVHS KD+PT + A +P R D R+V IS + L +L
Sbjct: 64 ETLRTALDERECDVAVHSFKDLPTA--PDARFRAVVPKRVDSREVLISVDNKKLMELPEG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I TR+ ++ ++ A++LA AG++R+
Sbjct: 122 AKVGTSAPRRVSQLRALRPDLQILPLRGNIGTRMGRVGDD-LDAVILARAGLERVGWLDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E ++ E P+P QGA+C+E ++ +A V NH ++ V ER L+ L+ C
Sbjct: 181 AAESIDPELILPAPAQGALCVEVRADDEEAWNSVADQNHTPSYACVVSERTVLSTLEAGC 240
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDG 270
+ +A A + + L G V A DG
Sbjct: 241 SAPVAAHATLNEQQNQLTVTGGVFAIDG 268
>gi|318057211|ref|ZP_07975934.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG]
gi|318079308|ref|ZP_07986640.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF]
Length = 314
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 26/249 (10%)
Query: 47 GDRITNRTLTEIG----------------GKGLFTEEIEKKLISGEIDCAVHSAKDMPTK 90
G R R +TE G G F+ E L+ GE+D VH KD+P
Sbjct: 39 GTRFVRRVITEAGDADRSTPTVAGVTRRAGASAFSSRQEAALVRGEVDVVVHCLKDLPNA 98
Query: 91 LLKG-LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
G + + PRED+RD T L L + +GT S RR A LL R D+ V+
Sbjct: 99 PAPGTVLLRTPGPREDVRDALCGAT---LAGLPTGARVGTGSTRRVAQLLALRPDLEVVP 155
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG + RL + A++LA AG+ RL I E L+ E +PP+PGQGA+ I+
Sbjct: 156 VRGNVPARLAR--TRTLDAVVLAAAGLHRLGLADEITEYLDPEVYPPAPGQGALAIQVRE 213
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLAS 268
++ +A L+ T V ER LAEL G C + + TL + V
Sbjct: 214 DS-EAARLLAASGDAATDAEVRAERVLLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTP 272
Query: 269 DGKIFHEVS 277
DG H+++
Sbjct: 273 DGT--HQIA 279
>gi|302521530|ref|ZP_07273872.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
gi|302430425|gb|EFL02241.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
Length = 331
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 10/225 (4%)
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG-LQISAYLPREDIRDVFISH 113
+T G F+ E L+ GE+D VH KD+PT G + + PRED+RD
Sbjct: 80 VTRRAGASAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDALCGA 139
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
T L L + +GT S RR A LL R D+ V+ RG + RL + A++LA
Sbjct: 140 T---LAGLPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLAR--TRTLDAVVLAA 194
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
G+ RL I E L+ E +PP+PGQGA+ I+ ++ +A L+ T V E
Sbjct: 195 VGLHRLGLADEITEYLDPEAYPPAPGQGALAIQVREDS-EAARLLAASGDAATDAEVRAE 253
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS 277
R LAEL G C + + TL + V DG H+++
Sbjct: 254 RVLLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGT--HQIA 296
>gi|295836866|ref|ZP_06823799.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197699525|gb|EDY46458.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 335
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 103/218 (47%), Gaps = 8/218 (3%)
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISH 113
+T G F+ E L+ E+D VH KD+PT G + PRED RD
Sbjct: 84 VTRRAGVSAFSSRQEAALVRREVDVVVHCLKDLPTTPAPGTALLRTPGPREDARDALCGA 143
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
T L L + +GT S RR A LL R D+ VI RG + RL +L A++LA
Sbjct: 144 T---LAGLPRGARVGTGSTRRVAQLLALRPDLEVIPVRGNVPARLARLRT--LDAVVLAA 198
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ RL + I E L+ E +PP+PGQGA+ I+ + A L+ T V E
Sbjct: 199 AGLHRLGLTEEITEYLDPEAYPPAPGQGALAIQVREGS-GAARLLAASGDPATDTEVRAE 257
Query: 234 RAFLAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDG 270
R LAEL G C + + + TL + V A DG
Sbjct: 258 RVLLAELHGGCSVPLGTWTSRPSPGTLRLHAAVTAPDG 295
>gi|307699958|ref|ZP_07637009.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16]
gi|307614996|gb|EFN94214.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16]
Length = 360
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 30/269 (11%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIGGK 61
++P IGTR S LAL +TR D+ + + I T+GD TNR +L+ +GG
Sbjct: 8 QRPLVIGTRGSKLALT---QTRMVAADLEQ-RGLAVRIETFVTEGD--TNRASLSSLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK------------LNNNKA--- 166
+ +GT S RR L R D+S++D RG + TR+ + L+ +A
Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181
Query: 167 -HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219
A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++
Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLR 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAI 248
+++ E T V+ ERA L L+ C + +
Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPL 269
>gi|296109592|ref|YP_003616541.1| porphobilinogen deaminase [Methanocaldococcus infernus ME]
gi|295434406|gb|ADG13577.1| porphobilinogen deaminase [Methanocaldococcus infernus ME]
Length = 287
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 136/272 (50%), Gaps = 18/272 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LAL A L + I+ T+GD+I +R L IG G+FT+E
Sbjct: 3 IGSRGSKLALYQANLVLKKLKSLGIDGEVKII----KTRGDQIKDRALHSIG-IGVFTKE 57
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ L++ EID AVHS KD+PT L L R+ D+ I++ + +K VI
Sbjct: 58 LDLSLLNHEIDIAVHSLKDIPTVWNSRLSY-VVLERDYPNDLLIANK-EDIK------VI 109
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A L D RG ++TRL KL +N+ AI+L+ AG++RL + + E
Sbjct: 110 GTSSLRRRAFLKELYRDAEFKLLRGNVDTRLRKLKDNEYDAIVLSEAGVRRLNID--LSE 167
Query: 188 ILNIEDFP--PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L + P P+PGQG I + + K + +++ IN + T+ ER L EL C
Sbjct: 168 FL-VYKLPILPAPGQGVIAVAYRKEDEKIKNILEKINDKKTFLETTAERKALNELGCGCH 226
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
FA +G L V D I E S
Sbjct: 227 VPFGAFAKYEGKRLMLKVAVANKDRVIKKESS 258
>gi|227876587|ref|ZP_03994697.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243]
gi|227842788|gb|EEJ52987.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243]
Length = 360
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 30/269 (11%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIGGK 61
++P IGTR S LAL +TR D+ + + I T+GD TNR +L+ +GG
Sbjct: 8 QRPLVIGTRGSKLALT---QTRMVAADLEQ-RGLAVRIETFVTEGD--TNRASLSSLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK------------LNNNKA--- 166
+ +GT S RR L R D+S++D RG + TR+ + L+ +A
Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181
Query: 167 -HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219
A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++
Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLR 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAI 248
+++ E T V+ ERA L L+ C + +
Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPL 269
>gi|299132980|ref|ZP_07026175.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
gi|298593117|gb|EFI53317.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
Length = 325
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 142/308 (46%), Gaps = 22/308 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S +A+A E L V + I+ T GD L+ GG
Sbjct: 1 MASDRLRIGTRKSAMAIAQTEEIARRLKAVGT----EVEIVKFETMGDIDQAGKLSPHGG 56
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG F +I + +++G + A+HS KD+P + GL I A L R+ DV + S+
Sbjct: 57 KGGAFVAQIREAVLNGRLHAAMHSLKDVPGNEDTPGLVIGAALSRDPPGDVLVLRPGTSV 116
Query: 119 KDLALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163
+L IGT+S+RR A + R +I VI FRG ++R+ KL+
Sbjct: 117 DELKRTRGKGFEIGTNSVRRAAYVRRLFPEIEVIHFRGAADSRVRKLDQRAKQKLPDGGA 176
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A +G++R+ + I +I + P+ GQG + +E + + + ++ I+
Sbjct: 177 VGPADALIMARSGLERVGLKSRIAYEFSIAEMLPAVGQGIVAVECAARDFETRYILSAID 236
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ ER L L+G C S IAGFA G+ + VL G E SR G
Sbjct: 237 DASAHACADAEREVLWVLNGHCNSPIAGFAEIMGTEMQLAASVLDHAGSRIIEASRVGCA 296
Query: 283 CDAINIGR 290
+GR
Sbjct: 297 SRPRELGR 304
>gi|269977777|ref|ZP_06184737.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1]
gi|269934081|gb|EEZ90655.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1]
Length = 360
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 30/269 (11%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIGGK 61
++P IGTR S LAL +TR D+ + + I T+GD TNR +L+ +GG
Sbjct: 8 QRPLVIGTRGSKLALT---QTRMVAADLEQ-RGLAVRIETFVTEGD--TNRASLSSLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK------------LNNNKA--- 166
+ +GT S RR L R D+S++D RG + TR+ + L+ +A
Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181
Query: 167 -HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219
A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++
Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLR 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAI 248
+++ E T V+ ERA L L+ C + +
Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPL 269
>gi|153865130|ref|ZP_01997767.1| Porphobilinogen deaminase [Beggiatoa sp. SS]
gi|152145375|gb|EDN72233.1| Porphobilinogen deaminase [Beggiatoa sp. SS]
Length = 211
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
+ RE+ D F+S+T +L L +++GTSSLRR++ LL R D+ + RG + TRL+K
Sbjct: 1 MRREEPFDAFVSNTYATLAALPEGAIVGTSSLRRQSQLLAHRPDLQIRSLRGNVGTRLSK 60
Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
L+N AI+LA G+KRL + I+EI++ P+ GQGAI IE ++ + ++ +
Sbjct: 61 LDNGDYDAIVLAAVGLKRLGLVERIREIIDSTIMLPAIGQGAIGIECRQDDLETRQHIDN 120
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRN 279
+N DT D V ERA L+G C+ IAG+A + S L G+V +G+ +
Sbjct: 121 LNDPDTQDCVIAERALNESLEGGCQVPIAGYAEIQSSENLTMRGLVGDIEGQHILRHNLQ 180
Query: 280 GNRCDAINIGRDAAQYI 296
G R A +G+ A+ +
Sbjct: 181 GARHLAAELGKSLAKVL 197
>gi|257387166|ref|YP_003176939.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286]
gi|257169473|gb|ACV47232.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286]
Length = 377
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 60/321 (18%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LAL A +++ + + + + I+ + T GD+I + + +G G F
Sbjct: 7 VRLATRGSDLALRQA----ATVTETLEARGYTVEIVEVETTGDQIRDELIHRLGKTGAFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++++++ GE+D AVHS KD+PT+ + L ++ RE DV ++ ++ +L +
Sbjct: 63 RSLDEQVVDGEVDAAVHSMKDVPTEQPEELVVAGVPQRESPDDVLVTPDGATVDELPDGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------NNNKAHA--------- 168
+GTSSLRRKA LL R D+ V RG ++TR+ KL + ++ A
Sbjct: 123 TVGTSSLRRKAQLLAERPDLDVQPLRGNVDTRIEKLLAPTLQSEHEERSEAEKEQKEKVD 182
Query: 169 -----------ILLAYAGIKRLKKEKVIKEILNIED------------------------ 193
+ + G+ ++++ + +E+ D
Sbjct: 183 DEEYEFPYEQDVETWFDGLTEIERQALGREVETAYDAVVLARAGLERAGLLHHVEYQSLP 242
Query: 194 ---FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
F P+PGQGA+ + T ++ A+EL ++H + ER L EL G C + +
Sbjct: 243 TGTFVPAPGQGALAV-TATDDEFARELNDALDHPRSRAETTVERTVLDELGGGCVAPLGV 301
Query: 251 FAYCKGSTLYFYGIVLASDGK 271
A +GS + VL G+
Sbjct: 302 HAILQGSVIRTTVRVLDQAGE 322
>gi|169869297|ref|XP_001841215.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130]
gi|116497683|gb|EAU80578.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130]
Length = 351
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 7/216 (3%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ST GD+ ++ L +GGK L+T+E+E L E+D VHS KD+PT L +G + A L
Sbjct: 52 MSTAGDKNQSQALYLMGGKALWTKELEVALKDKEVDMLVHSLKDVPTTLPEGCLLGAILE 111
Query: 103 REDIRDVFISHTA-----QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
RED D + +SL+DL SV+GTSS+RR A L R + +D RG + TR
Sbjct: 112 REDPVDALVVKKGKEGVWKSLEDLPEGSVVGTSSVRRVAQLKRKFPGLRFLDVRGNLNTR 171
Query: 158 LNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
L KL+ + A++LA AG+ RL I LN + QGA+ +E ++ ++
Sbjct: 172 LAKLDAEDGPYAALILAKAGLVRLGWGDRITADLNPPTLYHAVSQGALAVEIRDDDLESL 231
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251
E+++ + H T ERA L L+G C + +
Sbjct: 232 EILQKLTHRGTDWKCRAERALLRVLEGGCSVPVGVY 267
>gi|168705543|ref|ZP_02737820.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246]
Length = 140
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGPKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWR 142
L L S++GTSSLRR+A LL R
Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRR 140
>gi|284166931|ref|YP_003405210.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511]
gi|284016586|gb|ADB62537.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511]
Length = 380
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 149/329 (45%), Gaps = 60/329 (18%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LA A + +L D + + ++ + T GD+I + + +G G F
Sbjct: 7 LRLATRGSTLARRQASLVKEALEDRR----YEVELVTVETTGDQIRDELIHRLGKTGAFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++++++ G++D AVHS KDMPT+ + L +A R DV I+ +L++L +
Sbjct: 63 RELDERVLEGDLDGAVHSMKDMPTEQPQDLVTAAVPERGPPGDVLITPDGSTLEELPDGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAILLAYAG 175
+GTSSLRR+A LL R D+ V RG ++TRL KL ++A AG
Sbjct: 123 TVGTSSLRRRAQLLSERPDLEVEPLRGNVDTRLEKLLAPSLQEEHQERSEADKERKGNAG 182
Query: 176 ------------------IKRLKKEKVIKEI----------------------LNIEDFP 195
+ L+++ + +E+ ++ + P
Sbjct: 183 DDDYEPEYDRTVDEWFDDLSELERQAMEREVETEYDAIVLAQSGLERSGLAHSVDYRELP 242
Query: 196 -----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
P+PGQGA+ + T + A+++ I+ + ER LAEL G C + +
Sbjct: 243 TGTFVPAPGQGALAV-TARDGETARDIQSAIDFPRSRVETTVERTILAELGGGCIAPVGI 301
Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
+A +G ++ V DG+ E SR+
Sbjct: 302 YAVVQGEYVHATVNVFDRDGEESVEGSRD 330
>gi|260579339|ref|ZP_05847221.1| porphobilinogen deaminase (hydroxymethylbilanesynthase)
(Pre-uroporphyrinogen synthase) [Corynebacterium
jeikeium ATCC 43734]
gi|258602468|gb|EEW15763.1| porphobilinogen deaminase (hydroxymethylbilanesynthase)
(Pre-uroporphyrinogen synthase) [Corynebacterium
jeikeium ATCC 43734]
Length = 359
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGKGL 63
F IGTR S LA R + ++V P GD + + +IG G+
Sbjct: 27 FLIGTRRSALATTQTSHVRDGMQSAGYAAELHLVHTP----GDASQAAQIPVAQIG-VGV 81
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE-DIRDVFISHTAQSLKDLA 122
FTE + K L +GE D AVHS KD+PT + +PR D R+V +S Q L +L
Sbjct: 82 FTETLRKALEAGECDVAVHSFKDLPTA--PDPRFRTVVPRRVDPREVLVSRNNQPLLELP 139
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTS+ RR + + R D+ ++ RG I+TR+ + + A++LA AG++R+ +
Sbjct: 140 QGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGRTEKD-LDAVVLARAGLERVGQL 198
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L+
Sbjct: 199 ERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTLEA 258
Query: 243 SCKSAIAGFAYC-----------KGSTLYFYGIVLASDG 270
C + +A ++ K L +G V A DG
Sbjct: 259 GCTAPVAAYSEWVQQEGTAEGADKRYVLRVFGGVFAMDG 297
>gi|321253441|ref|XP_003192732.1| phorphobilinogen deaminase; Hem3p [Cryptococcus gattii WM276]
gi|317459201|gb|ADV20945.1| Phorphobilinogen deaminase, putative; Hem3p [Cryptococcus gattii
WM276]
Length = 481
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTL-------TEIGGKGLFTEEIEKKLISGEIDCAV 81
DV + P+ I ++T GDR L + K L+T+E+E +LI+G D V
Sbjct: 79 DVPFVHPYTFTIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLV 138
Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALL 138
HS KD+PT L G +I R D RD + + L+DL +V+GT S+RR A L
Sbjct: 139 HSLKDVPTVLKDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQL 198
Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
R ++ D RG + TR NKL+N ++ A++LA +G++RL L+
Sbjct: 199 KRAFPNLVFEDMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMH 258
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ GQGA+ IE +P+ + ++ + H T S ER L L+G C +
Sbjct: 259 AVGQGALAIEIRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVG 311
>gi|119587854|gb|EAW67450.1| hydroxymethylbilane synthase, isoform CRA_d [Homo sapiens]
Length = 321
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198
Query: 182 EKVIKEILNIEDFPPSPGQGAIC 204
+ +IL+ E+ + GQ C
Sbjct: 199 HNRVGQILHPEECMYAVGQEGGC 221
>gi|50291395|ref|XP_448130.1| hypothetical protein [Candida glabrata CBS 138]
gi|55976396|sp|Q6FNR4|HEM3_CANGA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49527441|emb|CAG61081.1| unnamed protein product [Candida glabrata]
Length = 329
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 147/307 (47%), Gaps = 23/307 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ IG R S LA+ + R + K P ++ + L T GD+I + L GG
Sbjct: 1 MTRESINIGGRRSKLAVVQSNHVRDLVQ--AKFPQYDCTVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SH 113
K L+T+E+E L + +D VHS KDMPT L G ++ R D D +
Sbjct: 59 KALWTKELEDYLYCEDQEKRLDLIVHSLKDMPTLLPDGFELGCVTKRVDPTDCIVMPRGS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILL 171
+ L DL +V+GTSS+RR A L R + RG I TRL KL++ + ++L
Sbjct: 119 PHRCLADLPEGAVVGTSSVRRSAQLKRKFPHLKYQSVRGNIHTRLEKLDDPEGPFQCLVL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + L+ + + GQGA+ IE + K +++ I D +V
Sbjct: 179 ASAGLVRMGLEDRITQRLHSDIMYHAVGQGALGIEIRQGDKKILQILDEIA--DLESTVC 236
Query: 232 C--ERAFLAELDGSCKSAI---AGFAYCKGSTLYFYGIVLASDGKIF----HEVSRNGNR 282
C ER+ + L+G C I + + + K L GIV+ +G + EV N R
Sbjct: 237 CLAERSLMRTLEGGCSVPIGVESSYDH-KTKKLLLKGIVVNVEGTMAIEDQQEVVVNDIR 295
Query: 283 CDAINIG 289
D+I G
Sbjct: 296 EDSIKCG 302
>gi|119587853|gb|EAW67449.1| hydroxymethylbilane synthase, isoform CRA_c [Homo sapiens]
Length = 304
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT
Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181
SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAIC 204
+ +IL+ E+ + GQ C
Sbjct: 182 HNRVGQILHPEECMYAVGQEGGC 204
>gi|58264690|ref|XP_569501.1| hydroxymethylbilane synthase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57225733|gb|AAW42194.1| hydroxymethylbilane synthase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 481
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTL-------TEIGGKGLFTEEIEKKLISGEIDCAV 81
DV + P+ I ++T GDR L + K L+T+E+E +LI+G D V
Sbjct: 79 DVPFVHPYTFSIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLV 138
Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALL 138
HS KD+PT L G +I R D RD + + L+DL +V+GT S+RR A L
Sbjct: 139 HSLKDVPTVLKDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQL 198
Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
R ++ D RG + TR NKL+N ++ A++LA +G++RL L+
Sbjct: 199 KRAFPNLVFEDMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMH 258
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ GQGA+ IE +P+ + ++ + H T S ER L L+G C +
Sbjct: 259 AVGQGALAIEIRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVG 311
>gi|18312026|ref|NP_558693.1| porphobilinogen deaminase [Pyrobaculum aerophilum str. IM2]
gi|25453025|sp|Q8ZYW7|HEM3_PYRAE RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|18159451|gb|AAL62875.1| porphobilinogen deaminase (hemC) [Pyrobaculum aerophilum str. IM2]
Length = 297
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 18/302 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++ TR S L+L +T L + + P + I + T GD + ++ L +IG KG+F
Sbjct: 3 LKVATRGSRLSL---LQTEEFLAQIKAVEPRVDFEIKIVKTTGDLVQDKPLFQIGVKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D A+HS KD+P+++ GL ++ + R D +S L+ L
Sbjct: 60 EKEVNLAVLKGEADIAIHSLKDLPSEISPGLVLAGFSKRTLPYDAVVSAVGYDLESLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+++GTSS+RR + R D+ + RG ++TR+ K+ K A ++A AGI RL E
Sbjct: 120 ALVGTSSVRRAEFIKSLRPDVRIEPLRGNVDTRVQKILQGKYDAAVMAAAGILRLYGESP 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V +L E PP PGQG + +L+K + ER FL +
Sbjct: 180 PVKLSLLRPELLPPPPGQGIVAAVVREGEGWLIDLLKKASDPRATVEALAEREFLKNVGA 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C A+ G A+ + + F AS K+F E D + +GR AA+ I+
Sbjct: 240 GCHVAVGGTAFSRNGYIEFIAGYAASGKRFVVKLFGE--------DPVEVGRRAAEEIKR 291
Query: 299 IS 300
++
Sbjct: 292 VA 293
>gi|306817540|ref|ZP_07451283.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239]
gi|304649582|gb|EFM46864.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239]
Length = 360
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 139/269 (51%), Gaps = 30/269 (11%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIGGK 61
++P IGTR S LAL +T+ D+ + + I T+GD TNR +L+ +GG
Sbjct: 8 QRPLVIGTRGSKLALT---QTQMVAADLEQ-RGLAVRIETFVTEGD--TNRASLSSLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK------------LNNNKA--- 166
+ +GT S RR L R D+S++D RG + TR+ + L+ ++A
Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQDRAKED 181
Query: 167 -HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219
A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++
Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLR 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAI 248
+++ E T V+ ERA L L+ C + +
Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPL 269
>gi|134109785|ref|XP_776442.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259118|gb|EAL21795.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 481
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTL-------TEIGGKGLFTEEIEKKLISGEIDCAV 81
DV + P+ I ++T GDR L + K L+T+E+E +LI+G D V
Sbjct: 79 DVPFVHPYTFSIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLV 138
Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALL 138
HS KD+PT L G +I R D RD + + L+DL +V+GT S+RR A L
Sbjct: 139 HSLKDVPTVLKDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQL 198
Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
R ++ D RG + TR NKL+N ++ A++LA +G++RL L+
Sbjct: 199 KRAFPNLVFEDMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMH 258
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ GQGA+ IE +P+ + ++ + H T S ER L L+G C +
Sbjct: 259 AVGQGALAIEIRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVG 311
>gi|313124929|ref|YP_004035193.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM
11551]
gi|312291294|gb|ADQ65754.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM
11551]
Length = 375
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 64/339 (18%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M++ R+ TR S LAL R +L D ++ ++ + T+GD+I + L +G
Sbjct: 1 MKRGTLRLATRGSDLALRQTASVRDTLADRR----FDVELVEVETRGDQIRDELLHRLGK 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F ++++++ E+D AVHS KDMPT+ + L ++ R DV ++ + ++
Sbjct: 57 TGAFVRALDERVLDEEVDAAVHSMKDMPTEHPRDLVVAGVPERAPANDVLLTPDGTAFEN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------NNN 164
L SV+GTSSLRRKA +L R D+ V RG ++TR+ KL ++
Sbjct: 117 LPAGSVVGTSSLRRKAQILSARPDLEVEPLRGNVDTRVEKLLAPTLQREHEARVDDDSDK 176
Query: 165 KAHAILLAYAG--------------------IKRLKKEK---------VIKEI------- 188
KA++ + +G I+R E+ V+ E
Sbjct: 177 KANSAEASASGEEYETDFDRTIEEWFDDLSEIERRSLERDVETEYDAIVLAEAGLKRSGL 236
Query: 189 ---LNIEDFPPS-----PGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + PP+ PGQGAI + ++ + ++ T + ER LAEL
Sbjct: 237 LHRVEYDRLPPTEFVPAPGQGAIAVTARRDHENLDRIQDALDDPRTRVTTTVERTVLAEL 296
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
G C + I A +G ++ VL++DG+ SRN
Sbjct: 297 GGGCIAPIGVHAKLQGEHVHVTARVLSTDGEEEVSASRN 335
>gi|164661463|ref|XP_001731854.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966]
gi|159105755|gb|EDP44640.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966]
Length = 530
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 128/233 (54%), Gaps = 20/233 (8%)
Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG--LFTEEIEKKLISGEIDCAVHSAKD 86
D + P + + ++T GD+ L IGG+G ++T+E+E L++G +D VHS KD
Sbjct: 147 DQKDVRPVDFPVRTMATLGDQNLKSPLYVIGGEGRAIWTKELEVALMAGGVDAIVHSLKD 206
Query: 87 MPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
+PT + G++++A L RED RD + + +SL+++ SVIGTSS+RR +LL R
Sbjct: 207 VPTTMPDGVELAAILEREDPRDALVVKENLPYKSLQEMPQGSVIGTSSVRRVSLLRRAYP 266
Query: 144 DISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201
+ D RG I TRL KL+ + A++LA AG+KR+ E I ++ + GQG
Sbjct: 267 HLMFSDVRGNINTRLAKLDAADGPYTALVLAAAGLKRMDLEHRITAYVSEPVMLHAVGQG 326
Query: 202 AICIETHVNNPKAQ---------ELVKVI-NHEDTWDSVNCERAFLAELDGSC 244
++ IE V P+ + +++ I N TW V ERA + ++G C
Sbjct: 327 SLAIE--VRTPRGESAERDERIRRMIRSISNWRATWRCV-AERALMHRMEGGC 376
>gi|332796306|ref|YP_004457806.1| porphobilinogen deaminase [Acidianus hospitalis W1]
gi|332694041|gb|AEE93508.1| porphobilinogen deaminase [Acidianus hospitalis W1]
Length = 292
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 127/247 (51%), Gaps = 8/247 (3%)
Query: 41 IPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100
I + TK D N L ++G KG+F +E+ + +I G D AVHS KD+ + L + L I A
Sbjct: 33 IGVKTKADLFVNEPLYKLG-KGVFEKEVNEYVIRGLADLAVHSMKDLTSNLSEELDILAT 91
Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
+ R+ DV +S + + DL SVIGTSS+RRK + R DI V D RG I+TR+ K
Sbjct: 92 VKRDSPYDVLVSK--KDVFDLDSGSVIGTSSIRRKNFMTFLRPDILVKDLRGNIDTRIKK 149
Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
+ + I++A A I RL + LN DF P QG I + N+ + ++L+
Sbjct: 150 YTSGEYVGIIIAEASILRLNL-NINYFKLNPIDFTPEANQGIIAVVGKKNDERTRKLLSE 208
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVSR 278
++ ++T++ ER+ + + G C S Y + GI S+G KI + R
Sbjct: 209 LHDQETFNEAIAERSTMEIVGGGCHSPFG--VYFEQIDDRLLGIASFSNGKKKITVTIER 266
Query: 279 NGNRCDA 285
GN D
Sbjct: 267 KGNPKDV 273
>gi|315047640|ref|XP_003173195.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311343581|gb|EFR02784.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 342
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 131/260 (50%), Gaps = 18/260 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A + L + P H I L T GD+ N L G K L+
Sbjct: 10 PLRIGTRRSNLAIVQAKGVQDQLQKI--APDHTFEIEALHTLGDKDQNSALYNFGAKNLW 67
Query: 65 TEEIEKKLISGEIDCAVHSAK-------DMPTKLLKGLQISAYLPREDIRDVFISHTA-- 115
T E+E+ L SG++D VH K DMPT L ++A R+D RD I
Sbjct: 68 TTELEELLTSGKLDVIVHCLKGECSKNSDMPTNLPDSCDLAAIPLRDDPRDALIVKAGLP 127
Query: 116 -QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLA 172
SL+ L ++IGTSS+RR A L R + + RG +ETRL KL++ ++ I+++
Sbjct: 128 YTSLQTLPEGAIIGTSSVRRSAQLHRLFPSLRFTNIRGNVETRLAKLDDPQSEYTCIVMS 187
Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELV-KVINHEDTWDS 229
G++R+ I + L +D + GQGA+ +E + K L+ ++++H+ +
Sbjct: 188 ACGLERIGLGYRISQRLGSKDGGILHAIGQGALGLEVRKGDTKILHLLDQLVDHKSSLAC 247
Query: 230 VNCERAFLAELDGSCKSAIA 249
+ ERA + L+G C I
Sbjct: 248 L-AERALMRTLEGGCSVPIG 266
>gi|88603799|ref|YP_503977.1| porphobilinogen deaminase [Methanospirillum hungatei JF-1]
gi|88189261|gb|ABD42258.1| hydroxymethylbilane synthase [Methanospirillum hungatei JF-1]
Length = 295
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 13/251 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA A A + + L D+ + ++ +ST GD T L EIGG+G+F
Sbjct: 2 PLRVGTRASELAKAQAVKVCTMLEDLGV----DTELVFISTAGDEQTGVPLHEIGGQGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++ L+ +ID AVHS KD+P + GL SA L R+ D + T L ++
Sbjct: 58 VRALDDALVQNKIDLAVHSMKDIPAERPYGLVTSAILARDSPCDYIV--TDHELDEI--- 112
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS RR A R + RG + TRL+KL + + AI+LA AG++RL +
Sbjct: 113 TTLGTSSTRRTAQCRRNLPWADIRPLRGNVNTRLSKLQSGEYDAIMLAKAGLERLSM-TL 171
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L+ PSP QG I + + +P +++ I+ T ER + + G C
Sbjct: 172 DGYQLDPRVHVPSPNQGTIAVVSR-TDPDVTDIISKIDDPKTRMDTLLERRVMEMIGGGC 230
Query: 245 KSAIAGFAYCK 255
+ + YCK
Sbjct: 231 FTPLG--IYCK 239
>gi|68536995|ref|YP_251700.1| hypothetical protein jk1901 [Corynebacterium jeikeium K411]
gi|68264594|emb|CAI38082.1| hemC [Corynebacterium jeikeium K411]
Length = 367
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 130/252 (51%), Gaps = 11/252 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGK 61
+ F IGTR S LA R + ++V P GD + + +IG
Sbjct: 25 RTFLIGTRRSALATTQTSHVRDGMQSAGYAAELHLVHTP----GDASQAAQIPVAQIG-V 79
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE-DIRDVFISHTAQSLKD 120
G+FTE + K L +GE D AVHS KD+PT + +PR D R+V +S Q L +
Sbjct: 80 GVFTETLRKALEAGECDVAVHSFKDLPTA--PDPRFRTVVPRRVDPREVLVSRNNQPLLE 137
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+ RR + + R D+ ++ RG I+TR+ + + A++LA AG++R+
Sbjct: 138 LPQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGRTEKD-LDAVVLARAGLERVG 196
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L
Sbjct: 197 QLERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTL 256
Query: 241 DGSCKSAIAGFA 252
+ C + +A ++
Sbjct: 257 EAGCTAPVAAYS 268
>gi|45358435|ref|NP_987992.1| porphobilinogen deaminase [Methanococcus maripaludis S2]
gi|44921193|emb|CAF30428.1| Porphobilinogen deaminase [Methanococcus maripaludis S2]
Length = 304
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 128/254 (50%), Gaps = 20/254 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ E + L++ I II + T GD+ N+ L ++G G+FT
Sbjct: 3 LRIGTRGSTLAMVQT-EYIAGLLNDLDIETE---IIIVKTTGDKDQNKKLADLG-IGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDEL 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR + L +++ RG + TR+NKL N + I++A AG+ I
Sbjct: 118 NVGTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGL--------I 169
Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ +++ +F P+P QG I + + + K ++++ I + T+ ER L
Sbjct: 170 RQGIDLSEFNYKKLDILPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALK 229
Query: 239 ELDGSCKSAIAGFA 252
E G C++ FA
Sbjct: 230 EYGGGCQAPFGAFA 243
>gi|256026474|ref|ZP_05440308.1| porphobilinogen deaminase [Fusobacterium sp. D11]
gi|289764485|ref|ZP_06523863.1| porphobilinogen deaminase [Fusobacterium sp. D11]
gi|289716040|gb|EFD80052.1| porphobilinogen deaminase [Fusobacterium sp. D11]
Length = 220
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Query: 85 KDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSD 144
KDMP KGL A RED RDV +S L L + IGTSSLRR L R D
Sbjct: 2 KDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVTLPQGAKIGTSSLRRAMNLKAVRPD 60
Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204
+ RG I TRL KL AI+LA AG+KR I E L+ E FPP+P QG +
Sbjct: 61 FEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTGMTDKITEYLSGEVFPPAPAQGVLY 120
Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264
I+ N+ + +E++K I++E+ V ER F DG C + + ++ G + F +
Sbjct: 121 IQCRENDKEIKEILKSIHNENVAKIVEIEREFSKIFDGGCHTPMGCYSQVNGDKIKFTAV 180
Query: 265 VLASDGKI 272
L +I
Sbjct: 181 YLDEGKQI 188
>gi|167535436|ref|XP_001749392.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772258|gb|EDQ85913.1| predicted protein [Monosiga brevicollis MX1]
Length = 643
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 111/211 (52%), Gaps = 8/211 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E RIGTR S LA+ L H P ++PLST GD L +
Sbjct: 413 ESPHIRIGTRSSVLAMWQTRWVVERLTRAH--PGVRFSVVPLSTVGDANLTLDLNKFSTT 470
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKD 120
G+FT+ + + L++ E+D VHS KD+P+ + G Q++A PRED RDV + H S +KD
Sbjct: 471 GIFTDALVRALLAQEVDILVHSLKDLPSTISPGTQLAAIGPREDPRDVVVFHHRHSEIKD 530
Query: 121 LA---LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175
LA +V+GTSS RR+A L + RG + TRL KL++ N A+ LA AG
Sbjct: 531 LAQLPAGAVVGTSSTRRRAQLAAAYPQLRFAPVRGNVMTRLRKLDDPANGYDALCLAAAG 590
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ RL E I + L + + GQGA+ I+
Sbjct: 591 LIRLGLEARIGQFLPLTVSRHAIGQGALGIQ 621
>gi|4884830|gb|AAD31824.1|AF131199_3 porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5]
Length = 144
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI 145
L S++GTSSLRR+A LL R D+
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDL 143
>gi|299134347|ref|ZP_07027540.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
gi|298591094|gb|EFI51296.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
Length = 324
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 139/306 (45%), Gaps = 20/306 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LF 64
RIGTR S +ALA E L P + I+ T GD+ L ++GGKG F
Sbjct: 1 MRIGTRKSVMALAQTNEIARQLTAAD--PSLAVEIVKFETMGDQDQTGKLLDLGGKGGAF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+I + G ++ A+HS KDMP + GL I A L R+ D + +L +L
Sbjct: 59 VAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGAMLLRDPPTDALVVRNGVTLDELRR 118
Query: 124 HS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AH 167
IGT+++RR A + R + +I FRG +TR+ KL+ + A
Sbjct: 119 SRGKGFKIGTNAVRRAAYVRRLFPEAEIIHFRGAADTRIRKLDGREMQRLPDGGEVGPAD 178
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
A+++A AG++R+ I + ++ P+ GQG + +E + + + I++ +
Sbjct: 179 ALVMARAGLERVGFADRIVHQFSPDEMLPAVGQGIVAVECAAADWQTLARLAGIDNAVSR 238
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
ER L L+G C S IAG+A G + VL F EV+R G
Sbjct: 239 QCGEAEREVLWVLNGHCNSPIAGYATLDGGEISLKAAVLDEANHHFIEVTRRGPVGRPRE 298
Query: 288 IGRDAA 293
+GR A
Sbjct: 299 LGRAVA 304
>gi|67515679|ref|XP_657725.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4]
gi|40746143|gb|EAA65299.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4]
Length = 350
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 17/294 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LAL ++L + + P + I T GD+ T L + K
Sbjct: 15 QKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTKN 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDM---PTKLLKGLQISAYLPREDIRDVFISHTA---Q 116
L+T+E+E L +G +D VHS K + PT L + + RED RD +
Sbjct: 73 LWTQELEDLLEAGSVDLIVHSLKGISYVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNM 132
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
SL ++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++ ++LA A
Sbjct: 133 SLAEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAA 192
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+ RL I + L+ + + GQGA+ IE + ++++ I H++T +
Sbjct: 193 GLLRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLA 252
Query: 233 ERAFLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDGKIFHEVSRNGN 281
ER+ L L+G C + + GS+ L +V++ DG EV +G
Sbjct: 253 ERSLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGT 306
>gi|297180547|gb|ADI16759.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0010_11B23]
Length = 292
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 136/283 (48%), Gaps = 18/283 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL D++K N I T+GDR + + + K F
Sbjct: 1 MRIATRSSKLALKQV----DIFKDLYKTQEINFEIKTQITEGDRKSKKG-ENLFDKAHFV 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++E L++ + D A+HS KDM +GL+I A + + DV + +L DLA +
Sbjct: 56 EDLESSLLNYDADIAIHSLKDMSCHDTEGLEIYAAIEHQSRSDVMVYKDQINLNDLA-NI 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR + + + + RG I+TRL KL+ +K AI+LA AGI+RL
Sbjct: 115 KIGTSSLRRTRQCKHFLKNNNCSEIRGNIDTRLLKLHEDKFDAIILAKAGIERLG----- 169
Query: 186 KEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
LN+ DF P+ GQG I ++ ++ K + L+ I + + + ER + L+
Sbjct: 170 ---LNVNFIDLDFLPAIGQGIIAVQCRSDDKKTKTLLDQIKNFELLQMIEIERRIVRNLN 226
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
+C SA++ + G + + I E S N N D
Sbjct: 227 ATCNSALSIRSKIDGDVFQTCLEIYGDNEIISEEFSSNLNSID 269
>gi|323305779|gb|EGA59518.1| Hem3p [Saccharomyces cerevisiae FostersB]
Length = 275
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + K P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---H 113
K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ K+ I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIA 249
ERA + L+G C I
Sbjct: 239 SERALMRTLEGGCSVPIG 256
>gi|167835847|ref|ZP_02462730.1| porphobilinogen deaminase [Burkholderia thailandensis MSMB43]
Length = 159
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRG 152
GTSSLRR+A+L + V RG
Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRG 158
>gi|58699795|ref|ZP_00374427.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58533687|gb|EAL58054.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 199
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 6/187 (3%)
Query: 108 DVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167
D FISH SL+ L + I TS++RRK LL +R D++++ RG + TRL N
Sbjct: 10 DAFISHKHNSLESLPQQATIATSAIRRKVQLLNFRPDLNIVPLRGNVTTRLQ---NQSFD 66
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
I+LA AG+ RL+K +I E+L + + GQGAICI+ N+ K +L++ IN+ ++
Sbjct: 67 GIILAEAGLIRLEKHHLITEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSF 126
Query: 228 DSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
V ER+F+ ++GSC + +A A Y + LY ++ +DGK + R DA
Sbjct: 127 IGVKSERSFMKTVNGSCFTPLAALAEYVSENMLYLRCML--ADGKNIYFTERTSFIEDAE 184
Query: 287 NIGRDAA 293
+G DA
Sbjct: 185 KMGMDAG 191
>gi|227496731|ref|ZP_03927005.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434]
gi|226833762|gb|EEH66145.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434]
Length = 402
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 61/301 (20%)
Query: 6 FRIGTRCSPLAL------AHAFETRSSL--MDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
R+GTR S LAL A E ++L ++H + ++P+ T+GD + L++
Sbjct: 4 VRLGTRGSALALTQSGLVARMLEQAAALAGQELH------VELVPVRTRGD-VDPTALSQ 56
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ- 116
+GG G+F + + L++GE D AVHS KD+PT + GL+I+A RED RDV + A
Sbjct: 57 LGGVGVFATALREALLAGECDLAVHSYKDLPTAAVPGLRIAAVPAREDPRDVLCTRAATL 116
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--------- 167
L DL + +GT S RR A LL R D++++ RG + TRL ++ +
Sbjct: 117 GLHDLPAGARVGTGSPRRSAQLLAQRPDLTIVPIRGNVPTRLARVVGSVVSADGPMGATA 176
Query: 168 -----AILLAYAGIKRLKKEKVIKEIL----------NIEDFP----------------- 195
A +LA +G++RL E + L ++ P
Sbjct: 177 EPDLDAAILALSGMRRLGLEDYASQPLAARCGARSQVEVQGIPDGGSAAGSPATTEPWML 236
Query: 196 PSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251
P+ QGA+ +ET P + +++ T + ER+ + L C + +
Sbjct: 237 PAAAQGALAVETRDRVSCELPVLTVALALVDDPVTRACADAERSLMRCLAAGCAAPVGAL 296
Query: 252 A 252
A
Sbjct: 297 A 297
>gi|134045720|ref|YP_001097206.1| porphobilinogen deaminase [Methanococcus maripaludis C5]
gi|132663345|gb|ABO34991.1| hydroxymethylbilane synthase [Methanococcus maripaludis C5]
Length = 304
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 127/254 (50%), Gaps = 20/254 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ E + L++ + II + T GD+ N+ L ++G G+FT
Sbjct: 3 LRIGTRGSTLAMIQT-EYIAGLLNDLGVETE---IIIVKTTGDKDQNKKLADLG-LGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ K++ EID AVHS KD+PT + LQI+A RE D+ I
Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSEELQITATPKRESPDDIIIWRKDSDFDIEHDEL 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR + L +++ RG + TR+NKL + I++A AG+ I
Sbjct: 118 NIGTSSIRRTSFLQFTHPNLTPKLLRGNVATRINKLRTGEYDTIIMAKAGL--------I 169
Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ +++ +F P+P QG I + + + K E++ I + T+ ER L
Sbjct: 170 RQGIDLSEFNYKKPEILPAPAQGVIGVASRKADTKINEILDKICDKKTYIEAAAERWALK 229
Query: 239 ELDGSCKSAIAGFA 252
E G C++ FA
Sbjct: 230 EYGGGCQAPFGAFA 243
>gi|151941802|gb|EDN60158.1| phorphobilinogen deaminase [Saccharomyces cerevisiae YJM789]
Length = 327
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + K P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---H 113
K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ K+ I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIA 249
ERA + L+G C I
Sbjct: 239 SERALMRTLEGGCSVPIG 256
>gi|6319996|ref|NP_010076.1| Hem3p [Saccharomyces cerevisiae S288c]
gi|122846|sp|P28789|HEM3_YEAST RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3771|emb|CAA77804.1| porphobilinogen deaminase [Saccharomyces cerevisiae]
gi|1429351|emb|CAA67486.1| hydroxymethylbilane synthase [Saccharomyces cerevisiae]
gi|1431340|emb|CAA98783.1| HEM3 [Saccharomyces cerevisiae]
gi|190405197|gb|EDV08464.1| phorphobilinogen deaminase [Saccharomyces cerevisiae RM11-1a]
gi|256270069|gb|EEU05314.1| Hem3p [Saccharomyces cerevisiae JAY291]
gi|259145042|emb|CAY78306.1| Hem3p [Saccharomyces cerevisiae EC1118]
gi|285810835|tpg|DAA11659.1| TPA: Hem3p [Saccharomyces cerevisiae S288c]
gi|323309897|gb|EGA63098.1| Hem3p [Saccharomyces cerevisiae FostersO]
gi|323349387|gb|EGA83611.1| Hem3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 327
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + K P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---H 113
K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ K+ I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIA 249
ERA + L+G C I
Sbjct: 239 SERALMRTLEGGCSVPIG 256
>gi|325001831|ref|ZP_08122943.1| porphobilinogen deaminase [Pseudonocardia sp. P1]
Length = 322
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 7/201 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+A + +++ D H ++ +ST GDR + +T++G G+F
Sbjct: 4 LKIGTRPSKLAVAQS----TTIADRLTAAGHPSELVTVSTSGDR-SMAPVTQLG-VGVFV 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L +G+ID AVHS KD+PT + L+I+A RED RD ++ + L +L +
Sbjct: 58 SALRDALDAGDIDVAVHSFKDLPTAQPEHLRIAAVPGREDPRDALVTG-GRVLGELGRGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L + V+ RG ++TR+ K+ + + A+++A AG++RL + +
Sbjct: 117 RVGTGSPRRAAQLYALGQGLEVVPIRGNVDTRIGKVRSGELDAVVVAAAGLRRLGRIEEA 176
Query: 186 KEILNIEDFPPSPGQGAICIE 206
E+++ P+P QGA+ IE
Sbjct: 177 DELIDPLQMLPAPAQGALAIE 197
>gi|1749684|dbj|BAA13899.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 335
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 144/284 (50%), Gaps = 28/284 (9%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG---GK 61
F IGTR S LA+ H ++ ++ K PH II T GD I ++ E K
Sbjct: 7 FPIGTRKSKLAVIH----QNYREELEKHNPHLEFPIISRDTIGDEILSKAWLEFKRQLAK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117
L+T E+E L++ + VHS KD+P++ + I+ R D + SH ++
Sbjct: 63 SLWTRELEALLVTNQCRILVHSLKDLPSENARWYGIACIPKRSCPLDAIVFKAGSHY-KT 121
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ DL SV+GTSS+RR+ALL R + +D RG + TRL KL+ +++ ++LA AG
Sbjct: 122 VADLPPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAG 181
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + I ++L + GQGA+ +E ++ + E++K + H++T + ERA
Sbjct: 182 LFRLGLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERA 241
Query: 236 FLAELDGSCK---------SAIAGFAYCKGSTLYFYGIVLASDG 270
+ L G C AI+ +Y + G VL++DG
Sbjct: 242 LMKRLQGGCAIPIGVQTDVLAISNSSY----RISLLGTVLSADG 281
>gi|3172397|gb|AAC18581.1| porphobilinogen deaminase [Brevibacillus brevis]
Length = 151
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF
Sbjct: 4 WKVGTRRSKLALTQTNWVVDKLKGFA--PEADFELHEIVTKGDRILDVTLSKVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L E D AVHS KDMP +L +GL I A R D RDV +S ++L +L +
Sbjct: 62 KEIEQSLFDKETDFAVHSLKDMPAELPEGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIE 155
++GTS+LRR A +L R DI + RG I+
Sbjct: 122 LVGTSTLRRSAQILAHRPDIQIESLRGNID 151
>gi|304393221|ref|ZP_07375149.1| porphobilinogen deaminase [Ahrensia sp. R2A130]
gi|303294228|gb|EFL88600.1| porphobilinogen deaminase [Ahrensia sp. R2A130]
Length = 324
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 20/283 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LF 64
F I TR S +ALA A L + +P ++ + + +GDR L GGKG F
Sbjct: 4 FLIATRKSKMALAQANHVADLLREA--VPGLDVDLAENNPRGDRDQISKLDRHGGKGGAF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120
EI +++G A+HS KDMP + GL I AYL R+D D + T +++
Sbjct: 62 VAEIRADIVAGRSQVAMHSLKDMPGNEETPGLVIGAYLTRDDPTDSLVLRDGITMDQMRE 121
Query: 121 LALHSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN------------KAH 167
+ +GT+S+RR A L + +I FRG ++R+ KL+ A
Sbjct: 122 TQGDGLKLGTNSVRRAAFLRNLFPNAEIIHFRGAADSRIEKLDKGLMQQLVDGGEVGPAD 181
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
ILLA +G+ R+ I + P+ GQG + +E ++ + +E + I+ +
Sbjct: 182 GILLATSGMARVGVSDRISHTFTTSEMLPAVGQGIVAVECGSSDWQTREWLARIDDANAR 241
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
ER L LDG C S IA + +G T+ V+ DG
Sbjct: 242 ACAEAEREVLWVLDGHCNSPIAAHSVIEGDTMTMESAVMEIDG 284
>gi|70606576|ref|YP_255446.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639]
gi|68567224|gb|AAY80153.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639]
Length = 296
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 7/214 (3%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
+I + TK D ++ L +G KG+F +E+ + +I+GE D AVHS KDM + + + L +
Sbjct: 33 LIVVKTKADLFQDKPLNSLG-KGVFEKEVNEAVINGEADIAVHSMKDMLSDMDEKLVLYG 91
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
LPR+ D ++ + L ++ VIGTSS+RR++++ +R D+ V D RG I+TRL
Sbjct: 92 VLPRDSPYDSLVAE--KDLFNIESGKVIGTSSIRRRSMISFYRRDLVVKDLRGNIDTRLK 149
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEI-LNIEDFPPSPGQGAICIETHVNNPKAQELV 218
K + + I++A A IKRL V++ ++ + P QG I I VN K + L
Sbjct: 150 KYQSKEYDGIVIAEAAIKRL--NSVVRYYKIDPKIITPEANQGIIAIVGRVNE-KLKTLF 206
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
+ +N E T ER + L G C S I A
Sbjct: 207 RELNDERTLKEALVERTVVKLLGGGCHSPIGILA 240
>gi|167718597|ref|ZP_02401833.1| porphobilinogen deaminase [Burkholderia pseudomallei DM98]
Length = 142
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L + +V+
Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPVGAVV 133
Query: 128 GTSSLRRKA 136
GTSSLRR+A
Sbjct: 134 GTSSLRREA 142
>gi|159906164|ref|YP_001549826.1| porphobilinogen deaminase [Methanococcus maripaludis C6]
gi|159887657|gb|ABX02594.1| porphobilinogen deaminase [Methanococcus maripaludis C6]
Length = 304
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 20/254 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ E + L++ + II + T GD+ N+ L ++G G+FT
Sbjct: 3 LRIGTRGSTLAMIQT-EYIAGLLNDLGVETE---IIIVKTTGDKDQNKKLVDLG-IGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQIAATPKRESPDDIIIWRKDSDFDIEHDEL 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR + L +++ RG + TR++KL + I++A AG+ I
Sbjct: 118 NVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRKGEYDTIIMAKAGL--------I 169
Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ +++ +F P+P QG I + + + K E+++ I + T+ ER L
Sbjct: 170 RQGIDLSEFNYKKLEILPAPAQGVIGVASRKADAKINEILEKICDKKTYIEATAERWALK 229
Query: 239 ELDGSCKSAIAGFA 252
E G C++ FA
Sbjct: 230 EYGGGCQAPFGAFA 243
>gi|300933794|ref|ZP_07149050.1| hypothetical protein CresD4_06949 [Corynebacterium resistens DSM
45100]
Length = 355
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 138/274 (50%), Gaps = 14/274 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGG 60
++ IGTR S LA + ++ + + +IV P GD + + + +IG
Sbjct: 27 QRTLLIGTRRSQLATTQSGHVQAGITEQGWASELHIVQTP----GDASQASQIPVAQIG- 81
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLK 119
G+FTE + L + E D AVHS KD+PT K +I +P R D R+V +S + LK
Sbjct: 82 VGVFTETLRNALAAKECDVAVHSFKDLPTAPDKRFRI--IVPERVDPREVLVSVDNRLLK 139
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + +GTS+ RR + L R D+ ++ RG I++R+ ++ + A++LA AG++R+
Sbjct: 140 DLPEGAKVGTSAPRRVSQLRAVRPDLEILPLRGNIDSRMGRVGTD-LDAVILARAGLERV 198
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E L+ P+P QGA+ +E ++ +A + V + H + ERA LA
Sbjct: 199 GQLDRAAESLDPHVIMPAPAQGALAVEVRADDDEAWQAVLPLEHLPSHLMAAAERAVLAT 258
Query: 240 LDGSCKSAIAGFAYCKGS---TLYFYGIVLASDG 270
L+ C + +A + GS L V DG
Sbjct: 259 LEAGCSAPVAAHSEWTGSDHTELTISAGVFGMDG 292
>gi|319440758|ref|ZP_07989914.1| hypothetical protein CvarD4_03233 [Corynebacterium variabile DSM
44702]
Length = 336
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 19/258 (7%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGLFT 65
IGTR S LA R +L+D + V P GD + + T + G G+FT
Sbjct: 7 IGTRASALASTQTGMVRDALVDNGATADLHFVHTP----GD-ASQKAQTPVSRIGVGVFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E + L +GE D AVHS KD+PT I+ PR D R+V +SH +L++L +
Sbjct: 62 ETLRNALAAGECDVAVHSFKDLPTAPDPRF-IAVVPPRVDPREVLVSHGNLTLRELPTGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-----------AILLAYA 174
IGT + RR + + R D+ I RG I+TR+ + + A++LA A
Sbjct: 121 KIGTGAPRRVSQIRAVRPDVECISIRGNIDTRMGRAGDGTTSTVVEGGPGDLAAVVLARA 180
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++R+ E + + D P+P QGA+C+E ++ +A V ++ + ER
Sbjct: 181 GLERVGHLDHAAETVAVTDIMPAPAQGALCVEVRADDAEAVAAVLGLDDPASHARAVAER 240
Query: 235 AFLAELDGSCKSAIAGFA 252
LA L+ C + + ++
Sbjct: 241 GVLATLEAGCTAPVGAYS 258
>gi|330945695|gb|EGH47153.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 191
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWR 142
L S++GTSSLRR+A LL R
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARR 140
>gi|150402047|ref|YP_001329341.1| porphobilinogen deaminase [Methanococcus maripaludis C7]
gi|150033077|gb|ABR65190.1| porphobilinogen deaminase [Methanococcus maripaludis C7]
Length = 304
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 20/254 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ E + L++ + I+ + T GD+ + L ++G G+FT
Sbjct: 3 LRIGTRGSTLAMVQT-EYIAGLLNDLGVETE---IVIVKTTGDKDQTKKLVDLG-LGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 58 KELDSKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDSDFDIEHDEL 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR + L +++ RG + TR++KL N + I++A AG+ I
Sbjct: 118 DVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRNREYDTIIMAKAGL--------I 169
Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ +++ +F P+P QG I + + + K E+++ I + T+ ER L
Sbjct: 170 RQGIDLSEFNYTKLDMLPAPAQGVIGVASRKADIKINEILEKICDKKTYIEATAERWALK 229
Query: 239 ELDGSCKSAIAGFA 252
E G C++ FA
Sbjct: 230 EYGGGCQAPFGAFA 243
>gi|15791132|ref|NP_280956.1| porphobilinogen deaminase [Halobacterium sp. NRC-1]
gi|169236887|ref|YP_001690087.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Halobacterium salinarum R1]
gi|25453030|sp|Q9HMY5|HEM3_HALSA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|10581740|gb|AAG20436.1| porphobilinogen deaminase [Halobacterium sp. NRC-1]
gi|167727953|emb|CAP14741.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Halobacterium salinarum R1]
Length = 396
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+ TR S LAL A E +L D H++ ++ + T+GDR+T+ ++++G
Sbjct: 1 MSSQQIRLATRGSDLALRQAGEVVDTLEDRR----HDVELVEVETEGDRVTDALISDLGK 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F ++++++ G +D AVHS KD+PT++ + L ++A RE+ DV ++ L+D
Sbjct: 57 TGAFVRALDQEVMEGTVDAAVHSMKDVPTEVPEDLVVAAVPHRENPADVLVTPDGTDLED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
L SV+GT+SLRR A + R + V RG + TR+ KL
Sbjct: 117 LPAGSVVGTASLRRGAQVQAHRPGLDVEPIRGNVGTRVEKL 157
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
++ + + + + A+++A G++R V E L+ P+ GQGA+C+ ++
Sbjct: 238 QSAMERDPDTEYDALVMARVGLERTGLLHHVGIEELSTGTHVPATGQGALCVTARRDSDV 297
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
L + H T V ER L EL G C + I A +G T+ V + DG
Sbjct: 298 VDTLRDALEHVRTRVEVTAERVVLEELGGGCIAPIGVHALVQGDTIRTAVQVFSQDG 354
>gi|239607866|gb|EEQ84853.1| porphobilinogen deaminase [Ajellomyces dermatitidis ER-3]
Length = 347
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 156/314 (49%), Gaps = 18/314 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL R +L NI+ + D++T L E K
Sbjct: 18 KTTFTIGTRRSKLALVQTDLVRDALKAAWPQYEFNILTKDAAADLDKVT--PLREFTSKN 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + + +L
Sbjct: 76 LWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTLA 135
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SV+GTSS+RR A L R + D RG I+TRL KL+ ++LA AG+
Sbjct: 136 ELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGLL 195
Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R + I L+ + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 196 RTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAERN 255
Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C + + + + S L IV + DGK E+ ++ + + G
Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKD----VKSGE 311
Query: 291 DAAQYIRFISNKNV 304
+A + + ++++ V
Sbjct: 312 EAEVFGKQVADELV 325
>gi|261198286|ref|XP_002625545.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081]
gi|239595508|gb|EEQ78089.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081]
Length = 347
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 156/314 (49%), Gaps = 18/314 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL R +L NI+ + D++T L E K
Sbjct: 18 KTTFTIGTRRSKLALVQTDLVRDALKAAWPQYEFNILTKDAAADLDKVT--PLREFTSKN 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + + +L
Sbjct: 76 LWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMALA 135
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SV+GTSS+RR A L R + D RG I+TRL KL+ ++LA AG+
Sbjct: 136 ELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGLL 195
Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R + I L+ + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 196 RTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAERN 255
Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C + + + + S L IV + DGK E+ ++ + + G
Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKD----VKSGE 311
Query: 291 DAAQYIRFISNKNV 304
+A + + ++++ V
Sbjct: 312 EAEVFGKQVADELV 325
>gi|302695979|ref|XP_003037668.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8]
gi|300111365|gb|EFJ02766.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8]
Length = 358
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 128/250 (51%), Gaps = 8/250 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSL--MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
+ + F + +R SP+A A + +++L +D P +ST GD+ + L +G
Sbjct: 5 QPRTFVLASRKSPMAQAQTVQVQAALRALDTSPSAPKFETSF-MSTAGDKNQVQALYFLG 63
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116
GK L+T ++E L D VHS KD+PT L +G ++ R++ DV +
Sbjct: 64 GKELWTGDLEVALKERAADMLVHSLKDVPTVLPEGFVLAGISERDEPVDVMCVKAGMPWR 123
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174
+ ++L SV+GTSS+RR A+L R + +D RG I TRL KL++ A++ A A
Sbjct: 124 TPEELPEGSVVGTSSVRRIAMLKRRFPHLKFLDVRGNIATRLAKLDDPALPYAALIAAKA 183
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R+ + I L + + GQGA+ IE ++ +A L K I H + ER
Sbjct: 184 GLVRVNLQHRITCDLAPPTYSYAVGQGALGIEVRADDTEALALCKRITHWPSLWRCRAER 243
Query: 235 AFLAELDGSC 244
A L EL+G C
Sbjct: 244 ACLRELEGGC 253
>gi|327355808|gb|EGE84665.1| porphobilinogen deaminase [Ajellomyces dermatitidis ATCC 18188]
Length = 347
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 18/314 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL R +L NI+ + D++T L E K
Sbjct: 18 KTTFTIGTRRSKLALVQTDLVRDALKAAWPQYEFNILTKDAAADLDKVT--PLREFTSKN 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + + +L
Sbjct: 76 LWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTLA 135
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L SV+GTSS+RR A L R + D RG I+TRL KL+ ++LA AG+
Sbjct: 136 ELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGLL 195
Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R + I L + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 196 RTGQGDRITYYLGSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAERN 255
Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C + + + + S L IV + DGK E+ ++ + + G
Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKD----VKSGE 311
Query: 291 DAAQYIRFISNKNV 304
+A + + ++++ V
Sbjct: 312 EAEVFGKQVADELV 325
>gi|56752693|gb|AAW24560.1| SJCHGC02909 protein [Schistosoma japonicum]
Length = 268
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 23/215 (10%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL E SL+ V K PH + ++ ++T GD I + L++IG K LFT
Sbjct: 11 RVGSRRSNLALLQT-EMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDKSLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLA 122
+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L DL
Sbjct: 68 KELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKLSDLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-----------NKA---HA 168
+ + +GTSS+RR A L+R + I RG + TRL KL+ N++ A
Sbjct: 128 VGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSLSYDA 187
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
++LA AG++R+ I ++L+ + S QGA+
Sbjct: 188 LILAKAGVERMGWVDRIDQVLSDSFYAVS--QGAL 220
>gi|307719295|ref|YP_003874827.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM
6192]
gi|306533020|gb|ADN02554.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM
6192]
Length = 672
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 16/234 (6%)
Query: 6 FRIGTRCSPLALAHAFET----RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
R+GTR S LALA E R + + ++ +V+ P +GDR L + G
Sbjct: 4 LRLGTRGSRLALAQVREWIARWRDASPEAGEVEWEPMVLHP---RGDRDKRTPLHLVEGS 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISH----TAQ 116
FT+ +++ L+ G ID A+HSAKD+P +L +GL ++A P E R DV + H +A
Sbjct: 61 DFFTDALDEALLEGRIDVALHSAKDLPDELREGLSLAAITPLEGPREDVLVLHPRWASAS 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
S+ +L IGTSS RR+ L RSD ++D RG IE RL ++++ + +++A +
Sbjct: 121 SVDELPAGLRIGTSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAKVAL 180
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
RL E + F P P QG + + + + L V++ W V
Sbjct: 181 TRLALEVPHLPL----PFVPHPLQGRLAAVVREGDEEVRRLCAVLDDRGRWGRV 230
>gi|29841142|gb|AAP06155.1| similar to GenBank Accession Number P19356 hydroxymethylbilane
synthase (hemC) in Rattus sp [Schistosoma japonicum]
Length = 277
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 22/215 (10%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL E SL+ V K PH + ++ ++T GD I + L++IG K LFT
Sbjct: 11 RVGSRRSNLALLQT-EMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDKSLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLA 122
+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L DL
Sbjct: 68 KELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKLSDLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-----------NKA---HA 168
+ + +GTSS+RR A L+R + I RG + TRL KL+ N++ A
Sbjct: 128 VGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSLSYDA 187
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
++LA AG++R+ I ++L+ + F + +GA+
Sbjct: 188 LILAKAGVERMGWVDRIDQVLS-DSFYANELKGAL 221
>gi|254380811|ref|ZP_04996177.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1]
gi|194339722|gb|EDX20688.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1]
Length = 231
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 14/226 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGL 63
R+GTR SP+AL E DV + +V I+ + ++GDR L+ IGGKG
Sbjct: 11 VRLGTRPSPMAL----EQTGRFADVFRARYPQVVLDIVEIVSEGDRHRG-PLSTIGGKGA 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLK--GLQISAYLPREDIRDVFI---SHTAQSL 118
FT ++ L+ G + + AKD+P + G+ I+A LPRED RD + H +L
Sbjct: 66 FTRNADRYLLDGRVQATIACAKDVPGPHDRSPGIVIAAVLPREDTRDALVLPTGHPVTTL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
+L + +GTS+ RR ALL + + RG ++RL L+ + A ++ A AG+
Sbjct: 126 AELPPGTRVGTSAPRRSALLKALHPTLVQVPIRGNADSRLRALDAGRLGADVMIAALAGL 185
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+RL E EIL+ + P+ G G + +E ++P L+ +
Sbjct: 186 RRLGHEDRASEILDPAVWLPAAGAGTVIVEHRSDDPATGWLLAPLT 231
>gi|301167270|emb|CBW26852.1| putative porphobilinogen deaminase [Bacteriovorax marinus SJ]
Length = 512
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 140/272 (51%), Gaps = 28/272 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK ++IGTR S LA+ + + L K+ + + T+GD IT++ L ++ G
Sbjct: 1 MSKKIYKIGTRGSLLAVTQCTQVKEEL---EKLTGDQFELEIIKTQGDLITDKPLWQLDG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV-FISHTAQSLK 119
K FT+E+++ L++ ++D VHS KD+ ++ +G++++A R D+ FI + +++K
Sbjct: 58 KDFFTKELDEALLTNKVDMVVHSYKDLGSERPQGIKLAAITKRHFAHDILFIKN--ETIK 115
Query: 120 DLALHS--VIGTSSLRRKALLLRWRSDISVID--------FRGKIETRLNKLNNNKAHAI 169
+L+ ++GTSS RR + S+ D RG + TR+ KL + + AI
Sbjct: 116 NLSNKKEFIVGTSSPRRIVNIEAQLSEYLPTDNIKVETKMLRGNVNTRIGKLVDGQYDAI 175
Query: 170 LLAYAGIKRLK-KEKVIKE-----------ILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+LA GI+RL EK ++E IL FP + QGA+ IE + N + +
Sbjct: 176 VLALPGIERLAHSEKSLEELKVLLKDLNYMILPQSTFPSAASQGALAIECNEENTELYQK 235
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+++I + T V+ ER G C A+
Sbjct: 236 LQLIEDKVTVSEVSRERQAFNGYGGGCHLAVG 267
>gi|47224902|emb|CAG06472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 122/268 (45%), Gaps = 20/268 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT
Sbjct: 20 IRIGTRKSQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSLFT 77
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE+ D + H ++L L
Sbjct: 78 KELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALP 137
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
HSVIGTSSLRR A L + +DF+ + + L H + +R
Sbjct: 138 AHSVIGTSSLRRAAQL---KKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLN 194
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+K++ EDF A +N + +++ ED +V E G
Sbjct: 195 TRLKKLDEKEDFAAIILAAAGLRRMGWDN----RISQILEPEDCMYAVGQE--------G 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270
C +A K S LY G V + DG
Sbjct: 243 GCSVPVAVHTKVKDSQLYLTGAVYSLDG 270
>gi|260890848|ref|ZP_05902111.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Leptotrichia hofstadii F0254]
gi|260859401|gb|EEX73901.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Leptotrichia hofstadii F0254]
Length = 193
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 96/173 (55%), Gaps = 20/173 (11%)
Query: 8 IGTRCSPLALAHAFETRSSLM-------------DVHKIPPHNIVIIPLS---TKGDRIT 51
IGTR S LALA A + + L+ ++ N + I L TKGD+
Sbjct: 8 IGTRGSILALAQAEKVKEMLIKKYDELRENESFCEIEGFEKKNSLEIELKVIVTKGDKDL 67
Query: 52 NRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108
R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + + RED RD
Sbjct: 68 -RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFPMREDNRD 126
Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
V +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL
Sbjct: 127 VLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179
>gi|55379657|ref|YP_137507.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049]
gi|55232382|gb|AAV47801.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049]
Length = 389
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 4/156 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++ TR S LAL A R SL + ++ + T GD+I + + +G G F
Sbjct: 8 LQLATRGSDLALRQAATVRDSLSSRRLA----VELVEVETTGDQIRDELIHRLGKTGAFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++K++ GE+D AVHS KDMPT+ + L ++A R DV ++ +SL++L +
Sbjct: 64 RSLDEKVLDGELDAAVHSMKDMPTERPERLVVAAVPERAAAEDVLVTPDGRSLEELPEGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
+GTSSLRRKA LL R D++V RG ++TRL KL
Sbjct: 124 TVGTSSLRRKAQLLAERDDLTVEPLRGNVDTRLAKL 159
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK-EILNIEDFPPSPG 199
W D++ + R + + + + AI+LA AG+ R + + L+ + F P+PG
Sbjct: 207 WFDDLTEFERRA-----MERDPDVEYDAIVLAKAGLHRAGLTRYVGMSDLDPDQFVPAPG 261
Query: 200 QGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259
QGA+ + T V+ A ++ ++ T ER L EL G C + I A +G +
Sbjct: 262 QGALAV-TAVDGDLALDIKDRLDDPQTRIETTVERTILEELGGGCVAPIGVHAQLEGGVV 320
Query: 260 YFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA-AQY 295
+ VL+ DG + +++GRD A+Y
Sbjct: 321 HTRVRVLSQDG------------TEEVSVGRDVPAEY 345
>gi|27377509|ref|NP_769038.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110]
gi|27350653|dbj|BAC47663.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110]
Length = 313
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 133/294 (45%), Gaps = 20/294 (6%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTEEIEKKLI 73
+ALA E L +P ++ I+ T GD L GGKG F +I ++
Sbjct: 1 MALAQTEEIARRL--TAAVPGLDVEIVKFDTTGDLDQTSKLLPHGGKGGAFVAQIRAAVL 58
Query: 74 SGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV----IG 128
SGE+ A+HS KDMP + GL I A L R+ D + +L+ L IG
Sbjct: 59 SGELQAAMHSLKDMPGNEDTPGLVIGATLSRDPPSDALVLRDGVTLEALRQSRGKGFKIG 118
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AHAILLAYAGI 176
T+++RR A R D+ VI FRG +TR+ KL+N + A A+++A +G+
Sbjct: 119 TNAVRRAAYARRLFPDVEVIHFRGAADTRVRKLDNGEKQRLPDGGAVGPADALIMARSGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I + P+ GQG + +E + + ++++ I+ + ER
Sbjct: 179 DRVGLASRIAYEFTPAEMLPAAGQGIVAVECAAQDWQTRKILSSIDDPAAHACADAEREV 238
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C S +AGF+ G + VL G E SR G+ +GR
Sbjct: 239 LWVLNGHCNSPVAGFSTIAGDQMSLTASVLDLSGNTIIEASRTGSANRPRELGR 292
>gi|119174394|ref|XP_001239558.1| hypothetical protein CIMG_09179 [Coccidioides immitis RS]
Length = 331
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 14/292 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LAL R++L P + GD L K
Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQ--AAFPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + + +L
Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPSACVLAAVMKRENPRDVLVLKKGLPSMTL 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL+ ++LA AG+
Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R +E I + L+ + + GQG + IE ++ ++++ I T + ER
Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYTCLAER 242
Query: 235 AFLAELDGSCKSAIA-GFAYCKGST----LYFYGIVLASDGKIFHEVSRNGN 281
+ L L+G C + + + + L IV + DGK E+ +GN
Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGN 294
>gi|225684419|gb|EEH22703.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb03]
Length = 347
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 134/275 (48%), Gaps = 16/275 (5%)
Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
R S LAL RSSL P + + T GD L E K L+TEE+E+
Sbjct: 26 RKSKLALLQTDLIRSSLKAAW--PEYEFRVHSQDTAGDLNKVTPLREFTTKNLWTEELEE 83
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVI 127
L++ +ID VHS KD+PT+L K + A +PRED RDV + +L +L SV+
Sbjct: 84 LLVAKKIDFVVHSLKDVPTQLPKPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVV 143
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVI 185
GTSS+RR A L R + D RG IETRL KL+ + I+LA AG+ R + I
Sbjct: 144 GTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARI 203
Query: 186 KEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L+ ++ + GQGA+ +E ++ + + +++ I + ER+ L L+G
Sbjct: 204 SHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGG 263
Query: 244 CKSAIA-------GFAYCKGSTLYFYGIVLASDGK 271
C + + G + L IV + DGK
Sbjct: 264 CSAPLGVETEWVKGEGQGEVEKLRLRAIVASVDGK 298
>gi|45644676|gb|AAS73064.1| predicted porphobilinogen deaminase [uncultured marine gamma
proteobacterium EBAC20E09]
Length = 291
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 21/251 (8%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I +R S LALA E V K + II + T+GD I + + K F
Sbjct: 2 TIKIASRSSKLALAQVEEF------VKKFGISDYKIIKVKTEGD-IKSANGETLFDKAHF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+++K L++GE D AVHSAKD P GL + +LP + +DV I
Sbjct: 55 VSDVQKCLLNGEADIAVHSAKDTPAGETTGL-LRYFLPSQSNQDVLIFREEDKFNS---E 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSSLRR+ + I++++ G ++TRL KL+ + I+LA AG+ RL K+
Sbjct: 111 MKLGTSSLRRQLQAKHHLNAINIVNLSGNVDTRLEKLSQGEYDCIILAKAGLARL---KL 167
Query: 185 IKEI-LNIEDFPPSPGQGAICIETHVNNPKA---QELVKVINHED--TWDSVNCERAFLA 238
+ E+ + D+ + GQG +CIE +N+P A L+K I D +++ ER+ L
Sbjct: 168 LNELQYEVMDWSTASGQGFLCIEV-LNDPSADIYNFLLKSIREIDLNLGKNISTERSILE 226
Query: 239 ELDGSCKSAIA 249
++ C SAI+
Sbjct: 227 AINAGCNSAIS 237
>gi|87886445|dbj|BAE79637.1| porphobilinogen deaminase [Danio rerio]
Length = 203
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LA +T S + + ++ P + I+ +ST GD+I + L++IG K LF
Sbjct: 20 IRVGTRKSQLA---RIQTDSVVEKLKELYPDVLFEIVAMSTTGDKILDTALSKIGEKSLF 76
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L L
Sbjct: 77 TKELENALEKNEVDLVVHSLKDLPTVLPGGFTIGAVLKRENPHDAVVLHPKNKGKRLDSL 136
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
+ SVIGTSSLRR A L + + D RG + TRL KL+
Sbjct: 137 SNKSVIGTSSLRRAAQLKKRXXHLEFKDIRGNLNTRLKKLD 177
>gi|225561829|gb|EEH10109.1| porphobilinogen deaminase [Ajellomyces capsulatus G186AR]
Length = 345
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 157/315 (49%), Gaps = 18/315 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL R +L +I+ + D++T L E K
Sbjct: 18 KTTFTIGTRKSKLALVQTDLVRDALKAAWPQYEFDILTKDAAADLDKVT--PLREFTSKN 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+TEE+E+ L++ +ID VHS KD+PT++ + A +PRED RDV + +L
Sbjct: 76 LWTEELEELLLAKQIDLVVHSLKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTLA 135
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L S++GTSS+RR A L R + D RG I+TRL KL+ A++LA AG+
Sbjct: 136 ELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGLL 195
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 196 RTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAERN 255
Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C + + + +G+ TL IV + DGK E+ + + + G
Sbjct: 256 LLRTLEGGCSAPLGVETEWVQGAEGKETLMLRAIVSSVDGKEAVEI----EKVEKVTSGE 311
Query: 291 DAAQYIRFISNKNVF 305
+A + + ++++ V
Sbjct: 312 EAEVFGKKVADELVV 326
>gi|332295808|ref|YP_004437731.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796]
gi|332178911|gb|AEE14600.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796]
Length = 297
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 131/245 (53%), Gaps = 14/245 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGKGLFTE 66
IGTR S LAL A R ++K + I + GD++ L E +GLF +
Sbjct: 7 IGTRGSKLALTQA---RYVAEFINKFDSTIKIEIKIIKTTGDKLM-VALHEAPERGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLAL 123
EIE+ L++ +ID AVHS KDMP + + L+I A RED DV + + ++L D++
Sbjct: 63 EIEEALLNKDIDLAVHSMKDMPAEAVSELEIFAVPVREDPSDVIVPRKELSIENLDDISP 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KK 181
+SV TSSLRR +LL + + + D RG I+TRL KL+ +++A A + RL K+
Sbjct: 123 NSVFATSSLRRISLLNNFFTFKEIKDIRGNIDTRLKKLDEGFCDYLIMAKAALNRLGIKR 182
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ L+ F P+ QGA+ I+ + + +++K ++ +T S + ER L +
Sbjct: 183 NYI---TLDPFTFVPAVAQGALAIQGRRKDFNRFAKIIKFLDDFNTRISTDIERRVLKLI 239
Query: 241 DGSCK 245
G C+
Sbjct: 240 GGGCQ 244
>gi|257052010|ref|YP_003129843.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940]
gi|256690773|gb|ACV11110.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940]
Length = 373
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 134/324 (41%), Gaps = 64/324 (19%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FR+ TR S LAL R +L H + ++ + T GD + + + +G G F
Sbjct: 8 FRLATRGSDLALRQTGAIRDALESRR----HEVELLEVETTGDELRDELIHRLGKTGAFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++++ +GE D AVHS KD+PT+ +GL ++A R DV ++ L DL +
Sbjct: 64 HSLDERVRAGEADAAVHSLKDVPTEDREGLTVAAVPERAPANDVLVTPDGTDLDDLPEGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------------------ 161
+GTSSLRR+A LL R D+ V RG ++TR+ KL
Sbjct: 124 TVGTSSLRRRAQLLAERPDLDVQPLRGNVDTRVEKLLAPTLKAEYTARLDAQESEETTEN 183
Query: 162 --NNNKAHAILLA------YAGIKRLKKEKVIKEI------------------------- 188
+ KA + G+ ++++ +E+
Sbjct: 184 GDDETKATGQTFEQSFDDWFNGLAEIERKATAREVDTEYDAIVLAEAGLDRLGLTHHLDF 243
Query: 189 --LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L E F PSPGQG + + A+ + +I+ T ER L L G C +
Sbjct: 244 QALPDEQFVPSPGQGVVAVVAEEGE-AAEAIRDIIDDARTRVEATVERTILETLGGGCVA 302
Query: 247 AIAGFAYCKGSTLYFYGIVLASDG 270
I A +G + VLA DG
Sbjct: 303 PIGVRAVFQGRVVTTTVRVLAPDG 326
>gi|303314269|ref|XP_003067143.1| porphobilinogen deaminase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106811|gb|EER24998.1| porphobilinogen deaminase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037407|gb|EFW19344.1| porphobilinogen deaminase [Coccidioides posadasii str. Silveira]
Length = 331
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 14/292 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LAL R++L P + GD L K
Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQ--AAFPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + + +L
Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPTACVLAAVMKRENPRDVLVLKKGLPSMTL 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL+ ++LA AG+
Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R +E I + L+ + + GQG + IE ++ ++++ I T + ER
Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYACLAER 242
Query: 235 AFLAELDGSCKSAIA-GFAYCKGST----LYFYGIVLASDGKIFHEVSRNGN 281
+ L L+G C + + + + L IV + DGK E+ +G+
Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGD 294
>gi|297622583|ref|YP_003704017.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093]
gi|297163763|gb|ADI13474.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093]
Length = 284
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 6/248 (2%)
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
I+ RTL GG +E+ L G I AV S +P L GL ++A R + R
Sbjct: 34 ISQRTLQSRGG----ADELLHALQGGRIHIAVQSLDTLPLTLPDGLSVAAVTKRLEPRSA 89
Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169
++ A+SL DL + +G +LR +A +L R D+ V F G++E L L+ + A+
Sbjct: 90 LLARGAKSLGDLPKGAEVGVPTLRDRAFVLAARRDLKVRVFTGELEDALALLSAQELGAL 149
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+ A +L + + + +L + PP+PGQGA+ + ++ A +L + H ++D
Sbjct: 150 VWPSAPFIQLGQRERVTTLLEPQQLPPAPGQGALALVVRDDDDLASDLAYTLQHRPSFDR 209
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
ERAF ++ S I FA L+ G +G + G+ +A +
Sbjct: 210 ACAERAFARQMSSSAHH-IGAFASVTADGELHLLGAAARDEGDWMIQAEVTGDAAEAEEL 268
Query: 289 GRDAAQYI 296
GR+ AQ +
Sbjct: 269 GRELAQDV 276
>gi|110669321|ref|YP_659132.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Haloquadratum walsbyi DSM 16790]
gi|109627068|emb|CAJ53547.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Haloquadratum walsbyi DSM 16790]
Length = 394
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ TR S LAL A + +L D + + +I + T+GD+I + + ++G G F
Sbjct: 11 LTLATRGSDLALKQATSVQEALTDER----YEVDLIEVETRGDQIQDELIHQLGKTGAFV 66
Query: 66 EEIEKKLI--SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
++KK++ + E D AVHS KDMPT L ++ R D+ I+ Q L DL
Sbjct: 67 RALDKKVLDPTAEADAAVHSMKDMPTDSPDDLVVAGIPQRAPPGDLLITTDGQRLSDLPS 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
+ IGTSSLRR+A LL R+DI+V RG I+TR+ KL
Sbjct: 127 GATIGTSSLRRQAQLLDQRTDITVEPLRGNIDTRIEKL 164
>gi|154283391|ref|XP_001542491.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1]
gi|150410671|gb|EDN06059.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1]
Length = 345
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 14/288 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL R +L +I+ + D++T L E K
Sbjct: 18 KTTFTIGTRKSKLALVQTDLVRDALKAAWPQYEFDILTKDAAADLDKVT--PLREFTSKN 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+TEE+E+ L++ +ID VHS KD+PT++ K + A +PRED RDV + +L
Sbjct: 76 LWTEELEELLLAKQIDLVVHSLKDVPTQIPKTCILGAMMPREDPRDVLVIKKGLPNMTLA 135
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L S++GTSS+RR A L R + D RG I+TRL KL+ A++LA AG+
Sbjct: 136 ELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLAKLDAQDGPFSALILAAAGLL 195
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 196 RTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAERN 255
Query: 236 FLAELDGSCKSAIA----GFAYCKG-STLYFYGIVLASDGKIFHEVSR 278
L L+G C + + G TL IV + DGK E+ +
Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDADGKETLMLRAIVSSVDGKEAVEIEK 303
>gi|240275436|gb|EER38950.1| porphobilinogen deaminase [Ajellomyces capsulatus H143]
Length = 345
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 155/315 (49%), Gaps = 18/315 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL R +L +I+ + D++T L E K
Sbjct: 18 KSTFTIGTRKSKLALVQTDLVRDALKAAWPQYEFDILTKDAAADLDKVT--PLREFTSKN 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + +L
Sbjct: 76 LWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTLA 135
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L S++GTSS+RR A L R + D RG I+TRL KL+ A++LA AG+
Sbjct: 136 ELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGLL 195
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 196 RTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAERN 255
Query: 236 FLAELDGSCKSAIA----GFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C + + +G TL IV + DGK E+ + + + G
Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEI----EKVEKVTSGE 311
Query: 291 DAAQYIRFISNKNVF 305
+A + + ++++ V
Sbjct: 312 EAEVFAKKVADELVV 326
>gi|325091275|gb|EGC44585.1| porphobilinogen deaminase [Ajellomyces capsulatus H88]
Length = 352
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 155/315 (49%), Gaps = 18/315 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL R +L +I+ + D++T L E K
Sbjct: 25 KSTFTIGTRKSKLALVQTDLVRDALKAAWPQYEFDILTKDAAADLDKVT--PLREFTSKN 82
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + +L
Sbjct: 83 LWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTLA 142
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177
+L S++GTSS+RR A L R + D RG I+TRL KL+ A++LA AG+
Sbjct: 143 ELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGLL 202
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 203 RTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAERN 262
Query: 236 FLAELDGSCKSAIA----GFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
L L+G C + + +G TL IV + DGK E+ + + + G
Sbjct: 263 LLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEI----EKVEKVTSGE 318
Query: 291 DAAQYIRFISNKNVF 305
+A + + ++++ V
Sbjct: 319 EAEVFAKKVADELVV 333
>gi|325526662|gb|EGD04197.1| porphobilinogen deaminase [Burkholderia sp. TJI49]
Length = 141
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+
Sbjct: 79 LENALADGRADLAVHSLKDVPMALPDGFSLAAIMSREDPRDAFVSNDYASLDALPAGAVV 138
Query: 128 GTS 130
GTS
Sbjct: 139 GTS 141
>gi|218673006|ref|ZP_03522675.1| porphobilinogen deaminase [Rhizobium etli GR56]
Length = 111
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 69/107 (64%)
Query: 200 QGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259
QGAICIE+ V + +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G +
Sbjct: 2 QGAICIESRVGDTGIDDLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDLI 61
Query: 260 YFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
F G+++ DG+ H V+ +G+R DA +G A Q +R + F+
Sbjct: 62 RFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARAGSAFFD 108
>gi|183220566|ref|YP_001838562.1| porphobilinogen deaminase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910676|ref|YP_001962231.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167775352|gb|ABZ93653.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778988|gb|ABZ97286.1| Porphobilinogen deaminase (PBG; Hydroxymethylbilane synthase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 511
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 41/311 (13%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IG R S L+ ++L + +K N I + GD+ L + GG+G+FT+
Sbjct: 6 KIGGRSSLLSRIQIHTVTNALKEKNK--DLNFETIFRESSGDKDLTTPLWQFGGQGIFTK 63
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
++++ L++ ++D +HS KDM K K + LPRED+RDV + + + +L
Sbjct: 64 DLQEDLLNHKVDIVIHSYKDMDLKERKETTLIPVLPREDVRDVLLFKKNKWI-NLPNEIT 122
Query: 127 IGTSSLRR----KALLLRW------RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
I TSS RR K L + +I + RG I+TRL K ++++ IL+A A +
Sbjct: 123 ILTSSPRREYHIKEFLRNYFPTPINNFEIKIESVRGNIQTRLRKYLDHESGGILVAKAAL 182
Query: 177 KRL--------------KKEKVIKEILNI--------EDFPPSPGQGAICIETHVNNPKA 214
R+ + +++IK+ +N+ FP +P QGA+C E +
Sbjct: 183 DRILNFQDPDQLLPELKEIQQLIKDTMNVSLFMVLPSSIFPSAPAQGALCAEIRKEDKHL 242
Query: 215 QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKI 272
+ L+ I+ +T + N ER L+ G C I + G + GI DG+I
Sbjct: 243 ETLLSKISDSETNLTTNEEREILSRYGGGCHQKIGVTVLHREYGKVCFIRGI--TEDGQI 300
Query: 273 FH--EVSRNGN 281
E+S + N
Sbjct: 301 LQTKELSESPN 311
>gi|76801314|ref|YP_326322.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Natronomonas pharaonis DSM 2160]
gi|76557179|emb|CAI48754.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Natronomonas pharaonis DSM 2160]
Length = 361
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LAL A +L + + ++ + T GD + + + +G G F
Sbjct: 5 IRLATRGSDLALRQAQRVADALDSRRR----TVELVEVETTGDAVRDELIHRLGKTGAFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++K+I G++D AVHS KDMPT+ L ++ R DV ++ +L L +
Sbjct: 61 RSLDEKVIDGDVDAAVHSMKDMPTEFPDELVVAGVPERASPGDVLVTPDGDTLDSLPDGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
+GTSSLRRKA LL R D+ V RG ++TR+ KL
Sbjct: 121 TVGTSSLRRKAQLLAARPDLDVQPLRGNVDTRVQKL 156
>gi|293194091|ref|ZP_06609931.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces odontolyticus F0309]
gi|292819785|gb|EFF78795.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces odontolyticus F0309]
Length = 177
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAF-------ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR 53
M + F +GTR S LALA + E + L + ++ N+ ++ T GD ++
Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRV---NLEVV--RTHGD-VSAE 54
Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113
L +GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD +
Sbjct: 55 PLAALGGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAA 114
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN 163
+L L +++GT S RR A +L R D+ V D RG + TRL+++
Sbjct: 115 DGATLASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRG 164
>gi|159483239|ref|XP_001699668.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
gi|158281610|gb|EDP07364.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
Length = 380
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 11/234 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVI--IPLSTKGDRITNRTLTEIGG 60
++P I TR S LA + + L+ ++ + + + L+++GD +L +G
Sbjct: 60 QRPLVIATRPSKLAKEQTRQVQQLLLAAAQLKDEQLQLSTLELASRGDTTQGVSLRSLG- 118
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G FTEE+++ ++SG D +VHS KD P L GL ++A LPR D RDV I+ A SL +
Sbjct: 119 SGAFTEELDQAVLSGAADMSVHSLKDCPAALAPGLLLAACLPRADPRDVLIAPEATSLGE 178
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSS RR A + + V+ RG +++RL ++ + A +LA AG+KRL
Sbjct: 179 LVPGSRVGTSSSRRAAQIKHSFPHLQVVQLRGNVDSRLGRIRSRDIGATVLAAAGLKRLG 238
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
++N D + GA+ + ++ L+ I+H T V ER
Sbjct: 239 -------VMN-SDEGDTTATGAVGVVCRADDEWVVGLLDAISHRGTALEVAAER 284
>gi|62999515|gb|AAY25186.1| putative porphobilinogen deaminase [Streptomyces nodosus subsp.
asukaensis]
Length = 167
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP R+GTR S LA+A + + V ++ + ++ ++T GD I+ L +IGG G+
Sbjct: 13 KPLRLGTRRSKLAMAQSGMVADA---VSEVTGRAVELVEVTTYGD-ISREHLAQIGGTGV 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ + + L
Sbjct: 69 FVAALRDALLRGEVDFAVHSLKDLPTAQPEGLVLAAVPVREDPRDVLVARDGLTFEQLPS 128
Query: 124 HSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRL 158
+ IGT S RR A L + DI + RG ++TR+
Sbjct: 129 GARIGTGSPRRMAQLNAYARNHGLDIETVPIRGNVDTRI 167
>gi|47200553|emb|CAF87716.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 28/174 (16%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P ++ I+ +ST GD+I + L++IG K LFT+E+E L E+D VHS KD+PT L
Sbjct: 20 PDVHLEIVAMSTIGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPP 79
Query: 94 GLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150
G I A L RE+ D + H ++L L HSVIGTSSLRR A L + + D
Sbjct: 80 GFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGTSSLRRAAQLKKRFPHLDFKDI 139
Query: 151 ------------------------RGKIETRLNKLNNNKAH-AILLAYAGIKRL 179
RG + TRL KL+ + AI+ A AG++R+
Sbjct: 140 VSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKEDFAAIISAAAGLRRM 193
>gi|282892112|ref|ZP_06300587.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498007|gb|EFB40351.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 221
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+ R SPL+ A E + +L H P ++ + ++T GD+ +L + FT+E
Sbjct: 1 MAARESPLSKAQVLEVQQALHPHH--PMIELIPVWVATTGDKQQEISLRNMEKTDFFTKE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++ L+SG+ D AVHSAKD+P L +GL + A D RDV + SL L ++I
Sbjct: 59 LDALLLSGQCDVAVHSAKDLPDPLPQGLSLIALTEGVDNRDVLVIREGLSLAALPQAAMI 118
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
TSS RR+ R+D +D RG I RL+ L A I++A A + RL + +
Sbjct: 119 ATSSERREQQARMLRTDFRFMDLRGTIGQRLSLLEAGVADGIIVAEAALIRLGLCHLNRV 178
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
L E +P QG + I + + +E+ ++ E
Sbjct: 179 YLPGET---APMQGRLAILAKTEHVEMREIFACLDAE 212
>gi|307826231|ref|ZP_07656440.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732693|gb|EFO03561.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 155
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 78/135 (57%)
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +++P+
Sbjct: 1 TRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIDDPEIN 60
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
E++ ++ +T V ERA A L G C+ IAGFA +G L+ G+V + DG + +
Sbjct: 61 EMLSALHDSETGLCVAAERAMNARLSGGCQVPIAGFATMQGEQLFMRGLVGSPDGSVIYR 120
Query: 276 VSRNGNRCDAINIGR 290
R + A IG+
Sbjct: 121 AERTDSVDSAEAIGK 135
>gi|297170589|gb|ADI21615.1| porphobilinogen deaminase [uncultured myxobacterium HF0130_06F04]
Length = 197
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRRKA LL R D+ ++D RG + TR NK + + A++LA AG+ RL+ K +
Sbjct: 15 VGTSSLRRKAHLLSKRPDLVMVDIRGNVPTRFNKAVSGELDAVILAEAGLTRLEMGKQAE 74
Query: 187 E------ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ P+P QGA+ I+T ++ +A +K ++H T V ER L E
Sbjct: 75 NQGVRLVPIDVASVCPAPAQGALAIQTRSDDERAHAALKALHHPGTAACVEVERLLLGEF 134
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
G C + + +V + DG E GN
Sbjct: 135 GGGCHLPLGAHCTVENGEYTLVALVASPDGGERFEARSTGN 175
>gi|47779350|gb|AAT38579.1| predicted porphobilinogen deaminase [uncultured gamma
proteobacterium eBACHOT4E07]
Length = 286
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 28/254 (11%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR S LALA E + + I + I I + T+GD +++ T + K F
Sbjct: 2 TLKIATRSSKLALAQVDE----FVSEYNISDYKI--IKIKTEGDVKSSKGET-LFDKAHF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQSLKD 120
+I+K ++ G+ D AVHSAKD P K G++ + + R +DV I ++ S+K
Sbjct: 55 VTDIQKSILRGDADIAVHSAKDTPAKKTNGIERNFIISRTS-KDVLIFKDNNNFNSSMK- 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+GTSSLRRK + +V D G ++TRL KL I+LA AG++RL+
Sbjct: 113 ------LGTSSLRRKLQAFHFLKSTNVFDINGNVDTRLEKLYRGDYDCIILAKAGLERLR 166
Query: 181 KEKVIKEILNIE--DFPPSPGQGAICI---ETHVNNPKAQELVKVINHEDTWDSVNCERA 235
K LN E D+ + GQG + + E++ N K E+ I ++ + + ER
Sbjct: 167 LLKE----LNYEEMDWITASGQGTLAVEMTESYHENEKLLEIHSNIKNKLATNGIEYERN 222
Query: 236 FLAELDGSCKSAIA 249
L +D C SAIA
Sbjct: 223 ILERVDAGCNSAIA 236
>gi|315186776|gb|EFU20534.1| uroporphyrin-III C-methyltransferase [Spirochaeta thermophila DSM
6578]
Length = 661
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
L +GDR L + G FT+ +++ L+ G ID A+HSAKD+P L +GL ++A P
Sbjct: 31 LHPRGDRDKRTPLHLVEGSDFFTDALDEALLVGRIDVALHSAKDLPDDLREGLSLAAITP 90
Query: 103 REDIR-DVFISH----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
E R DV + H +A S+++L IGTSS RR+ L RSD ++D RG IE R
Sbjct: 91 LEGPREDVLVLHPRWASASSVEELPAGLRIGTSSARRREQLSHLRSDWELVDIRGTIEER 150
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE-DFPPSPGQGAICIETHVNNPKAQE 216
L ++++ + +++A ++ E+ ++ F P P QG + + +A
Sbjct: 151 LARVSSGEIDGVVMAAL-----ALTRLALEVPHLPLPFVPHPLQGRLAAVVREGDEEAHR 205
Query: 217 LVKVINHEDTWDSV 230
L V++ W V
Sbjct: 206 LCDVLDDRGRWGRV 219
>gi|25010019|gb|AAN71175.1| GH12864p [Drosophila melanogaster]
Length = 558
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 14/192 (7%)
Query: 95 LQISAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151
+ I A L RED RD + + ++ L SVIGTSSLRR A + R ++V D R
Sbjct: 1 MAIGAVLEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIR 60
Query: 152 GKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
G + TRL KL+ ++K I+LA AG+ R+ I ++L D + GQGA+ +E
Sbjct: 61 GNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRA 120
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST---------LY 260
N+ + +++ + +T + ER+FL L G C + +A ++ KG L
Sbjct: 121 NDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLS 180
Query: 261 FYGIVLASDGKI 272
G V + DG I
Sbjct: 181 LTGAVWSLDGAI 192
>gi|317471679|ref|ZP_07931020.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA]
gi|316900783|gb|EFV22756.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA]
Length = 139
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 82/135 (60%), Gaps = 6/135 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIG 59
ME K RIG+R S LA+A +TR + + P + ++ L T GD+I N+TL +IG
Sbjct: 1 MEPKRLRIGSRESLLAVA---QTRLVIEQLKANYPELSFELVTLKTTGDKILNKTLDKIG 57
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ +
Sbjct: 58 GKGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFE 117
Query: 120 DLALHSVIGTSSLRR 134
+ VIG+SS RR
Sbjct: 118 EFG--QVIGSSSARR 130
>gi|70933882|ref|XP_738249.1| porphobilinogen deaminase [Plasmodium chabaudi chabaudi]
gi|56514312|emb|CAH88223.1| porphobilinogen deaminase, putative [Plasmodium chabaudi chabaudi]
Length = 144
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITNRTLTEIGGK 61
K IGTR SPLA+ + + + L+ K NI +I P+ T GD+I ++T+ GGK
Sbjct: 24 KEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINQNINVILKPIKTTGDKILDKTVGSFGGK 83
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+E++ +LI +D VHS KD+PT L + +S +L R+ I D F+S +SL D+
Sbjct: 84 GIFTKELDDELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLHDI 143
>gi|116332455|ref|YP_802172.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
gi|116127322|gb|ABJ77414.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 542
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 125/301 (41%), Gaps = 34/301 (11%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LA + +L K P I + GD L ++G +G+FT
Sbjct: 5 LKIASRKSALAKLQTYLVLDALK--KKFPNIQIELHFREASGDLDLQTPLWKMGTRGVFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+
Sbjct: 63 QDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKNFPSEL 122
Query: 126 VIGTSSLRRK---------ALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
I TSS RR+ +L R++ S + + RG I+TR+ K N+ + ++LA A
Sbjct: 123 KIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWGNSDSDGLVLAKAA 182
Query: 176 IKRLKKE--------------KVIKEILNIEDF--------PPSPGQGAICIETHVNNPK 213
+ RL E K +KEIL F P +P QGAI E ++
Sbjct: 183 LDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVRTDDEW 242
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
A V+ ++ + +V ER L G C I K Y L G+I
Sbjct: 243 ALSFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGLTDSGEIL 302
Query: 274 H 274
Sbjct: 303 E 303
>gi|266622116|ref|ZP_06115051.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Clostridium hathewayi DSM 13479]
gi|288866179|gb|EFC98477.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Clostridium hathewayi DSM 13479]
Length = 107
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LA+ +L V P I+ T+GDRI N+ L E GGKG+
Sbjct: 3 KTIRIGTRKSALAMVQTELVAEALKQVQ--PGLETRIVTKVTEGDRILNKPLLEFGGKGV 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
F E E+ L +GEID AVHSAKD+P L GL I A PRED RDV
Sbjct: 61 FVTEFEQALQNGEIDFAVHSAKDLPMDLEDGLGIVAVPPREDPRDVL 107
>gi|300726136|ref|ZP_07059593.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Prevotella bryantii B14]
gi|299776606|gb|EFI73159.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Prevotella bryantii B14]
Length = 226
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 97/205 (47%), Gaps = 10/205 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD-RITNRTLTEIGG 60
E P R+ R S L+ E + L D+ P+ IV T GD R+ L
Sbjct: 6 ELAPIRVIARRSKLSQLQVAEVFNRLKDI----PYTIVFT--DTFGDKRLDLSLLNGEAP 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+FT E++ L+ + D A+HSAKD+P L L++ A D D +S L D
Sbjct: 60 DDMFTRELDWALLHDDADIAIHSAKDLPEHLHPDLEVIALYEAFDKTDALVSRDHIKLMD 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSS RK L R D+ ++ RG IE R+ ++ + K ++A +KRL
Sbjct: 120 LPAGSTVGTSSPLRKKGLSELRPDLKIVGIRGCIEDRVAQVRDGKLDCAIVATCALKRLG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICI 205
E I EIL FP P QG + I
Sbjct: 180 MEDEITEILP---FPTHPMQGRLAI 201
>gi|116329566|ref|YP_799285.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116122459|gb|ABJ80352.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
Length = 542
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 125/301 (41%), Gaps = 34/301 (11%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LA + +L K P I + GD L ++G +G+FT
Sbjct: 5 LKIASRKSALAKLQTYLVLDALK--KKFPNIQIELHFREASGDLDLQTPLWKMGTRGVFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+
Sbjct: 63 QDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKNFPSEL 122
Query: 126 VIGTSSLRRK---------ALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
I TSS RR+ +L R++ S + + RG I+TR+ K N+ + ++LA A
Sbjct: 123 KIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWRNSDSDGLVLAKAA 182
Query: 176 IKRLKKE--------------KVIKEILNIEDF--------PPSPGQGAICIETHVNNPK 213
+ RL E K +KEIL F P +P QGAI E ++
Sbjct: 183 LDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVRTDDEW 242
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
A V+ ++ + +V ER L G C I K Y L G+I
Sbjct: 243 ALGFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGLTDSGEIL 302
Query: 274 H 274
Sbjct: 303 E 303
>gi|46445906|ref|YP_007271.1| porphobilinogen deaminase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399547|emb|CAF22996.1| putative Porphobilinogen deaminase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 233
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 4 KPFRI--GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+P+ I G R SPL+ A E +L + P I T GD +L ++
Sbjct: 14 QPYSISVGARSSPLSRAQVQEILKALRSFY--PSIEFTISYFDTIGDLDQKTSLRDLDKT 71
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
FT+EI++ ++ + +HSAKD+P + GLQ+ D DV + ++L+ L
Sbjct: 72 NFFTKEIDEAILQKKCQIGIHSAKDLPDPIPDGLQLICLTKGVDCSDVLVLRDGETLQTL 131
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
HS I TSS+RR+ ++ R+D +D RG I RL L +A +++A A + RL
Sbjct: 132 PPHSRIATSSIRRENIVKLLRNDFIFLDLRGTIHQRLALLEKKQADGVVVAEAALIRLGL 191
Query: 182 EKVIKEILNIEDFPPSP--GQGAICIETHVNNPKAQELVKVIN 222
LN P + GQG + I ++ K Q L ++
Sbjct: 192 TH-----LNRIRLPGTTVEGQGQLAIIARKDDAKMQTLFACLD 229
>gi|225016972|ref|ZP_03706164.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum
DSM 5476]
gi|224950286|gb|EEG31495.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum
DSM 5476]
Length = 292
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 5/235 (2%)
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
L +E+ LI +D AV+ A D+P +L L I A RED+RD + + D +
Sbjct: 61 LVARRLEQALIDCRVDLAVYHALDLPLELHPELPIVAISSREDVRDALVFPQGKQQPDFS 120
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IG +S R++ L R D G + +L +L+ + A++L A + +
Sbjct: 121 --KPIGCTSRRQQVQLHRVFPDCITAPVGGTVAEQLARLDQGEYGALVLPAAQLGWFGLQ 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + ++ +E+ P+ G AI ++ L++ + D+WD+V CER F L+
Sbjct: 179 QRVGQLFCVEELVPAAGHAAIAVQAREEFDAG--LLECFHSWDSWDAVFCEREFARALEE 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IA A KG TL G I+ S +G+R DA +G + A ++
Sbjct: 237 E-PGPIAVHAEVKGETLSVVGFYADEAEGIYRMSSMSGDRKDAGRLGFELAAELK 290
>gi|307254893|ref|ZP_07536715.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306862134|gb|EFM94106.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
Length = 174
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%)
Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204
+ V RG + TRL+KL+N + AI+LA AG+ RL + I+ +++E P+ GQGA+
Sbjct: 7 LEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMPERIRSFISVEQSLPAAGQGAVG 66
Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264
IET V++ + + +NH T V ERA L G C+ I GFA G+ + +
Sbjct: 67 IETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQGGCQVPIGGFATLNGNEITLNAL 126
Query: 265 VLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
V A DG S +R +A +G A+ +
Sbjct: 127 VGALDGSNIIRASGVADRENAEQLGISVAEQL 158
>gi|148693634|gb|EDL25581.1| mCG10727, isoform CRA_b [Mus musculus]
Length = 208
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L E+D VHS KD+PT L G I A RE+ D + H K L
Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLE--- 135
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKV 184
RG + TRL KL+ + AI+LA AG++R+ +
Sbjct: 136 -----------------------TLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQNR 172
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
+ +IL+ E+ + GQ A+ +E + +LV V
Sbjct: 173 VGQILHPEECMYAVGQVALAVEVRAKDQDILDLVSV 208
>gi|119587852|gb|EAW67448.1| hydroxymethylbilane synthase, isoform CRA_b [Homo sapiens]
Length = 171
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 5/137 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT+
Sbjct: 22 RVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFTK 79
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLAL 123
E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L
Sbjct: 80 ELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPE 139
Query: 124 HSVIGTSSLRRKALLLR 140
SV+GTSSLRR A L R
Sbjct: 140 KSVVGTSSLRRAAQLQR 156
>gi|212550635|ref|YP_002308952.1| hydroxymethylbilane synthase/uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548873|dbj|BAG83541.1| hydroxymethylbilane synthase/uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 682
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR-----------IT 51
K R+ +R SPL+L E S P + +I + + GD+ ++
Sbjct: 8 KGNLRVISRNSPLSLLQVKEVFSFF------PNIDYQLITIESFGDKNKHVALFDISNVS 61
Query: 52 NRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111
+ L E FT E+++ LI + D AVHSAKD+P L L++ A D D I
Sbjct: 62 SFFLEEESISDFFTRELDEALIYNKADIAVHSAKDLPYPLPYDLELFALFQAMDKSDSLI 121
Query: 112 SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171
S +L+ L + +GTSS +RK LL+ R D+ V+ RG IE R+ K++N A+++
Sbjct: 122 SRNNLTLEQLPPRARVGTSSQKRKTELLKIRPDLEVVSIRGNIEERIAKMDNGFIDALIV 181
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
A + RL E I IL F QG + I N+ + L
Sbjct: 182 ATCALIRLGMEARIACIL---PFETHSLQGNLAIVGRKNDKNVKNL 224
>gi|297180918|gb|ADI17122.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0070_03O15]
Length = 297
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 123/265 (46%), Gaps = 48/265 (18%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64
+I TR S LAL + +S IP II + T+GD+ + + E+ K F
Sbjct: 1 MKIATRSSKLALEQTYFFQSW------IPKQPTKIIEIKTEGDKKS--AMGEVLFDKANF 52
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPR---------EDIRDVFISHTA 115
+IE+ LI D A+HSAKDMP K L + PR +DI VF
Sbjct: 53 VSDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPRSRSDLLIFRKDIDPVF----- 107
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
KD+ L GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG
Sbjct: 108 --KKDMKL----GTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAG 161
Query: 176 IKRLKKEKVIKEILNIEDFP--PSPGQGAICIETHVNNPKAQE---------LVKVINHE 224
+RL K+ E LN + GQG + ++ +N A+E L +VI+
Sbjct: 162 CQRL---KIDFEDLNYIELGHLTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIH-- 216
Query: 225 DTWDSVNCERAFLAELDGSCKSAIA 249
D E+ L ++ SC SAIA
Sbjct: 217 ---DETEMEKRLLEKIGASCNSAIA 238
>gi|297181506|gb|ADI17693.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0130_23I23]
Length = 297
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 143/322 (44%), Gaps = 58/322 (18%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64
+I TR S LAL + +S IP II + T+GD+ + + E+ K F
Sbjct: 1 MKIATRSSKLALEQTYFFQSW------IPKQPTKIIEIKTEGDKKS--AMGEVLFDKANF 52
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPR---------EDIRDVFISHTA 115
+IE+ LI D A+HSAKDMP K L + PR +DI VF
Sbjct: 53 VSDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPRSRSDLLIFRKDIDPVF----- 107
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
KD+ L GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG
Sbjct: 108 --KKDMKL----GTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAG 161
Query: 176 IKRLKKEKVIKEILNIEDFP--PSPGQGAICIETHVNNPKAQE---------LVKVINHE 224
+RL K+ E LN + GQG + ++ +N A+E L +VI+
Sbjct: 162 CQRL---KIDFEDLNYIELGHLTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIH-- 216
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGN 281
D E+ L ++ SC SAIA A +G G+ G+I+ +S G
Sbjct: 217 ---DETEMEKRLLEKIGASCNSAIAVRANHEGPK----GVDKIIKGEIYGLNEYISFEGK 269
Query: 282 RCDAINIGRDAAQYIRFISNKN 303
D DA I + NKN
Sbjct: 270 SSDVDTAINDA---IDMLQNKN 288
>gi|209732910|gb|ACI67324.1| Porphobilinogen deaminase [Salmo salar]
Length = 174
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K LFT
Sbjct: 20 IRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 77
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKDLA 122
+E+E L E+D VHS KD+PT L G I A L RE D + H S L L
Sbjct: 78 KELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLDTLP 137
Query: 123 LHSVIGTSSLRRKALL 138
SVIGTSSLRR A L
Sbjct: 138 DGSVIGTSSLRRAAQL 153
>gi|297620494|ref|YP_003708631.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia
chondrophila WSU 86-1044]
gi|297375795|gb|ADI37625.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia
chondrophila WSU 86-1044]
Length = 472
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+ R SPL+ A E L + I P + ++T GDR +L + FT
Sbjct: 61 VAARSSPLSEAQVDEI---LYEAQLIQPTLEFEVTLVTTLGDRDQESSLRTLEKTDFFTR 117
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
+I++ L++G AVHSAKD+P + GL I A D D + +L L +
Sbjct: 118 DIDQLLLNGYCRIAVHSAKDLPDPIPNGLNIIAVNQGLDPSDSLVMRPGDTLSSLPKGAK 177
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TSS+RR+ + RSD+ V+D RG I RL KLN+ + +++A + + RL + +
Sbjct: 178 IATSSIRREKAVHSLRSDLEVVDIRGNIGQRLQKLNDREVDGVIVAESALIRLNLYHLNR 237
Query: 187 EILNIEDFPPSPGQGAICI 205
L E +PGQG + +
Sbjct: 238 IHLPGET---APGQGKLAV 253
>gi|222480661|ref|YP_002566898.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239]
gi|222453563|gb|ACM57828.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239]
Length = 385
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LAL A R +L + ++ + + T+GD+I + + +G G F
Sbjct: 5 LRLATRGSDLALRQAGTVRDALSSRRR----DVELRRVETRGDQIPDEMIHRLGKTGAFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++++++ G+ D AVHS KD+PT+ + + I+ R DV + ++DL S
Sbjct: 61 RALDEEVLGGDADLAVHSLKDVPTEGMDDMVIAGVPERAPSGDVLVHPDGLGIEDLPSGS 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
V+GT SLRR A + R D+ V RG ++TR+ KL
Sbjct: 121 VVGTGSLRRTAQIKAARPDLVVEPLRGNVDTRVEKL 156
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQG 201
SD+ K+ET + AI+LA AG++R + +V L E+F P+ GQG
Sbjct: 214 SDLERSAMERKVETEYD--------AIVLAEAGLRRSELFYEVPTTRLPREEFVPAAGQG 265
Query: 202 AICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
AI + +P E V+ ++H T +V ER L EL+G C + I A +G ++
Sbjct: 266 AIAV--TATDPDVIEDVRSAVDHPRTRVAVTVERTILGELNGGCVAPIGVSALVQGEHVH 323
Query: 261 FYGIVLASDG 270
VL++DG
Sbjct: 324 TRVRVLSTDG 333
>gi|325118217|emb|CBZ53768.1| putative porphobilinogen deaminase [Neospora caninum Liverpool]
Length = 683
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
+ I+PL T GD + L ++GGKGLFT+E++ L++G++D VHS KD+PT+L G +
Sbjct: 239 ELCIVPLQTTGDSALHLPLAQLGGKGLFTKELDVALLAGQVDVVVHSMKDVPTELPPGTE 298
Query: 97 ISAYLPREDIRDVFI 111
I A+LPRED RD FI
Sbjct: 299 IGAFLPREDPRDAFI 313
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 126 VIGTSSLRRKALL--LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180
+ GT SLRR+ALL L ++ RG ++TR+ ++ K A LLA AG+KRL
Sbjct: 411 IFGTCSLRRQALLHALLPPGSFHLMGLRGNVQTRMRRIEEGKLDATLLAAAGLKRLCLLP 470
Query: 181 -------------------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
+ V +L E F P+ QG + ++ + +
Sbjct: 471 SLLSPSRDSGPLASPLGCVSTHARGRACVEAVLLPAEVFVPAVCQGVVGVQCRSADTRIL 530
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
L+ +N + CERAFL LDGSC++ IAG A +G T
Sbjct: 531 SLLHSLNSLSSRGQARCERAFLRALDGSCRTPIAGIAQWRGVT 573
>gi|15835189|ref|NP_296948.1| porphobilinogen deaminase [Chlamydia muridarum Nigg]
gi|270285361|ref|ZP_06194755.1| porphobilinogen deaminase [Chlamydia muridarum Nigg]
gi|270289377|ref|ZP_06195679.1| porphobilinogen deaminase [Chlamydia muridarum Weiss]
gi|301336758|ref|ZP_07224960.1| porphobilinogen deaminase [Chlamydia muridarum MopnTet14]
gi|11386847|sp|Q9PK95|HEM3_CHLMU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|7190611|gb|AAF39408.1| porphobilinogen deaminase HemC, putative [Chlamydia muridarum Nigg]
Length = 242
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ K P R+ +R SPLA+ A E L P +I +T+GD + L +
Sbjct: 16 LGKIPLRLASRKSPLAVLQAHECLRRLQTF--FPRLWGQVITETTQGDLDQHTPLHSVEN 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G FT++I+ + SG+ D A+HSAKD+P K ++ A D RD+ + L+
Sbjct: 74 TGFFTDDIDFLVQSGKCDLAIHSAKDLPEK--PKARVIAITASIDPRDILVFQEKYLLQP 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
IG SS RR+AL+ + D RG I+TRL L+ K AI++A A + RL
Sbjct: 132 FPSRLRIGCSSDRRRALISSLYPSAVITDIRGTIQTRLALLDQQKFDAIVMANAAVSRLG 191
Query: 181 KEKVIKEILNIEDFPP-SPGQGAICIET 207
+L PP P QG + I +
Sbjct: 192 LRLPCTVVLP----PPYHPFQGRLAITS 215
>gi|237833021|ref|XP_002365808.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49]
gi|211963472|gb|EEA98667.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49]
Length = 729
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
+ I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS KD+PT+L +G +
Sbjct: 265 ELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHSLKDVPTELPEGTE 324
Query: 97 ISAYLPREDIRDVFI 111
I AYLPRED RD I
Sbjct: 325 IGAYLPREDPRDALI 339
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 42/188 (22%)
Query: 127 IGTSSLRRKALL--LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL----- 179
IGT SLRR+ALL L S ++ RG ++TR++++ A LLA AG+KRL
Sbjct: 442 IGTCSLRRQALLYALLPPSSFQLMGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLLSA 501
Query: 180 -------------------------KKEKVIKEILNIED-FPPSPGQGAICIETHVNNPK 213
+ ++ +L D F P+ QG I ++ +
Sbjct: 502 MLAPSPSATPSPCPASSPNEASRGTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSADTG 561
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L++ +N + CERAFL LDGSC++ IAG A + + + G+
Sbjct: 562 ILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIAGIAEWR---------AVPAQGEAP 612
Query: 274 HEVSRNGN 281
S+NG+
Sbjct: 613 RPQSQNGS 620
>gi|147899551|ref|NP_001088263.1| hydroxymethylbilane synthase [Xenopus laevis]
gi|54038668|gb|AAH84265.1| LOC495094 protein [Xenopus laevis]
Length = 256
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAI 169
+ + +L L SVIGTSSLRR A L + + D RG + TRL KL+ + AI
Sbjct: 22 LKKSGNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLDEQEDFSAI 81
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AG++R+ E I +IL ++ + GQGA+ +E + +V + +T
Sbjct: 82 VLAAAGLRRMGWENRIGQILTSDECLYAVGQGALAVEVRTKDQDILSMVSALQDPETVLR 141
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270
ERAF+ L+G C +A K LY G V + DG
Sbjct: 142 CVAERAFMKRLEGGCSVPVAVSTVVKDLQLYLTGAVYSLDG 182
>gi|70780272|gb|AAZ08387.1| porphobilinogen deaminase [Toxoplasma gondii]
Length = 747
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
+ I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS KD+PT+L +G +
Sbjct: 268 ELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHSLKDVPTELPEGTE 327
Query: 97 ISAYLPREDIRDVFI 111
I AYLPRED RD I
Sbjct: 328 IGAYLPREDPRDALI 342
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 42/188 (22%)
Query: 127 IGTSSLRRKALL--LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL----- 179
IGT SLRR+ALL L S ++ RG ++TR++++ A LLA AG+KRL
Sbjct: 445 IGTCSLRRQALLYALLPPSSFQLMGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLLSA 504
Query: 180 -------------------------KKEKVIKEILNIED-FPPSPGQGAICIETHVNNPK 213
+ ++ +L D F P+ QG I ++ +
Sbjct: 505 MLAPSPSATPSPCPAPSPNETSRGTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSADTG 564
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L++ +N + CERAFL LDGSC++ IAG A + + + G+
Sbjct: 565 ILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIAGIAEWR---------AVPAQGEAP 615
Query: 274 HEVSRNGN 281
S+NG+
Sbjct: 616 RPQSQNGS 623
>gi|262277145|ref|ZP_06054938.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane
synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha
proteobacterium HIMB114]
gi|262224248|gb|EEY74707.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane
synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha
proteobacterium HIMB114]
Length = 492
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 126/291 (43%), Gaps = 31/291 (10%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG+R S LA F + L K STKGD+ + G G+FT
Sbjct: 7 IGSRASFLAKIQTFIVKQELKKKIKNIKITTKY--HSTKGDKNQGHMPWKNLGYGIFTTS 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+ +LI+ +C VHS KD+P +LK + R+D RDV + ++
Sbjct: 65 LTNELINKNFNCVVHSYKDLP--VLKSKTDYYVITRDDPRDV---LLVKKKCLNKKKFIV 119
Query: 128 GTSSLRRKALL-----LRWRSDISVIDFRGKIETRLNK-LNNNKAHAILLAYAGIKRL-- 179
GTSS RRK+ + L DI RG + TRL K ++ N+ A+ +A A I R+
Sbjct: 120 GTSSPRRKSSVKDLKDLTGIKDIKTKTIRGNVTTRLLKVISKNQYDAVFMAKAAIDRIFK 179
Query: 180 ---KKEKV-IKEILNI-----------EDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
K +KV K+ LN+ FP + QGAI +E N+ K + + IN +
Sbjct: 180 YGNKVDKVETKKFLNLFKKFKPFILPLSIFPTAASQGAIAVEYLKNDKKTKSTLNKINCK 239
Query: 225 DTWDSVNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFH 274
T N ER+ L + G C I K + F V A + K FH
Sbjct: 240 KTLSICNQERSLLKKYGGGCGLDIGITIEEIKNNNFLFSKGVDARNKKEFH 290
>gi|258567590|ref|XP_002584539.1| porphobilinogen deaminase [Uncinocarpus reesii 1704]
gi|237905985|gb|EEP80386.1| porphobilinogen deaminase [Uncinocarpus reesii 1704]
Length = 287
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 57/292 (19%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K + IGTR SPLAL
Sbjct: 5 ERKTYTIGTRKSPLALVQ------------------------------------------ 22
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
T+ + + L + +C + +PT++ + A +PRE+ RDV + +L
Sbjct: 23 ---TDLVRRALQTAYPNCDLKVHGHVPTQIPDACVLGAMMPRENPRDVLVIKKGLPWMTL 79
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL+ +++A AG+
Sbjct: 80 AELPAGSVVGTSSVRRTAQLARHYPHLVVQDIRGNIDTRLAKLDAEDGPFTCLIMAAAGL 139
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R E + + L+ ++ + GQGA+ IE ++ +++V I T + ER
Sbjct: 140 LRTGHENRVTQYLDSKNGKMLHAVGQGALGIEVRTDDEVMKDMVNKIGDMPTTYACMAER 199
Query: 235 AFLAELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVSRNGN 281
L ++G C + + S L IV++ DGK E+ ++G+
Sbjct: 200 NLLRTVEGGCSAPLGVETEWIQDDNGKSLLRLRAIVVSVDGKEAVELEKDGD 251
>gi|260829671|ref|XP_002609785.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae]
gi|229295147|gb|EEN65795.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae]
Length = 140
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
II +ST GD+I + L++IG K LFT+E+EK L G +D VHS KD+ + L + I A
Sbjct: 22 IISMSTTGDKILDTALSKIGEKSLFTKELEKALDDGRVDFVVHSLKDLQSTLPPNMVIGA 81
Query: 100 YLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLR 140
L RED D + H + L DL +SVIGTSS+RR A L R
Sbjct: 82 VLEREDPYDAVLMHPKHATKCLADLPENSVIGTSSVRRVAQLKR 125
>gi|297170259|gb|ADI21296.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0010_09F21]
Length = 282
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 32/237 (13%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89
+ +I + VI + TKGD+ + + T+ K F ++IE+K+ SG+ID AVHSAKD+P
Sbjct: 1 MEEIGIEDYVIEKIVTKGDKESAKGRTQFD-KLNFVQDIEEKISSGDIDIAVHSAKDLPA 59
Query: 90 KLLKGLQISAYLPREDIRDVF------ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
K + + RE D+ I ++ K + ++GTSSLRRK
Sbjct: 60 TESK--EFDYFYLRESTEDISTWSSDRIIFRDKNKKKFSSEMILGTSSLRRKMQAKFLLG 117
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE----DFPPSPG 199
+ G I+TR+ KLN+ + I+LA AG RL N+ DF
Sbjct: 118 AEKIFSLNGNIDTRIRKLNSGEYDCIILANAGCTRLG--------FNLNSYNLDFLTPSA 169
Query: 200 QGAICIETHVNNPKAQELVKVINH---EDTWD----SVNCERAFLAELDGSCKSAIA 249
QG IC++ K ++ K++N+ +D + ++ ++FL ++ C SAI+
Sbjct: 170 QGLICLQC----LKGTDISKMLNNFFDKDKYKIHKLGMDIYKSFLRNINADCNSAIS 222
>gi|3172401|gb|AAC18584.1| porphobilinogen deaminase [Lysinibacillus sphaericus]
Length = 109
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G+R S LAL + L P + + TKGD+I + L+++GGKGLF +E
Sbjct: 7 VGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGLFVKE 64
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
IE+ L EID AVHS KDMP L +GL I PRED RD FIS
Sbjct: 65 IEQALFDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFIS 109
>gi|42524803|ref|NP_970183.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100]
gi|39577013|emb|CAE78242.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100]
Length = 502
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S LA A+ +L + K P I + GD+ L +I KG+FT
Sbjct: 3 LRISARKSDLARLQAYMVGDALKE--KNPQIEIDYRFRESLGDKNLTDPLWKIPEKGVFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SH-----TAQS 117
E+ +L+ E D VHS KD+PT+ I+A LPR D RD+ + SH T+++
Sbjct: 61 EDFFGELLRDETDLVVHSWKDLPTEHKSETVIAATLPRADQRDLLLVKKSHFDKIKTSKT 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRW--------RSDISVIDFRGKIETRLNKL-NNNKAHA 168
LK + +SS RR+ L + D+ RG + TR+ KL + +
Sbjct: 121 LK-------VFSSSPRREYNLTGFFKEHLPFGLQDVKFESVRGNMLTRVRKLIESPETDG 173
Query: 169 ILLAYAGIKR---------LKKEKVIKEILNIEDF--------PPSPGQGAICIETHVNN 211
+++A A R L+ ++ +++ N ++ P + QGA+ +E +
Sbjct: 174 LIVAKAAFDRLFSATLPEFLEGQQQLRQYFNELNWVVLPLSVNPNAAAQGALAVEVLKSR 233
Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
Q+L++ I+H DT+ ER L+ G C I
Sbjct: 234 QDLQDLLQSIHHADTFHCSQKERDVLSSFGGGCHQKIG 271
>gi|255348660|ref|ZP_05380667.1| porphobilinogen deaminase [Chlamydia trachomatis 70]
gi|255503200|ref|ZP_05381590.1| porphobilinogen deaminase [Chlamydia trachomatis 70s]
gi|296434889|gb|ADH17067.1| porphobilinogen deaminase [Chlamydia trachomatis E/150]
gi|296438609|gb|ADH20762.1| porphobilinogen deaminase [Chlamydia trachomatis E/11023]
Length = 241
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 7/208 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+ +R S LA+ A E L P II +T+GD L + G F
Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
T++++ + SG+ D +HSAKD+P + I+A + D RD+ + H L
Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDLPENPKATVISITASI---DPRDILVFHEKYLSIPLPR 134
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG+SS+RRK LL + D RG I+TRL L AI++A A + RL
Sbjct: 135 RLRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRL 194
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNN 211
+IL + P G+ AI H+ +
Sbjct: 195 PCTKILP-PPYHPLQGRLAITASRHIRS 221
>gi|45655592|ref|YP_003401.1| porphobilinogen deaminase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602563|gb|AAS72038.1| porphobilinogen deaminase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 547
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 36/293 (12%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG+R S LA + +L K P + + GD+ L ++G KG+FT
Sbjct: 10 LKIGSRKSALAKLQTYLVLGALK--KKFPEIQVELFFREASGDQDLQTPLWKMGTKGVFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++ L+ ++D +HS KD+ + I L R D RDV + + K
Sbjct: 68 QDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKYSPSVL 127
Query: 126 VIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
I TSS RR+ L ++ S + + RG I+TR+ K + + ++LA A
Sbjct: 128 KIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLVLAKAA 187
Query: 176 IKRLKKE----------------------KVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ RL E + + +I + P +PGQGAI E +
Sbjct: 188 LDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVRTEDNW 247
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSC--KSAIAGFAYCKGSTLYFYGI 264
+ ++ ++ + +V ER L G C K ++ G LY G+
Sbjct: 248 VLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGVSILQKAYGKILYQRGL 300
>gi|294653592|ref|NP_714555.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str.
56601]
gi|293630693|gb|AAN51570.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str.
56601]
Length = 542
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 36/293 (12%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG+R S LA + +L K P + + GD+ L ++G KG+FT
Sbjct: 5 LKIGSRKSALAKLQTYLVLGALK--KKFPEIQVELFFREASGDQDLQTPLWKMGTKGVFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++ L+ ++D +HS KD+ + I L R D RDV + + K
Sbjct: 63 QDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKYSPSVL 122
Query: 126 VIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
I TSS RR+ L ++ S + + RG I+TR+ K + + ++LA A
Sbjct: 123 KIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLVLAKAA 182
Query: 176 IKRLKKE----------------------KVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ RL E + + +I + P +PGQGAI E +
Sbjct: 183 LDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVRTEDNW 242
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSC--KSAIAGFAYCKGSTLYFYGI 264
+ ++ ++ + +V ER L G C K ++ G LY G+
Sbjct: 243 VLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGVSILQKAYGKILYQRGL 295
>gi|15605020|ref|NP_219804.1| porphobilinogen deaminase [Chlamydia trachomatis D/UW-3/CX]
gi|76789021|ref|YP_328107.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13]
gi|255311101|ref|ZP_05353671.1| porphobilinogen deaminase [Chlamydia trachomatis 6276]
gi|255317402|ref|ZP_05358648.1| porphobilinogen deaminase [Chlamydia trachomatis 6276s]
gi|255506878|ref|ZP_05382517.1| porphobilinogen deaminase [Chlamydia trachomatis D(s)2923]
gi|301335770|ref|ZP_07224014.1| porphobilinogen deaminase [Chlamydia trachomatis L2tet1]
gi|11386778|sp|O84301|HEM3_CHLTR RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|3328714|gb|AAC67892.1| Porphobilinogen Deaminase [Chlamydia trachomatis D/UW-3/CX]
gi|76167551|gb|AAX50559.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13]
gi|296435816|gb|ADH17990.1| porphobilinogen deaminase [Chlamydia trachomatis G/9768]
gi|296436741|gb|ADH18911.1| porphobilinogen deaminase [Chlamydia trachomatis G/11222]
gi|296437676|gb|ADH19837.1| porphobilinogen deaminase [Chlamydia trachomatis G/11074]
gi|297140175|gb|ADH96933.1| porphobilinogen deaminase [Chlamydia trachomatis G/9301]
gi|297748428|gb|ADI50974.1| Porphobilinogen deaminase [Chlamydia trachomatis D-EC]
gi|297749308|gb|ADI51986.1| Porphobilinogen deaminase [Chlamydia trachomatis D-LC]
Length = 241
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+ +R S LA+ A E L P II +T+GD L + G F
Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T++++ + SG+ D +HSAKD+P + + D RD+ + H L
Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDLPEN--PKATVVSITASIDPRDILVFHEKYLSIPLPRR 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG+SS+RRK LL + D RG I+TRL L AI++A A + RL
Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNN 211
+IL + P G+ AI H+ +
Sbjct: 196 CTKILP-PPYHPLQGRLAITASRHIRS 221
>gi|89898473|ref|YP_515583.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56]
gi|89331845|dbj|BAE81438.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56]
Length = 243
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ ++P RI +R S LA A +E L P I I ++T+GD+ L I
Sbjct: 16 LGRRPLRIASRKSTLAKAQVYECVRLLRSW--FPKLWIQIQTVNTQGDKDKTTPLRLIEN 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
FT+ ++K ++SG AVHSAKD+P + I A D D+ + K
Sbjct: 74 SQFFTDAVDKLVLSGNSHLAVHSAKDLPNPPVT--TIIAITQGLDPADLLVYGNRYLWKR 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +G+SSLRR+ +L + ++ RG IE RL +L + K AI++A A RL
Sbjct: 132 FPKNPKLGSSSLRREEILKKLFPAGKILHIRGTIEERLEQLESGKYDAIIVAKAAALRLH 191
Query: 181 KEKVIKEILNIEDFPPS--PGQGAICIETHVNNPKAQELVKVINHED 225
++ E+ PP P QG + + N ++L+ +N D
Sbjct: 192 -----LKLPYTEELPPPYHPLQGRLSVTAAKNIESWKKLLYPLNTSD 233
>gi|294919063|ref|XP_002778511.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239886970|gb|EER10306.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA L ++ + + GD L ++ G+FT
Sbjct: 9 LRIGSRRSDLARLQTLMVADRLEEMG----YKVECEYQEAPGDTNLKDPLWKMPETGVFT 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ +KL+ G +D VHS KD+P G ++A LPR D RD+ I + A++
Sbjct: 65 TFLRQKLLDGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIRAMNG 124
Query: 126 --VIGTSSLRRK----ALLLRWRSDISVIDF---RGKIETRLNKLNN---------NKAH 167
++ +SS RR+ A L R + ++F RG I+TR+ KL + + H
Sbjct: 125 KLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHDASLGPRPH 184
Query: 168 AILLAYAGIKRLKK-----------------EKVIKEILNIEDFPPSPGQGAICIETHVN 210
A++LA A + R + K +L + P + QGA+ +E
Sbjct: 185 ALVLAKAAVDRFAQSHRGEFRNSRELVQGYLSKCHCMVLPLSANPTAAAQGALGVEVSTA 244
Query: 211 NPKA--QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ K +++V +N E T+ + E+ L G C I
Sbjct: 245 SEKGHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIG 285
>gi|62319114|dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 130
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDGSC
Sbjct: 5 VASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSC 64
Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296
++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 65 RTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQEL 119
>gi|329942690|ref|ZP_08291469.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci Cal10]
gi|332287285|ref|YP_004422186.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC]
gi|313847869|emb|CBY16864.1| putative porphobilinogen deaminase [Chlamydophila psittaci RD1]
gi|325506761|gb|ADZ18399.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC]
gi|328814950|gb|EGF84939.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci Cal10]
gi|328914531|gb|AEB55364.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci 6BC]
Length = 245
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 93/206 (45%), Gaps = 9/206 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ ++P RI +R S LA A E L P I I +ST+GD+ L +
Sbjct: 16 LGRRPLRIASRKSTLAQAQVHECVRLLRSW--FPKLWIQIHTISTRGDKDKTTPLRLVEN 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
FT+ ++K +I G AVHSAKD+P + A D D+ + K
Sbjct: 74 SQFFTDAVDKLVIRGNCHLAVHSAKDLPDP--PATPVVAITKGLDPSDLLVYAERYLWKR 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+G+SSLRR L + ++D RG IE RL +L N K AI++A A I RL
Sbjct: 132 FPKVPRLGSSSLRRGETLKTLFPEGRILDIRGTIEERLEQLENGKYDAIVIAKAAILRLH 191
Query: 181 KEKVIKEILNIEDFPP-SPGQGAICI 205
++L PP P QG + I
Sbjct: 192 LHLPYTKVLP----PPYHPLQGRLAI 213
>gi|294953467|ref|XP_002787778.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239902802|gb|EER19574.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA L ++ + + GD L ++ G+FT
Sbjct: 9 LRIGSRRSDLARLQTLMVADRLEEMG----YEVECEYQEAPGDTNLKDPLWKMPETGVFT 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ +KL+ G +D VHS KD+P G ++A LPR D RD+ I + A++
Sbjct: 65 TFLRQKLLEGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIRAMNG 124
Query: 126 --VIGTSSLRRK----ALLLRWRSDISVIDF---RGKIETRLNKLNN---------NKAH 167
++ +SS RR+ A L R + ++F RG I+TR+ KL + + H
Sbjct: 125 KLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHNASLGPRPH 184
Query: 168 AILLAYAGIKRLKK-----------------EKVIKEILNIEDFPPSPGQGAICIETHVN 210
A++LA A + R + K +L + P + QGA+ +E
Sbjct: 185 ALVLAKAAVDRFAQSHREEFRNSRELVEGYLSKCHCMVLPLSANPTAAAQGALGVEVSTA 244
Query: 211 NPK--AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ K +++V +N E T+ + E+ L G C I
Sbjct: 245 SEKEHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIG 285
>gi|269302924|gb|ACZ33024.1| porphobilinogen deaminase [Chlamydophila pneumoniae LPCoLN]
Length = 234
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 11/222 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+P RI +R S LA A E S L + P + T GDR L +
Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDRDKKIPLHLVENSY 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
FT+ ++ + G D A+HSAKD+P T L + I+ L D+ V+ H + L
Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDLPETPSLPVVAITRCLHPADLL-VYADHYVH--EPL 132
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL
Sbjct: 133 PLRPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLH- 191
Query: 182 EKVIKEILNIEDFPPSPG-QGAICIETHVNNPKAQELVKVIN 222
+ +IE PP QG++ I + K ++L I+
Sbjct: 192 ---LHHAYSIELPPPYHALQGSLAITAKDHAGKWKQLFTPIH 230
>gi|322782664|gb|EFZ10527.1| hypothetical protein SINV_04722 [Solenopsis invicta]
Length = 331
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 103 REDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
RED RD + ++L L SVIGTSSLRR A L R + + + RG + TRL
Sbjct: 44 REDPRDAVVMSKKFKDKTLSSLPKGSVIGTSSLRRSAQLSRNMPHLKIENIRGNLNTRLK 103
Query: 160 KLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
KL+ N AI+LA AG+KR+ E I ++L E+ + GQGA+ +E ++ + + L
Sbjct: 104 KLDDENGPYAAIILAAAGLKRMGWEDRISQLLEPEEALYAVGQGALGVECRQSDWEIRSL 163
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
++ + +T CER+FL L G C + +A + K + L G V + DG+
Sbjct: 164 LEPLFDLETTLRCVCERSFLKTLGGGCSAPVAVSSSLKENELTITGAVWSLDGQTL 219
>gi|323451311|gb|EGB07188.1| hypothetical protein AURANDRAFT_59094 [Aureococcus anophagefferens]
Length = 331
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 9/247 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT-EIGGKGLF 64
+I TR SPLA+ A +L P ++ +S+ G+ N L + F
Sbjct: 18 VKIATRPSPLAVKQAERVAETLR--RADPALTTELVRISSTGEYRNNTPLPLALDPTVDF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPR-EDIRDVFISHTAQSLKDL 121
T ++ + SG +D AVHS KD+P + L+++ +LPR E D + + + L +
Sbjct: 76 TGLLDDAVGSGAVDVAVHSLKDLPPANRWRGDLRVACHLPRTESAADALVGYASMDL--V 133
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT+S RR+ALL R D+ V+ RG + RL L+ A++L AG++RL+
Sbjct: 134 PRGARVGTASQRRRALLRCARPDLDVVTVRGNVHARLETLDRGDVDALILGAAGLQRLEL 193
Query: 182 EKVIKE-ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IL+ ++ P+P QG + + +L+ + D + ERA L
Sbjct: 194 LDARRHAILSFDEMLPAPAQGIVGAVARGDGGALGDLLARADDRDARIAATAERAVLDVA 253
Query: 241 DGSCKSA 247
D + A
Sbjct: 254 DAASPGA 260
>gi|15617976|ref|NP_224260.1| porphobilinogen deaminase [Chlamydophila pneumoniae CWL029]
gi|15835588|ref|NP_300112.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138]
gi|16752992|ref|NP_445265.1| porphobilinogen deaminase [Chlamydophila pneumoniae AR39]
gi|33241388|ref|NP_876329.1| porphobilinogen deaminase [Chlamydophila pneumoniae TW-183]
gi|11386861|sp|Q9Z9C9|HEM3_CHLPN RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|4376307|gb|AAD18205.1| Porphobilinogen Deaminase [Chlamydophila pneumoniae CWL029]
gi|7189637|gb|AAF38528.1| porphobilinogen deaminase HemC, putative [Chlamydophila pneumoniae
AR39]
gi|8978426|dbj|BAA98263.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138]
gi|33235896|gb|AAP97986.1| hydroxymethylbilane synthase [Chlamydophila pneumoniae TW-183]
Length = 234
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 11/222 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+P RI +R S LA A E S L + P + T GDR L +
Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDREKKIPLHLVENSY 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
FT+ ++ + G D A+HSAKD+P T L + I+ L D+ V+ H + L
Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDLPETPSLPVVAITRCLHPADLL-VYADHYVH--EPL 132
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL
Sbjct: 133 PLSPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLH- 191
Query: 182 EKVIKEILNIEDFPPSPG-QGAICIETHVNNPKAQELVKVIN 222
+ +IE PP QG++ I + K ++L I+
Sbjct: 192 ---LHHAYSIELPPPYHALQGSLAITAKDHAGKWKQLFTPIH 230
>gi|226294065|gb|EEH49485.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb18]
Length = 249
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 14/189 (7%)
Query: 97 ISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
+ A +PRED RDV + +L +L SV+GTSS+RR A L R + D RG
Sbjct: 12 LGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQDIRGN 71
Query: 154 IETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHV 209
IETRL KL+ I+LA AG+ R + I L+ ++ + GQGA+ +E
Sbjct: 72 IETRLAKLDAEDGPFTCIILAAAGLLRTGQGARISHFLDSKNGKMLHAVGQGALGVEIRA 131
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA-------GFAYCKGSTLYFY 262
++ + + +++ I + ER+ L L+G C + + G + L
Sbjct: 132 DDERMRAMIEKIGDRRATFACLAERSLLRTLEGGCSAPLGVETEWVKGEGQGEVEKLRLR 191
Query: 263 GIVLASDGK 271
IV + DGK
Sbjct: 192 AIVASVDGK 200
>gi|302850188|ref|XP_002956622.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f.
nagariensis]
gi|300258149|gb|EFJ42389.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f.
nagariensis]
Length = 206
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 72/126 (57%)
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTSS RR A + + V+ RG +ETRL ++ + + A +L+ AG++RL E +
Sbjct: 6 SRVGTSSSRRAAQIRHGFPHLQVVQLRGNVETRLERIKSREISATVLSMAGLQRLGCEDM 65
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+L++++ P+ QGA+ + ++P + + I+H T+ V+ ERA L L GS
Sbjct: 66 ASAVLSMDEMLPAACQGAVGVVCREDDPWVIQQLTAISHRSTFLEVSAERACLTALLGSE 125
Query: 245 KSAIAG 250
++ AG
Sbjct: 126 EAGRAG 131
>gi|290770684|emb|CAY79080.2| Hem3p [Saccharomyces cerevisiae EC1118]
Length = 239
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 87 MPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
MPT L +G ++ R D D + +SL DL ++GTSS+RR A L R
Sbjct: 1 MPTLLPEGFELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVGTSSVRRSAQLKRKYP 60
Query: 144 DISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201
+ RG I+TRL KL++ K+ I+LA AG+ R+ E I + + + + GQG
Sbjct: 61 HLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQG 120
Query: 202 AICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
A+ IE + K +++ I + ERA + L+G C I
Sbjct: 121 ALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGGCSVPIG 168
>gi|260890849|ref|ZP_05902112.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254]
gi|260859402|gb|EEX73902.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254]
Length = 135
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K L+K+IN ++
Sbjct: 1 MLAAAGLKRVGLENRITEYFDTDSFMPAPGQGILCIQCRENDNKILNLLKIINDDEVTIM 60
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ER F DG C + I + +G+TL G+ + +IF EV GNR +
Sbjct: 61 CKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGMFNDNGTRIFKEVE--GNRENPKETA 118
Query: 290 RDAAQYIRFISNKN 303
+ A+ I+ KN
Sbjct: 119 QKLAEEIKEEEMKN 132
>gi|307254894|ref|ZP_07536716.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306862135|gb|EFM94107.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
Length = 119
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTPLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRED 105
LF +E+E L+ D AVHS KD+P +GL ++ RED
Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICERED 107
>gi|297521378|ref|ZP_06939764.1| porphobilinogen deaminase [Escherichia coli OP50]
Length = 92
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKG 94
+E+E L+ D AVHS KD+P + +G
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQG 92
>gi|289525338|emb|CBJ14814.1| porphobilinogen deaminase [Chlamydia trachomatis Sweden2]
Length = 219
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQIS 98
II +T+GD L + G FT++++ + SG+ D +HSAKD+P + I+
Sbjct: 31 IITTTTQGDLDQETPLCAVENTGFFTDDVDFLVQSGQCDLGIHSAKDLPENPKATVISIT 90
Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
A + D RD+ + H L IG+SS+RRK LL + D RG I+TRL
Sbjct: 91 ASI---DPRDILVFHEKYLSIPLPRRLRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRL 147
Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN 211
L AI++A A + RL +IL + P G+ AI H+ +
Sbjct: 148 KLLEEKNFDAIVMANAAVSRLGLRLPCTKILP-PPYHPLQGRLAITASRHIRS 199
>gi|166154510|ref|YP_001654628.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu]
gi|166155385|ref|YP_001653640.1| porphobilinogen deaminase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237802722|ref|YP_002887916.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT]
gi|237804644|ref|YP_002888798.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT]
gi|165930498|emb|CAP03991.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu]
gi|165931373|emb|CAP06945.1| porphobilinogen deaminase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231272944|emb|CAX09855.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273956|emb|CAX10748.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT]
Length = 219
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQIS 98
II +T+GD L + G FT++++ + SG+ D +HSAKD+P + I+
Sbjct: 31 IITTTTQGDLDQETPLCAVENTGFFTDDVDFLVQSGQCDLGIHSAKDLPENPKATVVSIT 90
Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
A + D RD+ + H L IG+SS+RRK LL + D RG I+TRL
Sbjct: 91 ASI---DPRDILVFHEKYLSIPLPRRLRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRL 147
Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN 211
L AI++A A + RL +IL + P G+ AI H+ +
Sbjct: 148 KLLEEKNFDAIVMANAAVSRLGLRLPCTKILP-PPYHPLQGRLAITASRHIRS 199
>gi|29840104|ref|NP_829210.1| porphobilinogen deaminase [Chlamydophila caviae GPIC]
gi|29834452|gb|AAP05088.1| porphobilinogen deaminase HemC, putative [Chlamydophila caviae
GPIC]
Length = 242
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 11/225 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P RI +R S LA A A E L P + I + T GD+ L +
Sbjct: 18 RRPLRIASRRSTLAQAQAHECVCLLRSW--FPKLWVQIHTVHTLGDKDKKTPLHLVENSQ 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++K ++ G AVHSAKD+P I A D D+ + K
Sbjct: 76 FFTDAVDKLVLRGNCHLAVHSAKDLPNP--SKTSIVAITNGLDPSDLLVYGERYLWKRFP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR +L ++D RG IE RL +L + K AI++A A + RL
Sbjct: 134 KNPRLGSSSLRRGEMLKNLFPKGQILDIRGTIEERLKQLESGKYDAIVVAKAAVIRLHLR 193
Query: 183 KVIKEILNIEDFPPS--PGQGAICIETHVNNPKAQELVKVINHED 225
+ L PP P QG + I N ++L+ +N D
Sbjct: 194 LPYTKTL-----PPPYHPLQGRLSITAAKNIEAWKKLLLPLNASD 233
>gi|149452688|ref|XP_001516450.1| PREDICTED: similar to hydroxymethylbilane synthase [Ornithorhynchus
anatinus]
Length = 218
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLR 133
+D VHS KD+PT L G I A RE D + H ++L L SV+GTSSLR
Sbjct: 90 VDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKHVGKTLATLPEKSVVGTSSLR 149
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEI 188
R A L R + RG + TRL KL+ + AI+LA AG++RL + + ++
Sbjct: 150 RAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRLGWQSRLGQV 205
>gi|41186|emb|CAA47279.1| hydroxymethylbilane synthase [Escherichia coli K-12]
Length = 89
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKL 91
+E+E L+ D AVHS KD+P +
Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEF 89
>gi|62184962|ref|YP_219747.1| porphobilinogen deaminase [Chlamydophila abortus S26/3]
gi|62148029|emb|CAH63781.1| putative porphobilinogen deaminase [Chlamydophila abortus S26/3]
Length = 249
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ K+P RI +R S LA A E L P I I +ST+GD+ + +
Sbjct: 16 LGKRPLRIASRKSILAQAQVHECVRLLRSW--FPKLWIQIHTISTRGDKDKTTPIRLVEN 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
FT+ ++K +I G AVHSAKD+P + A D D+ + +
Sbjct: 74 SQFFTDTVDKLVIRGNCHLAVHSAKDLPDP--PATPVVAITKGLDPSDLLVYAERYLWQR 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+G+SS RR L ++D RG IE RL +L N K AI++A A + RL
Sbjct: 132 FPKVPRLGSSSSRRGETLKMLFPTGRILDIRGTIEERLEQLENGKYDAIVVAKAAVLRLH 191
Query: 181 KEKVIKEILNIEDFPPS--PGQGAICI 205
+ ++L PP P QG + I
Sbjct: 192 LQLPYTKVL-----PPPYHPLQGRLAI 213
>gi|23011609|ref|ZP_00051918.1| COG0181: Porphobilinogen deaminase [Magnetospirillum
magnetotacticum MS-1]
Length = 119
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%)
Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+E+ P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA
Sbjct: 1 MEEMLPAVAQGALGIECRARDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAA 60
Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
A +G L G++ DG V R G DA IGRDA ++ + F
Sbjct: 61 LARIQGDRLSLDGLLFLPDGSRHWAVHREGATSDAAEIGRDAGAELKRAAGDVYF 115
>gi|238488537|ref|XP_002375506.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357]
gi|220697894|gb|EED54234.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357]
Length = 230
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 13/189 (6%)
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
MPT L +++A PR+D RD I L SL A+L R +
Sbjct: 1 MPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSL--------KSLPEGAVLRRLYPHLR 52
Query: 147 VIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGA 202
+ RG +ETRL K++N+ + ++++ AG++R+ E I + L +D + GQGA
Sbjct: 53 FANLRGNVETRLAKVDNSDSEYTCMVMSAAGLERVGLEHRISQYLGSKDGGILHAVGQGA 112
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA-GFAYCKGSTLYF 261
+ +E + K QEL+ + + + + ER+ + L+G C + I + L
Sbjct: 113 LGLEIRKGDRKMQELLGQLADQRSTLACLAERSLMRTLEGGCSAPIGVETEWISAGALSI 172
Query: 262 YGIVLASDG 270
+ IV++ DG
Sbjct: 173 HAIVVSLDG 181
>gi|149041456|gb|EDL95297.1| hydroxymethylbilane synthase, isoform CRA_c [Rattus norvegicus]
Length = 208
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT
Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113
+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFH 126
>gi|149041455|gb|EDL95296.1| hydroxymethylbilane synthase, isoform CRA_b [Rattus norvegicus]
Length = 192
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT+
Sbjct: 6 RVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFTK 63
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113
E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 64 ELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFH 110
>gi|329945529|ref|ZP_08293267.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528774|gb|EGF55723.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 149
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH---------NIVIIPLSTKGDRITNRTLT 56
R+GTR S LAL + + +L ++V + GDR L
Sbjct: 13 LRLGTRGSRLALTQSGQVADALRQAAAAGARAPGCDNLELDLVTVRTDGDGDRTP---LR 69
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED D +
Sbjct: 70 QLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPHDALCARDGL 129
Query: 117 SLKDLALHSVIGTSSLRRKA 136
+L L + +GT S RR A
Sbjct: 130 TLATLPDGARVGTGSPRRAA 149
>gi|154762311|gb|ABS86004.1| porphobilinogen deaminase [Cervus elaphus]
gi|155494266|gb|ABS86002.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494267|gb|ABS86003.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494268|gb|ABS86005.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494269|gb|ABS86006.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494270|gb|ABS86007.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494271|gb|ABS86008.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494272|gb|ABS86009.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494273|gb|ABS86010.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494274|gb|ABS86011.2| porphobilinogen deaminase [Cervus elaphus canadensis]
Length = 195
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E
Sbjct: 1 RGNLNTRLQKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
+ +LV V++ +T ER+FL L+G C +A K LY G V + +
Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTTIKDGQLYLTGGVWSLN 120
Query: 270 G 270
G
Sbjct: 121 G 121
>gi|729693|sp|P40129|HEM3_ERWCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|41671|emb|CAA44890.1| hemC [Erwinia chrysanthemi]
Length = 89
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++P+ T+G + + L ++GGKGLF
Sbjct: 6 LRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGXLLLDTPLAKVGGKGLFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKL 91
+E+E L+ D AVHS KD+P +
Sbjct: 64 KELELALLENRADIAVHSMKDVPVEF 89
>gi|154762327|gb|ABS86012.1| porphobilinogen deaminase [Capra hircus]
gi|154762329|gb|ABS86013.1| porphobilinogen deaminase [Capra hircus]
Length = 195
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E
Sbjct: 1 RGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
+ +LV V++ +T ER+FL L+G C +A K LY G V + +
Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLN 120
Query: 270 G 270
G
Sbjct: 121 G 121
>gi|294885317|ref|XP_002771270.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239874766|gb|EER03086.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 556
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 37/240 (15%)
Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106
GD L ++ G+FT + L++G D VHS KD+P G + A LPR D
Sbjct: 48 GDTNLKDPLWKMPETGVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTTVVATLPRADP 107
Query: 107 RDVFI--SHTAQSLKDLALHSVIGTSSLRRKALLLRWR-------SDISVIDFRGKIETR 157
RD+ + + + ++ +SS RR+ L + + + D RG I+TR
Sbjct: 108 RDLLLIRRDAIEEMTSEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQFRDVRGNIQTR 167
Query: 158 LNKLNNN---------KAHAILLAYAGIKRLKK-------------EKVIKE----ILNI 191
+ KL + + H +++A A + R + + I E +L +
Sbjct: 168 MKKLMDPTIHDESLGCRPHGLVVAKAAVDRFIRSTREEFKESRQLVQGYISECRCMVLPL 227
Query: 192 EDFPPSPGQGAICIETHVNNPK--AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
P + QGA+ IE K +++V+ +N T+D+ + E+ L G C I
Sbjct: 228 SANPTAAAQGALGIEVSTAPEKEHVRKIVRSLNDRSTFDAASKEKELLNSYGGGCHQKIG 287
>gi|255029220|ref|ZP_05301171.1| porphobilinogen deaminase [Listeria monocytogenes LO28]
Length = 128
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 189 LNIEDFPP-----SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L +ED PP + GQGA+ IE ++ + ++++ I+HE+T V ER FL +L+G
Sbjct: 3 LKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGG 62
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
C+ IAGFA + F G+V +DG I E + G
Sbjct: 63 CEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG 99
>gi|322694171|gb|EFY86008.1| porphobilinogen deaminase Hem3, putative [Metarhizium acridum CQMa
102]
Length = 654
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 30/241 (12%)
Query: 69 EKKLISGE--IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLAL 123
E+KL SG+ + C V S D+P R+D RD + SL+ L
Sbjct: 98 EEKLTSGQWTLSCVV-SKTDIPL-------------RDDPRDALVVKAGLAYTSLQTLPP 143
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKK 181
+V+GTSS+R A L R + + RG ++TRL K+ + ++ ++++ AG++R+
Sbjct: 144 GAVVGTSSVRHSAQLRRLYPHLRFSNLRGNVDTRLAKVEDPESEYTCMIMSAAGLERVGL 203
Query: 182 EKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + L +D + GQGA+ +E + K + V + + + ERA L
Sbjct: 204 KSRISQYLGSKDGGILHAVGQGALGLEIRKGDSKTLQFVNQLGDRKSTLASLAERALLRA 263
Query: 240 LDGSCKSAIA----GFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDA 292
L+G C I + L IV++ DG E S + A +GRD
Sbjct: 264 LEGGCSVPIGVETEWIGQSEHQVLRMKAIVVSLDGTECVERSIDAMLLTNDQASQLGRDL 323
Query: 293 A 293
A
Sbjct: 324 A 324
>gi|225020272|ref|ZP_03709464.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii
ATCC 33806]
gi|224947016|gb|EEG28225.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii
ATCC 33806]
Length = 152
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+ K+++ + A++LAYAG+ R+ + E+ + +F P+P QGA+ +E ++
Sbjct: 1 MAKVHDGELDAVVLAYAGLSRVHRADEATEVFDPLEFLPAPAQGALAVECRADDADTIAA 60
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEV 276
+ I + + ER LA L+ C + +A +A + + + V+A DG
Sbjct: 61 ITTIADSKAYACAHTERVVLARLEAGCTAPVAAYATVAADNIMTLHAAVIAMDGSATLRA 120
Query: 277 SRNGNRCDAINIGRDAAQYI 296
+ G A N+G A+ +
Sbjct: 121 TAAGPIDTAENLGMTVARAL 140
>gi|306835115|ref|ZP_07468155.1| possible hydroxymethylbilane synthase [Corynebacterium accolens
ATCC 49726]
gi|304568972|gb|EFM44497.1| possible hydroxymethylbilane synthase [Corynebacterium accolens
ATCC 49726]
Length = 158
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG I+TR++K+ + + A++LAYAG+ R E +I + E F P+P QGA+ IE
Sbjct: 2 LRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRASDIFDPELFMPAPAQGALAIEAVA 61
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
+A + + E + ERA LA L+ C + +A + G L G V A D
Sbjct: 62 GT-EAAAALDAVVDEQATAAALAERAVLARLEAGCTAPVAATSRWNGDQLTVRGGVFALD 120
Query: 270 GKIFHEVSRNGNRCDAINIG 289
G + +G +A +G
Sbjct: 121 GSRQLTATASGTAAEAAELG 140
>gi|77799154|gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor]
Length = 98
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFH 274
E + +NHEDT +V CER FLA LDG+C++ IA +AY K F G++ + DG
Sbjct: 2 EYLSSLNHEDTRLAVACEREFLAVLDGNCRTPIAAYAYRDKDGNCSFRGLLASPDGSKVF 61
Query: 275 EVSRNGNRC--DAINIGRDAAQYIRFISNKNVFN 306
E +R+G D + +G+DA ++ + F+
Sbjct: 62 ETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFD 95
>gi|323338379|gb|EGA79604.1| Hem3p [Saccharomyces cerevisiae Vin13]
Length = 152
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEK 183
++GTSS+RR A L R + RG I+TRL KL++ K+ I+LA AG+ R+ E
Sbjct: 8 IVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLEN 67
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + + + GQGA+ IE + K +++ I + ERA + L+G
Sbjct: 68 RITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGG 127
Query: 244 CKSAIA 249
C I
Sbjct: 128 CSVPIG 133
>gi|317471677|ref|ZP_07931019.1| porphobilinogen deaminase domain-containing protein [Anaerostipes
sp. 3_2_56FAA]
gi|316900848|gb|EFV22820.1| porphobilinogen deaminase domain-containing protein [Anaerostipes
sp. 3_2_56FAA]
Length = 133
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
A+++A AG+KR ++ I ++E+ P+ GQG +C++ V Q L I+ +T
Sbjct: 5 ALIMAAAGLKRAGLKERISRYFSVEEMLPAAGQGTLCVQ--VRKDFDQSLFFCIHDRETE 62
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
ER F+ LDG C S IA +A G+ L G+ + ++S NG DA
Sbjct: 63 LVTEAERGFVRALDGGCSSPIAAYAEITGNDLCLTGLYYNAADNTGRKMSINGKAQDAGE 122
Query: 288 IGRDAAQYIR 297
+G A+ I+
Sbjct: 123 LGCRLAEQIQ 132
>gi|326772618|ref|ZP_08231902.1| hydroxymethylbilane synthase [Actinomyces viscosus C505]
gi|326637250|gb|EGE38152.1| hydroxymethylbilane synthase [Actinomyces viscosus C505]
Length = 140
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 37 NIVIIPLSTKGDRITNRT-LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95
I ++ + T GD +RT L ++GG G+F + L+ GE+D VHS KD+PT+ ++GL
Sbjct: 55 GIDLVTVRTDGD--GDRTPLRQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGL 112
Query: 96 QISAYLPREDIRDVFISHTAQSLKDL 121
++ PRED RD + + +L DL
Sbjct: 113 EVICVPPREDPRDALCARDSLTLADL 138
>gi|295670329|ref|XP_002795712.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01]
gi|226284797|gb|EEH40363.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01]
Length = 216
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174
+L +L SV+GTSS+RR A L R + D RG IETRL KL+ I+LA A
Sbjct: 2 TLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAA 61
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+ R + I L+ ++ + GQGA+ +E ++ + + +++ I +
Sbjct: 62 GLLRSGQGARISHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLA 121
Query: 233 ERAFLAELDGSCKSAIA-GFAYCKGS------TLYFYGIVLASDGK 271
ER+ L L+G C + + + KG L IV + DGK
Sbjct: 122 ERSLLRALEGGCSAPLGVETEWVKGEGEGEVDKLRLRAIVASVDGK 167
>gi|293194048|ref|ZP_06609930.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309]
gi|292819802|gb|EFF78811.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309]
Length = 166
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKV 220
+ A++LA AG++R+ + ++L+ P+P QGA+ IET ++P L+
Sbjct: 2 TGERLDAVVLALAGLRRIGLDAHATDVLHPAIMMPAPSQGALAIETRDEDDPLLHALLGT 61
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGK 271
+NH T + + ERA L+ L C + + FA S L V++ DG+
Sbjct: 62 LNHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGR 114
>gi|255030292|ref|ZP_05302243.1| porphobilinogen deaminase [Listeria monocytogenes LO28]
Length = 84
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDM 87
LF E+E+ L ID AVHS KD+
Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDV 84
>gi|330444348|ref|YP_004377334.1| Porphobilinogen deaminase, dipyromethane cofactor binding
domain-containing protein [Chlamydophila pecorum E58]
gi|328807458|gb|AEB41631.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila pecorum E58]
Length = 237
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +I +R S LA A E L + P ++I T+GDR L I F
Sbjct: 19 PLKIASRDSNLAKAQVNECLQLLRTSY--PKLQSLLITTKTQGDRDKLTPLHTIENSDFF 76
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
T +++ + G A+HSAKD+PT L + ++ L D+ V+ H + +
Sbjct: 77 TRDVDALVCQGSCHIAIHSAKDLPTPSPLPLVALTRCLHPADLL-VYADHYTK--EPFPS 133
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +G+SS+RR +L + +++ RG IE RL +L+NN A++LA A RL
Sbjct: 134 NPRLGSSSMRRGEVLKQLFPLGQILNIRGTIEERLQQLHNNTYDAVVLAKAAALRLGLSF 193
Query: 184 VIKEILNIEDFPPS--PGQGAICIETH 208
+ E+L PP P QG + + +
Sbjct: 194 LYSELL-----PPPYHPLQGRLALTAY 215
>gi|169837036|ref|ZP_02870224.1| Porphobilinogen deaminase [candidate division TM7 single-cell
isolate TM7a]
Length = 119
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E + + F P+PGQG +CI+ N+ K + L+++IN ++ ER F DG C
Sbjct: 1 MSEYFDTDFFMPAPGQGILCIQCRENDNKIRHLLEIINDDEVTMMCEAEREFSKIFDGGC 60
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ I + +G TL G+ + ++ EV GN+ + I + A+ I+
Sbjct: 61 HTPIGCSSVIEGDTLKLKGMFNDNGSRMLKEVE--GNKENPKEIAQKLAEEIK 111
>gi|327493887|gb|AEA86530.1| porphobilinogen deaminase [Euglena gracilis]
Length = 210
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 149 DFRGKIETRLNKLNN--NKAHAILLAYAGIKRLKKEKVIKEILNIED---FPPSPGQGAI 203
D RG ++TRL KL + + A++LA +G++RL + E+L D F + GQGA+
Sbjct: 10 DVRGNVQTRLAKLEDPTHGYAALVLAVSGLERLALGHHVTEVLASTDRRWFGYAVGQGAL 69
Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
++ + ++ ++H++T ERA + EL+G C + IA
Sbjct: 70 TVQCREGDAGTLRYLQHLHHQETAQRCIAERALMRELEGGCHAPIA 115
>gi|70931402|ref|XP_737390.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56512740|emb|CAH87819.1| hypothetical protein PC000109.00.0 [Plasmodium chabaudi chabaudi]
Length = 169
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
LN P+ QG I + ++ NNP+ +++K IN E + N ER FL ++DGSC I
Sbjct: 41 LNTNVMCPALCQGIIAVTSNKNNPEISQILKNINDEKSQIMANIERTFLHKIDGSCTMPI 100
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNGNRCDAINIGRDAAQYIR 297
G+ + + F I+ +G H +V R+ N D I +AA+ I+
Sbjct: 101 GGYTKFSKNKIIFNAIINDINGLESHKIKVVRHLNNLDG--IADEAAEKIK 149
>gi|294896302|ref|XP_002775489.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239881712|gb|EER07305.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 539
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 59/258 (22%)
Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106
GD L ++ G+FT + L++G D VHS KD+P G + A LPR D
Sbjct: 17 GDTNLKDPLWKMPETGVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTTVVATLPRADP 76
Query: 107 RDVFI-------SHTAQSLKDLALHS---------------VIGTSSLRRKALLLRWRSD 144
RD+ + T++ K + L S V G +S++ + + R +
Sbjct: 77 RDLLLIRRDAIEEMTSEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQFRDV----RGN 132
Query: 145 ISV-----IDFRGKIETRLNKLNNN---------KAHAILLAYAGIKRL--KKEKVIKE- 187
I V + G ++TR+ KL + + H +++A A + R + KE
Sbjct: 133 IQVQPMGSSPYEGLLQTRMRKLMDPTIHDESLGCRPHGLVVAKAAVDRFIRSTREEFKES 192
Query: 188 --------------ILNIEDFPPSPGQGAICIETHVNNPK--AQELVKVINHEDTWDSVN 231
+L + P + QGA+ IE K +++V+ +N T+D+ +
Sbjct: 193 RQLVQGYISDCRCMVLPLSANPTAAAQGALGIEVSTAPEKEHVRKIVRSLNDRSTFDAAS 252
Query: 232 CERAFLAELDGSCKSAIA 249
E+ L G C I
Sbjct: 253 KEKELLNSYGGGCHQKIG 270
>gi|329944047|ref|ZP_08292313.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328531093|gb|EGF57944.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 206
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED-- 225
A++LA +G++RL E E+L++E P+P QGA+ +E A +D
Sbjct: 34 AVVLALSGLRRLGLEHCASEVLDLETMLPAPAQGALAVEARAGEGSAALARAAAALDDEP 93
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDG 270
T +V ERA +A L C + + +A+ G L +V + DG
Sbjct: 94 TRLAVTAERALMARLGAGCAAPVGAWAHLSGGEQEQRVLALRAVVTSLDG 143
>gi|238488539|ref|XP_002375507.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357]
gi|220697895|gb|EED54235.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357]
Length = 90
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R+ L + P + I L T GDR L G K
Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRNCLQKI--APGRSFEIEALRTLGDRDQLTALYNFGAKS 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAK 85
L+T E+E+KL +GE+D VH K
Sbjct: 66 LWTTELEEKLNAGELDVIVHCLK 88
>gi|221488268|gb|EEE26482.1| porphobilinogen deaminase, putative [Toxoplasma gondii GT1]
Length = 174
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L + F P+ QG I ++ + L++ +N + CERAFL LDGSC++
Sbjct: 35 LLPADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAFLRALDGSCRTP 94
Query: 248 IAGFAYCKGST-LYFYGIVLASDGKIFHEVSRN--GNRC--DAINIGRDAAQYIR 297
IAG A + T L F G++ DGK R G R +A +GR A+ I+
Sbjct: 95 IAGIAEWRAKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIK 149
>gi|306835113|ref|ZP_07468154.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726]
gi|304569028|gb|EFM44552.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726]
Length = 89
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA A R L+D +IV +T GD TN E G G+FT
Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDAGFDSELHIV----TTAGD--TNMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPT 89
+ + + L GE D AVHS KD+PT
Sbjct: 56 QALREALCRGECDIAVHSFKDLPT 79
>gi|167038282|ref|YP_001665860.1| porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|166857116|gb|ABY95524.1| Porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC
33223]
Length = 168
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202
SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+P QG
Sbjct: 9 SDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLESIITEYFPPDVVVPAPCQGI 68
Query: 203 ICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
+ +E + + QE I T+ + ER L +C+ +A
Sbjct: 69 LAVEIAESFDNIFQEFYSYIVDRRTFFEASVERELLKAFGVNCRQPFGAYA 119
>gi|62467569|gb|AAX83934.1| Hem3p [Saccharomyces cerevisiae]
Length = 97
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + K P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGL 95
K L+T+E+E L S ++D VHS KDMPT L +G
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGF 97
>gi|256751190|ref|ZP_05492071.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749915|gb|EEU62938.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1]
Length = 161
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202
SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+P QG
Sbjct: 2 SDIQIVPVRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLENIITEYFPPDVVVPAPCQGI 61
Query: 203 ICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
+ +E + + QE I T+ + ER L +C+ +A
Sbjct: 62 LAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFGVNCRQPFGAYA 112
>gi|73760286|dbj|BAE20060.1| hydroxymethylbilane synthase [Capra hircus]
Length = 109
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLA 172
++L+ L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA
Sbjct: 28 VGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILA 87
Query: 173 YAGIKRLKKEKVIKEILNIED 193
AG++R+ + + +IL+ E+
Sbjct: 88 AAGLQRMGWQNRVGQILHPEE 108
>gi|167946284|ref|ZP_02533358.1| porphobilinogen deaminase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 51
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97
+ GGKGLF +E+E+ ++ G D AVHS KD+P +L +GL +
Sbjct: 1 MRRFGGKGLFVKELEQAMLEGRADIAVHSMKDVPAELPEGLHL 43
>gi|467060|gb|AAA17244.1| hem3a [Mycobacterium leprae]
Length = 134
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C + + A
Sbjct: 5 PAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCSAPVGAIAQVV 64
Query: 256 GSTLYFYGIVLASDGKIFHEVSRNG 280
S + +G++F E+S G
Sbjct: 65 ES--------IDGEGRVFEELSLRG 81
>gi|146332076|gb|ABQ22544.1| porphobilinogen deaminase-like protein [Callithrix jacchus]
Length = 163
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL L+G C
Sbjct: 4 VGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRHLEGGC 63
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
+A K LY G V + DG
Sbjct: 64 SVPVAVHTAMKDGQLYLTGGVWSLDG 89
>gi|307826363|ref|ZP_07656567.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732604|gb|EFO03477.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 337
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +
Sbjct: 2 VNTRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIALLV 61
Query: 214 AQELVKVINHEDTW 227
A I +W
Sbjct: 62 AGAGAFYIADYASW 75
>gi|332187060|ref|ZP_08388801.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas
sp. S17]
gi|332013070|gb|EGI55134.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas
sp. S17]
Length = 107
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264
IET ++ A L+ I+H +T V ER+ LA L C S +A A G L
Sbjct: 3 IETRADDAAATMLIGSIDHAETHACVMAERSLLAALQADCHSPVAALASLSGEMLTLRAE 62
Query: 265 VLASDGK 271
+LA DG
Sbjct: 63 LLAEDGS 69
>gi|51241768|dbj|BAD36778.1| porphobilinogen deaminase [Homo sapiens]
Length = 157
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+G C
Sbjct: 1 ILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVP 60
Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270
+A K LY G V + DG
Sbjct: 61 VAVHTAMKDGQLYLTGGVWSLDG 83
>gi|167949214|ref|ZP_02536288.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 136
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+KRL E+ I + E P+ GQGAI IE ++ + L+ ++H DT V+ E
Sbjct: 8 AGLKRLGFEQRITAFIAPEQSLPAIGQGAIGIECRSDDAQVNALIAPLHHVDTAACVHAE 67
Query: 234 RAFLAELDGS-----CKSAIAGFAYCKGSTLYF 261
RA L G C+ AG G +++
Sbjct: 68 RAMNNRLMGGSPCADCRLRDAGVPATSGCVVWW 100
>gi|330937205|gb|EGH41226.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 119
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
GQGA+ IE + + L+ ++HEDT V ER+ L+G C+ IA +A +G
Sbjct: 3 GQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGCQVPIACYAVLEGDD 62
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
++ G+V G + + A +G A+ +
Sbjct: 63 VWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEAL 100
>gi|18140915|gb|AAL60466.1|AF411692_1 antithrombin [Chelydra serpentina]
Length = 453
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 33 IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLL 92
IP ++ ++ L KGD IT + G L +E+E+ L ++ + S K+
Sbjct: 284 IPSDHVQVVELPYKGDDITMVLILPTMGTSL--KEVEQDLTLEQLQSWLGSMKE------ 335
Query: 93 KGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRG 152
+ +S YLPR I D F T + L+D+ L + S + + R+D+ V D
Sbjct: 336 --ISLSIYLPRFRIEDNF--STKKKLRDMGLVDLFSPESAKLPGIAAEGRTDLYVSDAFH 391
Query: 153 KIETRLNKLNNNKAHAILLAYAG 175
K +N+ + A + ++ +G
Sbjct: 392 KAFLEVNEEGSEAAASTVVMISG 414
>gi|3668361|gb|AAC61857.1| porphobilinogen deaminase [Prosthecochloris vibrioformis]
Length = 43
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78
NI + + T GD + + L++IG GLFT++IEK L++GEID
Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEID 43
>gi|294637951|ref|ZP_06716219.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685]
gi|291088912|gb|EFE21473.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685]
Length = 94
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 34/73 (46%)
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
+NHE T V+ ERA L+G C+ I +A G L+ +V DG + R G
Sbjct: 2 LNHESTALRVSAERAMNMRLEGGCQVPIGSYAEIDGDQLWLRALVGRPDGSLIIRGERRG 61
Query: 281 NRCDAINIGRDAA 293
A ++G D A
Sbjct: 62 PLHQAESMGIDLA 74
>gi|54310581|ref|YP_131601.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9]
gi|46915024|emb|CAG21799.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9]
Length = 104
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
+++ + + L+ +NH +T + CERA L G C+ I ++ +G ++ +V
Sbjct: 1 MDDQRVRALLAPLNHHETATRIFCERAMNNRLQGGCQVPIGSYSELQGDQIWLRALVGEP 60
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
DG G D +G A+ + K + +
Sbjct: 61 DGSKMVRGEITGPAIDGEALGTQLAEQLLADGAKEILD 98
>gi|313896589|ref|ZP_07830138.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312974774|gb|EFR40240.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 120
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YC 254
P+ GQGA+ IE ++ + + + D + ERAFL ++G C+ + +A
Sbjct: 3 PAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRVEGGCQIPVGVYAEIG 62
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G LY ++ + DG +G A IG A+ + + + +
Sbjct: 63 DGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDMGGREIL 113
>gi|291080775|ref|ZP_06535168.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 47
Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
P + ++P+ T+GD I + L ++GGKGLF +E+E L
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIAL 43
>gi|281415815|ref|ZP_06247557.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
Length = 71
Score = 39.3 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 5 PFRIGTRCSPLA------LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
P RIGTR S LA +A A RS L H +V+I T+GD +T +L +
Sbjct: 3 PLRIGTRGSALATTQTSHVAEALTARSGL-------AHELVVI--RTEGD-VTTGSLASL 52
Query: 59 GGKGLFTEEIEKKLISGEI 77
GG G+F + ++ G +
Sbjct: 53 GGTGVFASALRAAVLDGVV 71
>gi|113707391|gb|ABI36594.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 87
Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
GA+ +E + +LV V++ +T ERAFL L+G C +A K LY
Sbjct: 1 GALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLY 60
Query: 261 FYGIVLASDG 270
G V + DG
Sbjct: 61 LTGGVWSLDG 70
>gi|58698960|ref|ZP_00373817.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534526|gb|EAL58668.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 62
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
+IGTR S LA+ A E + L+D P +I I+ + + GD+ N L E
Sbjct: 14 KIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKSSGDKYANANLAE 62
>gi|266622117|ref|ZP_06115052.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM
13479]
gi|288866173|gb|EFC98471.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM
13479]
Length = 121
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251
E F P+ GQG + +E + + + E+ I ED + ER L LD C + +
Sbjct: 19 EAFIPAGGQGILAVEGRIED-RICEMAVRIQDEDAKTCLMLERKILKLLDAGCHEPVGVY 77
Query: 252 AYCKGSTLYFYGI 264
+ +G + +GI
Sbjct: 78 SRIRGEEIEVFGI 90
>gi|238917296|ref|YP_002930813.1| hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750]
gi|238872656|gb|ACR72366.1| Hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750]
Length = 287
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 52 NRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDM------PTKLLKGLQISAYLPRED 105
N EIGG ++ + LI ID + + + +L G+ IS + R D
Sbjct: 37 NLDTVEIGGSDIYPAL--EALIDDNIDMVLVDMRMLVEMEKSGQQLDDGIVISGVIKRRD 94
Query: 106 IRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK 165
R V I + KD+ ++V+ T S A++ ++ + I+ ++KL++ +
Sbjct: 95 PRYVMIRR--RGTKDVVENAVVVTDSDENAAVICEMYDNVECV-VENNIKDCMSKLDSEE 151
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFP---PSPGQGAICIETH 208
A+ Y I+ + +K + DF P GQG CI T+
Sbjct: 152 CDAVFAFYDDIRIARLYNGLKYKYTLMDFSDCVPPHGQGIYCILTN 197
>gi|77176670|gb|ABA64453.1| hydroxymethylbilane synthase [Sus scrofa]
Length = 33
Score = 37.0 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95
LFT+E+E L E+D VHS KD+PT L G
Sbjct: 1 LFTKELEHALERNEVDLVVHSLKDLPTVLPPGF 33
>gi|237738437|ref|ZP_04568918.1| alanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
gi|229420317|gb|EEO35364.1| alanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
Length = 371
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 36/146 (24%)
Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF--------- 150
Y+ +EDI HTAQ + S I + + + R + + +D
Sbjct: 70 YIRQEDIA---CQHTAQHM-----FSAIAYNDYKLNTVGFRMAEEYTTVDLDSNEITEEV 121
Query: 151 ------------RGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198
+ I+ ++ +NN +A I G+++ KEKV+ ++ +E P
Sbjct: 122 IEELERKANEVIKKAIQLKIFIMNNEEARKI----EGLRKAIKEKVVGDVRFVE--IPGV 175
Query: 199 GQGAICIETHVNNPKAQELVKVINHE 224
GA C HV N K +L K+INHE
Sbjct: 176 DLGA-CAGFHVENTKDIQLFKIINHE 200
>gi|186475304|ref|YP_001856774.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
phymatum STM815]
gi|226724267|sp|B2JDV2|KDSB_BURP8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|184191763|gb|ACC69728.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
phymatum STM815]
Length = 267
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 20/124 (16%)
Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88
D PP I ++P R+ N+ L +IGGK + E+ + SG
Sbjct: 3 DTQHTPPF-IAVVPARLASTRLPNKPLADIGGKPMVVRVAERAVESG------------- 48
Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
Q+ + + DV +H ++ A H GT L A WR D+ V+
Sbjct: 49 -----AQQVLIATDAQAVFDVARAHGIDAMMTRADHPS-GTDRLAEVAAHYGWRDDMIVV 102
Query: 149 DFRG 152
+ +G
Sbjct: 103 NVQG 106
>gi|14141700|gb|AAK54358.1|AF213017_10 CinH resolvase [Acinetobacter calcoaceticus]
gi|24411191|emb|CAC80898.1| CinH resolvase [Acinetobacter sp. ED23-35]
gi|30172185|emb|CAD31052.1| site-specific CinH resolvase [Acinetobacter sp. ED45-25]
gi|30502914|emb|CAD31737.1| site-specific resolvase CinH [Acinetobacter sp. LS56-7]
Length = 188
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQ--ISAYLPREDIRDVFISHTAQS--LKDLALHSV 126
++I +D S KD+ T++ K ++ I+ +E+I + TAQS + +L L +
Sbjct: 57 RVIVHSMDRFARSLKDLVTEVDKLVKRGIAIQFVKENI-----TFTAQSTPMDNLMLQLM 111
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
+ R+ +L R + I + +GK + R++KLN ++A A+L A+
Sbjct: 112 GAFAQFEREIILERQKEGIKIAAAQGKYKGRVHKLNPDQAKALLQAW 158
>gi|312886729|ref|ZP_07746336.1| acriflavin resistance protein [Mucilaginibacter paludis DSM 18603]
gi|311300831|gb|EFQ77893.1| acriflavin resistance protein [Mucilaginibacter paludis DSM 18603]
Length = 440
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 17/132 (12%)
Query: 26 SLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK---GLFTEEIEKKLISGEI----- 77
SL DV IP I +P+ +I + ++GG G+F + E + + G +
Sbjct: 253 SLTDVENIPVGVINTVPV-----KIKDVATVQMGGDERLGIFDQNGEGEAVGGIVVMRYG 307
Query: 78 ---DCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
D +H+ KD + KGL R I + +S+K + +I T S+
Sbjct: 308 ENADKVIHAVKDKMNDIQKGLPAGVSFKIAYDRSELIENAVKSVKHTLIEEMI-TVSIIV 366
Query: 135 KALLLRWRSDIS 146
L WRS +S
Sbjct: 367 ILFLFSWRSALS 378
>gi|94468604|gb|ABF18151.1| hydroxymethylbilane synthase-like protein [Aedes aegypti]
Length = 349
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL L
Sbjct: 4 EKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSFLKTLG 63
Query: 242 GSCKSAIAGFAY------CKGSTLYFYGIVLASDGK 271
G C + +A K + L G V + DGK
Sbjct: 64 GGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGK 99
Searching..................................................done
Results from round 2
>gi|90414241|ref|ZP_01222221.1| porphobilinogen deaminase [Photobacterium profundum 3TCK]
gi|90324688|gb|EAS41229.1| porphobilinogen deaminase [Photobacterium profundum 3TCK]
Length = 341
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PGLVVELVPMVTKGDIILDTPLAKVGG 89
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ +
Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ + + L+ +NH +T + CERA L
Sbjct: 210 MHDRIRSAIEPEESLPAVGQGAVGIECRLDDHRVRALLATLNHPETATRIFCERAMNNHL 269
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I ++ +G ++ +V DG G D +G A+ +
Sbjct: 270 QGGCQVPIGSYSELQGDQIWLRALVGEPDGSKMVRGEITGAAIDGEALGTQLAEQLLADG 329
Query: 301 NKNVFN 306
K + +
Sbjct: 330 AKEILD 335
>gi|209693832|ref|YP_002261760.1| porphobilinogen deaminase [Aliivibrio salmonicida LFI1238]
gi|226706282|sp|B6EPK1|HEM3_ALISL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|208007783|emb|CAQ77905.1| porphobilinogen deaminase HemC [Aliivibrio salmonicida LFI1238]
Length = 311
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 168/307 (54%), Gaps = 3/307 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L +IG
Sbjct: 1 MSQQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P + +GL + R D RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + +GT SLRR+ L +R D+ + + RG + TRL KL++ AI+LA AG+ RL
Sbjct: 119 ELPQGATVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E IK + E P+ GQGA+ IET +N+ + + L+ +NH +T V CERA
Sbjct: 179 GLEDRIKSSIEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNHPETAHRVLCERAMNNR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG I G DA +G A+ +
Sbjct: 239 LEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSIMVRGETTGPVSDAEELGTKLAEQLLND 298
Query: 300 SNKNVFN 306
K++ +
Sbjct: 299 GAKDILD 305
>gi|330444901|ref|ZP_08308556.1| porphobilinogen deaminase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489211|dbj|GAA03053.1| porphobilinogen deaminase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 310
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MTSQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ V D RG + TRL KL++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQIRAQRPDLIVNDLRGNVNTRLRKLDDGEYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + E P+ GQGA+ IE +++ + ++L+ +NH+ T V CERA L
Sbjct: 179 MDDRIRSEIAPETSLPAVGQGAVGIECRLDDTRVRQLLDALNHQPTATRVLCERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G A +G A +
Sbjct: 239 QGGCQVPIGSYALLEGDEIWLRALVGEPDGSKIVRAEIRGPIAQAEQLGTTLADQLLADG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKDILD 304
>gi|21957067|gb|AAM83970.1|AE013638_8 porphobilinogen deaminase; hydroxymethylbilane synthase [Yersinia
pestis KIM 10]
gi|45437816|gb|AAS63365.1| porphobilinogen deaminase [Yersinia pestis biovar Microtus str.
91001]
Length = 369
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 57 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 114
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 115 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 174
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 175 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 234
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 235 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 294
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A +
Sbjct: 295 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 354
Query: 301 NKNVF 305
+ +
Sbjct: 355 AREIL 359
>gi|261210172|ref|ZP_05924469.1| porphobilinogen deaminase [Vibrio sp. RC341]
gi|260840712|gb|EEX67261.1| porphobilinogen deaminase [Vibrio sp. RC341]
Length = 311
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKSARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLEQG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|109896672|ref|YP_659927.1| porphobilinogen deaminase [Pseudoalteromonas atlantica T6c]
gi|123065108|sp|Q15Z15|HEM3_PSEA6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|109698953|gb|ABG38873.1| hydroxymethylbilane synthase [Pseudoalteromonas atlantica T6c]
Length = 309
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 176/306 (57%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG
Sbjct: 1 MSDRVIRIATRKSALAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T S+++
Sbjct: 59 KGLFIKELEVAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+++ D RG + TRL KL++ + AI+LA AG+ RL+
Sbjct: 119 LPQGAIVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDDGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L
Sbjct: 179 MQDRIKTYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAERAMNAKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G LY G+V + DG + + + GN DA++IG D A+ +
Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVDVAEQLLEKG 298
Query: 301 NKNVFN 306
++
Sbjct: 299 AGDILQ 304
>gi|294142612|ref|YP_003558590.1| porphobilinogen deaminase [Shewanella violacea DSS12]
gi|293329081|dbj|BAJ03812.1| porphobilinogen deaminase [Shewanella violacea DSS12]
Length = 309
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+ +S+ D
Sbjct: 59 KGLFVKELEIAMLDGRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPKGAVVGTSSLRRQCQIRAMRPDLKITDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERISSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHTETRYRVTAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I FA +G TL G+V DG + G + DA IG A+ +
Sbjct: 239 QGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTSVGPKTDAKAIGITLAKELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|90581042|ref|ZP_01236842.1| porphobilinogen deaminase [Vibrio angustum S14]
gi|90437738|gb|EAS62929.1| porphobilinogen deaminase [Vibrio angustum S14]
Length = 310
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSNQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIIVELVPMITKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L
Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLAALSDQATTTRVLCERAMNNYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G A +G A+ +
Sbjct: 239 QGGCQVPIGSYAELEGDQIWLRALVGEPDGSKIVRAEIRGPIEQAEQLGETLAEQLLNDG 298
Query: 301 NKNVFN 306
+++ +
Sbjct: 299 ARDILD 304
>gi|148978777|ref|ZP_01815157.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3]
gi|145962198|gb|EDK27482.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3]
Length = 326
Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 172/301 (57%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 20 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 78 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQG 137
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+
Sbjct: 138 AVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 197
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C
Sbjct: 198 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLEGGC 257
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I ++ G ++ +V DG +G R DA +G A + + +
Sbjct: 258 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGPRKDAEALGVTLANQLLDDGAREI 317
Query: 305 F 305
Sbjct: 318 L 318
>gi|149191476|ref|ZP_01869725.1| porphobilinogen deaminase [Vibrio shilonii AK1]
gi|148834664|gb|EDL51652.1| porphobilinogen deaminase [Vibrio shilonii AK1]
Length = 329
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 170/305 (55%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +P RI TR SPLAL A + +L+ H P + ++ + TKGD I + L ++GGK
Sbjct: 20 QTQPIRIATRKSPLALWQAHYVKDALIAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 77
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 78 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYTNISEL 137
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L R D+ + + RG + TRL KL+N + AI+LA AG+KRL+
Sbjct: 138 PQGAVVGTCSLRRQCQLKEQRPDLVIKELRGNVGTRLGKLDNGEYDAIILAAAGLKRLEL 197
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ + E+ P+ GQGA+ IE +++ + +L++ +NH +T D V CERA L+
Sbjct: 198 ESRIRSFIEPEESLPAVGQGAVGIECRLDDERLIKLLEPLNHTNTADRVLCERAMNLTLE 257
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG G R DA +G A +
Sbjct: 258 GGCQVPIGSYSLIDGDEIWLRALVGEPDGSKIVRGEIRGKRADAEALGVQLANQLLNDGA 317
Query: 302 KNVFN 306
K +
Sbjct: 318 KEILE 322
>gi|308051395|ref|YP_003914961.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799]
gi|307633585|gb|ADN77887.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799]
Length = 310
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 176/305 (57%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L H P + ++ +STKGDRI + L ++GG
Sbjct: 1 MARKEIRIATRKSPLALWQAEFVKAELEKAH--PGLTVTLLKMSTKGDRILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E +++GE D AVHS KD+P + +GL ++ RED RD F+S+T ++L D
Sbjct: 59 KGLFVKELEVAMLNGEADIAVHSMKDVPVEFPEGLGLAVICDREDPRDAFVSNTYKNLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++G+SSLRR+ L R D+ V D RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPHGAIVGSSSLRRQCQLRAMRPDLDVRDLRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I + E P+ GQGA+ IE +++ + L+ V+NH T V ERA L
Sbjct: 179 LEERITAFIEPEQSLPANGQGAVGIECRLDDAELLALIGVLNHAPTHARVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I ++ +G TL+ G+V DG + G DA +G + A+ +
Sbjct: 239 EGGCQVPIGAYSVIEGDTLWLRGLVGDPDGSKIIQDELRGPVADAQKLGIELAERLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AGEIL 303
>gi|320154944|ref|YP_004187323.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O]
gi|319930256|gb|ADV85120.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O]
Length = 312
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+
Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHTDTADRVKCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A +G ++ +V DG G R A +G A + + +
Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREI 303
Query: 305 F 305
Sbjct: 304 L 304
>gi|261250035|ref|ZP_05942612.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891]
gi|260939539|gb|EEX95524.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891]
Length = 312
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALKAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GT SLRR+ L +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+
Sbjct: 121 PQGAIVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDDGQYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA L+
Sbjct: 181 EERIKSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKETADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG G+R DA +G + A +
Sbjct: 241 GGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIIRGEIRGSRADAETLGVELANQLLDDGA 300
Query: 302 KNVF 305
K +
Sbjct: 301 KEIL 304
>gi|27364543|ref|NP_760071.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6]
gi|37678265|ref|NP_932874.1| porphobilinogen deaminase [Vibrio vulnificus YJ016]
gi|33301181|sp|Q8DD85|HEM3_VIBVU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|55976475|sp|Q7MQC7|HEM3_VIBVY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|27360662|gb|AAO09598.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6]
gi|37197004|dbj|BAC92845.1| porphobilinogen deaminase [Vibrio vulnificus YJ016]
Length = 312
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+
Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A +G ++ +V DG G R A +G A + + +
Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREI 303
Query: 305 F 305
Sbjct: 304 L 304
>gi|262172879|ref|ZP_06040557.1| porphobilinogen deaminase [Vibrio mimicus MB-451]
gi|261893955|gb|EEY39941.1| porphobilinogen deaminase [Vibrio mimicus MB-451]
Length = 311
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|229525016|ref|ZP_04414421.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426]
gi|229338597|gb|EEO03614.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426]
Length = 317
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|322834934|ref|YP_004214961.1| porphobilinogen deaminase [Rahnella sp. Y9602]
gi|321170135|gb|ADW75834.1| porphobilinogen deaminase [Rahnella sp. Y9602]
Length = 313
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A +S LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAQYVQSRLMACH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYASLAD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGSIVGTSSLRRQCQLRQKRPDLMIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L E+ P+ GQGA+ IE +++ ++L+ + H +T V ERA L
Sbjct: 179 LENRITYALTPEECLPAVGQGAVGIECRLDDQTTRDLLAPLAHRETTLRVQAERAMNMRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ +V A DG R G +A +G D A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDELWLRALVGAPDGSQMVCGERRGPAANAHRMGVDLAEELLANG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|332304814|ref|YP_004432665.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172143|gb|AEE21397.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 309
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 174/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG
Sbjct: 1 MSDRVIRIATRKSTLAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T ++++
Sbjct: 59 KGLFIKELEIAMSEGRADIAVHSMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+++ D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L
Sbjct: 179 MQERIKAYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G LY G+V + DG + + + G+ DA +IG D A+ +
Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSLLLQAEKRGSINDAQSIGIDVAEQLLEKG 298
Query: 301 NKNVFN 306
++
Sbjct: 299 AGDILQ 304
>gi|15640152|ref|NP_229779.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587718|ref|ZP_01677479.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121728303|ref|ZP_01681334.1| porphobilinogen deaminase [Vibrio cholerae V52]
gi|147675270|ref|YP_001218298.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|153818935|ref|ZP_01971602.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457]
gi|153822325|ref|ZP_01974992.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|227080356|ref|YP_002808907.1| porphobilinogen deaminase [Vibrio cholerae M66-2]
gi|229508398|ref|ZP_04397902.1| porphobilinogen deaminase [Vibrio cholerae BX 330286]
gi|229508921|ref|ZP_04398411.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|229517035|ref|ZP_04406481.1| porphobilinogen deaminase [Vibrio cholerae RC9]
gi|229606671|ref|YP_002877319.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236]
gi|254851504|ref|ZP_05240854.1| porphobilinogen deaminase [Vibrio cholerae MO10]
gi|298501111|ref|ZP_07010911.1| porphobilinogen deaminase [Vibrio cholerae MAK 757]
gi|9654520|gb|AAF93298.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121548017|gb|EAX58095.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121629433|gb|EAX61862.1| porphobilinogen deaminase [Vibrio cholerae V52]
gi|126510497|gb|EAZ73091.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457]
gi|126520151|gb|EAZ77374.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|146317153|gb|ABQ21692.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|227008244|gb|ACP04456.1| porphobilinogen deaminase [Vibrio cholerae M66-2]
gi|227011878|gb|ACP08088.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|229346098|gb|EEO11070.1| porphobilinogen deaminase [Vibrio cholerae RC9]
gi|229354038|gb|EEO18971.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|229354671|gb|EEO19593.1| porphobilinogen deaminase [Vibrio cholerae BX 330286]
gi|229369326|gb|ACQ59749.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236]
gi|254847209|gb|EET25623.1| porphobilinogen deaminase [Vibrio cholerae MO10]
gi|297540145|gb|EFH76206.1| porphobilinogen deaminase [Vibrio cholerae MAK 757]
Length = 317
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|229515846|ref|ZP_04405304.1| porphobilinogen deaminase [Vibrio cholerae TMA 21]
gi|229527138|ref|ZP_04416532.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)]
gi|229335369|gb|EEO00852.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)]
gi|229347109|gb|EEO12070.1| porphobilinogen deaminase [Vibrio cholerae TMA 21]
Length = 317
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|153803403|ref|ZP_01957989.1| porphobilinogen deaminase [Vibrio cholerae MZO-3]
gi|124121060|gb|EAY39803.1| porphobilinogen deaminase [Vibrio cholerae MZO-3]
Length = 311
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|153214841|ref|ZP_01949649.1| porphobilinogen deaminase [Vibrio cholerae 1587]
gi|153830620|ref|ZP_01983287.1| porphobilinogen deaminase [Vibrio cholerae 623-39]
gi|124115084|gb|EAY33904.1| porphobilinogen deaminase [Vibrio cholerae 1587]
gi|148873892|gb|EDL72027.1| porphobilinogen deaminase [Vibrio cholerae 623-39]
Length = 311
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|258623142|ref|ZP_05718154.1| porphobilinogen deaminase [Vibrio mimicus VM573]
gi|258584625|gb|EEW09362.1| porphobilinogen deaminase [Vibrio mimicus VM573]
Length = 326
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 16 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 74 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 134 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 194 LESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 254 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 313
Query: 301 NKNVFN 306
K +
Sbjct: 314 AKEILE 319
>gi|59710673|ref|YP_203449.1| porphobilinogen deaminase [Vibrio fischeri ES114]
gi|197333951|ref|YP_002154835.1| porphobilinogen deaminase [Vibrio fischeri MJ11]
gi|75431912|sp|Q5E8T5|HEM3_VIBF1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706298|sp|B5FF97|HEM3_VIBFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|59478774|gb|AAW84561.1| hydroxymethylbilane synthase [Vibrio fischeri ES114]
gi|197315441|gb|ACH64888.1| porphobilinogen deaminase [Vibrio fischeri MJ11]
Length = 311
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 168/307 (54%), Gaps = 3/307 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MSQQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L R D+ + + RG + TRL KL++ AI+LA AG+ RL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEARPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E IK + E P+ GQGA+ IE +++ + + L++ +NH +T + V CERA
Sbjct: 179 GLEDRIKSAIEPEQSLPAVGQGAVGIEARLDDDRLRALLEPLNHPETANRVLCERAMNNR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG + +G DA +G A +
Sbjct: 239 LEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSVMIRGEVSGPVSDAEALGTQLADQLLND 298
Query: 300 SNKNVFN 306
K +
Sbjct: 299 GAKEILE 305
>gi|255743926|ref|ZP_05417881.1| porphobilinogen deaminase [Vibrio cholera CIRS 101]
gi|262151165|ref|ZP_06028304.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1]
gi|262167035|ref|ZP_06034752.1| porphobilinogen deaminase [Vibrio cholerae RC27]
gi|262189994|ref|ZP_06048299.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93]
gi|11386839|sp|Q9KVM1|HEM3_VIBCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|255738409|gb|EET93799.1| porphobilinogen deaminase [Vibrio cholera CIRS 101]
gi|262024553|gb|EEY43237.1| porphobilinogen deaminase [Vibrio cholerae RC27]
gi|262031059|gb|EEY49684.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1]
gi|262034117|gb|EEY52552.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93]
Length = 311
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|327483021|gb|AEA77428.1| Porphobilinogen deaminase [Vibrio cholerae LMA3894-4]
Length = 311
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|254291929|ref|ZP_04962710.1| porphobilinogen deaminase [Vibrio cholerae AM-19226]
gi|150422139|gb|EDN14105.1| porphobilinogen deaminase [Vibrio cholerae AM-19226]
Length = 311
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSKIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|262404857|ref|ZP_06081411.1| porphobilinogen deaminase [Vibrio sp. RC586]
gi|262348941|gb|EEY98080.1| porphobilinogen deaminase [Vibrio sp. RC586]
Length = 311
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYVKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDDIWLRALVGEPDGSQIVHGEIRGPRSEAEQLGITLAEQLLEQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|163803631|ref|ZP_02197496.1| porphobilinogen deaminase [Vibrio sp. AND4]
gi|159172579|gb|EDP57439.1| porphobilinogen deaminase [Vibrio sp. AND4]
Length = 312
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQSAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++ DL
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPIDFPDGLGLVTICEREDPRDAFVSNTYNNIDDL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + ++L++ +NH DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRIDDERLRKLLEPLNHRDTADRVRCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG + +G+R DA +G A +
Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIHGHRNDAEALGVQLANELLANGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|269961540|ref|ZP_06175903.1| porphobilinogen deaminase [Vibrio harveyi 1DA3]
gi|269833769|gb|EEZ87865.1| porphobilinogen deaminase [Vibrio harveyi 1DA3]
Length = 312
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHYVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG + G+R DA +G A +
Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLENGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|258626632|ref|ZP_05721462.1| porphobilinogen deaminase [Vibrio mimicus VM603]
gi|258581136|gb|EEW06055.1| porphobilinogen deaminase [Vibrio mimicus VM603]
Length = 311
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLVPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|262273217|ref|ZP_06051033.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886]
gi|262222795|gb|EEY74104.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886]
Length = 311
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 165/306 (53%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RI TR SPLAL A +++L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MTSTPIRIATRQSPLALWQAEFVKAALEATH--PGLTVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ S+ +
Sbjct: 59 KGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYTSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAMRPDLVIKDLRGNVGTRLGKLDNGEYDAIILASAGLKRLN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ + + L++ + +T V CERA L
Sbjct: 179 LHDRIRNEIEPEEILPAVGQGAVGIECRLDDERVRALLEPLADANTTYRVLCERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G A +G A+ +
Sbjct: 239 MGGCQVPIGSYAEIHGDQIHLRALVGEPDGSKIVRGEVTGPLEKAEELGTGLAEQLLDDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARAILE 304
>gi|153826278|ref|ZP_01978945.1| porphobilinogen deaminase [Vibrio cholerae MZO-2]
gi|149739946|gb|EDM54125.1| porphobilinogen deaminase [Vibrio cholerae MZO-2]
Length = 311
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGALGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|153835503|ref|ZP_01988170.1| porphobilinogen deaminase [Vibrio harveyi HY01]
gi|156972662|ref|YP_001443569.1| porphobilinogen deaminase [Vibrio harveyi ATCC BAA-1116]
gi|166217790|sp|A7MXU9|HEM3_VIBHB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148867929|gb|EDL67139.1| porphobilinogen deaminase [Vibrio harveyi HY01]
gi|156524256|gb|ABU69342.1| hypothetical protein VIBHAR_00314 [Vibrio harveyi ATCC BAA-1116]
Length = 312
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG + G+R DA +G A +
Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLENGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|254226598|ref|ZP_04920179.1| porphobilinogen deaminase [Vibrio cholerae V51]
gi|125620870|gb|EAZ49223.1| porphobilinogen deaminase [Vibrio cholerae V51]
Length = 317
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLTPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|297581838|ref|ZP_06943759.1| porphobilinogen deaminase [Vibrio cholerae RC385]
gi|297533932|gb|EFH72772.1| porphobilinogen deaminase [Vibrio cholerae RC385]
Length = 317
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L RSD+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARSDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|229520088|ref|ZP_04409516.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80]
gi|229342876|gb|EEO07866.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80]
Length = 317
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDAILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|254360510|ref|ZP_04976659.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213]
gi|261493197|ref|ZP_05989725.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495982|ref|ZP_05992397.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153091050|gb|EDN73055.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213]
gi|261308358|gb|EEY09646.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311145|gb|EEY12320.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 311
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 164/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A +S L P ++ ++ + TKGD I + L +IGGKG
Sbjct: 2 KDILRIATRQSPLALWQANFVKSELEK--HFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ SL+DL
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICEREDPRDAFVSNNYHSLEDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL +
Sbjct: 120 KGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET N+ + + +NH T V ERA L G
Sbjct: 180 ERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKLNHSSTACCVMAERAMNTRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I G+A +G L +V + DG S G++ +A +G A+ +
Sbjct: 240 GCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAKGHKQEAEQLGILVAEQLLAQGAD 299
Query: 303 NVF 305
+
Sbjct: 300 KIL 302
>gi|320178095|gb|EFW53075.1| Porphobilinogen deaminase [Shigella boydii ATCC 9905]
Length = 559
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|163748699|ref|ZP_02155952.1| porphobilinogen deaminase [Shewanella benthica KT99]
gi|161331809|gb|EDQ02613.1| porphobilinogen deaminase [Shewanella benthica KT99]
Length = 309
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ +S+ D
Sbjct: 59 KGLFVKELEVAILEDRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIGD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ +ID RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRGMRPDLKIIDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ ED P+ GQGA+ IE +N + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISTEDSLPANGQGAVGIECRTDNERVKALLAPLEHAETRFRVTAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G TL G+V DG + G + DA IG A+ +
Sbjct: 239 EGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTCVGPKTDAKAIGIALAEELLGKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|218550973|ref|YP_002384764.1| porphobilinogen deaminase [Escherichia fergusonii ATCC 35469]
gi|226740637|sp|B7LU53|HEM3_ESCF3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218358514|emb|CAQ91161.1| hydroxymethylbilane synthase [Escherichia fergusonii ATCC 35469]
Length = 313
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G ++ +V A DG R G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|167625822|ref|YP_001676116.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4]
gi|189028156|sp|B0TJ54|HEM3_SHEHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167355844|gb|ABZ78457.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4]
Length = 310
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 175/306 (57%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ D AVHS KD+P + +GL + RED RD F+S+T ++++D
Sbjct: 59 KGLFVKELEVAMLEGKADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL G+V DG + +GN+ DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|227114730|ref|ZP_03828386.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 313
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L+ E+ P+ GQGAI IE +++ + L+ +NH T V ERA L
Sbjct: 179 LEARIRCALSPEESLPAVGQGAIGIECRLDDEHVRHLLAPLNHPATAARVLAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R GN DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGNVSDAEQLGIALAEELLAKG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ASAILQ 304
>gi|114561627|ref|YP_749140.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400]
gi|122300909|sp|Q088L3|HEM3_SHEFN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114332920|gb|ABI70302.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400]
Length = 309
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L +IGG
Sbjct: 1 MSENIIRIATRKSPLAMWQAEFVKAELERIH--PGLTVELLPMSTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDLPVEFPEGLGLQVICEREDPRDAFVSNNYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LNERIANFISAEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G L G+V DG + +G++ DA+ +G A+ +
Sbjct: 239 EGGCQVPIGAFAEINGDNLTLRGLVGNPDGSQIIIGTVSGSKTDAVALGESLAEDLLSRG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|324111028|gb|EGC05015.1| porphobilinogen deaminase [Escherichia fergusonii B253]
gi|325499227|gb|EGC97086.1| porphobilinogen deaminase [Escherichia fergusonii ECD227]
Length = 313
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G ++ +V A DG R G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|170724850|ref|YP_001758876.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908]
gi|238059003|sp|B1KQC6|HEM3_SHEWM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169810197|gb|ACA84781.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908]
Length = 309
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PDLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPKGAVVGTSSLRRQCQIRAARPDLQIRDLRGNVGTRLGKLDAGTYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHAETRFRVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A TL G+V DG ++ G + DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIVDDTLTLRGLVGNPDGTQIIASTKVGPKTDAKALGISLAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|328472411|gb|EGF43277.1| porphobilinogen deaminase [Vibrio parahaemolyticus 10329]
Length = 312
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A +G ++ +V DG G+R D +G A +
Sbjct: 241 GGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDNGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|157368427|ref|YP_001476416.1| porphobilinogen deaminase [Serratia proteamaculans 568]
gi|167008819|sp|A8G848|HEM3_SERP5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157320191|gb|ABV39288.1| porphobilinogen deaminase [Serratia proteamaculans 568]
Length = 313
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMANH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRERRPDLIVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDETTRALLAPLNHAVTETRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G +L+ +V + DG R G A +G + A+ +
Sbjct: 239 EGGCQVPIGSYAELDGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGIELAEELLAQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AREILQ 304
>gi|157377265|ref|YP_001475865.1| porphobilinogen deaminase [Shewanella sediminis HAW-EB3]
gi|189028158|sp|A8G0W4|HEM3_SHESH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157319639|gb|ABV38737.1| Hydroxymethylbilane synthase [Shewanella sediminis HAW-EB3]
Length = 309
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRASRPDLVIRDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRINDERVKALLAPLEHTETRHRVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TL G+V DG E ++ G++ DA IG A+ +
Sbjct: 239 EGGCQVPIGAYAEIQDDTLTLRGLVGNPDGSHIIEATKVGSKTDAQAIGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKAILD 304
>gi|238750675|ref|ZP_04612174.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380]
gi|238711065|gb|EEQ03284.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380]
Length = 313
Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLNKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LKSRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLVPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G DA +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSEIIRGERRGPAEDAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|28899762|ref|NP_799367.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|153838754|ref|ZP_01991421.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810]
gi|260365170|ref|ZP_05777735.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030]
gi|260878130|ref|ZP_05890485.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034]
gi|260895813|ref|ZP_05904309.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466]
gi|260900854|ref|ZP_05909249.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037]
gi|32363175|sp|Q87KI9|HEM3_VIBPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28808014|dbj|BAC61251.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|149747840|gb|EDM58724.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810]
gi|308087192|gb|EFO36887.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466]
gi|308092784|gb|EFO42479.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034]
gi|308110595|gb|EFO48135.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037]
gi|308111033|gb|EFO48573.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030]
Length = 312
Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A +G ++ +V DG G+R D +G A +
Sbjct: 241 GGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDSGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|261823396|ref|YP_003261502.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163]
gi|261607409|gb|ACX89895.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163]
Length = 313
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQRL--NHLYPDLSVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L
Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G+TL+ +V A DG R G+ DA IG A+ +
Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRALVGAPDGSQMIVGERKGSVVDAEKIGIALAEELLAKG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ASAILQ 304
>gi|323495298|ref|ZP_08100379.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546]
gi|323310475|gb|EGA63658.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546]
Length = 312
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QTTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNSIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ + R D+ + + RG + TRL KL+ AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQIKEARPDLIIKELRGNVGTRLGKLDAGDYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA L+
Sbjct: 181 EERIKSFIEPEQSLPAVGQGAVGIECRLDDDRLIKLLEPLNHKETADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG G+R DA +G + A +
Sbjct: 241 GGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIVRGEIRGSRTDAEALGVELANQLLADGA 300
Query: 302 KNVF 305
K +
Sbjct: 301 KEIL 304
>gi|89074445|ref|ZP_01160922.1| porphobilinogen deaminase [Photobacterium sp. SKA34]
gi|89049733|gb|EAR55283.1| porphobilinogen deaminase [Photobacterium sp. SKA34]
Length = 310
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ + H P ++ ++P+ TKGD I + L ++GG
Sbjct: 1 MSNQLIRIATRKSPLAMWQAEFVKAEIEQAH--PGISVELVPMITKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L
Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLTALSDQATTTRVLCERAMNNHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G A +G A+ +
Sbjct: 239 QGGCQVPIGSYAELEGDQVWLRALVGEPDGSKIVRAEIRGPIEQAEQLGETLAEQLLNDG 298
Query: 301 NKNVFN 306
+++ +
Sbjct: 299 ARDILD 304
>gi|238765355|ref|ZP_04626280.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638]
gi|238696442|gb|EEP89234.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638]
Length = 313
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSNYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDYTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G+TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELDGNTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELADELLARG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|260774857|ref|ZP_05883759.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609282|gb|EEX35437.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450]
Length = 312
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAYYVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYANIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ + +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ G ++ +V DG G+R DA +G A +
Sbjct: 241 GGCQVPIGSYSLLDGDDIWLRALVGEPDGSKIVRGEIKGSRADAEKLGVTLANQLLDDGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|62182409|ref|YP_218826.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167553883|ref|ZP_02347627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168244626|ref|ZP_02669558.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168263173|ref|ZP_02685146.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168467648|ref|ZP_02701485.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442426|ref|YP_002043172.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197247501|ref|YP_002148864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|213029666|ref|ZP_03344113.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213416718|ref|ZP_03349862.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213425401|ref|ZP_03358151.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649584|ref|ZP_03379637.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865139|ref|ZP_03387258.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|62130042|gb|AAX67745.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|194401089|gb|ACF61311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195630016|gb|EDX48676.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197211204|gb|ACH48601.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205321788|gb|EDZ09627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205336530|gb|EDZ23294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205348255|gb|EDZ34886.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|322716902|gb|EFZ08473.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 320
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 ARAIL 310
>gi|16767209|ref|NP_462824.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194449507|ref|YP_002047954.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|207859144|ref|YP_002245795.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|6960263|gb|AAF33453.1| 89% identity with E. coli porphobilinogen deaminase (HEMC)
(SP:P06983); contains similarity to Pfam family PF01379
(Porphobilinogen deaminase), score=627.8, E=6.2e-185,
N=1 [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16422502|gb|AAL22783.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194407811|gb|ACF68030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|206710947|emb|CAR35314.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261249062|emb|CBG26922.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996216|gb|ACY91101.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160454|emb|CBW19983.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|320088349|emb|CBY98109.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|323132286|gb|ADX19716.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326625658|gb|EGE32003.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|332990774|gb|AEF09757.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 318
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 64 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 184 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 244 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 ARAIL 308
>gi|200388118|ref|ZP_03214730.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605216|gb|EDZ03761.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 320
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVIVRGERRGSPEQAEQMGISLAEELLENG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 ARAIL 310
>gi|157960202|ref|YP_001500236.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345]
gi|189028157|sp|A8GZG4|HEM3_SHEPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157845202|gb|ABV85701.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345]
Length = 310
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++++D
Sbjct: 59 KGLFVKELEVAMLEGLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL G+V DG S +G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITASSSGSTADAEKLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|127511252|ref|YP_001092449.1| porphobilinogen deaminase [Shewanella loihica PV-4]
gi|126636547|gb|ABO22190.1| porphobilinogen deaminase [Shewanella loihica PV-4]
Length = 317
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L H+ + ++P+STKGD I + L ++GG
Sbjct: 9 MSQNVIRIATRKSPLAMWQAEFVKAELEKAHE--GLVVELLPMSTKGDVILDTPLAKVGG 66
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ D AVHS KD+P +GL + RED RD F+S+T +++++
Sbjct: 67 KGLFVKELEVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEE 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 127 LPQGAIVGTSSLRRQCQIRAARPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++ ED P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 187 LEDRIASFISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAMNTRL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL G+V DG + +G + DA +G A +
Sbjct: 247 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQVIRGTTSGAKQDAEQLGIALADELLSKG 306
Query: 301 NKNVFN 306
K + +
Sbjct: 307 AKAILD 312
>gi|254230107|ref|ZP_04923503.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|262392880|ref|YP_003284734.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|151937352|gb|EDN56214.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|262336474|gb|ACY50269.1| porphobilinogen deaminase [Vibrio sp. Ex25]
Length = 312
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G ++ +V DG G+R D +G A +
Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDNGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|86148167|ref|ZP_01066465.1| porphobilinogen deaminase [Vibrio sp. MED222]
gi|218710949|ref|YP_002418570.1| porphobilinogen deaminase [Vibrio splendidus LGP32]
gi|254800262|sp|B7VMD9|HEM3_VIBSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85834014|gb|EAQ52174.1| porphobilinogen deaminase [Vibrio sp. MED222]
gi|218323968|emb|CAV20330.1| Porphobilinogen deaminase [Vibrio splendidus LGP32]
Length = 312
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 172/301 (57%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+
Sbjct: 124 AVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I ++ G ++ +V DG +G R DA +G A + + +
Sbjct: 244 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDDGAREI 303
Query: 305 F 305
Sbjct: 304 L 304
>gi|238784737|ref|ZP_04628740.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970]
gi|238714333|gb|EEQ06342.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970]
Length = 313
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S + L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSSYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + +E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPVEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDVLWLRALVGAPDGSEIIRGERRGPANNAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|323500165|ref|ZP_08105110.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326]
gi|323314794|gb|EGA67860.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326]
Length = 312
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSSPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T S+ +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPSGLGLVTICEREDPRDAFVSNTYNSIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A +G ++ +V DG G R ++ +G A +
Sbjct: 241 GGCQVPIGSYALLEGDDIWLRALVGEPDGSQIVRGEIKGPRSESEALGIKLANQLLDEGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|317046390|ref|YP_004114038.1| porphobilinogen deaminase [Pantoea sp. At-9b]
gi|316948007|gb|ADU67482.1| porphobilinogen deaminase [Pantoea sp. At-9b]
Length = 313
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELVPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ S+
Sbjct: 59 KGLFVKELELAMLENRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNHYDSIDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + L++ +N DT V ERA L
Sbjct: 179 LEDRIRFALPAEISLPAVGQGAVGIECRLDDAELITLLQALNDGDTAVCVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G L+ G+V + DG R G R A +G A+ +
Sbjct: 239 EGGCQVPIGSFAVLEGDQLWLRGLVGSPDGSQMITGERRGPRDQAEQMGISLAEELLDNG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ASEIL 303
>gi|188532369|ref|YP_001906166.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99]
gi|238058922|sp|B2VG55|HEM3_ERWT9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188027411|emb|CAO95258.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99]
Length = 313
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+ H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRRSPLALWQAEYVQRRLIACH--PGLRVELLPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P GL + A RED D F+SH S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ + L+ +NH +T V+ ERA L
Sbjct: 179 LGDRIRQVMPAEESLPAVGQGAVGIECRLDDIQTIALLAALNHSETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + L+ G+V + DG R G R DA +G A+ +
Sbjct: 239 EGGCQVPIGSYALLEDDQLWLRGLVGSPDGNEMVRGERRGPRADAEKMGISLAEELLENG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|205354497|ref|YP_002228298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205274278|emb|CAR39298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629631|gb|EGE35974.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 318
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 64 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 184 LEPRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 244 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 ARAIL 308
>gi|253690341|ref|YP_003019531.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259646261|sp|C6DHC2|HEM3_PECCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|251756919|gb|ACT14995.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 313
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 119/306 (38%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGAI IE +N+ + ++L+ +NH T V ERA L
Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R GN DA IG A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIGIALAEELLAKG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ASAILQ 304
>gi|119776386|ref|YP_929126.1| porphobilinogen deaminase [Shewanella amazonensis SB2B]
gi|119768886|gb|ABM01457.1| Hydroxymethylbilane synthase [Shewanella amazonensis SB2B]
Length = 326
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 17 MSQNLIRIATRKSPLAMWQAEFVKAELERIH--PDLTVELLPMSTKGDVILDTPLAKVGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T +S+ +
Sbjct: 75 KGLFVKELEVAMLEGRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKSIDE 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL++ + AI+LA AG+ RLK
Sbjct: 135 LPQGAVVGTSSLRRQCQLRARRPDLIIKDLRGNVGTRLAKLDSGEYDAIILAAAGLIRLK 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H++T V ERA L
Sbjct: 195 LAERIAGFISTEESLPANGQGAVGIECRTNDERVKALLAPLEHKETRLRVLAERAMNTRL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA + TL G+V DG S G+ DAI +G A +
Sbjct: 255 EGGCQVPIGAFAEIEADTLTLRGLVGNPDGSEVITGSVTGSTADAIALGHQLADDLLSRG 314
Query: 301 NKNVFN 306
K + +
Sbjct: 315 AKTILD 320
>gi|251787830|ref|YP_003002551.1| porphobilinogen deaminase [Dickeya zeae Ech1591]
gi|247536451|gb|ACT05072.1| porphobilinogen deaminase [Dickeya zeae Ech1591]
Length = 322
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L D H P + ++P+ T+GD + + L ++GG
Sbjct: 11 MVDTILRIATRQSPLALWQAHFVKQRLEDCH--PGLQVELVPMVTRGDVLLDTPLAKVGG 68
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L D
Sbjct: 69 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYATLDD 128
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ L +R D+ V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 129 LPEGACVGTSSLRRQCQLRAYRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 188
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L+ E P+ GQGA+ +E +++ + + L+ +NHEDT V ERA L
Sbjct: 189 LAHRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHEDTATRVLAERAMNTRL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TLY +V A DG R G+R DA +G A +
Sbjct: 249 EGGCQVPIGSYAELQDETLYLRALVGAPDGSRIIYAERRGSRQDAETLGIALADELLERG 308
Query: 301 NKNVFN 306
+++
Sbjct: 309 ARDILQ 314
>gi|270264251|ref|ZP_06192518.1| porphobilinogen deaminase [Serratia odorifera 4Rx13]
gi|270041900|gb|EFA14997.1| porphobilinogen deaminase [Serratia odorifera 4Rx13]
Length = 313
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ S
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIDFPAGLGLVTICERDDPRDAFVSNRFASFDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR++ L R D+ V D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQSQLRERRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDDATRALLAPLNHAATDIRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G +L+ +V + DG R G A +G + A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGVELAEELLARG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|50123108|ref|YP_052275.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043]
gi|55976381|sp|Q6CZG3|HEM3_ERWCT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49613634|emb|CAG77085.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043]
Length = 313
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHFYPDLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L
Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G+ DA IG A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGSVSDAEKIGVALAEELLAKG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ASAILQ 304
>gi|327395980|dbj|BAK13402.1| porphobilinogen deaminase HemC [Pantoea ananatis AJ13355]
Length = 317
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + L+ H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLNKIFRIATRQSPLALWQAQYVQQRLISAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KD+P +GL + R+D RD F+S+ S+ +
Sbjct: 63 KGLFVKELEQAMLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDE 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL
Sbjct: 123 LPQGAVIGTSSLRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++ L + P+ GQGA+ IE +++ L++ +NH+DT V ERA L
Sbjct: 183 LADRIRQPLPADISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G L+ G+V A DG + R G R A +G A +
Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGG 302
Query: 301 NKNVF 305
+ +
Sbjct: 303 AREIL 307
>gi|16762196|ref|NP_457813.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143685|ref|NP_807027.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415793|ref|YP_152868.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194734788|ref|YP_002116870.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197264899|ref|ZP_03164973.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197301061|ref|ZP_02663450.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197364723|ref|YP_002144360.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243181|ref|YP_002217871.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205358019|ref|ZP_02574964.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205360118|ref|ZP_02834695.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|224585757|ref|YP_002639556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912944|ref|ZP_04656781.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289825622|ref|ZP_06544800.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|61225723|sp|P0A1Q8|HEM3_SALTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|61225724|sp|P0A1Q9|HEM3_SALTI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81599707|sp|Q5PKL7|HEM3_SALPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706297|sp|B5FN93|HEM3_SALDC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059000|sp|B5BIU8|HEM3_SALPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059001|sp|B4TNV3|HEM3_SALSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800257|sp|C0Q3B3|HEM3_SALPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|25292188|pir||AD0920 porphobilinogen deaminase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16504500|emb|CAD09382.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139320|gb|AAO70887.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56130050|gb|AAV79556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194710290|gb|ACF89511.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197096200|emb|CAR61796.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197243154|gb|EDY25774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288774|gb|EDY28149.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937697|gb|ACH75030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205328154|gb|EDZ14918.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205340974|gb|EDZ27738.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|224470285|gb|ACN48115.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|312915057|dbj|BAJ39031.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225457|gb|EFX50514.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613018|gb|EFY09969.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617394|gb|EFY14294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625614|gb|EFY22436.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627037|gb|EFY23830.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631247|gb|EFY28010.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638280|gb|EFY34979.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642784|gb|EFY39371.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646974|gb|EFY43476.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650361|gb|EFY46774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656348|gb|EFY52642.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657573|gb|EFY53843.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665984|gb|EFY62165.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666723|gb|EFY62900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671034|gb|EFY67164.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679259|gb|EFY75311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681663|gb|EFY77690.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686010|gb|EFY81998.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192636|gb|EFZ77864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196502|gb|EFZ81652.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203746|gb|EFZ88767.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323205379|gb|EFZ90353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323210748|gb|EFZ95624.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215916|gb|EGA00649.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221409|gb|EGA05827.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227573|gb|EGA11729.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231758|gb|EGA15869.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236173|gb|EGA20250.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239590|gb|EGA23638.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244314|gb|EGA28322.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249589|gb|EGA33501.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250319|gb|EGA34205.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256526|gb|EGA40257.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259776|gb|EGA43409.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265184|gb|EGA48682.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268387|gb|EGA51859.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 313
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 179 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 239 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|170769870|ref|ZP_02904323.1| porphobilinogen deaminase [Escherichia albertii TW07627]
gi|170121308|gb|EDS90239.1| porphobilinogen deaminase [Escherichia albertii TW07627]
Length = 313
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRTALPPEVSLPAVGQGAVGIECRLNDTRTRELLAALNHNETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELVDGEIWLRALVGAPDGSQIIRGERRGSPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|312884198|ref|ZP_07743909.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368126|gb|EFP95667.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 312
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L+ H P + +I + TKGD I + L ++GGK
Sbjct: 3 KSTPIRIATRKSPLALWQANYVKEALIKAH--PGLQVELITMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+ Q++ L
Sbjct: 61 GLFVKELENAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNHYQNIDAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++++GT SLRR+ + +R D+ V + RG + TRLNKL+ + AI+LA AG+KRL
Sbjct: 121 PNNAIVGTCSLRRQCQIKEYRPDLIVKELRGNVGTRLNKLDAGEYDAIILAAAGLKRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I L E P+ GQGA+ IE +++ + +L+ +N DT D V CERA L+
Sbjct: 181 ESRIASFLEPEQSLPAVGQGAVGIECRLDDQRLIDLLAPLNDRDTNDRVKCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ +G ++ +V DG G R DA +G + A +
Sbjct: 241 GGCQVPIGSYSVLEGEQIWLRALVGEPDGSQMVRGEIRGKRDDAEQLGIELANQLLDKGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|37528461|ref|NP_931806.1| porphobilinogen deaminase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|55976477|sp|Q7MYN1|HEM3_PHOLL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|36787899|emb|CAE17016.1| porphobilinogen deaminase (PBG) (hydroxymethylbilane synthase)
(HMBS) (pre-uroporphyrinogen synthase) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 313
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L +IGG
Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQCH--PDLEVQLVPMVTQGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ V D RG + TRLNKL+N AI+LA AG+KRLK
Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLDNGHYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IE +++ + Q L+ +NH DT V ERA L
Sbjct: 179 LHERIRTPLTAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V A DG + R DA G + A+ +
Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTALPKDACQAGVELAEELLERG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|123440582|ref|YP_001004576.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332159812|ref|YP_004296389.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|158512667|sp|A1JI86|HEM3_YERE8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|122087543|emb|CAL10324.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607646|emb|CBY29144.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664042|gb|ADZ40686.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862558|emb|CBX72712.1| porphobilinogen deaminase [Yersinia enterocolitica W22703]
Length = 313
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDNFTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|227325802|ref|ZP_03829826.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 313
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGAI IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDEHVRQLLAPLNHPATAARVLAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGRVSDAEQLGIALAEELLAKG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ASAILQ 304
>gi|300939977|ref|ZP_07154605.1| porphobilinogen deaminase [Escherichia coli MS 21-1]
gi|300455181|gb|EFK18674.1| porphobilinogen deaminase [Escherichia coli MS 21-1]
Length = 320
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|56461658|ref|YP_156939.1| porphobilinogen deaminase [Idiomarina loihiensis L2TR]
gi|61213262|sp|Q5QUS3|HEM3_IDILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56180668|gb|AAV83390.1| Porphobilinogen deaminase [Idiomarina loihiensis L2TR]
Length = 313
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR S LAL A + L ++H P ++ ++P+STKGD I + L +IGG
Sbjct: 1 MTQR-VRIATRKSKLALWQAEHIQQRLEELH--PGLSVELVPMSTKGDVILDTPLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + GL++ RED RD F+S+ ++L +
Sbjct: 58 KGLFVKELEVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+
Sbjct: 118 LPEGAVVGTCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLE 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + +E P+ GQGA+ IE ++ + + L+ + ++T V ERA L
Sbjct: 178 LGDRITSFIPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C+ I +A +G +Y G+V DG G A +G + A+ +
Sbjct: 238 DGGCQVPIGAYAELEGDEVYLRGLVGEPDGGKVLRDEVRGPASKAEELGSELAERLLKQG 297
Query: 301 NKNVF 305
+
Sbjct: 298 AAEIL 302
>gi|204930376|ref|ZP_03221353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320780|gb|EDZ05982.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 320
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERHPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 ARAIL 310
>gi|269964925|ref|ZP_06179095.1| porphobilinogen deaminase [Vibrio alginolyticus 40B]
gi|269830401|gb|EEZ84625.1| porphobilinogen deaminase [Vibrio alginolyticus 40B]
Length = 312
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 61 GLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G ++ +V DG G+R D +G A +
Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDNGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|15804393|ref|NP_290433.1| porphobilinogen deaminase [Escherichia coli O157:H7 EDL933]
gi|15833989|ref|NP_312762.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai]
gi|300900647|ref|ZP_07118805.1| porphobilinogen deaminase [Escherichia coli MS 198-1]
gi|301025752|ref|ZP_07189267.1| porphobilinogen deaminase [Escherichia coli MS 69-1]
gi|331655487|ref|ZP_08356480.1| hydroxymethylbilane synthase [Escherichia coli M718]
gi|331675273|ref|ZP_08376024.1| hydroxymethylbilane synthase [Escherichia coli TA280]
gi|12518669|gb|AAG58997.1|AE005611_7 porphobilinogen deaminase = hydroxymethylbilane synthase
[Escherichia coli O157:H7 str. EDL933]
gi|13364211|dbj|BAB38158.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai]
gi|209753308|gb|ACI74961.1| adenylate cyclase [Escherichia coli]
gi|209753310|gb|ACI74962.1| adenylate cyclase [Escherichia coli]
gi|209753312|gb|ACI74963.1| adenylate cyclase [Escherichia coli]
gi|209753316|gb|ACI74965.1| adenylate cyclase [Escherichia coli]
gi|300355863|gb|EFJ71733.1| porphobilinogen deaminase [Escherichia coli MS 198-1]
gi|300395875|gb|EFJ79413.1| porphobilinogen deaminase [Escherichia coli MS 69-1]
gi|320660969|gb|EFX28412.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. USDA 5905]
gi|331046808|gb|EGI18892.1| hydroxymethylbilane synthase [Escherichia coli M718]
gi|331067559|gb|EGI38963.1| hydroxymethylbilane synthase [Escherichia coli TA280]
Length = 320
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|253775572|ref|YP_003038403.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300930031|ref|ZP_07145463.1| porphobilinogen deaminase [Escherichia coli MS 187-1]
gi|253326616|gb|ACT31218.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300462064|gb|EFK25557.1| porphobilinogen deaminase [Escherichia coli MS 187-1]
Length = 320
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|311281516|ref|YP_003943747.1| porphobilinogen deaminase [Enterobacter cloacae SCF1]
gi|308750711|gb|ADO50463.1| porphobilinogen deaminase [Enterobacter cloacae SCF1]
Length = 318
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLRIATRQSPLALWQAHYVKDRLTACH--PGLQVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL ++ RED RD F+S+ SL
Sbjct: 64 KGLFVKELELALLEHRADIAVHSMKDVPVEFPQGLGLTTICEREDPRDAFVSNQYASLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAAQRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LESRIRQALSPEQSLPAVGQGAVGIECRLDDDATRALLAPLNHPETAVRVGAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ +V A DG R G +A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELQGGELWLRALVGAPDGSRMVRGERRGTPEEAERLGVSLAEELLDNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|91227534|ref|ZP_01261871.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01]
gi|91188558|gb|EAS74850.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01]
Length = 312
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK
Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PSLEVELVTMVTKGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 61 GLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+
Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G ++ +V DG G+R D +G A +
Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDNGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|288937772|ref|YP_003441831.1| porphobilinogen deaminase [Klebsiella variicola At-22]
gi|288892481|gb|ADC60799.1| porphobilinogen deaminase [Klebsiella variicola At-22]
Length = 318
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNG 303
Query: 301 NKNVF 305
+++
Sbjct: 304 ARDIL 308
>gi|187776117|ref|ZP_02800653.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196]
gi|188025006|ref|ZP_02775407.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113]
gi|189010242|ref|ZP_02805709.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076]
gi|189401833|ref|ZP_02778707.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401]
gi|189403100|ref|ZP_02793091.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486]
gi|189404376|ref|ZP_02788935.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501]
gi|189404861|ref|ZP_02811648.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869]
gi|208806069|ref|ZP_03248406.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206]
gi|208812922|ref|ZP_03254251.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045]
gi|208819553|ref|ZP_03259873.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042]
gi|209396873|ref|YP_002273321.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115]
gi|217324566|ref|ZP_03440650.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588]
gi|261225578|ref|ZP_05939859.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK2000]
gi|261255624|ref|ZP_05948157.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK966]
gi|187768841|gb|EDU32685.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196]
gi|188015439|gb|EDU53561.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113]
gi|189001539|gb|EDU70525.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076]
gi|189359021|gb|EDU77440.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401]
gi|189362764|gb|EDU81183.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486]
gi|189365984|gb|EDU84400.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501]
gi|189373238|gb|EDU91654.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869]
gi|208725870|gb|EDZ75471.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206]
gi|208734199|gb|EDZ82886.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045]
gi|208739676|gb|EDZ87358.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042]
gi|209158273|gb|ACI35706.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115]
gi|217320787|gb|EEC29211.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588]
gi|320191103|gb|EFW65753.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. EC1212]
gi|320666093|gb|EFX33107.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. LSU-61]
gi|326344260|gb|EGD68020.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1125]
gi|326347912|gb|EGD71626.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1044]
Length = 318
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|157163278|ref|YP_001460596.1| porphobilinogen deaminase [Escherichia coli HS]
gi|170022172|ref|YP_001727126.1| porphobilinogen deaminase [Escherichia coli ATCC 8739]
gi|188494806|ref|ZP_03002076.1| porphobilinogen deaminase [Escherichia coli 53638]
gi|254039017|ref|ZP_04873068.1| porphobilinogen deaminase [Escherichia sp. 1_1_43]
gi|300950432|ref|ZP_07164354.1| porphobilinogen deaminase [Escherichia coli MS 116-1]
gi|300955191|ref|ZP_07167588.1| porphobilinogen deaminase [Escherichia coli MS 175-1]
gi|301646129|ref|ZP_07246029.1| porphobilinogen deaminase [Escherichia coli MS 146-1]
gi|331644538|ref|ZP_08345658.1| hydroxymethylbilane synthase [Escherichia coli H736]
gi|157068958|gb|ABV08213.1| porphobilinogen deaminase [Escherichia coli HS]
gi|169757100|gb|ACA79799.1| porphobilinogen deaminase [Escherichia coli ATCC 8739]
gi|188490005|gb|EDU65108.1| porphobilinogen deaminase [Escherichia coli 53638]
gi|226838708|gb|EEH70736.1| porphobilinogen deaminase [Escherichia sp. 1_1_43]
gi|260451352|gb|ACX41774.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|300317908|gb|EFJ67692.1| porphobilinogen deaminase [Escherichia coli MS 175-1]
gi|300450239|gb|EFK13859.1| porphobilinogen deaminase [Escherichia coli MS 116-1]
gi|301075655|gb|EFK90461.1| porphobilinogen deaminase [Escherichia coli MS 146-1]
gi|315138381|dbj|BAJ45540.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|331036210|gb|EGI08445.1| hydroxymethylbilane synthase [Escherichia coli H736]
Length = 320
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|194438640|ref|ZP_03070728.1| porphobilinogen deaminase [Escherichia coli 101-1]
gi|194422444|gb|EDX38443.1| porphobilinogen deaminase [Escherichia coli 101-1]
Length = 318
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|238760184|ref|ZP_04621331.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236]
gi|238701620|gb|EEP94190.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236]
Length = 313
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSHFAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLVIRDLRGNVGTRLAKLDKGEYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPVANAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|170680193|ref|YP_001746121.1| porphobilinogen deaminase [Escherichia coli SMS-3-5]
gi|170517911|gb|ACB16089.1| porphobilinogen deaminase [Escherichia coli SMS-3-5]
Length = 318
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|291285218|ref|YP_003502036.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615]
gi|209753314|gb|ACI74964.1| adenylate cyclase [Escherichia coli]
gi|290765091|gb|ADD59052.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615]
Length = 320
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPHGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|308188851|ref|YP_003932982.1| Porphobilinogen deaminase [Pantoea vagans C9-1]
gi|308059361|gb|ADO11533.1| Porphobilinogen deaminase [Pantoea vagans C9-1]
Length = 317
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+
Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 123 LPQGAVVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++ + E P+ GQGA+ IE +N+ +L++ +NH+DT V ERA L
Sbjct: 183 MQDRIRQAMPAEVSLPAVGQGAVGIECRLNDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G L+ G+V A DG++ R G R A +G A +
Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGMVGAPDGRVMVSGERRGPRAQAEQMGISLADELLNGG 302
Query: 301 NKNVF 305
+ +
Sbjct: 303 AREIL 307
>gi|215489131|ref|YP_002331562.1| porphobilinogen deaminase [Escherichia coli O127:H6 str. E2348/69]
gi|215267203|emb|CAS11651.1| hydroxymethylbilane synthase HemC [Escherichia coli O127:H6 str.
E2348/69]
Length = 320
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|307140503|ref|ZP_07499859.1| porphobilinogen deaminase [Escherichia coli H736]
Length = 318
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|193067963|ref|ZP_03048928.1| porphobilinogen deaminase [Escherichia coli E110019]
gi|192958583|gb|EDV89021.1| porphobilinogen deaminase [Escherichia coli E110019]
Length = 318
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|238789375|ref|ZP_04633161.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641]
gi|238722518|gb|EEQ14172.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641]
Length = 313
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQDLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSPNYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRSAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ +V A DG R G A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDILWLRALVGAPDGSEIIRGERRGPAQHAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|317494824|ref|ZP_07953235.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917149|gb|EFV38497.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 323
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 164/304 (53%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR SPLAL A+ R L P + ++P+ T+GD + + L ++GGKG
Sbjct: 13 NQTLRIATRQSPLALWQAYYVRDHLQA--HWPDLTVELVPMVTRGDVLLDTPLAKVGGKG 70
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L+DL
Sbjct: 71 LFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEREDPRDAFVSPKYARLEDLP 130
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR+ L R D+ V D RG + TRL KL+N AI+LA AG+KRL+ E
Sbjct: 131 EGSIVGTSSLRRQCQLREIRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAAAGLKRLELE 190
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L E P+ GQGA+ IE +N+ + Q L+ +N DT V+ ERA L+G
Sbjct: 191 ERIRYALPPEQSLPAVGQGAVGIECRLNDTRTQALLAPLNDIDTATRVSAERAMNTRLEG 250
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I ++ G ++ +V DG + R G R A +G A+ + +
Sbjct: 251 GCQVPIGSYSELNGDEIWLRALVGKPDGTLIIRGERRGPRAKAAELGVSLAEELLERGAR 310
Query: 303 NVFN 306
+
Sbjct: 311 EILE 314
>gi|310766129|gb|ADP11079.1| porphobilinogen deaminase [Erwinia sp. Ejp617]
Length = 313
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 173/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ L+ +NH++T V+ ERA L
Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLDDMHTIGLLAALNHDETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ G+V + DG R G+R DA +G A+ +
Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|227357162|ref|ZP_03841531.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus
mirabilis ATCC 29906]
gi|227162694|gb|EEI47661.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus
mirabilis ATCC 29906]
Length = 313
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V + DGK R + DA G A+ +
Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGSPDGKTILRGERLVSPEDAEQAGISLAEELLDKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|320197614|gb|EFW72226.1| Porphobilinogen deaminase [Escherichia coli WV_060327]
Length = 318
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|82546156|ref|YP_410103.1| porphobilinogen deaminase [Shigella boydii Sb227]
gi|300904058|ref|ZP_07121938.1| porphobilinogen deaminase [Escherichia coli MS 84-1]
gi|301303699|ref|ZP_07209820.1| porphobilinogen deaminase [Escherichia coli MS 124-1]
gi|81247567|gb|ABB68275.1| porphobilinogen deaminase [Shigella boydii Sb227]
gi|300403938|gb|EFJ87476.1| porphobilinogen deaminase [Escherichia coli MS 84-1]
gi|300840999|gb|EFK68759.1| porphobilinogen deaminase [Escherichia coli MS 124-1]
gi|315254168|gb|EFU34136.1| porphobilinogen deaminase [Escherichia coli MS 85-1]
gi|315296783|gb|EFU56075.1| porphobilinogen deaminase [Escherichia coli MS 16-3]
Length = 320
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|330827978|ref|YP_004390930.1| Porphobilinogen deaminase [Aeromonas veronii B565]
gi|328803114|gb|AEB48313.1| Porphobilinogen deaminase [Aeromonas veronii B565]
Length = 330
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L +H P + ++P+ST+GD+I + L ++GG
Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALH--PQLQVELVPMSTQGDKILDTPLAKVGG 79
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +++ +
Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAE 139
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHTETRARVLTERAMNRAL 259
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 260 QGGCQVPIGAYALVEGEQIWLRGLVGSPDGTQVIRDEIRGPLADGEALGEQLAQRLLAAG 319
Query: 301 NKNVF 305
+
Sbjct: 320 ADEIL 324
>gi|91213326|ref|YP_543312.1| porphobilinogen deaminase [Escherichia coli UTI89]
gi|117626062|ref|YP_859385.1| porphobilinogen deaminase [Escherichia coli APEC O1]
gi|237702812|ref|ZP_04533293.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA]
gi|91074900|gb|ABE09781.1| porphobilinogen deaminase [Escherichia coli UTI89]
gi|115515186|gb|ABJ03261.1| porphobilinogen deaminase [Escherichia coli APEC O1]
gi|226902983|gb|EEH89242.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA]
gi|294490567|gb|ADE89323.1| porphobilinogen deaminase [Escherichia coli IHE3034]
gi|307628866|gb|ADN73170.1| porphobilinogen deaminase [Escherichia coli UM146]
gi|315284723|gb|EFU44168.1| porphobilinogen deaminase [Escherichia coli MS 110-3]
Length = 320
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|117559297|gb|ABK36245.1| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 330
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 79
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + +
Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 139
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 259
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 260 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRLLADG 319
Query: 301 NKNVF 305
+
Sbjct: 320 ADVIL 324
>gi|157156845|ref|YP_001465286.1| porphobilinogen deaminase [Escherichia coli E24377A]
gi|300818726|ref|ZP_07098933.1| porphobilinogen deaminase [Escherichia coli MS 107-1]
gi|300823336|ref|ZP_07103467.1| porphobilinogen deaminase [Escherichia coli MS 119-7]
gi|300921486|ref|ZP_07137834.1| porphobilinogen deaminase [Escherichia coli MS 115-1]
gi|300923304|ref|ZP_07139352.1| porphobilinogen deaminase [Escherichia coli MS 182-1]
gi|301328438|ref|ZP_07221519.1| porphobilinogen deaminase [Escherichia coli MS 78-1]
gi|307313621|ref|ZP_07593241.1| porphobilinogen deaminase [Escherichia coli W]
gi|331679912|ref|ZP_08380575.1| hydroxymethylbilane synthase [Escherichia coli H591]
gi|332282690|ref|ZP_08395103.1| porphobilinogen deaminase [Shigella sp. D9]
gi|157078875|gb|ABV18583.1| porphobilinogen deaminase [Escherichia coli E24377A]
gi|300411603|gb|EFJ94913.1| porphobilinogen deaminase [Escherichia coli MS 115-1]
gi|300420390|gb|EFK03701.1| porphobilinogen deaminase [Escherichia coli MS 182-1]
gi|300524122|gb|EFK45191.1| porphobilinogen deaminase [Escherichia coli MS 119-7]
gi|300528692|gb|EFK49754.1| porphobilinogen deaminase [Escherichia coli MS 107-1]
gi|300845148|gb|EFK72908.1| porphobilinogen deaminase [Escherichia coli MS 78-1]
gi|306906602|gb|EFN37114.1| porphobilinogen deaminase [Escherichia coli W]
gi|315063097|gb|ADT77424.1| hydroxymethylbilane synthase [Escherichia coli W]
gi|324016226|gb|EGB85445.1| porphobilinogen deaminase [Escherichia coli MS 117-3]
gi|331072459|gb|EGI43791.1| hydroxymethylbilane synthase [Escherichia coli H591]
gi|332105042|gb|EGJ08388.1| porphobilinogen deaminase [Shigella sp. D9]
Length = 320
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|218701284|ref|YP_002408913.1| porphobilinogen deaminase [Escherichia coli IAI39]
gi|226740634|sp|B7NTE0|HEM3_ECO7I RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218371270|emb|CAR19104.1| hydroxymethylbilane synthase [Escherichia coli IAI39]
Length = 313
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|194434066|ref|ZP_03066336.1| porphobilinogen deaminase [Shigella dysenteriae 1012]
gi|194417724|gb|EDX33823.1| porphobilinogen deaminase [Shigella dysenteriae 1012]
gi|320176046|gb|EFW51115.1| Porphobilinogen deaminase [Shigella dysenteriae CDC 74-1112]
Length = 318
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|165976435|ref|YP_001652028.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|190150336|ref|YP_001968861.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|303251057|ref|ZP_07337243.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303253601|ref|ZP_07339739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307245920|ref|ZP_07528003.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307248006|ref|ZP_07530035.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307252646|ref|ZP_07534539.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307257056|ref|ZP_07538831.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307259334|ref|ZP_07541061.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307261494|ref|ZP_07543163.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307263677|ref|ZP_07545286.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165876536|gb|ABY69584.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|189915467|gb|ACE61719.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|302647521|gb|EFL77739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302650067|gb|EFL80237.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306853139|gb|EFM85361.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306855404|gb|EFM87578.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306859891|gb|EFM91911.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306864427|gb|EFM96335.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306866570|gb|EFM98431.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868777|gb|EFN00585.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870990|gb|EFN02725.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 314
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L G
Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 245 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGAD 304
Query: 303 NVF 305
+
Sbjct: 305 KIL 307
>gi|238798585|ref|ZP_04642061.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969]
gi|238717541|gb|EEQ09381.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969]
Length = 313
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDVTRQLLAPLNHRDTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G L+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELAGGELWLRALVGAPDGSEIIRGERRGPAENAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|32033974|ref|ZP_00134230.1| COG0181: Porphobilinogen deaminase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 314
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L G
Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 245 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGAD 304
Query: 303 NVF 305
+
Sbjct: 305 KIL 307
>gi|84393564|ref|ZP_00992318.1| porphobilinogen deaminase [Vibrio splendidus 12B01]
gi|84375843|gb|EAP92736.1| porphobilinogen deaminase [Vibrio splendidus 12B01]
Length = 312
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 171/301 (56%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P KGL + RED RD F+S+T ++ +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYNNIDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+
Sbjct: 124 AAVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I ++ G ++ +V DG +G R DA +G A + + +
Sbjct: 244 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDDGAREI 303
Query: 305 F 305
Sbjct: 304 L 304
>gi|193065671|ref|ZP_03046736.1| porphobilinogen deaminase [Escherichia coli E22]
gi|194429243|ref|ZP_03061771.1| porphobilinogen deaminase [Escherichia coli B171]
gi|192926638|gb|EDV81267.1| porphobilinogen deaminase [Escherichia coli E22]
gi|194412755|gb|EDX29049.1| porphobilinogen deaminase [Escherichia coli B171]
gi|320198489|gb|EFW73090.1| Porphobilinogen deaminase [Escherichia coli EC4100B]
Length = 318
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|323964049|gb|EGB59539.1| porphobilinogen deaminase [Escherichia coli M863]
gi|327250654|gb|EGE62360.1| porphobilinogen deaminase [Escherichia coli STEC_7v]
Length = 313
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLNDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|168801133|ref|ZP_02826140.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508]
gi|195938092|ref|ZP_03083474.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4024]
gi|218707439|ref|YP_002414958.1| porphobilinogen deaminase [Escherichia coli UMN026]
gi|254795801|ref|YP_003080638.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14359]
gi|293413246|ref|ZP_06655908.1| porphobilinogen deaminase [Escherichia coli B354]
gi|298383172|ref|ZP_06992766.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302]
gi|331665450|ref|ZP_08366349.1| hydroxymethylbilane synthase [Escherichia coli TA143]
gi|23821693|sp|Q8XAP3|HEM3_ECO57 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740636|sp|B7NFA7|HEM3_ECOLU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189376679|gb|EDU95095.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508]
gi|218434536|emb|CAR15462.1| hydroxymethylbilane synthase [Escherichia coli UMN026]
gi|254595201|gb|ACT74562.1| hydroxymethylbilane synthase [Escherichia coli O157:H7 str.
TW14359]
gi|284923908|emb|CBG37007.1| porphobilinogen deaminase [Escherichia coli 042]
gi|291468194|gb|EFF10691.1| porphobilinogen deaminase [Escherichia coli B354]
gi|298276408|gb|EFI17927.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302]
gi|320639287|gb|EFX08909.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. G5101]
gi|320644672|gb|EFX13722.1| porphobilinogen deaminase [Escherichia coli O157:H- str. 493-89]
gi|320649997|gb|EFX18500.1| porphobilinogen deaminase [Escherichia coli O157:H- str. H 2687]
gi|320655343|gb|EFX23285.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|323974386|gb|EGB69514.1| porphobilinogen deaminase [Escherichia coli TW10509]
gi|331057348|gb|EGI29337.1| hydroxymethylbilane synthase [Escherichia coli TA143]
Length = 313
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|332998254|gb|EGK17856.1| porphobilinogen deaminase [Shigella flexneri K-272]
gi|333013794|gb|EGK33157.1| porphobilinogen deaminase [Shigella flexneri K-227]
Length = 313
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|187733255|ref|YP_001882498.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94]
gi|187430247|gb|ACD09521.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94]
Length = 320
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|206580079|ref|YP_002241132.1| porphobilinogen deaminase [Klebsiella pneumoniae 342]
gi|290513167|ref|ZP_06552529.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55]
gi|226706289|sp|B5XYL1|HEM3_KLEP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|206569137|gb|ACI10913.1| porphobilinogen deaminase [Klebsiella pneumoniae 342]
gi|289774378|gb|EFD82384.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55]
Length = 313
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L
Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|254163746|ref|YP_003046854.1| porphobilinogen deaminase [Escherichia coli B str. REL606]
gi|242379335|emb|CAQ34146.1| hydroxymethylbilane synthase [Escherichia coli BL21(DE3)]
gi|253975647|gb|ACT41318.1| porphobilinogen deaminase [Escherichia coli B str. REL606]
gi|253979803|gb|ACT45473.1| porphobilinogen deaminase [Escherichia coli BL21(DE3)]
gi|323959059|gb|EGB54728.1| porphobilinogen deaminase [Escherichia coli H489]
gi|323969355|gb|EGB64654.1| porphobilinogen deaminase [Escherichia coli TA007]
Length = 313
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|161505549|ref|YP_001572661.1| porphobilinogen deaminase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189028154|sp|A9MJ10|HEM3_SALAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|160866896|gb|ABX23519.1| hypothetical protein SARI_03714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 313
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 159/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLKIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L E P+ GQGAI IE +++ + L+ +NH T V ERA L
Sbjct: 179 LASRIRTALPPEVSLPAVGQGAIGIECRLDDARTHALLAPLNHPQTALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 239 EGGCQVPIGSYAEIFNGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|26250543|ref|NP_756583.1| porphobilinogen deaminase [Escherichia coli CFT073]
gi|110644128|ref|YP_671858.1| porphobilinogen deaminase [Escherichia coli 536]
gi|227888613|ref|ZP_04006418.1| hydroxymethylbilane synthase [Escherichia coli 83972]
gi|300979364|ref|ZP_07174522.1| porphobilinogen deaminase [Escherichia coli MS 200-1]
gi|300985714|ref|ZP_07177569.1| porphobilinogen deaminase [Escherichia coli MS 45-1]
gi|301047316|ref|ZP_07194402.1| porphobilinogen deaminase [Escherichia coli MS 185-1]
gi|26110973|gb|AAN83157.1|AE016769_272 Porphobilinogen deaminase [Escherichia coli CFT073]
gi|110345720|gb|ABG71957.1| porphobilinogen deaminase [Escherichia coli 536]
gi|227834452|gb|EEJ44918.1| hydroxymethylbilane synthase [Escherichia coli 83972]
gi|300300835|gb|EFJ57220.1| porphobilinogen deaminase [Escherichia coli MS 185-1]
gi|300308036|gb|EFJ62556.1| porphobilinogen deaminase [Escherichia coli MS 200-1]
gi|300407988|gb|EFJ91526.1| porphobilinogen deaminase [Escherichia coli MS 45-1]
gi|307555929|gb|ADN48704.1| porphobilinogen deaminase [Escherichia coli ABU 83972]
gi|315293155|gb|EFU52507.1| porphobilinogen deaminase [Escherichia coli MS 153-1]
gi|324007476|gb|EGB76695.1| porphobilinogen deaminase [Escherichia coli MS 57-2]
gi|324014708|gb|EGB83927.1| porphobilinogen deaminase [Escherichia coli MS 60-1]
Length = 320
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|162419364|ref|YP_001605129.1| porphobilinogen deaminase [Yersinia pestis Angola]
gi|238059008|sp|A9R8K0|HEM3_YERPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|162352179|gb|ABX86127.1| porphobilinogen deaminase [Yersinia pestis Angola]
Length = 313
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A + +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSLG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|49176416|ref|YP_026260.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|89110215|ref|AP_003995.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
W3110]
gi|170083288|ref|YP_001732608.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238902882|ref|YP_002928678.1| hydroxymethylbilane synthase [Escherichia coli BW2952]
gi|256026151|ref|ZP_05440016.1| porphobilinogen deaminase [Escherichia sp. 4_1_40B]
gi|312971913|ref|ZP_07786087.1| porphobilinogen deaminase [Escherichia coli 1827-70]
gi|2506504|sp|P06983|HEM3_ECOLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229836108|sp|B1XAH2|HEM3_ECODH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|259647795|sp|C4ZZ69|HEM3_ECOBW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4388845|pdb|2YPN|A Chain A, Hydroxymethylbilane Synthase
gi|28373294|pdb|1GTK|A Chain A, Time-Resolved And Static-Ensemble Structural Chemistry Of
Hydroxymethylbilane Synthase
gi|41666|emb|CAA31132.1| unnamed protein product [Escherichia coli]
gi|48994974|gb|AAT48218.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|85676246|dbj|BAE77496.1| hydroxymethylbilane synthase [Escherichia coli str. K12 substr.
W3110]
gi|169891123|gb|ACB04830.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238861470|gb|ACR63468.1| hydroxymethylbilane synthase [Escherichia coli BW2952]
gi|309704240|emb|CBJ03588.1| porphobilinogen deaminase [Escherichia coli ETEC H10407]
gi|310334290|gb|EFQ00495.1| porphobilinogen deaminase [Escherichia coli 1827-70]
gi|315618498|gb|EFU99084.1| porphobilinogen deaminase [Escherichia coli 3431]
gi|323934193|gb|EGB30624.1| porphobilinogen deaminase [Escherichia coli E1520]
gi|323938941|gb|EGB35160.1| porphobilinogen deaminase [Escherichia coli E482]
gi|332345783|gb|AEE59117.1| porphobilinogen deaminase HemC [Escherichia coli UMNK88]
Length = 313
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|315634981|ref|ZP_07890262.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393]
gi|315476243|gb|EFU66994.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393]
Length = 346
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 165/306 (53%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK +I TR SPLAL A ++ L ++ P +I ++ + TKGD I + L +IGG
Sbjct: 39 MFKKTLKIATRQSPLALWQANFVKARLQQLY--PDLSIELVTMVTKGDVILDSPLAKIGG 96
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+T ++L +
Sbjct: 97 KGLFVKELENALLNNEADIAVHSMKDVPMQFPEGLGLSVICKREDPRDAFVSNTYRTLAE 156
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 157 LPPGAIVGTSSLRRQCQLKALRPDLEIRSLRGNVGTRLSKLDNGDFDAIILASAGLIRLG 216
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + +E P+ GQGA+ IE N+ + ++L+ + +T V ERA L
Sbjct: 217 LADRITSFIEVEQSLPAAGQGAVGIECRTNDEQVKQLLAPLADVETTYCVLAERAMNNRL 276
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + S L +V + DG +A +G A+ +
Sbjct: 277 QGGCQVPIGGYAVLRESMLNLRALVGSVDGSTIIRAEGQSAVENAEILGVQIAEQLLAQG 336
Query: 301 NKNVFN 306
+
Sbjct: 337 ADKILQ 342
>gi|237727921|ref|ZP_04558402.1| porphobilinogen deaminase [Citrobacter sp. 30_2]
gi|226910370|gb|EEH96288.1| porphobilinogen deaminase [Citrobacter sp. 30_2]
Length = 318
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL +
Sbjct: 64 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNSLDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E ++ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L
Sbjct: 184 LESRVRTALPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAEIIDGEIWLRALVGAPDGSQMVCGERRGATQDAEQMGISLAEELLENG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 ARAIL 308
>gi|191174267|ref|ZP_03035776.1| porphobilinogen deaminase [Escherichia coli F11]
gi|190905450|gb|EDV65080.1| porphobilinogen deaminase [Escherichia coli F11]
Length = 318
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|110807507|ref|YP_691027.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401]
gi|110617055|gb|ABF05722.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401]
gi|281603194|gb|ADA76178.1| Porphobilinogen deaminase [Shigella flexneri 2002017]
Length = 320
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|77359075|ref|YP_338650.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis TAC125]
gi|76873986|emb|CAI85207.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Pseudoalteromonas haloplanktis TAC125]
Length = 312
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 168/307 (54%), Gaps = 4/307 (1%)
Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + RI TR S LAL A ++ L H P + ++P+ST+GD I + L +I
Sbjct: 1 MTQTTNIVRIATRKSALALWQAEFVKAQLEHYH--PGILVELVPMSTQGDIILDTPLAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E+ ++ G D AVHS KDMP + +GL + RED RD F+S+ ++
Sbjct: 59 GGKGLFVKELEQAMLEGLADMAVHSMKDMPVEFPEGLTLHTICEREDPRDAFVSNNFANI 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R
Sbjct: 119 DELPQGAIVGTSSLRRQCQIRASRPDLKIHDLRGNVNTRLAKLDSGQYDAIILAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L+ + I+ + E P+ GQGA+ IE ++ + L+ + H +T VN ERA
Sbjct: 179 LEMKDRIRAYIEPEVSLPANGQGAVGIECRTDDEAIKALLAPLEHSETRIRVNAERAMNR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I +A G ++ G+V A DG +G+ DA +G + A+ +
Sbjct: 239 HLEGGCQVPIGAYALVNGDQVHLRGLVGAIDGSEILRDEVSGHVNDAEKLGVELAKMLLA 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 QGADRIL 305
>gi|219871198|ref|YP_002475573.1| porphobilinogen deaminase [Haemophilus parasuis SH0165]
gi|219691402|gb|ACL32625.1| porphobilinogen deaminase [Haemophilus parasuis SH0165]
Length = 309
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 166/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 2 KEILRIATRQSPLALWQANFVKDALEQ--RFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L G
Sbjct: 180 ERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA G + +V + DG S GN +A +G + A+ +
Sbjct: 240 GCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGAD 299
Query: 303 NVF 305
++
Sbjct: 300 HIL 302
>gi|197287145|ref|YP_002153017.1| porphobilinogen deaminase [Proteus mirabilis HI4320]
gi|238058999|sp|B4F1X3|HEM3_PROMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194684632|emb|CAR46538.1| porphobilinogen deaminase [Proteus mirabilis HI4320]
Length = 313
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V + DG+ R + DA G A+ +
Sbjct: 239 EGGCQVPIGSYAIWQNGKIWLRALVGSPDGETILRGERLVSPEDAEQAGISLAEELLDKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|312969469|ref|ZP_07783671.1| porphobilinogen deaminase [Escherichia coli 2362-75]
gi|312286016|gb|EFR13934.1| porphobilinogen deaminase [Escherichia coli 2362-75]
Length = 313
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|238793582|ref|ZP_04637206.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909]
gi|238727172|gb|EEQ18702.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909]
Length = 313
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S + D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICERDDPRDAFVSPHFAHIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LASRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRVTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G+TL+ G+V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRGLVGAPDGSEIIRGERRGPAENAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|51594540|ref|YP_068731.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953]
gi|186893538|ref|YP_001870650.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+]
gi|61213379|sp|Q66G00|HEM3_YERPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059007|sp|B2K065|HEM3_YERPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51587822|emb|CAH19424.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953]
gi|186696564|gb|ACC87193.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+]
Length = 313
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + A RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LETRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|108806170|ref|YP_650086.1| porphobilinogen deaminase [Yersinia pestis Antiqua]
gi|108810280|ref|YP_646047.1| porphobilinogen deaminase [Yersinia pestis Nepal516]
gi|145600717|ref|YP_001164793.1| porphobilinogen deaminase [Yersinia pestis Pestoides F]
gi|153949991|ref|YP_001399195.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758]
gi|153997095|ref|ZP_02022228.1| porphobilinogen deaminase [Yersinia pestis CA88-4125]
gi|161484901|ref|NP_667719.2| porphobilinogen deaminase [Yersinia pestis KIM 10]
gi|161511325|ref|NP_994488.2| porphobilinogen deaminase [Yersinia pestis biovar Microtus str.
91001]
gi|165926233|ref|ZP_02222065.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939151|ref|ZP_02227702.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011678|ref|ZP_02232576.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213633|ref|ZP_02239668.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401822|ref|ZP_02307310.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421084|ref|ZP_02312837.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426299|ref|ZP_02318052.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470637|ref|ZP_02335341.1| porphobilinogen deaminase [Yersinia pestis FV-1]
gi|218930852|ref|YP_002348727.1| porphobilinogen deaminase [Yersinia pestis CO92]
gi|229837182|ref|ZP_04457347.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A]
gi|229839542|ref|ZP_04459701.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229900105|ref|ZP_04515242.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900449|ref|ZP_04515578.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|270488804|ref|ZP_06205878.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27]
gi|294505512|ref|YP_003569574.1| porphobilinogen deaminase [Yersinia pestis Z176003]
gi|17380441|sp|P46355|HEM3_YERPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|122979815|sp|Q1CBN1|HEM3_YERPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123373560|sp|Q1CNI3|HEM3_YERPN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158514109|sp|A4TRA8|HEM3_YERPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167008820|sp|A7FD67|HEM3_YERP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108773928|gb|ABG16447.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|108778083|gb|ABG12141.1| hydroxymethylbilane synthase [Yersinia pestis Antiqua]
gi|115349463|emb|CAL22436.1| porphobilinogen deaminase [Yersinia pestis CO92]
gi|145212413|gb|ABP41820.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides F]
gi|149289401|gb|EDM39479.1| porphobilinogen deaminase [Yersinia pestis CA88-4125]
gi|152961486|gb|ABS48947.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758]
gi|165912924|gb|EDR31550.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921757|gb|EDR38954.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989447|gb|EDR41748.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205306|gb|EDR49786.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961213|gb|EDR57234.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048715|gb|EDR60123.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054818|gb|EDR64622.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682468|gb|EEO78555.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|229686885|gb|EEO78964.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695908|gb|EEO85955.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706125|gb|EEO92134.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A]
gi|262363578|gb|ACY60299.1| porphobilinogen deaminase [Yersinia pestis D106004]
gi|262367506|gb|ACY64063.1| porphobilinogen deaminase [Yersinia pestis D182038]
gi|270337308|gb|EFA48085.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27]
gi|294355971|gb|ADE66312.1| porphobilinogen deaminase [Yersinia pestis Z176003]
gi|320013550|gb|ADV97121.1| hydroxymethylbilane synthase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 313
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|74314316|ref|YP_312735.1| porphobilinogen deaminase [Shigella sonnei Ss046]
gi|73857793|gb|AAZ90500.1| porphobilinogen deaminase [Shigella sonnei Ss046]
Length = 320
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|331649629|ref|ZP_08350711.1| hydroxymethylbilane synthase [Escherichia coli M605]
gi|331041499|gb|EGI13647.1| hydroxymethylbilane synthase [Escherichia coli M605]
Length = 320
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|271502386|ref|YP_003335412.1| porphobilinogen deaminase [Dickeya dadantii Ech586]
gi|270345941|gb|ACZ78706.1| porphobilinogen deaminase [Dickeya dadantii Ech586]
Length = 312
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG
Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L D
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNNYATLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPEGACVGTSSLRRQCQLRAHRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L
Sbjct: 179 LENRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TLY +V A DG R G R DA +G A +
Sbjct: 239 EGGCQVPIGSYAELQDDTLYLRALVGAPDGSRIIYAERRGPRQDAEALGIGLADELLERG 298
Query: 301 NKNVFN 306
+++
Sbjct: 299 ARDILQ 304
>gi|148204|gb|AAA67601.1| porphobilinogen deaminase [Escherichia coli str. K-12 substr.
MG1655]
Length = 320
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDXPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLGERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAGLPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGRPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|323161134|gb|EFZ47052.1| porphobilinogen deaminase [Escherichia coli E128010]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTHELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|162139476|ref|YP_855002.2| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 315
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + +
Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 245 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRLLADG 304
Query: 301 NKNVF 305
+
Sbjct: 305 ADVIL 309
>gi|330908104|gb|EGH36623.1| porphobilinogen deaminase [Escherichia coli AA86]
Length = 318
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|331660148|ref|ZP_08361084.1| hydroxymethylbilane synthase [Escherichia coli TA206]
gi|320185465|gb|EFW60234.1| Porphobilinogen deaminase [Shigella flexneri CDC 796-83]
gi|331052716|gb|EGI24751.1| hydroxymethylbilane synthase [Escherichia coli TA206]
gi|332084681|gb|EGI89869.1| porphobilinogen deaminase [Shigella boydii 5216-82]
gi|332084931|gb|EGI90113.1| porphobilinogen deaminase [Shigella dysenteriae 155-74]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|167855158|ref|ZP_02477929.1| porphobilinogen deaminase [Haemophilus parasuis 29755]
gi|167853703|gb|EDS24946.1| porphobilinogen deaminase [Haemophilus parasuis 29755]
Length = 309
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 166/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 2 KEILRIATRQSPLALWQANFVKDALEQ--RFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L
Sbjct: 60 LFVKELELALLKNRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L G
Sbjct: 180 ERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA G + +V + DG S GN +A +G + A+ +
Sbjct: 240 GCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGAD 299
Query: 303 NVF 305
++
Sbjct: 300 HIL 302
>gi|293407432|ref|ZP_06651352.1| porphobilinogen deaminase [Escherichia coli FVEC1412]
gi|291425543|gb|EFE98581.1| porphobilinogen deaminase [Escherichia coli FVEC1412]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESHIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|194469126|ref|ZP_03075110.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205358767|ref|ZP_02658924.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194455490|gb|EDX44329.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332052|gb|EDZ18816.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDV 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 179 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 239 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|126208484|ref|YP_001053709.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae L20]
gi|126097276|gb|ABN74104.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 309
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 2 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L G
Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 240 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGAD 299
Query: 303 NVF 305
+
Sbjct: 300 KIL 302
>gi|304398148|ref|ZP_07380023.1| porphobilinogen deaminase [Pantoea sp. aB]
gi|304354434|gb|EFM18806.1| porphobilinogen deaminase [Pantoea sp. aB]
Length = 317
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+
Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 123 LPQGAIVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ + E P+ GQGA+ IE +++ +L++ +NH+DT V ERA L
Sbjct: 183 LEDRIRQAMPAEVSLPAVGQGAVGIECRLDDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G+ L+ G+V A DG++ R G R A +G A +
Sbjct: 243 EGGCQVPIGSFAVLEGNDLWLRGMVGAPDGRVMVSGERRGPRAQAEQMGISLADELLNGG 302
Query: 301 NKNVF 305
+ +
Sbjct: 303 AREIL 307
>gi|309796256|ref|ZP_07690666.1| porphobilinogen deaminase [Escherichia coli MS 145-7]
gi|308120138|gb|EFO57400.1| porphobilinogen deaminase [Escherichia coli MS 145-7]
Length = 320
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|218560868|ref|YP_002393781.1| porphobilinogen deaminase [Escherichia coli S88]
gi|218692081|ref|YP_002400293.1| porphobilinogen deaminase [Escherichia coli ED1a]
gi|226740633|sp|B7MH66|HEM3_ECO45 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800250|sp|B7N295|HEM3_ECO81 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218367637|emb|CAR05420.1| hydroxymethylbilane synthase [Escherichia coli S88]
gi|218429645|emb|CAR10466.1| hydroxymethylbilane synthase [Escherichia coli ED1a]
gi|323949314|gb|EGB45204.1| porphobilinogen deaminase [Escherichia coli H252]
gi|323954009|gb|EGB49807.1| porphobilinogen deaminase [Escherichia coli H263]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|209921277|ref|YP_002295361.1| porphobilinogen deaminase [Escherichia coli SE11]
gi|218556364|ref|YP_002389278.1| porphobilinogen deaminase [Escherichia coli IAI1]
gi|218697519|ref|YP_002405186.1| porphobilinogen deaminase [Escherichia coli 55989]
gi|256021454|ref|ZP_05435319.1| porphobilinogen deaminase [Shigella sp. D9]
gi|260846422|ref|YP_003224200.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str.
12009]
gi|260857792|ref|YP_003231683.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str.
11368]
gi|260870527|ref|YP_003236929.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str.
11128]
gi|293417268|ref|ZP_06659893.1| porphobilinogen deaminase [Escherichia coli B185]
gi|293468119|ref|ZP_06664531.1| porphobilinogen deaminase [Escherichia coli B088]
gi|331670648|ref|ZP_08371485.1| hydroxymethylbilane synthase [Escherichia coli TA271]
gi|226706285|sp|B6I4E0|HEM3_ECOSE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740635|sp|B7M603|HEM3_ECO8A RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800249|sp|B7L959|HEM3_ECO55 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|209914536|dbj|BAG79610.1| porphobilinogen deaminase [Escherichia coli SE11]
gi|218354251|emb|CAV00923.1| hydroxymethylbilane synthase [Escherichia coli 55989]
gi|218363133|emb|CAR00774.1| hydroxymethylbilane synthase [Escherichia coli IAI1]
gi|257756441|dbj|BAI27943.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str.
11368]
gi|257761569|dbj|BAI33066.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str.
12009]
gi|257766883|dbj|BAI38378.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str.
11128]
gi|291321497|gb|EFE60935.1| porphobilinogen deaminase [Escherichia coli B088]
gi|291431036|gb|EFF04031.1| porphobilinogen deaminase [Escherichia coli B185]
gi|323155206|gb|EFZ41390.1| porphobilinogen deaminase [Escherichia coli EPECa14]
gi|323182576|gb|EFZ67980.1| porphobilinogen deaminase [Escherichia coli 1357]
gi|323380839|gb|ADX53107.1| porphobilinogen deaminase [Escherichia coli KO11]
gi|323943796|gb|EGB39891.1| porphobilinogen deaminase [Escherichia coli H120]
gi|324115735|gb|EGC09670.1| porphobilinogen deaminase [Escherichia coli E1167]
gi|331062121|gb|EGI34043.1| hydroxymethylbilane synthase [Escherichia coli TA271]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|283834568|ref|ZP_06354309.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220]
gi|291069698|gb|EFE07807.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ +L D
Sbjct: 59 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAKRRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E ++ L E P+ GQGA+ IE +++ + + L+ +NHE+T V ERA L
Sbjct: 179 LESRVRTALPPEVSLPAVGQGAVGIECRLDDMRTRALLAPLNHEETALRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELINGEIWLRALVGAPDGSQMVCGERRGAVQDAEQMGISLAEELLENG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|82779017|ref|YP_405366.1| porphobilinogen deaminase [Shigella dysenteriae Sd197]
gi|81243165|gb|ABB63875.1| porphobilinogen deaminase [Shigella dysenteriae Sd197]
Length = 320
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLVALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|331685522|ref|ZP_08386106.1| hydroxymethylbilane synthase [Escherichia coli H299]
gi|331077223|gb|EGI48437.1| hydroxymethylbilane synthase [Escherichia coli H299]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|259906881|ref|YP_002647237.1| porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96]
gi|224962503|emb|CAX53958.1| Porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96]
gi|283476674|emb|CAY72503.1| hemC [Erwinia pyrifoliae DSM 12163]
Length = 313
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 172/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE + + L+ +NH++T V+ ERA L
Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLEDMHTIGLLAALNHDETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ G+V + DG R G+R DA +G A+ +
Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|300721444|ref|YP_003710719.1| hydroxymethylbilane synthase [Xenorhabdus nematophila ATCC 19061]
gi|297627936|emb|CBJ88482.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus nematophila ATCC 19061]
Length = 313
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MTMKTIRIATRQSPLAMWQAHYVQKQLQHFH--PELKVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + R+D RD F+S SL D
Sbjct: 59 KGLFVKELELALLEKRADIAVHSMKDVPVEFPNGLGLVTICERDDPRDAFVSVKYASLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + R D+ + D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPTGSVVGTSSLRRQCQLRQLRPDLVIRDLRGNVGTRLSKLDNGDYDAIILATAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L
Sbjct: 179 LEERIRMPLAPELLLPAVGQGAVGIECRLDDQQTRELLAPLNHARTEICVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V A DG + R + +A G A+ +
Sbjct: 239 EGGCQVPIGSYAIWQEDKIWLRALVGAPDGTVSVRGERVVSPEEARQAGVALAEELLEKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARQIL 303
>gi|301029020|ref|ZP_07192174.1| porphobilinogen deaminase [Escherichia coli MS 196-1]
gi|299878014|gb|EFI86225.1| porphobilinogen deaminase [Escherichia coli MS 196-1]
Length = 320
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSDNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|260914569|ref|ZP_05921037.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325]
gi|260631360|gb|EEX49543.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325]
Length = 311
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I TR SPLAL A + L + P N+V++P+ TKGD I + L +IGG
Sbjct: 1 MTNNTLKIATRQSPLALWQANYVKQRLESFY--PDLNVVLVPMVTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+SGE D AVHS KD+P + +GL +S PRED D +S+T ++L++
Sbjct: 59 KGLFVKELEIALLSGEADIAVHSMKDVPMQFPEGLGLSVICPREDPHDALVSNTYRTLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 119 LPQGAIVGTSSLRRQCQLKQLRPDLKIESLRGNVGTRLSKLDCGDYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++I+D P+ GQGA+ IE N+ + Q+L+ + +T D V ERA L
Sbjct: 179 LTERIASFIDIQDMLPAAGQGAVGIECRKNDSRVQQLLAPLADIETTDCVLAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + +Y G+V A DG +A N+G A+ +
Sbjct: 239 QGGCQVPIAGYAIIENDQIYLRGLVGALDGSAILRAEAKSAVKNAENLGIQVAEMLLQQG 298
Query: 301 NKNVF 305
N+
Sbjct: 299 AGNIL 303
>gi|306815158|ref|ZP_07449311.1| porphobilinogen deaminase [Escherichia coli NC101]
gi|34222567|sp|Q8FBP1|HEM3_ECOL6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222035503|emb|CAP78248.1| Porphobilinogen deaminase [Escherichia coli LF82]
gi|305851527|gb|EFM51981.1| porphobilinogen deaminase [Escherichia coli NC101]
gi|312948358|gb|ADR29185.1| porphobilinogen deaminase [Escherichia coli O83:H1 str. NRG 857C]
Length = 313
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|30064902|ref|NP_839073.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T]
gi|56480439|ref|NP_709607.2| porphobilinogen deaminase [Shigella flexneri 2a str. 301]
gi|61213578|sp|Q83PH4|HEM3_SHIFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30043162|gb|AAP18884.1| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella
flexneri 2a str. 2457T]
gi|56383990|gb|AAN45314.2| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella
flexneri 2a str. 301]
gi|313647157|gb|EFS11612.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T]
gi|332751946|gb|EGJ82341.1| porphobilinogen deaminase [Shigella flexneri 2747-71]
gi|332996995|gb|EGK16613.1| porphobilinogen deaminase [Shigella flexneri VA-6]
gi|332997894|gb|EGK17501.1| porphobilinogen deaminase [Shigella flexneri K-218]
gi|333019501|gb|EGK38782.1| porphobilinogen deaminase [Shigella flexneri K-304]
Length = 313
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|2495175|sp|Q59684|HEM3_PROMI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|726359|gb|AAC44329.1| porphobilinogen deaminase [Proteus mirabilis]
Length = 313
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V A DGK R + DA G A+ +
Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGAPDGKTILRGERLVSPEDAEQAGISLAEELLDKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|260596029|ref|YP_003208600.1| porphobilinogen deaminase [Cronobacter turicensis z3032]
gi|260215206|emb|CBA27057.1| Porphobilinogen deaminase [Cronobacter turicensis z3032]
Length = 313
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL +
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYKSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ S++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+
Sbjct: 119 MPAGSIVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L
Sbjct: 179 LDARITSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A K L+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSRIVRGERRGAPQDASQLGVSLAEELLNHG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|292486675|ref|YP_003529545.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430]
gi|292897912|ref|YP_003537281.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946]
gi|291197760|emb|CBJ44855.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946]
gi|291552092|emb|CBA19129.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430]
gi|312170741|emb|CBX79003.1| Porphobilinogen deaminase [Erwinia amylovora ATCC BAA-2158]
Length = 313
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 173/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PRLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELENAMLSGHADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNHYASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPAGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ + L+ +NH+DT V+ ERA L
Sbjct: 179 LSGRIRQVMPAEESLPAVGQGAVGIECRLDDMRTIGLLAALNHDDTACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ G+V + DG R G+R DA +G A+ +
Sbjct: 239 EGGCQVPIGSYALLEGDRLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|170026227|ref|YP_001722732.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII]
gi|238059009|sp|B1JPE6|HEM3_YERPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169752761|gb|ACA70279.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII]
Length = 313
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYTHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDGHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|329297028|ref|ZP_08254364.1| porphobilinogen deaminase [Plautia stali symbiont]
Length = 313
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLNKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELMPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ S+
Sbjct: 59 KGLFVKELELAMLENRADMAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNHYSSIDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQISARRPDLVIHSLRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L E P+ GQGA+ IE +++ L++ +NH DT V ERA L
Sbjct: 179 LEDRIRQALPAEFSLPAVGQGAVGIECRLDDQPLITLLQALNHSDTAVCVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA + L+ G+V A DG R G R A +G A+ +
Sbjct: 239 EGGCQVPIGSFAVLEDDQLWLRGLVGAPDGSQMVVGERRGPREQAEQMGISLAEELLDGG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|323167552|gb|EFZ53258.1| porphobilinogen deaminase [Shigella sonnei 53G]
Length = 313
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|239995985|ref|ZP_04716509.1| porphobilinogen deaminase [Alteromonas macleodii ATCC 27126]
Length = 312
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGK
Sbjct: 6 TTRTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L
Sbjct: 64 GLFIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDAL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 124 PQGAVVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLEM 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ L + P+ GQGA+ IE ++ + +L++ +NH DT V ERA L+
Sbjct: 184 ESRIRMPLPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLE 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I FA G L G+V DG S +R A +IG + A+ +
Sbjct: 244 GGCQVPIGSFATLDGDVLTLTGMVGKPDGSELLFASATASREKAADIGVEVAESLLEQGA 303
Query: 302 KNVF 305
+
Sbjct: 304 GEIL 307
>gi|281180853|dbj|BAI57183.1| porphobilinogen deaminase [Escherichia coli SE15]
Length = 313
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|149908497|ref|ZP_01897159.1| porphobilinogen deaminase [Moritella sp. PE36]
gi|149808331|gb|EDM68268.1| porphobilinogen deaminase [Moritella sp. PE36]
Length = 312
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + +IP+ TKGD I + L ++GG
Sbjct: 1 MATETLRIATRKSPLAMWQAEYVKARLEAIHQ--NLTVELIPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+T + +++
Sbjct: 59 KGLFVKELEVAILENRADIAVHSMKDVPVEFPEGLDLEVICEREDPRDAFVSNTYRQIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ ++D RG + TRLNKL+N AI+LA AG+KRL
Sbjct: 119 LPPGAIVGTCSLRRQCQLSEARPDLKIMDLRGNVNTRLNKLDNKDYDAIILAAAGLKRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E P+ GQGA+ IE +++ + + L+ +NH T D V ERA L
Sbjct: 179 MEYRIASYIEPEQSLPAVGQGAVGIECRIDDERVKALLAPLNHALTSDRVLAERAMNLAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G L+ G+V DG G+R +A +G + A +
Sbjct: 239 EGGCQVPIGSYAIIDGDELWLRGLVGKPDGTEVIRAEIRGDRKNARQLGLELADKLLAQG 298
Query: 301 NKNVF 305
K +
Sbjct: 299 AKEIL 303
>gi|191166073|ref|ZP_03027908.1| porphobilinogen deaminase [Escherichia coli B7A]
gi|190903849|gb|EDV63563.1| porphobilinogen deaminase [Escherichia coli B7A]
Length = 313
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|307250258|ref|ZP_07532212.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857699|gb|EFM89801.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 314
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 164/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + +L +IGGKG
Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTSLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L G
Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GF+ G+ + +V A DG S +R +A +G A+ +
Sbjct: 245 GCQVPIGGFSTLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGAD 304
Query: 303 NVF 305
+
Sbjct: 305 KIL 307
>gi|238892405|ref|YP_002917139.1| porphobilinogen deaminase [Klebsiella pneumoniae NTUH-K2044]
gi|329997497|ref|ZP_08302799.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3]
gi|238544721|dbj|BAH61072.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328539065|gb|EGF65104.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3]
Length = 318
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A K L+ +V A DG R G A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|88861269|ref|ZP_01135901.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2]
gi|88816750|gb|EAR26573.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2]
Length = 312
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR S LAL A ++ L H P + ++P+ST+GD+I + L +IGGK
Sbjct: 4 SSPTLRIATRKSALALWQAEFVKAQLEIHH--PGIQVELVPMSTQGDKILDTPLAKIGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E+ ++ G D AVHS KD+P + +GL+++ RED RD F+S+ +++++L
Sbjct: 62 GLFVKELEQAMLEGRADIAVHSMKDVPVEFPEGLELNTICEREDPRDAFVSNRFKTIEEL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 122 PQGAVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLEM 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + E P+ GQGA+ IE ++ ++L+ + H +T V ERA L+
Sbjct: 182 PQRIASFIEPEQSLPANGQGAVGIECRSDDITTKQLLAALEHTETRIRVLAERAMNRRLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I FA G + G+V A DG G DA +G + A +
Sbjct: 242 GGCQVPIGAFAQVSGEHITIRGLVGAIDGSEILRDQVQGLCADAEQLGVELANKLLAQGA 301
Query: 302 KNVFN 306
+
Sbjct: 302 DKILQ 306
>gi|157834325|pdb|1YPN|A Chain A, Reduced Form Hydroxymethylbilane Synthase (K59q Mutant)
Crystal Structure After 2 Hours In A Flow Cell
Determined By Time-Resolved Laue Diffraction
Length = 313
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+GLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 QGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|157144433|ref|YP_001451752.1| porphobilinogen deaminase [Citrobacter koseri ATCC BAA-895]
gi|157081638|gb|ABV11316.1| hypothetical protein CKO_00147 [Citrobacter koseri ATCC BAA-895]
Length = 318
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +L+ H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALIAQH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L +
Sbjct: 64 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNQYNNLDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L
Sbjct: 184 LTSRIRTALPPEISLPAVGQGAVGIECRLDDARTQALLAPLNHEETALRVKAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAEIIDGEVWLRALVGAPDGSQMIRGERRGLPQDAAQMGISLAEELLANG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 ARAIL 308
>gi|119947244|ref|YP_944924.1| porphobilinogen deaminase [Psychromonas ingrahamii 37]
gi|166217780|sp|A1T0R0|HEM3_PSYIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119865848|gb|ABM05325.1| porphobilinogen deaminase [Psychromonas ingrahamii 37]
Length = 310
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A +S L+ H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MTAQKIRIATRHSPLAMWQANFIKSELLKYH--PNLIVELLPMKTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL ++ RED D F+S+ + L +
Sbjct: 59 KGLFVKELEVAILEGRADIAVHSIKDVPVDFPEGLGLTTICKREDPHDAFVSNHYKQLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ +L R DI + + RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 119 LPEGAIVGTCSLRRQCQILALRPDIIIKNLRGNVNTRLRKLDEGEYDAIILAAAGLMRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E P+ GQGA+ IE +++ + L+K + +T + ERA +L
Sbjct: 179 MQHRITSLIAPEVSLPAVGQGAVGIECRLDDEQTITLLKPLEDPETRIRITAERAMNLKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I FA + L+ G+V + DGK G++ DA +G A+ +
Sbjct: 239 QGGCQVPIGSFAILENEQLFLRGLVGSVDGKQIIRKEITGHQNDAQQLGITLAEQLLACG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEEIL 303
>gi|145300736|ref|YP_001143577.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142853508|gb|ABO91829.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 315
Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++
Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFSQIEA 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHTLLAPLEHAETRIRVLTERAMNRAL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 245 QGGCQVPIGAYALVQGDEVWLRGLVGSPDGSQVIHDEIRGPLADGEALGHTLAQRLLAAG 304
Query: 301 NKNVF 305
+
Sbjct: 305 ADVIL 309
>gi|156935870|ref|YP_001439786.1| porphobilinogen deaminase [Cronobacter sakazakii ATCC BAA-894]
gi|166217766|sp|A7MQJ1|HEM3_ENTS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|156534124|gb|ABU78950.1| hypothetical protein ESA_03753 [Cronobacter sakazakii ATCC BAA-894]
Length = 313
Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL +
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ S++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+
Sbjct: 119 MPAGSIVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L
Sbjct: 179 LDARITSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + L+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELRDGELWLRALVGAPDGSRIVRGERRGAPEDARQLGISLAEELLNHG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|290477117|ref|YP_003470030.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus bovienii SS-2004]
gi|289176463|emb|CBJ83272.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus bovienii SS-2004]
Length = 311
Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 112/302 (37%), Positives = 165/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR SPLA+ A + L H P + +IP+ T+GD I + L ++GGKGL
Sbjct: 2 KIIRIATRQSPLAMWQAQYVQKQLEQFH--PELKVELIPMVTRGDVILDTPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + GL + R D RD F+S SL +L +
Sbjct: 60 FVKELELALLENRADIAVHSMKDVPVEFPDGLGLVTICERGDPRDAFVSVKYTSLDELPI 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL E
Sbjct: 120 GSIVGTSSLRRQCQLRQLRPDLVVRDLRGNVGTRLGKLDNGDYDAIILAAAGLKRLGLED 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G
Sbjct: 180 RIRMPLEPELLLPAVGQGAVGIECRLDDKQTRELLAPLNHTGTEICVLAERAMNTHLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I +A +G+ ++ +V A DG I + + +A G + A+ + +
Sbjct: 240 CQVPIGSYAIWQGNNIWLRALVGAPDGSITVRGEKTVSPEEARRAGVELAEELLEKGARQ 299
Query: 304 VF 305
+
Sbjct: 300 IL 301
>gi|24375795|ref|NP_719838.1| porphobilinogen deaminase [Shewanella oneidensis MR-1]
gi|39931562|sp|Q8E9H0|HEM3_SHEON RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|24350743|gb|AAN57282.1|AE015863_11 porphobilinogen deaminase [Shewanella oneidensis MR-1]
Length = 310
Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|157833452|pdb|1PDA|A Chain A, Structure Of Porphobilinogen Deaminase Reveals A Flexible
Multidomain Polymerase With A Single Catalytic Site
gi|41664|emb|CAA27813.1| unnamed protein product [Escherichia coli]
Length = 313
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G+C+ I +A ++ G+V A DG R G DA +G A+ +
Sbjct: 239 EGACQVPIGSYAELIDGEIWLRGLVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|331005642|ref|ZP_08329011.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989]
gi|330420567|gb|EGG94864.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989]
Length = 324
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR SPLAL A ++ L +H P + ++P++++GD I + L ++GGKG
Sbjct: 13 KNTITIATRKSPLALWQAEYVKARLEALH--PEVTVELLPMTSRGDHILDVPLAKVGGKG 70
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L++GE D AVHS KD+P + +GL +S RED RD F+S S DL
Sbjct: 71 LFVKELEHALLNGEADIAVHSMKDVPMEFPEGLGLSVICEREDPRDAFVSEKYASFADLP 130
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ LL R D+ + RG + TRL KL+ + AI+LA AG+ RLK
Sbjct: 131 QGAVVGTSSLRRQCQLLEQRPDLQITFLRGNVNTRLRKLDEGEYDAIILAAAGLMRLKMA 190
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L E P+ GQGA+ IE ++ + + + +N T + V ERA L+G
Sbjct: 191 DRITEYLTPELCLPAGGQGAVGIECRDDDEQVKTWLAPLNDPITHECVAAERAMNRRLEG 250
Query: 243 SCKSAIAGFAY--CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ IA +A G L+ G+V + DGKI E G A ++G A+ +
Sbjct: 251 GCQVPIASYAIHSADGKQLWLRGLVGSPDGKIMLEDEVTGAPDQADDLGVKLAERLLDKG 310
Query: 301 NKNVF 305
+ +
Sbjct: 311 AETIL 315
>gi|152972793|ref|YP_001337939.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|166217775|sp|A6TGI8|HEM3_KLEP7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150957642|gb|ABR79672.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 313
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A K L+ +V A DG R G A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|268592915|ref|ZP_06127136.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131]
gi|291311707|gb|EFE52160.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131]
Length = 314
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A + L +H P + ++P+ TKGD I + L ++GGK
Sbjct: 3 STNIVRIATRKSPLALWQAHFVKDKLEQLH--PGLLVELVPMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ +L+ L
Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDNLEAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 121 PEGSIVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK L E P+ GQGA+ IE +N+ K +EL+ +N++ T V ERA L+
Sbjct: 181 ETRIKTALAPEQCLPAVGQGAVGIECRLNDSKTRELLAKLNNDATSTCVLAERAMNMRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A + ++ +V A DG + R + +A G A+ +
Sbjct: 241 GGCQVPIGSYAIWQDDKIWLRALVGAPDGSVIIRGERRVSPSEANQAGVSLAEELLERGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|113968732|ref|YP_732525.1| porphobilinogen deaminase [Shewanella sp. MR-4]
gi|114049125|ref|YP_739675.1| porphobilinogen deaminase [Shewanella sp. MR-7]
gi|117918843|ref|YP_868035.1| porphobilinogen deaminase [Shewanella sp. ANA-3]
gi|123131000|sp|Q0HQI7|HEM3_SHESR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123325438|sp|Q0HN99|HEM3_SHESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158512312|sp|A0KS60|HEM3_SHESA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|113883416|gb|ABI37468.1| porphobilinogen deaminase [Shewanella sp. MR-4]
gi|113890567|gb|ABI44618.1| porphobilinogen deaminase [Shewanella sp. MR-7]
gi|117611175|gb|ABK46629.1| porphobilinogen deaminase [Shewanella sp. ANA-3]
Length = 310
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L VH P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERVH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIHGDEMTLRGLVGNPDGSEIIEGVITGPKTEATKLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|312963804|ref|ZP_07778275.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6]
gi|311281839|gb|EFQ60449.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6]
Length = 313
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLELAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTYTSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPPGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + + L+K ++H DT V ERA L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSEIHALLKPLDHHDTEVRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V DG G + DA +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDNIWLRGLVGDPDGGTLLTAQARGPQADATALGIQVAEELLEKG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 AGAILQ 304
>gi|71278494|ref|YP_266842.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H]
gi|123733846|sp|Q48AW8|HEM3_COLP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71144234|gb|AAZ24707.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H]
Length = 317
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 107/308 (34%), Positives = 159/308 (51%), Gaps = 4/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG
Sbjct: 1 MNNTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L
Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C+ I + G ++ G+V + DG E G + +G AQ +
Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQELLS 298
Query: 299 ISNKNVFN 306
+
Sbjct: 299 RGADKILQ 306
>gi|59727198|gb|AAW92125.1| hydroxymethylbilane synthase [Enterobacter asburiae]
Length = 313
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L
Sbjct: 179 LESRIRVALPPELSLPAVGQGAVGIECRLDDARTRELLAPLNHDETAIRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELTEGELWLRALVGAPDGSQMVRGERRGKAQDAEQLGVSLAEELLDNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|261345249|ref|ZP_05972893.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541]
gi|282566947|gb|EFB72482.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541]
Length = 314
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A+ ++ L +H P + ++P+ TKGD I + L ++GGK
Sbjct: 3 STNIVRIATRKSPLALWQAYFVKAKLEQLH--PNLQVELVPMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ +L
Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 121 PAGSIVGTSSLRRQCQLKELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ IK L E P+ GQGA+ IE +++ + ++L+ +NH++T V ERA L+
Sbjct: 181 DERIKTALEPELSLPAVGQGAVGIECRLDDQRTRDLLAKLNHDETSICVLAERAMNMRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A + + ++ +V A DG R A G A+ +
Sbjct: 241 GGCQVPIGSYAIWQDNKIWLRALVGAPDGSTVIRGERLVEPEHATQAGIALAEELLDKGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|160877198|ref|YP_001556514.1| porphobilinogen deaminase [Shewanella baltica OS195]
gi|189028155|sp|A9L5G0|HEM3_SHEB9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|160862720|gb|ABX51254.1| porphobilinogen deaminase [Shewanella baltica OS195]
gi|315269402|gb|ADT96255.1| porphobilinogen deaminase [Shewanella baltica OS678]
Length = 310
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + DA +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTDATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|293390862|ref|ZP_06635196.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951396|gb|EFE01515.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 308
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG
Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDRLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQLKKLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L
Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + S LY +V + DG +A +G A +
Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDGSTIIRAEGKSAVENADVLGVQIADQLLAQG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ADKILQ 304
>gi|91791755|ref|YP_561406.1| porphobilinogen deaminase [Shewanella denitrificans OS217]
gi|91713757|gb|ABE53683.1| porphobilinogen deaminase [Shewanella denitrificans OS217]
Length = 315
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L +H P ++ ++P++TKGD + + L ++GG
Sbjct: 6 MSQHLIRIATRKSPLALWQAEFVKAELERIH--PGLSVELVPMTTKGDVLLDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +L +
Sbjct: 64 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNFANLAE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK
Sbjct: 124 LPKGAVVGTSSLRRQCQIRAMRPDLIIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 184 LISRIASYISPEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVIAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L G+V DG G + +A +G A+ +
Sbjct: 244 EGGCQVPIGAYAEIEGDELTLRGLVGNPDGSQIITGQVKGLKSEASQLGEQLAEILLAQG 303
Query: 301 NKNVFN 306
K + +
Sbjct: 304 AKTILD 309
>gi|183600277|ref|ZP_02961770.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827]
gi|188020068|gb|EDU58108.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827]
Length = 314
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A+ + L H P + ++P+ TKGD I + L ++GGK
Sbjct: 3 STNIVRIATRKSPLALWQAYFVKEKLEQFH--PGLQVELVPMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L
Sbjct: 61 GLFVKELELALLEKRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYDSLDAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 121 PAGSVVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ L E P+ GQGA+ IE +++ + ++L++ +N ++T V ERA L+
Sbjct: 181 EARIRTALAPEQSLPAVGQGAVGIECRLDDERTRQLLEKLNDDNTSVCVLAERAMNMRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A + ++ +V A DG R A G A+ +
Sbjct: 241 GGCQVPIGSYAIWQDGQIWLRALVGAPDGSQVIRGERLTTPEQATQAGISLAEELLDKGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|296046581|gb|ADG86432.1| hydroxymethylbilane synthase [Francisella novicida]
Length = 317
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 107/308 (34%), Positives = 161/308 (52%), Gaps = 4/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M++ RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG
Sbjct: 1 MKQTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L
Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C+ I + G ++ G+V + DG E G + +G AQ +
Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQELLS 298
Query: 299 ISNKNVFN 306
+
Sbjct: 299 RGADKILQ 306
>gi|261867394|ref|YP_003255316.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412726|gb|ACX82097.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 308
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG
Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDLLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQLKTLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L
Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + S LY +V + DG +A +G A+ +
Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDGSTIIRAEGKSAVENADVLGVQIAEQLLAQG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ADKILQ 304
>gi|332534414|ref|ZP_08410254.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505]
gi|332036148|gb|EGI72623.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505]
Length = 312
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 166/307 (54%), Gaps = 4/307 (1%)
Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I
Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAELERFHA--DVRVELVPMSTQGDIILDTPLAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPQGLALHTICEREDPRDAFVSNNFANL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R
Sbjct: 119 SALPQGAIVGTSSLRRQCQIKALRPDLDIRDLRGNVNTRLGKLDDGQYDAIILAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L+ E I + + E P+ GQGA+ IE +++ + L+ + H T VN ER+
Sbjct: 179 LEMESRIADYIEPEVSLPANGQGAVGIECRIDDEVTKALLAPLEHTQTRIRVNAERSMNR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I +A G ++ G+V A DG G+ DA IG + A+ +
Sbjct: 239 YLEGGCQVPIGAYALVDGEQVHLRGLVGAVDGSEILRDEVTGHVNDAEKIGIELAKKLLA 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 QGADKIL 305
>gi|332139557|ref|YP_004425295.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549579|gb|AEA96297.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 312
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGK
Sbjct: 6 TTRTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L
Sbjct: 64 GLFIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDAL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RLK
Sbjct: 124 PEGAIVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLKM 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ L + P+ GQGA+ IE ++ + L++ +NH DT V ERA L+
Sbjct: 184 QSRIRMALPADISLPAVGQGAVGIECRNDDEELIALLQALNHADTHTRVTAERAMNERLE 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I FA L G+V DG S +R A ++G + A+ +
Sbjct: 244 GGCQVPIGSFATLDNDVLTLTGMVGKPDGSELLFASATASREKAKDMGIEVAEALLEQGA 303
Query: 302 KNVF 305
+
Sbjct: 304 GEIL 307
>gi|315125211|ref|YP_004067214.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913]
gi|315013724|gb|ADT67062.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913]
Length = 312
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 168/307 (54%), Gaps = 4/307 (1%)
Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I
Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E+ ++ G D AVHS KD+P + L++ RED RD F+S+ ++
Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPDDLELHVICEREDPRDAFVSNNFANI 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R
Sbjct: 119 DALPQGAIVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDSGQYDAIILAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L+ + I++ + E P+ GQGA+ IE +N+ + L+ + H +T VN ERA
Sbjct: 179 LEMGERIRDFIEPEVSLPANGQGAVGIECRINDEVTKALLAPLEHSETRIRVNAERAMNR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I +A G ++ G+V A DG +G+ DA +G + A+ +
Sbjct: 239 HLEGGCQVPIGAYALVDGEQVHLRGLVGAIDGSEILRDEISGHVDDAEKLGVELAKKLLA 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 QGADKIL 305
>gi|90406695|ref|ZP_01214888.1| porphobilinogen deaminase [Psychromonas sp. CNPT3]
gi|90312148|gb|EAS40240.1| porphobilinogen deaminase [Psychromonas sp. CNPT3]
Length = 311
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A +S L+ H P + ++ + TKGD+I + L ++GG
Sbjct: 1 MSNKIIRIATRHSPLAMWQANFVKSELLKWH--PELQVELLAMKTKGDKILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL ++ RED RD F+S+ ++
Sbjct: 59 KGLFVKELEVAILEGRADIAVHSMKDVPVDFPEGLGLAVICEREDPRDAFVSNHFANIAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R DI V D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRAQRPDIKVKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++E+ P+ GQGA+ IE +++ + L+K + H T V ERA L
Sbjct: 179 MHDRIASYMSVEESLPAVGQGAVGIECRLDDMQTLALLKPLEHRITRLRVTAERAMNLAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I + K TL+ G+V + DG G DA +G + AQ +
Sbjct: 239 QGGCQVPIGSYCILKEDTLWLRGLVGSVDGTHIIRKEIRGKVADAEQMGLNLAQQLLESG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|307132975|ref|YP_003884991.1| hydroxymethylbilane synthase [Dickeya dadantii 3937]
gi|306530504|gb|ADN00435.1| hydroxymethylbilane synthase [Dickeya dadantii 3937]
Length = 313
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 115/307 (37%), Positives = 169/307 (55%), Gaps = 3/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG
Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLKACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL D
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYDSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GTSSLRR+ L R D++V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPVGACVGTSSLRRQCQLRAHRPDLTVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L
Sbjct: 179 LEDRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ I +A G TL+ +V A DG R G R DA +G A +
Sbjct: 239 EGGCQVPIGSYAELQDGDTLWLRALVGAPDGSRIIYAERRGLRQDAEQLGIALADELLER 298
Query: 300 SNKNVFN 306
+++
Sbjct: 299 GARDILQ 305
>gi|217975048|ref|YP_002359799.1| porphobilinogen deaminase [Shewanella baltica OS223]
gi|304412540|ref|ZP_07394146.1| porphobilinogen deaminase [Shewanella baltica OS183]
gi|307307199|ref|ZP_07586937.1| porphobilinogen deaminase [Shewanella baltica BA175]
gi|254800258|sp|B8E879|HEM3_SHEB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|217500183|gb|ACK48376.1| porphobilinogen deaminase [Shewanella baltica OS223]
gi|304349182|gb|EFM13594.1| porphobilinogen deaminase [Shewanella baltica OS183]
gi|306910438|gb|EFN40869.1| porphobilinogen deaminase [Shewanella baltica BA175]
Length = 310
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|240949414|ref|ZP_04753755.1| porphobilinogen deaminase [Actinobacillus minor NM305]
gi|240296163|gb|EER46819.1| porphobilinogen deaminase [Actinobacillus minor NM305]
Length = 308
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 160/303 (52%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A ++ L P I ++ + TKGD I + L +IGGKG
Sbjct: 2 KDTLRIATRQSPLALWQANFVKAELEK--HFPELQIELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQNLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 KGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L G
Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA + L +V + DG S A +G + A +
Sbjct: 240 GCQVPIGGFATLENDELTLNALVGSLDGSTIIRASGVAPVDKAEQLGIEVATKLLAQGAD 299
Query: 303 NVF 305
+
Sbjct: 300 KIL 302
>gi|322514003|ref|ZP_08067077.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976]
gi|322120153|gb|EFX92114.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976]
Length = 309
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 160/303 (52%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P + ++ + TKGD I + L +IGGKG
Sbjct: 2 KDILRIATRQSPLALWQANFVKKELEK--RFPELQVELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 60 LFVKELELALLEKRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYEAIILASAGLIRLGMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + +E P+ GQGA+ IET VN+ + + +NH T V ERA L G
Sbjct: 180 ERIRSFIAVEQSLPAAGQGAVGIETRVNDERVLNYLASLNHNPTACCVMAERAMNTRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA G+ + +V A DG S + DA +G A+ +
Sbjct: 240 GCQVPIGGFATLNGNEITLNALVGALDGSTIIRASGVADIEDAEQLGISVAEQLLAQGAD 299
Query: 303 NVF 305
+
Sbjct: 300 KIL 302
>gi|251793296|ref|YP_003008024.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700]
gi|247534691|gb|ACS97937.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700]
Length = 308
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P + ++P+ TKGD I + L +IGG
Sbjct: 1 MLEKTLKIATRQSPLALWQANYVKDCLQQLY--PDLIVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++ +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTFDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQSAVVGTSSLRRQCQLKALRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + +E P+ GQGA+ IE ++ + ++L+ + +T V ERA L
Sbjct: 179 LADRIASFIEVEQSLPAAGQGAVGIECRTDDVQVKQLLAPLADAETTCCVLAERAMNNHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + LY +V DG +A +G A+ +
Sbjct: 239 QGGCQVPIGGYAVLQQGQLYLRALVGNVDGSQIIRAEGKSAVKNADVLGVQIAEQLLAQG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ADKILQ 304
>gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040714|gb|ACT57510.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 307
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 307/307 (100%), Positives = 307/307 (100%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG
Sbjct: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD
Sbjct: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK
Sbjct: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL
Sbjct: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS
Sbjct: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
Query: 301 NKNVFNF 307
NKNVFNF
Sbjct: 301 NKNVFNF 307
>gi|126176187|ref|YP_001052336.1| porphobilinogen deaminase [Shewanella baltica OS155]
gi|153002481|ref|YP_001368162.1| porphobilinogen deaminase [Shewanella baltica OS185]
gi|166217785|sp|A3D9Q4|HEM3_SHEB5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217786|sp|A6WTG0|HEM3_SHEB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125999392|gb|ABN63467.1| porphobilinogen deaminase [Shewanella baltica OS155]
gi|151367099|gb|ABS10099.1| porphobilinogen deaminase [Shewanella baltica OS185]
Length = 310
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|300714797|ref|YP_003739600.1| Porphobilinogen deaminase [Erwinia billingiae Eb661]
gi|299060633|emb|CAX57740.1| Porphobilinogen deaminase [Erwinia billingiae Eb661]
Length = 313
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKILRIATRQSPLALWQAHYVQQRLMACH--PGLRVELVPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KD+P +GL + RED D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLEDRADIAVHSMKDVPIAFPEGLGLVTICEREDPLDAFVSNQYDSVDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLIIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ +A L+ +N +DT V ERA L
Sbjct: 179 LGDRIRYAMPAEESLPAVGQGAVGIECRLDDAQAIALLSALNDDDTAIRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G L+ G+V + DG R G R DA +G A+ +
Sbjct: 239 EGGCQVPIGSFALLQGDELWLRGLVGSPDGTAMIRGERRGPRADAEKMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|332995105|gb|AEF05160.1| porphobilinogen deaminase [Alteromonas sp. SN2]
Length = 311
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RI TR S LAL A ++ L++ H + ++P+ST+GDRI + L +IGGK
Sbjct: 5 KNRTIRIATRKSALALWQAEYVKAKLLEHHD--GIAVELVPMSTQGDRILDTPLAKIGGK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ +L L
Sbjct: 63 GLFIKELEVAMLEGRADIAVHSMKDLPVEFPEGFGLHAICERENPFDAFVSNHFDNLDAL 122
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ + + R D+ + D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 123 PEGAVVGTSSLRRQCQIRKHRPDLKIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLGM 182
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ IK L P+ GQGA+ IE ++ + L++ +NH +T V+ ERA L+
Sbjct: 183 EERIKTGLPASVSLPAVGQGAVGIECRNDDAELIALLQALNHGETQTRVSAERAMNERLE 242
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I FA G ++ G+V DG S G +A +IG + A+ +
Sbjct: 243 GGCQVPIGSFATLDGDSITLTGMVGQPDGSTLLFASATGPTKNAKSIGVEVAEALLEQGA 302
Query: 302 KNVF 305
+
Sbjct: 303 GEIL 306
>gi|288550563|ref|ZP_06391088.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316]
gi|288314627|gb|EFC53565.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316]
Length = 318
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL
Sbjct: 64 KGLFVKELELALLENRADIAVHSMKDVPVEFPQGLGLVTICERDDPRDAFVSNHYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ + SV+GTSSLRR+ L R D+ + RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 124 MPVGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGEYDAIILAVAGLKRLD 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + + L+ +NH+DT V ERA L
Sbjct: 184 LESRIRVALPPEFSLPAVGQGAVGIECRLDDDRTRALLAPLNHDDTAIRVKAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELSNGELWLRALVGAPDGSQMVRGERRGKPQDAEALGVSLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|260551059|ref|ZP_05825263.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624]
gi|260405826|gb|EEW99314.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624]
Length = 314
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 171/302 (56%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ ++D RG + TRL+KL++ + AI+LA AG+KRL E+
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIVDLRGNVGTRLSKLDDGQYDAIILASAGLKRLGLEE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQDVLALIQPLLHTETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ + +
Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSPDGQTLLRAELTDEAHNAQQLGENLARNLLEQGAGD 308
Query: 304 VF 305
+
Sbjct: 309 LL 310
>gi|269137476|ref|YP_003294176.1| porphobilinogen deaminase [Edwardsiella tarda EIB202]
gi|267983136|gb|ACY82965.1| porphobilinogen deaminase [Edwardsiella tarda EIB202]
gi|304557549|gb|ADM40213.1| Porphobilinogen deaminase [Edwardsiella tarda FL6-60]
Length = 317
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 158/305 (51%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RI TR SPLAL A R L + P I ++P+ T+GD + + L ++GGK
Sbjct: 8 TQPTLRIATRQSPLALWQAHYVRDQL--LTHWPQLTIELVPMVTRGDVLLDTPLAKVGGK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L
Sbjct: 66 GLFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQL 125
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+
Sbjct: 126 PPGSVVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQL 185
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ L E P+ GQGA+ IE + + + L+ +NH DT V ERA L+
Sbjct: 186 DDRIRTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHADTALRVCAERAMNTRLE 245
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G L+ +V A DG R G A +G A +
Sbjct: 246 GGCQVPIGSYAEIDGDQLWLRALVGAPDGSRIIRGERRGPLTQAEAMGTALADELLARGA 305
Query: 302 KNVFN 306
+ + +
Sbjct: 306 RTILD 310
>gi|120600512|ref|YP_965086.1| porphobilinogen deaminase [Shewanella sp. W3-18-1]
gi|146294670|ref|YP_001185094.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32]
gi|158512986|sp|A1RPD7|HEM3_SHESW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217787|sp|A4YBG2|HEM3_SHEPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120560605|gb|ABM26532.1| porphobilinogen deaminase [Shewanella sp. W3-18-1]
gi|145566360|gb|ABP77295.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32]
gi|319427906|gb|ADV55980.1| porphobilinogen deaminase [Shewanella putrefaciens 200]
Length = 310
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELEVAILEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKTISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I ++ E P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSGRIASFISAEQSLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEINGDEMTLRGLVGNPDGSEIIEGIITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|296105312|ref|YP_003615458.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059771|gb|ADF64509.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 313
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQFDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L
Sbjct: 179 LESRIRVALPPELSLPAVGQGAVGIECRLDDRRTRELLAPLNHDETAIRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELINGELWLRALVGAPDGSQMVRGERRGKPQDAEQLGISLAEELLDNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|262040885|ref|ZP_06014111.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041774|gb|EEW42819.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 318
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + + L + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPECLGLVTICERDDPRDAFVSNRYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A K L+ +V A DG R G A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|332290269|ref|YP_004421121.1| porphobilinogen deaminase [Gallibacterium anatis UMN179]
gi|330433165|gb|AEC18224.1| porphobilinogen deaminase [Gallibacterium anatis UMN179]
Length = 309
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K RI TR SPLAL A + L ++ P + ++ + TKGD + + L +IGG
Sbjct: 1 MQKDVLRIATRQSPLALWQANYIKHKLQVLY--PQLTVELVTMVTKGDVLLDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + +GL +S RED RD F+S+ SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPMQFPQGLHLSVICEREDPRDAFVSNRYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++V+GTSSLRR+ L R DI + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQNAVVGTSSLRRQCQLKALRPDIELKTLRGNVGTRLRKLDEGEYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I+ + E P+ GQGA+ +E ++ +L+K + H+DTWD V ERA L
Sbjct: 179 EQQRIRSFIAPEVSLPAVGQGAVGVECRQDDEWVNQLLKPLLHQDTWDRVIAERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A G L+ +V A DG R A +G A+ +
Sbjct: 239 QGGCQVPIAGYAILDGEQLFLRALVGAVDGSKVLRAEATAVRSQAEQLGIQVAEMLLAQG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 AQDLL 303
>gi|315178740|gb|ADT85654.1| porphobilinogen deaminase [Vibrio furnissii NCTC 11218]
Length = 312
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGK
Sbjct: 3 STTPIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PHGAIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+
Sbjct: 181 EQRIRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G L+ +V DG G R DA +G + A +
Sbjct: 241 GGCQVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|229593301|ref|YP_002875420.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25]
gi|259646262|sp|C3K424|HEM3_PSEFS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229365167|emb|CAY53424.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25]
Length = 313
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + L+K ++H DT V ERA L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSDIHALLKPLDHHDTEVRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V +G G +CDA +G AQ +
Sbjct: 239 NGGCQVPIACYAVLEGENLWLRGLVGDPEGGNLLTAEVRGPQCDATALGIQVAQALLDKG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 AGAILQ 304
>gi|212710180|ref|ZP_03318308.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM
30120]
gi|212687179|gb|EEB46707.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM
30120]
Length = 314
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A+ ++ L +H + ++P+ TKGD I + L ++GGK
Sbjct: 3 STNIVRIATRKSPLALWQAYFVKAKLEQLHS--GLQVELVPMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ L
Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 121 PAGSIVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ IK L E P+ GQGA+ IE +N+ + ++L+ +NH+ T V ERA L+
Sbjct: 181 DERIKTALEPEQSLPAVGQGAVGIECRLNDQRTRDLLAKLNHDATSICVLAERAMNMRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A +G ++ +V A DG R DAI G A+ +
Sbjct: 241 GGCQVPIGSYAIWQGDKIWLRALVGAPDGSQVIRGERLIAPVDAIQAGISLAEELLNKGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|260771623|ref|ZP_05880543.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14]
gi|260613400|gb|EEX38599.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14]
Length = 312
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P RI TR SPLAL A + +L H P + ++ + T+GD + + L ++GGK
Sbjct: 3 STPPIRIATRQSPLALWQAHFVKDALQAAH--PHLAVELVTMVTRGDVLLDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T SL+ L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYHSLEAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GT SLRR+ + R DI + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PHGAIVGTCSLRRQCQIKAARPDIIIKELRGNVGTRLAKLDAGEFDAIVLAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I ++ E P+ GQGA+ IE +++ + L++ +NH DT+D V CERA L
Sbjct: 181 EQRIASFISPEQSLPAVGQGAVGIECRLDDQRLLTLLEPLNHADTYDRVICERAMNLTLQ 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + G ++ +V DG G R A +G + AQ +
Sbjct: 241 GGCQVPIGSYTELDGEQIWLRALVGEPDGSRIIRGEIRGPRQQAERLGVELAQQLLDQGA 300
Query: 302 KNVFN 306
+++ N
Sbjct: 301 RDILN 305
>gi|260767548|ref|ZP_05876484.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972]
gi|260617448|gb|EEX42631.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972]
Length = 312
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGK
Sbjct: 3 STTPIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PHGAIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLQL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+
Sbjct: 181 EQRIRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G L+ +V DG G R DA +G + A +
Sbjct: 241 GGCQVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|260556364|ref|ZP_05828583.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606]
gi|260410419|gb|EEX03718.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606]
Length = 314
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 170/302 (56%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ + +
Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 308
Query: 304 VF 305
+
Sbjct: 309 LL 310
>gi|293610070|ref|ZP_06692371.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827302|gb|EFF85666.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 314
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 167/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ +E + L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHAETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 249 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGE 308
Query: 304 VF 305
+
Sbjct: 309 LL 310
>gi|146313619|ref|YP_001178693.1| porphobilinogen deaminase [Enterobacter sp. 638]
gi|167008813|sp|A4WG12|HEM3_ENT38 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145320495|gb|ABP62642.1| hydroxymethylbilane synthase [Enterobacter sp. 638]
Length = 313
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H+ + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACHQ--GLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELEIALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYASLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + + L+ +NH++T V ERA L
Sbjct: 179 LESRIRVAMPPELCLPAVGQGAVGIECRLDDDRTRALLSPLNHDETAIRVQAERAMNMRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G DA +G A +
Sbjct: 239 EGGCQVPIGSYAELINGELWLRALVGAPDGSQMVRGERRGLPQDAEMLGISLADELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|89093768|ref|ZP_01166714.1| porphobilinogen deaminase [Oceanospirillum sp. MED92]
gi|89081898|gb|EAR61124.1| porphobilinogen deaminase [Oceanospirillum sp. MED92]
Length = 313
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 176/306 (57%), Gaps = 4/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR SPLAL A ++ L H P N+ ++ +++KGD+I + L ++GGKG
Sbjct: 2 SRTIRIATRKSPLALWQAEYVKAELERHH--PGINVELLGMTSKGDKILDAPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ +++GE D AVHS KD+P + +GL ++ PRE D F+S+T S+++L
Sbjct: 60 LFVKELEEAMLAGEADIAVHSMKDVPMEFPEGLGLAVICPREQPTDAFVSNTYNSIEELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A + R D+ + RG + TRL KL++ + AI+LA AG+ RL+
Sbjct: 120 EGAVVGTSSLRREAQIREKRPDLQIKWLRGNVNTRLRKLDDGEYDAIILASAGLIRLEMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IE ++ + EL+K ++ ++T V+ ERA L+G
Sbjct: 180 ERIRSEISVEFSLPAGGQGAVGIECRTDDHELLELLKPLHDQETAWRVSAERAMNRRLEG 239
Query: 243 SCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ IA +A LY G+V DG + G A +G A +
Sbjct: 240 GCQVPIACYATLNDDNSELYLRGLVAKPDGTLILRDEERGTPEQAEQLGITLADRLLAAG 299
Query: 301 NKNVFN 306
K++ +
Sbjct: 300 AKSILD 305
>gi|299771850|ref|YP_003733876.1| porphobilinogen deaminase [Acinetobacter sp. DR1]
gi|298701938|gb|ADI92503.1| porphobilinogen deaminase [Acinetobacter sp. DR1]
Length = 309
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 169/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G
Sbjct: 184 RIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHEETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 244 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEASNAHQLGENLARNLLDQGAGE 303
Query: 304 VF 305
+
Sbjct: 304 LL 305
>gi|242237686|ref|YP_002985867.1| porphobilinogen deaminase [Dickeya dadantii Ech703]
gi|242129743|gb|ACS84045.1| porphobilinogen deaminase [Dickeya dadantii Ech703]
Length = 313
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 162/306 (52%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG
Sbjct: 1 MVDNILRIATRQSPLALWQAHYVQQRLQACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + L + R+D RD F+S+ +L
Sbjct: 59 KGLFVKELELALLEDRADIAVHSMKDVPVEFPAQLGLVTICERDDPRDAFVSNRYANLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+ RL
Sbjct: 119 LPPGAVVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLGKLDNGDYDAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L
Sbjct: 179 LEGRIRAALSPEQSLPAVGQGAVGVECRLDDTRTRALLAPLNHDDTAARVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G ++ +V + DG R G R DA +G A +
Sbjct: 239 EGGCQVPIGSYAELQGDAIWLRALVGSPDGSRIIRGERTGRRQDAEQLGISLADELLAAG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AREILQ 304
>gi|283787518|ref|YP_003367383.1| porphobilinogen deaminase [Citrobacter rodentium ICC168]
gi|282950972|emb|CBG90649.1| porphobilinogen deaminase [Citrobacter rodentium ICC168]
Length = 313
Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPAGLGLVTICEREDPRDAFVSNNYPSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + Q L+ +N E T V ERA L
Sbjct: 179 LESRIRAALPPEVSLPAVGQGAVGIECRLDDRRTQALLAPLNDEITALRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG + R G+ A +G A+ +
Sbjct: 239 EGGCQVPIGSYAEMIDGELWLRALVGAPDGSLMVRGERRGSPEQAEQMGISLAEELLDNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|239502040|ref|ZP_04661350.1| porphobilinogen deaminase [Acinetobacter baumannii AB900]
Length = 309
Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 170/302 (56%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + +Y G V + DG+ +A +G + A+ + +
Sbjct: 244 CQVPIAGYATLQDGKIYIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 303
Query: 304 VF 305
+
Sbjct: 304 LL 305
>gi|257465324|ref|ZP_05629695.1| porphobilinogen deaminase [Actinobacillus minor 202]
gi|257450984|gb|EEV25027.1| porphobilinogen deaminase [Actinobacillus minor 202]
Length = 308
Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 159/303 (52%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A ++ L P I ++ + TKGD I + L +IGGKG
Sbjct: 2 KDILRIATRQSPLALWQANFVKAELEK--HFPELQIELVTMVTKGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ QSL L
Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQSLDKLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 120 KGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L G
Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA + L +V + DG S A +G + A +
Sbjct: 240 GCQVPIGGFATLENDELTLNALVGSLDGSTIIRASGVAPVDKAEQLGIEVATKLLAQGAD 299
Query: 303 NVF 305
+
Sbjct: 300 KIL 302
>gi|169797472|ref|YP_001715265.1| porphobilinogen deaminase [Acinetobacter baumannii AYE]
gi|213155714|ref|YP_002317759.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057]
gi|169150399|emb|CAM88296.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
baumannii AYE]
gi|213054874|gb|ACJ39776.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057]
Length = 314
Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ + +
Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 308
Query: 304 VF 305
+
Sbjct: 309 LL 310
>gi|193076128|gb|ABO10737.2| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978]
Length = 309
Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 170/302 (56%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ + +
Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 303
Query: 304 VF 305
+
Sbjct: 304 LL 305
>gi|152978040|ref|YP_001343669.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z]
gi|189042873|sp|A6VL87|HEM3_ACTSZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150839763|gb|ABR73734.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z]
Length = 309
Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+++ +I TR SPLAL A + L +++ P + ++P+ TKGD I + L +IGG
Sbjct: 1 MQQEILKIATRQSPLALWQANFVKDRLTEIY--PDLTVELVPMVTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++G+ D AVHS KD+P + GL +S RED RD F+S+ ++L D
Sbjct: 59 KGLFVKELENALLNGDADIAVHSMKDVPMEFPAGLGLSVICKREDPRDAFVSNRYRTLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+++ RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 119 LPPGAIVGTSSLRRQCQLKKRRPDLNIRSLRGNVGTRLSKLDQGDYDAIILASAGLIRLA 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + E P+ GQGA+ IE +N+ + Q+L+ + +T V ERA L
Sbjct: 179 LPERIASFIETEISLPAAGQGAVGIECRINDQRVQKLLAPLADTETTACVLAERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A G+ L+ +V A DG +A +G A+ +
Sbjct: 239 QGGCQVPIGGYAVLNGNELHLRALVGALDGSKIIRAEGKSAVENAEVLGIQIAESLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|184156604|ref|YP_001844943.1| porphobilinogen deaminase [Acinetobacter baumannii ACICU]
gi|332874912|ref|ZP_08442763.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059]
gi|183208198|gb|ACC55596.1| Porphobilinogen deaminase [Acinetobacter baumannii ACICU]
gi|322506491|gb|ADX01945.1| hemC [Acinetobacter baumannii 1656-2]
gi|323516370|gb|ADX90751.1| porphobilinogen deaminase [Acinetobacter baumannii TCDC-AB0715]
gi|332736855|gb|EGJ67831.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059]
Length = 309
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 170/302 (56%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLTLIQPLLHPETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ + +
Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 303
Query: 304 VF 305
+
Sbjct: 304 LL 305
>gi|325124236|gb|ADY83759.1| porphobilinogen deaminase [Acinetobacter calcoaceticus PHEA-2]
Length = 309
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 169/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ ++ DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNRFETFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G
Sbjct: 184 RIRHCLTPDISLPAVGQGALGLECRAVDQDVLALIQPLLHEETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 244 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGE 303
Query: 304 VF 305
+
Sbjct: 304 LL 305
>gi|169634609|ref|YP_001708345.1| porphobilinogen deaminase [Acinetobacter baumannii SDF]
gi|169153401|emb|CAP02532.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
baumannii]
Length = 314
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 107/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEHICARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDICVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ + +
Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 308
Query: 304 VF 305
+
Sbjct: 309 LL 310
>gi|119469646|ref|ZP_01612515.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7]
gi|119446893|gb|EAW28164.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7]
Length = 312
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 164/307 (53%), Gaps = 4/307 (1%)
Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I
Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLALHTICEREDPRDAFVSNHFANL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ R
Sbjct: 119 NELPEGAVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDAGQYDAIILAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L+ + I + + E P+ GQGA+ IE + + + L+ + H T VN ERA
Sbjct: 179 LEMGERIADYIEPEVSLPANGQGAVGIECRIEDEVTKALLAPLEHTHTRIRVNAERAMNR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I +A ++ G+V A DG G+ DA +G + A+ +
Sbjct: 239 RLEGGCQVPIGAYALVDSEQVHLRGLVGAIDGSEILRDEVAGHINDAEKLGIELAEKLLA 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 QGADKIL 305
>gi|262280694|ref|ZP_06058477.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202]
gi|262257594|gb|EEY76329.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202]
Length = 314
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 171/302 (56%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL
Sbjct: 11 KTLKIATRQSPLALWQAEYIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ VID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQVIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + P+ GQGA+ +E + + L++ + HE+T V ERAF A L+G
Sbjct: 189 RIRHCLTPDISLPAVGQGALGLECRAADNEVLSLIQPLLHEETDVCVRAERAFNAYLEGG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V ++DG+ +A +G + A+ +
Sbjct: 249 CQVPIAGYATLQNGQIHIEGRVGSADGQTLLRAELTDEASNAHQLGENLARNLLDQGAGE 308
Query: 304 VF 305
+
Sbjct: 309 LL 310
>gi|157829875|pdb|1AH5|A Chain A, Reduced Form Selenomethionine-Labelled Hydroxymethylbilane
Synthase Determined By Mad
Length = 313
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLXASH--PGLVVELVPXVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSXKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAXNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQXGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|120553424|ref|YP_957775.1| porphobilinogen deaminase [Marinobacter aquaeolei VT8]
gi|166217776|sp|A1TXW9|HEM3_MARAV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120323273|gb|ABM17588.1| hydroxymethylbilane synthase [Marinobacter aquaeolei VT8]
Length = 313
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR S LAL A ++ L +H ++ +I + T+GD+I + L +IGG
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NVDVELIKIKTQGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ + +
Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNQYEHIDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A L R D+ + RG + TRL KL+ + AI+LA +G+KRL
Sbjct: 119 LPEGAVVGTASLRREAQLRANRPDLQIKVLRGNVNTRLAKLDAGEYDAIVLASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L P+ GQGA+ IE V + + EL+ +NH DTWD V+ ERA L
Sbjct: 179 FHDRIRYCLPDTFSLPAVGQGALGIECRVGDTELLELIDPLNHTDTWDRVSAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA +A + TL+ G+V A DG V R + +GR+ A+ + +
Sbjct: 239 EGGCQVPIAAYALLEDDNTLWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEQLLSM 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|330720492|gb|EGG98789.1| Porphobilinogen deaminase [gamma proteobacterium IMCC2047]
Length = 312
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 111/307 (36%), Positives = 162/307 (52%), Gaps = 3/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR S LAL A ++ L H+ + + + T+GD+I + L ++GG
Sbjct: 1 MTNKLLRIATRGSQLALWQAEYVKARLEAAHE--NLQVELDIMKTRGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL ++ RE D F+S+ S
Sbjct: 59 KGLFVKELETALLEKRADIAVHSMKDVPMEFPEGLGLAVICEREQPTDAFVSNHFASFDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R DI++ RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCHIRALRPDINIEFLRGNVNTRLAKLDDGQFDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+IE P+ GQGA+ +E V++ L+ V++ EDT V ERA L
Sbjct: 179 MGDRITEQLSIEQSLPAAGQGAVGVECRVDDKDTLALLSVLHDEDTSICVTAERAMNRHL 238
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IAGFA +G +Y G+V DG G DA IG A +
Sbjct: 239 NGGCQVPIAGFAVLEEGGQVYLQGMVANPDGDEVLRAELRGPVADAEQIGIRVADDLLSQ 298
Query: 300 SNKNVFN 306
+ + +
Sbjct: 299 GAQAILD 305
>gi|215484908|ref|YP_002327147.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294]
gi|301346814|ref|ZP_07227555.1| porphobilinogen deaminase [Acinetobacter baumannii AB056]
gi|301512648|ref|ZP_07237885.1| porphobilinogen deaminase [Acinetobacter baumannii AB058]
gi|301595532|ref|ZP_07240540.1| porphobilinogen deaminase [Acinetobacter baumannii AB059]
gi|332851472|ref|ZP_08433469.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150]
gi|332866846|ref|ZP_08437233.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113]
gi|213987600|gb|ACJ57899.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294]
gi|332729925|gb|EGJ61256.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150]
gi|332734374|gb|EGJ65495.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113]
Length = 309
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKGL
Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL +
Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + ++ G V + DG+ +A +G + A+ + +
Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 303
Query: 304 VF 305
+
Sbjct: 304 LL 305
>gi|325576792|ref|ZP_08147407.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC
33392]
gi|325160998|gb|EGC73116.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC
33392]
Length = 310
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 107/302 (35%), Positives = 163/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL DL
Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDDLPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ L + R D+ + RG + TRL+KL+N + AI+LA AG+ RL +
Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G
Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I G+A + ++ +V +DG +A +G A+ +
Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGETDGSAIIRAEGKSAVENAEALGVSIAEQLLAQGADK 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|238918086|ref|YP_002931600.1| porphobilinogen deaminase, [Edwardsiella ictaluri 93-146]
gi|238867654|gb|ACR67365.1| porphobilinogen deaminase, putative [Edwardsiella ictaluri 93-146]
Length = 317
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RI TR SPLAL A R L+ + P I ++P+ T+GD + + L ++GGK
Sbjct: 8 TQPTLRIATRQSPLALWQAHYVRDQLLA--QWPQLTIELVPMVTRGDVLLDTPLAKVGGK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L
Sbjct: 66 GLFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQL 125
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+
Sbjct: 126 PPGSVVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQL 185
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ L E P+ GQGA+ IE + + + L+ +NH +T V ERA L+
Sbjct: 186 EDRIRTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHAETALRVCAERAMNTRLE 245
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G L+ +V A DG + R G A +G A +
Sbjct: 246 GGCQVPIGSYAEIDGDRLWLRALVGAPDGSLMICGERRGPLAQAEAMGTALADELLARGA 305
Query: 302 KNVFN 306
+ + +
Sbjct: 306 RAILD 310
>gi|53802806|ref|YP_115447.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath]
gi|53756567|gb|AAU90858.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath]
Length = 351
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGK
Sbjct: 43 ASHTLRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGK 100
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L
Sbjct: 101 GLFVKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAEL 160
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 161 PADARIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGF 220
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ I E L E P+ GQGAI +E + + L+ ++H T V ERA LD
Sbjct: 221 QERIAETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLD 280
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAGFA +G TL G+V DG G+ +G+ A+++
Sbjct: 281 GGCQVPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGA 340
Query: 302 KNVF 305
+
Sbjct: 341 DEIL 344
>gi|85711585|ref|ZP_01042643.1| Porphobilinogen deaminase [Idiomarina baltica OS145]
gi|85694737|gb|EAQ32677.1| Porphobilinogen deaminase [Idiomarina baltica OS145]
Length = 310
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 157/303 (51%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LA+ A ++ L ++ P I ++P+ST+GD I + L +IGGKG
Sbjct: 2 SKTVRIATRKSKLAMWQAEHIQARLASLY--PELTIELVPMSTRGDIILDTPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++ G D AVHS KD+P + GL++ ED RD F+S+ QSL +L
Sbjct: 60 LFVKELEAAMLEGRADLAVHSMKDLPVEFPPGLELHTICESEDPRDAFVSNHYQSLNELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+
Sbjct: 120 EGAVVGTCSLRRRCQVKERFPHLIINDLRGNVQTRLRKLDEGQFDAIILAASGLIRLELG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + +ED P+ GQG + IE ++ + + L++ + T V ERA L G
Sbjct: 180 ERITSFIPVEDSLPANGQGVLGIEVRSDDDEIKALLEPLQCPTTRFRVLAERAMNRRLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I FA G L G+V DG G A +G + A+ +
Sbjct: 240 GCQVPIGAFAVVDGDHLSLRGLVGDPDGVEVIREEIQGPVEQAEALGIELAEKLLARGAG 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|119484355|ref|ZP_01618972.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
gi|119457829|gb|EAW38952.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
Length = 321
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + ++ L P + +ST+GD+I + L +IG KG
Sbjct: 8 TRTVRIGSRKSQLALVQTYWVQAELKK--HFPDIEFEVHTMSTQGDKILDVALAKIGDKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
LFT+E+E +++ + D AVHS KD+PT L +GL + RE+ D + H + L+
Sbjct: 66 LFTKELEVGMLNHDTDIAVHSLKDLPTNLPEGLMLGCVTERENPADALVVHERHKDKQLE 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L + D RG + TRL KL+ AI+LA AG+KRL
Sbjct: 126 TLPQGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLEKLDEGGYDAIILAVAGLKRL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I + ++ + + GQGA+ IE + E++KV+ H T + ERAFL E
Sbjct: 186 GMGDRIHQTISPDVSLHAVGQGALGIECRDGDENILEILKVLEHTPTAQRCHAERAFLRE 245
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I + + + L G+V + DGK + +G +A +G D A +R
Sbjct: 246 LEGGCQVPIGVNSEVENNQLTLIGMVASLDGKRLIRDTVSGETTNAEQLGIDLAHRLREQ 305
Query: 300 SNKNVFN 306
K + +
Sbjct: 306 GAKEILD 312
>gi|255320960|ref|ZP_05362133.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82]
gi|262379948|ref|ZP_06073103.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164]
gi|255301924|gb|EET81168.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82]
gi|262298142|gb|EEY86056.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164]
Length = 307
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 166/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGLF
Sbjct: 4 TLKIATRKSPLALWQAEHIRACLQELH--PGLTVELVTFVTQGDKILDTPLAKIGGKGLF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+ G D AVHS KD+P L GL + RED D F+S+ + + L
Sbjct: 62 VKELEAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRRK +L+ R D++++D RG + TRL+KL+ + AI+LA AG+KRL +
Sbjct: 122 ATVGTSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSER 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
IK L+ E P+ GQGA+ +E ++ +L+ + HE T V ERAF + L+G C
Sbjct: 182 IKHTLSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IA +A + L G V + DG I +G A +G + A+ + +
Sbjct: 242 QVPIAAYATLENGQLQLEGRVGSVDGLILLSSQVSGQPEHAEQLGIELAENLLSQGAGEL 301
Query: 305 F 305
Sbjct: 302 L 302
>gi|52424331|ref|YP_087468.1| porphobilinogen deaminase [Mannheimia succiniciproducens MBEL55E]
gi|61213369|sp|Q65VX7|HEM3_MANSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52306383|gb|AAU36883.1| HemC protein [Mannheimia succiniciproducens MBEL55E]
Length = 310
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 162/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +I TR SPLAL A + L ++ P + ++ + TKGD I + L +IGGK
Sbjct: 3 NKNHLKIATRQSPLALWQANYVKDRLTALY--PDLQVELVTMVTKGDVILDTPLAKIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+ +SL +L
Sbjct: 61 GLFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLAEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 121 PQGAIVGTSSLRRQCQLKSLRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLGM 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + + P+ GQGA+ IE V++ Q L+ + H++T V ERA L
Sbjct: 181 AERIASFIETDISLPAAGQGAVGIECRVDDELVQSLLAPLAHQETTICVLAERAMNNRLQ 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA K ++ +V A+DG +A +G A+ +
Sbjct: 241 GGCQVPIGGFAQVKNGEVFLRALVGATDGSQIIRAEGKSAVENAEVLGVQIAEDLLQQGA 300
Query: 302 KNVF 305
+
Sbjct: 301 DKIL 304
>gi|254424552|ref|ZP_05038270.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335]
gi|196192041|gb|EDX87005.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335]
Length = 319
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 107/309 (34%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL ++ L P + + T+GD+I + L++IG K
Sbjct: 6 ATRTIRIGSRKSQLALVQTHWVQAELSKA--FPDITFEVSTMETQGDKILDVALSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E ++S +D AVHS KD+PT+L +GL + RED D + H + L
Sbjct: 64 GLFTQELEDDMLSHRVDFAVHSLKDLPTQLPEGLMLGCVTEREDPADALVVHEKHKDKQL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +VIGTSSLRR A L D RG + TRL KL+ + AI+LA AG+ R
Sbjct: 124 DTLPEGAVIGTSSLRRLAQLRHHFPHFQFKDIRGNVNTRLRKLDEGEYDAIVLAAAGLNR 183
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I ++L E + GQGA+ IE + ++K + H T ERAFL
Sbjct: 184 LDMSDRIHQLLPAEISLHAVGQGALGIECRSGDEDILTVIKALEHLPTAQRCYAERAFLR 243
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I +G TL GIV + DG+ + + G DA ++G++ A+ +R
Sbjct: 244 ELEGGCQVPIGVNTRIEGDTLTLVGIVASLDGQQLIKDTVQGAPADAESMGKELAERLRE 303
Query: 299 ISNKNVFNF 307
+ + +
Sbjct: 304 QGAQKILDV 312
>gi|78484457|ref|YP_390382.1| porphobilinogen deaminase [Thiomicrospira crunogena XCL-2]
gi|123728099|sp|Q31JG5|HEM3_THICR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78362743|gb|ABB40708.1| hydroxymethylbilane synthase [Thiomicrospira crunogena XCL-2]
Length = 309
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 114/303 (37%), Positives = 172/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RI TR SPLA+ A ++ L H+ + ++P+STKGD+I + L +IGGKG
Sbjct: 2 KKTLRIATRKSPLAMWQAEFVKAELEKHHE--GLTVELLPMSTKGDKILDVPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++++GE D AVHS KD+P L +G + A L R + D F+S+ ++L
Sbjct: 60 LFTKELEDRMLAGEADIAVHSMKDVPMVLPEGFALGAILERHEPTDAFVSNDYAHFEELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRRKA L+ R D+ V D RG + TRL KL+ AI+LA +G+KRL+ +
Sbjct: 120 QGAVLGTSSLRRKAQLMAARPDLVVKDLRGNVGTRLGKLDAGDYDAIVLATSGLKRLELD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L+ E P+ QG + IE +P+ EL++V+NH DT ERA L+G
Sbjct: 180 ERIRHELSPETCLPAVSQGTLGIEYFEKDPEVLELIQVLNHRDTEIRTLAERAMNHRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I +A + +Y G+V A DG G++ D +G A+ +
Sbjct: 240 GCQVPIGVYAELEDDQIYLRGLVGALDGSEILRSEARGSQKDPETLGVYVAEQLLEQGAG 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|113478006|ref|YP_724067.1| porphobilinogen deaminase [Trichodesmium erythraeum IMS101]
gi|110169054|gb|ABG53594.1| hydroxymethylbilane synthase [Trichodesmium erythraeum IMS101]
Length = 320
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 108/308 (35%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RIG+R S LAL + + L P + +ST+GD+I + L +IG K
Sbjct: 6 STPTIRIGSRKSQLALIQTYWVQEKLEK--NFPNITFEVHKMSTQGDKILDVALAKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E ++ E D AVHS KD+PT L +GL + RE+ D + H + L
Sbjct: 64 GLFTKELELGMLQNETDLAVHSLKDLPTNLPEGLILGCVTERENPADALVLHEKLKDKQL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA+AG+ R
Sbjct: 124 ETLPEGAVIGTSSLRRLAQLRYHFPHLEFKDVRGNLNTRLAKLDAGEYDALILAFAGLHR 183
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +I+ E + GQGA+ IE + L+K + H T ERAFL
Sbjct: 184 LGMSDRIHQIIPPEISLHAVGQGALGIECRAGDNNILNLLKSLEHTATAQRCYAERAFLR 243
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I +G L G+V + DGK + G DA IG + AQ +R
Sbjct: 244 ELEGGCQVPIGVNTQIEGEQLTLTGLVASLDGKKLVKDIVTGATADAEQIGIELAQKLRK 303
Query: 299 ISNKNVFN 306
+ + +
Sbjct: 304 QGAQEILD 311
>gi|94501432|ref|ZP_01307951.1| porphobilinogen deaminase [Oceanobacter sp. RED65]
gi|94426397|gb|EAT11386.1| porphobilinogen deaminase [Oceanobacter sp. RED65]
Length = 310
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 162/300 (54%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR S LAL A +S L H + ++ + T+GD+I + L +IGGKGLF
Sbjct: 4 LKIATRSSKLALWQAEFVKSELEKFHS--DLQVELVKIKTQGDKILDTPLAKIGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E +++G+ D AVHS KD+P + +GL +S RE D F+S+ Q DL +
Sbjct: 62 KELETAMLNGDADIAVHSMKDVPMEFPEGLGLSVICEREMPTDAFVSNHYQRFLDLPQGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ +L R D+ V RG ++TRL KL+ + AI+LA AG+ RL+ E+ +
Sbjct: 122 HVGTSSLRRQCQVLAARPDLKVSSLRGNVQTRLGKLDAGEFDAIILASAGLLRLELEERV 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E P+ GQGA+ IE +++ Q+L+ ++H DT V ERA L G C+
Sbjct: 182 AEHMSDEISLPAGGQGAVGIECRMDDEVTQKLLAPLHHSDTASRVYAERALNKRLQGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA +A L+ G+V + DG G A +G AA+ + +
Sbjct: 242 VPIACYATLNDGELHLRGLVGSEDGSRIIRTEIRGPESQAEQLGIQAAEDLLAQGAGEIL 301
>gi|17229370|ref|NP_485918.1| porphobilinogen deaminase [Nostoc sp. PCC 7120]
gi|17130968|dbj|BAB73577.1| porphobilinogen deaminase [Nostoc sp. PCC 7120]
Length = 336
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 110/308 (35%), Positives = 167/308 (54%), Gaps = 5/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG K
Sbjct: 21 ARRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDK 78
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 79 GLFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQI 138
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++R
Sbjct: 139 DTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQR 198
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL
Sbjct: 199 LGMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLR 258
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R
Sbjct: 259 SLEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLRE 318
Query: 299 ISNKNVFN 306
+ + N
Sbjct: 319 QGAQEILN 326
>gi|220910316|ref|YP_002485627.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425]
gi|219866927|gb|ACL47266.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425]
Length = 322
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L P + + +ST+GD+I + L +IG K
Sbjct: 8 SSRTIRIGSRKSQLALVQTYWVQEQLQK--HFPDRSFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
GLFT+E+E+ ++S E D AVHS KD+PT L GL + RE+ D + + L
Sbjct: 66 GLFTKELEQGMLSQETDFAVHSLKDLPTHLPDGLILGCITERENPADALVMNEKYRDRPL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++R
Sbjct: 126 ETLPEGAVIGTSSLRRLAQLRHYFPHLTFKDVRGNVNTRLAKLDAGEYDALVLAVAGLQR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +IL E + GQGA+ IE ++P+ L+K + H+ T ERAFL
Sbjct: 186 LGFSDRIHQILPPEISLHAVGQGALGIECRSDDPEVLSLIKALEHQPTAWRCLAERAFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I +G L G+V + DG+ + G A +G + AQ +R
Sbjct: 246 ELEGGCQVPIGVNTQLEGDQLTLTGLVASLDGQRLIKDQITGAATTAEQMGTELAQRLRQ 305
Query: 299 ISNKNVF 305
+ +
Sbjct: 306 QGAEEIL 312
>gi|186683929|ref|YP_001867125.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102]
gi|186466381|gb|ACC82182.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102]
Length = 336
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL
Sbjct: 23 RTIRIGSRKSQLALVQTYWVQEQLQK--SFPDITFEVHTMSTQGDKILDVALAKIGDKGL 80
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120
FT+E+E +++ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 81 FTKELEVGMLNQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVVHEKHKDKQIDT 140
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL
Sbjct: 141 LPEGAVIGTSSLRRLAQLRHHFPHFTFKDVRGNLITRLAKLDAGEYDALILAAAGLERLG 200
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +I+ E + GQGA+ IE ++ + L+K I H T D ER+FL L
Sbjct: 201 MSDRVHQIIPKEISLHAVGQGALGIECRADDSELLTLLKAIEHPATRDRCLAERSFLRSL 260
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I G L GIV + DG+ + + G +A +G + A+ +R
Sbjct: 261 EGGCQVPIGVNTEISGENLTLTGIVASIDGQKLVKDTVTGIANNAEALGTELAELLRQQG 320
Query: 301 NKNVF 305
+ +
Sbjct: 321 AQEIL 325
>gi|330957337|gb|EGH57597.1| porphobilinogen deaminase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 313
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPPGLGLFCICEREDPRDAFVSNTFDSLET 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSSISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G + A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDNVWLRGLVGDPSGSLLLHAEARAPQTAAQALGVEVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|300866645|ref|ZP_07111332.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506]
gi|300335354|emb|CBN56492.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506]
Length = 323
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 159/307 (51%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KG
Sbjct: 9 TRTVRIGSRKSQLALVQTYWVQEQLQQ--RFPQCTFEVHTMSTQGDKILDVPLAKIGDKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
LFT+E+E ++S E D AVHS KD+PT L +GL + RE+ D + H + L+
Sbjct: 67 LFTKELEVGMLSNETDFAVHSLKDLPTNLPEGLILGCVSERENPADALVVHANHQDKQLE 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 127 TLPPGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLAKLDEGEYDAIILAVAGLQRL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +I++ E + GQGA+ IE + EL+K + H +T ERAFL E
Sbjct: 187 GMGDRVHQIISPEISLHAVGQGALGIECRAGDDDILELIKALEHTETAQRCYAERAFLRE 246
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G L G+V + DG+ + + G A +G D A +R
Sbjct: 247 LEGGCQVPIGVNTKIEGDQLTLTGLVASLDGQRLIKDTVTGAAATAELLGIDLAHRLRQQ 306
Query: 300 SNKNVFN 306
+ +
Sbjct: 307 GAQEILE 313
>gi|262373963|ref|ZP_06067240.1| porphobilinogen deaminase [Acinetobacter junii SH205]
gi|262310974|gb|EEY92061.1| porphobilinogen deaminase [Acinetobacter junii SH205]
Length = 305
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 168/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L +++ P + ++ T+GD+I + L +IGGKGL
Sbjct: 2 KTLKIATRQSPLALWQAEHIRARLNELY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ +L
Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNQYAHFDELPH 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL +
Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L P+ GQGA+ +E ++ + EL+ + HE T V ERAF A L+G
Sbjct: 180 RIRHCLAPTLSLPAVGQGALGLECRADDQELLELISPLQHEVTSICVRAERAFNAYLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + L+ G V + DGK + +G + +G A+ +
Sbjct: 240 CQVPIAGYATITQNQLHIEGRVGSVDGKTLLKEQLSGALDEGERLGVVLAEKLLAQGAGE 299
Query: 304 VF 305
+
Sbjct: 300 LL 301
>gi|110835183|ref|YP_694042.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2]
gi|123345297|sp|Q0VM28|HEM3_ALCBS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110648294|emb|CAL17770.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2]
Length = 310
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG
Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLRVELVRIKTQGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +L G + RED RD F+S+T L
Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A + R D+ V RG ++TRL KL+ AI+LA AG+KRL+
Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE + EL+ ++ DTWD V ERA L
Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IAGFA + L+ G+V DG R +G D A+ +
Sbjct: 239 EGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGTAPRGQGAELGIDIAEQLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADEIL 303
>gi|71738146|ref|YP_272379.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558699|gb|AAZ37910.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 328
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 16 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 74 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 134 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 194 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 254 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 313
Query: 301 NKNVF 305
++
Sbjct: 314 AADIL 318
>gi|61213332|sp|Q602K3|HEM3_METCA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 322
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGK
Sbjct: 14 ASHTLRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGK 71
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L
Sbjct: 72 GLFVKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAEL 131
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 132 PADARIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGF 191
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ I E L E P+ GQGAI +E + + L+ ++H T V ERA LD
Sbjct: 192 QERIAETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLD 251
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAGFA +G TL G+V DG G+ +G+ A+++
Sbjct: 252 GGCQVPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGA 311
Query: 302 KNVF 305
+
Sbjct: 312 DEIL 315
>gi|75910970|ref|YP_325266.1| porphobilinogen deaminase [Anabaena variabilis ATCC 29413]
gi|75704695|gb|ABA24371.1| hydroxymethylbilane synthase [Anabaena variabilis ATCC 29413]
Length = 336
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 110/308 (35%), Positives = 165/308 (53%), Gaps = 5/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG K
Sbjct: 21 ARRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDK 78
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 79 GLFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQI 138
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++R
Sbjct: 139 DTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQR 198
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I ++L E + GQGA+ IE N+ + ++K I H T D ER+FL
Sbjct: 199 LGMGDRIHQVLPKEVSLHAVGQGALGIECRANDAELITILKAIEHPQTRDRCLAERSFLR 258
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I G L G+V + DG+ + + +G+ DA IG A+ +R
Sbjct: 259 SLEGGCQVPIGVNTEINGDELILTGVVASVDGQNLVKDTVSGDASDAEAIGIRLAELLRE 318
Query: 299 ISNKNVFN 306
+ + N
Sbjct: 319 QGAQEILN 326
>gi|119511003|ref|ZP_01630124.1| porphobilinogen deaminase [Nodularia spumigena CCY9414]
gi|119464348|gb|EAW45264.1| porphobilinogen deaminase [Nodularia spumigena CCY9414]
Length = 323
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + R L P + + +ST+GD I + L +IG KG
Sbjct: 9 TRTIRIGSRKSQLALVQTYWVRDQLQK--SFPDISFEVHTMSTQGDNILDVALAKIGDKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E +++ EID AVHS KD+PT L GL ++ RE+ D + H + ++
Sbjct: 67 LFTKELEVGMLNQEIDFAVHSLKDLPTNLPSGLTLAVITERENPADALVVHDKYKDKQIE 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L + D RG + TRL KL++ + A++LA AG++RL
Sbjct: 127 TLPAGAVIGTSSLRRLAQLRNKFPHFTFKDVRGNLNTRLKKLDSGEYDALILAAAGLERL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +IL E + GQGA+ IE ++ + ++K I H +T D ERAFL
Sbjct: 187 GMSDRIHQILPKEISLHAVGQGALGIECRADDKEIINILKAIEHSETRDRCLAERAFLRI 246
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G L GIV + DG+ + + G DA +G + A +R
Sbjct: 247 LEGGCQVPIGVNTVIDGDNLTLTGIVASVDGQKLVKDTVTGAAKDAEKLGAELAALLREQ 306
Query: 300 SNKNVFN 306
+ +
Sbjct: 307 GAQEILE 313
>gi|301155139|emb|CBW14603.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae T3T1]
Length = 310
Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL +L
Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDELPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ L + R D+ + RG + TRL+KL+N++ AI+LA AG+ RL +
Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNSEYDAIILASAGLIRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G
Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I G+A + ++ +V +DG +A +G A+ +
Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGEADGSAIIRAEGKSAVENAEALGVTIAEQLLAQGADK 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|24211755|sp|Q8YVU6|HEM3_ANASP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 323
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 110/308 (35%), Positives = 167/308 (54%), Gaps = 5/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG K
Sbjct: 8 ARRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 66 GLFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQI 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++R
Sbjct: 126 DTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL
Sbjct: 186 LGMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R
Sbjct: 246 SLEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLRE 305
Query: 299 ISNKNVFN 306
+ + N
Sbjct: 306 QGAQEILN 313
>gi|294649011|ref|ZP_06726459.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC
19194]
gi|292825146|gb|EFF83901.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC
19194]
Length = 305
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 113/302 (37%), Positives = 164/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKGL
Sbjct: 2 KTLKIATRQSPLALWQAEHIRSRLNALY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL
Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ ++D RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIVDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G
Sbjct: 180 RIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A L G V + DGK + G+ A +G AQ +
Sbjct: 240 CQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQDLLDQGAGE 299
Query: 304 VF 305
+
Sbjct: 300 LL 301
>gi|218437216|ref|YP_002375545.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424]
gi|218169944|gb|ACK68677.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424]
Length = 320
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L H P + +ST+GD+I + L +IG KG
Sbjct: 7 TRTVRIGSRKSQLALVQTYWVQEQLQKHH--PDRQFEVETMSTQGDKILDVALAKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLK 119
LFT+E+E ++ G+ D AVHS KD+PTKL GL + R D D + H + ++
Sbjct: 65 LFTKELEVSMLEGQTDLAVHSLKDLPTKLPDGLMLGCITERVDPADGLVVNEKHKDKQIE 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLTRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +++ + + GQGA+ IE +P+ EL+KV+ H+ T D ER+FL E
Sbjct: 185 GMSDRIHQVIPSDISLHAVGQGALGIECRTEDPEILELLKVLEHQPTRDRCYAERSFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G TL G+V + DGK + + G DA +G+D A +R
Sbjct: 245 LEGGCQVPIGVNTSVDGDTLTLTGMVASLDGKKLIKDTITGKTTDAEQLGKDLAIRVRNA 304
Query: 300 SNKNVF 305
+
Sbjct: 305 GAGEIL 310
>gi|146280919|ref|YP_001171072.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501]
gi|145569124|gb|ABP78230.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501]
Length = 314
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKG
Sbjct: 4 SREIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL L
Sbjct: 62 LFVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 122 PGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFG 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L+G
Sbjct: 182 ERIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA +A +G L+ G+V DG + +A +G A+ + +
Sbjct: 242 GCQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEELLDQGAE 301
Query: 303 NVF 305
+
Sbjct: 302 QIL 304
>gi|83643194|ref|YP_431629.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396]
gi|123753698|sp|Q2SQ70|HEM3_HAHCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83631237|gb|ABC27204.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396]
Length = 311
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 162/306 (52%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ I TR S LAL A + L +H P + ++ L+TKGD I + L ++GG
Sbjct: 1 MPKQHLVIATRQSALALWQAEHVKQRLEALH--PGLTVELLGLTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + GL + A L RE D F+S+ SL +
Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPPGLGLGAILERETPMDAFVSNQYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ ++ RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPEGAVVGTSSLRRQCQLSERRPDLKILSLRGNVNTRLAKLDAGDFDAIILAASGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+E L E P+ GQGA+ IE +++P+A L+ + +T V+ ERA L
Sbjct: 179 FSGRIREELTPEVSLPAVGQGALGIECRLDDPEAMALIAQLQDAETTARVSAERAMNHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A G + G+V + DG G A +G + A+ +
Sbjct: 239 QGGCQVPIAGYAEITGDQMRLRGLVGSPDGAQVLRDEVEGPVAAAEALGTELAERLLQQG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 AGKILE 304
>gi|330812535|ref|YP_004356997.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380643|gb|AEA71993.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 313
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MCPREIRIATRKSALALWQAEYVKARLEAAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + L+ ++HEDT V ERA L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V +G R DA +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGEQVWLRGLVGDPNGGRLLSAEARAPRHDAEALGVRVAEDLLSQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|326796191|ref|YP_004314011.1| porphobilinogen deaminase [Marinomonas mediterranea MMB-1]
gi|326546955|gb|ADZ92175.1| Porphobilinogen deaminase [Marinomonas mediterranea MMB-1]
Length = 308
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K I TR S LAL A + L ++ P + ++ ++TKGD+I + L++IGG
Sbjct: 1 MKDK-IVIATRESKLALWQANTVKKQLETLY--PNLTVELLGMTTKGDQILDSPLSKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P KGL ++ RED D F+S+ SL +
Sbjct: 58 KGLFVKELESALLDGRADIAVHSMKDVPMAFPKGLGLAVICEREDPSDAFVSNKYSSLDE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR + + R D+ + RG + TRL KL+NN+ AI+LA AG+ RL+
Sbjct: 118 LPKGSVLGTSSLRRACQIQQHRPDLKIESLRGNVGTRLGKLDNNEYDAIILATAGLIRLE 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E IK L+ P+ GQGA+ IE N+ EL+ + H+DT+ V ERA L
Sbjct: 178 LEDRIKSRLSDTYCLPAGGQGAMGIECRDNDKDILELLAPLQHQDTYYRVTAERAVNKRL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ IA FA ++ G+V ++DG+ G +A +G A+ +
Sbjct: 238 NGGCQAPIACFATLSDGEIWLRGLVGSTDGQQMITGDIKGAPQNAEQLGITLAEDLLNRG 297
Query: 301 NKNVFN 306
+ + +
Sbjct: 298 AQRILD 303
>gi|225850000|ref|YP_002730234.1| porphobilinogen deaminase [Persephonella marina EX-H1]
gi|225645034|gb|ACO03220.1| porphobilinogen deaminase [Persephonella marina EX-H1]
Length = 308
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 115/301 (38%), Positives = 169/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L P + ++ + TKGD+I + L ++GGKGLF
Sbjct: 3 IRIGTRKSKLALWQANYIADQLKK--HFPDLEVELVKIVTKGDKILDVPLAKVGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S S++D+ +
Sbjct: 61 KEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRKA ++ R DI + D RG ++TR+ KL + I+LAYAG+KRL E +
Sbjct: 121 VLGTSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQYDGIILAYAGLKRLGLEGKV 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++IL + P+ QG + IE +++ K +E+V V+NH ++ ERAFL L+G C+
Sbjct: 181 RQILQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+AG++ L G V G S G+ DA ++G A+ + K V
Sbjct: 241 VPLAGYSEIVNGKLKITGFVSDLTGDRVFRDSMEGSLEDAESLGVKLAEKLLSDGAKEVL 300
Query: 306 N 306
Sbjct: 301 E 301
>gi|311693131|gb|ADP96004.1| porphobilinogen deaminase [marine bacterium HP15]
Length = 313
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR S LAL A ++ L +H + ++ + T+GD+I + L +IGG
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NITVELVKIKTQGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ ++
Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNHYDNVDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ + AI+LA +G+KRL
Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRVLRGNVNTRLAKLDAGEYEAIVLASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L P+ GQGA+ IE V++ +++ + H+DTWD V ERA L
Sbjct: 179 FHERIRYCLPDTLSLPAVGQGALGIECRVDDQDLLAMLEPLKHKDTWDRVTAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA +A + T++ G+V A DG V R + +GR+ A+ + +
Sbjct: 239 EGGCQVPIAAYALLEDDDTIWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEDLLAL 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|152997593|ref|YP_001342428.1| porphobilinogen deaminase [Marinomonas sp. MWYL1]
gi|150838517|gb|ABR72493.1| porphobilinogen deaminase [Marinomonas sp. MWYL1]
Length = 326
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A ++ L ++ P + ++ ++TKGD+I + L++IGGKG
Sbjct: 19 KDKIVIATRESQLALWQANNIKAQLESLY--PDMKVELLGMTTKGDQILDSPLSKIGGKG 76
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L G D AVHS KD+P +GL ++ RED D F+S+ +SL L
Sbjct: 77 LFVKELENALTEGLADIAVHSMKDVPMAFPEGLGLAVICEREDPHDAFVSNKVESLDQLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR L R D+ + D RG + TRL K+++ + AI+LA AG+ RL+
Sbjct: 137 SGAIVGTSSLRRSCQLRMKRPDLIIKDLRGNVNTRLKKMDDGEYDAIILATAGLVRLEML 196
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I++ + E P+ GQGA+ IE ++ + L+ + HE+T V ERA L+G
Sbjct: 197 DRIRQRIPAETSLPAGGQGAMGIECRSDDIQTINLLAPLQHEETAIRVTAERAVNERLNG 256
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C++ IA FA + TL+ G+V + DGK E G++ DA ++G A +
Sbjct: 257 GCQAPIACFAILENDTLWLRGLVGSPDGKTMIEGEIRGHKDDAKSLGVQLADDLLARGAD 316
Query: 303 NVFN 306
+ N
Sbjct: 317 IILN 320
>gi|153875202|ref|ZP_02003104.1| porphobilinogen deaminase [Beggiatoa sp. PS]
gi|152068334|gb|EDN66896.1| porphobilinogen deaminase [Beggiatoa sp. PS]
Length = 309
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL R L H P I ++ ++T+GD+I + L +IGGK
Sbjct: 3 NKNIIRIATRKSPLALWQTHHVRDILCHAH--PQLQIELVEMTTQGDKILDVPLAKIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L G++D AVHS KD+P + GL + + RE+ D F+S+ L
Sbjct: 61 GLFVKELENGLFEGKVDIAVHSMKDVPVEFPPGLILPVIMEREEPYDAFVSNHYSGFTAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR+ LL R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 121 PQGAIVGTSSLRRQCQLLVLRPDLQIRTLRGNVGTRLKKLDNGDYDAIILAAAGLKRLGM 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+E+L E P+ GQGAI IE ++ + Q+L+ V+NH+ T + + ERA +L+
Sbjct: 181 AERIREVLKPEVMLPAIGQGAIGIECRADDTETQQLIAVLNHKPTQERLKAERALNEQLN 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A + + G+V DGK G A +G++ A +
Sbjct: 241 GGCQVPIAGYAEIEAEMMTVRGLVGDIDGKEVLHHKVQGPIESAETLGKELATELLAQGA 300
Query: 302 KNVF 305
+
Sbjct: 301 DRLL 304
>gi|262375167|ref|ZP_06068401.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145]
gi|262310180|gb|EEY91309.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145]
Length = 310
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 115/302 (38%), Positives = 170/302 (56%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L D+H + ++ T+GD+I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQAEHIRARLQDLHA--GLQVELVTFVTQGDKILDTPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+T S ++L
Sbjct: 63 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNTYTSFEELPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL +
Sbjct: 123 GAKVGTSSLRRKTQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L E P+ GQGA+ +E ++ +L++ + H DT V ERAF A L+G
Sbjct: 183 RIRHTLTPEVSLPAVGQGALGLECRTHDQTVLDLIQPLLHADTDACVRAERAFNAYLEGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A K + G V + DG + + G DA +G A+ +
Sbjct: 243 CQVPIAGYATLKEGVISIEGRVGSIDGAVLLRAQQTGKTADAEQLGVKLAKDLLDQGAGE 302
Query: 304 VF 305
+
Sbjct: 303 LL 304
>gi|327479188|gb|AEA82498.1| porphobilinogen deaminase [Pseudomonas stutzeri DSM 4166]
Length = 312
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKG
Sbjct: 2 SREIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL L
Sbjct: 60 LFVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 120 PGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L+G
Sbjct: 180 ERIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA +A +G L+ G+V DG + +A +G A+ + +
Sbjct: 240 GCQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEELLDQGAE 299
Query: 303 NVF 305
+
Sbjct: 300 QIL 302
>gi|254427203|ref|ZP_05040910.1| porphobilinogen deaminase [Alcanivorax sp. DG881]
gi|196193372|gb|EDX88331.1| porphobilinogen deaminase [Alcanivorax sp. DG881]
Length = 310
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG
Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLAVELVRIKTQGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +L +G + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPEGFALPVICEREDPRDAFVSNTFDSLSS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A + R D+ V RG ++TRL KL+ + AI+LA AG+KRL+
Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVKSLRGNVQTRLGKLDAGEFDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE + + +L+ ++ DTWD V ERA L
Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREADTRTIDLLSPLSDVDTWDRVVAERAMNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C+ IAGFA + L+ G+V DG + R +G D A+ +
Sbjct: 239 DGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGSAPRAKGAELGIDIAEQLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADAIL 303
>gi|104784255|ref|YP_610753.1| porphobilinogen deaminase [Pseudomonas entomophila L48]
gi|123380753|sp|Q1I316|HEM3_PSEE4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|95113242|emb|CAK17970.1| porphobilinogen deaminase [Pseudomonas entomophila L48]
Length = 313
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLQVSLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T +SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFKSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLVRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHIDTADRVVAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRASAEALGVQVAEDLLSQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|15889908|ref|NP_355589.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58]
gi|23821691|sp|Q8UC46|HEM3_AGRT5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15157859|gb|AAK88374.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58]
Length = 309
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 167/306 (54%), Positives = 225/306 (73%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A+ETRS LM H +P I+ LSTKGDRIT+R L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRSRLMAAHGLPEEMFEIVVLSTKGDRITDRALSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E +L+SGE+D AVHS+KDMPT L +GL +SA+LPRED+RD FI TA L +
Sbjct: 61 KGLFTEELENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G++SLRR+AL+ R R D++VI FRG ++TRL KL +A A LLA+AG+KRL
Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLNVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K+ V EIL+ ++FPP+P QGAI +E+ + + + +L+ IN T+D+V CERAFLA L
Sbjct: 181 KDNVPTEILDPKEFPPAPAQGAIGVESRIGDARMDKLLAPINDRPTYDAVTCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A C+G L+F G++L DG+ H V +GNR DA+ +G+ A + +R +
Sbjct: 241 DGSCRTPIAGYATCEGDNLHFSGLILTPDGQTSHGVEISGNRRDALILGKKAGEEVRAKA 300
Query: 301 NKNVFN 306
N F
Sbjct: 301 GSNFFE 306
>gi|226951768|ref|ZP_03822232.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244]
gi|226837483|gb|EEH69866.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244]
Length = 305
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 114/302 (37%), Positives = 164/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKGL
Sbjct: 2 KTLKIATRQSPLALWQAEHIRSRLNTLY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL
Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G
Sbjct: 180 RIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A L G V + DGK + G+ A +G AQ +
Sbjct: 240 CQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQDLLDQGAGE 299
Query: 304 VF 305
+
Sbjct: 300 LL 301
>gi|313110333|ref|ZP_07796223.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016]
gi|310882725|gb|EFQ41319.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016]
Length = 313
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ +N++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSINVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|254238043|ref|ZP_04931366.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719]
gi|126169974|gb|EAZ55485.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719]
Length = 313
Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|254490211|ref|ZP_05103401.1| porphobilinogen deaminase [Methylophaga thiooxidans DMS010]
gi|224464558|gb|EEF80817.1| porphobilinogen deaminase [Methylophaga thiooxydans DMS010]
Length = 309
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR SPLA+ A + SL+ +H P + ++ + T+GD I + L ++GG
Sbjct: 1 MSKRTVRIATRNSPLAVWQAEFVKDSLLALH--PDLTVELVKMKTQGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED D F+S+ Q++ D
Sbjct: 59 KGLFVKELEQGMLDGRADIAVHSMKDVPVEFPEGLHLPVICKREDPHDAFVSNHYQTIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ R D+ V+ RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPHGARLGTSSLRRECQARTHRPDLEVLPLRGNVNTRLRKLDEGQFDAIILAMAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IET +++ + L+ ++ T + ERA L
Sbjct: 179 FDDRIRSALTPEQSLPAIGQGALGIETRIDDDEMNALIAPLHCPQTAIVLTAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A +G ++ G+V DG G DA +G A+ +
Sbjct: 239 SGGCQVPIAGYAMLEGDEVWLRGLVGRPDGTNTLYADVRGAAKDADKLGVQIAETLLTKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|15600453|ref|NP_253947.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAO1]
gi|107104362|ref|ZP_01368280.1| hypothetical protein PaerPA_01005437 [Pseudomonas aeruginosa PACS2]
gi|218894362|ref|YP_002443232.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58]
gi|254243856|ref|ZP_04937178.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192]
gi|12230932|sp|Q60169|HEM3_PSEAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740638|sp|B7V5F0|HEM3_PSEA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|9951571|gb|AAG08645.1|AE004938_7 porphobilinogen deaminase [Pseudomonas aeruginosa PAO1]
gi|126197234|gb|EAZ61297.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192]
gi|218774591|emb|CAW30408.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58]
Length = 313
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|116053408|ref|YP_793733.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14]
gi|122256573|sp|Q02EA3|HEM3_PSEAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115588629|gb|ABJ14644.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 313
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHSDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|49085204|gb|AAT51260.1| PA5260 [synthetic construct]
Length = 314
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|325294021|ref|YP_004279885.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3]
gi|325061874|gb|ADY65565.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3]
Length = 309
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 172/306 (56%), Positives = 225/306 (73%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A+ETR+ LM H +P I+ LSTKGDRIT+R L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRNRLMSAHGLPEDMFEIVVLSTKGDRITDRALSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E +L+SGE+D AVHS+KDMPT L KGL +SA+LPRED+RD FI TA L +
Sbjct: 61 KGLFTEELESQLLSGELDIAVHSSKDMPTVLPKGLYLSAFLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G++SLRR+AL+ R R D+SVI FRG++ETRL KL +A A LLA+AG+KRL
Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLSVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V +IL+ +DFPP+P QGAIC+E+ + + + EL+ IN T+D+V CERAFLA L
Sbjct: 181 MENVPTDILDPKDFPPAPAQGAICVESRIGDTRMDELLSPINDIPTYDAVTCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAGFA C G L+F G++L DG+ H V +G R DA ++GR A + +R +
Sbjct: 241 DGSCRTPIAGFATCHGEELHFSGLILTPDGQTSHSVEISGARKDAEDLGRKAGEDVRARA 300
Query: 301 NKNVFN 306
N F+
Sbjct: 301 GSNFFD 306
>gi|254414246|ref|ZP_05028013.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420]
gi|196178921|gb|EDX73918.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420]
Length = 321
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L P + + +ST GD+I + L++IG KGL
Sbjct: 10 RTIRIGSRKSQLALVQTYWVQEQL--HKHYPDRDFEVQTMSTHGDKILDVALSKIGDKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E +++ EID AVHS KD+PT L +GL + RE+ D + H + L
Sbjct: 68 FTKELEVGMLNQEIDLAVHSLKDLPTALPEGLVLGCVTERENPADALVLHAKHQGKQLDT 127
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG+KRL
Sbjct: 128 LPEGAVIGTSSLRRLAQLRYHFPHFTFKDIRGNLNTRLGKLDAGEFDALILAAAGLKRLD 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ E + GQGA+ IE ++P+ +++K I H T ERAFL EL
Sbjct: 188 MSDRIHQVIPSEISLHAVGQGALGIECRGDDPEILDVLKAIEHSPTAQRCYAERAFLREL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I KG+ L G+V DG + + G +A +G + AQ +R
Sbjct: 248 EGGCQVPIGVNTEIKGNNLILTGMVARLDGTSLIKDTVTGEATEAEALGVELAQLLRQQG 307
Query: 301 NKNVFN 306
+ + +
Sbjct: 308 AQEILD 313
>gi|152983553|ref|YP_001351322.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7]
gi|167008817|sp|A6VE37|HEM3_PSEA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150958711|gb|ABR80736.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7]
Length = 313
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PDLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L+ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADADLHALLAPLHHADTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG A +G A +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGSQLLRAEGRAPLAQAEALGVQVADDLLAQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|254784450|ref|YP_003071878.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901]
gi|237686105|gb|ACR13369.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901]
Length = 324
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LAL A +S L H P + ++PL+++GD+I + L ++GGKG
Sbjct: 15 KHTLRIATRKSALALWQAEFVKSELCRHH--PELAVELVPLTSRGDKILDVPLAKVGGKG 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ +I+GE D AVHS KD+P + +GL ++ RED RD +S+ +L +
Sbjct: 73 LFVKELEQAIIAGEADIAVHSMKDVPMEFPQGLGLAVICEREDPRDALVSNKYSNLDAIP 132
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR++ LL R D+ V RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 133 AGAVIGTSSLRRQSQLLAMRPDLEVTFLRGNVNTRLAKLDAGEYDAIILASAGLKRLQMV 192
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E + E P+ GQGA+ IE ++ + L++ ++H T +V ERA +L+G
Sbjct: 193 DRIAEFIAPEVMLPAGGQGAVGIECRTDDQETLALLQPLHHGVTEQAVLAERAMNRKLEG 252
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA + + L+ G+V DG G+ DA +G A+ +
Sbjct: 253 GCQVPIGGFAIHQDNQLWVRGLVADPDGSEVLYDQVIGDPADAETLGVVLAEKLLAAGAD 312
Query: 303 NVF 305
+
Sbjct: 313 AIL 315
>gi|87118400|ref|ZP_01074299.1| porphobilinogen deaminase [Marinomonas sp. MED121]
gi|86166034|gb|EAQ67300.1| porphobilinogen deaminase [Marinomonas sp. MED121]
Length = 308
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 172/305 (56%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K I TR S LAL A + SL ++ P + ++ ++TKGD+I N L++IGG
Sbjct: 1 MKDKII-IATRESQLALWQANNVKDSLAALY--PDIQVELLGMTTKGDQILNSPLSKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL ++ RED D F+S+ +L
Sbjct: 58 KGLFVKELEHALLDGRADIAVHSMKDVPMAFPEGLGLAVICEREDPTDAFVSNKYDNLAS 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR + L R D+ + D RG + TRL KL+N + AI+LA AG+ RL+
Sbjct: 118 LPQGAVVGTSSLRRSSQLALARPDLVIKDLRGNVNTRLRKLDNQEYDAIILATAGLMRLE 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
IKE ++ +D P+ GQGA+ IE ++ +L+ + H++T+ V ERA L
Sbjct: 178 MTDRIKERISDQDSLPAGGQGAMGIECRSDDADMIKLLAPLQHQETYYRVTAERAVNERL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ IA F+ +G LY G+V + DG G++ DA +G A+ +
Sbjct: 238 NGGCQAPIAAFSLLEGDELYLRGLVGSVDGSTILRDEIRGSKNDAHALGVQLAEKLIAAG 297
Query: 301 NKNVF 305
+
Sbjct: 298 ADTLL 302
>gi|284053907|ref|ZP_06384117.1| porphobilinogen deaminase [Arthrospira platensis str. Paraca]
Length = 322
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RI +R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + H + L
Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ E + GQGA+ IE + + E+VK + H T + ERAFL
Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGIECREGDTEILEVVKALEHTATAQRCHSERAFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I +G L G+V + DGK + + G DA +G + A ++
Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIELANQLKQ 305
Query: 299 ISNKNVF 305
+ +
Sbjct: 306 QGAEEIL 312
>gi|15603677|ref|NP_246751.1| porphobilinogen deaminase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722234|gb|AAK03896.1| Pbg [Pasteurella multocida subsp. multocida str. Pm70]
Length = 312
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG
Sbjct: 5 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L +
Sbjct: 63 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL
Sbjct: 123 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L
Sbjct: 183 QQQRITSLIDVTQCLPAVGQGAVGIECRQE-AEIELLLAPLADPETTACVLAERAMNRHL 241
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + L+ +V DG DA +G A+ +
Sbjct: 242 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQG 301
Query: 301 NKNVFN 306
+
Sbjct: 302 ADKILQ 307
>gi|146305321|ref|YP_001185786.1| porphobilinogen deaminase [Pseudomonas mendocina ymp]
gi|145573522|gb|ABP83054.1| hydroxymethylbilane synthase [Pseudomonas mendocina ymp]
Length = 312
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 163/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 3 REIRIATRKSALALWQAEYVKARLEQAH--PGLLVSLVPMVSRGDKLLDAPLAKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L
Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL +
Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFQD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ ++ ED P+ GQGA+ IE + + L+ ++H +T V ERA L+G
Sbjct: 181 RIRSSISAEDSLPAGGQGAVGIECRSADAEIHALLAPLHHRETALRVTAERALNKRLNGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA +A + L+ G+V DG + DA +G A+ + +
Sbjct: 241 CQVPIACYALLENDQLWLRGLVGQPDGGLLLRAEHRAASSDAEALGVRVAEALLAQGAEA 300
Query: 304 VF 305
+
Sbjct: 301 IL 302
>gi|296392119|ref|ZP_06881594.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAb1]
Length = 313
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSALHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|218246829|ref|YP_002372200.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801]
gi|218167307|gb|ACK66044.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801]
Length = 320
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KG
Sbjct: 7 TRSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E + ++D AVHS KD+PT L GL + R D D + + + L
Sbjct: 65 LFTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNKKHLDKQLD 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL E
Sbjct: 185 DMSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R
Sbjct: 245 LEGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLREA 304
Query: 300 SNKNVF 305
V
Sbjct: 305 GAGEVL 310
>gi|254502424|ref|ZP_05114575.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11]
gi|222438495|gb|EEE45174.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11]
Length = 308
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 142/305 (46%), Positives = 199/305 (65%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ P RIGTR S LALA A ETR+ LM H +P I+ + T GD+I +R L+E+GG
Sbjct: 1 MQSNPLRIGTRGSALALAQAHETRARLMAAHDLPEDAFEIVVIKTSGDQIQDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L D
Sbjct: 61 KGLFTKEIEEAMLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLMD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL
Sbjct: 121 LPHGAVVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGEVDATLLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ + +L EDF P+ GQGAICIE+ + + E+++ I+ +T ++ ERAFLA L
Sbjct: 181 LEEEVTSLLETEDFLPAVGQGAICIESREGDERTLEMLQAIHDRETQIRLDAERAFLAVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G A G L G VL DG H+ R+G DA+ IG+ A + ++
Sbjct: 241 DGSCRTPIGGLALLNGDELTLKGTVLKPDGSEVHDEVRSGGAVDAVQIGQAAGEALKAKM 300
Query: 301 NKNVF 305
Sbjct: 301 GPGFL 305
>gi|24211767|sp|Q9CK24|HEM3_PASMU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG
Sbjct: 2 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L +
Sbjct: 60 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL
Sbjct: 120 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L
Sbjct: 180 QQQRITSLIDVTQCLPAVGQGAVGIECRQE-AEIELLLAPLADPETTACVLAERAMNRHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + L+ +V DG DA +G A+ +
Sbjct: 239 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 ADKILQ 304
>gi|50083560|ref|YP_045070.1| porphobilinogen deaminase [Acinetobacter sp. ADP1]
gi|55976395|sp|Q6FFA9|HEM3_ACIAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49529536|emb|CAG67248.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
sp. ADP1]
Length = 311
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 115/302 (38%), Positives = 166/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +I TR SPLAL A R L ++ P + ++ T+GD+I + L +IGGKGL
Sbjct: 7 QTLKIATRQSPLALWQAEHIRDRLQALY--PELKVELVKFVTQGDKILDTPLAKIGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ S L L
Sbjct: 65 FVKELEAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNHVMSFDQLPL 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 125 GARVGTSSLRRKCQILKQRPDLEIIDLRGNVGTRLAKLDDGQYDAIVLASAGLKRLGLIS 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +N E P+ GQGA+ +E N+ K +L+ + H+ T V ERAF A L+G
Sbjct: 185 RIRHSINAEISLPAVGQGALGLECRANDKKILDLIAPLAHQPTSACVRAERAFNAYLEGG 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAGFA L G V + DGK + G+ A +G A+ +
Sbjct: 245 CQVPIAGFATLTQECLTLEGRVGSVDGKTLLKDHVEGHADQAEVLGVQLAKQLLAQGAGE 304
Query: 304 VF 305
+
Sbjct: 305 LL 306
>gi|330976469|gb|EGH76521.1| porphobilinogen deaminase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 313
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|257059870|ref|YP_003137758.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802]
gi|256590036|gb|ACV00923.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802]
Length = 320
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KG
Sbjct: 7 TRSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLK 119
LFT+E+E + ++D AVHS KD+PT L GL + R D D + H + L
Sbjct: 65 LFTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNQKHLDKQLD 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL E
Sbjct: 185 DMSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R
Sbjct: 245 LEGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLREA 304
Query: 300 SNKNVF 305
V
Sbjct: 305 GAGEVL 310
>gi|289625848|ref|ZP_06458802.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646420|ref|ZP_06477763.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
2250]
gi|298484668|ref|ZP_07002771.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160808|gb|EFI01826.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320326724|gb|EFW82769.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331302|gb|EFW87245.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330867941|gb|EGH02650.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330881670|gb|EGH15819.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 313
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|225848376|ref|YP_002728539.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644642|gb|ACN99692.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 308
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 179/304 (58%), Gaps = 6/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A + + +H + + ++ ++T GD+I + L +IGGKGLF
Sbjct: 2 KVRIGTRKSQLALWQANYIANLINQIHGV---EVELVKITTSGDKILDVPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE ++ GEID AVHS KD+PT+L +GL I A RED RD F+S +SLKDL
Sbjct: 59 VKEIEDAMLKGEIDIAVHSLKDVPTQLPEGLDIIAITEREDPRDAFLSTKYKSLKDLPAG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL +
Sbjct: 119 AVVGTSSLRRKSQIMKMRDDLIINDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ P+ QG + IE V++ + +++++ IN+++++ ER+FL L+G C
Sbjct: 179 ASYIFSPQEMIPAVCQGFLGIEARVDDERIKKILEPINNQESFIRATAERSFLKTLEGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISN 301
+ + + K ++ G + +GK F + S + N A +G+ A +
Sbjct: 239 QVPLGAYCEIKDDFIHITGFIADLEGKTFIKESLSEKLTNINQAKELGQRLANILLKRGG 298
Query: 302 KNVF 305
K++
Sbjct: 299 KDIL 302
>gi|66043333|ref|YP_233174.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a]
gi|289677629|ref|ZP_06498519.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5]
gi|302187597|ref|ZP_07264270.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae 642]
gi|75504025|sp|Q500N6|HEM3_PSEU2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|63254040|gb|AAY35136.1| Porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a]
gi|330901069|gb|EGH32488.1| porphobilinogen deaminase [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330952274|gb|EGH52534.1| porphobilinogen deaminase [Pseudomonas syringae Cit 7]
gi|330970393|gb|EGH70459.1| porphobilinogen deaminase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 313
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|293393888|ref|ZP_06638195.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582]
gi|291423715|gb|EFE96937.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582]
Length = 313
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PDLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL + R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPAGLGLVTICERDDPRDAFVSNRFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRQRRPDLLVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NHE T V ERA L
Sbjct: 179 LEQRIRSPMSPEESLPAVGQGAVGIECRLDDAVTRALLAPLNHELTATRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL+ +V A DG + R G A ++G + A+ +
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSLMVRGERRGPAAQAEHMGIELAEELLAKG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|90416175|ref|ZP_01224107.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207]
gi|90331900|gb|EAS47114.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207]
Length = 326
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 162/304 (53%), Gaps = 4/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR SPLAL A ++ L++ H P ++ ++ ++T+GD + + L ++GGKGL
Sbjct: 18 QTIRIATRKSPLALWQAEFVKAKLLENH--PDLDVQLVAMTTRGDVLLDTPLAKVGGKGL 75
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ D AVHS KD+P + GL ++ RED D F+S+ +L +L
Sbjct: 76 FVKELEVAMLENRADIAVHSMKDVPMEFPPGLGLTVICEREDPLDAFVSNRYANLAELPP 135
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+ + D+ + D RG + TRL KL+ AI+LA AG+ RL E
Sbjct: 136 GSVVGTSSLRRQCQIRAAFPDLQIKDLRGNVNTRLAKLDYGDYDAIILASAGLIRLGMEA 195
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I L E P+ GQGA+ IE +++ EL+K + H T V ERA L+G
Sbjct: 196 RIASRLESELCLPAGGQGAVGIECRLDDQATIELLKPLEHSQTRIRVTAERALNRRLEGG 255
Query: 244 CKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IA +A G +L G+V + DG + + + A +G + A+ +
Sbjct: 256 CQVPIACYAELDEAGESLQLRGLVGSVDGSLILQDQLSAPVAQAEQLGIELAERLLAAGA 315
Query: 302 KNVF 305
+
Sbjct: 316 GEIL 319
>gi|172039291|ref|YP_001805792.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142]
gi|171700745|gb|ACB53726.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142]
Length = 331
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 18 STRTIRIGSRKSQLALVQTYWIQEELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 75
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
GLFT+E+E ++ ++D AVHS KD+PT L +GL + R + D + H + L
Sbjct: 76 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVNETHQDKQL 135
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++R
Sbjct: 136 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQR 195
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ + + GQGA+ IE +P+ +L+KV+ H +T D ERAFL
Sbjct: 196 LDMSDRIHQVIPDDISLHAVGQGALGIECRSGDPEILDLLKVLEHTETRDRCYAERAFLR 255
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ I + + L G+V + DGK + + G A +G + A +R
Sbjct: 256 QLEGGCQVPIGVNTKIENNILTLTGMVASLDGKTLIKDTIQGEAAQAEKLGEELALRLRD 315
Query: 299 ISNKNVF 305
+
Sbjct: 316 EGATEIL 322
>gi|330985679|gb|EGH83782.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 313
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ ++ AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDASEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|257485539|ref|ZP_05639580.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331011831|gb|EGH91887.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 313
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|282901179|ref|ZP_06309108.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505]
gi|281193879|gb|EFA68847.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505]
Length = 322
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 111/307 (36%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KG
Sbjct: 8 SRIIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H Q+L
Sbjct: 66 LFTKELELGMINQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVFHQNHLGQTLA 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L SVIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 126 TLPPGSVIGTSSLRRLAQLRHKFPHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I EIL + + GQGA+ IE N+ + ++K I H T D ER+FL
Sbjct: 186 NMHHRIHEILPPDISLHAVGQGALGIECRENDLELITILKAIEHPQTRDRCLAERSFLRS 245
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G TL GIV + +G+ + + G DA +G A +R
Sbjct: 246 LEGGCQVPIGVNTEIDGETLTLTGIVASVNGENLVKNTITGAATDAEKLGTQLANILREQ 305
Query: 300 SNKNVFN 306
+
Sbjct: 306 GATEILE 312
>gi|288940050|ref|YP_003442290.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180]
gi|288895422|gb|ADC61258.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180]
Length = 308
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 111/300 (37%), Positives = 169/300 (56%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ A + L +H P + II ++TKGD++ + L+++GGKGLF
Sbjct: 5 IRIATRKSPLAMWQAEHVTARLKALH--PGLTVEIIGMTTKGDQLLDSPLSKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ +++GE D AVHS KD+P + +GL ++ + RE+ D F+S+T +L +L +
Sbjct: 63 KELEQGMLAGEADIAVHSMKDVPVEFPEGLHLAVIMERENPYDAFVSNTYANLAELPEGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+ RL E I
Sbjct: 123 CVGTSSLRRQCQLADRRPDLRIEPLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFESRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ D P+ GQGAI IE V++ + +L+ + DT D V ERA A L+G C+
Sbjct: 183 RDCIDPVDSLPAIGQGAIGIECRVDDERVHQLIAPLADRDTTDRVLAERAMNARLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I G A G L G+V +DG +G R +A IG A + +
Sbjct: 243 VPIGGHAVLDGDRLILKGLVGTTDGSRILRAEASGPRAEAEAIGVRVADDLLGQGADAIL 302
>gi|238756296|ref|ZP_04617611.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473]
gi|238705502|gb|EEP97904.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473]
Length = 315
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H + ++P+ T+GD I + L ++GG
Sbjct: 3 MSDKIIRIATRQSPLAMWQAHYVQQLLQTCHS--GLKVELVPMVTRGDIILDTPLAKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + R+D RD F+S+ Q + D
Sbjct: 61 KGLFVKELELALLEDRADIAVHSMKDVPIAFPQGLGLVTICERDDPRDAFVSNNYQRMDD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ V D RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 121 LPAGSIVGTSSLRRQCQLRQRRPDLIVKDLRGNVGTRLSKLDQGDYDAIILAVAGLNRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 181 LKDRIRYAMSPEESLPAVGQGAVGIECRLDDNLTRALLAPLNHRPTELRVCAERAMNTRL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TL+ +V A DG R G A +G + A +
Sbjct: 241 EGGCQVPIGSYAILEDDTLWLRALVGAPDGSQMICGERRGPATHAEQMGIELADELLSRG 300
Query: 301 NKNVF 305
K +
Sbjct: 301 AKAIL 305
>gi|254473214|ref|ZP_05086612.1| porphobilinogen deaminase [Pseudovibrio sp. JE062]
gi|211957935|gb|EEA93137.1| porphobilinogen deaminase [Pseudovibrio sp. JE062]
Length = 307
Score = 387 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 136/307 (44%), Positives = 195/307 (63%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KP RIGTR S LALA A ETR+ L H + + I+ + T GD+I +R L+E GG
Sbjct: 1 MQTKPIRIGTRGSALALAQAHETRARLAKAHGLTDDDFEIVVIKTTGDQIQDRPLSEAGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+ ID AVHS+KDMPT L GL ++AYLPRED+RD FIS + L D
Sbjct: 61 KGLFTKEIEEALLDKSIDLAVHSSKDMPTVLPDGLGMTAYLPREDVRDAFISPKVEKLTD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A + R R D+ V+ +RG ++TRL KL+ A LAYAG++RL
Sbjct: 121 LPQGAVVGSSSLRRQAQIKRLRPDLDVVMYRGNLQTRLRKLDEGVVDATFLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ ++++E F P+ GQGAI IE + + + ++ I+H +T + ERA+LAE+
Sbjct: 181 QGDLVTSLMDLEHFLPAVGQGAIGIEARLGDEETARILAPIHHAETESRLLLERAYLAEM 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG ++ +G + F G V+ DG H V G DA IGR+ + ++ S
Sbjct: 241 DGSCRTPIAGLSHVEGDRIKFRGEVIKPDGSQTHTVEGEGPVSDAEEIGRELGKELKAKS 300
Query: 301 NKNVFNF 307
N
Sbjct: 301 GPNFLEL 307
>gi|237809861|ref|YP_002894301.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187]
gi|237502122|gb|ACQ94715.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187]
Length = 308
Score = 387 bits (995), Expect = e-106, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 160/301 (53%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++P+ST+GD+I + L +IGGKGLF
Sbjct: 4 LRIATRKSPLALWQANFVKQQLELHH--PGLQVTLVPMSTQGDKILDTPLAKIGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ ++ D AVHS KD+P GL ++ R+D D F+S S+ +L +
Sbjct: 62 KELEQAMLENRADIAVHSMKDVPVDFPDGLGLAVICERDDPYDAFVSSRFASVYELPEGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG++RL K + I
Sbjct: 122 VVGTSSLRRQCQLRAQRPDLVIRDLRGNVNTRLAKLDAGDYDAIILAAAGLRRLDKAERI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE + + + L+ + H T V ERA L G C+
Sbjct: 182 RSRLPPELSLPANGQGAVGIECRLGDTQTLALLASLEHATTRYCVMAERAMNRTLQGGCQ 241
Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
I FA + L+ G+V + DGK +G + A +G+ A+ + ++
Sbjct: 242 VPIGAFAEMQDNDHLWLRGLVGSVDGKQIIHGDISGPKEQAEELGKLLAEQLLVQGADDI 301
Query: 305 F 305
Sbjct: 302 L 302
>gi|126658960|ref|ZP_01730102.1| porphobilinogen deaminase [Cyanothece sp. CCY0110]
gi|126619758|gb|EAZ90485.1| porphobilinogen deaminase [Cyanothece sp. CCY0110]
Length = 317
Score = 387 bits (995), Expect = e-106, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 4 SSRAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
GLFT+E+E ++ ++D AVHS KD+PT L GL + R + D + H + L
Sbjct: 62 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPDGLMLGCVTERVNPADALVVNEKHKDKQL 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++R
Sbjct: 122 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQR 181
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ + + GQGA+ IE +P+ +L+K + H +T D ERAFL
Sbjct: 182 LDMSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILDLLKALEHPETRDRCYAERAFLR 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I + + L G+V + DGK + + G + A +G++ A +R
Sbjct: 242 ELEGGCQVPIGVNTKIENNFLTLTGMVASLDGKTLIKDTIEGEQDQAEKLGQELAMRLRD 301
Query: 299 ISNKNVF 305
+
Sbjct: 302 AGATEIL 308
>gi|206889552|ref|YP_002248559.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741490|gb|ACI20547.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 311
Score = 387 bits (995), Expect = e-106, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 177/306 (57%), Gaps = 3/306 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ IG+R S LA+ A + L ++ P + I + T GD+I + L +IGGK
Sbjct: 4 KRNKIVIGSRGSKLAMWQANWVKDKLQTLY--PELKVEIEKIKTTGDKILDAPLAKIGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+S +D AVHS KD+PT++ +GLQISA RED RD FIS L +L
Sbjct: 62 GLFVKEIEEALLSKRVDLAVHSMKDVPTEIPEGLQISAICEREDPRDAFISKDGVLLNEL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR L R+D+ + RG ++TR+ KL + + AI+LA AG+KR+
Sbjct: 122 PQEAVLGTSSLRRTVQLKALRNDLVIKPLRGNVDTRIRKLKDGEFQAIVLAMAGVKRMGV 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E ++ + + + P+ GQGAI IET V++ EL+K +NHE+T + ERAFL+ +
Sbjct: 182 ENLVTQAFSEDLMIPAIGQGAIGIETRVDDDFVNELIKPLNHEETAICILAERAFLSVMG 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ +A A ++L G++ +GK+ + R G+ A ++G + A +
Sbjct: 242 GGCQVPLACHARIVNNSLKIVGMIGDPEGKMPVIKGFREGSLSQAQSLGVELANELLHRG 301
Query: 301 NKNVFN 306
K +
Sbjct: 302 GKEILE 307
>gi|325272336|ref|ZP_08138739.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51]
gi|324102530|gb|EGB99973.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51]
Length = 313
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PELRVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNHFASLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITATISVDDSLPAGGQGAVGIECRSADHAIHALLAPLHHHDTADRVVAERAMNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G + A+++
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRATAEALGVEVAEHLLGQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|253991598|ref|YP_003042954.1| porphobilinogen deaminase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783048|emb|CAQ86213.1| porphobilinogen deaminase [Photorhabdus asymbiotica]
Length = 313
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L + P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQFY--PDLEVQLVPMVTQGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSAKYHSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+++ D RG + TRL+KL+N AI+LA AG+KRL+
Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLTIRDLRGNVGTRLSKLDNGHYDAIILAVAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L+ + P+ GQGA+ IE +++ + + L+ +NH DT V ER L
Sbjct: 179 LHDRIRTPLSAKQLLPAVGQGAVGIECRLDDQQTRALLAPLNHYDTEICVLAERTMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V A DG + R DA G + A+ +
Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTVLPKDACQAGLELAEELLERG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|330501254|ref|YP_004378123.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01]
gi|328915540|gb|AEB56371.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01]
Length = 312
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 160/303 (52%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKG
Sbjct: 2 SREIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L
Sbjct: 60 LFVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 120 AGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ ++ ED P+ GQGA+ IE + L+ ++H +T V ERA L+G
Sbjct: 180 DRIRSSISAEDSLPAGGQGAVGIECRSADSDVHALLAPLHHRETALRVTAERALNKHLNG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA +A + L+ G+V DG + DA +G A+ +
Sbjct: 240 GCQVPIACYALLEDDQLWLRGLVGQPDGGLLLRAEERAASGDAEALGVRVAEALLAQGAD 299
Query: 303 NVF 305
+
Sbjct: 300 AIL 302
>gi|237801592|ref|ZP_04590053.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331024452|gb|EGI04508.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 313
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A +S L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSTREIRIATRQSALALWQAEYVKSRLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEDRADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFDSLQA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G + A+ +
Sbjct: 239 NGGCQVPIACYAILEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVEVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAKIL 303
>gi|256821394|ref|YP_003145357.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069]
gi|256794933|gb|ACV25589.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069]
Length = 311
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 169/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLA+ A +S L +H P + ++P++T+GD+I LT+IGG
Sbjct: 1 MSISTLRIATRQSPLAMWQAEYVQSRLQQLH--PDLTVELVPMTTQGDKILGTPLTKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL++ RED D F+S+ +L D
Sbjct: 59 KGLFVKELEQAMLEGRADIAVHSMKDVPYQFPEGLELKVICEREDPTDAFVSNKYHNLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRK LLR R D+ + D RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 119 LPCGANVGTSSLRRKIQLLRARPDLKITDLRGNVGTRLSKLDDGNYDAIVLASAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ E P+PGQGA+ IE N+P +++ + E T V ER L
Sbjct: 179 LEERIRSQFEPELMLPAPGQGAVGIEARTNDPDLDAILQPLQDETTSLRVLAERTITKTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
SC+ +A FA TL +V D + E S G DA+ IG +Q + +
Sbjct: 239 QASCQVPVAAFATINDDTLSLRALVGGVD-QQIIEASAEGPAQDALAIGHKVSQELLELG 297
Query: 301 NKNVFN 306
+ +
Sbjct: 298 ARELIQ 303
>gi|167031229|ref|YP_001666460.1| porphobilinogen deaminase [Pseudomonas putida GB-1]
gi|189028150|sp|B0KH05|HEM3_PSEPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166857717|gb|ABY96124.1| porphobilinogen deaminase [Pseudomonas putida GB-1]
Length = 313
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHADTADRVVAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRTAAETLGVQVAEDLLSQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|90023307|ref|YP_529134.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40]
gi|89952907|gb|ABD82922.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40]
Length = 308
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 170/302 (56%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR S LAL A + ++ L ++ P + + PL ++GD+I + L ++GGKGL
Sbjct: 2 KKIRIATRKSELALWQANDVKAKLEALY--PSLEVELFPLVSRGDKILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L++ E D AVHS KD+P + +GL+++ L RED RD ++S ++L L
Sbjct: 60 FVKELEHALLADEADIAVHSMKDVPMEFPEGLELAVILEREDPRDAWVSAGYENLDALPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
V+GTSSLRR++ +L R DI+V RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 120 GGVVGTSSLRRQSQILARRPDITVKFLRGNVNTRLAKLDAGEYDAIILAAAGLKRLKFGD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L+ E+ P+ GQGA+ IE + + +L++ ++H T + V ERA L+G
Sbjct: 180 RIRSYLSPEESLPAGGQGAVGIECRSADSETLKLLQALHHTITAEQVLAERAMNRRLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I FA + + L+ G+V DG G D +G + A+ +
Sbjct: 240 CQVPIGCFAVHQNNQLWLRGLVADPDGSKVIYDEMTGAAADGEKMGVELAEKLLAAGADK 299
Query: 304 VF 305
+
Sbjct: 300 IL 301
>gi|188996629|ref|YP_001930880.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931696|gb|ACD66326.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 310
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 177/306 (57%), Gaps = 8/306 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A L ++H + ++ ++T+GD+I + L +IGGKGLF
Sbjct: 2 KIRIGTRKSQLALWQANYIADRLREIH---GIEVELVKITTQGDKILDVPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S +++ L +
Sbjct: 59 VKEIEDALLRNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIRYENIYQLPEN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL +
Sbjct: 119 TVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C
Sbjct: 179 VKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-----RNGNRCDAINIGRDAAQYIRFI 299
+ + + K ++ G + +GK +++ + + AI +G+ A+ +
Sbjct: 239 QVPLGAYCEIKENSFIITGFIADLEGKEYYQEKMIEQIKENPQEQAIILGKTLAEKLLND 298
Query: 300 SNKNVF 305
K +
Sbjct: 299 GGKQIL 304
>gi|226311390|ref|YP_002771284.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599]
gi|259647803|sp|C0ZAH1|HEM3_BREBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226094338|dbj|BAH42780.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599]
Length = 309
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 165/300 (55%), Gaps = 5/300 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF +
Sbjct: 5 KVGTRRSKLALTQTNWVVDKLK--GFAPEADFELHEIVTKGDRILDVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L E D AVHS KDMP +L GL I A R D RDV +S ++L +L ++
Sbjct: 63 EIEQSLFDKETDFAVHSLKDMPAELPDGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGAL 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR + +L +R DI + RG I+TR+ KL AI+LA AG++R+ E I
Sbjct: 123 VGTSSLRRSSQILAYRPDIQIESLRGNIDTRMRKLAEGNFDAIILAAAGLERVNFEGEIS 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ L +E P+ GQGA+ IE ++ + L+K + T +V+ ER+FL +L G C+
Sbjct: 183 QFLPVEISLPAVGQGALAIECRADDEETLALLKQFDDAPTRLAVSAERSFLHKLQGGCQV 242
Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +A + + + G+V + DGK + + G D + +G A+ + +V
Sbjct: 243 PIGAYATVGENNEITLTGMVGSPDGKQMFKNTATG--QDPLALGIQVAEALLAQGAGDVL 300
>gi|209526164|ref|ZP_03274695.1| porphobilinogen deaminase [Arthrospira maxima CS-328]
gi|209493420|gb|EDZ93744.1| porphobilinogen deaminase [Arthrospira maxima CS-328]
Length = 322
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RI +R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + H + L
Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ E + GQGA+ +E + + E+VK + H T + ERAFL
Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGLECREGDTEIFEVVKALEHTVTAQRCHSERAFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I +G L G+V + DGK + + G DA +G A ++
Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIQLAHKLKQ 305
Query: 299 ISNKNVF 305
+ +
Sbjct: 306 QGAEEIL 312
>gi|307942602|ref|ZP_07657950.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4]
gi|307774241|gb|EFO33454.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4]
Length = 307
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 142/305 (46%), Positives = 197/305 (64%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RIGTR S LALA A ETR LM H +P I+ + T GD+I +R L+E+GG
Sbjct: 1 MQSTLLRIGTRGSQLALAQAHETRDRLMAAHGLPEDAFEIVVVKTSGDQIQDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE L+ G +D AVHS+KDMPT L GL I+A+LPRED+RD FIS A++L+D
Sbjct: 61 KGLFTKEIEDMLLDGSLDLAVHSSKDMPTVLPAGLDITAFLPREDVRDAFISPKAKTLRD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL+ A LLA+AG+KRL
Sbjct: 121 LPHGAVVGSSSLRRQAMVKRLRPDIDVVMYRGNVQTRLRKLDEGVVDATLLAHAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ ++ +DF P+ GQGAIC+E+ +++ K L+ IN +T + ERAFL L
Sbjct: 181 LGDVVTSVIEADDFVPAVGQGAICLESRLDDEKTNGLLSAINDPETRVRLEAERAFLGVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG+C++ I G A G TL G++L DG HEV +G+ DA IG A + ++ +
Sbjct: 241 DGTCRTPIGGLATVDGDTLTLKGVILKPDGSQMHEVEHSGSVQDAEAIGLAAGEELKSKA 300
Query: 301 NKNVF 305
N
Sbjct: 301 GPNFL 305
>gi|70733286|ref|YP_263060.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5]
gi|123734674|sp|Q4K3X3|HEM3_PSEF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|68347585|gb|AAY95191.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5]
Length = 313
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L + H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLQEAH--PGLVVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ + D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLENQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPEGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT V ERA L
Sbjct: 179 FEDRISSSISVDDSLPAGGQGAVGIECRSADIEIHALLAPLHHADTASRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + G R A +G A +
Sbjct: 239 NGGCQVPIACYAVLEGEQIWLRGLVGEPSGGLLLSAEARGPRASAAELGVQVADALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 ADDIL 303
>gi|262370151|ref|ZP_06063478.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046]
gi|262315190|gb|EEY96230.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046]
Length = 306
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 112/302 (37%), Positives = 168/302 (55%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A R+ L +H + ++ T+GD+I + L +IGGKGL
Sbjct: 2 KTLKIATRQSPLALWQAEHIRARLEALHA--GLTVELVTFVTQGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S++ S L
Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNSYVSFDALPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL +
Sbjct: 120 GAKVGTSSLRRKCQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + E P+ GQGA+ +E N+ +L+ + H DT V ERAF A L+G
Sbjct: 180 RICHTIRPELSLPAVGQGALGLECRANDQAVLDLIHPLLHIDTDTCVRAERAFNAYLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IAG+A + + G V + DG+ + G+ +A ++G AQ + +
Sbjct: 240 CQVPIAGYATLADNRIQLEGRVGSVDGQTLLKAQVAGDAAEAEHLGVVLAQELLAQGAGD 299
Query: 304 VF 305
+
Sbjct: 300 LL 301
>gi|330890195|gb|EGH22856.1| porphobilinogen deaminase [Pseudomonas syringae pv. mori str.
301020]
Length = 313
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HED V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDPAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 GADIL 303
>gi|330876446|gb|EGH10595.1| porphobilinogen deaminase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 313
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|77461708|ref|YP_351215.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1]
gi|123602840|sp|Q3K4T0|HEM3_PSEPF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77385711|gb|ABA77224.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1]
Length = 313
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEAAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTADRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGEPSGGKLLNAQARAPRAAAETLGVQVAEDLLSQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 ADDIL 303
>gi|117924047|ref|YP_864664.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1]
gi|117607803|gb|ABK43258.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1]
Length = 314
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 112/307 (36%), Positives = 169/307 (55%), Gaps = 3/307 (0%)
Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M RIGTR S LA+ A +S L H P + + + TKGD+I + L ++G
Sbjct: 1 MSDPQLVRIGTRGSALAVWQAEWVKSQLQAHH--PGIIVELELIKTKGDKILDVPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ ++ G +D AVHS KD+P + GL + L RED RD +S QSL
Sbjct: 59 GKGLFVKELEEAMLDGRVDLAVHSMKDVPAEFPDGLMLGPILKREDPRDALLSIHYQSLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L ++IG+SSLRR++ + R D+ + RG + TR+ KL + AI+LA AG+KRL
Sbjct: 119 ELPQGALIGSSSLRRQSQIKAKRPDLRLDWLRGNVGTRIQKLVEGQFDAIILAAAGVKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + L E+ P+ GQGA+ IE V++ + L+ + H++T V ERAFLA+
Sbjct: 179 GLTEHVVQYLEPEEMLPAVGQGAVGIEHRVDDARIATLLAPLYHKETHSCVTAERAFLAK 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAG+A TL G+V +G + G R DA +G+ A +
Sbjct: 239 LEGGCQVPIAGYATLHEDTLTLRGLVAEVEGGRVVQAQCQGPRADAYRMGQQLATQLLEA 298
Query: 300 SNKNVFN 306
+
Sbjct: 299 GGGAILQ 305
>gi|269103733|ref|ZP_06156430.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163631|gb|EEZ42127.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 294
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 162/290 (55%), Gaps = 2/290 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L H P + ++P+ TKGD I + L ++GGKGLF +E+E ++ G
Sbjct: 1 MWQAEFVKAELEKAH--PGLVVELVPMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P + +GL + RED RD F+S+ SL++L S++GTSSLRR+
Sbjct: 59 ADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNRYNSLEELPQGSIVGTSSLRRQC 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L R D+ V D RG + TRL KL++ + AI+LA AG+KRLK + I+ + E P
Sbjct: 119 QLRSQRPDLIVKDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRAAIAPETSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE +++ + ++L+ +NH++T V CERA L G C+ I +A +G
Sbjct: 179 AVGQGAVGIECRLDDTRVRDLLAALNHQETATRVLCERAMNNRLQGGCQVPIGSYAELQG 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
++ +V DG +G+ DA +G A+ + K +
Sbjct: 239 DQIWLRALVGEPDGSQIVRGEISGSANDAEALGTQLAEQLLADGAKPILE 288
>gi|39998374|ref|NP_954325.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA]
gi|55976461|sp|Q747I1|HEM3_GEOSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|39985320|gb|AAR36675.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA]
gi|298507314|gb|ADI86037.1| hydroxymethylbilane synthase [Geobacter sulfurreducens KN400]
Length = 318
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 169/305 (55%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MALNRLRIGTRASQLALWQANWVKSELEK--RYPGMEVELVKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS+ + +
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFISN-GVTFAN 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL +K A++LA AG+KRL
Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDLEMVIIRGNVETRIRKLTEDKLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ E L ++ P+ GQGA+ +E +++ +E + NH DT +V ERA L
Sbjct: 178 FTDVVTEYLPVDLSLPAIGQGALGLECRLDDQAVRETIDFFNHPDTAHAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA G +L G + + DG + S +G D +G A+ +
Sbjct: 238 EGGCQVPIAAHGQVSGDSLTLTGFIASVDGTRSVKESISGPVTDCEKLGIALAEKLLADG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHEIL 302
>gi|326561756|gb|EGE12091.1| porphobilinogen deaminase [Moraxella catarrhalis 7169]
Length = 321
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|149376990|ref|ZP_01894744.1| porphobilinogen deaminase [Marinobacter algicola DG893]
gi|149358767|gb|EDM47237.1| porphobilinogen deaminase [Marinobacter algicola DG893]
Length = 313
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR S LAL A +S L +H + ++ + T+GD+I + L +IGG
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKSELERLHD--NVTVELVKIKTQGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ +++G D AVHS KD+P + +GL + A RED D F+S+ ++
Sbjct: 59 KGLFVKELEEAMLAGSADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNDYDNVNA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRTLRGNVNTRLAKLDAGDYQAIVLASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L P+ GQGA+ IE +++ + +++ ++H D+ D V ERA L
Sbjct: 179 FHDRIRYCLPDSISLPAVGQGALGIECRLDDAELIAMLEPLDHRDSSDRVKAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C+ IA +A + L+ G+V A DG V R + +GR+ A+ + +
Sbjct: 239 QGGCQVPIAAYALLEDNDMLWLRGLVGAVDGTQVFRVEGRAPRSEGERLGRELAEDLLAL 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|269468208|gb|EEZ79901.1| porphobilinogen deaminase [uncultured SUP05 cluster bacterium]
Length = 304
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 169/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A ++ L H P NI ++ ++T+GD+I N L++IGGKG
Sbjct: 2 NKTLKIATRKSPLALWQAEHVKTRLETHH--PDLNIELVKMTTQGDQILNSPLSKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++ G D AVHS KDMP ++ +G + A L RE+ D F+S+ ++ DL
Sbjct: 60 LFIKELEVGMMEGVADIAVHSMKDMPYEIPQGFALGAILKRENPFDAFVSNHFDNIDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT S+RR L R D+ ++D RG + TRL KL++ + AI+LA AG+ RL E
Sbjct: 120 QCAKVGTCSMRRIVQLKAIRPDLEILDLRGNVNTRLKKLDDGEYDAIILACAGLIRLGFE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
IK+ ++ E P+ GQGA+ IE N+ + +L+ + +T V+ ERA +L+G
Sbjct: 180 DRIKQQISPEQSLPAVGQGAVGIEIRENDQEILDLITPLIDVETTHRVSAERAMNEKLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C IAGF+ + + G+V D + G+ A +G + A + + +
Sbjct: 240 GCSVPIAGFSTIDNNQMTLTGLVGNVDTGTILKQQVCGDVAKAEALGVELADKLLSLGAR 299
Query: 303 NVF 305
+V
Sbjct: 300 DVL 302
>gi|78224425|ref|YP_386172.1| porphobilinogen deaminase [Geobacter metallireducens GS-15]
gi|123742774|sp|Q39QM7|HEM3_GEOMG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78195680|gb|ABB33447.1| Porphobilinogen deaminase [Geobacter metallireducens GS-15]
Length = 318
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 163/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MAPKQLRIGTRASQLALWQANWVKGELEK--RYPGMAVELVKIKTMGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISR-GVKFAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A +L+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQILKVRPDLQMVVIRGNVETRIRKLTDENLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E L +E P+ GQGA+ IE +++ ++ + NH DT +V ERA L
Sbjct: 178 FADQVSEYLPVELSLPAIGQGALGIECRLDDETIKDTIAFFNHPDTAHAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA G TL G V + DG + + +G + +G A+ +
Sbjct: 238 EGGCQVPIAAHGQVSGDTLTLTGFVASVDGTRSVKDTISGPVTECEKLGIALAEKLLADG 297
Query: 301 NKNVF 305
+
Sbjct: 298 AHEIL 302
>gi|326562302|gb|EGE12628.1| porphobilinogen deaminase [Moraxella catarrhalis 103P14B1]
gi|326563079|gb|EGE13352.1| porphobilinogen deaminase [Moraxella catarrhalis 12P80B1]
gi|326571711|gb|EGE21724.1| porphobilinogen deaminase [Moraxella catarrhalis BC8]
gi|326578075|gb|EGE27935.1| porphobilinogen deaminase [Moraxella catarrhalis O35E]
Length = 321
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|17986460|ref|NP_539094.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|237816250|ref|ZP_04595243.1| porphobilinogen deaminase [Brucella abortus str. 2308 A]
gi|17982057|gb|AAL51358.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|237788317|gb|EEP62532.1| porphobilinogen deaminase [Brucella abortus str. 2308 A]
Length = 342
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 143/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 38 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 97
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 98 TEEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 157
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 158 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 217
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 218 ITDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 277
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 278 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 337
Query: 305 FN 306
F+
Sbjct: 338 FD 339
>gi|15966832|ref|NP_387185.1| porphobilinogen deaminase [Sinorhizobium meliloti 1021]
gi|307301660|ref|ZP_07581419.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C]
gi|307316316|ref|ZP_07595760.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83]
gi|23821697|sp|Q92LH7|HEM3_RHIME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15076104|emb|CAC47658.1| Probable porphobilinogen deaminase [Sinorhizobium meliloti 1021]
gi|306898156|gb|EFN28898.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83]
gi|306903358|gb|EFN33947.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C]
Length = 309
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 156/305 (51%), Positives = 214/305 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLA+A ETR L H +PP I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLAMAQTHETRDRLAAAHGLPPEMFEIVILSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDMPTKL +GL +SA+LPREDIRD F+ +A+ L D
Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI VI +RG++ETRL KL + LLAYAG++RL
Sbjct: 121 LPQGATVGSSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V E+L+ E+FPP+P QGAIC+E + + + L+ I+ T ++V+CER FLA L
Sbjct: 181 MEHVPTELLDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H++ +G DA +G++A + IR +
Sbjct: 241 DGSCRTPIAGYAQSDGTHIRFAGMILTPDGTTSHQIEIDGRAADAERLGQEAGERIRAKA 300
Query: 301 NKNVF 305
F
Sbjct: 301 GPGFF 305
>gi|282895464|ref|ZP_06303601.1| Porphobilinogen deaminase [Raphidiopsis brookii D9]
gi|281199497|gb|EFA74360.1| Porphobilinogen deaminase [Raphidiopsis brookii D9]
Length = 322
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KG
Sbjct: 8 SRTIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E +I+ EID AVHS KD+PT L GL ++A RE+ D + H Q+L
Sbjct: 66 LFTKELELGMINQEIDFAVHSLKDLPTNLPAGLTLAAITARENPADAVVFHQNHLGQTLD 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L SVIGTSSLRR A L S + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 126 TLPPGSVIGTSSLRRLAQLRHKFSHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +IL + + GQGA+ IE N+ + ++K I H T D ER+FL
Sbjct: 186 NMHHRIHQILPPDISLHAVGQGALGIECRENDSELITILKAIEHPQTRDRCLAERSFLRS 245
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G +L GIV + +G+ + + G DA +G A +R
Sbjct: 246 LEGGCQVPIGVNTEIDGESLTLTGIVASVNGENLVKNTITGAAADAEKLGTQLANILREQ 305
Query: 300 SNKNVFN 306
+
Sbjct: 306 GATEILE 312
>gi|237756363|ref|ZP_04584911.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691477|gb|EEP60537.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 310
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 176/306 (57%), Gaps = 8/306 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A L ++H + + ++ ++T+GD+I + L +IGGKGLF
Sbjct: 2 KIRIGTRKSQLALWQANYIADRLREIHGV---EVELVKITTQGDKILDVPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S + + L +
Sbjct: 59 VKEIEDALLKNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIKHEHIYQLPEN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL +
Sbjct: 119 AVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDGK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C
Sbjct: 179 VKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCDAINIGRDAAQYIRFI 299
+ + + K ++ G + +G+ +++ + AI +G+ A+ +
Sbjct: 239 QVPLGAYCEIKENSFIITGFIADLEGREYYQEKITEQIKENTQEQAIILGKTLAEKLLND 298
Query: 300 SNKNVF 305
K +
Sbjct: 299 GGKQIL 304
>gi|330965074|gb|EGH65334.1| porphobilinogen deaminase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 313
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVHVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|170719443|ref|YP_001747131.1| porphobilinogen deaminase [Pseudomonas putida W619]
gi|229836111|sp|B1J1V2|HEM3_PSEPW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169757446|gb|ACA70762.1| porphobilinogen deaminase [Pseudomonas putida W619]
Length = 313
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFSSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEERITASISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHTDTADRVVAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGEQLWLRGLVGQPSGGTLLMADARAPRASAETLGVQVAEDLLGQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAAIL 303
>gi|67924108|ref|ZP_00517554.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501]
gi|67854033|gb|EAM49346.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501]
Length = 318
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 4 SSRAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E ++ ++D AVHS KD+PT L +GL + R + D + H + L
Sbjct: 62 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVHEKHRDKQL 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L SVIGTSSLRR A L ++ D RG + TRL KL++ + AI+LA AG++R
Sbjct: 122 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLGKLDSGEYDAIILAVAGLQR 181
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ + + GQGA+ IE +P+ EL+KV+ +T D ERAFL
Sbjct: 182 LDMSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILELLKVLEDTETRDRCYAERAFLR 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ I + + L G+V + DGK + + G A ++G+ A +R
Sbjct: 242 QLEGGCQVPIGVNTKIENNVLTLIGMVASLDGKTLIKDTIEGEPSQAESLGQTLATRLRD 301
Query: 299 ISNKNVF 305
+
Sbjct: 302 AGATEIL 308
>gi|326560715|gb|EGE11083.1| porphobilinogen deaminase [Moraxella catarrhalis 46P47B1]
Length = 321
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|113460193|ref|YP_718250.1| porphobilinogen deaminase [Haemophilus somnus 129PT]
gi|170718229|ref|YP_001785251.1| porphobilinogen deaminase [Haemophilus somnus 2336]
gi|123131907|sp|Q0I178|HEM3_HAES1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058918|sp|B0UWZ8|HEM3_HAES2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112822236|gb|ABI24325.1| hydroxymethylbilane synthase (porphobilinogen deaminase, PGB)
[Haemophilus somnus 129PT]
gi|168826358|gb|ACA31729.1| porphobilinogen deaminase [Haemophilus somnus 2336]
Length = 321
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 110/318 (34%), Positives = 165/318 (51%), Gaps = 14/318 (4%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K +I TR SPLAL A ++ L + ++ ++P+ TKGD I + L +IG
Sbjct: 1 MSINKTLKIATRQSPLALWQANYVKNRLQQRYSH--LSVELVPIITKGDVILDTPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L++GE D AVHS KD+P + KGL++S PRED RD F+S+ ++L
Sbjct: 59 GKGLFVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++GTSSLRR+ L WR+D+ + RG + TRLNKL+ AI+LA AG+ RL
Sbjct: 119 ELPQGAIVGTSSLRRQCQLKNWRADLDIRSLRGNVGTRLNKLDQGDYDAIILASAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I+ + I+ P+ GQGA+ IE V++ Q L+ + + T V ERA
Sbjct: 179 GLTERIRSFIEIDTILPACGQGAVGIECRVDDRDVQSLLMPLADQTTTYCVLAERAMNFH 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-----------RNGNRCDAINI 288
L G C+ I +A + + LY G+V G A +
Sbjct: 239 LQGGCQVPIGAYAILENNQLYLRGLVGDVHGSQILSAEGQFELSLDFESSQSAVQKAEEL 298
Query: 289 GRDAAQYIRFISNKNVFN 306
G A+ + +
Sbjct: 299 GVSIAEQLLQQGADKILQ 316
>gi|192360982|ref|YP_001983840.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107]
gi|190687147|gb|ACE84825.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107]
Length = 315
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 110/300 (36%), Positives = 170/300 (56%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A ++ L H P + ++PL+++GD+I + L ++GGKGLF
Sbjct: 8 LRIATRKSLLALWQADYVKTELERHH--PGLRVELVPLTSRGDKILDVPLAKVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L++G D AVHS KD+P + GL ++ PRED RD F+S+ SL DL +
Sbjct: 66 KELEQALLAGAADIAVHSMKDVPMEFPDGLGLAVICPREDARDAFVSNRFASLDDLPAGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ LL R D+ V RG ++TRL KL++ + AI+LA AG+ RL+ + I
Sbjct: 126 VVGTSSLRRQCQLLARRPDLQVKFLRGNVQTRLQKLDDGEYDAIILAAAGLIRLELQARI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ E P+ GQGA+ IE + + L++ ++H+ T + V ERA L G C+
Sbjct: 186 RSLIAPEVSLPAGGQGAVGIECRMQDQATLALLQPLHHQPTAEQVLAERAMNRRLQGGCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA +A +G L+ G+V A DG G + +G A+ + ++
Sbjct: 246 VPIACYALQQGGELWLRGLVGAPDGSQMLFDEIRGPVAEGEQMGIQLAERLLAAGADSIL 305
>gi|307154737|ref|YP_003890121.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822]
gi|306984965|gb|ADN16846.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822]
Length = 320
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KG
Sbjct: 7 TRTVRIGSRKSQLALVQTYWVQGELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLK 119
LFT+E+E +I +ID AVHS KD+PT L GL + R D D + H + L
Sbjct: 65 LFTKELEVGMIDHQIDLAVHSLKDLPTNLPSGLILGCVTERVDPADGLVVNEKHKDKQLD 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG+ RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLTRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +I+ E + GQGA+ IE ++ + +L+KV+ H+ T D ERAFL E
Sbjct: 185 GMSDRIHQIIPSEISLHAVGQGALGIECRADDVEVLDLLKVLEHQATRDRCYAERAFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G TL G+V + DG+ + S G DA +G++ A +R
Sbjct: 245 LEGGCQVPIGVNTSVEGDTLTLTGMVASLDGQKLIKDSITGKASDADQLGQELAIRMRNA 304
Query: 300 SNKNVF 305
+
Sbjct: 305 GAGEIL 310
>gi|326569020|gb|EGE19089.1| porphobilinogen deaminase [Moraxella catarrhalis BC1]
Length = 321
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|225628089|ref|ZP_03786124.1| porphobilinogen deaminase [Brucella ceti str. Cudo]
gi|225616914|gb|EEH13961.1| porphobilinogen deaminase [Brucella ceti str. Cudo]
Length = 342
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 143/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 38 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 97
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 98 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 157
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 158 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 217
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 218 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 277
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 278 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 337
Query: 305 FN 306
F+
Sbjct: 338 FD 339
>gi|326574375|gb|EGE24318.1| porphobilinogen deaminase [Moraxella catarrhalis CO72]
gi|326575506|gb|EGE25431.1| porphobilinogen deaminase [Moraxella catarrhalis 101P30B1]
Length = 321
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|121535332|ref|ZP_01667145.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1]
gi|121306118|gb|EAX47047.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1]
Length = 317
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 117/303 (38%), Positives = 167/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LAL A L H P + I + T GD+I + L +IGGKG
Sbjct: 2 KNKLVIGTRGSKLALWQANYIAHRLCQYH--PGLEVTIKHIVTTGDKILDVPLAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+EIE ++ GEID AVHS KDMPT+L GL ++A RE+ D IS +L L
Sbjct: 60 VFTKEIELAMLRGEIDLAVHSLKDMPTELPPGLTLAAITEREEPFDALISPKYGTLDKLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A LL R D++V D RG ++TRL KL + AI+LA AG+KRL +
Sbjct: 120 HGAKVGTSSLRRRAQLLNCRPDLTVCDLRGNVDTRLRKLETEELDAIVLAQAGLKRLGWD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + L + P+ GQGA+ +ET ++ + LV ++ EDT +V ER+FL EL+G
Sbjct: 180 DRITQQLPPDICLPAVGQGALALETRSDDSEVLALVAFLHDEDTAAAVTAERSFLNELEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + + L +L+ DG + G A ++GR AQ++ +
Sbjct: 240 GCQVPIGVYGRVENGELVLDAAILSLDGAAALKDRICGAPAAAEDLGRKLAQHMYVTGGR 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|28867368|ref|NP_789987.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|38257983|sp|Q88B91|HEM3_PSESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28850602|gb|AAO53682.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 313
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|227823724|ref|YP_002827697.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234]
gi|227342726|gb|ACP26944.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234]
Length = 309
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 157/305 (51%), Positives = 208/305 (68%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA ETR L H +PP ++ LSTKGDRIT+R L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPPEMFEVVVLSTKGDRITDRPLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDMPTKL GL +SA+LPREDIRD F+ TA L +
Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPDGLFLSAFLPREDIRDAFVGRTAPRLVE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI +RG++ETRL KL + LLA+AG+KRL
Sbjct: 121 LPEGATVGSSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V E+L+ ++FPP+P QGAICIE+ + + L+ I+ T ++V CER FLA L
Sbjct: 181 MTDVPTELLDPKEFPPAPAQGAICIESRDGDDRVNALLAAIDDPRTHEAVACERGFLATL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H V +G DA +GR A + IR +
Sbjct: 241 DGSCRTPIAGYAQSDGTYIRFSGMILTPDGATSHRVEIDGKAQDATELGRKAGEQIRDKA 300
Query: 301 NKNVF 305
F
Sbjct: 301 GPGFF 305
>gi|78778881|ref|YP_396993.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9312]
gi|123741491|sp|Q31C38|HEM3_PROM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78712380|gb|ABB49557.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. MIT
9312]
Length = 316
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 161/308 (52%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLEK--NIPNLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117
KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGQADIAVHSLKDLPTNLPSGLKLGCITKREDPADALVVSKKNDCYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L ++ D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LETLPAGSIVGTSSLRRLAQLRNKYPHLNFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSDDKKVLEIISVLEDKPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + LY G+V + DG+ + GN D +G++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSSIQNEQLYLTGMVASLDGERLIKDQYIGNIDDPEQVGKELAKKLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 LQGADKIL 306
>gi|326571836|gb|EGE21842.1| porphobilinogen deaminase [Moraxella catarrhalis BC7]
Length = 321
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 108/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + A++LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAVILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|284929513|ref|YP_003422035.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A]
gi|284809957|gb|ADB95654.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A]
Length = 318
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 5/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L + P + I +ST+GD I + L +IG K
Sbjct: 4 SNRLIRIGSRKSQLALVQTYWIQEQLQKHY--PNYEFQIETMSTQGDNILDVALAKIGDK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
GLFT+E+E ++ ID AVHS KD+PT L +GL + RE+ D + + L
Sbjct: 62 GLFTKELEVAMLQNRIDFAVHSLKDLPTNLPEGLMLGCITERENPADALVVNEKYKNNKL 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L S+IGTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 122 DTLPEGSIIGTSSLRRLAQLRHHYPYLIFKDVRGNVNTRLAKLDAGEYDAIILAAAGLKR 181
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I +I+ + + GQGA+ IE + + EL++V+ H +T ER+FL
Sbjct: 182 LNMDNRIHQIIPEDISLHAVGQGALGIECRAADSRILELLEVLKHSETHYRCMGERSFLR 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I + + L GIV + DGK + + +G+ A N+G + + +R
Sbjct: 242 ALEGGCQVPIGVTTKIECNILTLTGIVASLDGKTMLKNTVSGHMEQAENLGYELSVCLRD 301
Query: 299 ISNKNVFN 306
+ +
Sbjct: 302 AGATEILD 309
>gi|304414148|ref|ZP_07395516.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1]
gi|304283362|gb|EFL91758.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1]
Length = 312
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A R SL H P + ++P++T+GD + + L +IGG
Sbjct: 1 MSEKVIRIATRQSPLALWQADYVRKSLESHH--PDLQVKLVPITTRGDTLLHTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KD+P GL + R D D F+S + LK
Sbjct: 59 KGLFVKELEQALLENCADIAVHSIKDVPIHFPAGLGLVVICQRGDPHDAFVSKNYKHLKQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ + + + V D RG + TRLNKL+ AI+LA AG++RL
Sbjct: 119 LPPGSIVGTSSLRRQCQIRKKYPHLIVRDLRGNVGTRLNKLDQGAYQAIILAVAGLQRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ +++ E+ P+ GQGAI IE + + ++L+ +NH T + ERA L
Sbjct: 179 LQSRIQHVMSPEESLPAAGQGAIGIECRLEDDVTRQLLAPLNHFPTERRICAERALNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L V DG R G A IG D A +
Sbjct: 239 EGGCQVPIGSYAELEGDNLRLRAFVSTPDGSQMIYGERCGLAIQAEKIGLDLATELIAEG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|213971710|ref|ZP_03399816.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1]
gi|301386723|ref|ZP_07235141.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato Max13]
gi|302062167|ref|ZP_07253708.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato K40]
gi|302130377|ref|ZP_07256367.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213923528|gb|EEB57117.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1]
Length = 313
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDSADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|296112247|ref|YP_003626185.1| porphobilinogen deaminase [Moraxella catarrhalis RH4]
gi|295919941|gb|ADG60292.1| porphobilinogen deaminase [Moraxella catarrhalis RH4]
Length = 321
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|126666605|ref|ZP_01737583.1| porphobilinogen deaminase [Marinobacter sp. ELB17]
gi|126628993|gb|EAZ99612.1| porphobilinogen deaminase [Marinobacter sp. ELB17]
Length = 313
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L +H + ++ + T GD+I + L ++GG
Sbjct: 1 MSARNLRIATRSSALALWQAEFIKAELERLHS--NVTVELVKIKTLGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +GL + A R+D D FIS+ SL D
Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMAFPEGLGLVAICERDDPTDAFISNHFSSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L++V+GTSSLRR++ L R D+ + RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPLNAVVGTSSLRRESQLRANRPDLQIRVLRGNVNTRLAKLDAGNYDAIILASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + P+ GQGA+ IE +++ + + +++ +NH D+ D V ERA L
Sbjct: 179 FEARIRNCMPDTLSLPAVGQGALGIECRLDDQELRAMLEPLNHTDSADRVKAERALNTRL 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA +A + L+ G+V A DG + +R + +GR+ A+ +
Sbjct: 239 NGGCQVPIAAYALLEDNDMLWLRGLVGAVDGSLIFRAEGRVHRSEGERLGRELAEDLLAQ 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|148262442|ref|YP_001229148.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4]
gi|189028092|sp|A5GCW2|HEM3_GEOUR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146395942|gb|ABQ24575.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4]
Length = 318
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MALKTLRIGTRASQLALWQANWVKSELEK--RYPGLEVSLLKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS D
Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISR-GIKFAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL A++LA AG+KRL
Sbjct: 118 LPKGAKIGTSALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E L + P+ GQGA+ IE ++N + + + NH T +V ERA L
Sbjct: 178 FTDKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKSAIDFFNHPATAYAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F +G L G + + DGK + S +G + +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVEGDQLKLTGFIASVDGKTSVKGSVSGPAEECEKLGITLAEQLLKDG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHEIL 302
>gi|15605804|ref|NP_213181.1| porphobilinogen deaminase [Aquifex aeolicus VF5]
gi|2982966|gb|AAC06580.1| porphobilinogen deaminase [Aquifex aeolicus VF5]
Length = 323
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 114/301 (37%), Positives = 171/301 (56%), Gaps = 5/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A + L + ++ ++T GD+IT+ L +IGGKGLF
Sbjct: 21 KIRIGTRKSKLALWQANYVKDFLEKH---WGVEVELVKITTTGDKITDVPLAKIGGKGLF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L
Sbjct: 78 VKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSG 137
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E
Sbjct: 138 SVIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESE 197
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E+L EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C
Sbjct: 198 ITEVL--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + FA + TL + + + + E R GN +A +G A+ + + +
Sbjct: 256 QVPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAEELLKKGGEEI 315
Query: 305 F 305
Sbjct: 316 L 316
>gi|303230554|ref|ZP_07317308.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6]
gi|302514795|gb|EFL56783.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6]
Length = 312
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 171/304 (56%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LAL + +S L ++ P + ++ +TKGDRI N+ L E+GGKG
Sbjct: 2 RNHIRIGTRKSALALWQSEYVKSELQRLY--PGVTVELVHFNTKGDRILNKPLAEVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L
Sbjct: 60 LFTAELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL +
Sbjct: 120 EGARIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+G
Sbjct: 180 DRITQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + + + L ++ + DGK +E +G + +G++ A+ + K
Sbjct: 240 GCQVPMGVYGTVEKGQLNLKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGGK 299
Query: 303 NVFN 306
++
Sbjct: 300 HIVE 303
>gi|303229236|ref|ZP_07316032.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a]
gi|302516091|gb|EFL58037.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a]
Length = 312
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 171/304 (56%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LAL + +S L ++ P + ++ +TKGDRI ++ L E+GGKG
Sbjct: 2 RNHIRIGTRKSALALWQSEYVKSELQRLY--PGITVELVHFNTKGDRILDKPLAEVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L
Sbjct: 60 LFTAELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL +
Sbjct: 120 EGARIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+G
Sbjct: 180 DRITQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + + + L ++ + DGK +E +G + +G++ A+ + K
Sbjct: 240 GCQVPMGVYGTVEKGQLILKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGGK 299
Query: 303 NVFN 306
++
Sbjct: 300 HIVE 303
>gi|292493894|ref|YP_003529333.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4]
gi|291582489|gb|ADE16946.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4]
Length = 310
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 163/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K RI TR S LAL A +L H P ++ ++ +ST+GD+I + L ++G
Sbjct: 1 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHHPGLSVELVRMSTQGDKILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L+SGE D AVHS KD+P L + L IS RED RD F+S+ Q L
Sbjct: 59 GKGLFVKELEQGLLSGEADIAVHSMKDVPVVLPEDLHISVICEREDPRDAFVSNHWQQLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA +G+KRL
Sbjct: 119 SLPEGARVGTSSLRRQSQVRERRPDFHVLDLRGNVNTRLAKLDNNEFDGIVLAASGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E+L E P+ GQGAI IE + +EL+KV+ H T ++ ERA
Sbjct: 179 GLTDRITELLAPEVSLPAIGQGAIGIECRKGDTATEELLKVLEHTPTRTTIRAERALNER 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ IA +A G L +V DG G +A +G + +
Sbjct: 239 LAGGCQVPIAAYAELDGERLRLRALVGQPDGGKVIRGEMWGTPEEAEVLGVSLGEDLLRR 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GADKIL 304
>gi|123968087|ref|YP_001008945.1| porphobilinogen deaminase [Prochlorococcus marinus str. AS9601]
gi|158513952|sp|A2BPX7|HEM3_PROMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123198197|gb|ABM69838.1| Porphobilinogen deaminase [Prochlorococcus marinus str. AS9601]
Length = 316
Score = 382 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 100/308 (32%), Positives = 160/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLEK--NIPNLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L++L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LENLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPSEVSLHAVGQGALGIECKSDDKKVLEIISILEDKPTCQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + L G+V + DG+ + G+ D +G++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSKIQNEQLCLTGMVASLDGERLIKDQYIGDINDPEEVGKELAKKLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 QQGAEEIL 306
>gi|78044433|ref|YP_360051.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123756773|sp|Q3ACT3|HEM3_CARHZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77996548|gb|ABB15447.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 311
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK +G+R S LAL L +H P N I+ + TKGD+I + L +IG KG
Sbjct: 2 KKEVIVGSRDSALALWQTNWVVERLSKIH--PEINFKIVTMKTKGDKILDVALAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E L++ ID AVHS KD+PT L +GL+I A+ RE DVFIS +L
Sbjct: 60 LFTKELEHALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCEREYPGDVFISPKGFKFLELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR A +L R D+ I RG + TR K+ I+LAYAG+KRL E
Sbjct: 120 QGARIGTSSLRRIAQILAVRPDLQAIPLRGNLPTRFRKMEEMDLDGIILAYAGVKRLGYE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+L+ + P+ GQG+I +E ++ +EL+K I+H T ++ ERAFL L+G
Sbjct: 180 DKITEMLSFDLCLPAVGQGSIGVEIRADDTFIEELLKPIDHFATNRAIRAERAFLKRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I ++ K + L+ G+V + DGK+ + + G+ + +G A+ + +
Sbjct: 240 GCQIPIGAYSEVKENRLHLKGVVASLDGKLVIKGEKEGSIEEPEKVGISLAEELLTKGAQ 299
Query: 303 NVFN 306
+
Sbjct: 300 KILE 303
>gi|257453642|ref|ZP_05618932.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60]
gi|257449100|gb|EEV24053.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60]
Length = 319
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 10/309 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR SPLAL A ++ L ++ P + ++P+ T+GD+I + L +IGGKGLF
Sbjct: 6 TLNIATRQSPLALWQAEHIQARLQALY--PSLTVNLVPMVTQGDKILDTPLAKIGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L D AVHS KD+P L +GL + AY RE D FIS+ +SL L
Sbjct: 64 VKELEQALYEKRADIAVHSLKDVPMVLPEGLTLGAYCEREQPTDAFISNHYESLDALPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+ + ++R D+ +I RG + TRL+KL+ + AI+LA +G+ RL
Sbjct: 124 AKLGTSSLRRQCQIQQYRPDLEIISLRGNVGTRLSKLDAGEYDAIILATSGLTRLGLTDR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L+ P+ GQGA+ IE ++ L+K +N E + V ERA L G C
Sbjct: 184 IRHELDTHISLPAVGQGALAIECRSDDADVLALLKPLNDEPSRLCVMAERAMNRHLQGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--------AINIGRDAAQYI 296
+ IAGFA + ++ G V + DGK + + D A +G A+ +
Sbjct: 244 QVPIAGFATIQDGQIHLQGRVGSVDGKTLLKAEHHNALVDDARESQQIAEAVGVVVAEAL 303
Query: 297 RFISNKNVF 305
+
Sbjct: 304 IAQGADKIL 312
>gi|332706560|ref|ZP_08426621.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L]
gi|332354444|gb|EGJ33923.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L]
Length = 322
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L P + +ST GD+I + L++IG KGL
Sbjct: 10 RTIRIGSRKSQLALIQTYWVQEQLKK--HFPDREFEVQTMSTHGDKILDVALSKIGDKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
FT+E+E ++ EID AVHS KD+PT+L +GL + RE+ D + H + ++
Sbjct: 68 FTKELELGMLRDEIDFAVHSLKDLPTRLPEGLVLGCVTERENPADALVMHQKHLDKQIET 127
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S+IGTSSLRR A L +S D RG + TRL KL+ A++LA AG+KRL
Sbjct: 128 LPEGSIIGTSSLRRLAQLRYHFPHLSFKDVRGNLNTRLAKLDAGDYDALILAVAGLKRLD 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL E + GQGA+ IE ++ + EL+ I H T ER+ L L
Sbjct: 188 MSDRIHQILPPEISLHAVGQGALGIECREDDQEVLELLNAIAHPPTAQRCYAERSLLRAL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +G+TL IV + DG+ + + G + A N+G + A+ ++
Sbjct: 248 EGGCQVPIGVDTQLEGNTLTLTAIVASVDGQKLVKDTIQGEQSQAENLGLELAEQLKKQG 307
Query: 301 NKNVF 305
+ +
Sbjct: 308 AQEIL 312
>gi|254435152|ref|ZP_05048659.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27]
gi|207088263|gb|EDZ65535.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27]
Length = 314
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IG
Sbjct: 5 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIG 62
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L
Sbjct: 63 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL
Sbjct: 123 SLPEGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRL 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A
Sbjct: 183 ELTQRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNAR 242
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ IAG+A + L +V DG G +A ++G + +
Sbjct: 243 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGEAESLGASLGEDLLRR 302
Query: 300 SNKNVF 305
+
Sbjct: 303 GADKIL 308
>gi|298493147|ref|YP_003723324.1| porphobilinogen deaminase ['Nostoc azollae' 0708]
gi|298235065|gb|ADI66201.1| porphobilinogen deaminase ['Nostoc azollae' 0708]
Length = 322
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL
Sbjct: 9 RPIRIGSRKSQLALVQTYWVQEQLQK--SFPNITFEVHTMSTQGDKILDVALAKIGDKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKD 120
FT+E+E ++I+ EID AVHS KD+PT L +GL ++A RE+ D + H ++
Sbjct: 67 FTKELELRMINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVLHKKHKDQQIET 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 127 LPAGAVIGTSSLRRLAQLRYKFPHFTFKDVRGNLITRIGKLDAGEYDALILAVAGLERLD 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL + + GQGA+ IE ++ + L+K I H T D ER+FL L
Sbjct: 187 MSHRIDQILPPDISLHAVGQGALGIECRSDDTEVISLLKAIEHSQTRDRCLAERSFLRVL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I L G+V + DG+ + + G DA +G A+ +R
Sbjct: 247 EGGCQVPIGVDTQINSKELTLKGLVASVDGQKLVKDTVTGTAADAEKLGAQLARILRQKG 306
Query: 301 NKNVFN 306
+
Sbjct: 307 ATEILE 312
>gi|157412912|ref|YP_001483778.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215]
gi|167008816|sp|A8G3L1|HEM3_PROM2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157387487|gb|ABV50192.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215]
Length = 318
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 158/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLDVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVSKKNDYYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + LY G+V + DGK + GN + +G + A+ ++
Sbjct: 239 RELEGGCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 LQGADKIL 306
>gi|331018514|gb|EGH98570.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 313
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT + ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRLIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|307546845|ref|YP_003899324.1| porphobilinogen deaminase [Halomonas elongata DSM 2581]
gi|307218869|emb|CBV44139.1| porphobilinogen deaminase [Halomonas elongata DSM 2581]
Length = 380
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 166/304 (54%), Gaps = 4/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LA+ A R LM+VH P + ++ LST+GD+I + L ++GGKGL
Sbjct: 72 QTLRIATRKSQLAMWQAEHVRDRLMEVH--PELTVELVALSTRGDQILDTPLAKVGGKGL 129
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++ G D AVHS KD+P + + L +S L + D F+S+ SL +L
Sbjct: 130 FVKELEEAMLDGRADIAVHSMKDVPMQFPESLGLSVILAGAEPTDAFVSNQYASLDELPE 189
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRR + R D+ V++ RG ++TRL KL+N + AILLA AG+KRL E+
Sbjct: 190 GARIGTSSLRRGLQMRERRPDLEVLNLRGNVQTRLGKLDNGEFDAILLATAGLKRLGLEE 249
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + L E P+ GQGA+ IE +++ + L+ ++ DT V ERA L+G
Sbjct: 250 RITQELPPEICLPACGQGALGIECRMHDAELIGLLAPLDDPDTATRVRAERAMNTRLEGG 309
Query: 244 CKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG A + TL+ +V +G G+ + +G A+ +
Sbjct: 310 CQVPIAGHAVFENDGQTLWLRALVGNPEGTEVLRAEGRGSIHEPEALGIRVAEELLDQGA 369
Query: 302 KNVF 305
++
Sbjct: 370 GDIL 373
>gi|118592006|ref|ZP_01549400.1| porphobilinogen deaminase [Stappia aggregata IAM 12614]
gi|118435302|gb|EAV41949.1| porphobilinogen deaminase [Stappia aggregata IAM 12614]
Length = 303
Score = 381 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 143/299 (47%), Positives = 195/299 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A ETR LM H + + I+ + T GDRI +R L+E+GGKGLFT
Sbjct: 1 MRIGTRGSALALAQAHETRDRLMAAHGLAEDSFEIVVIKTSGDRIQDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L DL +
Sbjct: 61 KEIEEALLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLTDLPHGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL A LLA AG++RL E I
Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGAVDATLLAAAGLRRLGLEAEI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L + F P+ GQGAICIE+ ++ E++ I+ E T ++ ERAFLA LDGSC+
Sbjct: 181 TSLLETDQFLPAVGQGAICIESRADDTATLEMLAAIHDEATQIRLDAERAFLAVLDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I G A G TL+F GIVL DG HE + +G + DA+ IGR + ++ +
Sbjct: 241 TPIGGLATLDGDTLHFRGIVLKPDGSEVHEATASGLKSDAVQIGRSVGEDLKSCMGPDF 299
>gi|329898164|ref|ZP_08272361.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088]
gi|328920873|gb|EGG28310.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088]
Length = 307
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 164/305 (53%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I TR SPLAL A + +L H P + ++ ++++GD++ + L +IGG
Sbjct: 1 MAK--IVIATRESPLALWQAHYVKDALEMAH--PGLAVELLGMTSRGDQLLDSPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RE D F+S+T +S+
Sbjct: 57 KGLFVKELETALLEGRADIAVHSMKDVPMSFPEGLCLGPICEREAPNDAFVSNTYESIDA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L +R D+ V RG + TRL KL++ + AI+LA AG+
Sbjct: 117 LPKGAIVGTSSLRRECQLRSYRPDLVVNFLRGNVNTRLAKLDDGQYDAIILAAAGLILFG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE ++ ++L++V++H T V ERA L
Sbjct: 177 FEDRIRSRLTPEQSLPAGGQGAVGIELRSDDEPTRDLIQVLHHPKTAAEVTAERALNQTL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F +G TL+ G+V A DG G DA +G+ A +
Sbjct: 237 NGGCQVPIAAFCVTEGDTLWLRGLVGAVDGSSILRAEARGKVEDAEVLGQQVANELLNQG 296
Query: 301 NKNVF 305
+ +
Sbjct: 297 AEAIL 301
>gi|158337071|ref|YP_001518246.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017]
gi|158307312|gb|ABW28929.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017]
Length = 314
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 150/304 (49%), Gaps = 5/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL + L P + + +ST+GD I + L +IG KGLFT
Sbjct: 2 IRIGSRKSQLALVQTHWVQGELQK--HFPEYEFEVCTMSTQGDNILDVALAKIGDKGLFT 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E ++ E D AVHS KD+PT L +GL + R D D + H A L L
Sbjct: 60 KELEVSMLRKETDLAVHSLKDLPTNLPEGLCLGVVTERVDPADALVVHENFKAYQLDTLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L + D RG + TRL KL+ + I+LA AG++RL
Sbjct: 120 EGAVIGTSSLRRLAQLRYNYPHLEFKDIRGNLNTRLQKLDEGEYDGIILAVAGLQRLGFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +++ + GQGA+ IE + + +K + HE + ER+FL EL+G
Sbjct: 180 DRIHQVIPANISLHAVGQGALGIECREGDEEIMAFIKALEHEPSAHRCTAERSFLHELEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I K L G+V + DGK + + +G A +G D AQ +R +
Sbjct: 240 GCQVPIGVNTSLKEGQLTLVGMVASLDGKRLIKDTVSGPIASATQLGIDLAQKVREQGAQ 299
Query: 303 NVFN 306
+
Sbjct: 300 EILE 303
>gi|126695860|ref|YP_001090746.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301]
gi|158513419|sp|A3PBM0|HEM3_PROM0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|126542903|gb|ABO17145.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301]
Length = 316
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLIFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINILEDKPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + L G+V + DG+ + GN D IG++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSNIQNEKLCLTGMVASLDGERLIKDQHIGNINDPEEIGKELAKKLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 QQGAEEIL 306
>gi|220933221|ref|YP_002512120.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|254800261|sp|B8GSU8|HEM3_THISH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219994531|gb|ACL71133.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 316
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 166/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLA+ A + + H P + ++ ++T+GDRI + L ++GG
Sbjct: 1 MPLDTLRIATRKSPLAVWQAEHVAALVKARH--PGVRVELVGMTTQGDRILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +L +GL + L RED RD F+S+T +SL +
Sbjct: 59 KGLFVKELETGLLEGRADIAVHSMKDVPMELPEGLCLPVILDREDPRDAFVSNTFKSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ L ++D RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPRDARVGTSSLRRQCQLRHDHPHFQILDLRGNVNTRLAKLDAGEFDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E P+ GQGAI IE N+P+ L+ ++ DT V ERA A L
Sbjct: 179 FEVRIASEITPEQSLPAIGQGAIGIECRENDPEVMALIGSLDDPDTHVRVAAERAMNARL 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IAG+A TL G+V DG + +G R +A +GR A +
Sbjct: 239 NGGCQVPIAGYAELTDADTLRLRGLVGEPDGSLILRAELSGPRAEAEALGRAVADLLLHE 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAGPIL 304
>gi|77164030|ref|YP_342555.1| porphobilinogen deaminase [Nitrosococcus oceani ATCC 19707]
gi|76882344|gb|ABA57025.1| hydroxymethylbilane synthase [Nitrosococcus oceani ATCC 19707]
Length = 310
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IG
Sbjct: 1 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L
Sbjct: 59 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL
Sbjct: 119 SLPEGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A
Sbjct: 179 ELTQRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNAR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ IAG+A + L +V DG G +A ++G + +
Sbjct: 239 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGEAESLGASLGEDLLRR 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GADKIL 304
>gi|295399407|ref|ZP_06809389.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius
C56-YS93]
gi|312110034|ref|YP_003988350.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1]
gi|294978873|gb|EFG54469.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311215135|gb|ADP73739.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1]
Length = 310
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P + + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWVIEQLRQLGA--PFEFEVKEIVTKGDKILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE +++ EID AVHS KDMP L GL I PRED RDV IS ++ DL
Sbjct: 60 FVKEIEHAMLNNEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHRDVLISKNKETFADLPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+V+GTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 120 GAVVGTSSLRRSAQLLAKRPDLTIKWIRGNIDTRLAKLQTEDYDAIVLAAAGLVRMGWAS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L + P+ GQGA+ +E ++ + +E ++ +N DT +V ERAFL +L+G
Sbjct: 180 DVITEYLATDVCLPAVGQGALAVECRESDEELREWLQKLNDIDTERAVYAERAFLRQLEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A+ + + +V + DGK ++ + +G+ D N+G AA +
Sbjct: 240 GCQVPIAGYAHVNNQNDIVLTALVASPDGKELYKETVSGS--DPENVGTTAADLLIKRGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KALID 302
>gi|238897905|ref|YP_002923584.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259647800|sp|C4K4E3|HEM3_HAMD5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229465662|gb|ACQ67436.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 309
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+ TR SPLAL A ++ L H P ++++P+ T+GD I L++ GG
Sbjct: 1 MSNNMIRLATRQSPLALWQAHYVKTGLEFFH--PDLKVILLPMVTQGDNILGTALSKTGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KDMP +GL + A RED RD F+S +
Sbjct: 59 KGLFVKELERAVLDNRADIAVHSIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + I V D RG + RL KL+ AI+LA AG+KRL
Sbjct: 119 LPEGSVVGTSSLRRQCQLYKNYPGIVVRDLRGNVGARLKKLDQGDYDAIVLAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + +IL E P+ GQGAI IE +++ + V +NH + ++CERA L L
Sbjct: 179 LENRMTQILRPETSLPAAGQGAIGIECRLDDTVTLQRVATLNHRPSQLKISCERALLKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ I +A + L+ V A DG++ + R GN A IG + A +
Sbjct: 239 EGGCQTPIGSYAEIENDELWLRAFVGAPDGQLIIDGERRGNFDSAEKIGFELANELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|300115116|ref|YP_003761691.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113]
gi|299541053|gb|ADJ29370.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113]
Length = 314
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 166/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K RI TR S LAL A ++L H P ++ ++ +ST+GD+I + L +IG
Sbjct: 5 MSAKTCLRIATRKSLLALWQAEYVANTLR--HHYPDLSVELVRMSTQGDKILDTPLAKIG 62
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L
Sbjct: 63 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA AG+KRL
Sbjct: 123 SLPEGARLGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDGIILATAGLKRL 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A
Sbjct: 183 ELTHRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITLQAERALNAR 242
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ IAG+A + L +V DG G DA ++G + +
Sbjct: 243 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGDAESLGASLGEDLLRR 302
Query: 300 SNKNVF 305
+
Sbjct: 303 GADKIL 308
>gi|239833011|ref|ZP_04681340.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301]
gi|239825278|gb|EEQ96846.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301]
Length = 314
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 149/302 (49%), Positives = 195/302 (64%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ETR LM+ H +P I I+P+ST GDRI +R L+EIGGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIVPMSTAGDRIQDRALSEIGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL
Sbjct: 70 TEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E+++ E F P+PGQGAI IET + + + L+ + H +T ++ CERAFLA LDGSC
Sbjct: 190 ITELVDPESFLPAPGQGAIGIETRIGDTRIDALLAPLAHRETGIALACERAFLAALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G + F+G++L DG HE+ G +A +GR+AA+ IR +
Sbjct: 250 RTPIAGLATVDGDRVSFHGMILKPDGSEAHEIRAEGPVSNAAALGREAAERIRAKAGPQF 309
Query: 305 FN 306
F
Sbjct: 310 FE 311
>gi|12655813|gb|AAK00605.1|AF221100_2 porphobilinogen deaminase [Selenomonas ruminantium subsp.
ruminantium]
Length = 313
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 170/307 (55%), Gaps = 3/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K IGTR S LAL A + L + + P + + ++TKGD+I + L +IGG
Sbjct: 1 MKKDTIVIGTRSSKLALWQAEYVKGRLEE--EYPGLKVELKLMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SG ID AVHS KDMPT+L +GL ++A R D D +S ++
Sbjct: 59 KGLFTKELEMDMLSGGIDLAVHSLKDMPTELPEGLTLAAITKRFDPGDAVVSPKFKTFAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRKA LL R D+++ D RG + TRL KL + AI+LA AG+KRL
Sbjct: 119 LPCGAKVGTSSLRRKAQLLHARPDLNICDLRGNVNTRLAKLESENFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E+L + P+ GQGA+ IET ++ +E++ +N E T ERAFL +
Sbjct: 179 FGERITEVLPRDMVLPAVGQGALAIETREDDADMREMLAFLNDEATVHCAKAERAFLGRV 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A + ++ + DG+ + +G +A +G A+ +
Sbjct: 239 EGGCQVPVGVYAVPAANDEIQVEAVIASLDGQRLYRDKLSGKASEAEKLGVTLAEKLLAA 298
Query: 300 SNKNVFN 306
+ +
Sbjct: 299 GGQKILQ 305
>gi|150398163|ref|YP_001328630.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419]
gi|150029678|gb|ABR61795.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419]
Length = 330
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 152/305 (49%), Positives = 208/305 (68%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA ETR L H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 22 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPVEMFEIVTLSTKGDRITDRSLAEIGG 81
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDM TKL GL +SA+LPRED+RD F+ +A L +
Sbjct: 82 KGLFTEELEQQLLSGDLDFAVHSSKDMTTKLPDGLFLSAFLPREDVRDAFVGRSATRLAE 141
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R D++VI +RG++ETRL KL + LLAYAG++RL
Sbjct: 142 LPQGATVGSSSLRRQALIRRLRPDVNVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 201
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V E+L+ E FPP+P QGAICIE + + + L+ ++ T ++V+CER FLA L
Sbjct: 202 MAHVPTELLDPESFPPAPAQGAICIEARLGDDRINALLSAVDDPRTHEAVSCERGFLATL 261
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H + +G DA +GR+A + IR +
Sbjct: 262 DGSCRTPIAGYAQSDGARIRFSGMILTPDGTTCHRIETDGRTADAAALGREAGERIRAKA 321
Query: 301 NKNVF 305
F
Sbjct: 322 GPEFF 326
>gi|226946767|ref|YP_002801840.1| porphobilinogen deaminase [Azotobacter vinelandii DJ]
gi|226721694|gb|ACO80865.1| porphobilinogen deaminase [Azotobacter vinelandii DJ]
Length = 314
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 5 REIRIATRKSALALWQAEYVKARLEQAH--PGLAVSLVPMVSRGDKLLDAPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L
Sbjct: 63 FVKELETALLENAADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNAFASLDELPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S+IGTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL E
Sbjct: 123 GSLIGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEG 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + I D P+ GQGA+ IE + + Q L+ ++H T V ERA L+G
Sbjct: 183 RIRSRIAIADSLPAGGQGAVGIECRSADREIQALLAPLDHAPTALRVGAERALNKRLNGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA +A + L+ G+V DG++ +A +G A+ + +
Sbjct: 243 CQVPIACYAELEDGQLWLRGLVGQPDGRLLLRAEARAPADEAEALGVRVAEALLAQGAQR 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|254525987|ref|ZP_05138039.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202]
gi|221537411|gb|EEE39864.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202]
Length = 318
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 104/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLDVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPTGLKLGCITKREDPADALVVSKKNDCYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + LY G+V + DGK + GN + +G + A+ ++
Sbjct: 239 RELEGGCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLK 298
Query: 298 FISNKNVF 305
F +
Sbjct: 299 FQGADKIL 306
>gi|306844857|ref|ZP_07477440.1| porphobilinogen deaminase [Brucella sp. BO1]
gi|306274789|gb|EFM56570.1| porphobilinogen deaminase [Brucella sp. BO1]
Length = 314
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 143/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGSLDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGAVSDAAALGTDAANRVRAMAGPHF 309
Query: 305 FN 306
F+
Sbjct: 310 FD 311
>gi|11467957|sp|O66621|HEM3_AQUAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 304
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 114/301 (37%), Positives = 171/301 (56%), Gaps = 5/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A + L + ++ ++T GD+IT+ L +IGGKGLF
Sbjct: 2 KIRIGTRKSKLALWQANYVKDFLEKH---WGVEVELVKITTTGDKITDVPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L
Sbjct: 59 VKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E
Sbjct: 119 SVIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESE 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E+L EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C
Sbjct: 179 ITEVL--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 236
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + FA + TL + + + + E R GN +A +G A+ + + +
Sbjct: 237 QVPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAEELLKKGGEEI 296
Query: 305 F 305
Sbjct: 297 L 297
>gi|222054398|ref|YP_002536760.1| porphobilinogen deaminase [Geobacter sp. FRC-32]
gi|254800252|sp|B9M416|HEM3_GEOSF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|221563687|gb|ACM19659.1| porphobilinogen deaminase [Geobacter sp. FRC-32]
Length = 318
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MALKQLRIGTRASQLALWQANWVKSELEQ--RYPGMEVSLVKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS D
Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISR-GTKFAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL K A++LA AG+KRL
Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDMEMVIIRGNVETRINKLETEKLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E L + P+ GQGA+ IE ++N + ++ + NH T +V ERA L
Sbjct: 178 FTEKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKQTIDFFNHPATAYAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F GS L G + + DGK + G D +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVTGSDLKLVGFIASVDGKTSVRGTITGPAADCEKLGIKLAEQLLADG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHAIL 302
>gi|306842959|ref|ZP_07475593.1| porphobilinogen deaminase [Brucella sp. BO2]
gi|306286887|gb|EFM58412.1| porphobilinogen deaminase [Brucella sp. BO2]
Length = 314
Score = 379 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 143/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309
Query: 305 FN 306
F+
Sbjct: 310 FD 311
>gi|62290744|ref|YP_222537.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941]
gi|82700655|ref|YP_415229.1| porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308]
gi|189024957|ref|YP_001935725.1| porphobilinogen deaminase [Brucella abortus S19]
gi|225853324|ref|YP_002733557.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457]
gi|254690032|ref|ZP_05153286.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|254694521|ref|ZP_05156349.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|254696146|ref|ZP_05157974.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|254731064|ref|ZP_05189642.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|256045496|ref|ZP_05448379.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|256112222|ref|ZP_05453143.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|256258286|ref|ZP_05463822.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|256263189|ref|ZP_05465721.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9]
gi|260546007|ref|ZP_05821747.1| porphobilinogen deaminase [Brucella abortus NCTC 8038]
gi|260562805|ref|ZP_05833291.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|260755568|ref|ZP_05867916.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|260758791|ref|ZP_05871139.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|260760515|ref|ZP_05872858.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884592|ref|ZP_05896206.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|261214839|ref|ZP_05929120.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|265991918|ref|ZP_06104475.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|265993649|ref|ZP_06106206.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|297247130|ref|ZP_06930848.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196]
gi|23821695|sp|Q8YJB0|HEM3_BRUME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|75496218|sp|Q57B08|HEM3_BRUAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123768401|sp|Q2YLM5|HEM3_BRUA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058730|sp|B2S842|HEM3_BRUA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800235|sp|C0RFD1|HEM3_BRUMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|62196876|gb|AAX75176.1| HemC, porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941]
gi|82616756|emb|CAJ11843.1| Porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308]
gi|189020529|gb|ACD73251.1| Porphobilinogen deaminase [Brucella abortus S19]
gi|225641689|gb|ACO01603.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457]
gi|260096114|gb|EEW79990.1| porphobilinogen deaminase [Brucella abortus NCTC 8038]
gi|260152821|gb|EEW87913.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|260669109|gb|EEX56049.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|260670947|gb|EEX57768.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675676|gb|EEX62497.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|260874120|gb|EEX81189.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|260916446|gb|EEX83307.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|262764630|gb|EEZ10551.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|263002984|gb|EEZ15277.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093111|gb|EEZ17246.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9]
gi|297174299|gb|EFH33646.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196]
gi|326539601|gb|ADZ87816.1| porphobilinogen deaminase [Brucella melitensis M5-90]
Length = 314
Score = 379 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 143/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 190 ITDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309
Query: 305 FN 306
F+
Sbjct: 310 FD 311
>gi|254447439|ref|ZP_05060905.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015]
gi|198262782|gb|EDY87061.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015]
Length = 313
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 168/304 (55%), Gaps = 4/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR SPLAL A + + L + P +I ++ ++TKGD+I + L +IGGKGL
Sbjct: 2 KTLRIATRQSPLALWQAEDVAAKLKAHY--PDLDIELVKMTTKGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
F +E+E ++ G D AVHS KD+P ++ +GL +S L RED RD F+S+ SL +L
Sbjct: 60 FIKELEVGMLEGRADIAVHSMKDVPVDSEFPEGLHLSVILEREDPRDAFVSNRYNSLDEL 119
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT+SLRR+ +L + RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 120 PEGAVVGTASLRRQCQVLGRYPHLKTAVLRGSVGTRLGKLDDGQFDAIVLASAGLMRLGL 179
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I L E P+ GQGA+ IE ++ + +L+ + DT + ERA A L
Sbjct: 180 EERITAKLPPEISLPAIGQGAVGIECRKDDTELNKLLAPLADRDTTTRLKAERALNARLQ 239
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A +G L G+V A DG + R G R A +IG A+ +
Sbjct: 240 GGCQVPIAGYAELEGDQLSMRGLVGAPDGSKLYTSERRGPRDQAADIGLAVAEDLLSQGA 299
Query: 302 KNVF 305
V
Sbjct: 300 NAVL 303
>gi|163757401|ref|ZP_02164490.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43]
gi|162284903|gb|EDQ35185.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43]
Length = 312
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 159/305 (52%), Positives = 209/305 (68%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ KP+RIGTR SPLALA A ETR LM H +P I+ LSTKGDRIT+R L EIGGK
Sbjct: 5 QMKPYRIGTRGSPLALAQAHETRERLMAAHDLPESAFEIVVLSTKGDRITDRPLAEIGGK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEE+E++L G +D AVHS+KDMPT L +GL I YL RED RD +IS A L+DL
Sbjct: 65 GLFTEELEEQLSDGRLDLAVHSSKDMPTALPEGLGIVTYLEREDPRDAYISSAAPRLEDL 124
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+G+SSLRR+AL+ R R DISVI FRG ++TRL KL + + HA +LA+AG+KRL K
Sbjct: 125 PQKAVVGSSSLRRQALIRRLRPDISVITFRGLVDTRLRKLADGEVHATMLAFAGLKRLGK 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+V+ +++ E FPP+PGQGAICIE +++ + EL+ I+H DT ++NCER FL LD
Sbjct: 185 SEVVTNLMDPESFPPAPGQGAICIEARLDDERIAELLAPIDHADTHAALNCERGFLGALD 244
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A + + FYG++L DG FH++ G DA +G DA +R +
Sbjct: 245 GSCRTPIAGHATLENGQVSFYGMILTPDGTTFHDIRVQGPAADAAQLGADAGAEVRARAG 304
Query: 302 KNVFN 306
F
Sbjct: 305 SKFFE 309
>gi|170078218|ref|YP_001734856.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002]
gi|169885887|gb|ACA99600.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002]
Length = 321
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ RIG+R S LAL + R L + P + + T+GD++ + L++IG K
Sbjct: 7 SKRTVRIGSRKSQLALVQTYWVRDELQKAY--PEITFEVQTMETQGDKVLDVALSKIGDK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
GLFT+E+E ++ GE D AVHS KD+PT L +GL + R D D + H + L
Sbjct: 65 GLFTQELEDGMLKGETDFAVHSLKDLPTNLPEGLMLGCVTERVDPADALVVNEKHRDKKL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ L SVIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++R
Sbjct: 125 ETLPSGSVIGTSSLRRLAQLRHHFPHLEFKDIRGNVNTRLAKLDRGEYDAIILAAAGLQR 184
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFL 237
L I +I++ + + GQGA+ IE + + L++ + H ++ D ER+FL
Sbjct: 185 LDFGDRIHQIISSDISLHAVGQGALGIECRDGDEEILGLLRPVLEHAESRDRCYAERSFL 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+L+G C+ I +G L G+V + DG+ +G+R DA +G + AQ
Sbjct: 245 RQLEGGCQVPIGVNTTIEGDRLTLVGMVASLDGQTLIRDEVSGSRADAEKLGIELAQKAI 304
Query: 298 FISNKNVF 305
+
Sbjct: 305 AQGADKIL 312
>gi|23502739|ref|NP_698866.1| porphobilinogen deaminase [Brucella suis 1330]
gi|161619804|ref|YP_001593691.1| porphobilinogen deaminase [Brucella canis ATCC 23365]
gi|163843911|ref|YP_001628315.1| porphobilinogen deaminase [Brucella suis ATCC 23445]
gi|254704902|ref|ZP_05166730.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|254707583|ref|ZP_05169411.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|254708880|ref|ZP_05170691.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|256030406|ref|ZP_05444020.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
gi|256059864|ref|ZP_05450051.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|256158389|ref|ZP_05456287.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|256253808|ref|ZP_05459344.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|256370288|ref|YP_003107799.1| porphobilinogen deaminase [Brucella microti CCM 4915]
gi|260169315|ref|ZP_05756126.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|260567624|ref|ZP_05838094.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40]
gi|261220941|ref|ZP_05935222.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|261315070|ref|ZP_05954267.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|261316373|ref|ZP_05955570.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|261323834|ref|ZP_05963031.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|261755596|ref|ZP_05999305.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|261758828|ref|ZP_06002537.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|265987445|ref|ZP_06100002.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
gi|265996901|ref|ZP_06109458.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|38258150|sp|Q8FYI6|HEM3_BRUSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189042875|sp|A9M8M2|HEM3_BRUC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189042876|sp|B0CID9|HEM3_BRUSI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23348756|gb|AAN30781.1| porphobilinogen deaminase [Brucella suis 1330]
gi|161336615|gb|ABX62920.1| porphobilinogen deaminase [Brucella canis ATCC 23365]
gi|163674634|gb|ABY38745.1| porphobilinogen deaminase [Brucella suis ATCC 23445]
gi|256000451|gb|ACU48850.1| porphobilinogen deaminase [Brucella microti CCM 4915]
gi|260157142|gb|EEW92222.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40]
gi|260919525|gb|EEX86178.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|261295596|gb|EEX99092.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|261299814|gb|EEY03311.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|261304096|gb|EEY07593.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|261738812|gb|EEY26808.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|261745349|gb|EEY33275.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|262551369|gb|EEZ07359.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|264659642|gb|EEZ29903.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
Length = 314
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 143/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309
Query: 305 FN 306
F+
Sbjct: 310 FD 311
>gi|116750623|ref|YP_847310.1| porphobilinogen deaminase [Syntrophobacter fumaroxidans MPOB]
gi|158512355|sp|A0LN73|HEM3_SYNFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|116699687|gb|ABK18875.1| hydroxymethylbilane synthase [Syntrophobacter fumaroxidans MPOB]
Length = 309
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR S LAL + ++++ + P + + + T GD+I + L ++GG
Sbjct: 1 MTDRVIRIGTRGSMLALKQSGNVKAAMEAL--WPGLRVELQVVRTTGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE L++ +D AVHS KD+P L +GL+I A RED RDV ++ T + + D
Sbjct: 59 KGLFVKEIEDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIAD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + + + R DI + + RG IETRL KL AI+LA AG+ R+
Sbjct: 119 LPMGGRVGTSSLRRASQIRKLRPDIEIANLRGNIETRLRKLTEGAFDAIILAAAGLHRMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + L+ DF P+ GQGAI IE ++ + +EL+ ++ DT +V ER+ L L
Sbjct: 179 WQNRVTSYLDPADFLPAIGQGAIGIELRCDDGEVRELLAPLHDPDTHVAVEAERSLLRTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I G A+ TL G+V + DG+ SR G+ A IGRD +
Sbjct: 239 EGGCQVPIGGHAHLVDGTLTLSGMVASIDGEELFRASRAGSPAQARKIGRDVGMELLDSG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARRILE 304
>gi|496214|gb|AAA18907.1| porophorbilinogen deaminase [Pseudomonas aeruginosa]
Length = 314
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 111/307 (36%), Positives = 165/307 (53%), Gaps = 3/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + RI TR S LAL A S+ L H P + ++P++++GD++ + L +IG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVNSTGLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 GKGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L SV+GTS L R+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 QLPAGSVVGTSRLGRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGVIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA
Sbjct: 179 GFESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IA +A +G L+ G+V DG DA +G A+ +
Sbjct: 239 LNGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLADAEALGVRVAEDLLEQ 298
Query: 300 SNKNVFN 306
+ +
Sbjct: 299 GAEAILE 305
>gi|46201306|ref|ZP_00208053.1| COG0181: Porphobilinogen deaminase [Magnetospirillum
magnetotacticum MS-1]
Length = 315
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 134/311 (43%), Positives = 183/311 (58%), Gaps = 4/311 (1%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLT 56
M K RIGTR SPLALA ETR L I I + T GD I +R L
Sbjct: 1 MTAKLPILRIGTRGSPLALAQTHETRDRLAAAWAPLGQEGAIDIEVIKTTGDLIQDRPLA 60
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
EIGGKGLFT+E+++ ++SG I AVHS KD+PT L G+ + LPRED+RD FIS A
Sbjct: 61 EIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTLLPDGIVLPCILPREDVRDAFISLKAA 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
SL DL +V+GTSSLRR A +L R D+ V++FRG ++TRL KL+ A +LA AG+
Sbjct: 121 SLADLPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLDEGVVDATMLAMAGL 180
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+RL + L+ +D P+ QGAI I ++ A + +N D++ V ERAF
Sbjct: 181 RRLGLAGHVTSALSEDDMLPAVAQGAIGITCRADDEAAHAFLAALNCPDSFVRVAAERAF 240
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L LDGSC++ IA A G L F G++++ DG H SR+G+R DA +G+DAA+ +
Sbjct: 241 LTRLDGSCRTPIAALAVLDGDHLSFRGLIVSPDGTAIHATSRSGSRSDAEAMGKDAAEEL 300
Query: 297 RFISNKNVFNF 307
++ F+
Sbjct: 301 IKVAGPGFFDL 311
>gi|220904556|ref|YP_002479868.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868855|gb|ACL49190.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 159/305 (52%), Gaps = 3/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ I TR S LAL A +S L + P I + + TKGD I + L ++GGKG
Sbjct: 2 RNTLTIATRGSRLALWQAEHVKSCLQAIR--PGLEIRLNVIKTKGDIILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L++GE D AVHS KD+P +L +GL + PRED D +SH S+ L
Sbjct: 60 LFVKEIEEALLNGEADLAVHSMKDVPMELPEGLILGCVPPREDPTDCLLSHKYDSVAALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ +GTSSLRR++ LL R D+ + RG ++TRL KL AI+LA AG+KRL
Sbjct: 120 PNACVGTSSLRRQSQLLAQRPDLRIESLRGNVDTRLRKLQEGMYDAIILASAGLKRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L+ F P+ GQGA+ IE N+ + L+ + T V ER FLA L+G
Sbjct: 180 APHMHALDPHTFLPAVGQGALGIECRENDYELFTLLAEMEDSATRVCVEAERGFLAGLEG 239
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG A TL G+V DG S++G+ A G + A I
Sbjct: 240 GCQVPIAGHARLLDDDTLRLEGLVAEVDGSRILRCSKDGHTSQARRWGLELAGEILEQGG 299
Query: 302 KNVFN 306
K +
Sbjct: 300 KGILE 304
>gi|291279209|ref|YP_003496044.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1]
gi|290753911|dbj|BAI80288.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1]
Length = 305
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K IGTR S LAL A +S + H ++ + + T GD+I + L +IGG
Sbjct: 1 MNK--LVIGTRGSKLALWQANHIKSLIESTHH---IDVELKIIKTTGDKILDTPLAKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE++L++ +D AVHS KD+P +L GL++ + RE+ D F+S SL +
Sbjct: 56 KGLFVKEIEEELLNKNVDIAVHSMKDVPVELPDGLEVGVFPVREEPYDAFLSVKYNSLDE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRRK L+R + + D RG ++TR+ KL + AI+LA AG+KRL
Sbjct: 116 LPDGAVIGTSSLRRKIQLMRKYPHLVIKDLRGNVDTRIRKLTEGQYDAIILAKAGLKRLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +K+ ++ P+ QG + IE ++ Q+++ +NHE+T ERAFL L
Sbjct: 176 LLEHVKQTIDDTLMIPAVCQGTLGIEYREDDQDVQKVIGFLNHEETVFRTKAERAFLKRL 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ + A G L G + DG + G++ DA+ +G A+ I
Sbjct: 236 EGGCQVPLGCIANLVGDRLILKGFLANLDGSKYIYEEIEGDKTDAVKLGLKLAKNILGQG 295
Query: 301 NKNVF 305
K +
Sbjct: 296 GKEII 300
>gi|238018694|ref|ZP_04599120.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748]
gi|237865165|gb|EEP66455.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748]
Length = 319
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 108/301 (35%), Positives = 170/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT
Sbjct: 12 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L +
Sbjct: 70 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPEGA 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I
Sbjct: 130 CVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+
Sbjct: 190 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 249
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ L ++ + DGK +E +G A +G++ A+ + K++
Sbjct: 250 VPMGVHGTINKGQLILKAMIASLDGKTVYEGEISGPAKKAEILGKNLAKALYEEGGKHIV 309
Query: 306 N 306
+
Sbjct: 310 D 310
>gi|153008310|ref|YP_001369525.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188]
gi|166217778|sp|A6WXJ2|HEM3_OCHA4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151560198|gb|ABS13696.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188]
Length = 314
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 150/302 (49%), Positives = 196/302 (64%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ETR LM+ H +P I IIP+ST GDRI +R L+EIGGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIIPMSTAGDRIQDRALSEIGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL
Sbjct: 70 TEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++ + E FPP+PGQGAI IET + + + L+ + H +T ++ CERAFLA LDGSC
Sbjct: 190 ITDLADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G T+ F+G++L DG HE+ G +A IG +AA+++R +
Sbjct: 250 RTPIAGLATVNGDTVSFHGMILKPDGSEAHEIKTEGPASNAAAIGTEAAEHLRAKAGPQF 309
Query: 305 FN 306
F
Sbjct: 310 FE 311
>gi|148545465|ref|YP_001265567.1| porphobilinogen deaminase [Pseudomonas putida F1]
gi|167008818|sp|A5VWX3|HEM3_PSEP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148509523|gb|ABQ76383.1| hydroxymethylbilane synthase [Pseudomonas putida F1]
Length = 313
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLET 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|134300009|ref|YP_001113505.1| porphobilinogen deaminase [Desulfotomaculum reducens MI-1]
gi|189028090|sp|A4J6H7|HEM3_DESRM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134052709|gb|ABO50680.1| hydroxymethylbilane synthase [Desulfotomaculum reducens MI-1]
Length = 309
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 156/304 (51%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +G+R S LAL L + P I + TKGD++ + L +IG KG
Sbjct: 2 KHKITVGSRDSALALWQTRWVVEQLEK--QNPDVTFEITTMKTKGDKMLDVALAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ EID AVHS KDMPT L +GL I A R++ D IS + L +L
Sbjct: 60 LFTKELEVAMLQKEIDFAVHSLKDMPTALPEGLIIGAVCKRDNPGDALISKDGRKLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR A LL +R D + RG + TR+ KL + + I+LA AGI R+ E
Sbjct: 120 KGARIGTSSLRRCAQLLNYRPDFQLEALRGNLNTRMKKLVSEQLDGIILAAAGITRMGWE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I EI+ + P+ GQGAI +E ++P+ L+K I H +T + ER+ L L+G
Sbjct: 180 DMIAEIIPFQVCLPAVGQGAISVECREDDPEILNLLKGIEHTETKAATEAERSLLRYLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + K + L +V DG A+ +G + A+ + + K
Sbjct: 240 GCQVPIGAHSEVKNNRLMLTAVVATLDGTKVIRAQGENEVNKAVELGIEVAEKLMAMGGK 299
Query: 303 NVFN 306
+
Sbjct: 300 KILE 303
>gi|317129820|ref|YP_004096102.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522]
gi|315474768|gb|ADU31371.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522]
Length = 310
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LA+ L + + I + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSNLAMTQTKWVIEQLKSLGL--NYEFEIKEIVTKGDKILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIEK + GEID AVHS KD+P ++ G+ + A R D RD FIS++ + L DL
Sbjct: 60 FVKEIEKAMYDGEIDIAVHSMKDLPAEIADGMAVGAIPKRVDPRDAFISNSGKGLMDLPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
S++GTSSLRR A +L R D+ + RG I+TRL K AI+LA AGI+R+
Sbjct: 120 GSIVGTSSLRRSAQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGIERVGWTS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ E L E P+ GQGA+ IE ++ + L+ IN DT +V ERAFL ++G
Sbjct: 180 DIVTEFLEPEVCLPAVGQGALGIECRADDKEVLALLAKINDSDTEKTVTAERAFLHTVEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ +AG+A + + +V + DG+ S G D + IG++ AQ +
Sbjct: 240 GCQVPVAGYATLQDNGEIALTALVGSPDGQQIFRESIAGT--DPVAIGKEVAQRMLKAGA 297
Query: 302 KNVFN 306
K V +
Sbjct: 298 KKVLD 302
>gi|119475318|ref|ZP_01615671.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143]
gi|119451521|gb|EAW32754.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143]
Length = 313
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 110/308 (35%), Positives = 170/308 (55%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A ++ L H P ++ ++ ++T+GD++ + L +IGG
Sbjct: 1 MPSNLVRIATRESPLALWQAEFIKAGLQAAH--PGLDVELLGMTTRGDKMLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL++S RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPEGLELSIICEREDPRDAFVSNHFKTVNE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L S +GTSSLRR+ L R D+++ID RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPLGSRVGTSSLRRQCQLRALRPDLNIIDLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I + + ++ P+ GQGA+ +E ++ + Q L+ +NH T V+ ERA L
Sbjct: 179 MEQRIADPIAVDSSLPAGGQGAVGVEARSDDHRIQALLAPLNHRSTALRVSAERAMNLRL 238
Query: 241 DGSCKSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
G C+ IA FA L G+V + DGK R A +G + A +
Sbjct: 239 QGGCQVPIACFAELDIEGSGQLRLRGLVGSPDGKEILRCERQAKPEMAEALGIEVADNLL 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 AQGAERIL 306
>gi|77920653|ref|YP_358468.1| porphobilinogen deaminase [Pelobacter carbinolicus DSM 2380]
gi|123756552|sp|Q3A009|HEM3_PELCD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77546736|gb|ABA90298.1| hydroxymethylbilane synthase [Pelobacter carbinolicus DSM 2380]
Length = 315
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL A + L +H P ++V++P++TKGD+I + L ++GG
Sbjct: 1 MSSSALRIGTRASRLALWQAEWVQQQLETLH--PGLSVVLVPITTKGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L G ID AVHS KD+P+ L GL + PRED RD ++ +S
Sbjct: 59 KGLFVKEIEEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL R D+ ++ RG +ETRL K+ I+LA AG+KRL+
Sbjct: 119 LPQGARIGTSALRRQAQLLHRRPDLDIVSLRGNVETRLRKMEEEDMDGIVLAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L+++ P+ GQGA+ +E + + EL+ ++ DT +V ERAFL L
Sbjct: 179 LAERIAEYLSVDVSLPAIGQGALGLECREGDDRTLELIAPLHDADTAVAVRAERAFLRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ +A A TL G+V DG + + A +G A+ +
Sbjct: 239 NGGCQVPLAAHATVAEQTLTMVGLVAEVDGGSLIKETLAAPVAQAEAVGCQLAETLLARG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADRIL 303
>gi|254713697|ref|ZP_05175508.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
gi|254715953|ref|ZP_05177764.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261217716|ref|ZP_05931997.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261321437|ref|ZP_05960634.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
gi|260922805|gb|EEX89373.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261294127|gb|EEX97623.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
Length = 314
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 143/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 250 RTPIAGLATVEGDRLSFQGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309
Query: 305 FN 306
F+
Sbjct: 310 FD 311
>gi|253699058|ref|YP_003020247.1| porphobilinogen deaminase [Geobacter sp. M21]
gi|259647798|sp|C6DYY8|HEM3_GEOSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|251773908|gb|ACT16489.1| porphobilinogen deaminase [Geobacter sp. M21]
Length = 318
Score = 377 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEK--RYPDMTVTLTKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNNVK-FAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE +++N ++ + NH DT +V ERA L
Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNHPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F G L G + + DGK+ + G D +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVTGDELKLTGFIASVDGKVSVKGVVTGPADDCEKLGVKLAEQLLSEG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHAIL 302
>gi|294851125|ref|ZP_06791798.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026]
gi|294819714|gb|EFG36713.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026]
Length = 314
Score = 377 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 143/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGSHF 309
Query: 305 FN 306
F+
Sbjct: 310 FD 311
>gi|332975659|gb|EGK12548.1| porphobilinogen deaminase [Psychrobacter sp. 1501(2011)]
Length = 339
Score = 377 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 103/321 (32%), Positives = 169/321 (52%), Gaps = 21/321 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLA+ A +S L ++ P + ++ + T+GD+I + L +IGGKGL
Sbjct: 11 KTLNIATRKSPLAMWQAEHIKSRLESLY--PELEVNLVTMVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P +L +GL + Y RE D F+S+ L+DL
Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMQLPEGLILGTYCKRETPTDAFVSNNYDKLEDLPE 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR+ + +R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ +
Sbjct: 129 GAVVGTASLRRQCQIKAFRPDLQIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK+ ++I+ P+ GQGA+ IE ++ EL+K +N + ERA L+G
Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDEAVLELLKPLNDGQARIRLKAERALNRRLEGG 248
Query: 244 CKSAIAGFAYCKGS-----------TLYFYGIVLASDGKIFHEVSRN--------GNRCD 284
C+ IA +A + TL+ G V + DG + +
Sbjct: 249 CQVPIAAYAVIEKDSEPSDQQIFQKTLWLRGRVGSEDGTTLLKAEKRIELSGDQAAREAQ 308
Query: 285 AINIGRDAAQYIRFISNKNVF 305
A +G + A + + ++
Sbjct: 309 AEQLGIEVADELLSLGADSIL 329
>gi|313496556|gb|ADR57922.1| HemC [Pseudomonas putida BIRD-1]
Length = 313
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVMAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|288553611|ref|YP_003425546.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4]
gi|288544771|gb|ADC48654.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4]
Length = 310
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IG+R S LAL + L K P+N + + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIVIGSRRSNLALTQTDWVINQLKK--KEVPYNFEVKKIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L + EID AVHS KD+P+ + +G ++A RED RD FIS LKDL
Sbjct: 60 FVKEIEQALENKEIDIAVHSMKDVPSVMPEGFSLAAITEREDARDAFISLDHVKLKDLPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A LL R D+ V RG +ETRL KL AI+LA AG+ RL E
Sbjct: 120 GAIVGTSSLRRSAQLLAERPDLEVKWIRGNVETRLRKLKEEDFSAIILAAAGLNRLGYSE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+++ E L E P+ GQGA+ +E ++ + EL++ +N E T +V ER FL +++G
Sbjct: 180 ELVTEYLEPEMCVPAVGQGALGLECRSDDQEVIELIQKLNDEATALTVTAERTFLHKMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DGK + + G D + +G + ++ +
Sbjct: 240 GCQVPIAGYATMQEDGQVSLTALVGSPDGKTILKDTVVG--QDPVKVGEEVSERLLEKGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KEILD 302
>gi|26986930|ref|NP_742355.1| porphobilinogen deaminase [Pseudomonas putida KT2440]
gi|38258017|sp|Q88RE5|HEM3_PSEPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|24981540|gb|AAN65819.1|AE016210_7 porphobilinogen deaminase [Pseudomonas putida KT2440]
Length = 313
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|30248604|ref|NP_840674.1| porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718]
gi|39931498|sp|Q82WS2|HEM3_NITEU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30180199|emb|CAD84501.1| Porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718]
Length = 308
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K I +R S LAL A R L++++ P +I I+ ++TKGD+I + +L++IGGK
Sbjct: 3 SPKKIVIASRESQLALWQANFIRGRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L G D AVHS KD+P + G ++A RED RD F+S+ SL++L
Sbjct: 61 GLFIKELELALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLEEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PAGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I +L E P+ GQGA+ IE N+P E +K ++H T V ERA L
Sbjct: 181 GYRISMLLPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRMLG 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ + GFA L G V DG G +G+ AQ ++
Sbjct: 241 GSCQVPLGGFAEIFEDVLTLRGFVATPDGSRMIADKLCGKPESGEQVGQQLAQNLKAHGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 EEIL 304
>gi|22299189|ref|NP_682436.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1]
gi|39931549|sp|Q8DIE4|HEM3_THEEB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|22295371|dbj|BAC09198.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1]
Length = 320
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 158/308 (51%), Gaps = 5/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+P RIG+R S LAL ++ L H+ ++ ++T+GD I + L +IG K
Sbjct: 5 SSRPVRIGSRKSQLALVQTEWVQAQLQTHHR--DRAFEVVTMTTQGDNILDVALAKIGDK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E ++ GE D AVHS KD+PT+L GL ++A RED D + T ++
Sbjct: 63 GLFTKELELSMLRGETDLAVHSLKDLPTQLPDGLVLAAITEREDPADALVLGAKWTGHTI 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++R
Sbjct: 123 DTLPEGTVIGTSSLRRLAQLRHYYPHLTFKDVRGNLNTRLAKLDAGEYDALILAVAGLRR 182
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I ++L + GQGA+ IE + LVK + H +T ERAFL
Sbjct: 183 LGFGDRISQVLPATVSLYAVGQGALGIECRAEDADILALVKTLEHPETTARCLAERAFLR 242
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ I + L G+V + DG+ + S G+ A +G A +R
Sbjct: 243 QLEGGCQVPIGVHTVIENGQLTLTGLVASLDGQRLVKDSLTGDVATAEELGTRLALKLRE 302
Query: 299 ISNKNVFN 306
+
Sbjct: 303 QGASEILE 310
>gi|322421444|ref|YP_004200667.1| porphobilinogen deaminase [Geobacter sp. M18]
gi|320127831|gb|ADW15391.1| porphobilinogen deaminase [Geobacter sp. M18]
Length = 318
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEK--RYPDMTVTLKKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISR-GVKFAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLETEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE ++N + ++ + NH DT +V ERA L
Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECSLSNEEVKDAISFFNHPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA + G L G + + DGK+ + G + +G A+ +
Sbjct: 238 EGGCQVPIAAYGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADECEKLGVKLAEQLLSDG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHAIL 302
>gi|92115224|ref|YP_575152.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043]
gi|91798314|gb|ABE60453.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043]
Length = 311
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 160/304 (52%), Gaps = 4/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L+ +H P + ++ ++T+GD+I + L ++GGKGL
Sbjct: 2 QTLRIATRQSRLALWQAEHVKARLLALH--PGLEVELVAMTTRGDKILDSPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L+ G D AVHS KD+P +GL +S L D F+S+ SL L
Sbjct: 60 FVKELEEALLDGRADIAVHSMKDVPMHFPEGLGLSVILESGAPTDAFVSNDYASLDALPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+GTSSLRR + R D+ V++ RG ++TRL KL+ + AI+LA +G++RL+
Sbjct: 120 GVRVGTSSLRRGLQVKEARPDLEVLNLRGNVQTRLGKLDGGEFEAIILATSGLQRLELGH 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + L E P+ GQGA+ IE ++ EL+ ++H T V ERA LDG
Sbjct: 180 RITQELPPEVSLPACGQGALGIECRHDDESLLELLAPLDHPQTATRVRAERAMNTRLDGG 239
Query: 244 CKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I G+A + TL+ +V DG G+ + +G A+ +
Sbjct: 240 CQVPIGGYAVLEDGDRTLWLRALVGDPDGSRVLRAEGRGSADEPEALGVRIAESLLDQGA 299
Query: 302 KNVF 305
++
Sbjct: 300 GDIL 303
>gi|212633296|ref|YP_002309821.1| porphobilinogen deaminase [Shewanella piezotolerans WP3]
gi|212554780|gb|ACJ27234.1| Porphobilinogen deaminase [Shewanella piezotolerans WP3]
Length = 294
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 104/290 (35%), Positives = 161/290 (55%), Gaps = 2/290 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L +H+ + ++P+STKGD I + L ++GGKGLF +E+E ++
Sbjct: 1 MWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P +GL + RED RD F+S+ S+ +L +V+GTSSLRR+
Sbjct: 59 ADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNFSSINELPQGAVVGTSSLRRQC 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+ R D+ + D RG + TRL KL+ AI+LA AG+KRLK E+ I ++ ED P
Sbjct: 119 QIRAARPDLQIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERITSFISAEDSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE ++ + + L+ + H +T V ERA L+G C+ I +A G
Sbjct: 179 ANGQGAVGIECRTDDARVKALLAPLEHLETRQRVIAERAMNTRLEGGCQVPIGAYAEIDG 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
TL G+V DG E + +GN+ DA +G A+ + K + +
Sbjct: 239 DTLSLRGLVGNPDGSQVIEAATSGNKNDAEQLGVALAEELLSKGAKTILD 288
>gi|269798482|ref|YP_003312382.1| porphobilinogen deaminase [Veillonella parvula DSM 2008]
gi|282849932|ref|ZP_06259315.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745]
gi|269095111|gb|ACZ25102.1| porphobilinogen deaminase [Veillonella parvula DSM 2008]
gi|282580369|gb|EFB85769.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745]
Length = 312
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 169/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT
Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E+ + +G+ID AVHS KDMPT+L +GL + A RE D +S ++L L +
Sbjct: 63 AELEEAMHAGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL E I
Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLEDQI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + +++ IN E T +V ER+FL +L+G C+
Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLDMLDPINDEATRYAVEGERSFLRQLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ L ++ + DGK +E +G +G++ A+ + K +
Sbjct: 243 VPMGVHGTINKGQLTLKAMIASLDGKTVYEGEISGPAKKGEILGKNLAKALYEEGGKRIV 302
Query: 306 N 306
+
Sbjct: 303 D 303
>gi|123965794|ref|YP_001010875.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515]
gi|158512730|sp|A2BVF7|HEM3_PROM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123200160|gb|ABM71768.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515]
Length = 316
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTKLKLKIASRRSKLAMVQTLWVKEQLEK--NIPNLEVSIESMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLIGKADIAVHSLKDLPTNLPDGLKLGCITKREDPSDALVVNKKNEIYQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L ++ D RG + TR+ KL++ + I+LA AG+K
Sbjct: 119 LESLPAGSIVGTSSLRRLAQLRYKFPYLNFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE + + +++ V+ + + ER+FL
Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSEDKEVLKIISVLEDKASSQKCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + + G+V + DGK + +GN +G+ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSSIQNDEICLKGMVASIDGKKLIKDESSGNVKYPEEVGKKLAEKLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 LQGADKIL 306
>gi|166367009|ref|YP_001659282.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843]
gi|166089382|dbj|BAG04090.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843]
Length = 319
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL
Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120
FT+E+E ++ ID AVHS KD+PT L +GL + R + D + + L
Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDT 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL
Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I + L G+V + DGK + S +G+ +GRD A +R
Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVREAG 305
Query: 301 NKNVF 305
+
Sbjct: 306 AGEIL 310
>gi|224370660|ref|YP_002604824.1| HemC [Desulfobacterium autotrophicum HRM2]
gi|223693377|gb|ACN16660.1| HemC [Desulfobacterium autotrophicum HRM2]
Length = 325
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 161/304 (52%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK +IGTR S LAL A + + D + P + I+ + T GD I +R L+ +GGKG
Sbjct: 20 KKTIKIGTRGSKLALWQANHVKDRIED--QFPETEVEIMTIKTTGDMIVDRPLSMVGGKG 77
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIEK L+ ID AVHS KDMP +L GL I A RE+ DV IS+ SL DL
Sbjct: 78 LFVKEIEKALLESTIDMAVHSMKDMPGELPPGLVIGAVPARENPFDVLISNNNLSLADLP 137
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR + + R DI RG ++TRL KL + A LLA AG+ RL +
Sbjct: 138 KGARIGTSSLRRASQIKHARPDIETASIRGNLDTRLKKLAAGEFDATLLAAAGLIRLGMK 197
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI + + P+ GQGA+CIE+ + ++ +NH +T V+ ERAFL LDG
Sbjct: 198 TVITQYFDETIMIPAVGQGALCIESRQEDLDIAPVLAFLNHGETHTVVSGERAFLRRLDG 257
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC +A F + + G+V + DG+ + + G D G A+ +
Sbjct: 258 SCHIPVACFGRLEDHRVILTGLVASEDGRTILKETVAGTPEDPQKAGIALAETLLSKGAD 317
Query: 303 NVFN 306
+
Sbjct: 318 KILE 321
>gi|194477303|ref|YP_002049482.1| porphobilinogen deaminase [Paulinella chromatophora]
gi|171192310|gb|ACB43272.1| porphobilinogen deaminase [Paulinella chromatophora]
Length = 313
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 104/308 (33%), Positives = 153/308 (49%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MVSSFLRIASRRSQLAMVQTHWVRDQLAQAH--PSLEITIETMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117
KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPDGLVLGCVTEREDPADALVINKKYQDRL 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L S++GTSSLRR A L + D RG + TRL KL++ + ++LA AG++
Sbjct: 119 LDTLPNGSIVGTSSLRRLAQLRHHFPHLVFKDIRGNVITRLEKLDSGEFDCLILAAAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I EI++ + GQGA+ IE + + +KV+ H T ERAFL
Sbjct: 179 RLGLGSRIHEIIDSSISLHAVGQGALGIECRDGDLDILKQIKVLEHAPTNYRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I KG+ L G+V + DGK G+ + +IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRIKGNQLILTGMVASLDGKRLIRDEVYGDLINPEDIGIKLANILK 298
Query: 298 FISNKNVF 305
+++
Sbjct: 299 EQGAEDIL 306
>gi|289207199|ref|YP_003459265.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix]
gi|288942830|gb|ADC70529.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix]
Length = 315
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 115/292 (39%), Positives = 161/292 (55%), Gaps = 2/292 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP RI TR SPLA+ A + L +H P + ++ ++T+GDR+ + L IGGKGL
Sbjct: 2 KPLRIATRKSPLAMWQAEHVAARLRGLH--PDLPVELVGMTTQGDRVLDSPLARIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ D AVHS KD+P +L L + L RED D F+S+T + +L
Sbjct: 60 FVKELEVAMLEDRADIAVHSVKDVPMELPADLVLPVILDREDPLDAFVSNTYAHVDELPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +G+SSLRR+ L R D+ + D RG + TRL KL+ + AILLA AG+KRL ++
Sbjct: 120 GARVGSSSLRRQCQLRARRPDLKITDLRGNVNTRLGKLDAGEYDAILLAAAGLKRLGFDE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L P+ GQGAI IE N+P+ L+ +N DT D V ERAF L+G
Sbjct: 180 RIRARLEPAVSLPAVGQGAIAIECRENDPEIAALIAPLNDRDTSDRVRAERAFNRRLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
C+ +AG A G L G+V A DG G R DA +G A+
Sbjct: 240 CQVPLAGHATLDGDRLRLDGLVGAVDGSQLLRRQVEGPRGDAEALGVQLAEQ 291
>gi|33861052|ref|NP_892613.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|39931394|sp|Q7V2I1|HEM3_PROMP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33639784|emb|CAE18954.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 316
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTKFKLKIASRRSKLAMVQTLWVKEQLEK--NIPDLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117
KGLFT+E+E +++ G D AVHS KD+PT L GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPDGLTLGCITKREDPSDALVVNKKNKIYQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TR+ KL++ + I+LA AG+K
Sbjct: 119 LESLPPGSIVGTSSLRRLAQLRYKFPHLDFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E + +I+ E + GQGA+ IE ++ + +++ V+ + + ER+FL
Sbjct: 179 RLGFESRVHQIIPNEISLHAVGQGALGIECKSDDKEVLKIISVLEDKVSSQRCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + + G+V + DGK + GN +G+ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSSIQNDEIALIGMVASIDGKRLIKNESIGNIKYPEEVGKKLAEKLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 LQGADKIL 306
>gi|159026408|emb|CAO88937.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 319
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL
Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120
FT+E+E ++ ID AVHS KD+PT L +GL + R + D + + L
Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSENQDYQLDT 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL
Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I + L G+V + DGK + S +G+ +GRD A +R
Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVRDAG 305
Query: 301 NKNVF 305
+
Sbjct: 306 AGEIL 310
>gi|113952874|ref|YP_731239.1| porphobilinogen deaminase [Synechococcus sp. CC9311]
gi|122945597|sp|Q0I8I3|HEM3_SYNS3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|113880225|gb|ABI45183.1| porphobilinogen deaminase [Synechococcus sp. CC9311]
Length = 316
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEYT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRYHYPHLQFKDVRGNVITRLEKLDSGNYDCLILAAAGLS 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + GQGA+ IE + P+ EL++V+NH T ERAFL
Sbjct: 179 RLGFGDRIHQSIPGNISLHAVGQGALGIECVCDRPEVMELIQVLNHAPTSARCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I +G T+ G+V + DGK + G D +GRD A ++
Sbjct: 239 RVLEGGCQVPIGVNTQIEGDTIQLTGMVASLDGKRLIRDEQAGPLADPEAVGRDLAHKLK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 DQGAGEILQ 307
>gi|254700531|ref|ZP_05162359.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
gi|261751035|ref|ZP_05994744.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
gi|261740788|gb|EEY28714.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
Length = 314
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 142/302 (47%), Positives = 196/302 (64%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IG R S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 10 TLKIGARGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ +
Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309
Query: 305 FN 306
F+
Sbjct: 310 FD 311
>gi|116075276|ref|ZP_01472536.1| porphobilinogen deaminase [Synechococcus sp. RS9916]
gi|116067473|gb|EAU73227.1| porphobilinogen deaminase [Synechococcus sp. RS9916]
Length = 316
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 107/308 (34%), Positives = 156/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEQLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALAVNAKNAQYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LDTLPAGSVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ E + GQGA+ IE +P+ EL+KV+ H T ER+FL
Sbjct: 179 RLGFGDRIHQIIPSEISLHAVGQGALGIECVEGSPEVLELIKVLEHAPTAARCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I G TL G+V + DGK +G DA IG+ A ++
Sbjct: 239 RELEGGCQVPIGVNTVIDGDTLTLTGMVASLDGKRLIRDQASGTTADAEAIGKQLADTLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 GQGAGEIL 306
>gi|320354663|ref|YP_004196002.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032]
gi|320123165|gb|ADW18711.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032]
Length = 319
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 112/301 (37%), Positives = 172/301 (57%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ + ++ + H P + ++ ++TKGDRI + L ++GGKGLF
Sbjct: 5 LRIGTRASLLAVTQSTWVKTQIEQAH--PGTRVELVKITTKGDRILDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++GE+D AVHS KD+PT+L +GL I RE D F+S T +L DL +
Sbjct: 63 KEIEDALLAGEVDLAVHSMKDVPTELPEGLHIGVIPVRETPYDAFLSKTCTTLADLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRRK+ L+ R D+ ++D RG I+TRL KL+ AI+LA AG++RL E I
Sbjct: 123 TIGTSSLRRKSQLMALRPDLDIVDLRGNIDTRLRKLDEGVYDAIILAGAGLRRLHLEHRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L P+ QGA+ IE ++ + + ++ ++H +T +V ERAFL L+G C+
Sbjct: 183 TALLEPTQMLPAISQGALGIELRQDDTELADGLRFLHHGETAVAVEAERAFLLRLEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA A ++ G++ + DG+ + + G A +G AQ + K +
Sbjct: 243 VPIAAHATLDSGSVTLTGLIASVDGRQILKEATTGPAEQAARLGAQLAQTLLDRGGKAIL 302
Query: 306 N 306
+
Sbjct: 303 D 303
>gi|33239945|ref|NP_874887.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|39931408|sp|Q7VD89|HEM3_PROMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33237471|gb|AAP99539.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 315
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 102/310 (32%), Positives = 158/310 (50%), Gaps = 5/310 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ + L P +I I ++T+GD+I + L +IG
Sbjct: 1 MALDQVRIASRRSQLAMVQTNWVKEELEKA--CPSIDISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITKREDPADALVVNKKYKNYQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L DL SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LNDLPEGSVVGTSSLRRLAQLRHHYPGLIFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE + + +++KV+ H+++ ERAFL
Sbjct: 179 RLGFGNRIHQLIPSEISLHAVGQGALGIECVKDKEEILQIIKVLEHKESSLRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + +G L G+V + DGK ++ G+ IG + A ++
Sbjct: 239 KELEGGCQVPIGVNSKIQGQELILTGMVASLDGKQLIRDTKTGSSMHPETIGIELANTLK 298
Query: 298 FISNKNVFNF 307
+
Sbjct: 299 SQGAMEILEV 308
>gi|121997816|ref|YP_001002603.1| porphobilinogen deaminase [Halorhodospira halophila SL1]
gi|229836112|sp|A1WVT9|HEM3_HALHL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|121589221|gb|ABM61801.1| hydroxymethylbilane synthase [Halorhodospira halophila SL1]
Length = 310
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A + L +H P + ++P+ST+GD I ++ L IGG
Sbjct: 1 MAAESLRIATRRSQLAMWQAEHIAAELQRLH--PGLEVELVPMSTRGDEILDQPLARIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE D AVHS KD+P +L +G ++A R D RD F+S+ L +
Sbjct: 59 KGLFMKELEDGMLRGEADLAVHSMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR+ ++ R D+ + RG ++TRL KL++ AI+LA +G+ RL+
Sbjct: 119 LPHGARVGTASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLDDGVYDAIILAASGLDRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I L E P+ GQGA+ IE + + +LV+ +NHE T +N ER A L
Sbjct: 179 LTHRIAGRLTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+GSC+ I G+A G ++ G+V A DG G +A N+GR +
Sbjct: 239 EGSCQVPIGGYAELDGDEVHLRGLVGAIDGSEVIRGEIRGPAAEAENLGRQLGDDLLARG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADRIL 303
>gi|197116806|ref|YP_002137233.1| porphobilinogen deaminase [Geobacter bemidjiensis Bem]
gi|226706286|sp|B5EBG8|HEM3_GEOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|197086166|gb|ACH37437.1| hydroxymethylbilane synthase [Geobacter bemidjiensis Bem]
Length = 318
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEK--RYPDMTVTLTKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISN-GVKFAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE +++N ++ + N DT +V ERA L
Sbjct: 178 FADQITEMLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNSPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F G L G + + DGK+ + G D +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADDCEKLGVKLAEQLLSEG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHAIL 302
>gi|254483263|ref|ZP_05096495.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148]
gi|214036486|gb|EEB77161.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148]
Length = 310
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A R +LM H P + ++ ++++GD++ + L ++GG
Sbjct: 1 MPTRTLTIATRESPLALWQAEYVRDALMSAH--PRLEVNLLGMTSRGDQLLDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED D F+S+ +SL
Sbjct: 59 KGLFVKELETALLDGSADIAVHSMKDVPMSFPEGLTLGVICEREDPTDAFVSNNFESLAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ V RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRECQLRARRPDLQVKFLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + ++++D P+ GQGA+ IE + EL++ ++H T V ERA L
Sbjct: 179 FGERIADSISVDDSLPAGGQGAVGIELREGDGDVLELLQTVHHPLTAQRVIAERAMNQRL 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA FA L G+V DG + DA N+G A +
Sbjct: 239 NGGCQVPIACFAEYLDNGHLRLRGLVGRPDGSEVLRAEAISSPEDAENLGISVANELLVQ 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAAAIL 304
>gi|323701815|ref|ZP_08113485.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574]
gi|323533119|gb|EGB22988.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574]
Length = 309
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ ++G+R S LAL + L + P + I+ + TKGD++ + L +IG KG
Sbjct: 2 KRKIKVGSRDSALALWQTRWVVAQLEQ--QNPHLSFEIVTMKTKGDKMLDVALAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E +++ EID AVHS KDMPT L GL I A R++ D IS + L +L
Sbjct: 60 LFTKELELAMLNKEIDFAVHSLKDMPTALPAGLTIGAVCKRDNPGDALISKDGRKLAELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR A LL +R D + RG + TR+ K+ + + AI+LA AGI R+
Sbjct: 120 QGARIGTSSLRRCAQLLNYRPDFRLEALRGNLNTRMKKMASQQLDAIILAAAGIYRMGWS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I EI+ P+ GQGAI +E ++ + +L++ + H+ T + + ER+ L L+G
Sbjct: 180 DMIAEIIPFNVCLPAVGQGAIAVECREDDIEINQLLQGVEHQPTRVATDAERSLLRRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + L IV DG+ G A +G + A + + K
Sbjct: 240 GCQVPIGAYGEVIEDRLSLQAIVATLDGQRLIRAQGEGALNQAEELGIEVADKLLSMGGK 299
Query: 303 NVFN 306
+
Sbjct: 300 EILQ 303
>gi|148559606|ref|YP_001259712.1| porphobilinogen deaminase [Brucella ovis ATCC 25840]
gi|166201494|sp|A5VSL5|HEM3_BRUO2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148370863|gb|ABQ60842.1| porphobilinogen deaminase [Brucella ovis ATCC 25840]
Length = 304
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 1 MKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 61 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 121 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 181 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 241 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 300
Query: 306 N 306
+
Sbjct: 301 D 301
>gi|323141796|ref|ZP_08076663.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067]
gi|322413719|gb|EFY04571.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067]
Length = 306
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 113/303 (37%), Positives = 173/303 (57%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LAL + + L + P +V+ + TKGDRI + L +IGGKG
Sbjct: 2 KAKLTIGTRQSLLALWQSNHIAALLRK--EYPECEVVLKKIVTKGDRILDVPLAQIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE+ L+ G +D AVHS KDMPT L +GL ++A R ++ D F+S+ + ++L
Sbjct: 60 LFTKEIEEDLLDGTVDLAVHSLKDMPTVLPEGLCLTAITERANVGDAFVSNKYATFEELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L SV+GTSSLRRKA LL R D+ + D RG ++TRL KL+ AI+LA AG++RL
Sbjct: 120 LGSVVGTSSLRRKAQLLAKRPDLEIRDLRGNVDTRLRKLDEGLYDAIILAAAGLERLGHG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++ + P+ GQGA+ IE + + ++++ +N +T + + ERAFL L+G
Sbjct: 180 DRISSLIPADVCLPAVGQGALAIEARTADKEVRDMLSFLNDLNTKQATDAERAFLGLLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A +G + I+ A DG + NG DA+++G+ + + +
Sbjct: 240 GCQVPIGVHADVEGENIRIEAIIAALDGSTILRDTINGKADDAVSLGQQLGKKMLAAGGQ 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|332701796|ref|ZP_08421884.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay]
gi|332551945|gb|EGJ48989.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay]
Length = 316
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ I TR S LAL A +S L++ H + ++ L T+GD+I + L ++GGKG
Sbjct: 2 RTKLTIATRGSMLALWQAEHVKSMLVERHS--GLEVELLMLKTQGDKILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+PT+L +GL I RE+ D +S +L L
Sbjct: 60 LFVKEIEEALLDGRADLAVHSMKDVPTELPEGLIIGVTPKREEPADALLSVRYDNLAALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSS RR+A LL R D + RG + TRL KL + + AI+LA AG+ RL
Sbjct: 120 EGAVIGTSSFRRQAQLLMRRPDFEIKMLRGNVNTRLRKLMDGEYDAIVLAMAGLNRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E+L DF P+ QG + IE ++ + +++ ++H +T V ER FL L+G
Sbjct: 180 APKMEVLGPPDFLPAVSQGVLGIEYRRDDAELADMLAFMDHPETRVRVQAERGFLTALEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A +G + G+V DG+ R+ A +G A+ + +
Sbjct: 240 GCQVPIAGYAEVRGDEVRLTGLVADLDGRRVIRRERSSPAGQAWELGETLAREVLDAGGR 299
Query: 303 NVFN 306
+
Sbjct: 300 EILE 303
>gi|239827917|ref|YP_002950541.1| porphobilinogen deaminase [Geobacillus sp. WCH70]
gi|259647799|sp|C5D5K7|HEM3_GEOSW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|239808210|gb|ACS25275.1| porphobilinogen deaminase [Geobacillus sp. WCH70]
Length = 311
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P + + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWVIERLRQLGA--PFEFEVKEIVTKGDKIIDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE +++GEID AVHS KDMP L GL I PRED DV IS ++ +L
Sbjct: 60 FVKEIEHAMLNGEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHHDVLISKNKETFANLPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A +L R D+ + RG I+TRL KL N AI+LA AG+ R+
Sbjct: 120 GAIVGTSSLRRSAQILAKRPDLKIKWIRGNIDTRLAKLQNEDYDAIILAAAGLVRMGWAR 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ + P+ GQGA+ +E N+ + +E ++ +N T +V ER FL +++G
Sbjct: 180 DVITEYLSTDVCLPAVGQGALAVECRENDEELREWLQKLNDVHTERAVLAERVFLQQMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+AY + +V + DGK ++ + +G+ + +G +AA+ +
Sbjct: 240 GCQVPIAGYAYIDDREDIVLTALVASPDGKEIYKETVSGS--NPEEVGTNAAKMLIERGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KALID 302
>gi|284006594|emb|CBA71855.1| porphobilinogen deaminase [Arsenophonus nasoniae]
Length = 297
Score = 374 bits (961), Expect = e-102, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 2/290 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L H P I +IP+ST+GD + + L +IGGKGLF +E+E L+
Sbjct: 1 MWQAIFVKTQLEKHH--PTLTIELIPMSTQGDILLDTPLAKIGGKGLFVKELENALLENR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L + A R D RD F+S+ SL L S+IGTSSLRR+
Sbjct: 59 ADIAVHSIKDIPATFPNNLGLMAICQRGDPRDAFVSNQYDSLDALPAGSIIGTSSLRRQC 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L + + D RG + TRL+KL+N + I+LA AG+KRL E I+ L E P
Sbjct: 119 QLRHTYPHLVIQDLRGNVGTRLSKLDNGQYDGIILAVAGLKRLNLETRIRMPLPPEHSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGAI IE +++ Q + ++H DT + ER L G C+ I +A +
Sbjct: 179 AVGQGAIGIECRLDDHHTQHFLAPLHHHDTAICIQAERTVNNRLQGGCQVPIGSYAIWQN 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
++ +V DG R+ DA + + A+ + K + N
Sbjct: 239 KQIWLRALVGTPDGSQIIRGERSFKPEDAQQMSIELAEELLNNGAKQILN 288
>gi|254717954|ref|ZP_05179765.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|265982897|ref|ZP_06095632.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|306838958|ref|ZP_07471782.1| porphobilinogen deaminase [Brucella sp. NF 2653]
gi|264661489|gb|EEZ31750.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|306405961|gb|EFM62216.1| porphobilinogen deaminase [Brucella sp. NF 2653]
Length = 314
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 142/302 (47%), Positives = 197/302 (65%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF
Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V
Sbjct: 130 AIVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVGGTFLACAGLRRLGLADV 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC
Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L F G++L DG+ HEV+ DA +G DAA +R ++ +
Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEEAVSDAAALGTDAANRVRAMAGPHF 309
Query: 305 FN 306
F+
Sbjct: 310 FD 311
>gi|218781846|ref|YP_002433164.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01]
gi|218763230|gb|ACL05696.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01]
Length = 310
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 119/301 (39%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLAL A + L + P ++ + TKGD+I + L ++GGKGLF
Sbjct: 7 IKIGTRGSPLALWQAEHVAALLER--RNPNVKTELVVIKTKGDKILDVPLAKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G D AVHS KD+P++ GL ++A + RED RD I A+ L DL ++
Sbjct: 65 KEIEESLLDGRTDMAVHSMKDVPSEFPPGLCLAAIMEREDPRDALICSRAKGLLDLPPNA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR A LL D+ + RG I TRL+KL + AI+LA AG+KR+ + +
Sbjct: 125 KIGTSSLRRSAQLLALMPDLQIEPLRGNIGTRLDKLTSLNLDAIVLAAAGVKRMAMDDKV 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E + E P+ GQGA+ IE ++P A L + +NHE T V ERAFL LDG C+
Sbjct: 185 SEYIPEETVLPAVGQGAMGIEIREDDPVAGPLARALNHEPTQVIVTGERAFLKRLDGGCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A KG L G++ DG S +G + DA +G A+ + K V
Sbjct: 245 VPVAAHGRLKGDFLQLTGVIAGVDGTPIFRDSVSGKKEDAKELGVKLAEKLLNAGGKAVL 304
Query: 306 N 306
+
Sbjct: 305 D 305
>gi|315645740|ref|ZP_07898864.1| porphobilinogen deaminase [Paenibacillus vortex V453]
gi|315279218|gb|EFU42528.1| porphobilinogen deaminase [Paenibacillus vortex V453]
Length = 318
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 110/314 (35%), Positives = 171/314 (54%), Gaps = 14/314 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +G+R S LAL + L + K ++ + + TKGDRI + TL+++GGK
Sbjct: 2 RTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLDYDFTVKKIVTKGDRILDVTLSKVGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ ++ GEID AVHS KDMP+ L +GL A R+D RD IS +L DL
Sbjct: 62 GLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGATLDDL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+
Sbjct: 122 PQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIVLATAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL+
Sbjct: 182 EDRITSHLPVEISLPAVGQGALGIECRENDSELLHLLSLYNDEVTARTVAAERKFLSELN 241
Query: 242 GSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
G C+ I +A K + + G+V + DG+I + S G D ++G +
Sbjct: 242 GGCQVPIGAYAILKNVDTGDSRGEQNVIQLTGMVGSPDGEIILKESAEGT--DPESLGVE 299
Query: 292 AAQYIRFISNKNVF 305
A ++ + +
Sbjct: 300 VAAKLKAKGAEKIL 313
>gi|296132653|ref|YP_003639900.1| porphobilinogen deaminase [Thermincola sp. JR]
gi|296031231|gb|ADG81999.1| porphobilinogen deaminase [Thermincola potens JR]
Length = 310
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LA+ +L ++ P + I+ + T+GD+I + L +IG KGL
Sbjct: 3 REIVVGTRDSALAMWQTNWVVDNLRKLN--PDYTFKIVSMKTQGDKILDVALAKIGDKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ EID AVHS KD+PT L +GL+I A R D RDV ++ LKD+
Sbjct: 61 FTKELEFAMLRNEIDLAVHSMKDLPTVLPEGLKIGAICERHDPRDVLVARDGILLKDMPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRR A LL++R D+ +I RG + TR+ KL I+LA AGI+RL
Sbjct: 121 GARIGTSSLRRTAQLLKYRPDLQIISLRGNLNTRMAKLERENLDGIILAAAGIERLGWAY 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + E P+ GQG+I IE + + +V +NH + ++ ERA L +L+G
Sbjct: 181 RITQRIPFEVCLPAVGQGSIGIEIREGDEEVSRIVDKLNHGPSAAAITAERAMLKKLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I +G L G+V + DGK G +A ++G A+ + +
Sbjct: 241 CQIPIGALGRVEGDRLTLEGVVASLDGKELLRSRVEGPASEAASLGVALAEKLLDMGALE 300
Query: 304 VF 305
+
Sbjct: 301 IL 302
>gi|297583719|ref|YP_003699499.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10]
gi|297142176|gb|ADH98933.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10]
Length = 312
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 174/306 (56%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LA+ S L + P I ++T+GD I + TL+++GGKG
Sbjct: 2 TRTITLGSRRSNLAMTQTRWVISELEKLGL--PFQFEIKEITTRGDEILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ + +GEID AVHS KD+P+ +GL +++ R D RD IS++ ++L +L
Sbjct: 60 LFVKEIEQAMHNGEIDMAVHSMKDVPSTRSEGLVLASVPKRYDPRDALISNSGKTLMELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR + +L R D+ + RG I+TRL K AI+LA AG++R+
Sbjct: 120 AGSIVGTSSLRRGSQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGLERVGWT 179
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E ++ E L+ + P+ GQGA+ +E ++ + +EL+ INHE T +V ERAFL ++
Sbjct: 180 EDIVTEFLDPDLCLPAVGQGALGLECREDDYELRELLAHINHEQTAITVAAERAFLRTVE 239
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A + ++ +V ++DGK + S G D IG + A+ I
Sbjct: 240 GGCQVPIGAYATLDEQNQIHLTALVASTDGKQVFKESIIG--EDPEYIGTEVAERILRQG 297
Query: 301 NKNVFN 306
K V +
Sbjct: 298 AKGVLD 303
>gi|289548019|ref|YP_003473007.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484]
gi|289181636|gb|ADC88880.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484]
Length = 300
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 122/301 (40%), Positives = 183/301 (60%), Gaps = 6/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L D+ H + ++P++T GD+IT+ L +IGGKGLF
Sbjct: 3 IRIGTRRSQLALWQANYVKRKLEDM----GHTVELVPITTTGDKITDAPLAKIGGKGLFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G+ID AVHS KD+PTKL GL + A RE DV IS Q L++L +
Sbjct: 59 KEIEEALLRGDIDVAVHSLKDVPTKLPDGLTLGAITERELPYDVLISRDGQRLENLPTGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRK + R R D+ + D RG ++TR+ KL+ + AI+LAYAGI+R+ E I
Sbjct: 119 VVGTSSLRRKVQIKRMRRDLVIKDLRGNVDTRIRKLDEGQYDAIVLAYAGIRRMGWENRI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+IL EDF P+ GQG++ +E ++ K +E++ +++H ++ V ERAFL ++G C+
Sbjct: 179 VQIL--EDFIPAVGQGSMAVEIREDDEKIREVISLLDHRESRIRVEAERAFLEVMEGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A+ GS L+ G + +G+ F E GN A +GR+ A+ I +++
Sbjct: 237 VPMGAIAWLDGSRLFMKGFLSDLEGENFVEAYVEGNVEKAQLLGRELAEKILSQGGRSIL 296
Query: 306 N 306
Sbjct: 297 E 297
>gi|222087476|ref|YP_002546013.1| porphobilinogen deaminase [Agrobacterium radiobacter K84]
gi|221724924|gb|ACM28080.1| porphobilinogen deaminase [Agrobacterium radiobacter K84]
Length = 322
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 164/306 (53%), Positives = 214/306 (69%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRI +RTL EIGG
Sbjct: 14 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHGLPEEMFEIVALTTKGDRIADRTLAEIGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+KL SGE+D AVHSAKDM TKL +GL ++AYLPREDIRD I TA L +
Sbjct: 74 KGLFTQELEEKLTSGELDFAVHSAKDMATKLPEGLALTAYLPREDIRDSVIGRTAPKLIE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G++SLRR+AL+ R R DI+VI FRG ++TRL KL +A A LLA AG+KRL
Sbjct: 134 LPHGATVGSASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLAVAGLKRLG 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VI +IL+ ++FPP+P QGAI IE+ + + + +L+ IN T+D V+CER FLA L
Sbjct: 194 KVDVITDILDPDEFPPAPAQGAIGIESRIGDKRMNDLLAAINDSPTFDIVSCERGFLAAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A C+G + F+G++L DG+ H + GNR DA +G +A Q IR +
Sbjct: 254 DGSCRTPIAGYAVCEGDHIRFFGMILTPDGQQVHTTTIEGNRRDAEALGTNAGQAIRAEA 313
Query: 301 NKNVFN 306
F
Sbjct: 314 GSAFFE 319
>gi|114566228|ref|YP_753382.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318683|sp|Q0AZ43|HEM3_SYNWW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114337163|gb|ABI68011.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 306
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 123/302 (40%), Positives = 176/302 (58%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LAL A S L IP + I + T GD+I + L++IG KGL
Sbjct: 2 RNLRLGTRGSQLALWQARHVASLLES--SIPDLKVEIKTIKTTGDKILDVALSKIGDKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EIEK+L+ GEID AVHS KD+P++L GL I+A L RED RDV +SH SL DL
Sbjct: 60 FTKEIEKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++IGTSSLRR A L WR D+ ++D RG +ETR+ K+ I+LA AG+KRL E+
Sbjct: 120 AALIGTSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLEE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+I + L P+ GQG I +E + +L+ INH+D++ + ER FL EL G
Sbjct: 180 MISDYLPAHLVLPAVGQGMIAVEARSDEQDVLKLLSRINHQDSFLAGQAERGFLHELGGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ +A A +G L+ G++ + DGK + S + + +A GR+ A+ +
Sbjct: 240 CQVPVASLAELQGGQLHIRGLIASLDGKEKYSGSSDCSPPEAEEAGRELARSLLQQGGAA 299
Query: 304 VF 305
+
Sbjct: 300 IL 301
>gi|148654060|ref|YP_001281153.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1]
gi|148573144|gb|ABQ95203.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1]
Length = 339
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 107/321 (33%), Positives = 168/321 (52%), Gaps = 21/321 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLA+ A ++ L ++ P + ++ + T+GD+I + L +IGGKGL
Sbjct: 11 KTLNIATRKSPLAMWQAEHIKARLESLY--PDLEVNLVTMVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P L +GL + Y RE D F+S+T SL L
Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMVLPEGLILGTYCKRETPTDAFVSNTYDSLDALPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR+ + R D+ + RG ++TRL+KL+ + AI+LA +G+KR++
Sbjct: 129 GAVVGTASLRRQCQIKAHRPDLIIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSD 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK+ ++I+ P+ GQGA+ IE ++ L+K +N + ERA L+G
Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDDAVLSLLKPLNDGQARIRLMAERALNRRLEGG 248
Query: 244 CKSAIAGFAYCK-----------GSTLYFYGIVLASDGKIFHEVSRN----GNRCD---- 284
C+ IA FA + TL+ G V + DG + + GN+ D
Sbjct: 249 CQVPIAAFAVIEKGAENDDTGSHNKTLWLRGRVGSEDGTTLLKADKRIALMGNQADREAQ 308
Query: 285 AINIGRDAAQYIRFISNKNVF 305
A +G D A + + +
Sbjct: 309 AEQLGIDVADELLSLGADGIL 329
>gi|85060344|ref|YP_456046.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans']
gi|84780864|dbj|BAE75641.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans']
Length = 320
Score = 372 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RI TR SPLAL A R L+ H P + ++PL T+GD + L ++GG
Sbjct: 8 MQDNLLRITTRQSPLALWQAGYVRDELLRHH--PHLQVELVPLVTRGDITLDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+ GL + R+D RD F+S +L
Sbjct: 66 KGLFIKELELALLEHRADIAVHSMKDVTVSFPAGLGLCVLCERDDPRDAFVSPRYANLDV 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ V D RG + TRL KL+ A++LA AG+KRL
Sbjct: 126 LPPGAIVGTSSLRRQCQLRERRPDVIVHDLRGNVGTRLAKLDRGNFDAVILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ D P+ GQGA+ IE +++ + L+ ++H +T V ERA A L
Sbjct: 186 LEDRIRHAIDPADSLPAVGQGAVGIECRLDDARTLALLAPLHHRETSLRVGAERAMNARL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V + DG A +G A +
Sbjct: 246 QGGCQVPIGSYAVLDGEEIWLRALVGSPDGTTVIRSEGRAPLAQAEQLGLRLADDLLNRG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 ARAIL 310
>gi|254515499|ref|ZP_05127559.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3]
gi|219675221|gb|EED31587.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3]
Length = 308
Score = 372 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 166/300 (55%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLAL A+ R +L+ +H P ++ ++ ++++GD+I + L ++GGKGLF
Sbjct: 5 VVIATRESPLALWQAYFVRDTLLKMH--PGISVELLGMTSRGDQILDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G AVHS KD+P + GL+++ RE+ D F+S+ ++L L +
Sbjct: 63 KELETALLDGRAHIAVHSMKDVPMEFPDGLELAVICEREEPADAFVSNNYENLDALPPGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D++V RG + TRL KL+ + AI+LA AG+ RL+ + I
Sbjct: 123 VVGTSSLRRECQLRANRPDLTVRFLRGNVNTRLRKLDEGEYDAIILACAGLIRLEMGERI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + + P+ GQGA+ IE ++ +EL+ ++H T + V ERA L G C+
Sbjct: 183 RARIPVTESLPAGGQGAVGIEIRSDDSATRELLAPLHHGPTAERVLAERALNRRLQGGCE 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA +A +G L+ G+V DG G+R + +G A + +
Sbjct: 243 VPIAAYAVHEGDQLWLRGLVGRPDGSNTLRADARGSRDNPEALGITVADALLEAGAAEIL 302
>gi|242278118|ref|YP_002990247.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638]
gi|259647794|sp|C6BYB7|HEM3_DESAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|242121012|gb|ACS78708.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638]
Length = 308
Score = 372 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 166/303 (54%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I TR S LAL A L + + P + ++ + TKGD+I + L ++GGKGL
Sbjct: 2 RKITIATRGSKLALWQANHISDLLRE--EYPGIEVQLLKIKTKGDKILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G D AVHS KD+PT+L +GL++ PRE D +S SLKDL
Sbjct: 60 FVKEIEEALLDGRADLAVHSMKDVPTELPEGLEVGIIPPREAETDTLLSVKYDSLKDLPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR++ +L R D+ + RG ++TR+ KL N + AI++A AG+ RLK
Sbjct: 120 GAVVGTSSLRRQSQVLALRDDLKIESLRGNLDTRVGKLLNGEFDAIVVATAGLNRLKLSA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
EIL F P+ QGA+ IE + + + Q+++ ++ E T V ER FL LDG
Sbjct: 180 PKSEILGPPTFLPAVAQGALGIEYRIEDTEIQDILAFLHDEMTARQVKAERGFLTGLDGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA ++ + + G V DG + + G DA +IG A+ + K
Sbjct: 240 CQVPIAAWSQLESDQVKLTGFVADIDGSSPIRMEKTGPAEDAWDIGLALAEEVLAAGAKE 299
Query: 304 VFN 306
+ +
Sbjct: 300 ILD 302
>gi|163782608|ref|ZP_02177605.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882181|gb|EDP75688.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 303
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 112/300 (37%), Positives = 165/300 (55%), Gaps = 5/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A +S L + ++ ++T GD+I + L +IGGKGLF
Sbjct: 3 VRIGTRKSKLALWQANFVKSFLEKK---WGVEVELVKITTTGDKILDSPLAKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G ID AVHS KD+P + +GL + A RE+ DV +S L +L +
Sbjct: 60 KEIEQALMEGRIDLAVHSLKDVPMVIPEGLTLGAITEREEPHDVLLSRDGGKLLELREGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R R D+ V RG ++TR+ KL AI+LAYAG+KR+ E +
Sbjct: 120 KVGTSSLRRQVQLKRLRRDLEVEVLRGNVDTRVRKLKEGMYDAIILAYAGVKRMGYEDEV 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + F P+ GQG++ IE + + L++ +NH ++ CERAFL L+G C+
Sbjct: 180 TEVL--DYFIPAVGQGSLAIEIREGDEETLRLIEPLNHPESRVRAECERAFLRRLEGGCQ 237
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I FA KG+TL G + +G F E G +A +G A+ + + +
Sbjct: 238 VPIGAFAQVKGNTLTVRGFISDLEGLKFIEGEEVGKPEEASELGERLAESLLQQGGERIL 297
>gi|162219161|ref|YP_747258.2| porphobilinogen deaminase [Nitrosomonas eutropha C91]
Length = 308
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 164/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IGGK
Sbjct: 3 SPEKIVIASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L G D AVHS KD+P + G +++A RED RD F+S+ SL++L
Sbjct: 61 GLFIKELELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PTGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I ++ E P+ GQGA+ IE N+P E +K ++H T V ERA L
Sbjct: 181 GYRISMLIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLG 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ + GFA L G V DG G +G AQ ++
Sbjct: 241 GSCQVPLGGFAEIFEGVLTLRGFVATPDGSKIIADKLCGKPESGERVGEQLAQNLKTHGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 EEIL 304
>gi|168059289|ref|XP_001781636.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666950|gb|EDQ53592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 134/306 (43%), Positives = 187/306 (61%), Gaps = 4/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGL
Sbjct: 88 VRIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALEIVIIKTTGDKILSQPLADIGGKGL 147
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L
Sbjct: 148 FTKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPE 207
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ LL + V++FRG ++TRL KL+ A LLA AG+KRL +
Sbjct: 208 GSVVGSASLRRQSQLLHKYPHLKVVNFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTE 267
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ IL+ +D P+ QGAI I + K +E + +NHEDT +V CERAFLA+LDGS
Sbjct: 268 HVTTILDTDDMLPAIAQGAIGIACRTGDTKMEEYLSSLNHEDTRLAVACERAFLAKLDGS 327
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFISN 301
C++ IAG A F G+V +DGK E SR G+ D I + +DA Q + +
Sbjct: 328 CRTPIAGLAQRTDDGCSFRGLVATTDGKQVLETSRKGSFFYDDMIALAQDAGQELISRAG 387
Query: 302 KNVFNF 307
+ F +
Sbjct: 388 PDFFEW 393
>gi|317969656|ref|ZP_07971046.1| porphobilinogen deaminase [Synechococcus sp. CB0205]
Length = 317
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 104/309 (33%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H I I ++T+GD+I + L +IG
Sbjct: 1 MAGSQLRIASRRSQLAMVQTHWVRDELAKAHA--GLEITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + K E +KV+ H T ERAFL
Sbjct: 179 RLGLSDRIHELIDPSISLHAVGQGALGIECRDGDAKVLEQIKVLEHVPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK G++ + +G D A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGKRLIRDQVQGDQTNPEALGIDLAHKLK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 AQGAGEILE 307
>gi|261405370|ref|YP_003241611.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10]
gi|329928511|ref|ZP_08282379.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5]
gi|261281833|gb|ACX63804.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10]
gi|328937770|gb|EGG34178.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5]
Length = 318
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 111/314 (35%), Positives = 168/314 (53%), Gaps = 14/314 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGK 61
+ +G+R S LAL + L + K + + TKGDRI + TL+++GGK
Sbjct: 2 RTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLEYDFAVKKIVTKGDRILDVTLSKVGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ +I GEID AVHS KDMP+ L +GL A R+D RD IS +L DL
Sbjct: 62 GLFVKEIEQAMIDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGTTLDDL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+
Sbjct: 122 PQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIILATAGLQRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL+
Sbjct: 182 EDRITSYLPVEVSLPAVGQGALGIECRENDEELLHLLSLYNDEVTARTVAAERKFLSELN 241
Query: 242 GSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
G C+ I +A K + + G+V + DG+I + S G D +G +
Sbjct: 242 GGCQVPIGAYAVMKNVEAGDSRGEQNVIQLTGMVGSPDGEIVLKESAEGT--DPEALGVE 299
Query: 292 AAQYIRFISNKNVF 305
A ++ + +
Sbjct: 300 VAAKLKAKGAEKIL 313
>gi|52081298|ref|YP_080089.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580]
gi|52786677|ref|YP_092506.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580]
gi|319647211|ref|ZP_08001433.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2]
gi|81609014|sp|Q65GK1|HEM3_BACLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52004509|gb|AAU24451.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
licheniformis ATCC 14580]
gi|52349179|gb|AAU41813.1| HemC [Bacillus licheniformis ATCC 14580]
gi|317390558|gb|EFV71363.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2]
Length = 313
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 119/305 (39%), Positives = 171/305 (56%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 2 RNIIVGSRRSKLAMTQTKWVIKKLEELN--PDFTFEIKEIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++SGEID AVHS KDMP+ L +GL + RED RDV IS Q L DL
Sbjct: 60 FVKEIEQAMLSGEIDMAVHSMKDMPSVLPEGLMVGCIPKREDARDVLISKGRQKLADLKQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+V+GTSSLRR A LL+ R D+ + RG I+TRL KL AI+LA AG+ R+ +
Sbjct: 120 GAVVGTSSLRRSAQLLQMRPDLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L+ E P+ GQGA+ IE ++ + L +N T +V ERAFL ++G
Sbjct: 180 DVVTEFLDPESCLPAVGQGALAIECRGSDEELLSLFSRLNDRYTQLTVTAERAFLHAMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAGFA + + G+V + DGK + + G D +GR+ A +
Sbjct: 240 GCQVPIAGFAKMDEDGVIELTGLVASPDGKTVYRETVKGK--DPEAVGRECAAVMSEKGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KALID 302
>gi|138896211|ref|YP_001126664.1| porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2]
gi|196250167|ref|ZP_03148861.1| porphobilinogen deaminase [Geobacillus sp. G11MC16]
gi|158513835|sp|A4IRG5|HEM3_GEOTN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134267724|gb|ABO67919.1| Porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2]
gi|196210351|gb|EDY05116.1| porphobilinogen deaminase [Geobacillus sp. G11MC16]
Length = 309
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 118/304 (38%), Positives = 174/304 (57%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L + P + + TKGDR+ + TL+++GGKGL
Sbjct: 2 RNIVVGSRRSKLALTQTNWVINELKRLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE ++++G ID AVHS KDMP L GL I + RED+RDV +S SL DL
Sbjct: 60 FVKEIEHEMLTGGIDMAVHSMKDMPAVLPSGLVIGSVPRREDVRDVLVSKGNLSLSDLPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL +R D+++ RG I+TRL KL N AI+LA AG+ R+ +
Sbjct: 120 GAVIGTSSLRRSAQLLAYRPDVTIKWIRGNIDTRLAKLKNEDYDAIVLAAAGLARMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ + P+ GQGA+ +E ++ + +E + +N E T +V ERAFL +++G
Sbjct: 180 DVISEYLSPDVCVPAVGQGALAVECREDDVELREWLSRLNDEQTERAVRAERAFLQQMEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A K ++ +V + DGK ++ G D +GR AA + K
Sbjct: 240 GCQVPIAGYAEVKEGMVHLTALVASPDGKEKYKEIVIG--ADPEEVGRQAAALLSEQGAK 297
Query: 303 NVFN 306
+
Sbjct: 298 ELIE 301
>gi|86359485|ref|YP_471377.1| porphobilinogen deaminase [Rhizobium etli CFN 42]
gi|86283587|gb|ABC92650.1| porphobilinogen deaminase protein [Rhizobium etli CFN 42]
Length = 309
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 166/306 (54%), Positives = 216/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H + I+ L+TKGDRIT+R L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHNLSEEMFEIVVLTTKGDRITDRPLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D
Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL+ + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGSVETRLRKLDEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +VI ++L+ + FPP+P QGAICIE+ V + K +L+ +N T+DSV+CERAFLA L
Sbjct: 181 KVEVITDVLDPDTFPPAPAQGAICIESRVGDTKIDDLLAAVNDATTFDSVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|159903036|ref|YP_001550380.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211]
gi|238058998|sp|A9BEB6|HEM3_PROM4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|159888212|gb|ABX08426.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211]
Length = 316
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 105/309 (33%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR S LA+ + L H P NI I ++T+GD+I + L +IG
Sbjct: 1 MVLDQLRIATRRSKLAMVQTHWVKEQLEKAH--PGINISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNKSLKDKQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LHELPPGTILGTSSLRRLAQLRHHYPHLIFKDVRGNLITRLEKLDAGAYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + +++ E + GQGA+ IE N P+ E++K + HE+T ER+FL
Sbjct: 179 RLGFGDRVHQLIPCEISLHAVGQGALGIECVENKPEVLEIIKSLEHEETSQRCLSERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + G L G+V + DGK + S+ G++ + IG++ A ++
Sbjct: 239 RELEGGCQVPIGVNSQISGQDLILTGMVASLDGKKLIKDSKRGDKSNPELIGKELANELK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 SQGAMEILQ 307
>gi|302038053|ref|YP_003798375.1| porphobilinogen deaminase [Candidatus Nitrospira defluvii]
gi|300606117|emb|CBK42450.1| Porphobilinogen deaminase [Candidatus Nitrospira defluvii]
Length = 310
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +GTR S LA+ + ++ L ++ P I + + T GD+I + L +IGG
Sbjct: 1 MNRSTLILGTRGSKLAVHQSQWVQARLQEL--APGLTISLQRIQTSGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE L+S EID AVHS KD+PT L +GL I PRED RD I+ L
Sbjct: 59 KGLFVKEIEDALLSKEIDLAVHSMKDVPTALPEGLDILCVPPREDPRDALITRDGCRLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR+A LL +R D ++ RG ++TRL KL + AI+LA AG++RL
Sbjct: 119 LKPGAKIGTSSLRRQAQLLHYRPDFTIEMLRGNLDTRLRKLREGQFDAIVLAAAGLRRLA 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L + P+ QGA+ IE ++ +EL+ H T +V ERA L L
Sbjct: 179 WDAEITEYLPVHLSLPAIAQGALGIEARSDDTFVRELLSRFEHRPTRITVTAERALLHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA A +G L G+V + DG+ G +A +G A+ +
Sbjct: 239 EGGCQVPIAAHAALEGDRLTVDGLVASVDGRRVIRHQIQGPASEAQALGTKLAERLLADG 298
Query: 301 NKNVF 305
+
Sbjct: 299 GDVIL 303
>gi|288818572|ref|YP_003432920.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|288787972|dbj|BAI69719.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|308752163|gb|ADO45646.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
Length = 304
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 116/300 (38%), Positives = 174/300 (58%), Gaps = 6/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L + H + ++ ++T GD+I + L +IGGKGLF
Sbjct: 3 LRIGTRKSKLALWQANFVKEKLEKM----GHQVDLVHITTSGDKILDVPLAKIGGKGLFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ EID AVHS KD+P L +GL+I A RE+ DV IS L++L ++
Sbjct: 59 KEIEEALMKKEIDLAVHSLKDVPMNLPEGLKIGAVTERENPFDVLISKDHLPLEELPSNA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ + R R D+ V RG ++TR+ KL+ HA++LAYAG+KR+ E I
Sbjct: 119 KVGTSSLRRQVQIKRRRGDLRVEMLRGNVDTRIRKLDEGLYHAVILAYAGVKRMGLEDRI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L EDF P+ GQG++ IE ++ +E+V +H ++ CERAFL EL G C+
Sbjct: 179 TQVL--EDFIPAVGQGSLAIEIRQDDSAVEEIVSCFDHYESRLRAECERAFLRELQGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +++ +G T++ G V +G F E R+G +A IG+ A + +
Sbjct: 237 VPIGAYSWIEGDTIFIKGFVSDLEGIKFIEGMRSGEAKEAQQIGKSLAHDLLREGADQIL 296
>gi|218190145|gb|EEC72572.1| hypothetical protein OsI_06012 [Oryza sativa Indica Group]
Length = 358
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 127/306 (41%), Positives = 182/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL
Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+
Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-D-AINIGRDAAQYIRFIS 300
C++ IA +A K F G++ + DG +E SR G+ D + +G+DA ++ +
Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGSYDFDIMVEMGKDAGHELKAKA 349
Query: 301 NKNVFN 306
F+
Sbjct: 350 GPGFFD 355
>gi|190893753|ref|YP_001980295.1| porphobilinogen deaminase [Rhizobium etli CIAT 652]
gi|190699032|gb|ACE93117.1| porphobilinogen deaminase protein [Rhizobium etli CIAT 652]
Length = 309
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 166/306 (54%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D
Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICIESRIGDSRIDDLLAAVNDAATFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|115444475|ref|NP_001046017.1| Os02g0168800 [Oryza sativa Japonica Group]
gi|75259105|sp|Q6H6D2|HEM3_ORYSJ RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|49388602|dbj|BAD25717.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group]
gi|113535548|dbj|BAF07931.1| Os02g0168800 [Oryza sativa Japonica Group]
gi|222622259|gb|EEE56391.1| hypothetical protein OsJ_05540 [Oryza sativa Japonica Group]
Length = 358
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 127/306 (41%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL
Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+
Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-D-AINIGRDAAQYIRFIS 300
C++ IA +A K F G++ + DG +E SR G D + +G+DA ++ +
Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKA 349
Query: 301 NKNVFN 306
F+
Sbjct: 350 GPGFFD 355
>gi|118581775|ref|YP_903025.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379]
gi|158512569|sp|A1AUE7|HEM3_PELPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118504485|gb|ABL00968.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379]
Length = 310
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 166/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR S LAL A +S L + P + + + T GDRI + L ++GG
Sbjct: 1 MPPRQLRIGTRASQLALWQANWVKSELEK--RYPAMEVTLTKIKTMGDRILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD +S A
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVVSR-AARFSH 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+LRR+A LL R D+ ++ RG +ETR+ KL+ A++LA AG+KRL
Sbjct: 118 LPPGARVGTSALRRQAQLLHARPDLEMVTIRGNVETRIRKLDEENLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E L++E P+ GQGA+ IE +++P E + NH DT +V ERA L
Sbjct: 178 LTQRVAEYLDVEFSIPAIGQGALGIECRLSDPVVTEAIAFFNHPDTSHAVRAERALLRRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IA +G L G++ A DG+ F +G ++G + A +
Sbjct: 238 QGGCQVPIAAHGTIRGGELRLVGLIAAVDGREFVRDEISGPVDQCEHLGEELADRLLSRG 297
Query: 301 NKNVFN 306
+ +
Sbjct: 298 GRAILE 303
>gi|94969590|ref|YP_591638.1| porphobilinogen deaminase [Candidatus Koribacter versatilis
Ellin345]
gi|123256362|sp|Q1INI6|HEM3_ACIBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94551640|gb|ABF41564.1| hydroxymethylbilane synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 311
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 169/302 (55%), Gaps = 6/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LAL A + L + H + + + T GD+I + L ++G KG+F
Sbjct: 3 TLRIGSRGSQLALWQANHISALLRER----GHEVELEIIKTTGDKILDVALAKVGTKGMF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE+ L +G++D AVHS KD+PT+L +G +++A RE+ RDVF+S S+ L
Sbjct: 59 TKEIEEALAAGKVDVAVHSLKDLPTELPQGFELAAVTKRENPRDVFLSVKYDSISGLPQG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A + R D+ + RG ++TR+ KL + AI+LA+AG+ RL K ++
Sbjct: 119 AKVGTSSLRRQAQIKAIRPDLEIFPLRGNVDTRVRKLEQGEYDAIILAFAGLNRLGKTQL 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+KEI++ + P+ GQGA+ IE + + + +E++ +N D + ERA L +L G C
Sbjct: 179 VKEIISEDVMCPAAGQGALGIEIRLGDTRMREILSFLNDYDARATTTAERALLNQLGGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I FA K ++ I DG S++G D ++G + + + +
Sbjct: 239 QVPIGAFAEVKDGQVHLTAICARPDGSEILRESKSG--ADPAHLGEEVGKTLLARGATKI 296
Query: 305 FN 306
Sbjct: 297 LE 298
>gi|16330297|ref|NP_441025.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803]
gi|2495177|sp|P73660|HEM3_SYNY3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|1652786|dbj|BAA17705.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803]
Length = 320
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LAL + + L P + + T+GD+I + L +IG KGLF
Sbjct: 9 TVRIGSRKSQLALVQTYWVQEELQK--HFPDRQFDVETMETQGDKILDVALAKIGDKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDL 121
T+E+E ++ D AVHS KD+PT L GL + R + D + H + L L
Sbjct: 67 TQELEDGMLGKRTDLAVHSLKDLPTNLPAGLMLGCVTKRVNPADALVLNAKHQGKDLASL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A L ++ D RG + TRL KL++N+ AI+LA AG++RL
Sbjct: 127 PEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDSNEYDAIILAAAGLERLDM 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I +++ E + GQGA+ IE + + L+KV+ E++ D ERAFL +L+
Sbjct: 187 ANRIDQLIPPEISLHAVGQGALGIECREGDQEILSLLKVLEDENSRDRCLAERAFLRQLE 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + G L G+V + DG+ + + + R +A +G+D A +R
Sbjct: 247 GGCQVPIGVNTHLDGDNLTLTGMVASLDGQRLIKDTLSAPRKEAEKLGQDLALKLREQGA 306
Query: 302 KNVF 305
+
Sbjct: 307 GEIL 310
>gi|27117223|emb|CAD48146.1| porphobilinogen deaminase [Bacillus megaterium]
Length = 310
Score = 371 bits (952), Expect = e-101, Method: Composition-based stats.
Identities = 119/305 (39%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L P I + TKGD+I N TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L
Sbjct: 60 FVKEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ +
Sbjct: 120 GAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSK 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G
Sbjct: 180 DTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+ G + +V + DGK ++ G D I IG +AA+ +
Sbjct: 240 GCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--DPIAIGSEAAERLTSQGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KLLID 302
>gi|261856741|ref|YP_003264024.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2]
gi|261837210|gb|ACX96977.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2]
Length = 319
Score = 371 bits (952), Expect = e-101, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 157/301 (52%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ L +H P + ++ ++TKGD++ + L +IGGKGLF
Sbjct: 11 IRIATRESPLAMWQTEFVADELRRLH--PGLRVELVSMTTKGDQLLDSPLAKIGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + GL++ A L D RD F+S+ +SL L +
Sbjct: 69 KELELALMDGRADIAVHSMKDVPMRFPDGLELIAILEGHDPRDAFVSNEYESLAALPAGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ + + + RG I++R+ KL+ AI+LA AG+KR+ + I
Sbjct: 129 VVGTSSLRRETQIRSRYPQLEIKMLRGNIQSRMAKLDRGDYDAIILAAAGLKRMGYDARI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E+ PS GQGA+ IE ++ L+ + H T V ERAF L+G C+
Sbjct: 189 RAELSPEESLPSVGQGALGIEARSDDAAIHALIAPLIHAATTTRVLAERAFNTRLNGGCQ 248
Query: 246 SAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
I G+A + L+ G+V DG + G + +G A+ + +
Sbjct: 249 VPIGGYAMLQDDGNLWLRGMVGRPDGTLTLRDEITGAATEGEALGVALAERMLAAGADKI 308
Query: 305 F 305
Sbjct: 309 L 309
>gi|114308050|gb|ABI59293.1| hydroxymethylbilane synthase [Nitrosomonas eutropha C91]
Length = 334
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 164/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IGGK
Sbjct: 29 SPEKIVIASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGK 86
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L G D AVHS KD+P + G +++A RED RD F+S+ SL++L
Sbjct: 87 GLFIKELELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEEL 146
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+
Sbjct: 147 PTGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLEL 206
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I ++ E P+ GQGA+ IE N+P E +K ++H T V ERA L
Sbjct: 207 GYRISMLIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLG 266
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ + GFA L G V DG G +G AQ ++
Sbjct: 267 GSCQVPLGGFAEIFEGVLTLRGFVATPDGSKIIADKLCGKPESGERVGEQLAQNLKTHGA 326
Query: 302 KNVF 305
+ +
Sbjct: 327 EEIL 330
>gi|159045244|ref|YP_001534038.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12]
gi|157913004|gb|ABV94437.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12]
Length = 347
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 127/303 (41%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR S LALA A ETR+ L +P I+ + T GDRI +R+L+EIGGKGLF
Sbjct: 40 PLKIGTRGSLLALAQAHETRARLSAAFDLPEEAFEIVVIKTTGDRIQDRSLSEIGGKGLF 99
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE ++ G ID AVHS KDMP GL + YLPRED+RD F++ +L DL
Sbjct: 100 TREIEDAMLDGSIDIAVHSMKDMPVDTPAGLALDTYLPREDVRDAFVTLDGGTLADLPEG 159
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+G+SSLRR+A L R D+ +++FRG ++TR+ KL + AHA LA AG+ RL ++V
Sbjct: 160 AVVGSSSLRRRAQLAHRRPDLQLVEFRGNVQTRMKKLGDGVAHATFLAMAGLNRLGMDEV 219
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QG I IE ++P+A E++ I+ + + CERA+L+ LDGSC
Sbjct: 220 PRSAIAPEDMLPAVAQGCIGIERRADDPRAAEMLAAIHDGPSGHRLACERAYLSALDGSC 279
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G +++ +L DG S DA +GR+ A+ +R +
Sbjct: 280 QTPIAGLAELDGGSIHLRAEILRPDGSEVLSDSETAPVEDAAKMGREVAERLRARAPDGF 339
Query: 305 FNF 307
F++
Sbjct: 340 FSW 342
>gi|118602764|ref|YP_903979.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|226740639|sp|A1AX51|HEM3_RUTMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118567703|gb|ABL02508.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 304
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 166/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A + L H P ++++ ++TKGD+I N L++IGGKG
Sbjct: 2 NKTLKIATRQSPLALWQAQNVKIRLEKHH--PDLTVILVEMTTKGDQILNSPLSKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++ G D AVHS KD+P ++ +G ++ A L RE+ D F+S+ S+ DL
Sbjct: 60 LFIKELEVSMMKGITDIAVHSMKDVPYEIPQGFKLGAILKRENPFDAFVSNDFSSIDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ +GT S+RR L R D+ ++D RG + TRL KL+ I+LA AG+ RL E
Sbjct: 120 QNAKVGTCSIRRIVQLKAIRPDLKILDLRGNVNTRLKKLDKGGFDGIILACAGLIRLGFE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
IK+ ++ + P+ GQG + IE N+ + +L+K + +T V+ ERA A L+G
Sbjct: 180 SRIKQQISDQQSLPAVGQGVVGIEIRENDTEILDLIKPLIDVETTYMVSAERAMNARLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C IAGFA + G+V D + + + A +G + A + + K
Sbjct: 240 GCSVPIAGFALIDNEQIMLTGLVGNVDTGVILKEQILSHVSQAEALGVELANKLISLGAK 299
Query: 303 NVF 305
++
Sbjct: 300 DIL 302
>gi|194017264|ref|ZP_03055876.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061]
gi|194011132|gb|EDW20702.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061]
Length = 311
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 179/305 (58%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L
Sbjct: 60 FVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLRLHELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ +
Sbjct: 120 GAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSK 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+V+ E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++DG
Sbjct: 180 EVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + G+V ++DG + +G+ D IG A+ +
Sbjct: 240 SCQVPIAGYATINERDEIELTGLVASADGHTIIRETVSGS--DPEAIGTACAKQMADKGA 297
Query: 302 KNVFN 306
K++ +
Sbjct: 298 KDLID 302
>gi|291288798|ref|YP_003505614.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809]
gi|290885958|gb|ADD69658.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809]
Length = 308
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 171/306 (55%), Gaps = 5/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A+ TR L H + + + + TKGD+I + L +IGG
Sbjct: 1 MEK--VVIATRGSNLALWQAYYTRDRLQKEHGV---EVELNIIKTKGDKILDVPLAKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ LI G+ D AVHS KD+P ++ +GL++ A D F+S + +
Sbjct: 56 KGLFVKEIEQALIDGKADIAVHSMKDVPMEMPEGLELYASPEGASPYDCFVSVKYNEVVE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRRK LL+ R D+ + D RG + TRL KL + I+LA AG+ RL+
Sbjct: 116 LPQGAVVGTSSLRRKLQLLKMRPDLVIKDLRGNVNTRLAKLEAGEFDGIVLAKAGLVRLE 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
VIKE + P+ QGA+ + N+ + +EL++ + T V+ ERAFL L
Sbjct: 176 LGHVIKETFTADQMLPACCQGALGFQIRANDTRMKELLRFMKDPATETKVSMERAFLRRL 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ IAG + GS + GIV A DG+ F E G+ DA +G + A+ +
Sbjct: 236 EGGCQAPIAGHSVLTGSKICMKGIVAALDGRTFIEQFIEGHAEDAEKLGLELAERVLNAG 295
Query: 301 NKNVFN 306
K++
Sbjct: 296 AKDILE 301
>gi|224826001|ref|ZP_03699104.1| porphobilinogen deaminase [Lutiella nitroferrum 2002]
gi|224601638|gb|EEG07818.1| porphobilinogen deaminase [Lutiella nitroferrum 2002]
Length = 311
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 108/297 (36%), Positives = 165/297 (55%), Gaps = 2/297 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF
Sbjct: 3 KIVIASRESKLAMWQAEHIKARLEQLY--PQLAVEILGMTTQGDQILDKTLSKIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A RED RD F+S+T SL +L
Sbjct: 61 VKELELALQEGRADLAVHSIKDVPMNLPEGFALAAICEREDPRDAFVSNTYASLSELPDG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR++ L +++ RG ++TRL KL++ + AI+LA AG+KRL+
Sbjct: 121 AVVGTSSLRRESQLRARFPRLTIKPLRGNVQTRLRKLDDGEFDAIILAAAGLKRLELSAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L + P+ GQGA+ IE + +L+ ++H DT V+ ERA L GSC
Sbjct: 181 IRCELAPSESLPAVGQGALGIEIRADRADLMQLLAPLDHADTHACVSAERALSRVLGGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ + GFA + G V DG + S + R A +GR AQ +
Sbjct: 241 QIPLGGFATLSDDVITLGGFVAHPDGSVMLTASASAPREYADALGRAVAQKLLDAGA 297
>gi|33866317|ref|NP_897876.1| porphobilinogen deaminase [Synechococcus sp. WH 8102]
gi|39931373|sp|Q7U5C2|HEM3_SYNPX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33639292|emb|CAE08300.1| Porphobilinogen deaminase [Synechococcus sp. WH 8102]
Length = 317
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 160/313 (51%), Gaps = 9/313 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNANHK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L +S D RG + TRL KL++ ++LA AG++
Sbjct: 119 LDTLPEGAVVGTSSLRRLAQLRHHYPHLSFKDVRGNVITRLEKLDSGDYDCLILAAAGLE 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + + GQGA+ IE + P+ E++KV+ H T ERAFL
Sbjct: 179 RLGFGNRIHQIIPGDISLHAVGQGALGIECVEDKPEVLEIIKVLEHTTTSRRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK +G+ D +IG + A ++
Sbjct: 239 RELEGGCQVPIGVNSQINNEELTLTGMVASLDGKRLIRDEASGSAADPESIGIELAGKLK 298
Query: 298 FISN----KNVFN 306
K +F+
Sbjct: 299 HQGAGAILKEIFD 311
>gi|209551271|ref|YP_002283188.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537027|gb|ACI56962.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 309
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 163/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L +GE+D AVHSAKDMPTKL GL +SAYLPREDIRD I TA L D
Sbjct: 61 KGLFTEELEQQLTTGELDFAVHSAKDMPTKLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +V+ +IL+ + FPP+P QGAIC+E+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICLESRIGDTQIDDLLAPVNDAATFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|16079867|ref|NP_390693.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
168]
gi|238054381|sp|P16616|HEM3_BACSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|143037|gb|AAA22512.1| porphobilinogen deaminase [Bacillus subtilis]
gi|2635280|emb|CAB14775.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. subtilis str. 168]
Length = 314
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 3 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 61 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKK 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ +
Sbjct: 121 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 181 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 240
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG++ G + G+V + DGKI + + GN D +G+ A +
Sbjct: 241 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGN--DPEEVGKRCAALMADKGA 298
Query: 302 KNVFN 306
K++ +
Sbjct: 299 KDLID 303
>gi|294501421|ref|YP_003565121.1| porphobilinogen deaminase [Bacillus megaterium QM B1551]
gi|294351358|gb|ADE71687.1| porphobilinogen deaminase [Bacillus megaterium QM B1551]
Length = 310
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L P I + TKGD+I N TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L
Sbjct: 60 FVKEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ +
Sbjct: 120 GAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSK 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G
Sbjct: 180 DTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+ G + +V + DGK ++ G + + IG +AA+ +
Sbjct: 240 GCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--NPVAIGSEAAERLTSQGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KLLID 302
>gi|157693217|ref|YP_001487679.1| porphobilinogen deaminase [Bacillus pumilus SAFR-032]
gi|167008811|sp|A8FFV2|HEM3_BACP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157681975|gb|ABV63119.1| hydroxymethylbilane synthase [Bacillus pumilus SAFR-032]
Length = 311
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 178/305 (58%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L
Sbjct: 60 FVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLHLHELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ +
Sbjct: 120 GAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSK 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+V+ E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++DG
Sbjct: 180 EVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + G+V ++DG + +G D IG A+ +
Sbjct: 240 SCQVPIAGYATMNERDEIELTGLVASADGHTIIRETVSGT--DPEAIGTACAKQMADKGA 297
Query: 302 KNVFN 306
K++ +
Sbjct: 298 KDLID 302
>gi|221310755|ref|ZP_03592602.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
168]
gi|221315080|ref|ZP_03596885.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319999|ref|ZP_03601293.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324281|ref|ZP_03605575.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
SMY]
Length = 313
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 60 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ +
Sbjct: 120 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG++ G + G+V + DGKI + + GN D +G+ A +
Sbjct: 240 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGN--DPEEVGKRCAALMADKGA 297
Query: 302 KNVFN 306
K++ +
Sbjct: 298 KDLID 302
>gi|74318586|ref|YP_316326.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259]
gi|123772872|sp|Q3SFT5|HEM3_THIDA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|74058081|gb|AAZ98521.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259]
Length = 306
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 112/302 (37%), Positives = 160/302 (52%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R L ++H P + I+ ++T+GD+I + TL++IGGKGLF
Sbjct: 3 TLTIASRESALAMWQAEHIRDRLRELH--PECKVNILGMTTRGDQILDVTLSKIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L +GE D AVHS KD+P +L G +++ RED RD F+S+ L DL
Sbjct: 61 VKELEVALAAGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A L ++V RG + TRL KL+ + AILLA AG+KRL
Sbjct: 121 SVVGTSSLRREAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
IK +L++E+ P+ GQGA+ IE N ++ +N T V ER L GSC
Sbjct: 181 IKSLLSVEESIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A K L G V DG F G+ D +G+ A + + V
Sbjct: 241 QVPLGAHASYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAV 300
Query: 305 FN 306
+
Sbjct: 301 LD 302
>gi|303274460|ref|XP_003056550.1| porphobilinogen deaminase, chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226462634|gb|EEH59926.1| porphobilinogen deaminase, chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 376
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 123/308 (39%), Positives = 181/308 (58%), Gaps = 4/308 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60
+ +IGTR SPLALA A+ TR L + I + T GD++ ++ L +IGG
Sbjct: 60 EPIVKIGTRGSPLALAQAYMTRDLLKKNFVELSEEGALEICIIKTTGDKVLDQPLADIGG 119
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +
Sbjct: 120 KGLFTRELDVALLDGRIDIAVHSMKDVPTYLPEGSILPCMLPREDVRDAFISVKYDDLSE 179
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+
Sbjct: 180 LPDGALVGTASLRRQSQLLAKFPTLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMD 239
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +IL + P+ QGAI I + + E ++ +NHE+T +V CERAFLA L
Sbjct: 240 MTEHATKILETDVMLPAVAQGAIGIACRTGDSRQLEFLEKLNHEETRIAVECERAFLASL 299
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRF 298
DGSC++ IAG+AY G+ L F G+V + DGK E +R+ N DAI+ G+DA ++
Sbjct: 300 DGSCRTPIAGYAYKSGNNLEFRGLVASLDGKQILETTRSSNWSFTDAIDAGKDAGNELKA 359
Query: 299 ISNKNVFN 306
++ F
Sbjct: 360 LAPSEFFE 367
>gi|150387913|ref|YP_001317962.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF]
gi|229836103|sp|A6TJD5|HEM3_ALKMQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|149947775|gb|ABR46303.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF]
Length = 316
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 116/303 (38%), Positives = 172/303 (56%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +IG+R S LAL A + L + K P + II ++T GDRI ++TL +IGGKGL
Sbjct: 2 RTIKIGSRASQLALVQAEIIINMLKE--KFPQYTYEIIKITTLGDRILDKTLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+K L +ID A+HS KDMP + + L + A RED RDV I+ +SL++L
Sbjct: 60 FVKEIQKALAEEKIDLAIHSMKDMPGETPEELVLGAITKREDPRDVLITRENKSLEELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+VIG+SSLRR+A ++ R DI V+ RG + TRL K+ ++LA AG+ RL ++
Sbjct: 120 GAVIGSSSLRRQAQVMALRGDIKVVPIRGNVGTRLGKIETESLDGVILAAAGLNRLGLKE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I L IEDF P+ GQGA+ E + + E++ INHE+T+ V ERAFL L+G
Sbjct: 180 KISSYLEIEDFTPAVGQGALGCEARRKDIEMLEMLLAINHEETYRCVMAERAFLKLLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C I + +G L+ G+V +SDG+ + G+ D +G + + K
Sbjct: 240 CHVPIGAYGQQQGQELHMTGMVASSDGRRVIKEQVMGDIADFQALGIQLGETLIEKGAKE 299
Query: 304 VFN 306
+
Sbjct: 300 ILE 302
>gi|328541997|ref|YP_004302106.1| Porphobilinogen deaminase [polymorphum gilvum SL003B-26A1]
gi|326411747|gb|ADZ68810.1| Porphobilinogen deaminase [Polymorphum gilvum SL003B-26A1]
Length = 302
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 143/300 (47%), Positives = 193/300 (64%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A ETR+ LM H + I+ + T GDRI +R L+E+GGKGLFT
Sbjct: 1 MRIGTRGSALALAQAHETRARLMAAHGLAEDAFEIVVIKTSGDRILDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A+ L DL +
Sbjct: 61 KEIEEALLDDRIDLAVHSSKDMPTLLPDGLALTAFLPREDVRDAFVSPKAKMLMDLPQGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL V+
Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNVQTRLQKLEDGAVDATLLAYAGLRRLGLADVV 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+ + F P+ GQGAICIE+ V + L+ I+ +T + ERAFLAELDGSC+
Sbjct: 181 TSLLDTDAFLPAVGQGAICIESRVEDAATLGLLAAIHDRETEIRLTAERAFLAELDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ I G A G L GI+L DG HE++R G DA IGR+A + ++ F
Sbjct: 241 TPIGGLARIDGDRLSLAGIILRPDGSEAHEIAREGAVADAEAIGREAGRTLKAAGGPGFF 300
>gi|19849543|gb|AAL12220.1| porphobilinogen deaminase [Triticum aestivum]
Length = 308
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 130/305 (42%), Positives = 187/305 (61%), Gaps = 5/305 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A +TR L H + I I+ + T GD I ++ L +IGGKGLF
Sbjct: 1 RIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIVIIKTTGDMILDKPLADIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L
Sbjct: 61 TKEIDDALLQGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVI ++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 121 SVIASASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLGMPET 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+L++++ P+ QGAI I N+ K E + +NHEDT +V CER FL+ LDG+C
Sbjct: 181 ATSVLSVDEMLPAVAQGAIGITCRSNDDKMMEYLSSLNHEDTRLAVACEREFLSVLDGNC 240
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISN 301
++ IA +AY F G++ + DG I +E SR+G D + +G+DA ++ +
Sbjct: 241 RTPIAAYAYRDKDGNCSFRGLLASPDGSIVYETSRSGTYSFDDMVALGQDAGHELKSKAG 300
Query: 302 KNVFN 306
F+
Sbjct: 301 PGFFD 305
>gi|148241995|ref|YP_001227152.1| porphobilinogen deaminase [Synechococcus sp. RCC307]
gi|158513324|sp|A5GSE0|HEM3_SYNR3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|147850305|emb|CAK27799.1| Porphobilinogen deaminase [Synechococcus sp. RCC307]
Length = 317
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L + H P I I ++T+GD+I + L +IG
Sbjct: 1 MTASSLRIASRRSQLAMVQTEWVRDELANAH--PGLEISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H +
Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVMHAKNKDLT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVITRLEKLDSGQFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECRDGDAAVLEQIKVLEHRPTSLRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I +G L G+V + DGK + A ++G A+ +R
Sbjct: 239 RTLEGGCQVPIGVNTRFEGDELVLTGMVASLDGKQLIRDELRAPQDQAEDLGNRLAELLR 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 SQGAGEIL 306
>gi|167630035|ref|YP_001680534.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1]
gi|167592775|gb|ABZ84523.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1]
Length = 315
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 161/303 (53%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL L +++ P + + TKGD+I + L +IG KG
Sbjct: 5 QRPVVIGTRDSALALWQTHWVLERLKELY--PEQAFEVKHIKTKGDKILDVALAKIGDKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E +++GEID AVHS KD+PT L +G I A RED RD+ IS L++L
Sbjct: 63 LFTKELEVAMLNGEIDMAVHSMKDLPTLLPEGCAIGAICVREDCRDILISRNGGGLEELP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRKA + + R D+ ++D RG ++TR+ K+ ++LA AG+KRL
Sbjct: 123 RGAKVGTASLRRKAQIWKVRPDLELVDIRGNLQTRMRKMEEQNLDGLILAAAGVKRLGWA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E + ++ P+ GQG++ IE + LV +NH ++ V ERA L L+G
Sbjct: 183 EKITEYIPVDMCLPAVGQGSVGIEIREGDEAIGRLVAALNHAESALCVRAERALLRTLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I G L G+V + DG+ G+ D G A+ + +
Sbjct: 243 GCQVPIGSLGRLSGGKLIVDGVVASLDGRTICRDRVEGDPADPEEAGVRLAKKLLQQGAR 302
Query: 303 NVF 305
+
Sbjct: 303 EIL 305
>gi|148244854|ref|YP_001219548.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA]
gi|226740640|sp|A5CW34|HEM3_VESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146326681|dbj|BAF61824.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA]
Length = 304
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 168/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A +S L ++ P ++++ ++TKGD+I N +L++IGGKG
Sbjct: 2 NKTLKIATRQSPLALWQAQHVKSRLEKIY--PNLTVILVKITTKGDQILNSSLSKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++ G D AVHS KD+P ++ + ++ A L E+ D F+S+ S+ DL
Sbjct: 60 LFIKELEISIMKGMSDIAVHSMKDVPYEIPQEFELGAILKCENPFDAFVSNHFSSIDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ +GT S+RR L R D+ +ID RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 120 KNAKVGTCSMRRILQLKVIRPDLQIIDLRGNVNTRLKKLDDGEFDAIILACAGLIRLGFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
IK+ + P+ GQGAI IE N+ + +L+K + +T + ERA +L+G
Sbjct: 180 NRIKQQIPENQNLPAVGQGAIGIEIRENDKEILDLIKPLIDIETSYRIIAERAMNTQLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C +AGFA + G+V D + + G+ A +G + A + + K
Sbjct: 240 GCSVPVAGFATINNKQITLTGLVGNIDTGVILKEKIFGHVSQAEILGIELANKLILLGAK 299
Query: 303 NVF 305
++
Sbjct: 300 DIL 302
>gi|15617181|ref|NP_240394.1| porphobilinogen deaminase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681931|ref|YP_002468317.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682486|ref|YP_002468870.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471641|ref|ZP_05635640.1| porphobilinogen deaminase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11386824|sp|P57651|HEM3_BUCAI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800236|sp|B8D8F3|HEM3_BUCA5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800237|sp|B8D8B0|HEM3_BUCAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|25292183|pir||H84998 hydroxymethylbilane synthase (EC 4.3.1.8) [imported] - Buchnera sp.
(strain APS)
gi|10039246|dbj|BAB13280.1| porphobilinogen deaminase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622219|gb|ACL30375.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624774|gb|ACL30929.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086313|gb|ADP66395.1| porphobilinogen deaminase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086887|gb|ADP66968.1| porphobilinogen deaminase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087477|gb|ADP67557.1| porphobilinogen deaminase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087959|gb|ADP68038.1| porphobilinogen deaminase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 314
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 175/306 (57%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL + ++ ++ P NI ++P+ T GD I N++L++IGG
Sbjct: 1 MYNKTLRIATRKSPLALKQTKYVQKKILSLY--PDLNIKLVPIVTHGDNILNKSLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ + D A+HS KD+P K+ K L + + R + D +S+ QS+
Sbjct: 59 KGLFIKELELALLENKADIAIHSMKDLPVKITKELCLVSICKRGNALDSLVSNNYQSINQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L+ +R D+ + RG IETR+ KL+ K AI+LA G+ RL+
Sbjct: 119 LPKGAIVGTSSLRRQCQLITYRPDLIISPLRGNIETRIAKLDQGKYDAIILATEGLNRLR 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +I+ E PS GQGAI I++ +++ K + +NH +T+ +N ERAF +L
Sbjct: 179 LKNRITQIIPAELSLPSCGQGAIGIQSRLHDKKVLFFLSRLNHINTFIEINAERAFCRKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ C+ I +A K + ++ G+V + +GKI + R G +G A +
Sbjct: 239 ESGCQIPIGSYAILKKNKIWLRGLVGSPNGKIILKGERIGCYNTGEKMGYSLADELLKNG 298
Query: 301 NKNVFN 306
KN+ N
Sbjct: 299 AKNILN 304
>gi|161594062|ref|NP_899724.2| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472]
gi|55976482|sp|Q7P207|HEM3_CHRVO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 111/298 (37%), Positives = 165/298 (55%), Gaps = 2/298 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF
Sbjct: 3 KIVIASRESRLAMWQAEHIQARLQALY--PHLTVEILGMTTQGDQILDKTLSKIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L+ G D AVHS KD+P L G ++A RED RD F+S+ Q L +L
Sbjct: 61 VKELEQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A L ++V RG ++TRL KL++ + AI+LA AG+KRL +
Sbjct: 121 SVVGTSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAER 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L + P+ GQGA+ IE + L+ +NH DT ERA EL GSC
Sbjct: 181 IQGELAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+ + FA TL G+V DG + S +G A +GR A+ + +
Sbjct: 241 QVPLGAFATLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGAR 298
>gi|71909286|ref|YP_286873.1| porphobilinogen deaminase [Dechloromonas aromatica RCB]
gi|123733070|sp|Q479S8|HEM3_DECAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71848907|gb|AAZ48403.1| Porphobilinogen deaminase [Dechloromonas aromatica RCB]
Length = 311
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 109/307 (35%), Positives = 162/307 (52%), Gaps = 3/307 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I +R S LA+ A R L ++ P +VI+ ++TKGD+I +R L EIG
Sbjct: 1 MSRPSKIVIASRESRLAMWQAVHVRDRLSSLN--PGAEVVILGMTTKGDQILDRPLAEIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E + G+ AVHS KD+P + +G ++A RE+ RD F+S+ L
Sbjct: 59 GKGLFIKELEVAMQEGKAHLAVHSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +++GTSSLRR+++L + + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 119 DLPAGAIVGTSSLRRESILRAKYPQLVIKSLRGNLDTRLKKLDAGEYDAIILAAAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E IK +L E P+PGQGA+ IE ++V +N +T V ERAF
Sbjct: 179 GMENRIKSVLTAEQSLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRA 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ + G+A L+ G V +DG+ GN D +G A +R
Sbjct: 239 LGGSCQVPLGGYAIIDNGQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELRAK 298
Query: 300 SNKNVFN 306
+
Sbjct: 299 GADAILE 305
>gi|291485230|dbj|BAI86305.1| porphobilinogen deaminase [Bacillus subtilis subsp. natto BEST195]
Length = 314
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 3 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFVFEIKEIVTKGDRIVDVTLSKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 61 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKE 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ +
Sbjct: 121 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 181 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 240
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG++ G + G+V + DGKI + + GN D +G+ A +
Sbjct: 241 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGN--DPEEVGKRCAALMADRGA 298
Query: 302 KNVFN 306
K++ +
Sbjct: 299 KDLID 303
>gi|269213761|ref|ZP_05982800.2| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685]
gi|269145303|gb|EEZ71721.1| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685]
Length = 325
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 169/307 (55%), Gaps = 2/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVFNF 307
+ +
Sbjct: 313 ARELIEV 319
>gi|321312347|ref|YP_004204634.1| porphobilinogen deaminase [Bacillus subtilis BSn5]
gi|320018621|gb|ADV93607.1| porphobilinogen deaminase [Bacillus subtilis BSn5]
Length = 313
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 60 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ +
Sbjct: 120 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG++ G + +V + DGKI + + GN D +G+ A +
Sbjct: 240 GCQVPIAGYSVLNGQDEIEMTALVASPDGKIIFKETVTGN--DPEEVGKRCAALMADKGA 297
Query: 302 KNVFN 306
K++ +
Sbjct: 298 KDLID 302
>gi|284799715|ref|ZP_05984671.2| hydroxymethylbilane synthase [Neisseria subflava NJ9703]
gi|284797316|gb|EFC52663.1| hydroxymethylbilane synthase [Neisseria subflava NJ9703]
Length = 323
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFTLAAISERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRVRYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEELI 317
>gi|304309752|ref|YP_003809350.1| Porphobilinogen deaminase [gamma proteobacterium HdN1]
gi|301795485|emb|CBL43683.1| Porphobilinogen deaminase [gamma proteobacterium HdN1]
Length = 311
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 120/305 (39%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR S LAL A R+ L+ H P ++ II ++TKGD+I + L +IGG
Sbjct: 1 MSNHRIRIATRESALALWQAEHVRACLLAAH--PGLDVEIIGMTTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL +S L RED RD F+S+ +L
Sbjct: 59 KGLFVKELEVAMLEGIADIAVHSMKDVPVDFPEGLGLSVILEREDPRDAFVSNQYDTLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GT SLRR+ L R DI +++ RG + +RL KL+ + AILLA AG+KRL
Sbjct: 119 LPLGARVGTCSLRRQTQLRARRPDIEILELRGNVNSRLAKLDAGQFDAILLAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ P+ GQGAI IE ++ + L+ +NH DT V+ ERA L
Sbjct: 179 FHERIRATLDPAASLPAVGQGAIGIECRTDDARTLALLAPLNHPDTHTCVSAERAMNHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A G LY G+V DG G R DA +G A +
Sbjct: 239 QGGCQVPIAGYAELHGDQLYMRGLVGEPDGSRILRAEIRGARADAAALGAALADDLLAQG 298
Query: 301 NKNVF 305
K +
Sbjct: 299 AKEIL 303
>gi|260435886|ref|ZP_05789856.1| porphobilinogen deaminase [Synechococcus sp. WH 8109]
gi|260413760|gb|EEX07056.1| porphobilinogen deaminase [Synechococcus sp. WH 8109]
Length = 317
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 106/308 (34%), Positives = 152/308 (49%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + + A
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNTKNHAYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L SV+GTSSLRR A L + D RG + TRL KL+N ++LA AG+
Sbjct: 119 LDTLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDNGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE P+ E +KV+ H T ERAFL
Sbjct: 179 RLGFGDRIHQLIPGDISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G DA IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQASGAASDAEAIGIALANTLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 GQGAGEIL 306
>gi|224094087|ref|XP_002310073.1| predicted protein [Populus trichocarpa]
gi|222852976|gb|EEE90523.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 140/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHSDLAEEGAIQIVIIKTTGDKIQSQPLADIGGKGL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 175
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S+IGT+SLRRK+ +L +SV + FRG ++TRL KLN A LLA AG+KRL
Sbjct: 176 GSIIGTASLRRKSQILHRYPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL ++D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG
Sbjct: 236 ENVTSILPLDDMLPAVAQGAIGIACRSNDDKMVNYLASLNHEETRLAVACERAFLETLDG 295
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG+ E SR G D I +G+DA + +
Sbjct: 296 SCRTPIAGYARKDENGDCIFKGLVASPDGRRVLETSRKGPYAFDDMIAMGKDAGKELLSQ 355
Query: 300 SNKNVFN 306
+ F+
Sbjct: 356 AGPGFFD 362
>gi|295706769|ref|YP_003599844.1| porphobilinogen deaminase [Bacillus megaterium DSM 319]
gi|294804428|gb|ADF41494.1| porphobilinogen deaminase [Bacillus megaterium DSM 319]
Length = 310
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 166/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L P I + TKGD+I N TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L
Sbjct: 60 FVKEIEQAMLDEEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+
Sbjct: 120 GAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNKDYDAIILAAAGLSRMGWSR 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G
Sbjct: 180 DTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+ G + +V + DGK ++ G D + IG AA+ +
Sbjct: 240 GCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEQITGK--DPVAIGSAAAERLTSQGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KLLID 302
>gi|313673928|ref|YP_004052039.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312940684|gb|ADR19876.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 308
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 157/306 (51%), Gaps = 4/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A +S L ++ P + + + T+GD I + L +IGG
Sbjct: 1 MEK--ITIATRGSKLALWQANHIKSLL--TNRYPEMLVELKIIKTQGDIILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE LI E D AVHS KD+P +L L+I RE D F+S +L +
Sbjct: 57 KGLFVKEIENALIENEADLAVHSMKDVPVELPDELEIYVNPHRESPFDAFLSVKYNNLDE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRK + R R DI + D RG ++TR+ KL AI+LA AG+ RL
Sbjct: 117 LPRGAKLGTSSLRRKVQISRIRPDIEITDLRGNVDTRIRKLTEGTFDAIILARAGLNRLN 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ K + + PS QG + IE ++ + + ++K + E T ERAFL L
Sbjct: 177 LLEWAKYTFDDSEIVPSVCQGTLGIEVRKDDDRIKNILKFMKDEKTEIVTRAERAFLRRL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ I G+ +G L G + + DG F + G+ +G A+ I
Sbjct: 237 EGGCQAPIGGYCKIEGGKLKMIGFLSSLDGDEFLKYEEYGDMDKPEVLGESVAEKILING 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 GKKILD 302
>gi|315122376|ref|YP_004062865.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495778|gb|ADR52377.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 307
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 243/307 (79%), Positives = 276/307 (89%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME+K F+IGTR SPLALAHAFETRS LM VHKIP I ++PLSTKGDRITNRTLTEIGG
Sbjct: 1 MEEKDFKIGTRRSPLALAHAFETRSYLMSVHKIPLEKIFVVPLSTKGDRITNRTLTEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEEIE+KLISGEID AVHSAKDMPTKLLKGL+ISAYLPRED+RDVFISHTAQSL D
Sbjct: 61 KGLFTEEIERKLISGEIDFAVHSAKDMPTKLLKGLRISAYLPREDVRDVFISHTAQSLND 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA++S++GTSSLRRKALLLRWR+D+S+IDFRGKIETRL KL N +A A+LLAYAGIKRLK
Sbjct: 121 LAVNSIVGTSSLRRKALLLRWRADLSIIDFRGKIETRLTKLKNKQADAMLLAYAGIKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KE V+KEILN+EDFPPSPGQGAICIETH+NN +A EL INH +TWD+V+CERAFLAEL
Sbjct: 181 KESVVKEILNLEDFPPSPGQGAICIETHMNNTRAHELATAINHRETWDTVSCERAFLAEL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSCKSAIAGF+YCKG +LYFYG +L DGKIFHEVS++GN CDAI IGRDA ++IR I+
Sbjct: 241 DGSCKSAIAGFSYCKGQSLYFYGTILTPDGKIFHEVSKSGNCCDAIQIGRDAGRHIRLIA 300
Query: 301 NKNVFNF 307
+K +FN
Sbjct: 301 DKTIFNL 307
>gi|23099523|ref|NP_692989.1| porphobilinogen deaminase [Oceanobacillus iheyensis HTE831]
gi|39931547|sp|Q8CXC0|HEM3_OCEIH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|22777752|dbj|BAC14024.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Oceanobacillus iheyensis HTE831]
Length = 309
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 169/304 (55%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LAL L + I + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIVGTRKSNLALTQTEWVIDQLKKAGV--KNEFEIKKIVTKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIEK + EID AVHS KDMP + +GL IS+ RED RD +++ L+DL
Sbjct: 60 FVKEIEKAMFDKEIDLAVHSMKDMPAVIPEGLTISSIPEREDHRDAYLAKDNILLQDLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A +L R D+++ RG IETR+ KL AI+LA +G+KR+ E
Sbjct: 120 GAIVGTSSLRRGAQILAERPDLTIKWIRGNIETRIRKLQEEDYDAIILAVSGLKRVGLSE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++I E L E P+ GQGA+ IE+ ++ + +VK I+ T +V+ ER FL L+G
Sbjct: 180 ELITEYLEPEVCVPAVGQGALAIESREDDEELTNIVKKIHDAYTAKTVSAERTFLHLLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I G+AY G + +V DG + + G + +G++AA+ + K
Sbjct: 240 GCQVPIGGYAYLDGDEVVLTALVGDPDGTTILKETVRGT--EPTEVGKEAAELLISQGAK 297
Query: 303 NVFN 306
+ +
Sbjct: 298 EIVD 301
>gi|78187286|ref|YP_375329.1| porphobilinogen deaminase [Chlorobium luteolum DSM 273]
gi|123757188|sp|Q3B2Z5|HEM3_PELLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78167188|gb|ABB24286.1| Porphobilinogen deaminase [Chlorobium luteolum DSM 273]
Length = 313
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 122/307 (39%), Positives = 166/307 (54%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPDLEITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS T L DL
Sbjct: 60 LFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 KNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+VKV+NH T ERA L L G
Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSTTEYCCKAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDAAQYIRF 298
C+ I +A K TL+ V ++DG I + A G + A+ +
Sbjct: 240 GCQIPIGAYASFKNGTLHLLAFVGSTDGTIGIRDEITKTGLTSPSQAEEAGIELAKELLK 299
Query: 299 ISNKNVF 305
+ +
Sbjct: 300 QGAEKIL 306
>gi|56964395|ref|YP_176126.1| porphobilinogen deaminase [Bacillus clausii KSM-K16]
gi|61213279|sp|Q5WEP5|HEM3_BACSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56910638|dbj|BAD65165.1| porphobilinogen deaminase [Bacillus clausii KSM-K16]
Length = 311
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 175/305 (57%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IGTR S LAL L + P+ + + TKGDRI + TL+++GGKGL
Sbjct: 2 RKIVIGTRRSKLALTQTNWVIDQLKQLGV--PYEFEVKEIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L SGEID AVHS KD+P++LL+ ++A RED RDV +S +L +L
Sbjct: 60 FVKEIEAALRSGEIDVAVHSMKDVPSELLEEFTLAAITEREDPRDVLVSENGHTLDELPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A +L R D+ V RG +ETRL KL AI+LA AG+KRL E
Sbjct: 120 GAIVGTSSLRRSAQILHRRPDVQVKWIRGNVETRLRKLKEEDFSAIVLAAAGLKRLGYGE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ + P+ GQGA+ +E V++ + EL+ ++HE+T +V ERAFL E++G
Sbjct: 180 DVITEYLDKDVCLPAIGQGALGLECRVDDVETTELLAKLHHEETGKAVLAERAFLKEMNG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I G+A + ++ G+V + DGK + + G D +G++ + +
Sbjct: 240 GCQVPIGGYATVLEDGAVFLTGLVGSPDGKTILKEGKCGMVAD--ELGKEVSSLLTAQGA 297
Query: 302 KNVFN 306
+
Sbjct: 298 GAILE 302
>gi|318041172|ref|ZP_07973128.1| porphobilinogen deaminase [Synechococcus sp. CB0101]
Length = 317
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 105/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H+ I I ++T+GD+I + L +IG
Sbjct: 1 MAASQLRIASRRSQLAMVQTHWVRDELAKAHE--GLEITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDTAVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DG+ G++ D IG A +R
Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGQRLIRDEARGDQKDPEAIGIALAHALR 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 AQGAGEILE 307
>gi|310643595|ref|YP_003948353.1| phosphate abc transporter, atpase subunit [Paenibacillus polymyxa
SC2]
gi|309248545|gb|ADO58112.1| Phosphate ABC transporter, ATPase subunit [Paenibacillus polymyxa
SC2]
Length = 308
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 165/304 (54%), Gaps = 4/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMD--VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +G+R S LAL L VI + TKGDRI + TL+++GGK
Sbjct: 2 RTIVVGSRQSALALTQTGHVIEDLNALCAEHGLDLQFVIKKILTKGDRILDVTLSKVGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+DL
Sbjct: 62 GLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLEDL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+
Sbjct: 122 PSGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + E P+ GQGA+ IE ++ + L+++ NH+DT +V ER FL L+
Sbjct: 182 KDRITSYIPEEACLPAVGQGALGIECRASDEELLALLRLYNHQDTSATVEAERTFLGVLN 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A G + G+V + DG++ + + GN D +G A +
Sbjct: 242 GGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGN--DPQKLGEAVAASLIAKGA 299
Query: 302 KNVF 305
+ +
Sbjct: 300 EQIL 303
>gi|126725997|ref|ZP_01741839.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150]
gi|126705201|gb|EBA04292.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150]
Length = 313
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 129/305 (42%), Positives = 181/305 (59%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P +IGTR SPLALA A ETR L H + P I+ + T GD + +R L EIGGKG
Sbjct: 7 QSPLKIGTRGSPLALAQAHETRDRLSKAHNLAPEAFEIVVIKTTGDIVQDRPLKEIGGKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE+ ++SG+ID AVHS KDMP + GL I+ YLPRED+RD F+S +A S DL
Sbjct: 67 LFTKEIEEAMLSGDIDIAVHSMKDMPVEQPDGLAITCYLPREDVRDAFVSLSADSFDDLR 126
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL
Sbjct: 127 QGATVGSSSLRRRAQLAHRRPDLNLVEFRGNVQTRMRKLGDGVADATFLAMAGLIRLGMS 186
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + L + F P+ QGAI IE + + E++ I+ + T D + ERAFLA ++G
Sbjct: 187 DVARLPLETDVFLPAVAQGAIGIEQRIGDSVISEMLTAIHDQHTGDLLAAERAFLARVEG 246
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A L+F +L DG + +G D IGR A + +
Sbjct: 247 SCQTPIAGLAEIIDGKLHFRAEILRPDGSEAITGAASGEIADGAAIGRQVADDLLARAPT 306
Query: 303 NVFNF 307
F +
Sbjct: 307 GFFEW 311
>gi|261418339|ref|YP_003252021.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61]
gi|297529191|ref|YP_003670466.1| porphobilinogen deaminase [Geobacillus sp. C56-T3]
gi|319767702|ref|YP_004133203.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52]
gi|261374796|gb|ACX77539.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61]
gi|297252443|gb|ADI25889.1| porphobilinogen deaminase [Geobacillus sp. C56-T3]
gi|317112568|gb|ADU95060.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52]
Length = 310
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 117/304 (38%), Positives = 173/304 (56%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L + P + + TKGDR+ + TL+++GGKGL
Sbjct: 2 RNIVVGSRRSKLALTQTKWVINELKQLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL
Sbjct: 60 FVKEIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLPP 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
SVIGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ +
Sbjct: 120 GSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++G
Sbjct: 180 DVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A G + +V + DGK ++ G D +GR AA + K
Sbjct: 240 GCQVPIAGYAEADGGMVRLTALVASPDGKEKYKEMVTG--ADPEAVGRQAAAVLIEQGAK 297
Query: 303 NVFN 306
+
Sbjct: 298 ALIE 301
>gi|116793769|gb|ABK26871.1| unknown [Picea sitchensis]
Length = 373
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 135/307 (43%), Positives = 190/307 (61%), Gaps = 5/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGL
Sbjct: 67 VRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGL 126
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L
Sbjct: 127 FTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQA 186
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL +
Sbjct: 187 GSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQ 246
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGS
Sbjct: 247 HVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGS 306
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300
C++ IAG+A K F G++ + DG E SR G D +++G DA + ++ +
Sbjct: 307 CRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTYEDMVSMGVDAGKELKERA 366
Query: 301 NKNVFNF 307
F++
Sbjct: 367 GPAFFDW 373
>gi|88705502|ref|ZP_01103212.1| Porphobilinogen deaminase [Congregibacter litoralis KT71]
gi|88700015|gb|EAQ97124.1| Porphobilinogen deaminase [Congregibacter litoralis KT71]
Length = 308
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLAL A+ R +L++ H P + ++ ++++GD+I + L ++GGKGLF
Sbjct: 5 VVIATRESPLALWQAYFVRDTLLETH--PGITVELLGMTSRGDQILDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G AVHS KD+P + +GL+++ RE+ D F+S+ ++L L +
Sbjct: 63 KELETALLDGRAHIAVHSMKDVPMEFPEGLELAVICEREEPADAFVSNRYENLDALPAGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ V RG + TRL KL+ + A++LA AG+ RL+ + I
Sbjct: 123 IVGTSSLRRECQLRANRPDLEVRFLRGNVNTRLRKLDEGEYDAVILACAGLIRLEMGERI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + D P+ GQGA+ IE ++ ++L++ ++H T + V ERA L G C+
Sbjct: 183 RARIPVTDSLPAGGQGAVGIEIRSDDSATRKLLEPLHHGPTAERVLAERALNRRLQGGCE 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA +A +G L+ G+V DG G+R + +G A + +
Sbjct: 243 VPIASYAVHEGDELWLRGLVGRPDGSHTLRADARGSREEPEALGIAVADSLLEAGAAEIL 302
>gi|241759313|ref|ZP_04757419.1| hydroxymethylbilane synthase [Neisseria flavescens SK114]
gi|241320449|gb|EER56746.1| hydroxymethylbilane synthase [Neisseria flavescens SK114]
Length = 325
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEELI 317
>gi|301062020|ref|ZP_07202731.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2]
gi|300443871|gb|EFK07925.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2]
Length = 316
Score = 367 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 115/300 (38%), Positives = 170/300 (56%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + + L H ++ +I + T GD+I + L++IGGKGLF
Sbjct: 3 IRIGTRGSKLALTQSEWIKEQLEIRHS--GIHVDLIKIKTTGDKILDTPLSKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHS KD+P +L + L +S + PRED D I+ + L L +
Sbjct: 61 KEIEEALLQNRIDVAVHSMKDVPAELPEALMLSTFPPREDPSDALIAQENRRLDQLPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A LL R D++++ RG ++TRL KL + + A++LA AG+ RL VI
Sbjct: 121 RVGTSSLRRGAQLLHLRPDLTLVPLRGNVDTRLGKLKSGEVEAVILATAGLNRLGLSGVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ +E ++ + + +NH+DT +V ER FL L+G C+
Sbjct: 181 TQRIPFHQLLPAVGQGALGLEVRRDDRETIRRLDFLNHDDTRTAVTAERGFLKTLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAGFA G L F G+V DG ++ G+R DA IG +AA+ + +V
Sbjct: 241 VPIAGFAQIVGDNLSFEGLVAELDGSRIYKEIATGSRDDAEKIGIEAAKTLLSSGAGDVL 300
>gi|308273123|emb|CBX29726.1| Porphobilinogen deaminase [uncultured Desulfobacterium sp.]
Length = 323
Score = 367 bits (944), Expect = e-99, Method: Composition-based stats.
Identities = 120/304 (39%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IGTR S LAL A +S L V K ++ + + TKGDRI + L ++GGKG
Sbjct: 17 KRKIIIGTRGSKLALWQAEWVKSYL--VQKFTDLSVELKIIKTKGDRILDVALAKVGGKG 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L ID AVHS KDMP L GL I A RE+ RDV IS L L
Sbjct: 75 LFVKEIEQSLADSSIDIAVHSMKDMPADLHDGLCIGAIPERENPRDVLISGKGLLLSQLP 134
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A + R R D+ + RG ++TR+NKL + AI+LA AG+KRL E
Sbjct: 135 EGALVGTSSLRRIAQIKRIRPDLVIAPLRGNLDTRINKLEMGEIDAIILAAAGVKRLGLE 194
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
K+I E LN + P+ GQGA+CIE ++ + +NH T V ERAFL ++G
Sbjct: 195 KIITEYLNEDTMLPAVGQGALCIEIRKDDHDISGFINEMNHFVTRAVVLGERAFLKRIEG 254
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+ + G+V DGK ++ G+ + +IG A + + K
Sbjct: 255 GCQVPIAGYGKVENDIFIIRGLVADPDGKTIITDTQRGSLESSESIGAALADRLISMGAK 314
Query: 303 NVFN 306
+ +
Sbjct: 315 RLLD 318
>gi|319780787|ref|YP_004140263.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166675|gb|ADV10213.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 308
Score = 367 bits (944), Expect = e-99, Method: Composition-based stats.
Identities = 141/304 (46%), Positives = 207/304 (68%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKG
Sbjct: 2 QTILRIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ +L
Sbjct: 62 LFTKEIEEALLAGRIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKVAKAIAELP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL A +LAYAG+KRL E
Sbjct: 122 RGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLEEGVAAGTILAYAGLKRLGLE 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ +++ ++ FPP+PGQGAI IET + + ++++ ++ T ++ CERAFLA LDG
Sbjct: 182 HVVTDLIPLDVFPPAPGQGAIGIETRIGDRDVEKMLAAVHDVPTGQALACERAFLAALDG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG+A + L F G++++ DG H V G+ DA IG +AA+ +R + +
Sbjct: 242 SCRTPIAGYAAIEAGKLSFAGLIISPDGTQSHTVELQGSAQDAARIGGEAARSVRARAGE 301
Query: 303 NVFN 306
F+
Sbjct: 302 KFFD 305
>gi|303247619|ref|ZP_07333890.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ]
gi|302491099|gb|EFL50993.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ]
Length = 310
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 161/304 (52%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ I TR S LAL A + L + H P + ++P+ TKGDRI + L ++GGKG
Sbjct: 2 RDKLVIATRGSKLALWQANHVAARLKEAH--PGLAVDLLPIKTKGDRILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P + GL + RED D+ +S L L
Sbjct: 60 LFVKEIEEALLDGRADLAVHSMKDVPAEQPAGLVVGITPKREDPCDMLLSVAYDGLDALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRKA L R D++++D RG ++TR+ KL + AI++A AG+ RL
Sbjct: 120 EGAKVGTSSLRRKAQLTALRPDLAIVDLRGNLDTRVGKLTDGLFDAIVVARAGLNRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E L F P+ QGA+ IE ++ + ++ +H ++ D+V ERAFL L+G
Sbjct: 180 APKSERLCPPRFLPAAAQGALGIEYRFDDRETAAMLAFFDHPESRDAVAAERAFLGRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA A G+ + G+V D G R DA+ +G+ A + + +
Sbjct: 240 GCQVPIAAHAVIDGNLISIDGLVADPDTGRTFRDVATGKRDDAVELGKKLADSVLAMGAR 299
Query: 303 NVFN 306
+ +
Sbjct: 300 AILD 303
>gi|319639194|ref|ZP_07993945.1| porphobilinogen deaminase [Neisseria mucosa C102]
gi|317399378|gb|EFV80048.1| porphobilinogen deaminase [Neisseria mucosa C102]
Length = 325
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEELI 317
>gi|85705298|ref|ZP_01036397.1| porphobilinogen deaminase [Roseovarius sp. 217]
gi|85670171|gb|EAQ25033.1| porphobilinogen deaminase [Roseovarius sp. 217]
Length = 315
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 184/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEVFEIVVIKTTGDQIIDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L++GEID AVHS KDMP +GL + YLPRED+RD F+S SL DL
Sbjct: 71 TREIEQALLTGEIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPLVGSLADLPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V
Sbjct: 131 ALVGTSSLRRKAQVLVAYPHLQVVEFRGNVQTRLKKLADGVATCTFLAMAGLNRLGRSEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ E P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC
Sbjct: 191 ATGAIDPEVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G+TL G +L DG ++ D ++GR A + +
Sbjct: 251 ETPIAGLAELNGNTLRLRGEILRPDGSESLTDDQSAPIEDGADLGRAMAAKLLAQAGPGF 310
Query: 305 FNF 307
F++
Sbjct: 311 FDW 313
>gi|148909210|gb|ABR17705.1| unknown [Picea sitchensis]
Length = 373
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 135/307 (43%), Positives = 190/307 (61%), Gaps = 5/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGL
Sbjct: 67 VRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGL 126
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L
Sbjct: 127 FTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQA 186
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL +
Sbjct: 187 GSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQ 246
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGS
Sbjct: 247 HVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGS 306
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300
C++ IAG+A K F G++ + DG E SR G D +++G DA + ++ +
Sbjct: 307 CRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTHEDMVSMGVDAGKELKERA 366
Query: 301 NKNVFNF 307
F++
Sbjct: 367 GPAFFDW 373
>gi|225075410|ref|ZP_03718609.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens
NRL30031/H210]
gi|224953228|gb|EEG34437.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens
NRL30031/H210]
Length = 325
Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEELI 317
>gi|116872985|ref|YP_849766.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123466350|sp|A0AJ05|HEM3_LISW6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|116741863|emb|CAK20987.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 309
Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats.
Identities = 113/307 (36%), Positives = 169/307 (55%), Gaps = 7/307 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKE--QYPEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L + ID AVHS KD+P+ L +GL I A RE D F+ + SL DL
Sbjct: 60 LFVSEVEQALSNSTIDFAVHSMKDVPSSLEEGLVIGAIPKRESPLDCFVFNQVSSLDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL+ R D ++ RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 KGAIVGTSSLRRAAQLLKHRPDFNIRPIRGNIDTRLQKLHVENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIAPEVCLPAVGQGALAIECRESDQLIRDMLATIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA G ++F G+V +DG E G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKIGEQIHFKGLVGNADGSKILESKEIG--ENPGQIGNKVAEVLLSE 297
Query: 300 SNKNVFN 306
+ +
Sbjct: 298 GAETIIE 304
>gi|260464233|ref|ZP_05812426.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075]
gi|259030036|gb|EEW31319.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075]
Length = 308
Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats.
Identities = 138/304 (45%), Positives = 206/304 (67%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKG
Sbjct: 2 QTTLKIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+L RED RD ++ +++ DL
Sbjct: 62 LFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLSREDARDAYVGKATKTIADLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL +
Sbjct: 122 RGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLD 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA LDG
Sbjct: 182 HVVTDLIPLDVFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG+A +G L F G++++ DG H + G DA IG +AA+ +R + +
Sbjct: 242 SCRTPIAGYAAIEGGKLSFAGLIISPDGTQSHTIDLQGPAQDAALIGTEAARTVRAKAGE 301
Query: 303 NVFN 306
F+
Sbjct: 302 KFFD 305
>gi|332978074|gb|EGK14812.1| hydroxymethylbilane synthase [Desmospora sp. 8437]
Length = 367
Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 159/303 (52%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LA+ + D + + + T+GD+I N TL+++GGKGL
Sbjct: 60 RTIVVGTRRSQLAVTQTQWVMEQVRDRLPQ-GWQMEMEKMVTRGDQILNVTLSKVGGKGL 118
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G ID AVHS KDMP ++ +GL A RED RD +S + L DL
Sbjct: 119 FVKEIEQALLDGRIDFAVHSMKDMPGEMPEGLIFGAVTRREDPRDCLLSRKGEGLDDLPE 178
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ +GTSSLRR+A LL +R D+ V RG + TR KL + + AI+LA AGI R+
Sbjct: 179 NACVGTSSLRRQAQLLAYRPDLRVEPVRGNLNTRYQKLMDGQFDAIILAQAGIARMDWTD 238
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +++ E P+ GQGA+ ++ ++ + EL+ +N T +V ER FL +G
Sbjct: 239 KVTQVVPEEVMLPAVGQGALAVQCRRDDQELLELLAEVNDPVTERAVTAERTFLQAFEGG 298
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C IAG A G + G+V G G D + +GR A+ + ++
Sbjct: 299 CHLPIAGRATVDGERIRLRGLVAHPSGTPILREEAEG--ADPVELGRRLARELMEKGARS 356
Query: 304 VFN 306
+
Sbjct: 357 LLE 359
>gi|296331638|ref|ZP_06874107.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675403|ref|YP_003867075.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151233|gb|EFG92113.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413647|gb|ADM38766.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 313
Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 60 FVKEIEQALLNEDIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNHVKLSEMKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL R DI++ RG I+TRL KL AI+LA AG+ R+ +
Sbjct: 120 GAVIGTSSLRRSAQLLIERPDITIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L + P+ GQGA+ IE ++ + L E T +V ERA+L ++G
Sbjct: 180 DVVTEFLEPDRCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAYLNAMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG++ + + G+V + DGKI + + GN D +G+ A +
Sbjct: 240 GCQVPIAGYSVLNEQDEIELTGLVTSPDGKIIFKETVTGN--DPEEVGKRCAALMADKGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KELID 302
>gi|167626913|ref|YP_001677413.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189028091|sp|B0TW04|HEM3_FRAP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167596914|gb|ABZ86912.1| Hydroxymethylbilane synthase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 300
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 168/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL + + I + T+GD I ++ L +IGGK L
Sbjct: 2 KQIVIASRESKLALWQTNYVKDRIQQEL---NIRCQINTMKTQGDIILDKPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E +++ + D AVHS KD+P +L +G +S+++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLSSFMPREDPRDAFVSNKYSSIDDLPR 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRYDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELNE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D + +G+ AQ + +
Sbjct: 239 CHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLTGD--DPMRLGKLLAQEMIELGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|116254224|ref|YP_770062.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258872|emb|CAK09980.1| putative porphobilinogen deaminase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 309
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 163/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D
Sbjct: 61 KGLFTEELEQKLTAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGEVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARIDDLLAPVNDIMTFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|87302648|ref|ZP_01085465.1| porphobilinogen deaminase [Synechococcus sp. WH 5701]
gi|87282992|gb|EAQ74949.1| porphobilinogen deaminase [Synechococcus sp. WH 5701]
Length = 317
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 105/309 (33%), Positives = 148/309 (47%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MAGTTLRIASRRSQLAMVQTHWVRDELTRAH--PDLEISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + H S
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPDGLMLGCITEREDPADALVLHERHRGCS 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHFQFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGHRIDALIDPSISLHAVGQGALGIECRHGDSAVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+L+G C+ I + +G L G+V + DG G + D +G AQ +R
Sbjct: 239 RQLEGGCQVPIGVNSRFEGEELVLTGMVASLDGLRLIRDEARGPQQDPEAVGTSLAQLLR 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 SQGAGEILE 307
>gi|145220050|ref|YP_001130759.1| porphobilinogen deaminase [Prosthecochloris vibrioformis DSM 265]
gi|189028096|sp|A4SFJ8|HEM3_PROVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145206214|gb|ABP37257.1| porphobilinogen deaminase [Chlorobium phaeovibrioides DSM 265]
Length = 313
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 121/307 (39%), Positives = 172/307 (56%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEYTKAEL--SRHFPDLDITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS + DL
Sbjct: 60 LFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKNGVKMLDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 KNAKVATSSLRRMSQLKSLRPDFDIKDIRGNLNTRFQKFDEGEFDAMMLAYAGVYRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+VKV+NH +T ER+ L L G
Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSNTEYCCKAERSLLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNG--NRCDAINIGRDAAQYIRF 298
C+ I +A K TL+ V + DG I +E+++ G + A G + A+ +
Sbjct: 240 GCQIPIGSYASFKNGTLHLLAFVGSVDGTKGIRNEITKTGLTSPAQAEAAGIELAEELLK 299
Query: 299 ISNKNVF 305
+ +
Sbjct: 300 QGAEEIL 306
>gi|78185247|ref|YP_377682.1| porphobilinogen deaminase [Synechococcus sp. CC9902]
gi|123770934|sp|Q3AWQ4|HEM3_SYNS9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78169541|gb|ABB26638.1| hydroxymethylbilane synthase [Synechococcus sp. CC9902]
Length = 317
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H +
Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + + GQGA+ IE N P E++KV+ H T ERAFL
Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENQPDVMEIIKVLEHGPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G D +IG + A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREQASGPSTDPESIGLELAATLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 GLGAGEIL 306
>gi|2495180|sp|Q43082|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|313724|emb|CAA51820.1| hydroxymethylbilane synthase [Pisum sativum]
Length = 369
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 142/307 (46%), Positives = 190/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 62 IRIGTRGSPLALAQAHETRDKLMASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPA 181
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ +L ++V D FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 182 GSVIGTASLRRKSQILHRYPSLTVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMT 241
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + L+I+D P+ QGAI I N+ K E + +NHE+T +++CERAFL LDG
Sbjct: 242 ENVTSTLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDG 301
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A K F G+V + DG E SR G+ D + IG+DA + +
Sbjct: 302 SCRTPIAGYASRDKDGNCLFRGLVASPDGTRVLETSRIGSYTYEDMMKIGKDAGEELLSR 361
Query: 300 SNKNVFN 306
+ FN
Sbjct: 362 AGPGFFN 368
>gi|37522781|ref|NP_926158.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421]
gi|55976479|sp|Q7NGF7|HEM3_GLOVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|35213783|dbj|BAC91153.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421]
Length = 328
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 106/309 (34%), Positives = 154/309 (49%), Gaps = 7/309 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG+R S LAL R L H P I+ + T+GD+I + L +IG KG
Sbjct: 2 SRTVIIGSRDSQLALVQTHWVRDELQRAH--PDIRFEIVEMKTQGDKILDVALAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E ++ D AVHS KD+PT L GL + A RED D I L
Sbjct: 60 LFTKELESAMLEKRTDLAVHSLKDLPTALPPGLILGAITEREDPSDAVIVRRGLEAAGLA 119
Query: 120 DLALHSVIGTSSLRRKALLLRWRSD-ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL +V+GTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++R
Sbjct: 120 DLPEGAVVGTSSLRRLAQLKHHYGERLRFQDIRGNLNTRLRKLDEGRYDAIVLAVAGMRR 179
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I E+L+ + + GQGA+ IE + + +L+ V+NH T ERA L
Sbjct: 180 LGWSERISEVLSPDISLHAVGQGALGIECREADGEILDLLTVLNHPPTARRCRAERAMLR 239
Query: 239 ELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I + L GIV + DG+ R+G +GR A+ ++
Sbjct: 240 ALEGGCQVPIGVYTELDDSGRLTLQGIVASLDGRNMARACRSGPGDAPEALGRAVAEDLK 299
Query: 298 FISNKNVFN 306
+ + +
Sbjct: 300 AAGAQAILD 308
>gi|311069308|ref|YP_003974231.1| porphobilinogen deaminase [Bacillus atrophaeus 1942]
gi|310869825|gb|ADP33300.1| porphobilinogen deaminase [Bacillus atrophaeus 1942]
Length = 313
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ L ++ P + I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIKKLEEI--DPSYTFEIKEIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS Q L D+
Sbjct: 60 FVKEIEQALLNEDIDMAVHSMKDMPASLPEGLTIGCIPKREDPRDALISKRHQKLSDIKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
VIGTSSLRR A LL R D+++ RG I+TRL+KL AI+LA AG+ R+ +
Sbjct: 120 GGVIGTSSLRRSAQLLVERPDLTIKWIRGNIDTRLHKLETEDYDAIILAAAGLSRMGWKD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G
Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLRLFSQFTDEYTKRTVLAERAFLNAMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + G+V + DGK + GN D IG+ A +
Sbjct: 240 GCQVPIAGYATINDQDEVQLTGLVASPDGKTIFKEKVAGN--DPEEIGKRCAALMSDKGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KALID 302
>gi|332284596|ref|YP_004416507.1| porphobilinogen deaminase [Pusillimonas sp. T7-7]
gi|330428549|gb|AEC19883.1| porphobilinogen deaminase [Pusillimonas sp. T7-7]
Length = 315
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 111/308 (36%), Positives = 164/308 (53%), Gaps = 4/308 (1%)
Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + P I TR S LAL A R L ++ P + ++ ++T+GD+I +R+L+++
Sbjct: 1 MSEAPAKLVIATRASRLALWQAEHVRDRLQTLY--PQCQVSLLTMTTRGDQILDRSLSKV 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E L+ G D AVHS KD+P + +S L R+D RD F+S+ SL
Sbjct: 59 GGKGLFVKELETALLDGRADLAVHSLKDVPVDMQSPFALSVILERDDPRDAFVSNDYSSL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL SV+GTSSLRR+A + + + V RG ++TRL KL+ AI+LA AG++R
Sbjct: 119 DDLPAGSVVGTSSLRREAQIRQRYPQLQVQPLRGNLDTRLGKLDRGDYAAIILASAGLRR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L E I+ LN E P+ GQGA+ IE + Q + ++ DT ERA
Sbjct: 179 LGLEARIRSHLNPEQSLPAAGQGALGIEILESRSDMQTWLAPLSDPDTTACALAERAVSR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L GSC+ +A FA G+TL G+V DG +G+ A +G A +
Sbjct: 239 VLGGSCQVPLAAFAQRDGNTLMVRGLVAEPDGSRIIRAQVSGDVSQAEELGVRIANELLE 298
Query: 299 ISNKNVFN 306
+ + +
Sbjct: 299 EGARIILD 306
>gi|56421180|ref|YP_148498.1| porphobilinogen deaminase [Geobacillus kaustophilus HTA426]
gi|61213219|sp|Q5KWK6|HEM3_GEOKA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56381022|dbj|BAD76930.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Geobacillus kaustophilus HTA426]
Length = 309
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 118/304 (38%), Positives = 174/304 (57%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L + P + + TKGDR+ + TL+++GGKGL
Sbjct: 2 RNIVVGSRRSKLALTQTKWVINELKQLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL
Sbjct: 60 FVKEIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVSRREDARDVLVSKGNRMLSDLPP 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
SVIGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ +
Sbjct: 120 GSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++G
Sbjct: 180 DVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A K T+ +V + DGK ++ G D +GR AA + K
Sbjct: 240 GCQVPIAGYAEVKEGTVRLTALVASPDGKEMYKEIVTG--ADPEAVGRQAAAILSEQGAK 297
Query: 303 NVFN 306
+
Sbjct: 298 ALIE 301
>gi|212703312|ref|ZP_03311440.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098]
gi|212673272|gb|EEB33755.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098]
Length = 311
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 158/305 (51%), Gaps = 3/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K I TR S LAL A ++ L + P NI + + T+GD I + L+++GGKG
Sbjct: 2 RKNLVIATRGSQLALWQAEHVKACLESLE--PGLNISLRVIKTRGDIILDVPLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P L +GL + RE D +S+ SL +L
Sbjct: 60 LFVKEIEEALLDGSADLAVHSIKDVPMVLPEGLVLGCVPQREICVDCLLSNRYGSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A LL R D+ ++ RG ++TRL K+ + AI+LA AG+KRL
Sbjct: 120 PGARVGTSSLRRQAQLLNLRPDLEILSLRGNVDTRLRKMKEGEYDAIVLASAGLKRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
F P+ GQGA+ IE ++ + EL+ + H T V ER FLA LDG
Sbjct: 180 ADRMHHFEAASFVPAVGQGALGIECRGDDGEVLELLSRMEHRPTRICVEAERGFLAGLDG 239
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG A G+V DG + + G A G A+++
Sbjct: 240 GCQVPIAGHAEMLDDDRFILDGLVAEVDGSVILREQQEGTAATARETGFALARHLLDKGG 299
Query: 302 KNVFN 306
K++ +
Sbjct: 300 KDILD 304
>gi|308174513|ref|YP_003921218.1| porphobilinogen deaminase [Bacillus amyloliquefaciens DSM 7]
gi|307607377|emb|CBI43748.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens DSM 7]
gi|328554432|gb|AEB24924.1| porphobilinogen deaminase [Bacillus amyloliquefaciens TA208]
gi|328912836|gb|AEB64432.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens LL3]
Length = 313
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIQEIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L D+
Sbjct: 60 FVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ +
Sbjct: 120 GGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++G
Sbjct: 180 DVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTKRTVAAERAFLHAMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + G+V + DGK ++ + G+ D IG+ A +
Sbjct: 240 GCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGH--DPEEIGKRCAAMMSEKGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KALID 302
>gi|78212229|ref|YP_381008.1| porphobilinogen deaminase [Synechococcus sp. CC9605]
gi|123729770|sp|Q3ALS9|HEM3_SYNSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78196688|gb|ABB34453.1| porphobilinogen deaminase [Synechococcus sp. CC9605]
Length = 317
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + + A
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNQAYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE P+ E +KV+ H T ERAFL
Sbjct: 179 RLGFSDRIHQLIPGEISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G +A IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQTSGEASEAEAIGIALANTLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 GQGAGEIL 306
>gi|328871819|gb|EGG20189.1| porphobilinogen deaminase [Dictyostelium fasciculatum]
Length = 318
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 113/315 (35%), Positives = 163/315 (51%), Gaps = 10/315 (3%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M KK IG+R S LAL L ++H +N + L T GDR+ N L++IG
Sbjct: 1 MSDKKTVYIGSRKSQLALVQTHHVIDRLKELHGS-KYNFELKTLDTVGDRVLNVALSKIG 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--- 116
KGLFT+E+E +ISG+ID AVHS KD+PTK +GL + A RE+ D FI + ++
Sbjct: 60 DKGLFTKELEDLMISGDIDIAVHSLKDIPTKFPEGLGLGAITKRENCLDAFIVNASKHRP 119
Query: 117 --SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAY 173
+L +L ++IG+SSLRR + L R + D RG + TR KL + + ++LA
Sbjct: 120 TCTLAELPEGAIIGSSSLRRVSQLKRAYPHLQFKDIRGNLNTRFEKLEKSGEYDGMILAV 179
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG++RL I EI+ + GQGA+ IE N+P L++ +N +DT E
Sbjct: 180 AGLERLGWTDRITEIIQPTVSLYAVGQGALGIECRSNDPLIMSLLEPLNDKDTASCCIAE 239
Query: 234 RAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
RA L+EL+G C I + + GIVL DG +S G +GR+
Sbjct: 240 RAMLSELEGGCHVPIGVISSIDVERQLITLEGIVLNLDGSRAIRLSHTGPLASCHQVGRE 299
Query: 292 AAQYIRFISNKNVFN 306
AQ + K + N
Sbjct: 300 LAQQLIEKGAKEILN 314
>gi|126463094|ref|YP_001044208.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029]
gi|126104758|gb|ABN77436.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029]
Length = 322
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 19 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 79 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V
Sbjct: 139 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC
Sbjct: 199 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 259 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGVELASELLGRAPADF 318
Query: 305 FNF 307
F++
Sbjct: 319 FSW 321
>gi|217964297|ref|YP_002349975.1| porphobilinogen deaminase [Listeria monocytogenes HCC23]
gi|290893957|ref|ZP_06556933.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071]
gi|254800254|sp|B8DHJ2|HEM3_LISMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|217333567|gb|ACK39361.1| porphobilinogen deaminase [Listeria monocytogenes HCC23]
gi|290556495|gb|EFD90033.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071]
gi|307571137|emb|CAR84316.1| hemC [Listeria monocytogenes L99]
Length = 309
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 114/307 (37%), Positives = 168/307 (54%), Gaps = 7/307 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L
Sbjct: 60 LFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVNALDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 HGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA ++F G+V +DG I E + G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG--ANPSEIGNKVAEDLLSK 297
Query: 300 SNKNVFN 306
+
Sbjct: 298 GADTIIQ 304
>gi|241206704|ref|YP_002977800.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860594|gb|ACS58261.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 309
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 164/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D
Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGLVETRLRKLEQGEVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARVDDLLAPVNDGPTFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|317154529|ref|YP_004122577.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2]
gi|316944780|gb|ADU63831.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2]
Length = 310
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A + L H P + ++ + TKGD+I + L ++GGKGL
Sbjct: 2 KQLTIATRGSALALWQANHIKDRLEAEH--PGLTVHLLKIKTKGDKILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G AVHS KD+PT+L +GL++ RE D +S + L L
Sbjct: 60 FVKEIEEALLDGRAQLAVHSMKDVPTELPEGLEVGVIPEREASTDSLLSVKYEGLAGLPR 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR++ L R D+ + RG ++TR+ KL + AI++A AG+ RL+
Sbjct: 120 GAVVGTSSLRRQSQLATLRPDLKIESLRGNLDTRVRKLLAGEFDAIVVATAGLNRLELTA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
EIL DF P+ QGA+ IE H N + +++ +NHE + V ER FL LDG
Sbjct: 180 PKHEILGPPDFLPAVAQGALGIEYHSANAEVAAMLQFLNHEPSKRQVLAERGFLTGLDGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA ++ G L G V DG ++ G +A +IG A+ + K
Sbjct: 240 CQVPIAAWSVIDGERLRLTGFVADVDGSRPIRMTAEGPVDNAWDIGAALAEKVLAAGGKA 299
Query: 304 VFN 306
+ +
Sbjct: 300 ILD 302
>gi|62259213|gb|AAX77846.1| unknown protein [synthetic construct]
Length = 335
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 169/306 (55%), Gaps = 5/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+E K I +R S LAL ++ + IP I + T+GD I ++ L +IGG
Sbjct: 25 LEMKQITIASRESKLALWQTNFVKNRIQLELNIP---CEISTMKTQGDIILDQPLNKIGG 81
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ D
Sbjct: 82 KALFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDD 141
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+
Sbjct: 142 LPKGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLE 201
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL
Sbjct: 202 LVERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQEL 261
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 262 KGGCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALG 319
Query: 301 NKNVFN 306
+
Sbjct: 320 AYKILE 325
>gi|88813066|ref|ZP_01128308.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231]
gi|88789699|gb|EAR20824.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231]
Length = 309
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLAL A + L + P + ++ ++T+GDRI + L IGG
Sbjct: 1 MSRRRLRIATRKSPLALWQAEHVAAELRR--RYPELEVELVAMTTRGDRILDTPLARIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +E+E+ + G D AVHS KD+P +L +G+ + L RED D F+++ Q L
Sbjct: 59 KALFVKELERGIWEGRADIAVHSIKDVPAELPEGMHLPVVLEREDPCDAFVANLYQDLAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GT+SLRR+ L R D+ V RG ++TRL KL + K AI+LA AG++RL
Sbjct: 119 LPIGARVGTASLRRECQLRAQRPDLRVGTLRGNVQTRLAKLESGKFDAIVLAAAGLRRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IE ++ + EL+ + H ++ + ERA A L
Sbjct: 179 LAERIRCTLTPEQSLPAVGQGALGIECRSDDREINELIAPLTHSPSYLRITAERAVNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+GSC+ IA FA GS ++ +V + DG G +++G A+ +
Sbjct: 239 EGSCQVPIAAFAVLDGSNIWLRALVGSRDGSCVLRGEIRGPAGTGVSLGGQLAEDLLSRG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAELL 303
>gi|297617596|ref|YP_003702755.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680]
gi|297145433|gb|ADI02190.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680]
Length = 316
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 120/302 (39%), Positives = 173/302 (57%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A L D P H I + TKGD+IT+ L++IG KGLF
Sbjct: 10 KVRIGTRGSRLALWQANYVVKRLRDC--FPGHEFEITVIKTKGDKITDVALSKIGDKGLF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE L+ EID AVHS KD+PT L +G++++A L RE+ DV +S SL L
Sbjct: 68 TKEIEMALLREEIDIAVHSLKDLPTTLPEGIRLAAVLERENPLDVLLSFKGYSLSGLPRG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSSLRR A L R R DI ++ RG +ETR+ K+ + I+LAYAG+KR+ +
Sbjct: 128 ARIGTSSLRRTAQLKRLRPDIETVNLRGNVETRIRKMEDEGLDGIVLAYAGVKRMGFLHL 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ EIL+ + P+ GQG I +E + A+ELVK +NH+ TW + ERAFL ++G C
Sbjct: 188 VTEILHPDQVIPAVGQGVIALEIKEDGKVAEELVKPLNHQPTWAEITAERAFLKAIEGGC 247
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ A + L G+V + DG++ + +G+ A +G + A+ I + ++
Sbjct: 248 QVPCGCHASYQEGYLTVDGLVASLDGQVVYRDRVSGSEAFAQQLGEELARRILAMGGGSL 307
Query: 305 FN 306
Sbjct: 308 LE 309
>gi|281203457|gb|EFA77657.1| porphobilinogen deaminase [Polysphondylium pallidum PN500]
Length = 324
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 108/311 (34%), Positives = 156/311 (50%), Gaps = 9/311 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ IG+R S LA+ SL ++H P I + T GDR+ N L++IG K
Sbjct: 6 NRDTIIIGSRKSQLAMVQTESVMKSLQELH--PNLKFEIKTMDTVGDRVLNVALSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH----TAQS 117
GLFT+E+E ++SG ID AVHS KD+PTK +GL + A RE+ D FI+H
Sbjct: 64 GLFTKELEDLMLSGHIDIAVHSLKDLPTKFPEGLSLGAITKRENCFDAFIAHPKYGKDAR 123
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGI 176
L + +VIG+SSLRR + L R + D RG + TR NKL + + ++LA AG+
Sbjct: 124 LSSMPEGAVIGSSSLRRVSQLKRAYPQLQFKDIRGNLNTRFNKLETSGEYDGMILAVAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+RL I E+L E + GQGA+ IE ++ Q L+ +NH +T ERA
Sbjct: 184 ERLGWTDRITEVLQPEVSLYAVGQGALGIECRSDDEFVQSLLAPLNHYETAQCCAAERAM 243
Query: 237 LAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L EL+G C I + S L G+VL+ DG +S G +G+ A
Sbjct: 244 LRELEGGCHVPIGVNTTLEQNNSILSIEGVVLSLDGTKSIRLSHRGEIDQPEIVGKQLAL 303
Query: 295 YIRFISNKNVF 305
++ +
Sbjct: 304 MLKEKGATEIL 314
>gi|124025263|ref|YP_001014379.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A]
gi|158512743|sp|A2C0V4|HEM3_PROM1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123960331|gb|ABM75114.1| Porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A]
Length = 315
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQRAH--PDLAITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPEGLILGCITEREDPSDALVVNEKNQIHK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE K +++K + HE T ER+FL
Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK + G+ A IG D A ++
Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 GRGAGEILE 307
>gi|13473577|ref|NP_105145.1| porphobilinogen deaminase [Mesorhizobium loti MAFF303099]
gi|23821698|sp|Q98EI7|HEM3_RHILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|14024327|dbj|BAB50931.1| hydroxymethylbilane synthase [Mesorhizobium loti MAFF303099]
Length = 308
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 142/304 (46%), Positives = 205/304 (67%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKG
Sbjct: 2 QTTLKIGTRGSPLALAQAHETQARLMAAHGLPAEAFEVVVISTSGDRIQDRPLSEAGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ DL
Sbjct: 62 LFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIADLL 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL E
Sbjct: 122 RGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLE 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA LDG
Sbjct: 182 HVATDLMPLDIFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A + L F G++++ DG H V G DA IG +AA+ +R + +
Sbjct: 242 SCRTPIAGHATIETGNLSFAGLIISPDGTQSHTVELQGPAQDAARIGDEAARTVRAKAGE 301
Query: 303 NVFN 306
F+
Sbjct: 302 KFFD 305
>gi|15615608|ref|NP_243912.1| porphobilinogen deaminase [Bacillus halodurans C-125]
gi|11386834|sp|Q9K8G0|HEM3_BACHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|10175668|dbj|BAB06765.1| porphobilinogen deaminase [Bacillus halodurans C-125]
Length = 311
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IG+R S LAL S L + P + I + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIIGSRRSQLALTQTEWVISKLKEAGA--PFDFEIKKIITKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ + + EID AVHS KD+P+ L +G + A R D RD IS+ +L +L
Sbjct: 60 FVKEIEQAMANKEIDIAVHSMKDVPSVLQEGFALGATTTRVDPRDALISNEGYTLAELPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
S++GTSSLRR A +L R D+ V RG IETRL KL AI+LA AG++R+
Sbjct: 120 GSIVGTSSLRRSAQILAKRPDLEVKWIRGNIETRLRKLKEEDFDAIILAAAGLERMGWSN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+++ E L+ + P+ GQGA+ IE ++ + E++K IN + T +V ER FL ++G
Sbjct: 180 EIVTEYLDPDLCVPAVGQGALGIECRADDDEVLEMLKTINDDTTAKTVLAERTFLHRMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + +V DG+ + G D + +G AQ +
Sbjct: 240 GCQVPIAGYATLTDEGEIELTALVGTPDGEQIFKEILRGK--DPVQLGETMAQALMDQGA 297
Query: 302 KNVFN 306
K V
Sbjct: 298 KEVLE 302
>gi|327439433|dbj|BAK15798.1| porphobilinogen deaminase [Solibacillus silvestris StLB046]
Length = 310
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 113/299 (37%), Positives = 168/299 (56%), Gaps = 5/299 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L + P + + + TKGDRI + L+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFINELKEAGV--PFDFEVKEIVTKGDRILDVQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS+ DL
Sbjct: 60 FVKEIEQALYDKEIDFAVHSMKDMPAVLPEGLIIGCIPPREDARDAFISNGHVKFADLPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A LL+ R D+ + RG ++TRL KL AI+LA AG+KRL +
Sbjct: 120 GAIVGTSSLRRSAQLLQARPDLEIKWIRGNVDTRLKKLETEDFDAIILAAAGLKRLGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+V+ E L+ + P+ QG++ IE ++ + E + + TW + + ER+FLA +DG
Sbjct: 180 EVVTEYLDTDICLPAVAQGSLGIECRADDTELLEQLTKLTDATTWATAHAERSFLAAMDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A +G T+ G+V A D + ++ + G DA +G+ A +
Sbjct: 240 GCQVPIAGYATVEGDTITLTGLVAAPDASVTYKETLTGT--DADAVGKAVAAKLTEQGA 296
>gi|110635531|ref|YP_675739.1| porphobilinogen deaminase [Mesorhizobium sp. BNC1]
gi|110286515|gb|ABG64574.1| hydroxymethylbilane synthase [Chelativorans sp. BNC1]
Length = 309
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 153/306 (50%), Positives = 203/306 (66%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ +IGTR S LALA A ETR+ LM H +P I+ + T GDRI +R L+E GG
Sbjct: 1 MQTDVIKIGTRGSALALAQAAETRARLMVAHGLPEDAFEIVVIRTSGDRIQDRPLSEAGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+ G ID AVHS+KDMPT L GL++SA+L RED+RDVFI A+ L+D
Sbjct: 61 KGLFTKEIEEALLEGRIDLAVHSSKDMPTFLPDGLELSAFLEREDVRDVFIGRAAKRLED 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+AL LR R D+ V FRG ++TRL KL + A LLA AG+KRLK
Sbjct: 121 LPHGANLGTSSLRRQALALRLRPDLKVGVFRGNVQTRLRKLEDGAADGTLLALAGLKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V E+++ FPP+ GQGAICIE+ + + +LV+ I+H T +++CERAFLA L
Sbjct: 181 LEHVATELMDPVIFPPALGQGAICIESRTGDTRIAKLVEAIHHPATGFALSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ +AG A G + F G++L DG+ HE+ +G DA IGRDA + IR +
Sbjct: 241 DGSCRTPMAGLATVDGDRIAFSGMILTPDGREVHEIGGDGAAQDAAEIGRDAGRRIRQKA 300
Query: 301 NKNVFN 306
F
Sbjct: 301 GAGFFE 306
>gi|253575681|ref|ZP_04853017.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845019|gb|EES73031.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 320
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 113/318 (35%), Positives = 161/318 (50%), Gaps = 14/318 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV--HKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M K+ +GTR S LAL + L + P + I + TKGDRI + TL+++
Sbjct: 1 MTKRTIVVGTRQSQLALTQTGQVIDDLKAICREHHLPFDFEIRKIVTKGDRILDVTLSKV 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +EIE+ +++GEID AVHS KDMP+ L GL A R D RD IS +SL
Sbjct: 61 GGKGLFVKEIEQAMLNGEIDLAVHSMKDMPSVLPDGLMNGAVPRRVDPRDALISRNGRSL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L + +GTSSLRR + L +R D + RG I++RL KL AI+LA AG+ R
Sbjct: 121 DELPQGAKVGTSSLRRASQLRAYRPDFVLEPIRGNIDSRLRKLEEEGFDAIILAAAGLFR 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E I L E P+ GQGA+ IE ++ + + L+ + N DT +V ER FL
Sbjct: 181 MGWEHRITAFLPAEVCLPAVGQGALGIECREDDDEVRRLLSLYNDPDTAVTVAAERRFLG 240
Query: 239 ELDGSCKSAIAGFAYCKGST----------LYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
L+G C+ I +A L G+V ++DG + S G D +
Sbjct: 241 VLNGGCQVPIGAYATLLPEEGASGETGRPRLRLTGMVGSADGTTILKESAEGT--DPTEL 298
Query: 289 GRDAAQYIRFISNKNVFN 306
G A + + +
Sbjct: 299 GEQLAGRLISMGAAALLQ 316
>gi|258514534|ref|YP_003190756.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771]
gi|257778239|gb|ACV62133.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771]
Length = 309
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LAL A L + + P ++ I + T GD I + L +IG KGL
Sbjct: 2 REIVVGTRDSQLALWQANWVVDRLRE--RNPGYSFRIQGIKTHGDNILDVALAKIGDKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E L+S EID AVHS KD+PT L GL + A RE DV +S L L
Sbjct: 60 FTKELEVALLSDEIDLAVHSMKDLPTDLPGGLAVGAVCEREYPGDVLVSSQGYVLDKLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+VIGTSSLRR A LL +R D+ +++ RG + TRL K++ K ++LAYAGI+RL +
Sbjct: 120 GAVIGTSSLRRTAQLLHYRQDLRIVNIRGNLNTRLRKMDEEKLDGVVLAYAGIQRLGLKD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E + +E P+ GQG+I IE + + ++V+ I H + +V+ ER FL L+G
Sbjct: 180 RITERIPMEICLPAVGQGSIGIEIRHLDEEIMDIVETIEHRPSRIAVSAERNFLKRLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I + G+ + F G++ + DGK G +A IG A+ + +
Sbjct: 240 CQVPIGAYGLVIGNEIKFEGLIASLDGKHLVRDVIAGPVNEAAKIGVKLAESLLKKGGRE 299
Query: 304 VF 305
+
Sbjct: 300 IL 301
>gi|255558669|ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis]
gi|223540457|gb|EEF42025.1| porphobilinogen deaminase, putative [Ricinus communis]
Length = 372
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 141/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I + L +IGGKGL
Sbjct: 65 IRIGTRGSPLALAQAHETRDKLMAKHSELAEEGAIQIVIIKTTGDKILTQPLADIGGKGL 124
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+GEID AVHS KD+PT L + + LPRED+RD FIS +A SL +L
Sbjct: 125 FTKEIDEALINGEIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSASSLAELPS 184
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ +L +SV++ FRG ++TRL KLN A LLA AG+KRL
Sbjct: 185 GSVIGTASLRRKSQILHRYPSLSVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 244
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L+I+D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG
Sbjct: 245 ENVTSVLSIDDMLPAVAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDG 304
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 305 SCRTPIAGYASKDENGDCIFKGLVASPDGTRVLETSRKGPYALDDMIMMGKDAGKELLLQ 364
Query: 300 SNKNVFN 306
+ F+
Sbjct: 365 AGPGFFD 371
>gi|325129681|gb|EGC52495.1| porphobilinogen deaminase [Neisseria meningitidis OX99.30304]
gi|325203630|gb|ADY99083.1| porphobilinogen deaminase [Neisseria meningitidis M01-240355]
Length = 311
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 103/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|118496750|ref|YP_897800.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. novicida U112]
gi|194324057|ref|ZP_03057832.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida
FTE]
gi|208779979|ref|ZP_03247322.1| porphobilinogen deaminase [Francisella novicida FTG]
gi|158512415|sp|A0Q481|HEM3_FRATN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118422656|gb|ABK89046.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella novicida U112]
gi|194321954|gb|EDX19437.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida
FTE]
gi|208743983|gb|EDZ90284.1| porphobilinogen deaminase [Francisella novicida FTG]
Length = 300
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|89894971|ref|YP_518458.1| hypothetical protein DSY2225 [Desulfitobacterium hafniense Y51]
gi|219669373|ref|YP_002459808.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2]
gi|123091755|sp|Q24VC8|HEM3_DESHY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800248|sp|B8G2M2|HEM3_DESHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89334419|dbj|BAE84014.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539633|gb|ACL21372.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2]
Length = 308
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 122/301 (40%), Positives = 174/301 (57%), Gaps = 4/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL A + L + + P V++P+ TKGD+I + L +IG KGLFT
Sbjct: 4 VKIGTRDSQLALWQAEWVKRKLEEYY--PEREFVLVPMKTKGDKILDVPLAKIGDKGLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L++GEIDCAVHS KD+PT L GL+I+A+ RE+ RDVF+S L L S
Sbjct: 62 KELEVGLLNGEIDCAVHSLKDLPTVLPPGLEIAAFCEREEPRDVFLSKDGTPLGSLPAGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSSLRRKA L +RSD+S D RG ++TR KL + I+LA AG+KRL E I
Sbjct: 122 IIGTSSLRRKAQLQNYRSDLSFADLRGNLQTRWRKLQESDMAGIVLAAAGVKRLGWEDRI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E + GQGAI +E +E++ ++NH DT +V ERA L L+G C+
Sbjct: 182 TEYISEEIMLSAVGQGAIAVEIAAQRADVREMLDLLNHGDTERAVKAERALLYRLEGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +A + + G+V + DG+ +V+ +G +GR AA + +
Sbjct: 242 IPIGAWAVTEQQQIVLKGMVASLDGQRILKVTLSG--EHPEELGRQAADLLIAQGALEIL 299
Query: 306 N 306
Sbjct: 300 Q 300
>gi|261393090|emb|CAX50687.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS;
pre-uroporphyrinogen synthase) [Neisseria meningitidis
8013]
Length = 311
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|222151551|ref|YP_002560707.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus
JCSC5402]
gi|254800255|sp|B9E743|HEM3_MACCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222120676|dbj|BAH18011.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus
JCSC5402]
Length = 307
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 172/304 (56%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L H P I I + TKGD+I N L+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQSQQFIDQLKRKH--PNLEIEIKEIVTKGDQIVNVQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L G ID A+HS KD+P+ L +GL + RED RD +I+ L +L
Sbjct: 60 FVKEIEQALYDGTIDFAIHSLKDVPSVLPEGLTLGCIPVREDARDAYIAKHHIPLHELKP 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR A LL + + RG I+TRL KL + AI+LA AG+ R+ +K
Sbjct: 120 GSIVGTSSLRRGAQLLDQYPHLEIKWIRGNIDTRLAKLRDEDYDAIILAAAGLNRMGWDK 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ E LN E P+ GQGA+ IE ++ + L+K ++ E+T ER FL +DG
Sbjct: 180 SIVTEYLNPELMLPAIGQGALGIECRSDDAEVLALLKSVHDEETELCTEAERTFLRLMDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC+ IAG A G ++ F G++++ DGK ++V+ +G + I IG A+ + K
Sbjct: 240 SCQVPIAGHATMVGESIEFTGLIMSPDGKEKYKVTHSG--GNPIEIGTQVAKAMEQNGAK 297
Query: 303 NVFN 306
+
Sbjct: 298 AIIE 301
>gi|147677307|ref|YP_001211522.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI]
gi|189028095|sp|A5D3L5|HEM3_PELTS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146273404|dbj|BAF59153.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI]
Length = 312
Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 168/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +GTR S LA+ A L ++ P + I+ + T GDRI + L +IG KG
Sbjct: 2 KREIAVGTRVSKLAMWQARWVVDRLKEL--CPGCSFRIVGIRTLGDRILDAALVKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GEID AVHS KD+PT+L +GL I A RE DV +S + L +L
Sbjct: 60 LFTKELEAAMLRGEIDMAVHSMKDLPTELPEGLVIGAVCKREHPADVLVSRRGKKLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL +R D+ +++ RG I TRL KL A +LAYAG+ R+ ++
Sbjct: 120 GGALVGTSSLRRCAQLLWYRDDLRMVNLRGNINTRLRKLEEENLDAAVLAYAGLFRMGRQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +++ + P+ GQG+I +E ++ + ELVK I+H ++ +V ERAFL L+G
Sbjct: 180 DAITQVIPFDICLPAVGQGSIGVEVRSDDGEVLELVKKIDHRESRLAVFAERAFLRRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + + L G+V DGK GN DA IG A+ + +
Sbjct: 240 GCQVPVGALGTVENDRLRLEGVVATPDGKQLVRSFVEGNGGDAAAIGLRLAEKLLELGAG 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|146276603|ref|YP_001166762.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025]
gi|145554844|gb|ABP69457.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025]
Length = 322
Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats.
Identities = 130/303 (42%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 19 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+ G ID AVHS KDMPT +GL + YLPRED RD FI++ L DL
Sbjct: 79 TREIEEALLDGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITYAEGGLADLPQG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK + V
Sbjct: 139 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDDV 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE +++P+ QE++ I+ T + ER+FL +LDGSC
Sbjct: 199 PRVAIEPEEMLSAVAQGAIGIERRIDDPRTQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G ++ G +L DG G DA +G + A + + +
Sbjct: 259 ETPIAGLAVLEGDQIWLRGEILRPDGSESISGEIRGGIPDAAALGAELASELLGRAPSDF 318
Query: 305 FNF 307
F++
Sbjct: 319 FSW 321
>gi|328675303|gb|AEB27978.1| Porphobilinogen deaminase [Francisella cf. novicida 3523]
Length = 300
Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 169/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL + + IP I + T+GD I ++ L ++GGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKKYIQKELNIP---CEITTMKTQGDIILDKPLNKVGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + +G+ + AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMQNGKANIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL++ + AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLVIKDLRGNVQTRLSKLDSGEYDAIILASAGLIRLELNE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDRDVELLEKLQKLNCSTSFRMATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ A+ + +
Sbjct: 239 CHVAIGAYAELNNNQITLTAMVASSDGKKILKRKMIGD--DPTKVGKLLAREMIELGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|149204076|ref|ZP_01881044.1| porphobilinogen deaminase [Roseovarius sp. TM1035]
gi|149142518|gb|EDM30563.1| porphobilinogen deaminase [Roseovarius sp. TM1035]
Length = 315
Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 184/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEAFEIVVIKTTGDQIIDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ +++G+ID AVHS KDMP +GL + YLPRED+RD F+S T SL DL
Sbjct: 71 TREIEQAMLTGDIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPTVASLADLPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V
Sbjct: 131 SLVGTSSLRRKAQVLVAYPHLEVVEFRGNVQTRLKKLEDGVAACTFLAMAGLNRLGRSEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC
Sbjct: 191 ATCAIDADVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A GSTL G +L DG ++ D +GR A + +
Sbjct: 251 ETPIAGLAELNGSTLRLRGEILRPDGSESLTDDQSAPIEDGAELGRAMAAKLLAQAGPGF 310
Query: 305 FNF 307
F++
Sbjct: 311 FDW 313
>gi|89255577|ref|YP_512938.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
LVS]
gi|156501520|ref|YP_001427585.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167010342|ref|ZP_02275273.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FSC200]
gi|187932192|ref|YP_001892177.1| porphobilinogen deaminase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254368575|ref|ZP_04984591.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica FSC022]
gi|290954410|ref|ZP_06559031.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
URFT1]
gi|295312152|ref|ZP_06802958.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
URFT1]
gi|123401648|sp|Q2A5R3|HEM3_FRATH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217773|sp|A7N9H6|HEM3_FRATF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058914|sp|B2SE34|HEM3_FRATM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89143408|emb|CAJ78581.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica LVS]
gi|156252123|gb|ABU60629.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121478|gb|EDO65669.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica FSC022]
gi|187713101|gb|ACD31398.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 300
Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|308070414|ref|YP_003872019.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681]
gi|305859693|gb|ADM71481.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681]
Length = 308
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 4/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMD--VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +G+R S LAL L + V+ + TKGDRI + TL+++GGK
Sbjct: 2 RTIVVGSRQSALALTQTGHVIEDLNALCAEQGMDLQFVVKKILTKGDRILDVTLSKVGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+DL
Sbjct: 62 GLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPHREDPRDCLITLGAKSLEDL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+
Sbjct: 122 PQGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ I + D P+ GQGA+ IE ++ + L+++ N DT +V ER FL L+
Sbjct: 182 KERITSYIPEADCLPAVGQGALGIECRASDEELLALLRLYNDRDTSATVAAERTFLGVLN 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A G + G+V + DG++ + + GN D +G A +
Sbjct: 242 GGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGN--DPQKLGEAVAASLIAKGA 299
Query: 302 KNVF 305
+ +
Sbjct: 300 EQIL 303
>gi|255658552|ref|ZP_05403961.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544]
gi|260849356|gb|EEX69363.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544]
Length = 315
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ IGTR S LAL A L + P + ++TKGD+I + L +IGG
Sbjct: 1 MKNDTIVIGTRSSKLALWQADYVADCLRK--RYPELRVEKKLMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G ID AVHS KDMPT++ +GL ISA R D D +S ++L++
Sbjct: 59 KGLFTKELEQDMLAGGIDIAVHSLKDMPTEVPEGLVISAITERFDPGDAVVSPKYRTLEN 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRKA LL R D+ + D RG + TRL KL AI+LA AG+KRL
Sbjct: 119 LPQGAKVGTSSLRRKAQLLHARPDLQISDLRGNVNTRLEKLEREHFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L E P+ GQGA+ IET N+ + + L+ +N E T ERAFLA +
Sbjct: 179 FADRITEVLPREMVLPAVGQGALAIETRENDREVRNLIAFLNDEATVACARAERAFLARV 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A + L+ ++ + DG + + G+ +A ++G A + +
Sbjct: 239 EGGCQVPVGVYAVPEAEGRLHVEAVIASLDGARLYRDAAVGSAAEAESLGTALADKLLAM 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GGIAIL 304
>gi|222150055|ref|YP_002551012.1| porphobilinogen deaminase [Agrobacterium vitis S4]
gi|221737037|gb|ACM38000.1| porphobilinogen deaminase [Agrobacterium vitis S4]
Length = 309
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 164/306 (53%), Positives = 212/306 (69%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A ETR L H + P I+ LST GDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHETRERLATAHGLSPDMFEIVVLSTTGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT E+E++L+SG +D AVHS+KDMPT L GL+ISAYLPRED+RD FI TA L +
Sbjct: 61 KGLFTLELEQQLLSGGLDFAVHSSKDMPTALPDGLEISAYLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +VIG++SLRR+AL+ R R D+ VI +RG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LAEGAVIGSASLRRQALIRRLRPDLQVITYRGAVETRLRKLAAGEVDATLLAVAGLKRLD 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KE VI + L++E FPP+P QGAICIE V++ + Q+L+ INH T+D+V+CERAFLA L
Sbjct: 181 KETVITQYLDLESFPPAPAQGAICIEARVDDRRIQDLLAPINHRPTFDAVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G + G +L DG++ H V G D + +G A + +R +
Sbjct: 241 DGSCRTPIAGYAISDGEMIRLTGTILTPDGQVSHSVEAEGRCADGLALGWSAGEKVRDKA 300
Query: 301 NKNVFN 306
F
Sbjct: 301 GPGFFE 306
>gi|313623622|gb|EFR93785.1| porphobilinogen deaminase [Listeria innocua FSL J1-023]
Length = 309
Score = 364 bits (936), Expect = 6e-99, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 165/306 (53%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL
Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E ++ E P+ GQGA+ IE + + ++ I+HE+T V ER FL +
Sbjct: 180 ENPSLKLEDISPELCLPAVGQGALAIECRETDLQICNMLASIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA G +++F G+V +DG I E R G IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG--ASPAEIGNQVAEELLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|307103191|gb|EFN51453.1| hypothetical protein CHLNCDRAFT_33052 [Chlorella variabilis]
Length = 361
Score = 364 bits (936), Expect = 6e-99, Method: Composition-based stats.
Identities = 131/312 (41%), Positives = 189/312 (60%), Gaps = 6/312 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIG 59
K +IGTR SPLALA A+ TR L + II + T GD+I N+ L++IG
Sbjct: 50 ATKTLKIGTRGSPLALAQAYLTRDLLKSTFPELNEEGALEIIIIKTTGDKILNQPLSDIG 109
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+EI+ L+ G ID AVHS KD+PT L G + LPRED+RDVFIS +S+
Sbjct: 110 GKGLFTKEIDDALLDGRIDIAVHSMKDVPTYLPAGTVLPCNLPREDVRDVFISAKYKSIA 169
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+G++SLRR+A +L + V++FRG ++TRL KL A LLA AG+KRL
Sbjct: 170 ELPEGAVVGSASLRRQAQILAKYPTLQVVNFRGNVQTRLRKLQEGACDATLLALAGLKRL 229
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
IL+ ++ P+ QGAI I + ++ + +NHE+T ++ CERAFLA
Sbjct: 230 GLADKATSILSTDEMLPAVAQGAIGIACREGDDRSAAALAALNHEETRLAIVCERAFLAA 289
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIR 297
LDGSC++ IAG+A+ L F G+V DGK +E +R G+ +A IG+DA ++
Sbjct: 290 LDGSCRTPIAGWAHKADGQLAFRGLVSTPDGKKMYETTRTGSLTEDEARAIGQDAGTELK 349
Query: 298 FISNKN--VFNF 307
+ ++ VF++
Sbjct: 350 QQAQQDGTVFDW 361
>gi|325294749|ref|YP_004281263.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065197|gb|ADY73204.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 311
Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 174/306 (56%), Gaps = 6/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL + + + K P + +I ++TKGD+I + L +IG KGLF
Sbjct: 2 KIRIGTRKSKLALWQSEWVKEQIEK--KFPEVEVELIKITTKGDKILDVPLAKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE ++ GE+D AVHS KD+P+KL +GL++ A+ RED RD +S +L L
Sbjct: 60 TKEIEDAMLKGEVDIAVHSLKDVPSKLPEGLKLIAFSDREDPRDALLSCGKYTLDTLPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E
Sbjct: 120 AVVGTSSLRRKAQLRILRPDLEIRDLRGNVDTRIRKLKEEQYDAIILAAAGVKRLGWENE 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243
I EIL+ + PS QG + IE ++P+ + +VK IN ++ + ERAFL ++G
Sbjct: 180 IDEILSSDKMIPSVSQGILGIEGREDDPEIERIVKEAINSRESEIAATVERAFLRTVEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300
C+ + +A + ++ + +G+ +++ + N +A +G A+ +
Sbjct: 240 CQVPLGCYAVVVENRVHVRAFISDLNGRFYYKEEGVFKVENLEEADMVGTGVAERLLSAG 299
Query: 301 NKNVFN 306
K + +
Sbjct: 300 GKKILD 305
>gi|226942049|ref|YP_002797123.1| porphobilinogen deaminase [Laribacter hongkongensis HLHK9]
gi|254800253|sp|C1D679|HEM3_LARHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226716976|gb|ACO76114.1| Hem3 [Laribacter hongkongensis HLHK9]
Length = 308
Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 160/303 (52%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R SPLA+ A R+ L ++ P + I+ ++T+GDRI ++TL +IGGKGL
Sbjct: 2 KQVVIASRESPLAMWQAEHIRARLQALY--PGLEVSILGITTQGDRILDKTLNKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + G+ D AVHS KD+P L +G ++A RED RD F+S SL +L
Sbjct: 60 FVKELELAMQEGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR++ + + V RG ++TRL KL+ + AI+LA +G+KR+ +
Sbjct: 120 GAVVGTASLRRESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L+ D P+ GQGA+ IE + L+ +NH T+ V ERA L S
Sbjct: 180 RIRMELSTADSLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGAS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + G+A L G V DG A +GR A+ + +
Sbjct: 240 CQIPVGGYAEQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALGRTIAKKLLDQGADD 299
Query: 304 VFN 306
V +
Sbjct: 300 VID 302
>gi|323699104|ref|ZP_08111016.1| porphobilinogen deaminase [Desulfovibrio sp. ND132]
gi|323459036|gb|EGB14901.1| porphobilinogen deaminase [Desulfovibrio desulfuricans ND132]
Length = 310
Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A + L H P ++ ++ + TKGD+I + L ++GGKGL
Sbjct: 2 KKLTIATRGSALALWQANHIKDRLEAEH--PGLSVDLLKIKTKGDKILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G AVHS KD+PT+L GL++ RE+ D +S L L
Sbjct: 60 FVKEIEEALLDGRAQLAVHSMKDVPTELPDGLEVGIIPEREEATDSLLSVKYDGLAGLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR++ L R D+ + RG ++TRLNKL N + AI+LA AG+KRL
Sbjct: 120 GAVVGTSSLRRQSQLCALRPDLKIETLRGNLDTRLNKLLNGEYDAIVLATAGLKRLAMSA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+EIL+ +F P+ QGA+ IE + + ++L+ ++H T V ER FL LDG
Sbjct: 180 PKQEILSPPEFLPAVAQGALGIEFRSADTEVRDLLAFLDHAPTKHQVLAERGFLTGLDGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA ++ +G TL G V DG GN A ++G A + K
Sbjct: 240 CQVPIAAWSVIEGETLRLTGYVAEVDGSTPIRRMVEGNVAHAWDLGMILAGQVLEAGGKA 299
Query: 304 VFN 306
+ +
Sbjct: 300 ILD 302
>gi|72383664|ref|YP_293019.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL2A]
gi|123773715|sp|Q46GS7|HEM3_PROMT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72003514|gb|AAZ59316.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. NATL2A]
Length = 315
Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQREH--PDLVITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G + AVHS KD+PT L GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPDGLILGCITKREDPSDALVVNEKNQIHK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE K +++K + HE T ER+FL
Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK + G+ A IG D A ++
Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 GRGAGEILE 307
>gi|255640018|gb|ACU20300.1| unknown [Glycine max]
Length = 356
Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 142/306 (46%), Positives = 187/306 (61%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL
Sbjct: 49 IRIGTRGSPLALAQAYETRDKLMASHPDLAEEGAIEIVIIKTTGDKILTQPLADIGGKGL 108
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ L++ EID AVHS KD+PT L + LPRED+RD FIS TA SL DL
Sbjct: 109 FTKEIDEALLNSEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLADLPP 168
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ +L ++V +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 169 ASVIGTASLRRKSQILHRYPSLNVQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMT 228
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I ++ K E + +NHE+T +V CERAFL LDG
Sbjct: 229 ENVTSILSIDDMLPAVAQGAIGIACRSDDDKMAEYIDSLNHEETRLAVVCERAFLQTLDG 288
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 289 SCRTPIAGYACRNEDGNCLFRGLVASPDGTRVLETSRVGPYAVEDMIEMGKDAGKELLSR 348
Query: 300 SNKNVF 305
+ N F
Sbjct: 349 AGPNFF 354
>gi|149199469|ref|ZP_01876504.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa
HTCC2155]
gi|149137404|gb|EDM25822.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa
HTCC2155]
Length = 307
Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 112/301 (37%), Positives = 167/301 (55%), Gaps = 3/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LAL A +S L++V P I + + T+GD+I + +L +IGGKGLF
Sbjct: 2 KLRIATRGSQLALWQAEHVKSRLLEV--DPSLEIELKIIKTQGDKILDVSLAKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ ++ E D AVHS KD+P +L +GL + A L RED RD F+S+ +SL +L
Sbjct: 60 VKEIEQAMMDDEADLAVHSMKDVPAELPEGLILQAILEREDPRDAFVSNKYKSLDELPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR + L R + RG + TRL KL+++K AI+LA AG+ RL+
Sbjct: 120 AVVGTSSLRRASQLYRQYP-VKTELLRGNVNTRLAKLDDDKYDAIILAAAGLIRLEFGDR 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + L+ + F PSPGQGA+ IE ++ + L+ +NH +T V ER F + GSC
Sbjct: 179 IADSLDPDKFIPSPGQGAVGIECREDDAELCALLNKLNHTETSIRVKVEREFNLAIGGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A G + V + DGK ++ +G+ D G + A + +
Sbjct: 239 QVPAGCYATIDGDSFELRAFVASPDGKEYYREDMSGDLKDLPGKGTEIANKLIARGAAEI 298
Query: 305 F 305
Sbjct: 299 I 299
>gi|124022436|ref|YP_001016743.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303]
gi|158512753|sp|A2C7L8|HEM3_PROM3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123962722|gb|ABM77478.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303]
Length = 317
Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG
Sbjct: 1 MVLTQLRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LDTLPEGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE +P+ E++K + H+ T ERA L
Sbjct: 179 RLGFGDRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEVIKALEHKPTAQRCLAERALL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + + L G+V + DGK + G IG++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEAIGKELAETLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 SQGAGEIL 306
>gi|328676207|gb|AEB27077.1| Porphobilinogen deaminase [Francisella cf. novicida Fx1]
Length = 300
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|330804637|ref|XP_003290299.1| porphobilinogen deaminase [Dictyostelium purpureum]
gi|325079586|gb|EGC33179.1| porphobilinogen deaminase [Dictyostelium purpureum]
Length = 319
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 100/314 (31%), Positives = 166/314 (52%), Gaps = 11/314 (3%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++ IG+R S LA+ R L +++ P + I + T GD++ + +L++IG
Sbjct: 1 MSERNTVYIGSRKSQLAMLQTEWVRDRLQELN--PNIKVEIKTMDTTGDKVLDVSLSKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-----T 114
KGLFT+E+E +++G +D AVHS KD+PT+L GL++ A R D FI++
Sbjct: 59 DKGLFTKELEDMMLNGSVDLAVHSLKDIPTRLPDGLKLGAITKRYSTSDAFIANVKKHGK 118
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172
L DL ++IG+SSLRR A L + + D RG + TR NKL+ +++ ++LA
Sbjct: 119 DCKLSDLPNGALIGSSSLRRVAQLKKSYPHLQFKDIRGNLNTRFNKLDAVDSEYDGMILA 178
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG++R+ I +++ E + GQGA+ IE N+P +++++ +NH ++
Sbjct: 179 VAGLERMNLTDRISQVIPDEISLYAVGQGALGIECKENDPFIEKILEPLNHSESMMRCKA 238
Query: 233 ERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
ER+ L EL+G C I + + L GIVL DG + E G +G+D
Sbjct: 239 ERSMLRELEGGCHVPIGVVTKINQNNILEIKGIVLNLDGSKYIESYIEGPVEQYEQLGKD 298
Query: 292 AAQYIRFISNKNVF 305
A + +K +
Sbjct: 299 IAADLIKKGSKEIL 312
>gi|291044525|ref|ZP_06570234.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|293397661|ref|ZP_06641867.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62]
gi|291011419|gb|EFE03415.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|291611607|gb|EFF40676.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62]
Length = 313
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 300
Query: 301 NKNVFN 306
+ +
Sbjct: 301 AQELIG 306
>gi|33863541|ref|NP_895101.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313]
gi|39931399|sp|Q7V697|HEM3_PROMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33640990|emb|CAE21448.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313]
Length = 317
Score = 364 bits (935), Expect = 8e-99, Method: Composition-based stats.
Identities = 99/308 (32%), Positives = 154/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG
Sbjct: 1 MVLTQLRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LDTLPEGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE +P+ E +K + H+ T ERA L
Sbjct: 179 RLGFGDRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEAIKALEHKPTAQRCLAERALL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + + L G+V + DGK + G IG++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEAIGKELAETLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 SQGAGEIL 306
>gi|315282478|ref|ZP_07870883.1| porphobilinogen deaminase [Listeria marthii FSL S4-120]
gi|313613876|gb|EFR87615.1| porphobilinogen deaminase [Listeria marthii FSL S4-120]
Length = 309
Score = 364 bits (935), Expect = 8e-99, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 170/306 (55%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDKAIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVSSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFIIKPIRGNIDTRLQKLHAENFDAIILAKAGLSRMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ + ++++ ++HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIPAELCLPAVGQGALAIECRESDQQIRDMLASVHHEETGVCVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA G ++F G+V +DG + E + G + +IG A+ +
Sbjct: 240 LNGGCEIPIAGFAAKTGDVIHFKGLVGNADGSVILESEQTGT--NPSDIGNQVAEDLLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|254671436|emb|CBA08950.1| Porphobilinogen deaminase [Neisseria meningitidis alpha153]
Length = 311
Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|224499785|ref|ZP_03668134.1| porphobilinogen deaminase [Listeria monocytogenes Finland 1988]
Length = 309
Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA + F G+V +DG I E + G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATRANEVVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|224476761|ref|YP_002634367.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254800259|sp|B9DNE1|HEM3_STACT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222421368|emb|CAL28182.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 308
Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 176/305 (57%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSRQFIERLKKVE--PDLDIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+++L EID A+HS KD+P++L GL + RE D FIS L DL
Sbjct: 60 FVKEIQQELFDHEIDMAIHSLKDVPSELPDGLTLGCIPDREIPLDAFISKNHVQLADLPD 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S++GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG++R+ +
Sbjct: 120 GSIVGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLSKLETEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ E L+ E P+ GQGA+ IE ++ + +L+ +++++ + V ER FL E++G
Sbjct: 180 DIVTEYLDPELLVPAIGQGALGIECRSDDTELLDLLSKVHNQEVAECVTAERTFLKEMNG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A L F G++++ DGK E + GN D + +G++ + ++
Sbjct: 240 SCQVPIGGYATIDDNGRLTFTGLIMSPDGKQRFEQTATGN--DPVELGKEVSDILKEQGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KEIID 302
>gi|325135871|gb|EGC58483.1| porphobilinogen deaminase [Neisseria meningitidis M0579]
gi|325207582|gb|ADZ03034.1| porphobilinogen deaminase [Neisseria meningitidis NZ-05/33]
Length = 311
Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats.
Identities = 103/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|319651737|ref|ZP_08005863.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2]
gi|317396556|gb|EFV77268.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2]
Length = 311
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL S L + P + + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWVISQLKSI--DPSFEFEVKEIVTKGDKILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ EID AVHS KDMP L GL I + RED RD IS L DL
Sbjct: 60 FVKEIEQAMLDEEIDMAVHSMKDMPAVLPAGLTIGSIPEREDHRDALISKGHIKLNDLRE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S++GTSSLRR A LL R D+ + RG I+TRL+KL + AI+LA AG+ R+
Sbjct: 120 GSIVGTSSLRRGAQLLAQRPDLEIKWIRGNIDTRLSKLETEEYDAIILAAAGLSRMGWAA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L E P+ GQGA+ IE ++ + + L+ +T +V ERAFL +++G
Sbjct: 180 DVVTEFLEPEVCVPAVGQGALSIECRESDKELRALLDKFTCSETNQTVRAERAFLHKMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAGFA + G+V + DGK+ ++ + G+ D +G A +
Sbjct: 240 GCQVPIAGFATINETGEMELTGLVGSPDGKVIYKETLTGS--DPEELGVKMADMLTEQGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KELID 302
>gi|114321817|ref|YP_743500.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|122310751|sp|Q0A577|HEM3_ALHEH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114228211|gb|ABI58010.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 308
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A + L H P + ++P+ T+GDRI ++ L+ IGG
Sbjct: 1 MPQDKLRIATRRSPLAMWQAEHVAAELRRHH--PGLEVELVPMVTRGDRILDQALSRIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ + G D AVHS KD+P ++ G + L R + D F+S+ + L D
Sbjct: 59 KGLFIKELEQGMEEGRADLAVHSMKDVPWRMPDGFALPVILERHEPTDAFVSNHYRRLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +GT+SLRR+ R D+ V RG + TRL KL+ + AI+LA +G+ RL
Sbjct: 119 LPEGGHLGTASLRRQCQAKARRPDLRVSTLRGNVNTRLAKLDAGEFDAIILAASGLSRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I L E+ P+ GQGA+ IE + + QELV ++H T + ERA A L
Sbjct: 179 FDERIARRLPPEESLPAVGQGALGIECLAEDRRVQELVAPLDHGPTHTLLKAERAMNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A +G ++ G+V + DG+ G A +G +
Sbjct: 239 QGSCQVPIAGYACYQGEEIWLRGLVGSPDGQEIVRGEVRGPIAQAAELGDRLGGELLERG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AARIL 303
>gi|254375261|ref|ZP_04990741.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548]
gi|151572979|gb|EDN38633.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548]
Length = 300
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|116072875|ref|ZP_01470140.1| porphobilinogen deaminase [Synechococcus sp. BL107]
gi|116064401|gb|EAU70162.1| porphobilinogen deaminase [Synechococcus sp. BL107]
Length = 317
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 104/308 (33%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + + GQGA+ IE N P+ +++KV+ H T ERAFL
Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENKPEVMDIIKVLEHGPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G D +IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREKASGPSTDPESIGLALATTLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 GLGAGEIL 306
>gi|323451650|gb|EGB07526.1| hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens]
Length = 333
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 132/310 (42%), Positives = 189/310 (60%), Gaps = 3/310 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIP---PHNIVIIPLSTKGDRITNRTLTE 57
+E P RIGTR SPLALA A+ TR LM I + + T+GD I ++ L+E
Sbjct: 15 LEATPLRIGTRGSPLALAQAYMTRELLMKNFPEELGGEGAIQLCIMKTQGDMILDKALSE 74
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IGGKGLFT+E++ L+ E+D VHS KD+PT L + L RED RDVFIS TA+S
Sbjct: 75 IGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPAKTVLPCMLEREDTRDVFISPTAKS 134
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
LKDL SVIG++SLRR++ +L + ++FRG ++TRL KL+ A LLAYAG+K
Sbjct: 135 LKDLKDGSVIGSASLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAGLK 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +L ++ P+ QGAI I+ ++ +A + + +NHE+T+ V+CERAFL
Sbjct: 195 RMDMADEVTAVLEWDEMLPAVAQGAIGIQCRDDDARALKYIAALNHEETFTCVSCERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A LDG+CK+ IAG A L F G+V + DG+ + ++ G DA IGR+A + I+
Sbjct: 255 AALDGNCKTPIAGQARIVDGELLFDGLVSSLDGQQMYRATKTGAPADAEKIGREAGEGIK 314
Query: 298 FISNKNVFNF 307
+ F +
Sbjct: 315 AEAGIEFFEW 324
>gi|221640136|ref|YP_002526398.1| porphobilinogen deaminase [Rhodobacter sphaeroides KD131]
gi|221160917|gb|ACM01897.1| Porphobilinogen deaminase [Rhodobacter sphaeroides KD131]
Length = 310
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 7 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 67 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 126
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V
Sbjct: 127 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC
Sbjct: 187 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 246
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 247 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 306
Query: 305 FNF 307
F++
Sbjct: 307 FSW 309
>gi|81299776|ref|YP_399984.1| porphobilinogen deaminase [Synechococcus elongatus PCC 7942]
gi|161621822|ref|YP_171285.2| porphobilinogen deaminase [Synechococcus elongatus PCC 6301]
gi|123755408|sp|Q31PM2|HEM3_SYNE7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81168657|gb|ABB56997.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 7942]
Length = 320
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 159/306 (51%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIG+R S LAL + L ++ P + +ST+GD I + L +IG KGL
Sbjct: 7 RPIRIGSRKSQLALVQTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120
FT+E+E +++GE+D AVHS KD+PT+L +GL + RED D + H L+
Sbjct: 65 FTKELEVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLET 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL
Sbjct: 125 LPEGTVIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLS 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + GQGA+ IE +P+ EL+K + HE T ERAFL EL
Sbjct: 185 MADRIHQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLREL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I TL G+V + DG+ +G D +G A ++
Sbjct: 245 EGGCQVPIGVNTAIADGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQG 304
Query: 301 NKNVFN 306
K + +
Sbjct: 305 AKEILD 310
>gi|240112249|ref|ZP_04726739.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
gi|268598310|ref|ZP_06132477.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
gi|268582441|gb|EEZ47117.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
Length = 311
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIG 304
>gi|16800659|ref|NP_470927.1| porphobilinogen deaminase [Listeria innocua Clip11262]
gi|23821696|sp|Q92BF8|HEM3_LISIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|16414078|emb|CAC96822.1| hemC [Listeria innocua Clip11262]
gi|313618766|gb|EFR90670.1| porphobilinogen deaminase [Listeria innocua FSL S4-378]
Length = 309
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 166/306 (54%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL
Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E ++ E P+ GQGA+ IE + + +++ I+HE+T V ER FL +
Sbjct: 180 ENTSLKLEDISPELCLPAVGQGALAIECRETDLQICDMLASIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA G +++F G+V +DG I E R G IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG--ASPAEIGNQVAEELLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|251798413|ref|YP_003013144.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2]
gi|247546039|gb|ACT03058.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2]
Length = 323
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 12/312 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDV--HKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +GTR S LAL + L + ++ I + TKGDRI + TL+++GGK
Sbjct: 9 RTIVVGTRQSALALTQTGQVIDELKRISEKHGFDYHFEIRKIVTKGDRILDVTLSKVGGK 68
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+ GEID AVHS KDMP +L +GL A R D RD I SL DL
Sbjct: 69 GLFVKEIEQALLDGEIDMAVHSMKDMPYELPEGLMNGATPRRVDPRDCLIMKQGSSLDDL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR + L R D+ + RG I++R+ KL A++LA AG+ R+
Sbjct: 129 PAGARVGTSSLRRSSQLKNIRPDLKLDSIRGNIDSRIRKLETEGFDAVVLAAAGLSRMGW 188
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + ++ P+ GQGA+ IE + +EL+ ++N +T SV ER+FL L+
Sbjct: 189 QDRISAFIPVDLSIPAVGQGALGIECRTADAGVRELLNLLNDTETSLSVRAERSFLGALN 248
Query: 242 GSCKSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
G C+ I FA + L G+V + DG++ + R G D +GRD A
Sbjct: 249 GGCQVPIGAFAVVHKKSEDSFDNAELELTGMVGSPDGEVMLKEIRKGT--DPEQLGRDVA 306
Query: 294 QYIRFISNKNVF 305
+ +
Sbjct: 307 AALSARGADRIL 318
>gi|255634492|gb|ACU17610.1| unknown [Glycine max]
Length = 350
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 137/306 (44%), Positives = 189/306 (61%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
+IGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 43 LKIGTRGSPLALAQAYETRDKLMASHPELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ D AVHS KD+PT L + LPRED+RD FIS +A SL DL
Sbjct: 103 FTKEIDEALINGDSDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L ++V + FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 163 GSVVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G
Sbjct: 223 ENVSSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299
SC + IAG+A + F G+V + DG E SR G+ D I +G+DA + +
Sbjct: 283 SCHTPIAGYASRNEDGNCLFRGLVASPDGTRVLETSRIGSYAFEDMIKMGKDAGEELLSR 342
Query: 300 SNKNVF 305
+ F
Sbjct: 343 AGPGFF 348
>gi|59800604|ref|YP_207316.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090]
gi|240013461|ref|ZP_04720374.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI18]
gi|240117279|ref|ZP_04731341.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
gi|240120532|ref|ZP_04733494.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID24-1]
gi|254493056|ref|ZP_05106227.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291]
gi|260441191|ref|ZP_05795007.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|268602974|ref|ZP_06137141.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
gi|59717499|gb|AAW88904.1| putative porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090]
gi|226512096|gb|EEH61441.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291]
gi|268587105|gb|EEZ51781.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
Length = 311
Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIG 304
>gi|115314083|ref|YP_762806.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
OSU18]
gi|122325870|sp|Q0BP15|HEM3_FRATO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115128982|gb|ABI82169.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica OSU18]
Length = 300
Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAILSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|16803596|ref|NP_465081.1| porphobilinogen deaminase [Listeria monocytogenes EGD-e]
gi|47096721|ref|ZP_00234306.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854]
gi|224501504|ref|ZP_03669811.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-561]
gi|254831957|ref|ZP_05236612.1| porphobilinogen deaminase [Listeria monocytogenes 10403S]
gi|254898277|ref|ZP_05258201.1| porphobilinogen deaminase [Listeria monocytogenes J0161]
gi|254912230|ref|ZP_05262242.1| porphobilinogen deaminase [Listeria monocytogenes J2818]
gi|254936558|ref|ZP_05268255.1| porphobilinogen deaminase [Listeria monocytogenes F6900]
gi|284801947|ref|YP_003413812.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578]
gi|284995089|ref|YP_003416857.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923]
gi|23821694|sp|Q8Y6X5|HEM3_LISMO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|16410985|emb|CAC99634.1| hemC [Listeria monocytogenes EGD-e]
gi|47014905|gb|EAL05853.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854]
gi|258609152|gb|EEW21760.1| porphobilinogen deaminase [Listeria monocytogenes F6900]
gi|284057509|gb|ADB68450.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578]
gi|284060556|gb|ADB71495.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923]
gi|293590205|gb|EFF98539.1| porphobilinogen deaminase [Listeria monocytogenes J2818]
Length = 309
Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA + F G+V +DG I E + G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|152976881|ref|YP_001376398.1| porphobilinogen deaminase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189042874|sp|A7GTE5|HEM3_BACCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152025633|gb|ABS23403.1| porphobilinogen deaminase [Bacillus cytotoxicus NVH 391-98]
Length = 309
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLQALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPAGLTIGCIPKRVDPRDAFISKNGKSFKELAK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+ +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG+KR+ +
Sbjct: 120 GATLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEENYDAIILATAGLKRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 DVITEHLDESLCVPAVGQGALAIECREDDKDLLQLLAHMNDAATERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + + +V ++DG + + + G + +G +AA+ +
Sbjct: 240 GCQVPIAGYATLQENGKIKLHALVGSTDGSVLLKETVVGT--NPETVGLEAAERLIHQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|134302637|ref|YP_001122606.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|158513860|sp|A4IZY4|HEM3_FRATW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134050414|gb|ABO47485.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 300
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFIKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|311105076|ref|YP_003977929.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8]
gi|310759765|gb|ADP15214.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8]
Length = 315
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 113/300 (37%), Positives = 167/300 (55%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF
Sbjct: 7 LVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+T +L DL +
Sbjct: 65 KELENALLDGRADLAVHSLKDVPVDLQAPFELCAVLDRADPRDAFVSNTHDTLADLPAGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ + ++ V RG ++TRL KL+ + AI+LA AG++RL I
Sbjct: 125 VVGTSSLRRESQIRARYPELVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLERLGLGARI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L ED P+ GQGA+ IE + + + + DT V ERA +L GSC+
Sbjct: 185 RSLLEPEDSLPAAGQGALGIEIRDDRDDMRAWLAPLVSADTTSCVVAERAVSRKLGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A G TL +V + DG SR+G DA IG AAQ + +++
Sbjct: 245 VPLAAYAEIAGGTLSLRALVASPDGVRMVHASRSGPVADAQAIGEAAAQALLDAGAQDIL 304
>gi|154686951|ref|YP_001422112.1| porphobilinogen deaminase [Bacillus amyloliquefaciens FZB42]
gi|166201493|sp|A7Z7A5|HEM3_BACA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|154352802|gb|ABS74881.1| HemC [Bacillus amyloliquefaciens FZB42]
Length = 313
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKGL
Sbjct: 2 RTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIREIVTKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L +
Sbjct: 60 FVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ +
Sbjct: 120 GGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++G
Sbjct: 180 DVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + G+V + DGK ++ + G+ D IG+ A +
Sbjct: 240 GCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGH--DPEEIGKRCAAMMSEKGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KALID 302
>gi|148238945|ref|YP_001224332.1| porphobilinogen deaminase [Synechococcus sp. WH 7803]
gi|147847484|emb|CAK23035.1| Porphobilinogen deaminase [Synechococcus sp. WH 7803]
Length = 319
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 3 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 61 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEHT 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+
Sbjct: 121 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 180
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL
Sbjct: 181 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 240
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + G+ L G+V + DG+ R G+ D IGR A ++
Sbjct: 241 RELEGGCQVPIGVNSRIDGTELILTGMVASLDGQRLIRDERRGSLTDPEAIGRALAADLK 300
Query: 298 FISNKNVFN 306
+
Sbjct: 301 SRGAGEILQ 309
>gi|56707415|ref|YP_169311.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669886|ref|YP_666443.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
FSC198]
gi|224456493|ref|ZP_03664966.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370888|ref|ZP_04986893.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
tularensis FSC033]
gi|254874253|ref|ZP_05246963.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|61213244|sp|Q5NI31|HEM3_FRATT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123169616|sp|Q14JI3|HEM3_FRAT1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56603907|emb|CAG44892.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320219|emb|CAL08275.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis FSC198]
gi|151569131|gb|EDN34785.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
tularensis FSC033]
gi|254840252|gb|EET18688.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158558|gb|ADA77949.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis NE061598]
Length = 300
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQLELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|239905446|ref|YP_002952185.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1]
gi|239795310|dbj|BAH74299.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1]
Length = 311
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 162/304 (53%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ I TR S LAL A L H P + ++P+ TKGD I + L ++GGKG
Sbjct: 2 REKLVIATRGSKLALWQANHVADRLRQTH--PGLAVDLLPIKTKGDIILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P + GL + RED D +S SL L
Sbjct: 60 LFVKEIEEALLDGRADLAVHSMKDVPAEQPAGLVVGIVPEREDPCDRLLSVAYDSLAALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRKA LL R D++++D RG ++TR+ KL + + AI++A AG+ RL+
Sbjct: 120 QGATVGTSSLRRKAQLLALRPDLAIVDLRGNLDTRVKKLLDGQFDAIIVAAAGLNRLELS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L +F P+ QGA+ IE +++P+ ++ +H ++ D+V ER FL L+G
Sbjct: 180 APKAVRLGPPEFLPAAAQGALGIEYRLDDPETAAMLAFFDHPESHDAVAAERGFLGHLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA A G ++ G+V + + +G R A +G A+ + K
Sbjct: 240 GCQVPIAAHAVIDGDMIHLEGLVADPETGQTFREAASGPRSQATALGVAVAEAVLARGAK 299
Query: 303 NVFN 306
V +
Sbjct: 300 AVLD 303
>gi|77464252|ref|YP_353756.1| porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1]
gi|77388670|gb|ABA79855.1| Porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1]
Length = 314
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 71 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V
Sbjct: 131 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC
Sbjct: 191 PRVPIESEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 251 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 310
Query: 305 FNF 307
F++
Sbjct: 311 FSW 313
>gi|161617053|ref|YP_001591018.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161366417|gb|ABX70185.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 286
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 98/272 (36%), Positives = 145/272 (53%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
Q L+ +NH T V ERA L+G C+ I +A ++ +V A DG +
Sbjct: 185 TQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVM 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G+ A +G A+ + + +
Sbjct: 245 VRGERRGSPEQAEQMGISLAEELLENGARAIL 276
>gi|319779685|ref|YP_004130598.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9]
gi|317109709|gb|ADU92455.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9]
Length = 313
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 167/303 (55%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR S LA+ A + L + P N+ + ++TKGD+I ++TL++IGGKGL
Sbjct: 6 KNLRIATRESRLAVWQAEFVQKKLKSI--FPHLNVELHKMTTKGDQILDKTLSKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+SG D AVHS KD+P +L +I+ L RE+ D F+S+ ++ KDL
Sbjct: 64 FIKELESSLLSGVTDLAVHSLKDVPVELNDEFEIACILERENPMDAFVSNEYKTFKDLPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR++ + + V RG ++TRL KL++ + AI+LA AG+KRL
Sbjct: 124 GAIVGTSSLRRESQIRAKFPHLVVKPLRGNLDTRLKKLDDGQYSAIILAAAGLKRLNMMD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK ++I+D P+ GQGA+ IE + +E++ ++HE+T+ V+ ER L GS
Sbjct: 184 RIKSFVSIDDSLPAVGQGALAIEILKDKFALKEMLSYLHHEETFKCVSAERIVSQYLGGS 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ +A A +V + DG G+ + ++ A + +
Sbjct: 244 CQVPLAAHACVINDLFQVRALVASPDGSRILRAESFGSPDEYESVATTVALNLIDQGARE 303
Query: 304 VFN 306
+ N
Sbjct: 304 IIN 306
>gi|189346422|ref|YP_001942951.1| porphobilinogen deaminase [Chlorobium limicola DSM 245]
gi|238058917|sp|B3EIN1|HEM3_CHLL2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189340569|gb|ACD89972.1| porphobilinogen deaminase [Chlorobium limicola DSM 245]
Length = 313
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 120/307 (39%), Positives = 170/307 (55%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPELDITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS L DL
Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGAKLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 LNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G
Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCKAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIRF 298
C+ I +A K TL V + DG + E++R+G + A G A+ +
Sbjct: 240 GCQIPIGAYASFKNGTLKLLAFVGSVDGTVGINNEITRSGLTSPDQAEEAGIALAEELLK 299
Query: 299 ISNKNVF 305
+
Sbjct: 300 QGADKIL 306
>gi|268594132|ref|ZP_06128299.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|268596184|ref|ZP_06130351.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
gi|268547521|gb|EEZ42939.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|268549972|gb|EEZ44991.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
Length = 313
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 300
Query: 301 NKNVFN 306
+ +
Sbjct: 301 AQELIG 306
>gi|121634334|ref|YP_974579.1| porphobilinogen deaminase [Neisseria meningitidis FAM18]
gi|120866040|emb|CAM09778.1| putative porphobilinogen deaminase [Neisseria meningitidis FAM18]
gi|325131787|gb|EGC54488.1| porphobilinogen deaminase [Neisseria meningitidis M6190]
gi|325137677|gb|EGC60254.1| porphobilinogen deaminase [Neisseria meningitidis ES14902]
Length = 311
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|325141763|gb|EGC64215.1| porphobilinogen deaminase [Neisseria meningitidis 961-5945]
gi|325197751|gb|ADY93207.1| porphobilinogen deaminase [Neisseria meningitidis G2136]
Length = 311
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|241667490|ref|ZP_04755068.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876036|ref|ZP_05248746.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842057|gb|EET20471.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 300
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 168/303 (55%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL + + I + T+GD I ++ L +IGGK L
Sbjct: 2 KQIVIASRESKLALWQTNYVKDRIQQEL---NIRCQINTMKTQGDIILDKPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E +++ + D AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLPR 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRGDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELNE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ + + +G+ AQ + +
Sbjct: 239 CHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLIGD--NPMRLGKLLAQEMIELGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|126653692|ref|ZP_01725611.1| porphobilinogen deaminase [Bacillus sp. B14905]
gi|126589729|gb|EAZ83864.1| porphobilinogen deaminase [Bacillus sp. B14905]
Length = 310
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 116/299 (38%), Positives = 164/299 (54%), Gaps = 5/299 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L P + + TKGD+I + L+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWFINELKAAGA--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS DL
Sbjct: 60 FVKEIEQALYDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFADLPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+V+GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL E
Sbjct: 120 GAVVGTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L++ED P+ QG++ IE ++ + + + + TW + ERAFLA +DG
Sbjct: 180 DVVTEFLSVEDCLPAVAQGSLGIECRGDDTELLAELAKLTDQLTWQEAHAERAFLAAMDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A G + G+V A D + ++ + G+ DA IG + A +
Sbjct: 240 GCQVPIAGYATSNGDEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELATILTKQGA 296
>gi|159486921|ref|XP_001701485.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
gi|158271667|gb|EDO97482.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
Length = 349
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 132/309 (42%), Positives = 188/309 (60%), Gaps = 5/309 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIG 59
K +IGTR SPLALA A+ TR L + I+ + T GD+I N+ L +IG
Sbjct: 39 ATKTVKIGTRGSPLALAQAYMTRDLLKKSFPELSEEGALEIVIIKTTGDKILNQPLADIG 98
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+EI+ L+SG+ID AVHS KD+PT L +G + LPRED+RDVFIS A+ L
Sbjct: 99 GKGLFTKEIDDALLSGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPVAKDLS 158
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 159 ELPAGAIVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRL 218
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + L+I++ P+ QGAI I ++ ++ L+ +NHE+T +V CERAFL
Sbjct: 219 DMTEHITKTLSIDEMLPAVSQGAIGIACRTDDGASRNLLAALNHEETRIAVVCERAFLTA 278
Query: 240 LDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYI 296
LDGSC++ IAG+A+ L+F G+V DGK SR DA+ G +A + +
Sbjct: 279 LDGSCRTPIAGYAHKGADGMLHFSGLVATPDGKQIMRASRVVPFTEADAVKCGEEAGKEL 338
Query: 297 RFISNKNVF 305
+ K +F
Sbjct: 339 KANGPKELF 347
>gi|87123876|ref|ZP_01079726.1| Porphobilinogen deaminase [Synechococcus sp. RS9917]
gi|86168445|gb|EAQ69702.1| Porphobilinogen deaminase [Synechococcus sp. RS9917]
Length = 317
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 104/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEQAH--PGLPISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNADHK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L +V+GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LETLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDAGDYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE P EL+KV+ H T ERAFL
Sbjct: 179 RLGFADRIHQIIPSHISLHAVGQGALGIECVEGQPDVLELIKVLEHSPTASRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + L G+V + DGK R G A IG+ A ++
Sbjct: 239 RELEGGCQVPIGVNTRIEANELVLTGMVASLDGKRLIRDERRGTVDKAEAIGQLLAADLK 298
Query: 298 FISNKNVFN 306
++
Sbjct: 299 SQGAGDILQ 307
>gi|313668981|ref|YP_004049265.1| porphobilinogen deaminase [Neisseria lactamica ST-640]
gi|313006443|emb|CBN87906.1| putative porphobilinogen deaminase [Neisseria lactamica 020-06]
Length = 326
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPKGAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKLADDG 313
Query: 301 NKNVFN 306
+ +
Sbjct: 314 ARELIG 319
>gi|332559141|ref|ZP_08413463.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N]
gi|332276853|gb|EGJ22168.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N]
Length = 310
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 184/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 7 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 67 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFADGGLADLPQG 126
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK ++V
Sbjct: 127 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDEV 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC
Sbjct: 187 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVRTGHRLAAERSFLLKLDGSC 246
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 247 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 306
Query: 305 FNF 307
F++
Sbjct: 307 FSW 309
>gi|325202672|gb|ADY98126.1| porphobilinogen deaminase [Neisseria meningitidis M01-240149]
Length = 311
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGVVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|315303323|ref|ZP_07873952.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596]
gi|313628303|gb|EFR96807.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596]
Length = 309
Score = 362 bits (931), Expect = 2e-98, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 170/306 (55%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PSIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L G ID AVHS KD+P+ L +GL I A RE D F+ +T + KDL
Sbjct: 60 LFVSEVEQALSDGLIDFAVHSMKDVPSSLKEGLTIGAIPKRESALDCFVFNTVATFKDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A +LR R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 KGAVIGTSSLRRAAQILRKRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ + +++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIPPELCLPAVGQGALAIECRESDQQICDMLASIHHEETGACVEAERIFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA T++F G+V SDG ++G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKTDGTVHFKGLVGNSDGTTILSAEQSGK--NPETIGNQVAESLLSE 297
Query: 300 SNKNVF 305
++
Sbjct: 298 GAASII 303
>gi|169829410|ref|YP_001699568.1| porphobilinogen deaminase [Lysinibacillus sphaericus C3-41]
gi|238058924|sp|B1HVD6|HEM3_LYSSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|168993898|gb|ACA41438.1| Porphobilinogen deaminase [Lysinibacillus sphaericus C3-41]
Length = 310
Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 115/299 (38%), Positives = 165/299 (55%), Gaps = 5/299 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L P + + TKGD+I + L+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWFINELKAAGA--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS +L
Sbjct: 60 FVKEIEQALYEKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFSELPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+V+GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL E
Sbjct: 120 GAVVGTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L++ED P+ QG++ IE ++ + + + + + TW + ERAFLA +DG
Sbjct: 180 DVVTEFLSVEDCLPAVAQGSLGIECREDDTELLDELAKLTDQLTWQEAHAERAFLAAMDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A G + G+V A D + ++ + G+ DA IG + A +
Sbjct: 240 GCQVPIAGYATSNGEEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELATILTKQGA 296
>gi|313893126|ref|ZP_07826703.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442479|gb|EFR60894.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 305
Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 104/277 (37%), Positives = 158/277 (57%), Gaps = 2/277 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT
Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L +
Sbjct: 63 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I
Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+
Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ L ++ + DGK +E +G
Sbjct: 243 VPMGVHGTIDKGQLTLKAMIASLDGKTVYEGEISGPA 279
>gi|254804423|ref|YP_003082644.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14]
gi|254667964|emb|CBA04229.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14]
Length = 311
Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQASAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|212638453|ref|YP_002314973.1| porphobilinogen deaminase [Anoxybacillus flavithermus WK1]
gi|212559933|gb|ACJ32988.1| Porphobilinogen deaminase (hydroxymethylbilane synthase)
[Anoxybacillus flavithermus WK1]
Length = 313
Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 159/304 (52%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P + + TKGD+I + TL+++GGKGL
Sbjct: 7 RKIIVGSRRSKLALTQTNWVIEQLKQLGA--PFEFEVKEIVTKGDQILHVTLSKVGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ GEID AVHS KDMP L GL I RED RDV IS + L
Sbjct: 65 FVKEIEQAMLDGEIDFAVHSMKDMPAVLPDGLVIGCVPKREDHRDVLISKGHIPFEQLPS 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+ +
Sbjct: 125 GAIVGTSSLRRSAQLLAVRPDLQIQWIRGNIDTRLAKLQTDAYDAIILAAAGLHRMGWAK 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI + L + P+ GQGA+ IE N+ + + + + T + ERAFL ++G
Sbjct: 185 EVITQYLPTDICVPAVGQGALAIECRENDAELLHWLNKLTDKQTERATRAERAFLQHIEG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ +AG+AY + +V +G + G + +G +AA+ + K
Sbjct: 245 GCQVPVAGYAYVDEDAIVLTALVATPNGTEVLKEVVKGT--EPEKVGTEAAKRLIERGAK 302
Query: 303 NVFN 306
+
Sbjct: 303 QLIE 306
>gi|254828209|ref|ZP_05232896.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165]
gi|258600598|gb|EEW13923.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165]
Length = 309
Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L KGL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKKGLIIGAIPKRESPLDCFVFNQVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA + F G+V +DG I E + G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|313608617|gb|EFR84478.1| porphobilinogen deaminase [Listeria monocytogenes FSL F2-208]
Length = 309
Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 113/307 (36%), Positives = 166/307 (54%), Gaps = 7/307 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L
Sbjct: 60 LFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQMNALDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 HGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLXXXXPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA ++F G+V +DG I E + G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG--ANPSEIGNKVAEDLLSK 297
Query: 300 SNKNVFN 306
+
Sbjct: 298 GADTIIQ 304
>gi|196034473|ref|ZP_03101882.1| porphobilinogen deaminase [Bacillus cereus W]
gi|228948178|ref|ZP_04110462.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|195993015|gb|EDX56974.1| porphobilinogen deaminase [Bacillus cereus W]
gi|228811536|gb|EEM57873.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 309
Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAYINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG I + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|89098939|ref|ZP_01171819.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911]
gi|89086343|gb|EAR65464.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911]
Length = 311
Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + + + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWVMDQLKKI--DDSFEFEVKEIVTKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ EID AVHS KDMP L +GL I + RED RD IS Q+L L
Sbjct: 60 FVKEIEQAMLDEEIDMAVHSMKDMPAVLPEGLVIGSIPEREDHRDALISKGHQTLDQLKP 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+V+GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+
Sbjct: 120 GAVVGTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLETEEYDAIILAAAGLSRMGWTT 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E L E P+ GQGA+ IE ++ + EL+ T +V ERAFL +++G
Sbjct: 180 DTVSEFLEPEVCLPAVGQGALSIECRESDKELLELLSKFTCGTTNQTVRAERAFLHKMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + G+V + DGK ++ G D + +G A+ +
Sbjct: 240 GCQVPIAGYAVLNEKDEIELTGLVASPDGKTIYKEKVTG--ADPVEVGLRTAEKLIEKGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KKLID 302
>gi|194097777|ref|YP_002000818.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945]
gi|239998278|ref|ZP_04718202.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|240015900|ref|ZP_04722440.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA6140]
gi|240080040|ref|ZP_04724583.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
gi|240114994|ref|ZP_04729056.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|240122831|ref|ZP_04735787.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|240125027|ref|ZP_04737913.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|240127540|ref|ZP_04740201.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|268600662|ref|ZP_06134829.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|268681446|ref|ZP_06148308.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|268683614|ref|ZP_06150476.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|268685917|ref|ZP_06152779.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|193933067|gb|ACF28891.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945]
gi|268584793|gb|EEZ49469.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|268621730|gb|EEZ54130.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|268623898|gb|EEZ56298.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|268626201|gb|EEZ58601.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|317163558|gb|ADV07099.1| porphobilinogen deaminase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 311
Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIG 304
>gi|126732359|ref|ZP_01748159.1| porphobilinogen deaminase [Sagittula stellata E-37]
gi|126707228|gb|EBA06294.1| porphobilinogen deaminase [Sagittula stellata E-37]
Length = 316
Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats.
Identities = 137/307 (44%), Positives = 185/307 (60%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA AFETR LM +P I + T GD +R L EIG
Sbjct: 9 PLKIGTRGSPLALAQAFETRERLMAAFSLPEDAFEICIIKTTGDDRAMIAADRPLKEIGN 68
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L++G ID AVHS KDMPT+ +GL + YLPRED RD FI H S+ D
Sbjct: 69 KGLFTKEIEEALVAGRIDIAVHSMKDMPTEQPEGLILDCYLPREDPRDAFICHDHGSIHD 128
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +V+G+SSLRR+A LL R D+ V++FRG ++TRL KL++ A A LA AG+ R+K
Sbjct: 129 LPVGAVVGSSSLRRRAQLLHRRPDLDVVEFRGNLQTRLKKLSDGVATATFLACAGLNRMK 188
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE +++ QE++ I+ DT + ERAFLA L
Sbjct: 189 IPGVPMFPIAEVDMLPAIAQGAIGIERRIDDATTQEMLAAIHDHDTGLRLAAERAFLARL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+TL+ G +L DG I H +G + +GR A + +
Sbjct: 249 DGSCETPIAGLAELDGATLHLRGEILRPDGSISHAGEISGAATEGAALGRTLADDLLSRA 308
Query: 301 NKNVFNF 307
+ F++
Sbjct: 309 GEGFFDW 315
>gi|83941602|ref|ZP_00954064.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36]
gi|83847422|gb|EAP85297.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36]
Length = 317
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 131/305 (42%), Positives = 177/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG
Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA
Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL +
Sbjct: 129 EGAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG
Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G TL+ G VL DG R+G +G D AQ + +
Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|94676875|ref|YP_588539.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123384158|sp|Q1LU25|HEM3_BAUCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94220025|gb|ABF14184.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 311
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 99/305 (32%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I TR SPLA+ A R+ L+ + P I ++P+ T GD I ++ L + GG
Sbjct: 1 MLNNILKIATRQSPLAIWQANYVRNQLLSFY--PTLLIELVPIVTSGDLILDKPLMKAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +E+E+ ++ D AVHS KD+ +G+ ++ RED RD FIS S+
Sbjct: 59 KRLFIKELEQAMLERRADIAVHSMKDITISFPEGIGLAVLCAREDPRDAFISTHYASIDL 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSS+RR+ L R D+ + D RG I TRL KL+ + A++LA AG+KRL
Sbjct: 119 LPTGAVVGTSSMRRQCQLRERRPDLVMRDLRGNIGTRLEKLDKGEYDALILAAAGLKRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ I++ + P+ GQG I IE + + ++ ++H T V+ ERA A+L
Sbjct: 179 LAHRIRMIIDPTELLPAVGQGVIGIEYRLEDTHILSILAPLHHSATALRVSAERAMNAKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V + DG + A +G+ A + +
Sbjct: 239 AGGCQVPIGSYAEIEGDQIWLRALVGSPDGSLIIRSEGRAPLSQAEILGQSIANDLLYRG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 AESIL 303
>gi|94987453|ref|YP_595386.1| porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00]
gi|123262097|sp|Q1MPL2|HEM3_LAWIP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94731702|emb|CAJ55065.1| Porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00]
Length = 309
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 115/303 (37%), Positives = 165/303 (54%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LA A + L ++ + ++ + TKGD I + L ++GGKGL
Sbjct: 2 KKITIATRGSKLAFWQANYIKDQLQKMYSY--LEVDLMVIKTKGDHILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+SGE DCAVHS KD+P +L L ++A RED D+F+S +K L
Sbjct: 60 FVKEIEEALLSGEADCAVHSMKDVPMELPFELCLAAITEREDPTDMFLSIKYSGVKSLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++++GTSSLRR+A LL R D+ +I RG I+TRL KL + AI++A AGIKRL
Sbjct: 120 NALVGTSSLRRQAQLLALRPDLQIIPLRGNIDTRLRKLMAEEFDAIIMATAGIKRLGLIA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L P+ GQGA+ IE EL +NH++T+ + ER FLA LDG
Sbjct: 180 PYMSSLPCSVMLPAVGQGALGIEVQKERQDVLELFSFLNHKETYHCIQAERDFLAGLDGG 239
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A K T+ G+V SDG + + DA +IG ++ +
Sbjct: 240 CQVPIAGYATICKQETICLEGLVAKSDGSVMIRNRLERSVSDAYDIGMTLSKILLAEGAD 299
Query: 303 NVF 305
++
Sbjct: 300 DIL 302
>gi|229062158|ref|ZP_04199482.1| Porphobilinogen deaminase [Bacillus cereus AH603]
gi|228717141|gb|EEL68817.1| Porphobilinogen deaminase [Bacillus cereus AH603]
Length = 309
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 117/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDITLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + GN D +G +AA +
Sbjct: 240 GCQVPIAGYATLKENDEIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|218905666|ref|YP_002453500.1| porphobilinogen deaminase [Bacillus cereus AH820]
gi|228917102|ref|ZP_04080660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929511|ref|ZP_04092530.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935783|ref|ZP_04098595.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229124004|ref|ZP_04253196.1| Porphobilinogen deaminase [Bacillus cereus 95/8201]
gi|254724608|ref|ZP_05186391.1| porphobilinogen deaminase [Bacillus anthracis str. A1055]
gi|226740627|sp|B7JQ57|HEM3_BACC0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218537761|gb|ACK90159.1| porphobilinogen deaminase [Bacillus cereus AH820]
gi|228659306|gb|EEL14954.1| Porphobilinogen deaminase [Bacillus cereus 95/8201]
gi|228823840|gb|EEM69660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830090|gb|EEM75708.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842520|gb|EEM87610.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 309
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|300024951|ref|YP_003757562.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526772|gb|ADJ25241.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888]
Length = 310
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 138/305 (45%), Positives = 184/305 (60%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RIGTR SPLALA A E R L H + I I + T GDR+T+R L++IGG
Sbjct: 1 MQAARIRIGTRGSPLALAQAHEVRDRLAKAHGLSEDAISITIIKTTGDRVTDRPLSDIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE L + EID AVHS KDM T+L GL + A LPRED RD FIS ++
Sbjct: 61 KGLFTKEIEDALFAREIDIAVHSMKDMQTELPDGLALGAVLPREDPRDAFISLKHANISA 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRRK+ +L R D+SVIDFRG +ETRL KL + A A LA AG+ RL
Sbjct: 121 LPTGAIVGTSSLRRKSQVLSIRPDLSVIDFRGNVETRLRKLKDGIAEATFLAVAGLNRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I I+ D P+ QGAI +E + +A+ V +N ++ +V ERAFLA L
Sbjct: 181 LSDRITAIVPSADMLPAAAQGAIGLEIRTGDKEAEAFVAPLNDVNSQRAVTAERAFLARL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+GSC++ IA A G L F G VL+ DG+ ++VSR+G + +IG AA + +
Sbjct: 241 EGSCRTPIAAHATIDGEQLSFRGQVLSLDGQQKYDVSRSGAANASRDIGLAAADEVLSKA 300
Query: 301 NKNVF 305
+ +
Sbjct: 301 DPALL 305
>gi|254431329|ref|ZP_05045032.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001]
gi|197625782|gb|EDY38341.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001]
Length = 321
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 151/313 (48%), Gaps = 9/313 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H I I ++T+GD+I + L +IG
Sbjct: 1 MAGSTLRIASRRSQLAMVQTHWVRDELAKAHD--DLTITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHAKHRDKT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDEPVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
EL+G C+ I G L G+V + DG+ G + D IG A
Sbjct: 239 RELEGGCQVPIGVNTRFDGAGESGELVLTGMVASLDGQRLIRDEARGPQDDPEAIGIALA 298
Query: 294 QYIRFISNKNVFN 306
+ +R +
Sbjct: 299 RSLRNQGAGEILE 311
>gi|114778663|ref|ZP_01453479.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1]
gi|114551128|gb|EAU53689.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1]
Length = 333
Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats.
Identities = 115/301 (38%), Positives = 157/301 (52%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L + P ++ + T+GD+I + L ++GGKGLFT
Sbjct: 27 IRIATRRSPLALWQAEYIAAELEKM--SPDVTTELVKIVTRGDKILDVPLAKVGGKGLFT 84
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ L G D AVHS KD+PT+L +G I A R D RD + T L L +
Sbjct: 85 KEIDEALFDGRADVAVHSMKDVPTQLPEGTSIRALPERADPRDAAATITGGGLDTLPEGA 144
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR A L + RG I+TRL+K+ + AI+LA AGI+R+ E +
Sbjct: 145 TIGTSSLRRVAQLQARFPTFKFVSVRGNIQTRLSKM-GQEVDAIILAAAGIRRMGMEDQM 203
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E P+ QG + I+T ++ LV +NH DT D ERAFLA L+G C+
Sbjct: 204 HEFIDTEMLLPAVAQGTLGIQTRNDDDVVNALVDRLNHADTVDRTRAERAFLARLEGGCQ 263
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA FA G L G+V + DGKI G R D +G A I + +
Sbjct: 264 VPIAAFATLDGDQLTLKGLVGSVDGKIVIRREIVGLRRDGAAMGIALADEILDAGARPIL 323
Query: 306 N 306
Sbjct: 324 E 324
>gi|254372115|ref|ZP_04987608.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569846|gb|EDN35500.1| hydroxymethylbilane synthase [Francisella novicida GA99-3549]
Length = 300
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 166/303 (54%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEIAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDG + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGNKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|122842|sp|P13446|HEM3_EUGGR RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|18412|emb|CAA33759.1| unnamed protein product [Euglena gracilis]
Length = 480
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 105/322 (32%), Positives = 162/322 (50%), Gaps = 21/322 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+ TR SPLA+ A +S L + P + + P+ST+GD+I + L ++GGKGL
Sbjct: 150 KTVRVATRKSPLAMWQAEFIQSELERL--WPGITVELQPMSTRGDKILDSPLAKVGGKGL 207
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
F +E+E L+ D AVHS KD+P +L +GL + R D D + +SL+D
Sbjct: 208 FVKELETALLENRSDIAVHSTKDVPMELPEGLVLGVICKRHDPCDAIVFPKGSNLKSLED 267
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ LL R D+ ++ RG + TRL KL++ AI+LA AG+KRL
Sbjct: 268 LPHGARVGTSSLRRQCQLLLKRPDLKFLELRGNVNTRLAKLDSGDYDAIILAAAGLKRLG 327
Query: 181 KEKV----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
I++ P+ GQGA+ IE N+P+ L++ ++H +V CERA
Sbjct: 328 FSDRVLPGETNIIDPNVMCPAAGQGALSIELRTNDPEIAALLEPLHHIPDAVTVACERAM 387
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGN---------RCD 284
L+G C+ I+GFA K L V + GK I + + +
Sbjct: 388 NRRLNGGCQVPISGFAQLKDGQLRMEARVGSVTGKGPLIIQSKTFRLPWSGRTWPQLQKE 447
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
+ +G + A + + +
Sbjct: 448 SEALGVEVADMLLADGAQAYLD 469
>gi|325133945|gb|EGC56601.1| porphobilinogen deaminase [Neisseria meningitidis M13399]
gi|325143900|gb|EGC66212.1| porphobilinogen deaminase [Neisseria meningitidis M01-240013]
gi|325206609|gb|ADZ02062.1| porphobilinogen deaminase [Neisseria meningitidis M04-240196]
Length = 311
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ + P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESESLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|229048181|ref|ZP_04193750.1| Porphobilinogen deaminase [Bacillus cereus AH676]
gi|228723168|gb|EEL74544.1| Porphobilinogen deaminase [Bacillus cereus AH676]
Length = 309
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 DVITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAYINDTITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|255262067|ref|ZP_05341409.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
gi|255104402|gb|EET47076.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
Length = 326
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 134/305 (43%), Positives = 180/305 (59%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P IGTR SPLALA A+ETR+ L +P I+ + T GDRI +R L EIGGKG
Sbjct: 21 QSPLNIGTRGSPLALAQAYETRARLSAAFDLPSEAFTIVVIKTTGDRIIDRPLKEIGGKG 80
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE ++ G+ID AVHS KDMP GL I YLPRED RD FI+ LKDLA
Sbjct: 81 LFTREIEDAMLQGDIDIAVHSMKDMPVLQPDGLLIDTYLPREDNRDAFIALDGSGLKDLA 140
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR A L+ R D+++++FRG ++TRL KL + A A LA AG+ RLK +
Sbjct: 141 EGATVGTSSLRRHAQLMNRRPDLNIVEFRGNLQTRLKKLGDGVAEATFLAMAGLNRLKMD 200
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + + +D P+ QGAI IE ++ + E+++ I+ T + ERAFL LDG
Sbjct: 201 DVPRTAIETDDMLPAVAQGAIGIERRADDSRMAEMLEAIHDGPTGQRLAAERAFLKALDG 260
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G LY G VL DG + +G D +GR A + + +
Sbjct: 261 SCETPIAGLAELNGGILYLRGEVLRVDGSDTVYDAASGPIEDGAEMGRVMAAKLLAEAGE 320
Query: 303 NVFNF 307
F++
Sbjct: 321 GFFDW 325
>gi|229093561|ref|ZP_04224662.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42]
gi|228689770|gb|EEL43576.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42]
Length = 309
Score = 361 bits (928), Expect = 5e-98, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG I + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|225175616|ref|ZP_03729610.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1]
gi|225168945|gb|EEG77745.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1]
Length = 314
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 163/304 (53%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK +G+R S LAL L P + + + T+GD+I + L++IG KG
Sbjct: 2 KKTIVVGSRDSELALTQTHFVIGELQK--HFPDVDFTVKHIKTEGDKILDVALSKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121
LF +EIE L+S EID AVHS KD+PT + GLQI+ RED RD +I+ ++ L D
Sbjct: 60 LFVKEIENALLSKEIDFAVHSMKDVPTAVPDGLQITTITEREDPRDCYIAKDGKTRLFDT 119
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A LL RSD ++ RG + TR KL+ H I+LAYAG+ RL
Sbjct: 120 PQGAVIGTSSLRRSAQLLHQRSDFEIVPIRGNLNTRFRKLSEQDMHGIILAYAGVYRLGW 179
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EI++ E P+ GQGA+ IET ++ +V +NH+ T ++ ERAFL +L+
Sbjct: 180 ADKITEIIDFEKSLPAVGQGALGIETRSDDDFTINIVSALNHDTTASAILAERAFLRQLE 239
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + + L G+V DG G+ ++ +G+ AQ +
Sbjct: 240 GGCQVPIGAYGRLEAEELVLDGVVAGLDGSTVLRDQVRGSADESDALGKKLAQKMVERGA 299
Query: 302 KNVF 305
+
Sbjct: 300 DEIL 303
>gi|302838564|ref|XP_002950840.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f.
nagariensis]
gi|300263957|gb|EFJ48155.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f.
nagariensis]
Length = 355
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 137/309 (44%), Positives = 190/309 (61%), Gaps = 5/309 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIG 59
K +IGTR SPLALA A+ TR L + I+ + T GD+I N+ L +IG
Sbjct: 45 ATKTVKIGTRGSPLALAQAYLTRDLLKKNFPELNEEGALEIVIIKTTGDKILNQPLADIG 104
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+EI+ L+ G+ID AVHS KD+PT L +G + LPRED+RDVFIS TA+ L
Sbjct: 105 GKGLFTKEIDDALLGGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPTAKDLS 164
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 165 ELPAGAVVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRL 224
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +IL+IE+ P+ QGAI I + +++L+ +NHE+T +V CERAFLA
Sbjct: 225 DMTAHITKILSIEEMLPAVSQGAIGIACRTQDDASRKLLAALNHEETRIAVVCERAFLAA 284
Query: 240 LDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYI 296
LDGSC++ IAG+A+ L+F G+V DGK SR + DA+ G DA + +
Sbjct: 285 LDGSCRTPIAGYAHKGSDGQLHFSGLVATPDGKQMMRTSRVASFTDADAVKAGEDAGREL 344
Query: 297 RFISNKNVF 305
+ K +F
Sbjct: 345 KATGPKELF 353
>gi|118479630|ref|YP_896781.1| porphobilinogen deaminase [Bacillus thuringiensis str. Al Hakam]
gi|196039380|ref|ZP_03106686.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99]
gi|196044836|ref|ZP_03112070.1| porphobilinogen deaminase [Bacillus cereus 03BB108]
gi|225866445|ref|YP_002751823.1| porphobilinogen deaminase [Bacillus cereus 03BB102]
gi|229186706|ref|ZP_04313864.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1]
gi|158512516|sp|A0RJ81|HEM3_BACAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800233|sp|C1ETR0|HEM3_BACC3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118418855|gb|ABK87274.1| hydroxymethylbilane synthase [Bacillus thuringiensis str. Al Hakam]
gi|196024324|gb|EDX62997.1| porphobilinogen deaminase [Bacillus cereus 03BB108]
gi|196030007|gb|EDX68608.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99]
gi|225787726|gb|ACO27943.1| hydroxymethylbilane synthase [Bacillus cereus 03BB102]
gi|228596719|gb|EEK54381.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1]
Length = 309
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|228910299|ref|ZP_04074116.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200]
gi|228849359|gb|EEM94196.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200]
Length = 309
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + T+ +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|255020135|ref|ZP_05292205.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756]
gi|254970428|gb|EET27920.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756]
Length = 319
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 117/302 (38%), Positives = 170/302 (56%), Gaps = 4/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR SPLAL A R+ L+ H P + I+P++T+GDR+ L EIGGKGLF
Sbjct: 17 PLRIGTRASPLALWQAEHVRAGLLRAH--PEIPVEIVPMTTQGDRMLAVPLHEIGGKGLF 74
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ G +D AVHS KD+P + +GL+I+A L RED+RD ++S+T +DL
Sbjct: 75 VKEIEAALLEGTVDLAVHSMKDVPAQQPEGLEIAAILAREDVRDAWVSNTFARPEDLPQG 134
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+G+SSLRR+A LL V+D RG + TRL KL+ I+LA AG+KRL +
Sbjct: 135 GRVGSSSLRRRAQLLHRLPQTVVLDLRGNVATRLRKLDAGDYDGIVLAAAGLKRLGLLER 194
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L E P+ GQGAI +E ++ + + L+K +N T V ER L G C
Sbjct: 195 IRHYLEPELSLPAVGQGAIGVEIRSDDARTRTLLKPLNDPTTSRCVGAERHMNRLLGGDC 254
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A A G+ L G+V + DG+ G+ A ++G AQ + +++
Sbjct: 255 RLPVAALAEADGTGLRLRGLVASPDGRELLRAEAVGSL--AHSVGEQVAQALLAQGAQHI 312
Query: 305 FN 306
+
Sbjct: 313 ID 314
>gi|206969979|ref|ZP_03230933.1| porphobilinogen deaminase [Bacillus cereus AH1134]
gi|229192675|ref|ZP_04319634.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876]
gi|206735667|gb|EDZ52835.1| porphobilinogen deaminase [Bacillus cereus AH1134]
gi|228590765|gb|EEK48625.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876]
Length = 309
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|194336060|ref|YP_002017854.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1]
gi|238058995|sp|B4SFI2|HEM3_PELPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194308537|gb|ACF43237.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1]
Length = 313
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 122/307 (39%), Positives = 171/307 (55%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPELDITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT GL I+++ RED RDV IS LKDL
Sbjct: 60 LFTKDIEKHLITKEIDLAVHSLKDVPTATPDGLIITSFTEREDTRDVIISKNGVKLKDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ + D RG + TR K +N + A++LAYAG+ RL
Sbjct: 120 QNAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDNGEFDAMMLAYAGVFRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+V+++NH T ERA L L G
Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNG--NRCDAINIGRDAAQYIRF 298
C+ I +A K TL V + DGKI +++ G + A G + A+ +
Sbjct: 240 GCQIPIGAYASFKNGTLTLLAYVGSVDGKIGLHNNITKTGLTSPEQAEAAGIELAEELLK 299
Query: 299 ISNKNVF 305
+
Sbjct: 300 QGADAIL 306
>gi|21328661|gb|AAM48667.1| porphobilinogen deaminase [uncultured marine proteobacterium]
Length = 316
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 134/305 (43%), Positives = 187/305 (61%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K P IGTR SPLALA A+ETR+ L +P I+ + T GDR+T+R L EIGGKG
Sbjct: 9 KTPLNIGTRGSPLALAQAYETRARLAKAFDLPFEAFEIVVIMTTGDRVTDRPLKEIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ ++ G ID AVHS KDMP GL + YLPRED+RD FIS + +L DL+
Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPVLQPDGLVLDTYLPREDVRDAFISLSGGALSDLS 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A L R D+ V++FRG ++TRL KL N A A LA AG+KRL +
Sbjct: 129 PGAVVGTSSLRRQAQLKLRRPDLQVVEFRGNLQTRLKKLENQVAEATFLAMAGLKRLNMD 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+V ++ + ++D P+ QGAI IE +N+ + +++ I+ +T + ERAFLA LDG
Sbjct: 189 EVPRQAIEVDDMLPAVAQGAIGIERRINDGRMADMLAAIHDRETGQRLAAERAFLAALDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG + +GST+ G VL DG D G++ A + + +
Sbjct: 249 SCETPIAGLSELQGSTMRLRGEVLRPDGSDAIHDDMVVPIEDGAQAGKEMAAKLLEQAGR 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|225023639|ref|ZP_03712831.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC
23834]
gi|224943521|gb|EEG24730.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC
23834]
Length = 312
Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M I +R S LA+ A +S L ++ P + I+ L+T+GDRI ++TL++IGG
Sbjct: 1 MIPHKLVIASRESALAMWQAEHIQSRLRTLY--PGCEVSILGLTTQGDRILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A RE D F+S+ Q L+D
Sbjct: 59 KGLFVKELEQALSDGRADLAVHSIKDVPMVLPEGFALAAICERESPFDAFVSNNYQRLED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 119 LPAGAVVGTSSLRREAQLRARFPQLQVAPLRGNVQTRLAKLDQGDYAAIILAEAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ D P+ GQGA+ IE + + L+ +NH T V ERA L
Sbjct: 179 LTQRIRHTLSPADSLPAAGQGALGIEIAAHRSELLPLLAPLNHAQTAACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L +G+V DG + R A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTKQDGLLTLHGLVGHPDGSVILREEAQAPREYADALGRAVAKKLADNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AQELI 303
>gi|294670387|ref|ZP_06735269.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307851|gb|EFE49094.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 312
Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL++IGGK
Sbjct: 3 TPKKLVIASRESMLAMWQAEHIKGRLKALY--PDCEVEILGMTTRGDQILDRTLSKIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ L+++
Sbjct: 61 GLFIKELEQALQDGRADLAVHSIKDVPMELPEGFALAAIGERASPFDAFVSNQYARLEEM 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR+A L +++ RG ++TRL+KL+N A++LA AG++RL
Sbjct: 121 PEGAIVGTSSLRREAQLRAKFPHLTIQPLRGNVQTRLSKLDNGDYDAVILAAAGLQRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+EIL+ D P+ GQGA+ IE ++++ +NHE+T V ERA L
Sbjct: 181 DSRIREILSPADSLPAAGQGALGIEIAARRTDLADILRPLNHEETAACVTAERALARALG 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ +A + + L G+V DG + E S A +GR A+ +
Sbjct: 241 GSCQVPLAAYCVMEDGLLTLNGLVGHPDGSVIIEASAQAPDAYANALGRAVAKRLADDGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 EELI 304
>gi|229087029|ref|ZP_04219183.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44]
gi|228696292|gb|EEL49123.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44]
Length = 309
Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S +LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFAELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+ +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GATLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V+ ER FL +L+G
Sbjct: 180 DVITEHLDETLCVPAVGQGALAIECRGDDKDLLQLLSHINDGVTERTVSAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + + +V + +G + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLQENNEIELTALVGSVEGSVLLKETVTG--MDPEQVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|309379620|emb|CBX21791.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 326
Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKLADDG 313
Query: 301 NKNVFN 306
+ +
Sbjct: 314 ARELIG 319
>gi|167636181|ref|ZP_02394485.1| porphobilinogen deaminase [Bacillus anthracis str. A0442]
gi|170688695|ref|ZP_02879900.1| porphobilinogen deaminase [Bacillus anthracis str. A0465]
gi|254687046|ref|ZP_05150904.1| porphobilinogen deaminase [Bacillus anthracis str. CNEVA-9066]
gi|254741606|ref|ZP_05199293.1| porphobilinogen deaminase [Bacillus anthracis str. Kruger B]
gi|167528402|gb|EDR91170.1| porphobilinogen deaminase [Bacillus anthracis str. A0442]
gi|170667381|gb|EDT18139.1| porphobilinogen deaminase [Bacillus anthracis str. A0465]
Length = 309
Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|49478646|ref|YP_038514.1| porphobilinogen deaminase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|55976410|sp|Q6HD62|HEM3_BACHK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49330202|gb|AAT60848.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 309
Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG I + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|15676445|ref|NP_273584.1| porphobilinogen deaminase [Neisseria meningitidis MC58]
gi|11386833|sp|Q9K0P6|HEM3_NEIMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|7225764|gb|AAF40968.1| porphobilinogen deaminase [Neisseria meningitidis MC58]
gi|254671891|emb|CBA04160.1| Porphobilinogen deaminase [Neisseria meningitidis alpha275]
gi|308388723|gb|ADO31043.1| putative porphobilinogen deaminase [Neisseria meningitidis
alpha710]
gi|316985397|gb|EFV64345.1| porphobilinogen deaminase [Neisseria meningitidis H44/76]
gi|319409917|emb|CBY90242.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS;
pre-uroporphyrinogen synthase) [Neisseria meningitidis
WUE 2594]
gi|325127627|gb|EGC50543.1| porphobilinogen deaminase [Neisseria meningitidis N1568]
gi|325139808|gb|EGC62341.1| porphobilinogen deaminase [Neisseria meningitidis CU385]
gi|325200773|gb|ADY96228.1| porphobilinogen deaminase [Neisseria meningitidis H44/76]
Length = 311
Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|52141043|ref|YP_085787.1| porphobilinogen deaminase [Bacillus cereus E33L]
gi|61213349|sp|Q633Y0|HEM3_BACCZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51974512|gb|AAU16062.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus
cereus E33L]
Length = 309
Score = 361 bits (927), Expect = 8e-98, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|161869466|ref|YP_001598634.1| porphobilinogen deaminase [Neisseria meningitidis 053442]
gi|161595019|gb|ABX72679.1| porphobilinogen deaminase [Neisseria meningitidis 053442]
Length = 316
Score = 361 bits (927), Expect = 8e-98, Method: Composition-based stats.
Identities = 103/306 (33%), Positives = 165/306 (53%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 6 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++ R + D F+S+ L++
Sbjct: 64 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALATIGERANPFDAFVSNQYTRLEE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 124 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 184 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 244 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 303
Query: 301 NKNVFN 306
+ +
Sbjct: 304 AQELIG 309
>gi|229013679|ref|ZP_04170808.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048]
gi|229135309|ref|ZP_04264103.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196]
gi|228648132|gb|EEL04173.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196]
gi|228747601|gb|EEL97475.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048]
Length = 309
Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats.
Identities = 117/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + GN D +G +AA +
Sbjct: 240 GCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|30022552|ref|NP_834183.1| porphobilinogen deaminase [Bacillus cereus ATCC 14579]
gi|218235229|ref|YP_002369271.1| porphobilinogen deaminase [Bacillus cereus B4264]
gi|229129756|ref|ZP_04258723.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4]
gi|229152666|ref|ZP_04280854.1| Porphobilinogen deaminase [Bacillus cereus m1550]
gi|296504955|ref|YP_003666655.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171]
gi|39931461|sp|Q817R0|HEM3_BACCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740629|sp|B7HE96|HEM3_BACC4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|29898110|gb|AAP11384.1| Porphobilinogen deaminase [Bacillus cereus ATCC 14579]
gi|218163186|gb|ACK63178.1| hydroxymethylbilane synthase [Bacillus cereus B4264]
gi|228630812|gb|EEK87453.1| Porphobilinogen deaminase [Bacillus cereus m1550]
gi|228653672|gb|EEL09543.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4]
gi|296326007|gb|ADH08935.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171]
Length = 309
Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 DVITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|218767661|ref|YP_002342173.1| porphobilinogen deaminase [Neisseria meningitidis Z2491]
gi|11386831|sp|Q9JVS4|HEM3_NEIMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|121051669|emb|CAM07972.1| putative porphobilinogen deaminase [Neisseria meningitidis Z2491]
Length = 311
Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|46907786|ref|YP_014175.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093092|ref|ZP_00230869.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858]
gi|226224157|ref|YP_002758264.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria
monocytogenes Clip81459]
gi|254824385|ref|ZP_05229386.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194]
gi|254852180|ref|ZP_05241528.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503]
gi|254931496|ref|ZP_05264855.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262]
gi|254993453|ref|ZP_05275643.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-064]
gi|300764778|ref|ZP_07074768.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017]
gi|55976452|sp|Q71ZB2|HEM3_LISMF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|259647801|sp|C1KVK3|HEM3_LISMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46881055|gb|AAT04352.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018532|gb|EAL09288.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858]
gi|225876619|emb|CAS05328.1| Putative porphobilinogen deaminase (hydroxymethylbilane synthase)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|258605484|gb|EEW18092.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503]
gi|293583048|gb|EFF95080.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262]
gi|293593620|gb|EFG01381.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194]
gi|300514454|gb|EFK41511.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017]
gi|328465591|gb|EGF36820.1| porphobilinogen deaminase [Listeria monocytogenes 1816]
gi|332311998|gb|EGJ25093.1| Porphobilinogen deaminase [Listeria monocytogenes str. Scott A]
Length = 309
Score = 361 bits (926), Expect = 9e-98, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA ++F G+V +DG I + G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|304388235|ref|ZP_07370355.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091]
gi|304337762|gb|EFM03911.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091]
Length = 311
Score = 361 bits (926), Expect = 9e-98, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|83855078|ref|ZP_00948608.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1]
gi|83842921|gb|EAP82088.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1]
Length = 317
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 131/305 (42%), Positives = 177/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG
Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA
Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL +
Sbjct: 129 ESAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG
Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G TL+ G VL DG R+G +G D AQ + +
Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|323189475|gb|EFZ74755.1| porphobilinogen deaminase [Escherichia coli RN587/1]
Length = 286
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 100/272 (36%), Positives = 150/272 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276
>gi|228993205|ref|ZP_04153126.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442]
gi|228999254|ref|ZP_04158834.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17]
gi|229006801|ref|ZP_04164434.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4]
gi|228754423|gb|EEM03835.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4]
gi|228760451|gb|EEM09417.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17]
gi|228766531|gb|EEM15173.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442]
Length = 309
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 162/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L+ EID AVHS KDMP L GL I R D RD FIS +S +DLA
Sbjct: 60 FVKEIEHALLMKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFEDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 DVITEHLDETLCVPAVGQGALAIECREDDADLLQLLSHMNDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A K + +V + DG + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLQKNDEIELTALVGSMDGSVLLKEIVTG--VNPEQVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|229163420|ref|ZP_04291371.1| Porphobilinogen deaminase [Bacillus cereus R309803]
gi|228619989|gb|EEK76864.1| Porphobilinogen deaminase [Bacillus cereus R309803]
Length = 309
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 168/304 (55%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS +S KDLA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGESFKDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHMNDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D + +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVAGT--DPVEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|229169206|ref|ZP_04296920.1| Porphobilinogen deaminase [Bacillus cereus AH621]
gi|228614272|gb|EEK71383.1| Porphobilinogen deaminase [Bacillus cereus AH621]
Length = 309
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 117/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLMIGCTPKRVDPRDAFISKNGESFKDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + GN D +G +AA +
Sbjct: 240 GCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|304407492|ref|ZP_07389144.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9]
gi|304343443|gb|EFM09285.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9]
Length = 325
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 110/314 (35%), Positives = 164/314 (52%), Gaps = 15/314 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ R+GTR S LAL + L ++ H +P + + + TKGDRI + TL+++GG
Sbjct: 10 RVIRVGTRQSALALTQTGQVIEQLKELSERHGLP-YTFETVKIVTKGDRILDVTLSKVGG 68
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ GEID AVHS KDMP +L +GL + R D RDV I+
Sbjct: 69 KGLFVKEIEQALLDGEIDLAVHSMKDMPYELPEGLMNGSVPKRVDPRDVLITADGGGFDA 128
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + L R DI ++ RG I++RL KL + AI+LA AG+ R+
Sbjct: 129 LPNGAKVGTSSLRRASQLKNRRPDIEIVSIRGNIDSRLKKLETEQFDAIVLAAAGMTRMG 188
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L ++ P+ GQGA+ IE + + L+ ++N + +V ER+FL L
Sbjct: 189 WENRISSPLPVDICVPAVGQGALGIECREADSDVRYLLSLLNDPISELAVRAERSFLGAL 248
Query: 241 DGSCKSAIAGFAYC---------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
+G C+ I A +G+ + GIV + DG+I + G D +G
Sbjct: 249 NGGCQIPIGAHATVAIPEGASNLEGALIELVGIVGSPDGEILLK--EIGKGTDPEALGLS 306
Query: 292 AAQYIRFISNKNVF 305
A +R +
Sbjct: 307 VAAALRANGADQIL 320
>gi|255635113|gb|ACU17914.1| unknown [Glycine max]
Length = 350
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 138/306 (45%), Positives = 190/306 (62%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 43 LRIGTRGSPLALAQAYETRDKLMASHAELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + LPRED+RD FIS +A SL DL
Sbjct: 103 FTKEIDEALINGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GT+SLRRK+ +L ++V + FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 163 GSIVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G
Sbjct: 223 ENVTSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 283 SCRTPIAGYASRNEDGNCLFRGLVASPDGIRVLETSRIGPYAFEDTIKMGKDAGEELLSR 342
Query: 300 SNKNVF 305
+ F
Sbjct: 343 AGPGFF 348
>gi|224081346|ref|XP_002306378.1| predicted protein [Populus trichocarpa]
gi|222855827|gb|EEE93374.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 138/307 (44%), Positives = 188/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H + I I+ + T GD+I ++ L +IGGKGL
Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHAELAEDGAIQIVIIKTTGDKILSQPLADIGGKGL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEMTILPCNLPREDVRDAFISMSATSLADLPA 175
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GT+SLRRK+ +L +SV + FRG ++TRL KLN A LLA AG+KRL
Sbjct: 176 GSIVGTASLRRKSQILHRFPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL I+D P+ QGAI I ++ K + +NHE+T +V CERAFL LDG
Sbjct: 236 ENVTSILPIDDMLPAVAQGAIGIACRDSDDKMANYLASLNHEETRLAVACERAFLETLDG 295
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG + SR G D I +G+DA + +
Sbjct: 296 SCRTPIAGYARRDENGDCIFKGLVASPDGTRVLKTSRKGPYAFDDMIAMGKDAGKELLSQ 355
Query: 300 SNKNVFN 306
+ F+
Sbjct: 356 AGPGFFD 362
>gi|30264532|ref|NP_846909.1| porphobilinogen deaminase [Bacillus anthracis str. Ames]
gi|47529995|ref|YP_021344.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187356|ref|YP_030608.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne]
gi|65321833|ref|ZP_00394792.1| COG0181: Porphobilinogen deaminase [Bacillus anthracis str. A2012]
gi|165871949|ref|ZP_02216590.1| porphobilinogen deaminase [Bacillus anthracis str. A0488]
gi|167640713|ref|ZP_02398973.1| porphobilinogen deaminase [Bacillus anthracis str. A0193]
gi|170708352|ref|ZP_02898796.1| porphobilinogen deaminase [Bacillus anthracis str. A0389]
gi|177653999|ref|ZP_02936040.1| porphobilinogen deaminase [Bacillus anthracis str. A0174]
gi|190566915|ref|ZP_03019831.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I]
gi|227817244|ref|YP_002817253.1| porphobilinogen deaminase [Bacillus anthracis str. CDC 684]
gi|229601857|ref|YP_002868748.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248]
gi|254736568|ref|ZP_05194274.1| porphobilinogen deaminase [Bacillus anthracis str. Western North
America USA6153]
gi|254754796|ref|ZP_05206831.1| porphobilinogen deaminase [Bacillus anthracis str. Vollum]
gi|254757628|ref|ZP_05209655.1| porphobilinogen deaminase [Bacillus anthracis str. Australia 94]
gi|39931467|sp|Q81LC7|HEM3_BACAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800231|sp|C3P9E9|HEM3_BACAA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800232|sp|C3L6Z5|HEM3_BACAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30259190|gb|AAP28395.1| hydroxymethylbilane synthase [Bacillus anthracis str. Ames]
gi|47505143|gb|AAT33819.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181283|gb|AAT56659.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne]
gi|164712239|gb|EDR17775.1| porphobilinogen deaminase [Bacillus anthracis str. A0488]
gi|167511285|gb|EDR86671.1| porphobilinogen deaminase [Bacillus anthracis str. A0193]
gi|170126727|gb|EDS95610.1| porphobilinogen deaminase [Bacillus anthracis str. A0389]
gi|172081054|gb|EDT66132.1| porphobilinogen deaminase [Bacillus anthracis str. A0174]
gi|190561906|gb|EDV15875.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I]
gi|227006938|gb|ACP16681.1| hydroxymethylbilane synthase [Bacillus anthracis str. CDC 684]
gi|229266265|gb|ACQ47902.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248]
Length = 309
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|229111935|ref|ZP_04241479.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15]
gi|228671499|gb|EEL26799.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15]
Length = 309
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEEYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|88807654|ref|ZP_01123166.1| porphobilinogen deaminase [Synechococcus sp. WH 7805]
gi|88788868|gb|EAR20023.1| porphobilinogen deaminase [Synechococcus sp. WH 7805]
Length = 317
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 157/309 (50%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELESAH--PGMAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNADHT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL
Sbjct: 179 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + G L G+V + DG R G+ D IGR A ++
Sbjct: 239 RELEGGCQVPIGVNSRIDGQELILTGMVASLDGLRLIRDERRGSLTDPEAIGRALAADLK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 SRGAGEILQ 307
>gi|332089030|gb|EGI94141.1| porphobilinogen deaminase [Shigella boydii 3594-74]
Length = 287
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 99/272 (36%), Positives = 149/272 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 277
>gi|297537269|ref|YP_003673038.1| porphobilinogen deaminase [Methylotenera sp. 301]
gi|297256616|gb|ADI28461.1| porphobilinogen deaminase [Methylotenera sp. 301]
Length = 319
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 165/301 (54%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R SPLA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGLF
Sbjct: 14 KLVIASRESPLAMWQALHIQSRLQALY--PSTIVEILGMTTTGDQILDTPLAKVGGKGLF 71
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A RED RD F+S+ SL+DL
Sbjct: 72 VKELETALEDGRADLAVHSMKDVPMNLPEGFMMAATGEREDPRDAFVSNDFNSLEDLPEG 131
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 132 SIVGTSSLRRQSQLQARLPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLSAR 191
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +++ E P+ GQGA+ IE + N P ++ +NH DT V ERA L GSC
Sbjct: 192 IRNVISPELSIPAVGQGALGIEINANRPDLLAVLAPLNHPDTQVCVEAERAMSRALAGSC 251
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A CKG + G V + DGK + NGNR A +G+ A + ++
Sbjct: 252 TVPLGAYATCKGEEISITGFVASVDGKQMLIETANGNRNQADALGKALANQLLAKGANDI 311
Query: 305 F 305
Sbjct: 312 L 312
>gi|167463591|ref|ZP_02328680.1| porphobilinogen deaminase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383221|ref|ZP_08057032.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321152490|gb|EFX45276.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 314
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 115/309 (37%), Positives = 167/309 (54%), Gaps = 9/309 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGK 61
+ +GTR S LAL + L + I + TKGDRI + TL+++GGK
Sbjct: 2 RKIVVGTRQSALALTQTGQVVDELRKRCREAGLQVEFEIRKIVTKGDRILDVTLSKVGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ +++GEID AVHS KDMP +L +GL I A R+D RD ++ SL +L
Sbjct: 62 GLFVKEIEQAMLNGEIDLAVHSMKDMPFELPEGLVIGAIPERQDPRDCILTKGYVSLDEL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR + LL R D+++ RG I++RL KL + AI+LA AG+ R+
Sbjct: 122 PQGALVGTSSLRRGSQLLHARPDLTIRSVRGNIDSRLRKLESEGFDAIVLASAGLHRMGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I L E P+ GQGA+CIE + +L+K+I H+DT +V ERAFL L+
Sbjct: 182 EERISGYLPPEQCLPAVGQGALCIECRGGDAFVLDLLKLIQHDDTALAVRAERAFLGRLN 241
Query: 242 GSCKSAIAGFAYCK--GST---LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ + FA G T L +V + DG + +R G R +G A +
Sbjct: 242 GGCQVPLGAFASVDHSGGTEPLLTLTAMVGSPDGSKLLKETRQGTR--PEELGLQLADAL 299
Query: 297 RFISNKNVF 305
+
Sbjct: 300 IGRGADRIL 308
>gi|312114941|ref|YP_004012537.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100]
gi|311220070|gb|ADP71438.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100]
Length = 313
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 129/303 (42%), Positives = 188/303 (62%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LALA A E ++ L ++ + + T GD+I ++ L+ +GGKGL
Sbjct: 8 RQIRIGTRGSALALAQATEVQNRLAAIYGD-EVKFERVVIKTTGDKILDKALSLVGGKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ L + +ID AVHS KD+ L GL+I+ LPRED+RD FIS A+SL D+
Sbjct: 67 FTKELEEALFADQIDIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAKSLADMPE 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+VIGT+S+RR+A + R D+ + FRG +++RL KL + A A LLA AG+ RL
Sbjct: 127 GAVIGTASVRREAFIKNKRPDLKTVLFRGNVQSRLKKLEDGVADATLLASAGLNRLGLSD 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +ED P+P QGAI IE N+ +EL+ ++ E T +++ ERAFL+ELDGS
Sbjct: 187 RITQHIPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAFLSELDGS 246
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C++ IA A G + F G +L DG +E +R G+ DA +G+DAAQ + K
Sbjct: 247 CRTPIAALARYDGHGRVSFKGAILTPDGARIYETTREGSANDAAAMGKDAAQELYARGGK 306
Query: 303 NVF 305
+VF
Sbjct: 307 DVF 309
>gi|155967344|gb|ABU41508.1| HemC [Heliophilum fasciatum]
Length = 315
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P IGTR S LAL L + P I + TKGD+I + L +IG KG
Sbjct: 5 NRPIVIGTRDSALALWQTHWVLEQLQA--RFPEQRFEIKAIKTKGDKILDVALAKIGDKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GE+D AVHS KD+PT+L +GL + A RED RDV I TA++L +L
Sbjct: 63 LFTKELEVAMLEGEVDMAVHSLKDLPTQLPEGLTVGAMCIREDYRDVLIGRTARTLAELK 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRK+ + + R D+ ++D RG ++TR+ K+ I+LA AG+ RL
Sbjct: 123 PGARVGTASLRRKSQIWKVRPDLELLDIRGNLQTRMRKMEEQDLDGIILAAAGVLRLGWA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + ++ + P+ GQG++ IE + +V +NH+DT D + ERA + L+G
Sbjct: 183 DKITQYIDEDVCLPAVGQGSVGIEIRDGDEAIARVVGALNHKDTADCITAERALMRTLEG 242
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I + +L +G+V + DG+ G+R +A ++G A +
Sbjct: 243 GCQVPIGALGKLGEDDSLTLHGVVASLDGREICRDQVTGHRSEAADLGHRLADILIAKGA 302
Query: 302 KNVF 305
+
Sbjct: 303 AEIL 306
>gi|90421073|ref|ZP_01228976.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1]
gi|90334708|gb|EAS48485.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1]
Length = 311
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 141/307 (45%), Positives = 190/307 (61%), Gaps = 1/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LA A A E R+ LM H +P I +ST GDRI +R L+E+GG
Sbjct: 1 MASDIIRIGTRGSQLAKAQASEVRARLMAAHDLPEEAFEIEVISTTGDRILDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE LI G +D A HS+KDM T +GL++SAYLPRED+RD FI TA ++ +
Sbjct: 61 KGLFTKEIEAALIDGRVDIAAHSSKDMATASPEGLEVSAYLPREDVRDAFIGRTAATIDE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IG++SLRR++LL R R D+ VI FRG +++RL KL + A LLA AG+ R+
Sbjct: 121 LPHGATIGSASLRRQSLLKRMRPDLKVITFRGNVQSRLRKLEEGQVDATLLALAGLNRMA 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V EIL +E F P+PGQGAICI+ + + + LV I T ++ ERAFLAEL
Sbjct: 181 MQDVATEILEVERFLPAPGQGAICIQNRIGDERVHGLVAAIADPRTTVALTAERAFLAEL 240
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DGSC++ IA A + T+ +G++L DG HE R G DA +GR A + +
Sbjct: 241 DGSCRTPIAAHAVLAEDGTVTLHGMILTPDGSRMHETRRTGIAADAEALGRLAGRDVLDA 300
Query: 300 SNKNVFN 306
+ F+
Sbjct: 301 AGPGFFD 307
>gi|269215203|ref|ZP_05987933.2| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970]
gi|269208048|gb|EEZ74503.1| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970]
Length = 326
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKLADDG 313
Query: 301 NKNVFN 306
+ +
Sbjct: 314 ARELIG 319
>gi|255521282|ref|ZP_05388519.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-175]
Length = 309
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVINPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA ++F G+V +DG I + G + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|289434836|ref|YP_003464708.1| hypothetical protein lse_1471 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171080|emb|CBH27622.1| hemC [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 309
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T +S DL
Sbjct: 60 LFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVESFHDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R+
Sbjct: 120 TAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA + F G+V +DG R G + + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTG--ENPMTIGNQVAEALLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|75759963|ref|ZP_00740032.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228902993|ref|ZP_04067133.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222]
gi|74492560|gb|EAO55707.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228856669|gb|EEN01189.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222]
Length = 309
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHRLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + T+ +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|42783601|ref|NP_980848.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987]
gi|55976457|sp|Q72ZW2|HEM3_BACC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|42739530|gb|AAS43456.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987]
Length = 309
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|323173419|gb|EFZ59048.1| porphobilinogen deaminase [Escherichia coli LT-68]
Length = 286
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 98/272 (36%), Positives = 149/272 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G +A +G A+ + + +
Sbjct: 245 IRGERRGAPQNAEQMGISLAEELLNNGAREIL 276
>gi|254511195|ref|ZP_05123262.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11]
gi|221534906|gb|EEE37894.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11]
Length = 318
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 126/307 (41%), Positives = 176/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L +P I+ + T GD +R L E+G
Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLSTAFDLPEDAFEIVVIKTTGDNRAMIDADRPLKEVGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ GEID AVHS KDMP +GL + +LPRED+RD FIS S+ D
Sbjct: 71 KGLFTKEIEEAMLKGEIDIAVHSTKDMPVAQPQGLVLDTFLPREDVRDAFISPGLNSIHD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG++RL+
Sbjct: 131 LPRGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLKKLADGVADCTFLAMAGLRRLE 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V ++ +D P+ QGAI IE ++ +A ++ I+H +T + ER+ LA L
Sbjct: 191 MADVPATAISPDDMLPAIAQGAIGIERRNDDSRAAGMLAAIHHPETAQRLAAERSLLAGL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A + L G VL DG G +G+ A + +
Sbjct: 251 DGSCETPIAGLAEIRDGQLRLRGEVLRPDGTESIHEEAFGPVESGAKMGQAMADTLLKKA 310
Query: 301 NKNVFNF 307
N F++
Sbjct: 311 GPNFFDW 317
>gi|229147034|ref|ZP_04275394.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24]
gi|228636422|gb|EEK92892.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24]
Length = 309
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|218899632|ref|YP_002448043.1| porphobilinogen deaminase [Bacillus cereus G9842]
gi|228967567|ref|ZP_04128593.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|226740628|sp|B7IIX5|HEM3_BACC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218545857|gb|ACK98251.1| porphobilinogen deaminase [Bacillus cereus G9842]
gi|228792146|gb|EEM39722.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 309
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + T+ +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|110678608|ref|YP_681615.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114]
gi|109454724|gb|ABG30929.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114]
Length = 314
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 136/303 (44%), Positives = 182/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLA+A AFETR+ LM +P + I+ + GD I +R L +IGGKGLF
Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPENAFTIVVIKVTGDMIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD FIS T + + DLA
Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLILDTYLPREDVRDAFISPTLKGIADLAQG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V
Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLACAGLSRLKMDEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + P+ QGAI IE + + EL+ I+ T + ER FL LDGSC
Sbjct: 191 PATPIETDHMLPAVAQGAIGIERRIADTNTAELLSAIHDGPTGQRLAAERNFLLTLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G L G VL DG R+G D +GRD A+ + + +
Sbjct: 251 ETPIAGLAELSGDHLRLRGEVLRPDGSEALNGERSGPISDGAAMGRDLAEKLLKRAGPSF 310
Query: 305 FNF 307
F++
Sbjct: 311 FDW 313
>gi|229019689|ref|ZP_04176496.1| Porphobilinogen deaminase [Bacillus cereus AH1273]
gi|229025928|ref|ZP_04182320.1| Porphobilinogen deaminase [Bacillus cereus AH1272]
gi|228735374|gb|EEL85977.1| Porphobilinogen deaminase [Bacillus cereus AH1272]
gi|228741596|gb|EEL91789.1| Porphobilinogen deaminase [Bacillus cereus AH1273]
Length = 309
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLKEDDAIELTALVGSMDGSVLLKETVVGT--DPKQVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|298527685|ref|ZP_07015089.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511337|gb|EFI35239.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 313
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 106/302 (35%), Positives = 161/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A S L + + + ++ + T GD+I + L ++GGKGL
Sbjct: 2 KKVVIATRGSKLALWQAEHISSRLRERYS--GLEVELLKVKTTGDKILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G D AVHS KDMP +L +GL++ RE DV +S + + L
Sbjct: 60 FVKEIEEALMDGRADIAVHSMKDMPAELPRGLKLGIIPERESRFDVLLSTSYPDISSLPT 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A +L R D+ + RG ++TRL KL AI++A AG+ RL
Sbjct: 120 GATVGTSSLRRQAQILHMRPDLEIQMLRGNLDTRLRKLKEGIYDAIIVAAAGMSRLNMHA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L+ F P+ GQGA+ IE + + EL+ ++ T + CERAFLAEL+G
Sbjct: 180 DYVTELSPPYFLPAVGQGALGIEYLQDRQELDELLGFMDDFSTRYCIECERAFLAELEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA + +G+ + G+V G+ S +G DA ++G D A+ + +
Sbjct: 240 CQVPIACYCRHEGNNIQATGLVCDLKGERMIRKSVSGKPKDARSLGVDMARQVLEAGGRE 299
Query: 304 VF 305
+
Sbjct: 300 IL 301
>gi|296080867|emb|CBI18797.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 138/307 (44%), Positives = 187/307 (60%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL
Sbjct: 21 VRIGTRGSPLALAQAYETRDKLMAAHSELAEEGAIQIVVIKTTGDKILTQPLADIGGKGL 80
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ L++G+ID AVHS KD+PT L + LPRED+RD FIS TA SL +L
Sbjct: 81 FTKEIDEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLSELPA 140
Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GT+SLRRK+ LL ++V++ FRG ++TRL KLN A LLA AG+KRL
Sbjct: 141 GSIVGTASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 200
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I++ P+ QGAI I N+ K + +NHE T +V CERAFL LDG
Sbjct: 201 ENVTSILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLNHEVTRLAVACERAFLETLDG 260
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 261 SCRTPIAGYASHDEDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSR 320
Query: 300 SNKNVFN 306
+ F+
Sbjct: 321 AGPGFFD 327
>gi|229175146|ref|ZP_04302662.1| Porphobilinogen deaminase [Bacillus cereus MM3]
gi|228608282|gb|EEK65588.1| Porphobilinogen deaminase [Bacillus cereus MM3]
Length = 309
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDTVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG I + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--NPEEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|108761567|ref|YP_630875.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622]
gi|123374611|sp|Q1D8Z8|HEM3_MYXXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108465447|gb|ABF90632.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622]
Length = 314
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 108/300 (36%), Positives = 159/300 (53%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++ ++T+GDR + L+ +GGKGLF
Sbjct: 5 VRIATRQSPLALWQARHVGALLTSRH--PGLEVTLVEMTTEGDRFLSAPLSAVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G D AVHS KDM + +GL ++A RED RDVF +L L +
Sbjct: 63 KEIEQALLDGRADIAVHSLKDMTSVFPEGLILAAVPEREDPRDVFCGLGGLTLDTLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR +L R D+ ++ RG ++TRL + LLAYAG+KRL E VI
Sbjct: 123 RVGTSSLRRSCILRSRRPDVDIVSVRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L E P+ GQG + I+ ++ + + L+ + H T +V ERA LA+L+G C
Sbjct: 183 TQVLPPEVSLPAVGQGVLAIQCRTDDARVRALLVPLEHATTRIAVTAERALLAKLEGGCT 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+AG+A G T++ G+V DG G A +G A + ++
Sbjct: 243 VPLAGYATVSGDTVFLRGLVGRPDGTHVVRGEVRGPVSQAHALGESLADDLLSRGAADIL 302
>gi|324328367|gb|ADY23627.1| porphobilinogen deaminase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 309
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLINQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|332750972|gb|EGJ81377.1| porphobilinogen deaminase [Shigella flexneri 4343-70]
gi|332751059|gb|EGJ81463.1| porphobilinogen deaminase [Shigella flexneri K-671]
Length = 286
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 99/272 (36%), Positives = 149/272 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276
>gi|228941631|ref|ZP_04104178.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974560|ref|ZP_04135126.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981155|ref|ZP_04141455.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407]
gi|228778355|gb|EEM26622.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407]
gi|228784963|gb|EEM32976.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817843|gb|EEM63921.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942243|gb|AEA18139.1| porphobilinogen deaminase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 309
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDEALCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|163733941|ref|ZP_02141383.1| porphobilinogen deaminase [Roseobacter litoralis Och 149]
gi|161393052|gb|EDQ17379.1| porphobilinogen deaminase [Roseobacter litoralis Och 149]
Length = 314
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 135/303 (44%), Positives = 181/303 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLA+A AFETR+ LM +P I+ + GD I +R L +IGGKGLF
Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPEDAFSIVVIKVTGDMIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD F+S T + DLA
Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLVLDTYLPREDVRDAFVSPTLSGIADLAQG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V
Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLASAGLNRLKMDEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ ++ P+ QGAI IE + + +L+ I+H +T + ER+FL LDGSC
Sbjct: 191 PATPIEADEMLPAVAQGAIGIERRMADQNTADLLSAIHHIETGQRLTAERSFLLTLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G L G VL DG R+G D +GR AQ + +
Sbjct: 251 ETPIAGLAELDGDQLRLRGEVLRPDGSESLAGERSGPIADGAEMGRILAQELLDRAGPKF 310
Query: 305 FNF 307
F +
Sbjct: 311 FEW 313
>gi|119357593|ref|YP_912237.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266]
gi|158512603|sp|A1BHD6|HEM3_CHLPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119354942|gb|ABL65813.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266]
Length = 313
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 120/307 (39%), Positives = 176/307 (57%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L + P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAELSRHY--PELDITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS + ++L +L
Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISRSGETLLNLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RLK
Sbjct: 120 QNARIATSSLRRMSQLLSMRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLKFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G
Sbjct: 180 DRISEILPHDVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIRF 298
C+ I +A K TL V + +GKI E+++ G + A G + A+ +
Sbjct: 240 GCQIPIGAYASFKNGTLKLLAFVGSVNGKIGLRNEITKTGLVSPEQAEEAGIELAKELLK 299
Query: 299 ISNKNVF 305
+
Sbjct: 300 QGADEIL 306
>gi|228923217|ref|ZP_04086507.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836423|gb|EEM81774.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 309
Score = 359 bits (923), Expect = 3e-97, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A K + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTKNDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKRGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|283851270|ref|ZP_06368553.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B]
gi|283573439|gb|EFC21416.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B]
Length = 310
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 162/304 (53%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ I TR S LAL A + L + + P + ++P+ TKGD+I + L ++GGKG
Sbjct: 2 REKLVIATRSSKLALWQANHVSARLRETY--PGLVVDLLPIKTKGDKILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P + +GL + RED D +S L
Sbjct: 60 LFVKEIEEALLDGRADLAVHSMKDVPAEQPQGLVVGIVPEREDPCDTLLSVAYAGFAALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRKA L+ R D+S+ID RG ++TR+ KL + AI++A AG+ RL
Sbjct: 120 AGARVGTSSLRRKAQLMALRPDLSIIDLRGNLDTRVGKLLDGLFDAIVVATAGLNRLGLT 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L +F P+ QGA+ +E ++P+ ++ +H ++ D+V ER FLA L+G
Sbjct: 180 APQAVRLGPPEFLPAAAQGALGLEYRTDDPETAAMLAFFDHPESRDAVAAERGFLARLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA A G L G+V + + G R +A +G+ A+ + + K
Sbjct: 240 GCQVPIAAHATIDGDALALDGLVADPETGQTFRGNVTGKRSEARALGQGLAESVLAMGAK 299
Query: 303 NVFN 306
V
Sbjct: 300 AVLE 303
>gi|71064670|ref|YP_263397.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4]
gi|71037655|gb|AAZ17963.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4]
Length = 345
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 104/330 (31%), Positives = 169/330 (51%), Gaps = 31/330 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR SPLAL A R L+ ++ P I ++ + TKGD+I + L +IGGKGLF
Sbjct: 11 TLNIATRQSPLALWQAEHIRDRLLVLY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L
Sbjct: 69 VKELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIDELPQG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT+SLRR+ + +R+D+ + RG + TRL+KL+ + AI+LA +G++RL+
Sbjct: 129 AVVGTASLRRQCQIKAYRADLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLQRLELNAR 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L+I+ P+ GQGA+ IE ++ + +L+ +N + + ERA L G C
Sbjct: 189 IRSELDIDICLPAVGQGALAIECRADDDEVLKLLAPLNDDKARIRLIAERALNRHLQGGC 248
Query: 245 KSAIAGFAYCK---------------------GSTLYFYGIVLASDGKIFHEVSR----N 279
+ IA +A + G TL+ G V DG +V +
Sbjct: 249 QVPIAAYAVLQKADALAADNDDNGSVSNNNDAGDTLWLRGRVGQEDGSELLKVEKRQTLT 308
Query: 280 GNRCD----AINIGRDAAQYIRFISNKNVF 305
G++ + A +G + A+ + +
Sbjct: 309 GSQAEQEAQANQLGIEVAEMLLEAGAGAIL 338
>gi|226326699|ref|ZP_03802217.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198]
gi|225204920|gb|EEG87274.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198]
Length = 291
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 104/278 (37%), Positives = 153/278 (55%), Gaps = 2/278 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQLTH--PGLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+ +L++
Sbjct: 59 KGLFVKELELALLESRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYNALEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLKAQRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ I +N+ + + L +NH T V +RA L
Sbjct: 179 LNERIRTPLSAEQSLPAVGQGAVGIGRQLNDNETRHLFDALNHSPTAILVKIKRAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
+G C+ I +A + + F +V + DG+
Sbjct: 239 EGGCQVPIGTYAIWQDDKILFGALVGSPDGENIFRGEL 276
>gi|228954747|ref|ZP_04116769.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229071973|ref|ZP_04205183.1| Porphobilinogen deaminase [Bacillus cereus F65185]
gi|229081729|ref|ZP_04214222.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2]
gi|229180740|ref|ZP_04308078.1| Porphobilinogen deaminase [Bacillus cereus 172560W]
gi|228602718|gb|EEK60201.1| Porphobilinogen deaminase [Bacillus cereus 172560W]
gi|228701574|gb|EEL54067.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2]
gi|228711132|gb|EEL63097.1| Porphobilinogen deaminase [Bacillus cereus F65185]
gi|228804945|gb|EEM51542.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 309
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDEALCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|88770654|gb|ABD51930.1| chloroplast hydroxymethylbilane synthase [Guillardia theta]
Length = 346
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 125/310 (40%), Positives = 187/310 (60%), Gaps = 5/310 (1%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTL 55
M +P ++GTR SPLALA A+ETR L ++ + I ++T GD ++ L
Sbjct: 13 MSGEPVIKLGTRGSPLALAQAYETRRRLAELFPEELGEKGEKVSINIINTSGDMELSKAL 72
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
+EIGGKGLFT+E++ L+ E+D VHS KD+PT L G + A LPRED RD FIS
Sbjct: 73 SEIGGKGLFTKELDVALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISPKY 132
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
QS +++ +VIG++SLRR+A + I ++FRG ++TRL KL++ A LLA AG
Sbjct: 133 QSFEEMPEGTVIGSASLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLALAG 192
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KR+ + ++L+ ++ P+ QGAI I+ ++ K + + +NH+DT V+CER+
Sbjct: 193 LKRMNMADCVTKVLDWDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCERS 252
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
FLA LDGSCK+ IAG A ++F G+V + DG R G+ D + IG+DA +
Sbjct: 253 FLATLDGSCKTPIAGQARIIDGKIHFRGLVASPDGSKIFRAERVGDVSDYMKIGKDAGEE 312
Query: 296 IRFISNKNVF 305
IR + + F
Sbjct: 313 IRKEAGEQFF 322
>gi|313633107|gb|EFS00005.1| porphobilinogen deaminase [Listeria seeligeri FSL N1-067]
Length = 309
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 168/306 (54%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T S DL
Sbjct: 60 LFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVGSFHDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R+
Sbjct: 120 TAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL +
Sbjct: 180 ENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKK 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAGFA + F G+V +DG R G + + IG A+ +
Sbjct: 240 LNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTG--ENPMTIGNQVAEALLSE 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GADTII 303
>gi|304436298|ref|ZP_07396276.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370703|gb|EFM24350.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 311
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A ++ H P + + L+TKGDRI + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQANYVAEAIKKEH--PSCCVELRELTTKGDRILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ ++ +D AVHS KDMPT++ GL I A R D D F+S +++D
Sbjct: 59 KGLFTKELEQAMLDDAVDLAVHSLKDMPTEIPDGLVIGAITTRLDPGDAFVSAHYAAVED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GTSSLRR+A LL R D+++ D RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPVGARVGTSSLRRRAQLLAVRPDLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ IL P+ GQGA+ IE + ++ + + ERAFL +
Sbjct: 179 FERRIRTILPRSVMLPAVGQGALAIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRV 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A + ++ + DG+ +G A +G A+ +
Sbjct: 239 EGGCQIPVGVYAEVDANGQISIDAMIASVDGQRICRSDAHGAGEQAEALGTALAEELLDA 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GGREIL 304
>gi|155241760|gb|ABT18042.1| porphobilinogen deaminase [Heliobacillus mobilis]
Length = 314
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 162/305 (53%), Gaps = 3/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL + L ++ P + + TKGD+I + L +IG KG
Sbjct: 5 QRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKIGDKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L L
Sbjct: 63 LFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHG-GLDALP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ RL
Sbjct: 122 QGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRLGWA 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + ++ P+ GQG+I IE + + ++V +NH +T S+ ERA + L+G
Sbjct: 182 EKISQYIPVDMCLPAVGQGSIGIEIREGDDEIAKIVGALNHYETSVSIRAERALMRTLEG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + L GIV + DGK G+ +G A+ + +
Sbjct: 242 GCQVPIGSLGRLQEGRLVLDGIVASLDGKHVARGREEGDPSQPEEVGIRLAEQLLQQGAR 301
Query: 303 NVFNF 307
+ N
Sbjct: 302 EILNV 306
>gi|255070965|ref|XP_002507564.1| hydroxymethylbilane synthase [Micromonas sp. RCC299]
gi|226522839|gb|ACO68822.1| hydroxymethylbilane synthase [Micromonas sp. RCC299]
Length = 353
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 122/304 (40%), Positives = 177/304 (58%), Gaps = 4/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
+IGTR SPLALA A+ TR L ++ + I + T GD++ ++ L +IGGKGL
Sbjct: 40 IKIGTRGSPLALAQAYMTRDLLKASFPELGNDGALEICIIKTTGDKVLDQPLADIGGKGL 99
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L
Sbjct: 100 FTRELDVALLDGRIDIAVHSMKDVPTYLPEGTILPCMLPREDVRDAFISVKYDDLSELPE 159
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ +
Sbjct: 160 GSLVGTASLRRQSQLLARFPGLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMTQ 219
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+IL+++ P+ QGAI I + K ++ +NHE+T +V CER+FLA LDGS
Sbjct: 220 HATKILDVDVMLPAVAQGAIGIACRTGDSKQITYLESLNHEETRIAVECERSFLAALDGS 279
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301
C++ IAGFA G L F G+V A DG E SR + DAI G++A ++ +
Sbjct: 280 CRTPIAGFARKDGDNLRFNGLVAALDGSEILETSRVTKWSYADAIAAGKEAGAELKKKAP 339
Query: 302 KNVF 305
F
Sbjct: 340 AEFF 343
>gi|78357663|ref|YP_389112.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123741224|sp|Q30Y29|HEM3_DESDG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78220068|gb|ABB39417.1| hydroxymethylbilane synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 316
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 2/304 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A + +M + + ++ L TKGD I + L ++GGKGL
Sbjct: 2 KKIVIATRGSKLALWQAEHIKERIMQQYPD-SFEVELLVLKTKGDIILDVPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G D AVHS KD+P +L +GL + A RE D +S L L
Sbjct: 61 FVKEIEEALLDGRADIAVHSMKDVPMELPQGLTLGAIPEREVPTDSLLSARYDGLDALPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR++ +L R D+ V RG ++TR+ KL + + AI++A +G+KRL +
Sbjct: 121 GAVVGTSSLRRQSQILAMRPDLEVKWLRGNVQTRIRKLMDGEYDAIIMATSGLKRLGETA 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L F P+ GQGA+ +E + E++ ++H + V ER FL L G
Sbjct: 181 PFHSELGPPLFMPAVGQGALGLEYRSDRQDLAEMLAFLDHRPSRICVEAERGFLFGLQGG 240
Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A G G+V DG + G DA + G A ++
Sbjct: 241 CQVPIAGYAVMTGDNSFELTGLVAELDGTAVIRRTAAGTEADARDTGLTLAAQVKAAGAD 300
Query: 303 NVFN 306
+
Sbjct: 301 AILQ 304
>gi|309784521|ref|ZP_07679159.1| porphobilinogen deaminase [Shigella dysenteriae 1617]
gi|308927627|gb|EFP73096.1| porphobilinogen deaminase [Shigella dysenteriae 1617]
Length = 286
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 99/272 (36%), Positives = 149/272 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLVALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276
>gi|254466587|ref|ZP_05079998.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I]
gi|206687495|gb|EDZ47977.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I]
Length = 323
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 137/307 (44%), Positives = 181/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETRS L +P I+ + T GD ++ L E+GG
Sbjct: 15 PLKIGTRGSPLALAQAYETRSRLAAAFDLPQEAFEIVVIRTTGDNQALIAADKPLKELGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD FIS +SL D
Sbjct: 75 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLALDTYLPREDVRDAFISPALKSLHD 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL+ A LA AG+ RL
Sbjct: 135 LAEGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVADCTFLAMAGLNRLA 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ +A E++ I+ +T + ERAFLA L
Sbjct: 195 MADVPANPIETSDMLPAVAQGAIGIERRADDGRAAEMLAAIHDGETGLRLAAERAFLAAL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A GSTL G VL DG + D +GR+ A + +
Sbjct: 255 DGSCETPIAGLAELHGSTLRLRGEVLRPDGSESISDDQTCPVEDGAELGREMAAKLLEKA 314
Query: 301 NKNVFNF 307
K F++
Sbjct: 315 GKGFFDW 321
>gi|149181766|ref|ZP_01860257.1| porphobilinogen deaminase [Bacillus sp. SG-1]
gi|148850507|gb|EDL64666.1| porphobilinogen deaminase [Bacillus sp. SG-1]
Length = 310
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL S L ++ + + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWVISQLKELDS--SFEFEVKEIVTKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ EID AVHS KDMP +L +GL I RED RD FIS L DL
Sbjct: 60 FVKEIEQAMLDKEIDMAVHSMKDMPAELPEGLCIGCIPEREDHRDAFISKDHVKLADLPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
++IGTSSLRR A +L R D+ + RG I+TRL KL AI+LA AG+ R+
Sbjct: 120 GAIIGTSSLRRGAQILAQRPDLEIKWIRGNIDTRLGKLETEDYDAIILAAAGLSRMGWTS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L+ E P+ GQGA+ IE ++ + L+ + +V ER FL +++G
Sbjct: 180 NVVTEFLDPEVCVPAVGQGALSIECREDDEELLGLLGKFASDQVTKTVTAERTFLHKMEG 239
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DGK ++ + G+ D + +G +AA +
Sbjct: 240 GCQVPIAGYAELLQEEDVKLTVLVASPDGKDIYKETVTGS--DPVQVGEEAAALLTERGA 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KALID 302
>gi|254366979|ref|ZP_04983015.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica 257]
gi|134252805|gb|EBA51899.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica 257]
Length = 300
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 166/303 (54%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I + S LAL ++ + IP I + T+GD I ++ L +IGGK L
Sbjct: 2 KQITIASGESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ +
Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296
Query: 304 VFN 306
+
Sbjct: 297 ILE 299
>gi|163942212|ref|YP_001647096.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4]
gi|229836104|sp|A9VIT8|HEM3_BACWK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|163864409|gb|ABY45468.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4]
Length = 309
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVG--IDPKQVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|299535618|ref|ZP_07048939.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1]
gi|298728818|gb|EFI69372.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1]
Length = 310
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 115/299 (38%), Positives = 158/299 (52%), Gaps = 5/299 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L P + + TKGD+I + L+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L EID AVHS KDMP L GL I PRED RD FIS DL
Sbjct: 60 FVKEIEQALYDKEIDFAVHSMKDMPAVLPDGLVIGCIPPREDARDAFISKGHVKFADLPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+V+GTSSLRR A LL R DI + RG ++TRL KL + AI+LA AG+KRL +
Sbjct: 120 GAVVGTSSLRRSAQLLTVRPDIEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L +E P+ QG++ IE ++ + + + TW + ERAFLA +DG
Sbjct: 180 DVVTEFLPVEQCLPAVAQGSLGIECRADDAELLAELGKLTDSFTWQEAHAERAFLAAMDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A G + G+V A D + + + G DA IG + A +
Sbjct: 240 GCQVPIAGYATSIGEEITLTGLVAAPDASVVFKETVVGT--DAQKIGEELAAILTEQGA 296
>gi|86604967|ref|YP_473730.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab]
gi|86553509|gb|ABC98467.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab]
Length = 310
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 156/304 (51%), Gaps = 5/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LALA + L H P + + LST+GD I + L +IG KGLFT
Sbjct: 1 MRIASRKSELALAQTYWVMGQLQAHH--PGLPLELHTLSTQGDIILDVALAKIGDKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122
+E+E L++G D AVHS KD+PT+L +GL + A RED D + L L
Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITQREDPLDALVLREELRGYQLATLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L + + RG + TRL KL+ + ++LA AG+KRL +E
Sbjct: 119 AGTVIGTSSLRRLAQLRHAFPHLQFKNVRGNLNTRLAKLDRGEYDGLILAVAGLKRLGQE 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G
Sbjct: 179 QRIHEVLDPSVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + +G L+ G+V +G+ ++ G+ D +G A+ ++
Sbjct: 239 GCQVPIGVHSQVQGEELHLTGMVADLEGRQLIRDTQTGSTADPEAVGMALAEKLKRQGAD 298
Query: 303 NVFN 306
+
Sbjct: 299 EILQ 302
>gi|206976024|ref|ZP_03236934.1| porphobilinogen deaminase [Bacillus cereus H3081.97]
gi|217961956|ref|YP_002340526.1| porphobilinogen deaminase [Bacillus cereus AH187]
gi|222097910|ref|YP_002531967.1| porphobilinogen deaminase [Bacillus cereus Q1]
gi|229141205|ref|ZP_04269744.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26]
gi|229198593|ref|ZP_04325295.1| Porphobilinogen deaminase [Bacillus cereus m1293]
gi|226740630|sp|B7HQM4|HEM3_BACC7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800234|sp|B9IZ39|HEM3_BACCQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|206745776|gb|EDZ57173.1| porphobilinogen deaminase [Bacillus cereus H3081.97]
gi|217066883|gb|ACJ81133.1| porphobilinogen deaminase [Bacillus cereus AH187]
gi|221241968|gb|ACM14678.1| porphobilinogen deaminase [Bacillus cereus Q1]
gi|228584875|gb|EEK42991.1| Porphobilinogen deaminase [Bacillus cereus m1293]
gi|228642246|gb|EEK98538.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26]
Length = 309
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKEKVVGT--DPEKVGLEAADRLINQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|255066348|ref|ZP_05318203.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256]
gi|255049558|gb|EET45022.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256]
Length = 312
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L + ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEDFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPATYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIE 304
>gi|47566654|ref|ZP_00237476.1| porphobilinogen deaminase [Bacillus cereus G9241]
gi|228960740|ref|ZP_04122379.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228987716|ref|ZP_04147827.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229158082|ref|ZP_04286152.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342]
gi|47556684|gb|EAL15016.1| porphobilinogen deaminase [Bacillus cereus G9241]
gi|228625401|gb|EEK82158.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342]
gi|228771990|gb|EEM20445.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228798956|gb|EEM45931.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 309
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGITEKTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLINQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|319789486|ref|YP_004151119.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1]
gi|317113988|gb|ADU96478.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1]
Length = 311
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 174/306 (56%), Gaps = 6/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL + ++ + K P + ++ ++TKGD+I + L +IG KGLF
Sbjct: 2 KIRIGTRKSKLALWQSEWVKAQIEK--KFPDVEVELVKITTKGDKILDVPLAKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE+ ++ GE+D AVHS KD+P+KL KGL++ A+ RED RD +S +L+ L
Sbjct: 60 TKEIEEAMLRGEVDIAVHSLKDVPSKLPKGLKLIAFSDREDPRDALLSCGRYTLETLPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E+
Sbjct: 120 AVVGTSSLRRKAQLRILRPDLQIKDLRGNVDTRIRKLKEGQYDAIILAAAGVKRLGWEEE 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243
I EIL+ E PS QG + IE + + + +V+ +N ++ + ERAFL ++G
Sbjct: 180 IDEILSPERMIPSVCQGILGIEGREGDSEVERIVREAVNSYESEVAATVERAFLRTVEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300
C+ + +A + + +G+ +H+ R + +A +IG A+ +
Sbjct: 240 CQVPLGCYAVVNEDRILVRAFISDLNGRFYHKEEGVFRFKDLREADSIGVAVAERLLSAG 299
Query: 301 NKNVFN 306
K +
Sbjct: 300 GKTILE 305
>gi|91200437|emb|CAJ73484.1| strongly similar to hydroxymethylbilane synthase (porphobilinogen
deaminase) [Candidatus Kuenenia stuttgartiensis]
Length = 319
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP +G+R S LAL S L ++ P I +ST GD+IT+ L+ +GG G+
Sbjct: 8 KPIIVGSRGSKLALTQTNWVISELKKLN--PGVEFEIKKISTSGDKITDVPLSRLGGVGV 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E LI +ID AVHSAKD+PT++ + L + A R D DV IS +L+ L
Sbjct: 66 FTKELEVALIKEKIDLAVHSAKDIPTEVSEKLTLGAMPKRVDPSDVLISAKNVTLERLPG 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRRKA LL R D ++D RG ++TRL KL + I++A+AG+ R+
Sbjct: 126 NARIGTSSLRRKAQLLALRPDFEIVDLRGNLDTRLKKLEADDLDGIIVAHAGLIRIGYTG 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EI+ E P+ GQG++ IE ++ + +++ ++ T +V ERA LA+L G
Sbjct: 186 QISEIIPFEIMLPAVGQGSLGIEIRKDDERINKILSKMDDLHTRIAVEAERALLAKLQGG 245
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A ++ ++ DG+ S G A +G + AQ +
Sbjct: 246 CQVPIGAHAKVLNDEVHLEAVICTLDGERTIRDSHKGPANQAAAVGNELAQRMLDNGGDK 305
Query: 304 VFN 306
+
Sbjct: 306 ILQ 308
>gi|78189475|ref|YP_379813.1| porphobilinogen deaminase [Chlorobium chlorochromatii CaD3]
gi|123757008|sp|Q3AQF5|HEM3_CHLCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78171674|gb|ABB28770.1| Porphobilinogen deaminase [Chlorobium chlorochromatii CaD3]
Length = 313
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 118/307 (38%), Positives = 170/307 (55%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L + P I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAELSKHY--PDMEITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK L++ EID AVHS KD+PT +GL I+++ RED RDV IS LKDL
Sbjct: 60 LFTKDIEKHLLAREIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGVKLKDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ + D RG + TR K ++ + A++LAYAG+ RL
Sbjct: 120 PNARMATSSLRRMSQLLSVRPDLDIRDIRGNLNTRFQKFDDGEFDAMMLAYAGVYRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + P+ GQGA+ IET V++ + +E+V+++NH T ERA L L G
Sbjct: 180 DRISEILPHDMMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIRF 298
C+ I +A TL V + DGK E+++ G + A G A+ +
Sbjct: 240 GCQIPIGAYATFSNGTLKLLAFVGSVDGKTALRNEITKTGLTSPEQAEEAGIALAEELLK 299
Query: 299 ISNKNVF 305
+
Sbjct: 300 QGADAIL 306
>gi|229105103|ref|ZP_04235754.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28]
gi|228678284|gb|EEL32510.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28]
Length = 309
Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A K + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTKDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|251773212|gb|EES53764.1| porphobilinogen deaminase [Leptospirillum ferrodiazotrophum]
Length = 321
Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 160/302 (52%), Gaps = 4/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LAL A + + + + T GD I + L+++GGKGLF
Sbjct: 9 PIRIGTRGSELALWQARHVAAMIR---HTAGLESELTIIKTTGDMILSVPLSQVGGKGLF 65
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ LI+G ID AVHS KD+P L +GL+I A L RED RD F+S+ S L
Sbjct: 66 VKEIEEALIAGTIDLAVHSMKDVPAFLPEGLEIGAILSREDPRDAFVSNAYSSFSSLPPG 125
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSSLRR A L + R D+ RG + TRL KL+ N+ AI+LA AG+ RL
Sbjct: 126 ARIGTSSLRRMAQLKKRRPDLRFESLRGNVGTRLRKLDENQIDAIILAAAGLIRLGFSDR 185
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+E L +E P+ GQGA+ +E + + + ++ ++ +T V ER L+ LDG C
Sbjct: 186 IREYLPVELSLPAVGQGALGLECRTGDHRIRTILARMHDPETTACVLAERGVLSALDGGC 245
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ IA A + +L +G E +G +A +G +AAQ + +
Sbjct: 246 QLPIAAHARTISPEQIELIARILDVEGTTLLEEHTSGPAKEAHRLGVEAAQKLLSRGGQK 305
Query: 304 VF 305
+
Sbjct: 306 IL 307
>gi|297568516|ref|YP_003689860.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2]
gi|296924431|gb|ADH85241.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2]
Length = 311
Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LALA + + + + P ++ ++ + TKGD+I + L ++GGKGL
Sbjct: 3 KTIRIGTRASMLALAQSNWIKGRIEA--QYPGCSVELVKIVTKGDKIVDVPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ E+D AVHS KD+P +L +GL I RE D FI++ ++L ++
Sbjct: 61 FVKEIEEALLRREVDIAVHSMKDVPAELPEGLHIGIITEREKPFDAFITNNYKTLAEVPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRRKA L R R D+ + D RG ++TRL KL+ AI+LA AG+ RL
Sbjct: 121 GATIGTSSLRRKAQLARLRPDLKIEDLRGNLDTRLRKLDEGVYDAIILAAAGLNRLDLFH 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ P+ QGA+ IE + +++ ++H +T +V+ ER++L L+G
Sbjct: 181 RATFCFQPDEMLPAVAQGAVGIELRRADEDLLQMLSFMDHRETTLAVHAERSYLKRLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ +AGFA G TL G++ + DG + +G A +G + A+ + + +
Sbjct: 241 CQVPLAGFATLAGQTLTINGLIASVDGGKMVKAKHSGPAAQAKTLGLELAEELLAMGGRE 300
Query: 304 VFN 306
+
Sbjct: 301 ILE 303
>gi|149915548|ref|ZP_01904074.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b]
gi|149810440|gb|EDM70283.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b]
Length = 304
Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats.
Identities = 127/302 (42%), Positives = 177/302 (58%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR SPLALA A+ETRS L +PP I+ + T GDRI +R L EIGGKGLFT
Sbjct: 1 MKLGTRGSPLALAQAYETRSRLSAAFDLPPEAFEIVVIKTTGDRIIDRPLKEIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE+ ++SGEID A+HS KDMP +GL + YLPRED+RD F+S L DL +
Sbjct: 61 REIEEAMLSGEIDIAIHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSPHVGGLADLEPGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V
Sbjct: 121 KVGTSSLRRKAQVLVAYPHLDVVEFRGNVQTRLKKLQDGVAACTFLAMAGLNRLGRSEVA 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGAI IE ++ + E++ I+ T + ERAFLA LDGSC+
Sbjct: 181 TAAIETDEMLPAVAQGAIGIERRRDDTRTAEMLAAIHDTPTGQRLAAERAFLAALDGSCE 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A G TL G VL DG + ++ D +G + + + + F
Sbjct: 241 TPIAGLAELDGGTLRLRGQVLRPDGSEALDDDQSAPIEDGAKLGHEMGRKLLERAGPGFF 300
Query: 306 NF 307
++
Sbjct: 301 DW 302
>gi|114765839|ref|ZP_01444932.1| porphobilinogen deaminase [Pelagibaca bermudensis HTCC2601]
gi|114541838|gb|EAU44875.1| porphobilinogen deaminase [Roseovarius sp. HTCC2601]
Length = 319
Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats.
Identities = 131/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR L +P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAHETRDRLAAAFDLPQDAFEIVVIKTTGDDRAMIAADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE++L+SG ID AVHS KDMPT+ +GL + YLPRED RD FIS L
Sbjct: 71 KGLFTKEIEEQLLSGGIDIAVHSMKDMPTEQPEGLVLDCYLPREDERDAFISPGHAGLAA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++R+
Sbjct: 131 LPEGTVVGTSSLRRRAQLLNRRPDLQVVEFRGNVQTRLKKLEDGVAAATFLAMAGLRRMD 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ +D P+ QGAI IE ++ + +++ I+ DT + ER FLA L
Sbjct: 191 MTDIPMTAMSPDDMLPAIAQGAIGIERRSDDSRTGDMLAAIHDTDTATRLAAERTFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G L G +LA DG H +G D +GR A+ + +
Sbjct: 251 DGSCETPIAGLAELDGDRLRLRGEILAPDGSASHAGELSGPAADGPAMGRALAEELLARA 310
Query: 301 NKNVFNF 307
+ F +
Sbjct: 311 GPDFFAW 317
>gi|293604316|ref|ZP_06686723.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553]
gi|292817193|gb|EFF76267.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553]
Length = 315
Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 161/301 (53%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF
Sbjct: 7 LVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ L DL +
Sbjct: 65 KELENALLDGRADLAVHSLKDVPVDLQAPFELCAILDRADPRDAFVSNRYAGLADLPAGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG++RL E I
Sbjct: 125 VVGTSSLRRESQIRARFPTLVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLQRLGLESRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L+ D P+ GQGA+ IE + + + + T V ERA +L GSC+
Sbjct: 185 RSLLDPADSLPAAGQGALGIEIRNDRDDMRAWLAPLISAATTSCVQAERAVSRKLGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A FA G TL +V + DG R+G DA +G AAQ + +
Sbjct: 245 VPLAAFAEISGDTLSLRALVASPDGVRMVHTRRSGPVADAQALGEAAAQELLDAGAAAIL 304
Query: 306 N 306
Sbjct: 305 Q 305
>gi|301055971|ref|YP_003794182.1| porphobilinogen deaminase [Bacillus anthracis CI]
gi|300378140|gb|ADK07044.1| porphobilinogen deaminase [Bacillus cereus biovar anthracis str.
CI]
Length = 309
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGVPFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVG--IDPKEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|317052496|ref|YP_004113612.1| porphobilinogen deaminase [Desulfurispirillum indicum S5]
gi|316947580|gb|ADU67056.1| porphobilinogen deaminase [Desulfurispirillum indicum S5]
Length = 308
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 165/306 (53%), Gaps = 7/306 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL A ++ L + + + + TKGD+I + L ++GGKGLF
Sbjct: 2 KIVIGTRASQLALWQAEHIKAELES--RWDDVQVELKKIITKGDKILDSPLAKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE +LI G ID AVHS KD+PT+ +GL++ A RED RD FIS +S+ +L
Sbjct: 60 VKEIENELIDGTIDIAVHSMKDVPTEFPEGLELFAITEREDPRDAFISRNGKSMAELGQQ 119
Query: 125 S--VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IGTSSLRR+A LL +++ RG ++TRL ++ + I+LA AG+KRL+ E
Sbjct: 120 KDVTIGTSSLRRQAQLLTLYPHWNIVSIRGNVQTRLKRMEERQMDGIILAAAGMKRLELE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++KE + E P+ GQGA+ +E + +E ++ + H T V ERA L ++G
Sbjct: 180 HLVKEYIAPEVMIPAIGQGALGLEVRSADTALKERLEFLRHPVTTQCVLAERALLRTMEG 239
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I +A + +++ +V + DGK + GN + +G A +
Sbjct: 240 GCQVPIGAYAVPKENGSVFLNALVASVDGKEVVKGQLEGN--NPEELGVTLANQMLNSGA 297
Query: 302 KNVFNF 307
+ + +
Sbjct: 298 RAILSV 303
>gi|88797646|ref|ZP_01113235.1| porphobilinogen deaminase [Reinekea sp. MED297]
gi|88779818|gb|EAR11004.1| porphobilinogen deaminase [Reinekea sp. MED297]
Length = 313
Score = 357 bits (918), Expect = 8e-97, Method: Composition-based stats.
Identities = 110/313 (35%), Positives = 172/313 (54%), Gaps = 11/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++ +STKGD+I + L+++GG
Sbjct: 1 MSQ-IVRIATRKSPLALWQAEFVKAELEKHH--PDLQVELVKISTKGDQILDVALSKVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + +GE D AVHS KD+P ++ G +++ RE+ D F+S+ S+ D
Sbjct: 58 KGLFIKELEVAMEAGEADMAVHSMKDVPMEMPAGFELATICERENPFDAFVSNDFDSIDD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A +L R D+ V RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 118 LPQGAVLGTSSLRRQAQILAHRPDLDVRFLRGNVGTRLGKLDDGEYQAIVLACAGLIRLD 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++ + P+ GQGA+ IE + +E ++ ++HE+T V+ ERA L
Sbjct: 178 LQARIRQEIPGNLSLPAVGQGAVGIEIRAGDIALKERLQPLSHENTTLRVSAERAMNRVL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH----EVSRNGNR----CDAINIGRDA 292
+G C+ IAG+A L G V A DG E++ G A ++G
Sbjct: 238 NGGCEVPIAGYAVLDDQVLKLEGRVGAVDGSKLLKSSAEMTLTGPVSQQISQATDLGHMV 297
Query: 293 AQYIRFISNKNVF 305
A+ + + +
Sbjct: 298 ARDLLSQGAQALL 310
>gi|296314908|ref|ZP_06864849.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768]
gi|296838093|gb|EFH22031.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768]
Length = 311
Score = 357 bits (918), Expect = 9e-97, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARELIG 304
>gi|317486609|ref|ZP_07945428.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6]
gi|316922143|gb|EFV43410.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6]
Length = 308
Score = 357 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A + SL VH P + + + TKGD I + L ++GG
Sbjct: 1 MEK--LVIATRGSRLALWQANHVKDSLEAVH--PGLAVELNIIKTKGDIILDVPLAKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+SG D AVHS KD+P +L +GL + RED D+F+S SL++
Sbjct: 57 KGLFVKEIEEALLSGAADIAVHSMKDVPMELPEGLILGIVPEREDPTDLFLSVDYDSLEN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A +L R D+ V+ RG ++TRL KL + AI++A AG+KRL
Sbjct: 117 LPAGAVVGTSSLRRQAQVLAQRPDLEVVSLRGNVDTRLRKLTEGQFAAIIMATAGMKRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ L F P+ GQGA+ IE + E++ + H T V ER LA L
Sbjct: 177 LSVPKECPLAPPAFIPAVGQGALGIEFREDRKDLAEMLSFMEHRPTRICVEAERGLLAGL 236
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C+ IAG A T G+V DG + G +A +G A+ +
Sbjct: 237 DGGCQVPIAGHAEMLDDGTFELEGLVGEVDGSVIIRRKVTGRADEARAVGFALARSLAED 296
Query: 300 SNKNVF 305
+
Sbjct: 297 GGAEIL 302
>gi|189499889|ref|YP_001959359.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1]
gi|238058915|sp|B3EPK0|HEM3_CHLPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189495330|gb|ACE03878.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1]
Length = 313
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 122/307 (39%), Positives = 164/307 (53%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P I + + T GD + + L++IG G
Sbjct: 2 KKKLIIGTRSSPLALWQADFTQAELSK--HFPDLEIELKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LISGEID AVHS KD+PT+ +GL +SA+ RED RDV IS +SLK L
Sbjct: 60 LFTKDIEKHLISGEIDLAVHSLKDVPTETPEGLMLSAFTEREDTRDVIISKNGESLKTLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 QDAKIATSSLRRTSQLLSMRPDFQMGDIRGNLNTRFKKFDESDFDAMMLAYAGVHRLNFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ +E+V V+N+ +T ERA L L G
Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEATKEIVSVMNNVNTEFCTKAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRDAAQYIRF 298
C+ I +A K L+ V + DGK A G + A+ +
Sbjct: 240 GCQIPIGSYASLKNGNLHLLAYVGSVDGKRTIRNEITKENCTLPEQAEQAGIELAEELLK 299
Query: 299 ISNKNVF 305
+
Sbjct: 300 QGANEIL 306
>gi|229032118|ref|ZP_04188096.1| Porphobilinogen deaminase [Bacillus cereus AH1271]
gi|228729208|gb|EEL80206.1| Porphobilinogen deaminase [Bacillus cereus AH1271]
Length = 309
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A + + +V + DG + + + G +G +AA +
Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGTNS--EEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|217969858|ref|YP_002355092.1| porphobilinogen deaminase [Thauera sp. MZ1T]
gi|217507185|gb|ACK54196.1| porphobilinogen deaminase [Thauera sp. MZ1T]
Length = 310
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 152/300 (50%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L +H P + ++ ++T+GD+I +R L ++GGKGLF
Sbjct: 9 IVIATRESRLALWQAEHIKARLEALH--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + + RE D F+S +SL D+ +
Sbjct: 67 KELETALLDGRADIAVHSMKDVPMVMEPEFALPCITAREVPLDAFVSSRYESLADMPPGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL + I
Sbjct: 127 VVGTSSLRRESQIHAQYPFLGVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLGERI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ E P+ GQGA+ IE ++ + DT V ERA L GSC+
Sbjct: 187 RSVMPAEVSLPAAGQGALGIECLSARADVIGWLQPLVDADTTACVLAERAVARALAGSCE 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + L+ G V DG R G +A +GR A +R + +
Sbjct: 247 VPLGAYAVMREGRLWLRGFVARPDGSTIVRAEREGAPAEAEALGRALADDLRAQGAEAIL 306
>gi|302756929|ref|XP_002961888.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii]
gi|300170547|gb|EFJ37148.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii]
Length = 353
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 130/309 (42%), Positives = 188/309 (60%), Gaps = 7/309 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + + I+ + T GD+I N+ L +IGGKGL
Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L
Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL
Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG
Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283
Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRF 298
SC++ IAG+A+ F G+V + DG E +R+G N + + +G+DAA+ +
Sbjct: 284 SCRTPIAGYAHRDKLTDECKFRGLVASPDGTQVLETTRSGQYNLDEMVAMGKDAAKELLS 343
Query: 299 ISNKNVFNF 307
S ++ N+
Sbjct: 344 KSGPSLLNW 352
>gi|302817137|ref|XP_002990245.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii]
gi|300141954|gb|EFJ08660.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii]
Length = 353
Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats.
Identities = 130/309 (42%), Positives = 188/309 (60%), Gaps = 7/309 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + + I+ + T GD+I N+ L +IGGKGL
Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L
Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL
Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG
Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283
Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRF 298
SC++ IAG+A+ F G+V + DG E +R+G N + + +G+DAA+ +
Sbjct: 284 SCRTPIAGYAHRDKLTDECKFRGLVASPDGTQVLETTRSGQYNFDEMVAMGKDAAKELLS 343
Query: 299 ISNKNVFNF 307
S ++ N+
Sbjct: 344 KSGPSLLNW 352
>gi|242060648|ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
gi|241931444|gb|EES04589.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
Length = 356
Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats.
Identities = 130/306 (42%), Positives = 182/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300
C++ IA +AY F G++ + DG E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|320529107|ref|ZP_08030199.1| porphobilinogen deaminase [Selenomonas artemidis F0399]
gi|320138737|gb|EFW30627.1| porphobilinogen deaminase [Selenomonas artemidis F0399]
Length = 311
Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKEMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G+ID AVHS KDMPT++ GL I A R D D F+S+ ++++
Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPTEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ + A++LA AG++RL
Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGEFDAVVLAAAGLRRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ +L P+ GQGA+ IE ++ + + + D + ERAFL +
Sbjct: 179 LGDRIRSVLPRAMMLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRV 238
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A G LY ++ + DG +G A IG A+ + +
Sbjct: 239 EGGCQIPVGVYAEIGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDM 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GGREIL 304
>gi|82703803|ref|YP_413369.1| porphobilinogen deaminase [Nitrosospira multiformis ATCC 25196]
gi|82411868|gb|ABB75977.1| hydroxymethylbilane synthase [Nitrosospira multiformis ATCC 25196]
Length = 321
Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 161/304 (52%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
I TR S LAL A R L +++ P I ++T+GD+I + TL++IGGK
Sbjct: 6 TPNKIVIATRESALALWQANFIRDRLAELY--PQMEFQISGMTTRGDQILDVTLSKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E+ L G D AVHS KD+P + G ++A RED RD F+S+ L L
Sbjct: 64 GLFIKELEQALEDGRADIAVHSMKDVPMDMPAGFALAAITEREDPRDAFVSNKYARLDAL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 124 PPGSVVGTSSLRRESQLRARFPHLQVQPLRGNVQTRLRKLDEGQFAAIILAAAGLKRLGL 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I +L+ + P+ GQGA+ IE + +L++ ++H T V ERA L
Sbjct: 184 AERITALLSPDLSLPAVGQGALGIECRADRSDLIKLMEPLHHIPTARCVEAERAMSRALG 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ + GFA G L G V + DG NG+ D +IG A+ ++
Sbjct: 244 GSCEVPLGGFAEIDGHVLRLRGFVASQDGIRMVSDELNGSPDDCASIGAQLAKNLKAKGA 303
Query: 302 KNVF 305
+ +
Sbjct: 304 EEIL 307
>gi|229098938|ref|ZP_04229873.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29]
gi|228684436|gb|EEL38379.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29]
Length = 309
Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L+ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA
Sbjct: 60 FVKEIEHALLMKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G
Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A K + +V + DG + + + G + +G +AA +
Sbjct: 240 GCQVPIAGYATLTKDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADRLIKQGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELI 301
>gi|84500376|ref|ZP_00998625.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597]
gi|84391329|gb|EAQ03661.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597]
Length = 315
Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats.
Identities = 127/304 (41%), Positives = 177/304 (58%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A E R L +PP + + T GDR+ +R L EIGGKGL
Sbjct: 10 RPLKIGTRGSPLALAQAHEARDRLAHAFDLPPEAFEVCVIQTTGDRVQDRPLKEIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L++G ID AVHS KDMP +GL + YLPRED RD F+S+ + L +
Sbjct: 70 FTREIEHALLTGGIDIAVHSMKDMPVLQPEGLLLDCYLPREDPRDAFVSNLYERLDQIPA 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A +L R D+ V++FRG ++TRL KL + A A LA AG+ RL +
Sbjct: 130 GARVGTSSLRRRAQVLVRRPDLEVVEFRGNVQTRLRKLADGVASATFLAMAGLNRLDRAS 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + L ++ P+ QGAI IE ++ L++ I+ +T + ERAFLA LDGS
Sbjct: 190 IARSALATDEMLPAVAQGAIGIERREDDHATAALLEAIHDPETARQLAAERAFLAALDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A +G TL G +L DG + R+ D +GR+ + +
Sbjct: 250 CETPIAGLADLEGGTLRLRGEILRPDGSEALKDDRSAPVEDGAKLGREMGAALLAQAGDG 309
Query: 304 VFNF 307
F+F
Sbjct: 310 FFDF 313
>gi|296136292|ref|YP_003643534.1| porphobilinogen deaminase [Thiomonas intermedia K12]
gi|294340528|emb|CAZ88912.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Thiomonas sp.
3As]
gi|295796414|gb|ADG31204.1| porphobilinogen deaminase [Thiomonas intermedia K12]
Length = 317
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 160/303 (52%), Gaps = 5/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L ++ P ++ I ++T+GD+I +++L +IGGKGLF
Sbjct: 11 LVIATRESRLALWQAEHVRDLLKGLY--PQCDVRIFGMTTQGDQILDKSLAKIGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + G D AVHS KD+P L G ++A + RED RD ++S +L DL +
Sbjct: 69 KELEVAMEQGHADLAVHSLKDVPMVLPTGFALTAVMEREDPRDAWVSPHYANLADLPAGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L + V RG ++TRL KL+ + ILLA AG+KRL + +
Sbjct: 129 VVGTSSLRRESQLRARYPHLKVQALRGNLDTRLRKLDEGQYAGILLAAAGLKRLGLGERV 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ ED P+ GQ A+ IE + P + + +NH T + ERA L GSC
Sbjct: 189 RAVIEPEDMLPAVGQAALGIEIRADRPDLAQALAALNHPPTALCTHAERAVSRGLGGSCT 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFISNK 302
+ + +A +G ++ ++ DG + G D A +G+ A+ +R
Sbjct: 249 TPMGAYATLEGEAMHLRAVLGLPDGSQALHAQQRGRVTDLAQAEALGQQVARQLREQGAD 308
Query: 303 NVF 305
+
Sbjct: 309 ALL 311
>gi|323177814|gb|EFZ63398.1| porphobilinogen deaminase [Escherichia coli 1180]
Length = 279
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 148/268 (55%)
Query: 38 IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97
+ ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 2 VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGL 61
Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TR
Sbjct: 62 VTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 121
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL
Sbjct: 122 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTREL 181
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 182 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 241
Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G +A +G A+ + + +
Sbjct: 242 RRGAPQNAEQMGISLAEELLNNGAREIL 269
>gi|21674248|ref|NP_662313.1| porphobilinogen deaminase [Chlorobium tepidum TLS]
gi|25453021|sp|Q8KCJ4|HEM3_CHLTE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21647416|gb|AAM72655.1| porphobilinogen deaminase [Chlorobium tepidum TLS]
Length = 312
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 170/306 (55%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P NI + + T GD + + L++IG G
Sbjct: 2 KKELIIGTRSSPLALWQAEFTKAEL--SRHFPELNITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK L++ EID AVHS KD+PT +GL IS++ RED RDV IS + + LKDL
Sbjct: 60 LFTKDIEKHLLAKEIDLAVHSLKDVPTGTPEGLVISSFTKREDTRDVIISKSGKGLKDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ ++D RG + TR K ++ + A++LAYAG+ RL+
Sbjct: 120 PNARMATSSLRRMSQLLSMRPDLQILDIRGNLNTRFKKFDDGEFDAMMLAYAGVYRLEFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + P+ GQGA+ IET ++ + E+V+V+N +T ERA L L G
Sbjct: 180 DRISEILPHDVMLPAVGQGALGIETRTDDAETIEIVRVMNDSNTEICCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFI 299
C+ I + TL V + DGK +A +G + A+ + +
Sbjct: 240 GCQIPIGCYGSYISGTLKLLAFVGSVDGKTALRNELTKPVNTPEEAEAVGIELAEVLLSM 299
Query: 300 SNKNVF 305
+ +
Sbjct: 300 GAEKIL 305
>gi|33593520|ref|NP_881164.1| porphobilinogen deaminase [Bordetella pertussis Tohama I]
gi|39931430|sp|Q7VVU9|HEM3_BORPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33572876|emb|CAE42812.1| porphobilinogen deaminase [Bordetella pertussis Tohama I]
gi|332382928|gb|AEE67775.1| porphobilinogen deaminase [Bordetella pertussis CS]
Length = 314
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 158/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF
Sbjct: 7 LTIATRASRLALWQAEHVRDLLRA--RYPACSVELLTLTTRGDQILDRTLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL +
Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I
Sbjct: 125 AVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L +D P+ GQGA+ IE + ++ + T V ERA L GSC+
Sbjct: 185 RALLEPDDSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A G L +V A DG+ R G R A IG AA+ + +
Sbjct: 245 VPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>gi|193212401|ref|YP_001998354.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327]
gi|209572771|sp|P28464|HEM3_CHLP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|193085878|gb|ACF11154.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327]
Length = 312
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 171/306 (55%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L + P NI + + T GD + + L++IG G
Sbjct: 2 KKEIIIGTRSSPLALWQAEFTKAELSK--RFPDMNITLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK L++GEID AVHS KD+PT +GL I+++ RED RDV IS + + L DL
Sbjct: 60 LFTKDIEKHLLAGEIDLAVHSLKDVPTGTPEGLVITSFTEREDTRDVIISKSGKGLMDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ ++D RG + TR K + A++LAYAG+ RL+
Sbjct: 120 QNAKMATSSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET ++ + +E+V+V+N ++T ERA L L G
Sbjct: 180 DRITEILPHETMLPAVGQGALGIETRTDDAETREIVRVLNDDNTEMCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFI 299
C+ I F TL V + DGK +A +G + A+ + +
Sbjct: 240 GCQIPIGSFGSYIDGTLKLLAFVGSVDGKTGLRNEVTKAVKTPEEAEAVGIELAEILLSM 299
Query: 300 SNKNVF 305
+ +
Sbjct: 300 GAEKIL 305
>gi|294789041|ref|ZP_06754281.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453]
gi|294483143|gb|EFG30830.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453]
Length = 311
Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 160/302 (52%), Gaps = 3/302 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A ++ L ++ P ++ I+ ++T+GD+I ++TL++IGGKGLF
Sbjct: 7 LVIASRESALAMWQAQHIQAQLQQLY--PQCDVSILGMTTQGDQILDKTLSKIGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L +G + A R + D F+S+ L+DL +
Sbjct: 65 KELEVALQDGRADLAVHSIKDVPMVLPEGFALVAISERANPFDAFVSNHYTRLEDLPKGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ I
Sbjct: 125 IVGTSSLRREAQLRARFPHLTIQPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHNRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L+ D P+ GQGA+ IE + + +NH T V ERA L GSC+
Sbjct: 185 RHVLSPADSLPAAGQGALGIEIAAHRTDLIATLLPLNHAKTAACVTAERALARALGGSCQ 244
Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A + L +G+V DG + + A +GR A+ + ++
Sbjct: 245 VPLAAYCTADDAGLLTLHGLVAHPDGSVVLNANAQAPAQYADALGRAVAKKLADDGAMDI 304
Query: 305 FN 306
Sbjct: 305 IQ 306
>gi|224008054|ref|XP_002292986.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335]
gi|220971112|gb|EED89447.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335]
Length = 330
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 123/307 (40%), Positives = 181/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62
P RIGTR SPLALA A+ETR L++ I I + T+GD I +++L E+GGKG
Sbjct: 9 PLRIGTRGSPLALAQAYETRRRLIENFPELEAEGAIEICVMKTQGDMILDKSLMELGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKD 120
LFT+E++ L+ E+D VHS KD+PT L +G + LPRED D FI+ + + D
Sbjct: 69 LFTKELDTALLGDEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITANGDIKRIAD 128
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +SVIGT+SLRR+A +L + ++FRG ++TRL KL++ A LLA AG+KR+
Sbjct: 129 LPDNSVIGTASLRRQAQILAQNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMD 188
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IL ++ P+ QGAI I+ ++ ++ + + +N DT VNCERAFL L
Sbjct: 189 MDDCATAILEWDEMLPAVAQGAIGIQCRSDDTRSLKYIDALNCMDTHVCVNCERAFLEAL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG+CK+ IAG A + F G++ DG + +E G DA+ IGR A + ++ +
Sbjct: 249 DGNCKTPIAGQARIVDGKIVFKGLIAMPDGSLKYETEATGEIADAVEIGRKAGEELKAQA 308
Query: 301 NKNVFNF 307
+ F
Sbjct: 309 GEKFFEM 315
>gi|297810933|ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata]
gi|297319187|gb|EFH49609.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 134/308 (43%), Positives = 186/308 (60%), Gaps = 6/308 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKG
Sbjct: 74 IIRIGTRGSPLALAQAYETREKLKSKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKG 133
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA SL +L
Sbjct: 134 LFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAASLAELP 193
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 194 AGSVVGTASLRRKSQILHKYPALRVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSM 253
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LD
Sbjct: 254 TENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLD 313
Query: 242 GSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRF 298
GSC++ IAG+ A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 314 GSCRTPIAGYAAKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLS 373
Query: 299 ISNKNVFN 306
+ F
Sbjct: 374 RAGPGFFG 381
>gi|15241573|ref|NP_196445.1| HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase
[Arabidopsis thaliana]
gi|2495179|sp|Q43316|HEM3_ARATH RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10 [Arabidopsis thaliana]
gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|332003894|gb|AED91277.1| Porphobilinogen deaminase [Arabidopsis thaliana]
Length = 382
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 133/308 (43%), Positives = 186/308 (60%), Gaps = 6/308 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKG
Sbjct: 74 IIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKG 133
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA +L +L
Sbjct: 134 LFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELP 193
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 194 AGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSM 253
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LD
Sbjct: 254 TENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLD 313
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRF 298
GSC++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 314 GSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLS 373
Query: 299 ISNKNVFN 306
+ F
Sbjct: 374 RAGPGFFG 381
>gi|190575960|ref|YP_001973805.1| porphobilinogen deaminase [Stenotrophomonas maltophilia K279a]
gi|229846305|sp|B2FI06|HEM3_STRMK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|190013882|emb|CAQ47520.1| putative porphobilinogen deaminase [Stenotrophomonas maltophilia
K279a]
Length = 303
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 2/303 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL L +
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDPPFALPAMLTRHDPADGFVSNLYASLDALPIG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGER 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L + P+P QGA+ +E N + L ++ T V ERA L GSC
Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAPLDDAATRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A A +G L+ G+V ++ G D +G+ A+ + +
Sbjct: 241 HVPVAAIAQWQGDDLHLQGLVGSASDGRAVRAEAVGPANDPEGLGQRVAKLLLDDGAGEL 300
Query: 305 FNF 307
N
Sbjct: 301 LNV 303
>gi|89056336|ref|YP_511787.1| porphobilinogen deaminase [Jannaschia sp. CCS1]
gi|88865885|gb|ABD56762.1| porphobilinogen deaminase [Jannaschia sp. CCS1]
Length = 318
Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats.
Identities = 128/307 (41%), Positives = 181/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P RIGTR SPLALA A ETR+ LM +P I+ + T GD + L E+GG
Sbjct: 11 PLRIGTRGSPLALAQARETRARLMAAWDLPEDAFEIVVIKTTGDDRSLIDADVALKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++ ID AVHS KDMPT GL + YLPRED+RD F+S L
Sbjct: 71 KGLFTKEIEEDMLTSSIDIAVHSMKDMPTVQPDGLMLDCYLPREDVRDAFVSVNHDGLHA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++G+SSLRR+A L R D++V++FRG ++TR+ KL A A LA AG++RL
Sbjct: 131 LPEGAIVGSSSLRRRAQLFARRPDLNVVEFRGNVQTRMKKLGGGVADATFLAMAGLRRLG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+V+K + +ED P+ QGAI IE V++ +A +++ I++ +T + ER+FL L
Sbjct: 191 MEEVVKSAIEVEDMLPAVAQGAIGIERRVSDTRAGDMLAAIHNTETGQRLAAERSFLKGL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IA A G TL G +L DG R D +G D A+ +R +
Sbjct: 251 DGSCQTPIAALAELDGGTLRLRGEILRPDGSEVLTDDRTAPIEDGAALGADMARDLRARA 310
Query: 301 NKNVFNF 307
F++
Sbjct: 311 GDGFFDW 317
>gi|113868875|ref|YP_727364.1| porphobilinogen deaminase [Ralstonia eutropha H16]
gi|113527651|emb|CAJ93996.1| porphobilinogen deaminase [Ralstonia eutropha H16]
Length = 337
Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 170/305 (55%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 19 QKLVIASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + G D AVHS KD+P +L +G ++A + RED RD +S SL ++
Sbjct: 77 FVKELEFAMDEGRADLAVHSLKDVPMELPEGFALTAVMEREDPRDALVSSAYASLDEMPA 136
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 137 GTVVGTSSLRREAALRSRYPQLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGE 196
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ ++ I+ P+ GQGA+ IE N P+ + + +NH+ T +V+ ERA L GS
Sbjct: 197 RIRALIPIDVSLPAAGQGALGIEILANRPELAQWLAPLNHQPTALAVSAERAVSRMLGGS 256
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFIS 300
C+ +A A +G L V DG + +G D A +G+ A+ +
Sbjct: 257 CQVPLAAHARWEGDQLKLDAFVALPDGTRAIRAAASGPAVDLAAAEALGQACARDLLAQG 316
Query: 301 NKNVF 305
+ +
Sbjct: 317 AEAIL 321
>gi|242373962|ref|ZP_04819536.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1]
gi|242348316|gb|EES39918.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1]
Length = 308
Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats.
Identities = 100/304 (32%), Positives = 176/304 (57%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L ++ P +I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDELKEIE--PDLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +IS L +L
Sbjct: 60 FVKEIQNELFNKDIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG++R+ +
Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLNKLETEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + +L+K +++ + V ER FL+E+DG
Sbjct: 180 DIVTTYLDKDILLPAIGQGALGIECRSDDEELLDLLKKVHNHEVAQCVTAERTFLSEMDG 239
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A G+ + F G+++ DGK +E + G+ + + +G++ ++ ++
Sbjct: 240 SCQVPIGGYATIDGNSQIEFTGLIMTPDGKERYEHTARGH--NPVELGQEVSRVLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|119503707|ref|ZP_01625789.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080]
gi|119460215|gb|EAW41308.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080]
Length = 302
Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 162/306 (52%), Gaps = 8/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I TR SPLAL A L ++ P + ++ ++++GD++ ++ L ++GG
Sbjct: 1 MSK--LVIATRESPLALWQANYVADRLRALY--PELMVELLGMTSRGDQLLDKPLYKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P L GL + RED RD + +A L +
Sbjct: 57 KGLFVKELETALLDGRADIAVHSMKDVPMALPPGLTLGVICEREDPRDALVGISA--LSE 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + GTSSLRR + R R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 115 LEQGARFGTSSLRRACQIRRVRPDLEIGFLRGNVNTRLAKLDAGEFDAIILATAGLVRLG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E P+ GQGA+ IE ++ + EL+ +N DT + V ERA + L
Sbjct: 175 FESRIGARIEPEVSLPAGGQGAVGIEYRSDDDRVAELLAPLNDADTAECVTAERAVVRVL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C IA +A +G+ L+ +V + DG+ E G +A +G++ AQ +
Sbjct: 235 DGGCDVPIASYAVKEGNELWLRALVGSVDGRSVLEAQSRG--ANAEELGQEVAQALLDGG 292
Query: 301 NKNVFN 306
V
Sbjct: 293 AAAVLE 298
>gi|163745168|ref|ZP_02152528.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45]
gi|161381986|gb|EDQ06395.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45]
Length = 315
Score = 355 bits (911), Expect = 5e-96, Method: Composition-based stats.
Identities = 132/304 (43%), Positives = 179/304 (58%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P IGTR S LALA A E R L +P I+ + T GD+I +R L EIGGKGL
Sbjct: 10 RPLNIGTRGSLLALAQANEVRDRLAAAFDLPFEAFTIVVIKTTGDKIIDRPLKEIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L+ G ID AVHS KDMPT GL I YLPRED+RD FIS +S+ DL
Sbjct: 70 FTREIEAALLDGSIDIAVHSMKDMPTLQPGGLVIDTYLPREDMRDAFISPHLKSIADLPE 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A + R D+ V++FRG ++TRL KL + A A LA AG+ RLK ++
Sbjct: 130 GAVVGTSSLRRRAQVKLRRPDLEVVEFRGNLQTRLKKLEDGVAEATFLAMAGLNRLKMDE 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V K ++ +D P+ QGAI IE +++ +A +++ I+ T + + ERAFLA LDGS
Sbjct: 190 VPKAAVHTDDMLPAIAQGAIGIERRMDDTRAADMLAAIHDRATGEQLAAERAFLATLDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A G+ + G VL DG D GR+ A+ + +
Sbjct: 250 CETPIAGLAELNGTNMRLRGQVLRPDGSDAIGDDVTCTISDGAEAGREMARKLLAEAGPG 309
Query: 304 VFNF 307
F++
Sbjct: 310 FFDW 313
>gi|21592624|gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 382
Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats.
Identities = 132/308 (42%), Positives = 185/308 (60%), Gaps = 6/308 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKG
Sbjct: 74 IIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKG 133
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EI++ LI+G ID AVHS K +PT L + + LPRED+RD FI TA +L +L
Sbjct: 134 LFTKEIDEALINGHIDIAVHSMKYVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELP 193
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 194 AGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSM 253
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LD
Sbjct: 254 TENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLD 313
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRF 298
GSC++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 314 GSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLS 373
Query: 299 ISNKNVFN 306
+ F
Sbjct: 374 RAGPGFFG 381
>gi|229918358|ref|YP_002887004.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b]
gi|259647797|sp|C4L4J6|HEM3_EXISA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229469787|gb|ACQ71559.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b]
Length = 305
Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats.
Identities = 97/303 (32%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LA+ L + I + TKGD+I + L+++GGKGL
Sbjct: 2 RKIIVGSRRSQLAMTQTKWVIEQLKQAGA--TNEFEIKEIVTKGDQIVDVQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+++++ G+ID AVHS KD+P +L + L IS R D RDV I + + L
Sbjct: 60 FVKEIQQQMLDGDIDFAVHSMKDVPAELPEELYISCMPKRVDARDVLICENGYTFETLPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR A +L R D+ + RG I+TRL KL++ +AILLA AG++R+
Sbjct: 120 GSIVGTSSLRRGAQILAARPDLEIQWIRGNIDTRLKKLDSENYNAILLAKAGLERMGWTD 179
Query: 184 V-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E L+ + P+ GQG + IE+ ++ + ++++++ + T + ER FL ++G
Sbjct: 180 RVDFEALDPDVMVPAVGQGVLAIESRKDDAEVTTVLQLLHDDVTAKAATAERTFLKAIEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC + G+A G + G++ + DGK V++ D + +G+ A+ + +
Sbjct: 240 SCHVPVGGYATVNGDDVTLTGLIASVDGKEVLRVTKT--STDGVALGQAVAEELLGRGGR 297
Query: 303 NVF 305
+
Sbjct: 298 EIL 300
>gi|87117998|gb|ABD20306.1| HemC [Shigella dysenteriae]
gi|87118030|gb|ABD20322.1| HemC [Shigella flexneri]
gi|87118032|gb|ABD20323.1| HemC [Shigella flexneri]
Length = 272
Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|119386338|ref|YP_917393.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222]
gi|166217779|sp|A1B853|HEM3_PARDP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119376933|gb|ABL71697.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222]
Length = 313
Score = 354 bits (910), Expect = 7e-96, Method: Composition-based stats.
Identities = 130/305 (42%), Positives = 179/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LALA A ETR LM H + I+ + T GDR+ +R L EIGGKG
Sbjct: 8 QNPIRIGTRGSALALAQAHETRDRLMAAHGLAADAFRIVVIKTTGDRVLDRPLKEIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE L++ EID AVHS KDMPT +GL I YLPRED+RD F+S ++ +L
Sbjct: 68 LFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+G+SSLRR+A L R D+ +++FRG ++TRL KL + A A LA AG+ RL
Sbjct: 128 QGAVVGSSSLRRRAQLAARRPDLKLVEFRGNVQTRLKKLEDGVAVATFLAMAGLTRLGML 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + + ++ P+ QG I +E ++ + L+ I+ D+ V ERAFLA LDG
Sbjct: 188 HVARGAVEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRDSALRVTAERAFLARLDG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A +G L G +L DG R G D +G D A+ +R +
Sbjct: 248 SCQTPIAGLAELQGDRLRLRGEILRPDGSEVIAAERVGPAADGAAMGTDLAEELRGRAPA 307
Query: 303 NVFNF 307
+ F++
Sbjct: 308 DFFDW 312
>gi|56476047|ref|YP_157636.1| porphobilinogen deaminase [Aromatoleum aromaticum EbN1]
gi|56312090|emb|CAI06735.1| Porphobilinogen deaminase [Aromatoleum aromaticum EbN1]
Length = 314
Score = 354 bits (910), Expect = 7e-96, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 153/300 (51%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF
Sbjct: 13 LVIATRESRLALWQAEHVKARLEALY--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P +L + + RE D F+S SL D+ +
Sbjct: 71 KELEAALLEERADIAVHSMKDVPMQLAEPFALPCISAREVPLDAFVSPRYASLADMPPGT 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG++RL I
Sbjct: 131 VVGTSSLRRESQLHAQFPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLRRLGLADRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE + +N DT V ERA L GSC+
Sbjct: 191 RAELPSEVSLPAAGQGALGIECLAKRTDIAAWLAPLNDADTSACVRAERAVARALAGSCE 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + L+ G V DG R G+ DA +G A +R +++
Sbjct: 251 VPLGAYAEIRAGRLWLRGFVALPDGSRMVRAEREGDAADAEGLGLALADDLRAQGAEDIL 310
>gi|87117964|gb|ABD20289.1| HemC [Shigella boydii]
gi|87117966|gb|ABD20290.1| HemC [Shigella boydii]
gi|87117982|gb|ABD20298.1| HemC [Shigella boydii]
gi|87117986|gb|ABD20300.1| HemC [Shigella boydii]
gi|87117990|gb|ABD20302.1| HemC [Shigella boydii]
gi|87117994|gb|ABD20304.1| HemC [Shigella boydii]
gi|87118012|gb|ABD20313.1| HemC [Shigella dysenteriae]
Length = 272
Score = 354 bits (910), Expect = 7e-96, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|168034136|ref|XP_001769569.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679111|gb|EDQ65562.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 135/306 (44%), Positives = 186/306 (60%), Gaps = 4/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGL
Sbjct: 56 VRIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALDIVIIKTTGDKILSQPLADIGGKGL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L
Sbjct: 116 FTKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPKYSSLAELPE 175
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ LL + V++FRG ++TRL KLN A LLA AG+KRL +
Sbjct: 176 GSVVGSASLRRQSQLLHRYPHLQVVNFRGNVQTRLRKLNEGVCAATLLALAGLKRLDMTE 235
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I IL +D P+ QGAI I + K +E + +NHEDT +++CERAFLA+LDGS
Sbjct: 236 HITAILETDDMLPAIAQGAIGIACRTGDTKMEEYLASLNHEDTRLAISCERAFLAKLDGS 295
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301
C++ IAG A F G+V +DGK E SR G + D I + +DA Q + +
Sbjct: 296 CRTPIAGLAQRTEDGCLFRGLVATTDGKQVLETSRTGSFSYDDMIALAQDAGQELISRAG 355
Query: 302 KNVFNF 307
F +
Sbjct: 356 PGFFQW 361
>gi|317402904|gb|EFV83446.1| HemC protein [Achromobacter xylosoxidans C54]
Length = 314
Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 153/301 (50%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF
Sbjct: 7 LVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVH KDMP + ++ A L R D RD F+S+ +L DL +
Sbjct: 65 KELETALLDGRADLAVHCLKDMPVDMQAPFELCAVLDRADPRDAFVSNRYATLADLPAGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL I
Sbjct: 125 VVGTSSLRRESQIRARYPQLLVKPLRGNLDTRLGKLDRGEYDAIVLAAAGLNRLGLTDRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+ + P+ GQGA+ IE + + + +N ERA L GSC+
Sbjct: 185 SSLLDPAESLPAAGQGALTIEIRDDRDDMRAWLAPLNDAGATSISLAERAVSRRLGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A TL +V + DG +G A IG A + + +
Sbjct: 245 VPLAAYAEIADDTLTLRALVASPDGTRMLRAHGSGPVAQAQAIGEAVAAELFDAGAQAIL 304
Query: 306 N 306
+
Sbjct: 305 D 305
>gi|145588841|ref|YP_001155438.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047247|gb|ABP33874.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 325
Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I +R L+++GGKGLF
Sbjct: 20 LVIASRESRLAMWQAEHVRDCLKSLY--PQCDVQILGMTTRGDQILDRALSKVGGKGLFV 77
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G AVHS KD+P + +G ++ + RED RD F+S+ SL++L +
Sbjct: 78 KELETALEDGRAHLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEELPKGA 137
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V RG ++TR+ KL+ + AI+LA AG+KRL E I
Sbjct: 138 VVGTSSLRREAVLRAKFPHLEVHPLRGNLDTRMGKLDRGEYQAIILAAAGLKRLGLESRI 197
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + + P+ GQGA+ IET +P + + +N T +V+ ER +L GSC+
Sbjct: 198 RAYLPYDPYTPAAGQGALGIETLSKHPSIKHWLAPLNDLPTLLAVSAERMVSRQLGGSCE 257
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302
+A A + + V + DGK G +A +G AQ +
Sbjct: 258 VPLAAHAVWDNNQMNIRSFVASVDGKAICLADGVGQVHTIEEAEALGLAVAQDLLAQGAA 317
Query: 303 NVF 305
++
Sbjct: 318 DLI 320
>gi|223044144|ref|ZP_03614183.1| porphobilinogen deaminase [Staphylococcus capitis SK14]
gi|222442538|gb|EEE48644.1| porphobilinogen deaminase [Staphylococcus capitis SK14]
Length = 309
Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKKV--DPDLDIEIKEIVTKGDQIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L
Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ +
Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+DG
Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDG 239
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A G + F G+++ DGK +E + G D + +G++ ++ ++
Sbjct: 240 SCQVPIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|187478790|ref|YP_786814.1| porphobilinogen deaminase [Bordetella avium 197N]
gi|115423376|emb|CAJ49910.1| porphobilinogen deaminase [Bordetella avium 197N]
Length = 314
Score = 354 bits (909), Expect = 9e-96, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 159/300 (53%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L D++ P + ++ L+T+GD+I +R+L+++GGKGLF
Sbjct: 7 LVIATRASRLALWQAEHVRDRLRDLY--PACAVELLTLTTRGDQILDRSLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + +S L R D RD F+S SL L + +
Sbjct: 65 KELEHALLDGRADLAVHSLKDVPVDIQAPFALSTVLERADPRDAFVSARYASLDALPVGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A + R D+ V RG ++TRL KL+ + A++LA AG++R+ I
Sbjct: 125 VVGTSSLRREAQIRAARPDLVVRPLRGNLDTRLGKLDRGEYDAVVLAAAGLERIGYGDRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ GQGA+ IE + + + ++ T V+ ERA L GSC+
Sbjct: 185 RARLAPAQSLPAAGQGALGIEIRDDRDDMRAWLAPLSDASTTACVSAERAVSRALGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +A G TL +V + DG+ SR G +A ++G A + +
Sbjct: 245 VPIGAYAELHGQTLRIDALVASPDGRRILRASRLGPVAEADSLGMAVAHDLLAQGGDAIL 304
>gi|126740632|ref|ZP_01756319.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6]
gi|126718433|gb|EBA15148.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6]
Length = 319
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 131/307 (42%), Positives = 180/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG
Sbjct: 11 PLKIGTRGSPLALAQAYETRARLAKAFDLPQEAFEIVVIKTTGDNQALIAADKPLKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D
Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVLQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 131 LAAGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLEDGVAECTFLAMAGLNRLA 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V + D P+ QGAI IE ++ + +++ I+ + T + ERAFLA L
Sbjct: 191 MESVPATAIETTDMLPAVAQGAIGIERRSDDSRVAAMLEAIHDKATGQRLAAERAFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G TL G VL DG ++ D +GRD A + +
Sbjct: 251 DGSCETPIAGLAELDGGTLRMRGEVLRPDGSEAIAEDQSCAIEDGAALGRDMAAKLLDQA 310
Query: 301 NKNVFNF 307
+ F++
Sbjct: 311 GPSFFDW 317
>gi|332968975|gb|EGK08019.1| hydroxymethylbilane synthase [Kingella kingae ATCC 23330]
Length = 312
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A ++ L ++ P I I+ ++T+GD+I ++TL++IGGKGL
Sbjct: 5 KKLTIASRESALAMWQARHIQAQLQALY--PDCQIDILGMTTQGDQILDKTLSKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L D AVHS KD+P L +G + A R + D F+S+ L+DL
Sbjct: 63 FIKELETALQENRADLAVHSIKDVPMDLPEGFALVAIGERANPFDAFVSNQYARLEDLPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ +
Sbjct: 123 GAIVGTSSLRREAQLRARFPHLNIKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L+ D P+ GQGA+ IE + + + +NH T V ERA L GS
Sbjct: 183 RIRSVLSPADSLPAAGQGALGIEIAAHRADLVQTLLPLNHAKTAACVTAERALARALGGS 242
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ +A + L +G+V DG + V A +GR A+ + K
Sbjct: 243 CQVPLAAYCTADDNGVLTLHGLVAHPDGSVMLTVQAQAPAEYADALGRAVAKKLADDGAK 302
Query: 303 NVF 305
+V
Sbjct: 303 DVI 305
>gi|319892715|ref|YP_004149590.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162411|gb|ADV05954.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius
HKU10-03]
Length = 309
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 175/305 (57%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKGL
Sbjct: 2 RKLIVGSRRSQLALTQSQQFIDRLKEV--DPTLDIEIKEIVTKGDQIVDRQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + +ID A+HS KD+P++L +GL + RE+ D FIS L +L
Sbjct: 60 FVKEIQNELFNRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELPD 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ +
Sbjct: 120 GSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++G
Sbjct: 180 DIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMNG 239
Query: 243 SCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A K T + F G++++ DGK E + +G D I +G + ++ ++
Sbjct: 240 SCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSG--QDPIQVGSEVSRVLKSQGA 297
Query: 302 KNVFN 306
+
Sbjct: 298 DKIIQ 302
>gi|87118000|gb|ABD20307.1| HemC [Shigella dysenteriae]
gi|87118002|gb|ABD20308.1| HemC [Shigella dysenteriae]
gi|87118004|gb|ABD20309.1| HemC [Shigella dysenteriae]
Length = 272
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 98/267 (36%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPDISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|120602319|ref|YP_966719.1| porphobilinogen deaminase [Desulfovibrio vulgaris DP4]
gi|158513905|sp|A1VCX6|HEM3_DESVV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120562548|gb|ABM28292.1| hydroxymethylbilane synthase [Desulfovibrio vulgaris DP4]
Length = 315
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 158/304 (51%), Gaps = 2/304 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A +S + H ++ + + TKGD I + L ++GGKGL
Sbjct: 2 KHLVIATRGSKLALWQAEHIKSLIETEHAG-KVDVSLKIIKTKGDIILDVPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L
Sbjct: 61 FVKEIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPH 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL
Sbjct: 121 GARVGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLSA 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G
Sbjct: 181 PHHEVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGG 240
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG A G G+V G+ + G +A N G + A +
Sbjct: 241 CQVPIAGHAVMTGDDDFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQVLADGAA 300
Query: 303 NVFN 306
+ +
Sbjct: 301 EILD 304
>gi|325981153|ref|YP_004293555.1| porphobilinogen deaminase [Nitrosomonas sp. AL212]
gi|325530672|gb|ADZ25393.1| porphobilinogen deaminase [Nitrosomonas sp. AL212]
Length = 318
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A + L +++ P I I+ ++T+GD+I +++L++IGGKGL
Sbjct: 9 KKIVIASRESLLAMWQAKFIQKCLSELY--PQTEISILGMTTRGDQILDQSLSKIGGKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KDMP + +G +++A RED RD F+S+ SL L
Sbjct: 67 FIKELEQALEDGRADIAVHSMKDMPMNVPEGFKLAAITEREDPRDAFVSNHHASLDVLPA 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR++ L + V RG ++TRL KL+ ++ AI+LA AG+KRL+
Sbjct: 127 GSIVGTSSLRRESQLRAHFPLLQVQPLRGNVQTRLRKLDEDQYAAIILAAAGLKRLELSN 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I +LN E P+ GQGA+ IE + +L++ ++H+ T V ER+ L GS
Sbjct: 187 RITALLNPEQSLPAVGQGALGIECRADRMDLIQLMQPLHHQATAYCVEAERSMSRVLGGS 246
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + FA L G V DGK + G I +G+ AQ +
Sbjct: 247 CQVPLGAFAEIDNDKLRLRGFVAQPDGKRIVSGALEGKPETGIAMGQQLAQKLIKKGADE 306
Query: 304 VF 305
+
Sbjct: 307 IL 308
>gi|46580299|ref|YP_011107.1| porphobilinogen deaminase [Desulfovibrio vulgaris str.
Hildenborough]
gi|55976453|sp|Q72AV0|HEM3_DESVH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46449716|gb|AAS96366.1| porphobilinogen deaminase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233718|gb|ADP86572.1| porphobilinogen deaminase [Desulfovibrio vulgaris RCH1]
Length = 315
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 158/304 (51%), Gaps = 2/304 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A +S + H ++ + + TKGD I + L ++GGKGL
Sbjct: 2 KHLVIATRGSKLALWQAEHIKSLIETEHAG-KVDVSLKIIKTKGDIILDVPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L
Sbjct: 61 FVKEIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPH 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL
Sbjct: 121 GARVGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLAA 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G
Sbjct: 181 PHHEVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGG 240
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG A G G+V G+ + G +A N G + A +
Sbjct: 241 CQVPIAGHAVMTGDDNFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQVLADGAA 300
Query: 303 NVFN 306
+ +
Sbjct: 301 EILD 304
>gi|87117974|gb|ABD20294.1| HemC [Shigella boydii]
gi|87117976|gb|ABD20295.1| HemC [Shigella boydii]
gi|87117978|gb|ABD20296.1| HemC [Shigella boydii]
gi|87117980|gb|ABD20297.1| HemC [Shigella boydii]
gi|87117984|gb|ABD20299.1| HemC [Shigella boydii]
gi|87117988|gb|ABD20301.1| HemC [Shigella boydii]
gi|87117992|gb|ABD20303.1| HemC [Shigella boydii]
gi|87117996|gb|ABD20305.1| HemC [Shigella boydii]
gi|87118006|gb|ABD20310.1| HemC [Shigella dysenteriae]
gi|87118010|gb|ABD20312.1| HemC [Shigella dysenteriae]
gi|87118016|gb|ABD20315.1| HemC [Shigella dysenteriae]
gi|87118020|gb|ABD20317.1| HemC [Shigella dysenteriae]
gi|87118036|gb|ABD20325.1| HemC [Shigella flexneri]
gi|87118042|gb|ABD20328.1| HemC [Escherichia coli]
gi|87118044|gb|ABD20329.1| HemC [Escherichia coli]
Length = 272
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|33597222|ref|NP_884865.1| porphobilinogen deaminase [Bordetella parapertussis 12822]
gi|33601068|ref|NP_888628.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50]
gi|39931443|sp|Q7W785|HEM3_BORPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|39931458|sp|Q7WKM1|HEM3_BORBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33573649|emb|CAE37934.1| porphobilinogen deaminase [Bordetella parapertussis]
gi|33575503|emb|CAE32581.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50]
Length = 314
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 157/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF
Sbjct: 7 LTIATRASRLALWQAEHVRDLLRA--RYPACSVELLTLTTRGDQILDRTLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL +
Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I
Sbjct: 125 AVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L D P+ GQGA+ IE + ++ + T V ERA L GSC+
Sbjct: 185 RALLEPADSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A G L +V A DG+ R G R A IG AA+ + +
Sbjct: 245 VPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>gi|194707246|gb|ACF87707.1| unknown [Zea mays]
gi|223947939|gb|ACN28053.1| unknown [Zea mays]
Length = 356
Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats.
Identities = 131/306 (42%), Positives = 183/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300
C++ IA +AY F G++ + DG E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|86609244|ref|YP_478006.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557786|gb|ABD02743.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 310
Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LAL L + H P + + LST+GD I + L +IG KGLFT
Sbjct: 1 MRIASRKSELALVQTQWVMGQLQEHH--PGLPLELNTLSTQGDIILDVALAKIGDKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLA 122
+E+E L++G D AVHS KD+PT+L +GL + A RED D + L L
Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITRREDPLDALVVGEKFRDYRLATLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L + D RG + TRL KL + ++LA AG+KRL K
Sbjct: 119 EGTVIGTSSLRRLAQLRHAFPHLHFKDVRGNLNTRLAKLERGEYDGLILAVAGLKRLGKA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G
Sbjct: 179 DRIHEVLDPGVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + +G L+ G+V DG+ ++ G+ D +G A+ ++
Sbjct: 239 GCQVPIGVHSQVQGEALHLTGMVADLDGRRLIRDTQTGSTADPEAVGMALAEKLKQQGAD 298
Query: 303 NVFN 306
+
Sbjct: 299 EILQ 302
>gi|323464250|gb|ADX76403.1| porphobilinogen deaminase [Staphylococcus pseudintermedius ED99]
Length = 309
Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 175/305 (57%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKGL
Sbjct: 2 RKLIVGSRRSQLALTQSQQFIDRLKEV--DPTLDIEIKEIVTKGDQIVDRQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L S +ID A+HS KD+P++L +GL + RE+ D FIS L +L
Sbjct: 60 FVKEIQNELFSRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELPD 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ +
Sbjct: 120 GSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++G
Sbjct: 180 DIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMNG 239
Query: 243 SCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A K T + F G++++ DGK E + +G D I +G + ++ ++
Sbjct: 240 SCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSG--QDPIQVGSEVSRVLKSQGA 297
Query: 302 KNVFN 306
+
Sbjct: 298 DKIIQ 302
>gi|387506|gb|AAA39890.1| porphobilinogen deaminase (housekeeping) [Mus musculus]
Length = 400
Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats.
Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 58 RVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+
Sbjct: 116 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLET 175
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 176 LPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 235
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 236 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 295
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 296 LEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 355
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 356 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 392
>gi|295317399|ref|NP_001171279.1| porphobilinogen deaminase isoform 1a [Felis catus]
gi|289191079|gb|ADC93652.1| hydroxymethylbilane synthase housekeeping form 1a [Felis catus]
Length = 361
Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATICVTAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRQAQLAAENLGISLASLLLNKGAKNILDV 353
>gi|87117968|gb|ABD20291.1| HemC [Shigella boydii]
Length = 272
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 100/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
I TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 IGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|163737211|ref|ZP_02144629.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107]
gi|161389815|gb|EDQ14166.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107]
Length = 320
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L
Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A +G TL G VL DG + D +GR+ A + +
Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGSEAISDEQTCPVEDGAELGREMAAKLLAQA 311
Query: 301 NKNVFNF 307
F++
Sbjct: 312 GAGFFDW 318
>gi|87117970|gb|ABD20292.1| HemC [Shigella boydii]
gi|87118022|gb|ABD20318.1| HemC [Shigella flexneri]
gi|87118024|gb|ABD20319.1| HemC [Shigella flexneri]
gi|87118026|gb|ABD20320.1| HemC [Shigella flexneri]
gi|87118028|gb|ABD20321.1| HemC [Shigella flexneri]
gi|87118034|gb|ABD20324.1| HemC [Shigella flexneri]
gi|87118038|gb|ABD20326.1| HemC [Shigella flexneri]
gi|87118040|gb|ABD20327.1| HemC [Shigella flexneri]
Length = 272
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|256828337|ref|YP_003157065.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028]
gi|256577513|gb|ACU88649.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028]
Length = 311
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LAL A L + P + + + TKGD+I + L +IGGKGLF
Sbjct: 3 TIRIATRGSKLALWQAHHISGLLRA--QYPGMTVELNIIKTKGDKILDVPLAKIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L++ E D AVHS KD+P +L +GL++ RE D F+S + L
Sbjct: 61 VKEIEEALLADEADIAVHSMKDVPAQLPEGLKLGIIPEREQPTDSFLSVNYPDIASLPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+ L+ R D+ ++ RG ++TR+ KL + AI++A AG+ RL+
Sbjct: 121 ARVGTSSLRRQTQLMGLRRDLCILSLRGNLDTRVGKLMAGEFDAIIVATAGMNRLELSAP 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L F P+ QGA+ IE + P+ EL+ ++H + V ER+FL LDG C
Sbjct: 181 HMQELAPPMFYPAVAQGALGIEYRADRPQLDELLAFLDHAPSKICVEAERSFLFGLDGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG+A G+ + G+V G+ A+ +G A+ + K +
Sbjct: 241 QVPIAGYATLSGTEITLTGLVADLCGERVIRRQATALSHAAVELGAQVAKAVLADGGKEI 300
Query: 305 FN 306
+
Sbjct: 301 LD 302
>gi|270158066|ref|ZP_06186723.1| porphobilinogen deaminase [Legionella longbeachae D-4968]
gi|289163669|ref|YP_003453807.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150]
gi|269990091|gb|EEZ96345.1| porphobilinogen deaminase [Legionella longbeachae D-4968]
gi|288856842|emb|CBJ10653.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150]
Length = 310
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A R L ++K P NI ++P++T GD+ L +GG
Sbjct: 1 MNSRIIRIATRQSPLALWQANYVRQLL--LNKWPKLNIELLPMTTSGDKFLKDKLLAVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS+KDMP + GL ++A R++ D +SH SL+
Sbjct: 59 KGLFVKELEEALLDKRADFAVHSSKDMPAEFPHGLCLAAICKRDNPFDALVSHHYTSLQT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++IGT+SLRR++ LL +RSD+ V RG I TRL KL + AI+LA +G++R+
Sbjct: 119 LPERAIIGTASLRRQSQLLAYRSDLCVKPLRGNINTRLEKLRAGEYQAIILAASGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
VI E L E P+ GQGA+ IE ++ + LV +N + V+ ER A+L
Sbjct: 179 FTHVITEQLPTEIMLPACGQGALAIECRTDDQETLALVAELNDPISSLCVHTERQVNAQL 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C +A F + + L +L DG ++ G+ A N+ +Q +
Sbjct: 239 GGNCHIPLAVFCTPIEKNQLLLQAKILTIDGSQTIADTQMGSFAQATNMADRCSQSLIAQ 298
Query: 300 SNKNVF 305
N+
Sbjct: 299 GAANLL 304
>gi|163740378|ref|ZP_02147772.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10]
gi|161386236|gb|EDQ10611.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10]
Length = 320
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L
Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A +G TL G VL DG + D +GR+ A + +
Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGSEAISDEQTCPVEDGAELGREMATKLLAQA 311
Query: 301 NKNVFNF 307
F++
Sbjct: 312 GAGFFDW 318
>gi|302879710|ref|YP_003848274.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2]
gi|302582499|gb|ADL56510.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2]
Length = 317
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + +L++IGGKGLF
Sbjct: 15 LVIASRESALAMWQAEHIRDRLRALY--PQTDVSILGMTTQGDQILDVSLSKIGGKGLFV 72
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L +G ++A RED D F+S+ ++L L S
Sbjct: 73 KELETALEDGRADFAVHSLKDVPMVLPEGFVLAAIGEREDPHDAFVSNNYENLAALPAGS 132
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L + + RG ++TRL KL+ AI+LA AG+KRL I
Sbjct: 133 VVGTSSLRRESQLRARFPHLVIEPLRGNVQTRLRKLDEGLYAAIILAAAGLKRLGLATRI 192
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +++ ED P+ GQGA+ IE + ++ ++H DT V ERA L+GSC+
Sbjct: 193 RAVISSEDSLPAVGQGALGIECRADRLDVIAALQPLHHPDTAACVFAERAMSRALNGSCQ 252
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ GFA + L G V + DG+ G +G A+ + +
Sbjct: 253 VPLGGFAEVQNGQLRMRGFVASPDGQRVIRAEAMGEIAAPEALGGQIAKSLLAQGAGEIL 312
>gi|258404816|ref|YP_003197558.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692]
gi|257797043|gb|ACV67980.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692]
Length = 311
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 154/303 (50%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I TR S LAL A + L + + P + + + T+GD+I + L +IGGK L
Sbjct: 2 RSLTIATRGSKLALWQANHIKGRLEE--RYPGIEVHLEVIKTQGDKILDVPLAKIGGKAL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ G D AVHS KD+P +L +GL + RED D +S +L+++
Sbjct: 60 FVKEIEEAMLDGRADLAVHSMKDVPAELPEGLTLGVIPQREDYTDCLLSQHYTTLEEIPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRRK LLR R D+ + D RG ++TR+ KL AI++A AG++RL+
Sbjct: 120 GATIGTSSLRRKTQLLRLRPDLVIQDLRGNLDTRIRKLEEGMFDAIVVASAGLRRLQTGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L F P+ GQGA+ IE + +E++ ++H T V ERAFL L+G
Sbjct: 180 RYMTELAPPQFLPAVGQGALGIEYPEDRKDLEEMLGFLDHPPTRFCVLTERAFLHRLEGG 239
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I G A + + L+ V G+ D + +G+ A I
Sbjct: 240 CQVPIGGHAVMSESNKLHLDCFVADLHGQQCLRREGEAKPKDGVALGQRLADDILASGGA 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|87118018|gb|ABD20316.1| HemC [Shigella dysenteriae]
gi|87118046|gb|ABD20330.1| HemC [Escherichia coli]
Length = 272
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 98/267 (36%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G +A +G A+ +
Sbjct: 246 IRGERRGAPQNAEQMGISLAEELLNNG 272
>gi|94264595|ref|ZP_01288379.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1]
gi|93454949|gb|EAT05186.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1]
Length = 311
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 2/283 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A + + H P + ++ + TKGD+I + L ++GGKGLF
Sbjct: 5 IRIGTRASMLALAQANWIKGRIEAQH--PQCRVELVKIITKGDKIVDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ GE+D AVHS KD+P +L +GL I RE+ D F+S+ Q+++ L +
Sbjct: 63 KEIEEAMLRGEVDIAVHSMKDVPAELPQGLHIGIITQRENPFDAFVSNLYQNIEALPTGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRK+ L R D+++ D RG ++TRL KL+ + I+LA AG+ RL
Sbjct: 123 RVGTSSLRRKSQLAALRPDLTIEDLRGNLDTRLRKLDEGQYDGIILAAAGLNRLDLAHRA 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E P+ QGA+ IE + E++ ++H T +V ERA+L L+G C+
Sbjct: 183 TFYFQAEQMLPAVAQGAVGIELRRADADLLEMLSFMDHRATTLAVKAERAYLKRLEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
+AGFA G L +V A DG +VS++G +A I
Sbjct: 243 VPLAGFATLDGDRLQLDTLVAAIDGSRLLKVSKSGPAEEAEEI 285
>gi|295317401|ref|NP_001171280.1| porphobilinogen deaminase isoform 2a [Felis catus]
gi|289191083|gb|ADC93654.1| hydroxymethylbilane synthase erythroid form 2a [Felis catus]
gi|289191085|gb|ADC93655.1| hydroxymethylbilane synthase erythroid form 2b [Felis catus]
Length = 344
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATICVTAQHEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPRQAQLAAENLGISLASLLLNKGAKNILDV 336
>gi|303326737|ref|ZP_07357179.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3]
gi|302862725|gb|EFL85657.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3]
Length = 310
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 158/305 (51%), Gaps = 3/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K I TR S LAL A +S L + P + + + TKGD I + L+++GGKG
Sbjct: 2 RKHLVIATRGSRLALWQAEHVKSRLEA--QDPGLTVSLNVIKTKGDIILDVPLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P L +GL + RE D F+S L
Sbjct: 60 LFVKEIEEALLDGRADLAVHSIKDVPMVLPEGLILGCVPQREACTDCFLSVHYADPDALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A LL R D+ + RG ++TRL KL N + AI+LA AG+ RL
Sbjct: 120 QKAHVGTSSLRRQAQLLSMRPDLRISSLRGNVDTRLRKLQNGEYDAIILASAGLNRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L+ E F P+ GQGA+ IE +N L+ + + T V+ ER FLA L+G
Sbjct: 180 APYMAPLDPERFLPAVGQGALGIECREDNYDLLVLLASLENRATRVCVDAERGFLAGLEG 239
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG A T+ G+V DG + +NGN DA +G + A +
Sbjct: 240 GCQVPIAGHARLVDEETVSLKGLVAEVDGSLILRGEKNGNAADARALGLELAGELLNKGG 299
Query: 302 KNVFN 306
+ +
Sbjct: 300 RAILE 304
>gi|93004929|ref|YP_579366.1| porphobilinogen deaminase [Psychrobacter cryohalolentis K5]
gi|92392607|gb|ABE73882.1| hydroxymethylbilane synthase [Psychrobacter cryohalolentis K5]
Length = 345
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 103/330 (31%), Positives = 168/330 (50%), Gaps = 31/330 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR SPLAL A R+ L+ ++ P I ++ + TKGD+I + L +IGGKGLF
Sbjct: 11 TLNIATRQSPLALWQAEHIRNRLLALY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L
Sbjct: 69 VKELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIAELPQG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT+SLRR+ + +R D+ + RG + TRL+KL+ + AI+LA +G+KR++ +
Sbjct: 129 AVVGTASLRRQCQIKAYRPDLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLKRIELDAR 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L+I P+ GQGA+ IE ++ +L+ +N + + ERA L G C
Sbjct: 189 IRSELDINICLPAVGQGALAIECREDDADVLKLLAPLNDDKARIRLIAERALNRHLQGGC 248
Query: 245 KSAIAGFAYCKGS---------------------TLYFYGIVLASDGKIFHEV----SRN 279
+ IA +A + + TL+ G V DG +V +
Sbjct: 249 QVPIAAYAVLQKADALAADNDSNDNDNGNNDAGDTLWLRGRVGQEDGSELLKVDKRQTLT 308
Query: 280 GNRCD----AINIGRDAAQYIRFISNKNVF 305
G++ + A +G + A+ + +
Sbjct: 309 GSQAEQEAQANQLGIEVAEMLLQAGAGEIL 338
>gi|87118008|gb|ABD20311.1| HemC [Shigella dysenteriae]
gi|87118014|gb|ABD20314.1| HemC [Shigella dysenteriae]
Length = 272
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 146/267 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE + + +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLGDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|261364223|ref|ZP_05977106.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996]
gi|288567837|gb|EFC89397.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996]
Length = 311
Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQAHAQAPAAYAEALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIE 304
>gi|314933825|ref|ZP_07841190.1| hydroxymethylbilane synthase [Staphylococcus caprae C87]
gi|313653975|gb|EFS17732.1| hydroxymethylbilane synthase [Staphylococcus caprae C87]
Length = 309
Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIYKLKKV--DPDLDIEIKEIVTKGDQIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L
Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ +
Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+DG
Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDG 239
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A G + F G+++ DGK +E + G D + +G++ ++ ++
Sbjct: 240 SCQVPIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|268679946|ref|YP_003304377.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946]
gi|268617977|gb|ACZ12342.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946]
Length = 314
Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 162/304 (53%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + ++ L H P + + + TKGD+I + L +IGGKGL
Sbjct: 2 KKLIIATRGSKLALWQSEHVKAELEKAH--PHLAVELSIMMTKGDKILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ ++ GE AVHS KD+P + +GL++ RED+RD +S L+DL
Sbjct: 60 FTKELEEAMLRGEAHIAVHSLKDVPMEFPEGLKLGVITKREDVRDAMLSEKYGCLEDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR+ LL+ R D + + RG + TR+ KL + AI+LA AGIKRL ++
Sbjct: 120 GAVVGTTSLRRRMQLLKLRPDFVIKNLRGNVNTRIRKLKEGEFDAIILASAGIKRLGLQE 179
Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ I E P+ GQ A+ IE V+N + + LV V+ ED ER F+ L+
Sbjct: 180 EVRYFTPISKEVMIPASGQAALGIEI-VDNAEVERLVSVLKDEDAMIETRVERDFVTLLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A +L+ I+ DG +G R + +G+ AQ +
Sbjct: 239 GGCQVPIGVNAEVTQESLHVKAILGLPDGSQMMCEVMSGKREEFETLGKVLAQKVIDKGA 298
Query: 302 KNVF 305
K +
Sbjct: 299 KELL 302
>gi|94311681|ref|YP_584891.1| porphobilinogen deaminase [Cupriavidus metallidurans CH34]
gi|93355533|gb|ABF09622.1| hydroxymethylbilane synthase [Cupriavidus metallidurans CH34]
Length = 334
Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 21 KLVIASRESRLAMWQAEHVRAALQQYY--PSCDVSILGMTTRGDQILDRTLSKVGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E + G D AVHS KD+P +L +G ++A + RED RD +S SL+++
Sbjct: 79 VKELEVAMSEGRADLAVHSLKDVPMELPEGFTLTAVMEREDPRDALVSAQFASLEEMPAG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 139 TVVGTSSLRREAALRSRFPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDR 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE + P+ E + +NH T +V+ ERA L GSC
Sbjct: 199 IRALIAPESSLPAAGQGALGIEIRADRPELAEWLAPLNHLPTLLAVSAERAVSRRLGGSC 258
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + ++L V DG G DA +G A +
Sbjct: 259 QVPLAAHARWRDASLQLDAFVALPDGSRQVRAHATGPVATVADAEALGTAVAGDLLAQGA 318
Query: 302 KNVF 305
V
Sbjct: 319 DGVL 322
>gi|328952141|ref|YP_004369475.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109]
gi|328452465|gb|AEB08294.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109]
Length = 311
Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 164/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LALA A + + + P + + + T GD+I + L +IGGKG
Sbjct: 2 KNHLRIGTRGSALALAQAAWVQQQIQ--GRYPQITVDLEIIKTTGDKIQDVALAKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE ++SGE+D VHS KD+PT++ GL I RED RD FIS +SL ++
Sbjct: 60 LFTKEIEMAILSGEVDLGVHSMKDVPTEIPLGLVIGITTVREDPRDAFISRKYRSLAEIP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L IGT SLRR+A LL R D+ ++ RG ++TRL KL AI+LA AG+ RL +
Sbjct: 120 LGGRIGTGSLRRRAQLLHLRPDLEIVPLRGNVDTRLRKLTEADLDAIILAAAGLHRLGRA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I IL P+ GQGA+ +E ++ EL++ ++ +T +V ERAFLA L+G
Sbjct: 180 AEITAILPETQMLPAIGQGALGLEYRQDDAVTMELLEFLDDPETRVAVAAERAFLARLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA K L+ G++ G + + A ++G+ A+ +
Sbjct: 240 GCQVPIAAMGTLKKGELFLDGLIGDLAGSRIYREQLSRPPAAAADLGQQLAETLLKRGGA 299
Query: 303 NVF 305
+
Sbjct: 300 QIL 302
>gi|83594897|ref|YP_428649.1| porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170]
gi|83577811|gb|ABC24362.1| Porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170]
Length = 321
Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 126/313 (40%), Positives = 175/313 (55%), Gaps = 7/313 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIG 59
EK RIGTR SPLALA + R L+ + + I + T GD I +R L+E+G
Sbjct: 6 EKSKLRIGTRGSPLALAQTHQVRDLLIAANPDLGEPGAVTIEVIKTTGDAILDRPLSELG 65
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT EI+ +++G ID AVHS KD+PT L G+ + L RED+RD F+ L
Sbjct: 66 GKGLFTREIDDAMLAGTIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAFLGRDHARLA 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL SV+GT+SLRR A +L R DI VI FRG ++TRL+KL +A A +LA AG+ RL
Sbjct: 126 DLPEGSVVGTASLRRGAQILAMRPDIKVISFRGNVQTRLDKLARGEADATMLAIAGLNRL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+L I++ P+ QGA+ + + A + +NH T V ERAFL
Sbjct: 186 GMADKASSVLEIDEMLPAVAQGAVGVTCRAGDETAHRWLAPLNHRATQLCVEIERAFLTR 245
Query: 240 LDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
LDGSC++ I G A K T++F G+++ +DGK+ H+ +R G D I +G DA
Sbjct: 246 LDGSCRTPIGGLARLKRVEDPSGTVFFRGMIIRTDGKVIHQTTREGLAADGIALGDDAGA 305
Query: 295 YIRFISNKNVFNF 307
+ + F
Sbjct: 306 ELLAKAGPGFFQV 318
>gi|110598700|ref|ZP_01386964.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031]
gi|110339694|gb|EAT58205.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031]
Length = 313
Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 118/307 (38%), Positives = 171/307 (55%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKTEL--SRHFPELDIKLKLVKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS LK+L
Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTGTPEGLIITSFTEREDTRDVIISKGGVKLKELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ + TSSLRR + LL R D+ + D RG + TR K + + A++LAYAG+ RL
Sbjct: 120 ANAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDAGEFDAMMLAYAGVYRLNFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G
Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIRF 298
C+ I + + TL V + DGK+ E+++ G + A G A+ +
Sbjct: 240 GCQIPIGAYGSFQNGTLKLLAYVGSVDGKVGLHDEITKTGLTSPEQAEEAGIALAEKLLA 299
Query: 299 ISNKNVF 305
+
Sbjct: 300 QGADAIL 306
>gi|89069761|ref|ZP_01157097.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516]
gi|89044707|gb|EAR50818.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516]
Length = 313
Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats.
Identities = 132/304 (43%), Positives = 176/304 (57%), Gaps = 1/304 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A ETR L H +P ++ + T GDR+ +R L EIGGKGL
Sbjct: 9 RPLKIGTRGSPLALAQAHETRDRLAAAHGLPGEAFEVVVIRTTGDRVVDRPLKEIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EIE+ ++SG ID AVHS KDMP +GL + YLPRED RD F+S +K L
Sbjct: 69 FTKEIEEAMLSGAIDIAVHSMKDMPVAQPEGLVLDCYLPREDPRDAFVSLLHAGIKALPD 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRKA LL R D+ V++FRG ++TRL KL + A A LA AG+ RL +
Sbjct: 129 GATVGTSSLRRKAQLLHRRPDLHVVEFRGNVQTRLRKLESGVAVATFLAVAGLNRLGADD 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + + ED P+ QGAI IE ++ E++ I+ T + + ERAFLA LDGS
Sbjct: 189 VPQAPIAPEDMLPAVAQGAIGIERRASDEGLGEMLAAIHDRATGERLAAERAFLAALDGS 248
Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C++ IAG A G L G +LA DG D +G D A+ + +
Sbjct: 249 CETPIAGLAELIGDGRLRLRGEILAHDGSRCLADEAEAQIADGAALGTDMARRLLAQAGP 308
Query: 303 NVFN 306
F+
Sbjct: 309 GFFD 312
>gi|84685204|ref|ZP_01013103.1| porphobilinogen deaminase [Maritimibacter alkaliphilus HTCC2654]
gi|84666936|gb|EAQ13407.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2654]
Length = 319
Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats.
Identities = 136/310 (43%), Positives = 183/310 (59%), Gaps = 5/310 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEI 58
KP +IGTR SPLALA A+ETR L +P I+ + T GD +R L EI
Sbjct: 9 TKPLKIGTRGSPLALAQAYETRDRLAAAFDLPETAFEIVVIKTTGDDRAMIAADRPLKEI 68
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G KGLFT EIE +L++G ID AVHS KDMPT+ GL + YLPRED RD FIS +
Sbjct: 69 GNKGLFTREIEDQLLNGGIDLAVHSMKDMPTEQPPGLTLDCYLPREDTRDAFISLGGGGI 128
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
LA +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A A LA AGI R
Sbjct: 129 HGLAEGAVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLTKLRDGVAEATFLAMAGITR 188
Query: 179 LKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
L ++V + + ED P+ QGAI IE ++ ++++ I+H T + ER+FL
Sbjct: 189 LGMLDEVPHDAIAPEDMLPAIAQGAIGIERRSHDTNVADMLEAIHHGGTERRLAAERSFL 248
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A LDGSC++ IAG A G TL G +L +DG +G D ++GR AQ +
Sbjct: 249 ATLDGSCETPIAGLAEIDGGTLRLRGEILRTDGSEALADEISGAVEDGPDMGRALAQKLL 308
Query: 298 FISNKNVFNF 307
+ + F++
Sbjct: 309 SRAGPDFFDW 318
>gi|226509736|ref|NP_001150986.1| LOC100284619 [Zea mays]
gi|195643410|gb|ACG41173.1| porphobilinogen deaminase [Zea mays]
Length = 356
Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats.
Identities = 130/306 (42%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKATHSELAEERAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SVIG++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL +
Sbjct: 168 GSVIGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300
C++ IA +AY F G++ + G E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDNDGNCSFRGLLASPGGSKVFETTRSGPYSFDDMVEMGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|194367302|ref|YP_002029912.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3]
gi|238059002|sp|B4SJT8|HEM3_STRM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194350106|gb|ACF53229.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3]
Length = 303
Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 160/303 (52%), Gaps = 2/303 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + + A L R D D F+S+ SL L +
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFALPAMLTRHDPADGFVSNLYASLDALPIG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRALRPDLQLLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGER 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L + P+P QGA+ +E +N + L ++ T V ERA L GSC
Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGSNARLMALFAGLDDAATRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A A +G L+ G+V ++ G D +G+ A+ + +
Sbjct: 241 HVPVAAIAQWQGQDLHLQGLVGSASDGRAVRAEAVGPASDPEVLGQRVAKMLLDAGAGEL 300
Query: 305 FNF 307
N
Sbjct: 301 LNV 303
>gi|242242934|ref|ZP_04797379.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144]
gi|242233535|gb|EES35847.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144]
Length = 308
Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 173/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+
Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DG
Sbjct: 180 NIVTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMDG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++
Sbjct: 240 SCQVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLKKQGA 297
Query: 302 KNVF 305
++
Sbjct: 298 YDII 301
>gi|310815397|ref|YP_003963361.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25]
gi|308754132|gb|ADO42061.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25]
Length = 314
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 132/302 (43%), Positives = 176/302 (58%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIGTR SPLALA A+ETR L +P I + GD + ++ L EIGGKGL
Sbjct: 10 QPLRIGTRGSPLALAQAYETRDRLAQAFALPHEAFQIEVIKVTGDMVQDKALREIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S +L D+
Sbjct: 70 FTREIEDALLDGSIDIAVHSMKDMPVEQPAGLLLDCYLPREDVRDAFVSLHGWTLADVPA 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
VIGTSSLRR+A +L R D++V++FRG ++TRL KL+ A A LA AG+ RL++
Sbjct: 130 GKVIGTSSLRRRAQILARRPDLTVVEFRGNVQTRLKKLDEGVADATFLAMAGLNRLQRGD 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + L +E P+ QGAI IE ++ + ++ VI+ T + ERAFLA LDGS
Sbjct: 190 VPLKALEVEQMLPAVAQGAIGIERRADDRIIEGMLAVIHDGPTGVRLAAERAFLAGLDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + IAG A G + G VL DG G DA IG + A+ +R ++ +
Sbjct: 250 CHTPIAGLAEIIGDQIRLRGEVLRPDGSEAICDDMRGAAVDAAQIGAEMARKLRGLAGEG 309
Query: 304 VF 305
F
Sbjct: 310 FF 311
>gi|254508818|ref|ZP_05120929.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16]
gi|219548275|gb|EED25289.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16]
Length = 271
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ TKGD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL +
Sbjct: 1 MVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+T ++ +L +V+GT SLRR+ + +R D+ + + RG + TRL KL+
Sbjct: 61 REDPRDAFVSNTYNNIDELPHGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +N
Sbjct: 121 AGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H+DT D V CERA L+G C+ I +A G ++ +V DG G R
Sbjct: 181 HQDTADRVLCERAMNLTLEGGCQVPIGSYALLDGDEIWLRALVGEPDGSEIVRGEIKGAR 240
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
DA N+G A + + +
Sbjct: 241 ADAENLGVTLANQLLDKGAREIL 263
>gi|189423573|ref|YP_001950750.1| porphobilinogen deaminase [Geobacter lovleyi SZ]
gi|238058916|sp|B3E2H7|HEM3_GEOLS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189419832|gb|ACD94230.1| porphobilinogen deaminase [Geobacter lovleyi SZ]
Length = 312
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A T+S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MAPKRLRIGTRASQLALWQANWTKSELEA--RYPGIQVELVKIKTMGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS + +
Sbjct: 59 KGLFVKEIEEAMLRGEIDLAVHSMKDVPTEFPEGLGLVVTTKREDPRDAFIS-DKVTFSE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL
Sbjct: 118 LRQGARIGTSALRRQAQLLKARPDLEMVIIRGNVETRIRKLKEDNLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ E+L+ + P+ GQGA+ +E +++ E + +NH DT +V ERA L
Sbjct: 178 FTDVVTELLDTDFSIPAIGQGALGLECRLDDNATIEALAFLNHADTAAAVAAERALLKRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA G TL G + + DGK +G+ DA+ +G + A +
Sbjct: 238 EGGCQVPIAAHGTVSGDTLTLVGFIASVDGKQTVRDRISGSTADAVKLGTELADRLLAAG 297
Query: 301 NKNVFN 306
K +
Sbjct: 298 GKAILE 303
>gi|82751259|ref|YP_417000.1| porphobilinogen deaminase [Staphylococcus aureus RF122]
gi|123727415|sp|Q2YTB9|HEM3_STAAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|82656790|emb|CAI81219.1| Porphobilinogen deaminase [Staphylococcus aureus RF122]
Length = 308
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 168/304 (55%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+I+ P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDIDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|195953610|ref|YP_002121900.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1]
gi|195933222|gb|ACG57922.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1]
Length = 285
Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats.
Identities = 115/293 (39%), Positives = 172/293 (58%), Gaps = 9/293 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LAL A +S L + I ++ ++T GD+I + L++IGGKGLF
Sbjct: 2 KLRLGTRKSKLALWQANFVKSKLEAL----GLEIELVLITTTGDKILDTPLSKIGGKGLF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ EID AVHS KD+P + +GL + +L RED +D F+S + ++L +L +
Sbjct: 58 VKEIENALMEDEIDFAVHSLKDVPAFIPQGLVVDVFLEREDPKDAFVSKSYKTLNELPPN 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS+RRK LL+ R D+++ D RG ++TRL KL + AI+LA AG+KRL E V
Sbjct: 118 AKIGTSSIRRKVQLLQRRKDLTIEDLRGNVDTRLKKLEDGLYDAIILASAGLKRLGFEGV 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L DF P+ GQG + IE +N + ++K INHE T+ ER+FL ++GSC
Sbjct: 178 ISSYL---DFIPAVGQGIVAIEYKASNKELSNILKQINHEPTYICALAERSFLETVEGSC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ + A + G + DG + E++ G D I +G+D A+ +
Sbjct: 235 QIPMGAHATLAQDLIKIRGFIANEDGTNYRELTLEGK--DPIGLGKDLAKNLL 285
>gi|253995539|ref|YP_003047603.1| porphobilinogen deaminase [Methylotenera mobilis JLW8]
gi|253982218|gb|ACT47076.1| porphobilinogen deaminase [Methylotenera mobilis JLW8]
Length = 313
Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 162/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGL
Sbjct: 11 KKLVIASRESALAMWQARHIQSRLQALY--PETEVTILGMTTTGDQILDTPLAKVGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L G D AVHS KD+P L +G ++A RED RD F+S+ +L+DL
Sbjct: 69 FVKELEIALADGRADLAVHSMKDVPMNLPEGFILAATGEREDPRDAFVSNDYATLEDLPA 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL+
Sbjct: 129 NSIVGTSSLRRQSQLQARFPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLELGN 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I++ + E P+ GQGA+ IE + P + +NH DT V ER L GS
Sbjct: 189 RIRQFIAPEHSIPAVGQGALGIEISADRPDLIATLAPLNHPDTQVCVEAERGMSRSLAGS 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + +A C+ ++ G V + DGK + G+R +A +G+ A +
Sbjct: 249 CTVPLGAYAVCEADSIRITGFVASVDGKQMLIETAVGSRANAEALGKTLASQLVAKGADK 308
Query: 304 VF 305
+
Sbjct: 309 IL 310
>gi|83952840|ref|ZP_00961570.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM]
gi|83835975|gb|EAP75274.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM]
Length = 304
Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats.
Identities = 131/302 (43%), Positives = 183/302 (60%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLALA A+ETR L+ +P I+ ++T GDR+ +R L EIGGKGLFT
Sbjct: 1 MKIGTRGSPLALAQAYETRDRLVAAFDLPETAFEIVIITTTGDRVIDRPLKEIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE L++G+ID AVHS KDMP +GL I YLPRED+RD FI T ++L ++A +
Sbjct: 61 REIEDALLTGDIDLAVHSMKDMPVLQPEGLIIDCYLPREDVRDAFICPTGRNLSEMAPGT 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+A +L + V++FRG ++TRL KL+ A LA AG+ RLK+ +VI
Sbjct: 121 KVGSSSLRRRAQVLVAHPQLEVVEFRGNVQTRLRKLDEGVAACTFLAMAGLNRLKRTEVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L E+ P+ QGAI IE ++ A +++ I+H T + ERAFLA LDGSC+
Sbjct: 181 TRALEPEEMLPAVAQGAIGIERRRDDSGAAMMLEAIHHGPTGQRLAAERAFLAALDGSCE 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G TL G +L DG R+ D +GR A + + + F
Sbjct: 241 TPIAGLAELQGGTLRLRGEILRPDGSERLCDDRSAPVEDGAELGRAMAVDLLAQAGPDFF 300
Query: 306 NF 307
++
Sbjct: 301 DW 302
>gi|74181545|dbj|BAE30038.1| unnamed protein product [Mus musculus]
Length = 360
Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats.
Identities = 108/336 (32%), Positives = 157/336 (46%), Gaps = 34/336 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK----------IFHEVSRNGNRCD----- 284
L+G C +A K LY G V + DG I V +G D
Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQEDGPEDDPQLVG 316
Query: 285 -------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 ITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 352
>gi|282916930|ref|ZP_06324688.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
D139]
gi|283770735|ref|ZP_06343627.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19]
gi|282319417|gb|EFB49769.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
D139]
gi|283460882|gb|EFC07972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19]
Length = 308
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|258424087|ref|ZP_05686969.1| porphobilinogen deaminase [Staphylococcus aureus A9635]
gi|257845708|gb|EEV69740.1| porphobilinogen deaminase [Staphylococcus aureus A9635]
Length = 308
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L +L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSELPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|84516581|ref|ZP_01003940.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53]
gi|84509617|gb|EAQ06075.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53]
Length = 314
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 134/302 (44%), Positives = 179/302 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PF IGTR SPLALA A ETR+ LM +P I+ + GD I +R L +IGGKGLF
Sbjct: 11 PFNIGTRGSPLALAQAHETRARLMAAFDLPQDAFAIVVIKVMGDAIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S TA+ L DL
Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPVEQPSGLLLDTYLPREDVRDAFVSLTARGLDDLEHG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR++ LL R D++V++FRG ++TRL KL N A A LA AG+ RL V
Sbjct: 131 ATVGTSSLRRRSQLLVRRPDLNVVEFRGNVQTRLMKLGNGVAEATFLAMAGLNRLNMTDV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QGAI IE ++ +A +++ I+H T + ER+FLA LDGSC
Sbjct: 191 PRTAIAPEDMLPAIAQGAIGIERRADDSRAAAMLEAIHHGPTGQRLAAERSFLAHLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ I G A G TL G +L +DG G D ++GR+ A + +
Sbjct: 251 QTPIGGLADLDGGTLRLRGEILRTDGSQVLADDMIGAIADGADMGREMAVKLLEKAGPGF 310
Query: 305 FN 306
F+
Sbjct: 311 FD 312
>gi|319400986|gb|EFV89205.1| porphobilinogen deaminase [Staphylococcus epidermidis FRI909]
Length = 308
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 173/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+
Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DG
Sbjct: 180 NIVTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLTKVHNHDVAQCVTAERTFLSEMDG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++
Sbjct: 240 SCQVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLKKQGA 297
Query: 302 KNVF 305
++
Sbjct: 298 YDII 301
>gi|296216375|ref|XP_002754553.1| PREDICTED: porphobilinogen deaminase [Callithrix jacchus]
Length = 361
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL
Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDI 353
>gi|114705601|ref|ZP_01438504.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506]
gi|114538447|gb|EAU41568.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506]
Length = 316
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 137/303 (45%), Positives = 194/303 (64%), Gaps = 1/303 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A E R+ L+ H + + I +ST GDRI +R L+E+GGKGLF
Sbjct: 7 IIRIGTRGSPLALAQASEVRARLIAAHGLTEDDFAIEVISTSGDRILDRPLSEVGGKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE L+ ID AVHS+KDM T + GL I+A+L RED+RD FI A++L DL
Sbjct: 67 TKEIEAALLDRRIDLAVHSSKDMATAIPDGLAITAFLEREDVRDAFIGRDAKTLADLPEG 126
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G++SLRR+AL+ R R D++ I FRG ++TRL KL +A A LLA AG+ R++ +
Sbjct: 127 ATVGSASLRRQALIKRLRPDLNTIIFRGNVQTRLRKLGEGQADATLLALAGLNRMEMQHH 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+IL EDFPP+PGQGAICIE+ + + + LV I H++T +++ ERAFL LDGSC
Sbjct: 187 ATDILEPEDFPPAPGQGAICIESRQGDTRIENLVSAIVHDETSIALHAERAFLKVLDGSC 246
Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
++ IA A + F+G++L DG HEV G+ A+ +G A + + + +
Sbjct: 247 RTPIAARAVLWDSGRIAFHGMILRPDGTEVHEVHDEGDADGAVALGERAGRSVLEAAGPH 306
Query: 304 VFN 306
F+
Sbjct: 307 FFD 309
>gi|294676723|ref|YP_003577338.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003]
gi|12280937|gb|AAG50298.1| porphobilinogen deaminase [Rhodobacter capsulatus]
gi|294475543|gb|ADE84931.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003]
Length = 317
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 126/307 (41%), Positives = 179/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA AFETRS LM +P I+ + T GD ++ L E+GG
Sbjct: 10 PLKIGTRGSPLALAQAFETRSRLMAAFDLPEEAFEIVVIKTSGDNAALIAADKPLKEVGG 69
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++G ID AVHS KDMPT +GL + YLPRED RD F+S SL +
Sbjct: 70 KGLFTKEIEEAMLAGSIDIAVHSMKDMPTLQPEGLILDCYLPREDTRDAFVSMKYNSLAE 129
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A L R D+ +++FRG ++TR+ KL A A LA AG+ RL
Sbjct: 130 LPEGAVVGTSSLRRRAQLAARRPDLKMVEFRGNVQTRMKKLGEGVADATFLALAGLNRLG 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+V K + ED P+ QG I IE + +A+ L+ I+H + + CER+FL L
Sbjct: 190 MSEVAKSAIEPEDMLPAVAQGCIGIERREADTRAKMLLDAIHHAPSGLRLACERSFLLTL 249
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G + +G ++ G +L DG G D + +G + A+ + +
Sbjct: 250 DGSCETPIGGLSVLEGDQIWLRGEILRPDGSETITGEIRGPAADGVALGAELAKQLLAKA 309
Query: 301 NKNVFNF 307
+ F +
Sbjct: 310 PADFFCW 316
>gi|260425851|ref|ZP_05779830.1| porphobilinogen deaminase [Citreicella sp. SE45]
gi|260420343|gb|EEX13594.1| porphobilinogen deaminase [Citreicella sp. SE45]
Length = 319
Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats.
Identities = 136/308 (44%), Positives = 185/308 (60%), Gaps = 4/308 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT----NRTLTEIG 59
+P RIGTR SPLALA A ETR L D + P I+ + T GD + +R L EIG
Sbjct: 10 QPLRIGTRGSPLALAQAHETRDRLCDTFALSPEAFEIVVIRTTGDDRSMIAADRPLKEIG 69
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KGLFT+EIE++L++G ID AVHS KDMPT +GL + YLPRED+RD FIS L
Sbjct: 70 NKGLFTKEIEEQLMTGGIDIAVHSMKDMPTLQPEGLMLDCYLPREDVRDAFISPGHGGLG 129
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG+ R+
Sbjct: 130 DLPAGTVVGTSSLRRRAQLLNRRPDLRVVEFRGNLQTRLKKLEDGVAAATFLAMAGLNRM 189
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ ++ ++ P+ QGAI IE ++ +A E++ I+ DT + ERAFLAE
Sbjct: 190 GMTQLPMTAMSPDEMLPAVAQGAIGIERRSDDSRAAEMLAAIHDRDTALRLGAERAFLAE 249
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IAG A G+ L G +LA DG H G + +GR AQ +
Sbjct: 250 LDGSCETPIAGLAELDGTALRLRGELLAPDGSASHAGEIAGPADNGPELGRLLAQQLLAR 309
Query: 300 SNKNVFNF 307
+ + F +
Sbjct: 310 AGADFFAW 317
>gi|86139102|ref|ZP_01057673.1| porphobilinogen deaminase [Roseobacter sp. MED193]
gi|85824333|gb|EAQ44537.1| porphobilinogen deaminase [Roseobacter sp. MED193]
Length = 319
Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats.
Identities = 129/307 (42%), Positives = 176/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L + +P I+ + T GD ++ L E+GG
Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLAEAFDLPHEAFEIVVIKTSGDNQALIAADKPLKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D
Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KLN A LA AG+ RL
Sbjct: 131 LEPGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLNEGVAECTFLAMAGLNRLA 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ + +++ I+ T + ERAFLA L
Sbjct: 191 MADVPATAIETNDMLPAVAQGAIGIERRGDDSRTAAMLEAIHDVTTGKRLAAERAFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G TL G VL DG ++ D +GR+ A + +
Sbjct: 251 DGSCETPIAGLAELDGGTLRLRGEVLRPDGSEALAEDQSCAIEDGGELGREMAAKLLATA 310
Query: 301 NKNVFNF 307
F++
Sbjct: 311 GPGFFDW 317
>gi|262163679|ref|ZP_06031420.1| porphobilinogen deaminase [Vibrio mimicus VM223]
gi|262027895|gb|EEY46559.1| porphobilinogen deaminase [Vibrio mimicus VM223]
Length = 271
Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats.
Identities = 97/264 (36%), Positives = 146/264 (55%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+T + DL +V+GT SLRR+ L R D+ + + RG + TRL+KL+
Sbjct: 61 REDPRDAFVSNTYAKIDDLPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL+ E I+ + E P+ GQGA+ IE +++ + +EL+ +N
Sbjct: 121 AGEYDAIILAAAGLKRLELESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H DT D V CERA L G C+ I +A G ++ +V DG G R
Sbjct: 181 HTDTADRVRCERAMNLTLQGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPR 240
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+A +G A+ + K +
Sbjct: 241 SEAEQLGITLAEQLLGQGAKEILE 264
>gi|57650542|ref|YP_186555.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL]
gi|87160322|ref|YP_494312.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195475|ref|YP_500279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221776|ref|YP_001332598.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509889|ref|YP_001575548.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142579|ref|ZP_03567072.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253732321|ref|ZP_04866486.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253734545|ref|ZP_04868710.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|258451815|ref|ZP_05699837.1| porphobilinogen deaminase [Staphylococcus aureus A5948]
gi|262048646|ref|ZP_06021529.1| porphobilinogen deaminase [Staphylococcus aureus D30]
gi|262052244|ref|ZP_06024449.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3]
gi|282920211|ref|ZP_06327936.1| porphobilinogen deaminase [Staphylococcus aureus A9765]
gi|284024719|ref|ZP_06379117.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 132]
gi|294848692|ref|ZP_06789438.1| porphobilinogen deaminase [Staphylococcus aureus A9754]
gi|304380738|ref|ZP_07363407.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|11386773|sp|O34090|HEM3_STAA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71152114|sp|Q5HFA2|HEM3_STAAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123749605|sp|Q2FG66|HEM3_STAA3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|172048933|sp|A6QHK4|HEM3_STAAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028161|sp|A8Z2J1|HEM3_STAAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|2589181|gb|AAC45833.1| porphobilinogen deaminase [Staphylococcus aureus]
gi|57284728|gb|AAW36822.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL]
gi|87126296|gb|ABD20810.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203033|gb|ABD30843.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150374576|dbj|BAF67836.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160368698|gb|ABX29669.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253723959|gb|EES92688.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253727486|gb|EES96215.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257860527|gb|EEV83353.1| porphobilinogen deaminase [Staphylococcus aureus A5948]
gi|259159845|gb|EEW44884.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3]
gi|259163293|gb|EEW47852.1| porphobilinogen deaminase [Staphylococcus aureus D30]
gi|269941151|emb|CBI49538.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
TW20]
gi|282594559|gb|EFB99544.1| porphobilinogen deaminase [Staphylococcus aureus A9765]
gi|294824718|gb|EFG41141.1| porphobilinogen deaminase [Staphylococcus aureus A9754]
gi|302751497|gb|ADL65674.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340737|gb|EFM06668.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|315198635|gb|EFU28963.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140451|gb|EFW32305.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143989|gb|EFW35758.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314344|gb|AEB88757.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
T0131]
gi|329728357|gb|EGG64794.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21189]
gi|329733184|gb|EGG69521.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21193]
Length = 308
Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQNEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|319942681|ref|ZP_08016988.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B]
gi|319803764|gb|EFW00699.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B]
Length = 309
Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats.
Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 2/298 (0%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR SPLA+ A ++ L D + P + ++ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 9 IATRESPLAMWQALHVQALLRD--RYPGAEVELLGMTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E ++ G D AVHS KD+P +L +G ++ A RED RD F+S SL D+ + +
Sbjct: 67 LEAAMLEGRADLAVHSLKDVPMELPEGFELVAVSEREDPRDAFVSPKYASLDDMPAGARV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+ +L + V+ RG + TRL KL+ + A+++A AG+KRL I++
Sbjct: 127 GTASLRRELMLRMRYPHLEVLPVRGNVGTRLRKLDEGQFDALVMASAGLKRLGLGDRIRQ 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
I+ E P+PGQGA+ IE + K + + IN +T ERA L GSC+
Sbjct: 187 IIPAEVSLPAPGQGALGIEIRKGDEKMEAALGFINSPETRACCMAERAVSRALGGSCQVP 246
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A + L+ +V G + + + +R ++
Sbjct: 247 LAAYAVVENGELWLRALVGNHKEGKAAFTQARGPLAEPEALAARVVEDLRRQGAEDYL 304
>gi|302342250|ref|YP_003806779.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075]
gi|301638863|gb|ADK84185.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075]
Length = 310
Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats.
Identities = 117/301 (38%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LALA A L + P + + TKGD+I + L ++GGKGLF
Sbjct: 3 KLIIATRGSELALAQARWAARQLSAL--SPGLEVELQLFKTKGDKILDAPLAKVGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ G AVHS KDMP +L GL I+A RED RDV IS L +L
Sbjct: 61 VKEIEDALLDGRARVAVHSMKDMPAELPPGLCIAAVSRREDPRDVLISRDGLGLDELPAT 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSSLRR+A LL R D V+ RG ++TRL KL AI+LA AG+ RL
Sbjct: 121 PRLGTSSLRRQAQLLARRPDAMVVSVRGNVQTRLRKLEELGLDAIVLAAAGLDRLGLSDP 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L E P+ GQGA+ IE ++ EL + H+ T +V ERAFL L+G C
Sbjct: 181 RRVDLAPELMLPAVGQGALAIEARADDAFCLELCARLAHQPTAVAVEAERAFLGRLEGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG A G + F G+V + DGK G +A +G A+ I + +
Sbjct: 241 QVPIAGHAVVDGDEIVFEGLVASLDGKRLIRRRAVGRADEAGPLGLAVAEEILADGGRQI 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|289550573|ref|YP_003471477.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01]
gi|289180105|gb|ADC87350.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01]
Length = 310
Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 172/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L
Sbjct: 60 FVKEIQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPD 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ +
Sbjct: 120 GSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+K ++++ D V ER FLA +DG
Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDVELLALLKQVHNQQVADCVTAERTFLAAMDG 239
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A K + F G+++ DGK +E + +GN + I +G + +
Sbjct: 240 SCQVPIGGYAMNKPNGDIEFTGLIMTPDGKERYEHTESGN--NPIELGNKVSDVLIEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|311031438|ref|ZP_07709528.1| porphobilinogen deaminase [Bacillus sp. m3-13]
Length = 310
Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + P + + + TKGD+I + TL+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNWVIDQLKALGA--PFDFEVKEIVTKGDQILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ +ID AVHS KDMP L +GL I RED RD FIS DL
Sbjct: 60 FVKEIEQAMLDKDIDMAVHSMKDMPAVLPEGLTIGCIPFREDHRDAFISKDHVKFADLPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S++GTSSLRR A LL R D+ + RG I+TRL KL N AI+LA AG+ R+ +
Sbjct: 120 GSIVGTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLQNEDYDAIILAAAGLARMGWSK 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L+ + P+ GQGA+ IE ++ E++K+ T +V ERAFL +++G
Sbjct: 180 DVVTEFLDEDLCLPAVGQGALSIECREDDADLLEVLKLFTDSVTEKAVIAERAFLHKMEG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAGFA + L +V A DG + ++ G D + +G +AA+ +
Sbjct: 240 GCQVPIAGFASVGQDDNLTLTVLVGAPDGSVLYKERITGT--DPVKVGLEAAESLTAQGG 297
Query: 302 KNVFN 306
K + +
Sbjct: 298 KKIID 302
>gi|208435725|pdb|3ECR|A Chain A, Structure Of Human Porphobilinogen Deaminase
gi|208435726|pdb|3ECR|B Chain B, Structure Of Human Porphobilinogen Deaminase
Length = 364
Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats.
Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 22 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 79
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 80 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 139
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 140 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 199
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 200 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 259
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 260 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 319
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 320 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 356
>gi|114770079|ref|ZP_01447617.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255]
gi|114548916|gb|EAU51799.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255]
Length = 307
Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats.
Identities = 119/301 (39%), Positives = 172/301 (57%), Gaps = 1/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR SPLALA A ET L+ + I + T GD+I +R L+E+GGKGLF
Sbjct: 8 PLVIGTRGSPLALAQAHETMGRLIRSTGLDESCFKITVIKTSGDKIQDRPLSEVGGKGLF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE ++ ID AVHS KDMP +GL++S YLPRED+RD FIS +++ +L
Sbjct: 68 TKEIEDAMLDYGIDIAVHSMKDMPVICPEGLKLSCYLPREDVRDSFISTKYKNINELPKG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A LL R D+ +++FRG ++TRL KLN A A LA AG+ RL + ++
Sbjct: 128 ATVGTSSLRRRAQLLNKRPDLKIVEFRGNVQTRLRKLNEGVAEATFLACAGLNRLGRNEI 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ +D P+ QG I IE + + E++ IN + + ER LAELDGSC
Sbjct: 188 -SNPIEPDDMLPAIAQGCIGIEQREGDTEIAEILTKINDKSASLRLAAERTLLAELDGSC 246
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G + G V+ DG + + + + + A+ +R ++
Sbjct: 247 QTPIAGLAELDGQKMRLRGEVIRPDGSEVLKDEIICHVNEGVEMASGMAKRLRDQMGEDF 306
Query: 305 F 305
F
Sbjct: 307 F 307
>gi|148655885|ref|YP_001276090.1| porphobilinogen deaminase [Roseiflexus sp. RS-1]
gi|166217784|sp|A5UU37|HEM3_ROSS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148567995|gb|ABQ90140.1| hydroxymethylbilane synthase [Roseiflexus sp. RS-1]
Length = 303
Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 163/303 (53%), Gaps = 3/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IGTR S LAL + R +L H P + + ++T+GD I +R L IG KG
Sbjct: 2 KQTLIIGTRASKLALVQTYMVRDALQSAH--PGLTVAVEHITTRGDIILDRPLNAIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF EIE+ + +G ID AVHSAKD+P+ L + ++A R D RD ++ +L L
Sbjct: 60 LFVVEIEEAMRAGRIDLAVHSAKDLPSVLPPDMTLAACPRRADPRDALVAQPGMTLAALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL +
Sbjct: 120 SGARVGTSSLRRACQLRALRPDLTLVDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E++ + P+ GQG I +E ++ + L+ ++ + ++ ERAFLA + G
Sbjct: 180 GAISELIEPDVLIPAVGQGVIGVEARADDEEVLRLLAPLDDQAARIAITAERAFLARIGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + A+ +G L G++ A DG+ + G+ D + +G A + +
Sbjct: 240 GCQVPVGALAHLEGDELLLRGMIGARDGR-MVRGMQRGSASDPVGLGCALADELLDQGGR 298
Query: 303 NVF 305
+
Sbjct: 299 ALL 301
>gi|148358525|ref|YP_001249732.1| porphobilinogen deaminase [Legionella pneumophila str. Corby]
gi|148280298|gb|ABQ54386.1| porphobilinogen deaminase [Legionella pneumophila str. Corby]
Length = 321
Score = 350 bits (900), Expect = 9e-95, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 160/306 (52%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 13 MSAKIIRIATRQSPLALWQANHVRKML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLAAICKRDNPFDALISPQFKSLDA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 250
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + + L VL DG + + G +A I + +
Sbjct: 251 GGNCHIPFAVYCTITEEKRLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 310
Query: 300 SNKNVF 305
++
Sbjct: 311 GAMSLL 316
>gi|160872858|ref|ZP_02062990.1| porphobilinogen deaminase [Rickettsiella grylli]
gi|159121657|gb|EDP46995.1| porphobilinogen deaminase [Rickettsiella grylli]
Length = 311
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 125/308 (40%), Positives = 172/308 (55%), Gaps = 5/308 (1%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M KK RI TR SPLA A ++ L + P I ++P T+GDR ++ +L + G
Sbjct: 1 MSKKKFLRIATRKSPLAYWQATSIKNQLEKI--FPFLKITLLPFVTEGDRPSH-SLNQWG 57
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G+ D AVHS KD+P L KGL + A R D RDV IS + +
Sbjct: 58 GKGLFVKELEAALLHGQADIAVHSLKDLPMTLEKGLVLGAICKRCDPRDVLISRSDRLFT 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L S +GTSSLRR++ LL R D+ + RG I TRLNKL + AI+LA AG+ RL
Sbjct: 118 QLPPGSYVGTSSLRRQSQLLALRPDLKIGVLRGNIGTRLNKLAAGEFDAIILAAAGLIRL 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
KK + I E I+ F P+PGQGA+ IE H N+ ++ + + H T V ERA E
Sbjct: 178 KKTECISEYFEIDHFLPAPGQGALGIECHENDEESLTYISALIHPITHSCVLAERALSRE 237
Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C+ +A +A G + V +SDG +V + G R +A IG AAQ +R
Sbjct: 238 LGGGCQVPLAAYAASLGQDFIRLQAFVGSSDGTTQIKVEKQGPRVEAEKIGFLAAQDLRA 297
Query: 299 ISNKNVFN 306
+ + + N
Sbjct: 298 LGVEEILN 305
>gi|254474607|ref|ZP_05087993.1| porphobilinogen deaminase [Ruegeria sp. R11]
gi|214028850|gb|EEB69685.1| porphobilinogen deaminase [Ruegeria sp. R11]
Length = 320
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 132/307 (42%), Positives = 180/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAYETRARLAAAFDLPDDAFEIVVIKTTGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP + GL + YLPRED+RD FIS + S+ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVQQPDGLVLDTYLPREDVRDAFISPSLTSIHD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A LL R D++V+ FRG ++TRL KL+ A LA AG+ RL
Sbjct: 132 LAKGAVVGTSSLRRRAQLLHRRPDLNVVQFRGNVQTRLRKLSEGVAECTFLAMAGLNRLA 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ +A +++ I+ + T + ERAFLA L
Sbjct: 192 MADVPANAIETNDMLPAVAQGAIGIERRTSDNRAADMLAAIHDQQTGQRLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+TL G VL DG + D +GR A + +
Sbjct: 252 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAISDDQRCPIEDGAELGRAMAAKLLDQA 311
Query: 301 NKNVFNF 307
+ F++
Sbjct: 312 GEGFFDW 318
>gi|34101365|gb|AAQ57734.1| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472]
Length = 295
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 106/286 (37%), Positives = 159/286 (55%), Gaps = 2/286 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF +E+E+ L+ G
Sbjct: 1 MWQAEHIQARLQALY--PHLTVEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALMDGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L G ++A RED RD F+S+ Q L +L SV+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L ++V RG ++TRL KL++ + AI+LA AG+KRL + I+ L + P
Sbjct: 119 QLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELAPSESLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + L+ +NH DT ERA EL GSC+ + FA
Sbjct: 179 AAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSCQVPLGAFATLAD 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
TL G+V DG + S +G A +GR A+ + +
Sbjct: 239 GTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGAR 284
>gi|159110431|ref|NP_038579.2| porphobilinogen deaminase isoform 1 [Mus musculus]
gi|74177773|dbj|BAE38979.1| unnamed protein product [Mus musculus]
gi|74198532|dbj|BAE39746.1| unnamed protein product [Mus musculus]
Length = 361
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353
>gi|159110463|ref|NP_001103721.1| porphobilinogen deaminase isoform 2 [Mus musculus]
gi|74138074|dbj|BAE25434.1| unnamed protein product [Mus musculus]
Length = 344
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 336
>gi|298369901|ref|ZP_06981217.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281361|gb|EFI22850.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 311
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGTIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIASHRTDLLDVLKPLNHDITRACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQADAQAPAAYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIE 304
>gi|13277999|gb|AAH03861.1| Hydroxymethylbilane synthase [Mus musculus]
Length = 361
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353
>gi|83590097|ref|YP_430106.1| porphobilinogen deaminase [Moorella thermoacetica ATCC 39073]
gi|123766782|sp|Q2RJ26|HEM3_MOOTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83573011|gb|ABC19563.1| hydroxymethylbilane synthase [Moorella thermoacetica ATCC 39073]
Length = 313
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 116/301 (38%), Positives = 164/301 (54%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LA A +L P + ++ L TKGD+I + L IG KGLFT
Sbjct: 4 IKVGSRESELARWQARWVIQALEKA--WPGLSCRLVTLKTKGDKILDVALARIGDKGLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G ID AVHS KDMPT L +GL I A PRED DV +S +L L + +
Sbjct: 62 KELELALLDGAIDLAVHSMKDMPTTLPEGLVIGAIGPREDPADVLVSPEGYTLATLPIKA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRKA L R D+ ++D RG + TRL K+ + AI+LA AG+KRL +V+
Sbjct: 122 RVGTSSLRRKAQLAYARPDLELVDLRGNVPTRLAKMERDGLTAIVLAAAGLKRLNHGQVL 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E + P+ GQGAI +E + + ELV INH T +V ERA+L L+G C+
Sbjct: 182 GEPIPYHICLPAVGQGAIGVEIRAGDRRVAELVAAINHPPTAAAVRAERAYLRALEGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA A + + L G+V + DG+ +G+ D GR+ A+ + +
Sbjct: 242 VPIAALATVEDTALVLQGMVASLDGREMLRDIASGSTRDPEAAGRELARKLLARGAGEIL 301
Query: 306 N 306
Sbjct: 302 Q 302
>gi|387507|gb|AAA39891.1| porphobilinogen deaminase (erythroid sp.) [Mus musculus]
Length = 344
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+
Sbjct: 60 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 336
>gi|49483913|ref|YP_041137.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425786|ref|ZP_05602210.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428452|ref|ZP_05604850.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431086|ref|ZP_05607463.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433769|ref|ZP_05610127.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436685|ref|ZP_05612729.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M876]
gi|282904242|ref|ZP_06312130.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
C160]
gi|282906067|ref|ZP_06313922.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908982|ref|ZP_06316800.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911298|ref|ZP_06319100.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914467|ref|ZP_06322253.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282919436|ref|ZP_06327171.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C427]
gi|282924813|ref|ZP_06332479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C101]
gi|283958422|ref|ZP_06375873.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503545|ref|ZP_06667392.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510560|ref|ZP_06669265.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M809]
gi|293537102|ref|ZP_06671782.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|295428242|ref|ZP_06820871.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590795|ref|ZP_06949433.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
MN8]
gi|55976402|sp|Q6GG35|HEM3_STAAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49242042|emb|CAG40741.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271480|gb|EEV03626.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275293|gb|EEV06780.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278034|gb|EEV08682.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281862|gb|EEV11999.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284036|gb|EEV14159.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M876]
gi|282313179|gb|EFB43575.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C101]
gi|282317246|gb|EFB47620.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C427]
gi|282321648|gb|EFB51973.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282324993|gb|EFB55303.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327246|gb|EFB57541.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331359|gb|EFB60873.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595860|gb|EFC00824.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
C160]
gi|283790571|gb|EFC29388.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919947|gb|EFD97015.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|291095211|gb|EFE25476.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466451|gb|EFF08972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M809]
gi|295127642|gb|EFG57279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575681|gb|EFH94397.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
MN8]
gi|298694941|gb|ADI98163.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED133]
gi|312437871|gb|ADQ76942.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH60]
gi|315195573|gb|EFU25960.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 308
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|122844|sp|P22907|HEM3_MOUSE RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 361
Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+
Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353
>gi|20149500|ref|NP_000181.2| porphobilinogen deaminase isoform 1 [Homo sapiens]
gi|1170217|sp|P08397|HEM3_HUMAN RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|12653497|gb|AAH00520.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|14198180|gb|AAH08149.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|17939638|gb|AAH19323.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|119587851|gb|EAW67447.1| hydroxymethylbilane synthase, isoform CRA_a [Homo sapiens]
gi|158261573|dbj|BAF82964.1| unnamed protein product [Homo sapiens]
gi|312152370|gb|ADQ32697.1| hydroxymethylbilane synthase [synthetic construct]
Length = 361
Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats.
Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353
>gi|301788448|ref|XP_002929638.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Ailuropoda
melanoleuca]
Length = 361
Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L + P I+ +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIRVTAQLEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPREAQLAAENLGISLASLLLNKGAKNILDV 353
>gi|301788450|ref|XP_002929639.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Ailuropoda
melanoleuca]
Length = 344
Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L + P I+ +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIRVTAQLEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPREAQLAAENLGISLASLLLNKGAKNILDV 336
>gi|188585750|ref|YP_001917295.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|229836110|sp|B2A1G7|HEM3_NATTJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|179350437|gb|ACB84707.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 311
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 7/306 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL L + P I I + TKGD++ N +L+++GGKGLF
Sbjct: 2 KLRIGTRRSQLALDQTNWVVEQLKTHY--PDIEIEIKKIETKGDQLLNVSLSKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI+ L+ GEID AVHS KD+PT+ + L+I A R D D IS+ ++ +L +
Sbjct: 60 LKEIQNALLQGEIDLAVHSMKDIPTETTEDLEICAITKRVDPLDALISNNDITIDELPEN 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRR + L +R+D+ +I RG I TR+NKL + A++LA AG+ R
Sbjct: 120 AKIGTSSLRRGSQLKAYRNDLQIIPIRGNINTRMNKLQELPELDAVVLAKAGLVRSGMTD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + ++ E P PGQGA+ +E +N +E + V++ ++ ++ ERAFL L GS
Sbjct: 180 SISQNISPEIIVPCPGQGALGLEIRHDNENLKEKLAVLDDSESRKAIGAERAFLNRLGGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFI 299
C + +A + L+ G+V + DG+ + S + D +G D A+ + +
Sbjct: 240 CHVPVGAYAEIISNELHLTGVVASEDGQDVIKRSVQTHLSDNNKIPSTLGNDLAEELIEL 299
Query: 300 SNKNVF 305
+
Sbjct: 300 GANKIL 305
>gi|315658068|ref|ZP_07910940.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590]
gi|315496397|gb|EFU84720.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590]
Length = 310
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 170/304 (55%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L
Sbjct: 60 FVKEIQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPD 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S++GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ +
Sbjct: 120 GSIVGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ ++++ D V ER FLA +DG
Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDVELLALLNQVHNQQVADCVTAERTFLAAMDG 239
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A K + F G+++ DGK +E + GN + I +G + +
Sbjct: 240 SCQVPIGGYATNKTNGDIEFTGLIMTPDGKERYEHTEIGN--NPIELGNKVSDVLIEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|325291200|ref|YP_004267381.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271]
gi|324966601|gb|ADY57380.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271]
Length = 305
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 121/303 (39%), Positives = 175/303 (57%), Gaps = 5/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LA+ A + SL ++ P + V++P TKGD+I + L +IG KG
Sbjct: 2 KTIRIGTRESKLAIWQAEWVKDSLTSIY--PGIDCVLVPKKTKGDKIPDIPLPKIGDKGF 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FTEE+E+ L++GEID AVHS KD+P +L +GL I+AY R D RDVF L +L
Sbjct: 60 FTEELEQALLTGEIDLAVHSLKDLPVELPQGLSIAAYGERHDPRDVFFGKEGLPLAELPA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-ILLAYAGIKRLKKE 182
S+IGTSSLRR+ L R+D++ D RG ++TR +KL N++ A I+LA AG RL +
Sbjct: 120 GSMIGTSSLRRQCQLKYQRADLNFCDLRGNLDTRWDKLQNSRDMAGIVLAAAGALRLGWQ 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L + P+ GQG I IET + + +++++ +NH + + ER+FL L G
Sbjct: 180 DRITEFLAEDVVLPAVGQGIIAIETASHRTEIRQILQPLNHRPSELAGRAERSFLRSLGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C++ IA A + + G+V DGK +V+ G D G DAA I+ +
Sbjct: 240 GCQTPIAALAKVQEDRIQVTGMVAGMDGKNILKVTAEGF--DPEQTGADAAAQIKCLGAN 297
Query: 303 NVF 305
N+
Sbjct: 298 NLL 300
>gi|27468263|ref|NP_764900.1| porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57867145|ref|YP_188808.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A]
gi|251811065|ref|ZP_04825538.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875909|ref|ZP_06284776.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135]
gi|293366381|ref|ZP_06613060.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|38258087|sp|Q8CNY8|HEM3_STAES RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71152115|sp|Q5HNN3|HEM3_STAEQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|27315809|gb|AAO04944.1|AE016748_178 porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57637803|gb|AAW54591.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A]
gi|251805400|gb|EES58057.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294934|gb|EFA87461.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135]
gi|291319506|gb|EFE59873.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733769|gb|EGG70095.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU045]
gi|329737359|gb|EGG73613.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU028]
Length = 308
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 172/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+
Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DG
Sbjct: 180 NIVTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++
Sbjct: 240 SCQVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLKKQGA 297
Query: 302 KNVF 305
++
Sbjct: 298 YDII 301
>gi|73955044|ref|XP_546491.2| PREDICTED: similar to Porphobilinogen deaminase
(Hydroxymethylbilane synthase) (HMBS)
(Pre-uroporphyrinogen synthase) (PBG-D) [Canis
familiaris]
Length = 361
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIHITAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPREAQLAAENLGISLASLLLNKGAKNILDV 353
>gi|66933009|ref|NP_001019553.1| porphobilinogen deaminase isoform 2 [Homo sapiens]
Length = 344
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 336
>gi|145346959|ref|XP_001417948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578176|gb|ABO96241.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 325
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 175/306 (57%), Gaps = 6/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62
+IGTR SPLALA A+ TR L + + + I + T GD++ ++ L +IGGKG
Sbjct: 11 IVKIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKG 70
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL L
Sbjct: 71 LFTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLSQLP 130
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+
Sbjct: 131 EGAVVGTASLRRQSQLLYKFPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLA 190
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ K I+ E+ P+ QGAI I + K + +NHEDT +V ER+FLA LDG
Sbjct: 191 QHAKVIIPTEEMLPAVAQGAIGITCRAGDDKQLAFLAKLNHEDTRMAVEGERSFLAALDG 250
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI---GRDAAQYIRFI 299
SC++ IA + + F G++ + DGK E +R G DA ++ G+DA ++
Sbjct: 251 SCRTPIAAHCHLVDGKMQFRGLIASLDGKQVLETTREG-AWDAASLLDAGKDAGAELKGK 309
Query: 300 SNKNVF 305
+ + F
Sbjct: 310 APADFF 315
>gi|171463846|ref|YP_001797959.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193384|gb|ACB44345.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 321
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A + L ++ P ++ I+ ++T+GD+I +R L+++GGKGL
Sbjct: 14 KRLVIASRESRLAMWQAEHVQDCLKKLY--PDCDVQILGMTTRGDQILDRALSKVGGKGL 71
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L G D AVHS KD+P + +G ++ + RED RD F+S+ SL+DL +
Sbjct: 72 FVKELETALEDGRADLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEDLPI 131
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+++L + + RG ++TR+ KL+ + AI+LA AG+KRL E
Sbjct: 132 GAIVGTSSLRRESVLRAKFPHLVIQPLRGNLDTRMGKLDKGEYQAIILAAAGLKRLGLES 191
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + + P+ GQGA+ IET +P ++ + +N T +V+ ER +L GS
Sbjct: 192 RIRAFLPYDPYTPAAGQGALGIETLSKHPNIKQWLAPLNDLPTLFAVSAERMVSRQLGGS 251
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFIS 300
C+ +A A + + V ++DGK + + DA +G AQ +
Sbjct: 252 CEVPLAAHAVRDQNQMQIRSFVASTDGKAICLAHGSALVESVEDAEALGLAVAQDLLSQG 311
Query: 301 NKNVF 305
++
Sbjct: 312 AADLI 316
>gi|194334346|ref|YP_002016206.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271]
gi|238058997|sp|B4S922|HEM3_PROA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194312164|gb|ACF46559.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271]
Length = 312
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 114/307 (37%), Positives = 169/307 (55%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IGTR SPLAL A T++ L P +I + + T GD + + L++IG G
Sbjct: 2 KQQLIIGTRSSPLALWQAEFTKAELSK--NFPELDIQLKLIKTTGDVLLDSPLSKIGDMG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT++IEK L++ EID AVHS KD+PT+ +GL +SA+ RED RDV IS +LK L
Sbjct: 60 LFTKDIEKHLLAKEIDLAVHSLKDVPTETPEGLILSAFTEREDTRDVIISKNGDNLKQLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ I TSSLRR + LL R D + D RG + TR + + + A++LAYAG+ RL
Sbjct: 120 PNAKIATSSLRRTSQLLGIRPDFEMGDIRGNLNTRFKRFDESDFDAMILAYAGVHRLNFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I EIL + P+ GQGA+ IET +++ + +++VKV+N++++ ERA L L G
Sbjct: 180 DRISEILPHDVLLPAVGQGALGIETRIDDEQTRQIVKVMNNQNSEYCTKAERALLRHLQG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI----GRDAAQYIRF 298
C+ I +A K TL+ V + DGK A + G + A+ +
Sbjct: 240 GCQIPIGAYATYKNGTLHLSAFVGSVDGKRAIRNEITKENVTAPELAEKTGIELAEELMK 299
Query: 299 ISNKNVF 305
+
Sbjct: 300 QGANEIL 306
>gi|292386|gb|AAA60029.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 361
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353
>gi|54295573|ref|YP_127988.1| porphobilinogen deaminase HemC [Legionella pneumophila str. Lens]
gi|61213284|sp|Q5WT65|HEM3_LEGPL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|53755405|emb|CAH16901.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Lens]
Length = 309
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 158/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPQFKSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ V RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQVKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIYGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + L VL DG + + G +A I + +
Sbjct: 239 GGNCHIPFAVYCTITAENLLLLRAKVLNLDGSQMIDDEQQGKIEEAEIIADRCTESLMTK 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAMTLL 304
>gi|224510663|pdb|3EQ1|A Chain A, The Crystal Structure Of Human Porphobilinogen Deaminase
At 2.8a Resolution
gi|224510664|pdb|3EQ1|B Chain B, The Crystal Structure Of Human Porphobilinogen Deaminase
At 2.8a Resolution
Length = 361
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + +G + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353
>gi|219117329|ref|XP_002179459.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217409350|gb|EEC49282.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 329
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 121/307 (39%), Positives = 179/307 (58%), Gaps = 4/307 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGK 61
+P RIGTR SPLALA A+ETR L++ I I L T+GD I +++L E+GGK
Sbjct: 7 QPLRIGTRGSPLALAQAYETRKRLIENFPDLEAEGAIEICVLKTQGDMILDKSLMELGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLK 119
GLFT+E++ L+S E+D VHS KD+PT L G + LPRED D FI + ++
Sbjct: 67 GLFTKELDTALLSDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFIYKDDSVKRIE 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
D+ SVIGT+SLRR+A L+ + ++FRG ++TRL KL++ A LLA AG+KR+
Sbjct: 127 DIPDGSVIGTASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRM 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ IL ++ P+ QGAI I+ ++ ++ + + +NH +T V+CER FL
Sbjct: 187 DMDGCATSILEWDEMLPAVAQGAIGIQCRDDDERSLKYLAALNHPETKACVDCERGFLEA 246
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDG+CK+ IAG A + F G++ DG E G +A IGR+A + ++
Sbjct: 247 LDGNCKTPIAGQARIVDGKIMFRGLIAMPDGSKKFECESEGAIEEAAKIGREAGEGLKKE 306
Query: 300 SNKNVFN 306
+ + F
Sbjct: 307 AGEEFFQ 313
>gi|293374464|ref|ZP_06620786.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909]
gi|292646843|gb|EFF64831.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909]
Length = 301
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 105/294 (35%), Positives = 157/294 (53%), Gaps = 3/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL L H P + + TKGD I + +L +IG KGLF
Sbjct: 3 VVVGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
EIE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL
Sbjct: 61 REIEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++
Sbjct: 121 AKIGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEM 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C
Sbjct: 181 ISSYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+ + +G L G+ + +G G I +G + AQ++
Sbjct: 241 HIPMGAYCELEGDKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFVLK 294
>gi|109108914|ref|XP_001101764.1| PREDICTED: porphobilinogen deaminase isoform 6 [Macaca mulatta]
Length = 391
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 108/337 (32%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 49 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 106
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 107 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 166
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 167 LPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 226
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 227 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 286
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 287 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLV 346
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 347 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 383
>gi|21283343|ref|NP_646431.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2]
gi|49486497|ref|YP_043718.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297207616|ref|ZP_06924051.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300911698|ref|ZP_07129142.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH70]
gi|23821677|sp|Q8NW74|HEM3_STAAW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|55976400|sp|Q6G8Q5|HEM3_STAAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21204783|dbj|BAB95479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2]
gi|49244940|emb|CAG43401.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296887633|gb|EFH26531.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300887119|gb|EFK82320.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH70]
gi|323440785|gb|EGA98494.1| porphobilinogen deaminase [Staphylococcus aureus O11]
gi|323442940|gb|EGB00563.1| porphobilinogen deaminase [Staphylococcus aureus O46]
Length = 308
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|52842939|ref|YP_096738.1| porphobilinogen deaminase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630050|gb|AAU28791.1| porphobilinogen deaminase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 321
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 13 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L
Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 250
Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + L VL DG + + G +A I + +
Sbjct: 251 GGNCHIPFAVYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 310
Query: 300 SNKNVF 305
++
Sbjct: 311 GAMSLL 316
>gi|15924660|ref|NP_372194.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927249|ref|NP_374782.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
N315]
gi|148268151|ref|YP_001247094.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH9]
gi|150394218|ref|YP_001316893.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1]
gi|156979988|ref|YP_001442247.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3]
gi|253317186|ref|ZP_04840399.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006455|ref|ZP_05145056.2| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794056|ref|ZP_05643035.1| porphobilinogen deaminase [Staphylococcus aureus A9781]
gi|258415760|ref|ZP_05682031.1| porphobilinogen deaminase [Staphylococcus aureus A9763]
gi|258422003|ref|ZP_05684923.1| porphobilinogen deaminase [Staphylococcus aureus A9719]
gi|258438239|ref|ZP_05689523.1| porphobilinogen deaminase [Staphylococcus aureus A9299]
gi|258443697|ref|ZP_05692036.1| porphobilinogen deaminase [Staphylococcus aureus A8115]
gi|258444935|ref|ZP_05693255.1| porphobilinogen deaminase [Staphylococcus aureus A6300]
gi|258447989|ref|ZP_05696121.1| porphobilinogen deaminase [Staphylococcus aureus A6224]
gi|258454303|ref|ZP_05702272.1| porphobilinogen deaminase [Staphylococcus aureus A5937]
gi|269203288|ref|YP_003282557.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED98]
gi|282893166|ref|ZP_06301400.1| porphobilinogen deaminase [Staphylococcus aureus A8117]
gi|282929344|ref|ZP_06336911.1| porphobilinogen deaminase [Staphylococcus aureus A10102]
gi|295405981|ref|ZP_06815789.1| porphobilinogen deaminase [Staphylococcus aureus A8819]
gi|296274902|ref|ZP_06857409.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MR1]
gi|297245093|ref|ZP_06928970.1| porphobilinogen deaminase [Staphylococcus aureus A8796]
gi|54037282|sp|P64341|HEM3_STAAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54041349|sp|P64340|HEM3_STAAM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217788|sp|A7X391|HEM3_STAA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028098|sp|A6U2D8|HEM3_STAA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028160|sp|A5ITJ5|HEM3_STAA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|13701467|dbj|BAB42761.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
N315]
gi|14247442|dbj|BAB57832.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50]
gi|147741220|gb|ABQ49518.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|149946670|gb|ABR52606.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1]
gi|156722123|dbj|BAF78540.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3]
gi|257788028|gb|EEV26368.1| porphobilinogen deaminase [Staphylococcus aureus A9781]
gi|257839353|gb|EEV63826.1| porphobilinogen deaminase [Staphylococcus aureus A9763]
gi|257842047|gb|EEV66476.1| porphobilinogen deaminase [Staphylococcus aureus A9719]
gi|257848283|gb|EEV72274.1| porphobilinogen deaminase [Staphylococcus aureus A9299]
gi|257851103|gb|EEV75046.1| porphobilinogen deaminase [Staphylococcus aureus A8115]
gi|257856143|gb|EEV79058.1| porphobilinogen deaminase [Staphylococcus aureus A6300]
gi|257858750|gb|EEV81621.1| porphobilinogen deaminase [Staphylococcus aureus A6224]
gi|257863533|gb|EEV86292.1| porphobilinogen deaminase [Staphylococcus aureus A5937]
gi|262075578|gb|ACY11551.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED98]
gi|282589076|gb|EFB94177.1| porphobilinogen deaminase [Staphylococcus aureus A10102]
gi|282764484|gb|EFC04610.1| porphobilinogen deaminase [Staphylococcus aureus A8117]
gi|285817354|gb|ADC37841.1| Porphobilinogen deaminase [Staphylococcus aureus 04-02981]
gi|294968978|gb|EFG44999.1| porphobilinogen deaminase [Staphylococcus aureus A8819]
gi|297178173|gb|EFH37421.1| porphobilinogen deaminase [Staphylococcus aureus A8796]
gi|312830049|emb|CBX34891.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315130698|gb|EFT86684.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727593|gb|EGG64049.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21172]
Length = 308
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFINKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|302333336|gb|ADL23529.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 308
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + F G+++ DGK E + NG + + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTLNGT--NPVELGKKVSNKLKKQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|283470938|emb|CAQ50149.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ST398]
Length = 308
Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG
Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDDELLSLLSKVHNDEVAKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|329724698|gb|EGG61204.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU144]
Length = 308
Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 172/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKGL
Sbjct: 2 RKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+
Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRIGWSD 179
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DG
Sbjct: 180 NIVTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDG 239
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++
Sbjct: 240 SCQVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLKKQGA 297
Query: 302 KNVF 305
++
Sbjct: 298 YDII 301
>gi|260888475|ref|ZP_05899738.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185]
gi|330838215|ref|YP_004412795.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185]
gi|260861672|gb|EEX76172.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185]
gi|329745979|gb|AEB99335.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185]
Length = 311
Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 173/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K IGTR S LAL A + L + + P ++V ++TKGDR+ + L +IGG
Sbjct: 1 MKKDTIVIGTRSSKLALWQADYVEAKLRE--RYPELHVVQKRMTTKGDRVLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++GEID AVHS KDMPT+L +GL ++A R D D +S Q+L +
Sbjct: 59 KGLFTKELEQAMLAGEIDLAVHSLKDMPTELPEGLMLAAVTERFDPGDAVVSPRYQTLAN 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A LL R D+ ++ RG + TRL KL AI+LA AG+KRL
Sbjct: 119 LPQGAKVGTSSLRRRAQLLAKRPDLEIVSLRGNVNTRLKKLEEENFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I EIL E P+ GQGA+ IE ++ L+ ++ T + ERAFLA +
Sbjct: 179 FHDRITEILPREICLPAVGQGALAIEARADDEATLSLIAFLDDAATRAAARAERAFLARV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ + +A L ++ + DG+ + + G+ DA IGR A+ + +
Sbjct: 239 EGGCQVPVGVYAEAADEALEMEAVIASIDGERLYRKKKAGSALDAEKIGRALAEELLAMG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 GKEILQ 304
>gi|35309|emb|CAA28499.1| unnamed protein product [Homo sapiens]
Length = 361
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 107/337 (31%), Positives = 156/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWHNRVGQILHPEKCMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353
>gi|260893122|ref|YP_003239219.1| porphobilinogen deaminase [Ammonifex degensii KC4]
gi|260865263|gb|ACX52369.1| porphobilinogen deaminase [Ammonifex degensii KC4]
Length = 308
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 3/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ RIGTR S LALA + L + + P + I+ + T GD++ N L IGGK
Sbjct: 4 SKRCLRIGTRGSDLALAQTEQVLQILRE--RWPHYTYEIVKIKTTGDKVRNLALPRIGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E L+ +ID AVHS KD+PT+L + L + A LPRE DV IS T L+DL
Sbjct: 62 GLFTKELEVALLEEKIDLAVHSLKDLPTELPEELCVGAVLPREHPGDVLISLTGAGLEDL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+A L R D++ + RG + TRL KL + A++LA+AG++RL+
Sbjct: 122 PEGARIGTSSLRRQAQLKAARPDLNFVPLRGNVPTRLRKLEKGECEAVVLAWAGLRRLRL 181
Query: 182 EKVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + +L + P+ QGAI +E + + +++V+V++ T V ERAFL L
Sbjct: 182 DLTGRMTLLPYQVCLPAVAQGAIGVEMRKEDRELRKMVEVLDDPTTRLEVTAERAFLRWL 241
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C IA A G+ + G+V +GK +G+ +G A+ +
Sbjct: 242 GGGCHVPIAALARVAGAEILLEGLVADPEGKRIVRGQESGSTAYPEEVGIRLAERLLREG 301
Query: 301 NKNVF 305
+ +
Sbjct: 302 AEELL 306
>gi|11386777|sp|O69110|HEM3_PAEMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3172405|gb|AAC18587.1| porphobilinogen deaminase [Paenibacillus macerans]
Length = 324
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 111/324 (34%), Positives = 169/324 (52%), Gaps = 24/324 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEI 58
M K+ +GTR S LAL + L ++ + I + TKGDRI + TL++I
Sbjct: 1 MTKRTIVVGTRQSQLALTQTEQVIGDLKELCRAHGLPFEFEIKKIVTKGDRILDVTLSKI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +EIE+ ++ GEID AVHS KDMP+ L +GL R+D RD IS + L
Sbjct: 61 GGKGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLINGGVPLRKDPRDALISRSGLHL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L + +GTS+LRR + LL +R D+ + RG I++RL KL AI+LA AG++R
Sbjct: 121 HELPQGARVGTSTLRRSSQLLAYRPDLVLEPVRGNIDSRLRKLEEEGFDAIILAAAGLQR 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + L+ + P+ GQGA+ IE N+ + ++++ + N DT +V ER FLA
Sbjct: 181 MGWENRVTAYLSADVCLPAVGQGALGIECRENDAELRDVLSLYNDPDTALTVAAERRFLA 240
Query: 239 ELDGSCKSAIAGFAYCK--GST------------------LYFYGIVLASDGKIFHEVSR 278
L+G C+ IA +A + G + G+V ++DG+ + E
Sbjct: 241 VLNGGCQVPIAAYANLERAGGQAPEEGGRAAASQAPAALRIRLTGMVGSADGRGYFEGEC 300
Query: 279 NGNRCDAINIGRDAAQYIRFISNK 302
R D + G A + +
Sbjct: 301 R--REDPVAFGERIAGLLLAQGGR 322
>gi|149041454|gb|EDL95295.1| hydroxymethylbilane synthase, isoform CRA_a [Rattus norvegicus]
Length = 345
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 3 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 61 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 121 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRM 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 181 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 241 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 300
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 301 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 337
>gi|254522867|ref|ZP_05134922.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14]
gi|219720458|gb|EED38983.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14]
Length = 303
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 2/303 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL+ L +
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFALPAMLTRHDPADGFVSNLYASLEALPIG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGQR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L + P+P QGA+ +E N + L ++ T V ERA L GSC
Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAGLDDASTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A A +G L+ G+V ++ G D +G+ A + +
Sbjct: 241 HVPVAAIAQWQGDDLHLQGLVGSASDGRAVRAEAVGPASDPDALGQRVATMLLDAGAGEL 300
Query: 305 FNF 307
N
Sbjct: 301 LNV 303
>gi|91774391|ref|YP_544147.1| porphobilinogen deaminase [Methylobacillus flagellatus KT]
gi|123253776|sp|Q1GXA1|HEM3_METFK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91708378|gb|ABE48306.1| hydroxymethylbilane synthase [Methylobacillus flagellatus KT]
Length = 310
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 158/302 (52%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A + L ++ P + I+ ++T GD+I + L IGGKGL
Sbjct: 5 KTLVIASRESALAMWQAQYIQGRLQTLY--PETEVTILGMTTTGDQILDSPLARIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P L G ++A R+D RD F+S+ +L L
Sbjct: 63 FVKELEQALADGRADLAVHSMKDVPMHLPPGFALAAISERDDPRDAFVSNDYPNLASLPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 123 GSIVGTSSLRRQSQLQARFPGLKVESLRGNLQTRLRKLDEGQYAAIILAAAGLKRLGLAS 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+E ++ ++ P+ GQGA+ IE + +++ +NH +T V ER L GS
Sbjct: 183 RIRESIDPDNSIPAVGQGALGIEINAERLDLLKVLAPLNHPETAACVEAERGMSRALAGS 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + FA G TL G V + DGK F S G +G+ A + +
Sbjct: 243 CQVPLGAFAQQHGDTLQMTGFVASIDGKEFLRESVQGPAEQPEALGQALAAKLVALGADR 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|292385|gb|AAA60030.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 344
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R+
Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 336
>gi|78214363|ref|NP_037300.2| porphobilinogen deaminase [Rattus norvegicus]
gi|56789892|gb|AAH88162.1| Hydroxymethylbilane synthase [Rattus norvegicus]
Length = 361
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353
>gi|2506505|sp|P19356|HEM3_RAT RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|1911164|emb|CAA72734.1| hemC [Rattus sp.]
Length = 361
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353
>gi|218885688|ref|YP_002435009.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226740632|sp|B8DKW2|HEM3_DESVM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218756642|gb|ACL07541.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 317
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 114/307 (37%), Positives = 159/307 (51%), Gaps = 7/307 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A +S + H P ++ ++ L T+GD I + L ++GGKGL
Sbjct: 2 KKLVIATRGSKLALWQAEHVKSCIEGQH--PGVSVELLVLKTRGDIILDVPLAKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D F+S SL L
Sbjct: 60 FVKEIEEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHDSLAALPH 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR++ LL R D++V+ RG ++TRL KL+ + AI++A AG+KRL
Sbjct: 120 GATVGTSSLRRQSQLLALRPDLNVVSLRGNVDTRLRKLSEGQFDAIIMATAGMKRLGLSA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E+L F P+ GQGA+ IE + EL+ + H T V ER FLA L G
Sbjct: 180 PRSEVLGPPAFLPAVGQGALGIEFRADRADLHELLAFMEHTPTRIRVEAERGFLAGLQGG 239
Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRF 298
C+ IAG A G T G+V G + NG + A IG D A +
Sbjct: 240 CQVPIAGHAVMTGDGTFALEGLVADLTGARVIRRTMNGVSAPDGAQARQIGLDLAAQLVA 299
Query: 299 ISNKNVF 305
+
Sbjct: 300 DGAGEIL 306
>gi|109108912|ref|XP_001101850.1| PREDICTED: porphobilinogen deaminase isoform 7 [Macaca mulatta]
Length = 361
Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats.
Identities = 108/337 (32%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353
>gi|54298727|ref|YP_125096.1| porphobilinogen deaminase [Legionella pneumophila str. Paris]
gi|61213295|sp|Q5X1F2|HEM3_LEGPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|53752512|emb|CAH13944.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Paris]
Length = 309
Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPRFKSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + L VL DG + + G +A I + +
Sbjct: 239 GGNCHIPFAVYCTITAEKLLLLRAKVLNLDGSQMIDDEQQGKIEEAEIIADRCTESLMTK 298
Query: 300 SNKNVF 305
++
Sbjct: 299 GAMSLL 304
>gi|312964492|gb|ADR30032.1| porphobilinogen deaminase [Ovis aries]
Length = 350
Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats.
Identities = 105/337 (31%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 8 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE D + H ++L+
Sbjct: 66 FTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLET 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 126 LPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL
Sbjct: 186 GWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRH 245
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + +G + + +G D
Sbjct: 246 LEGGCSVPVAVHTAIKDGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQLV 305
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 306 GITARNIPRQPQLAAENLGISLATLLLNKGAKNILDV 342
>gi|253997747|ref|YP_003049810.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4]
gi|253984426|gb|ACT49283.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4]
Length = 320
Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF
Sbjct: 12 KLVIASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L
Sbjct: 70 VKELEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 130 SIVGTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC
Sbjct: 190 IAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A +G + +G V + DGK GN +G+ AQ + +
Sbjct: 250 TVPLGAYATKQGENITIHGFVASVDGKQMLRAEATGNAAQPELLGQQLAQSLIARGADKI 309
Query: 305 FN 306
Sbjct: 310 LQ 311
>gi|325841152|ref|ZP_08167277.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1]
gi|325490009|gb|EGC92355.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1]
Length = 301
Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats.
Identities = 105/294 (35%), Positives = 157/294 (53%), Gaps = 3/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL L H P + + TKGD I + +L +IG KGLF
Sbjct: 3 VVVGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
EIE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL
Sbjct: 61 REIEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++
Sbjct: 121 AKIGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEM 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C
Sbjct: 181 ISSYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+ + +G L G+ + +G G I +G + AQ++
Sbjct: 241 HIPMGAYCELEGEKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFVLK 294
>gi|258591837|emb|CBE68140.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [NC10 bacterium
'Dutch sediment']
Length = 315
Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++GTR SPLAL A L + P ++ I+P+ T GD+ + L+++GG
Sbjct: 1 MRSHTVKLGTRGSPLALCQAGLVTEELRR--RWPDLDVTIVPIKTSGDKFLDVVLSQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ G ID AVHS KD+P +L GL A + RED D ++ D
Sbjct: 59 KGLFVKEIEEALLDGRIDLAVHSLKDLPAELAPGLCEGAVMRREDPLDALVARNGLRFTD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR+ L R D+ + RG ++TRLNKL A++LA AG+ RL
Sbjct: 119 LPRGARIGTSSLRRQVQFLHCRPDLQIESLRGNVQTRLNKLETLGLEAVVLAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L + P+ GQGA+ IE ++ + E V+ +NH +T + ERAFL L
Sbjct: 179 LQDRITERLQPDLCLPAIGQGALVIEIREDDRQTAERVETLNHRETRQATTAERAFLRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC + IA F +G TL G+V DGK + G +G+ A +
Sbjct: 239 GGSCVTPIAAFGRLEGETLELTGMVAGLDGKRLLRQAVVGEAGAPEQVGQTLADRLLSAG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AGEII 303
>gi|325266571|ref|ZP_08133248.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394]
gi|324982014|gb|EGC17649.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394]
Length = 313
Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 158/303 (52%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGL
Sbjct: 5 QKLTIASRESALAMWQAEHIQAKLQALY--PSCTVDILGMTTQGDQILDKTLSKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L D AVHS KD+P L +G + A R + D +S+ + L++L
Sbjct: 63 FIKELETALQENRADLAVHSLKDVPMDLPEGFVLVAVGERANPFDALVSNRFERLEELPE 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A L + V RG ++TRL KL+N AI+LA AG++RL+
Sbjct: 123 GAVVGTSSLRREAQLRARFPHLQVKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLQLHG 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS
Sbjct: 183 RIRNLLPPSDSLPAAGQGALGIEIAAHRTDLVDILLPLNHAQTAACVTAERALARALGGS 242
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + + L +G+V DG + + A +GR A+ + +
Sbjct: 243 CQVPLGAYCTADEYGLLTLHGLVAHPDGSVVMTANAQAPAPYADALGRAVAKKLSDDGAR 302
Query: 303 NVF 305
V
Sbjct: 303 EVI 305
>gi|315635705|ref|ZP_07890968.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22]
gi|315480002|gb|EFU70672.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22]
Length = 312
Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats.
Identities = 111/309 (35%), Positives = 162/309 (52%), Gaps = 8/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL + ++ L++ + P I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKARLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++
Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L
Sbjct: 117 LPKGAVVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
E +K + PS GQ + IET N+PK E++KV+N + ER+F+
Sbjct: 177 IENEVKYFSPISTDVMIPSMGQATLGIET-TNDPKVLEILKVLNDNNAHIESTIERSFVD 235
Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L G C+ I A +++ IV DG + + D IG++ AQ
Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFI 295
Query: 298 FISNKNVFN 306
K +
Sbjct: 296 DQGAKELLE 304
>gi|169831506|ref|YP_001717488.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator
MP104C]
gi|238058920|sp|B1I4L8|HEM3_DESAP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169638350|gb|ACA59856.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator
MP104C]
Length = 309
Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 158/303 (52%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ +GTR S LALA A L + P + V + T GD I L +IG KG
Sbjct: 2 RREVVVGTRGSRLALAQADWVIDHLRA--RYPRVSFVRKEIRTTGDNILEVALAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ L+ EID AVHS KD+PT L +GL I A RE DVFIS + L++L
Sbjct: 60 LFTKELEQALLHREIDLAVHSMKDLPTGLPEGLVIGAVSVREYPGDVFISRGGERLEELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR A LL +R D+ VI RG ++TRL KL+ A++LA+AG+ RL
Sbjct: 120 AGAVLGTSSLRRTAQLLAYRPDLQVIPVRGNVQTRLRKLDEGVVDALVLAWAGLFRLGLT 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + + + P+ GQGA+ IE ++ + E+++ I+H T +V ER L L+G
Sbjct: 180 ERVTHRIPVAMCLPAVGQGALGIEARADDAEILEMLRTIDHAPTRAAVQAERTLLRRLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + + L +V + DG +G +G A + +
Sbjct: 240 GCQVPVGALGRFRDGRLVLEAVVASLDGTELVRAQESGPADRPEALGNSLAVRLLEMGAG 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|157736544|ref|YP_001489227.1| porphobilinogen deaminase [Arcobacter butzleri RM4018]
gi|167008810|sp|A8ERI4|HEM3_ARCB4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157698398|gb|ABV66558.1| porphobilinogen deaminase [Arcobacter butzleri RM4018]
Length = 312
Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats.
Identities = 111/309 (35%), Positives = 162/309 (52%), Gaps = 8/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL + +S L++ + P I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKSRLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++
Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L
Sbjct: 117 LPKGAIVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
E +K + PS GQ + IET N+PK E++KV+N + ER+F+
Sbjct: 177 IENEVKYFSPISTDIMIPSMGQATLGIET-TNDPKVLEILKVLNDNNAHIESTVERSFVD 235
Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L G C+ I A +++ IV DG + + D IG++ AQ
Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFI 295
Query: 298 FISNKNVFN 306
K +
Sbjct: 296 DQGAKELLE 304
>gi|308803813|ref|XP_003079219.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri]
gi|116057674|emb|CAL53877.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri]
Length = 441
Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats.
Identities = 120/306 (39%), Positives = 174/306 (56%), Gaps = 6/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62
RIGTR SPLALA A+ TR L + + + I + T GD++ ++ L +IGGKG
Sbjct: 46 IVRIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKG 105
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL DL
Sbjct: 106 LFTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLDDLP 165
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+
Sbjct: 166 EGAVVGTASLRRQSQLLYKYPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLA 225
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ K I+ E P+ QGAI I + K + +NHEDT +V ERAFLA LDG
Sbjct: 226 QHAKLIIPTEQMLPAVAQGAIGITCRGGDDKQLAFLAKLNHEDTRMAVEGERAFLAALDG 285
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI---GRDAAQYIRFI 299
SC++ IA + + F G++ + DGK E +R G DA ++ G DA ++
Sbjct: 286 SCRTPIAAHCHNVDGKMQFRGLIASLDGKEVLETTREG-AWDAASLLAAGTDAGAELKGK 344
Query: 300 SNKNVF 305
+ + F
Sbjct: 345 APADFF 350
>gi|332764355|gb|EGJ94590.1| porphobilinogen deaminase [Shigella flexneri 2930-71]
Length = 273
Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats.
Identities = 97/263 (36%), Positives = 144/263 (54%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TRL+KL+
Sbjct: 61 REDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ +N
Sbjct: 121 NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H +T V ERA L+G C+ I +A ++ +V A DG R G
Sbjct: 181 HHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAP 240
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
DA +G A+ + + +
Sbjct: 241 QDAEQMGISLAEELLNNGAREIL 263
>gi|224083036|ref|XP_002187797.1| PREDICTED: hydroxymethylbilane synthase [Taeniopygia guttata]
Length = 371
Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L +++ P + I+ +ST GD+I + L++IG K L
Sbjct: 29 RAIRVGTRRSQLARIQTDSVVTMLRELY--PDLHFEIVAMSTTGDKILDTALSKIGEKSL 86
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L I A RE+ D + H ++L
Sbjct: 87 FTKELENALERNEVDLVVHSLKDLPTSLPPDFTIGAVCKRENPLDAVVFHPKNCGKTLSL 146
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRL 179
L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR+
Sbjct: 147 LPEKSVIGTSSLRRAAQLKKKFPHLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRM 206
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I ++L+ ED + GQGA+ +E + + +V ++ DT ERAF+
Sbjct: 207 GWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKR 266
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 267 LEGGCSVPVAVNTLLKDGQLYLTGAVYSLDGSDSLKETMQTGVSYPHQNEDGPNDDVQHV 326
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G + A + K++ +
Sbjct: 327 GITAKNVPGQAQEAAENLGVELASLLLSKGAKHILSV 363
>gi|35307|emb|CAA27801.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 156/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + K + +
Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKTILDV 336
>gi|299822782|ref|ZP_07054668.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601]
gi|299816311|gb|EFI83549.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601]
Length = 311
Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 163/306 (53%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +G+R S LAL + L + P + I + TKGD+I + TL+++GGKG
Sbjct: 2 KSQIIVGSRRSKLALVQTNWVINELKKHY--PTIDFRIEEMVTKGDKILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E+E+ L+ ID AVHS KD+P + +GL I+A RE DVF+ DL
Sbjct: 60 LFVSEVEQALVDKHIDFAVHSMKDVPAVIEEGLTIAAIPERESANDVFVFKEVHDFGDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
++IGTSSLRR + +L R D+ + RG I+TRL KL AI+LA AG+ R+
Sbjct: 120 TQAIIGTSSLRRASQILAERPDLQIKFIRGNIDTRLRKLREEDFDAIILAQAGLSRMGWL 179
Query: 182 --EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + + P+ GQGA+ IE + +++++ I+H T + V ERAFL
Sbjct: 180 EDDSLRIQTIPETICLPAVGQGALAIECREEDNDTKDILRSIHHAITANCVAAERAFLKT 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAG+A GS + F G+V DGK E R G DA IG +AA +
Sbjct: 240 LNGGCEIPIAGYATQSGSKVSFKGLVGTPDGKTIWEAERVG--EDADQIGTEAANELLEK 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GAGALI 303
>gi|115378196|ref|ZP_01465368.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|310820650|ref|YP_003953008.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|115364784|gb|EAU63847.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|309393722|gb|ADO71181.1| Porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
Length = 314
Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 162/303 (53%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR SPLAL A + L H P ++ ++ ++T+GDR + L+ +GGKG
Sbjct: 2 SRLVRIATRQSPLALWQARHVGALLTAQH--PGLSVSLVEMTTEGDRFLSAPLSSVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KDM + L +GL ++A RED RD F S T +L L
Sbjct: 60 LFVKEIEQALLDGRADIAVHSLKDMTSVLPEGLMLAAVPVREDPRDAFCSPTGLTLDRLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR +L WR D+ ++ RG ++TRL K + +LA+AG+KRL E
Sbjct: 120 QGARVGTSSLRRSCILRSWRKDLEIVSLRGNVQTRLQKTRDLGLAGTVLAHAGLKRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E+L+ P+ GQG + I+ + + + L+ + T +V ERA LA+L+G
Sbjct: 180 REISEVLSPSVSLPAVGQGVLAIQCRTEDAEVRALLGPLEDAVTRVAVTAERALLAKLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
CK +AG A + ++ G V DG G +A +G A+ +
Sbjct: 240 GCKVPLAGHATVEQGRVHLRGFVGRPDGTQVVAGEVRGTAKEAQALGEALAEDLLSRGAG 299
Query: 303 NVF 305
+
Sbjct: 300 EIL 302
>gi|21241393|ref|NP_640975.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str.
306]
gi|23821681|sp|Q8PPR3|HEM3_XANAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21106726|gb|AAM35511.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str.
306]
Length = 304
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + +L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVADALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRVCVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D +GR AQ + +
Sbjct: 241 HVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|109108922|ref|XP_001101575.1| PREDICTED: porphobilinogen deaminase isoform 4 [Macaca mulatta]
gi|109108924|ref|XP_001101668.1| PREDICTED: porphobilinogen deaminase isoform 5 [Macaca mulatta]
Length = 344
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 108/337 (32%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 336
>gi|291612739|ref|YP_003522896.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1]
gi|291582851|gb|ADE10509.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1]
Length = 314
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 162/300 (54%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + TL++IGGKGLF
Sbjct: 12 LVIASRESALAMWQAEHIRDRLRALY--PQTSVSILGMTTQGDQILDVTLSKIGGKGLFV 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L +G D AVHS KD+P L +G ++ RED RD F+S+ +L L S
Sbjct: 70 KELETALENGSADIAVHSLKDVPMNLPEGFALACIGEREDPRDAFVSNRFDNLAALPAGS 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+KRL + I
Sbjct: 130 VVGTSSLRRESQLRARFPHLKIEPLRGNVQTRLRKLDEGQYAAIILAAAGLKRLGLGERI 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +++ ++ P+ GQGA+ IET + P + ++ ++H DT V ERA L GSC+
Sbjct: 190 RAVISSDESLPAVGQGALGIETRADRPDLKAVLAPLHHADTAACVLAERAMSRALAGSCQ 249
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ GFA + L G V DG G+ +G AQ + +
Sbjct: 250 VPLGGFAEVQNGKLRMRGFVATPDGTRLLRAEHVGDIAQPEALGDLVAQDLLRQGAGEIL 309
>gi|297690413|ref|XP_002822613.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Pongo abelii]
Length = 361
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 107/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWHNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMHATIHVPAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353
>gi|114051169|ref|NP_001039672.1| porphobilinogen deaminase [Bos taurus]
gi|109892198|sp|Q2KIN5|HEM3_BOVIN RecName: Full=Porphobilinogen deaminase; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS
gi|86438293|gb|AAI12574.1| Hydroxymethylbilane synthase [Bos taurus]
gi|296480113|gb|DAA22228.1| porphobilinogen deaminase [Bos taurus]
Length = 361
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE D + H ++L+
Sbjct: 77 FTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL
Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + +G + + +G D
Sbjct: 257 LEGGCSVPVAVHTAIKDGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPRQPQLAAENLGISLATLLLNKGAKNILDV 353
>gi|152990765|ref|YP_001356487.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2]
gi|166217777|sp|A6Q3S1|HEM3_NITSB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151422626|dbj|BAF70130.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2]
Length = 310
Score = 347 bits (892), Expect = 8e-94, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 163/305 (53%), Gaps = 10/305 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + ++ L + + + TKGD+I + L IGGKGLF
Sbjct: 2 KLTIATRGSKLALWQSNHIKAQLESF----GYEVELKIFKTKGDKILDTPLALIGGKGLF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E ++ GE D AVHS KD+PT+L +GL + A RE D +S ++L DL +
Sbjct: 58 TKELEDAMLRGEADLAVHSLKDVPTELPEGLVLGAITKREMTNDSLLSEQYETLADLPPN 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT+SLRR+ LL R DI + D RG ++TR+NKL N + AI+LAYAG+KRL +
Sbjct: 118 AVVGTTSLRRRMQLLHLRPDICIKDLRGNVDTRINKLKNGEFDAIILAYAGLKRLGILES 177
Query: 185 IKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ + I++ P+ GQ A+ IE P ++VK +N E + ER F+ L G
Sbjct: 178 VRYVHPIDENTMIPAMGQAALGIECR---PDVVDVVKKLNDEKSAIETFIERDFIDRLQG 234
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I A + + + ++ DG + G++ + +G++ A+ +
Sbjct: 235 GCQVPIGVRASLLENNDIIVKAVIGLPDGSELLKDKIFGSKENYHELGKELAESMIDNGA 294
Query: 302 KNVFN 306
K +
Sbjct: 295 KELLQ 299
>gi|153004241|ref|YP_001378566.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5]
gi|152027814|gb|ABS25582.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5]
Length = 313
Score = 347 bits (892), Expect = 9e-94, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 150/300 (50%), Gaps = 3/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L K P + + L TKGDRI L E+GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVADLLRA--KEPGLEVRLHELVTKGDRILEVPLAEVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P +L GL I A RED RD S ++L L +
Sbjct: 60 KEIEDALLASDAEIAVHSMKDLPAELAPGLAIGAVPEREDPRDALCSPRYKTLAGLPRGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 KVGTSSLRRGAQLKALRPDLQLEMVRGNVETRLRK-ASEALDAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E + + + H +T + ER FL ++G C+
Sbjct: 179 TYVFPAEEMLPAVAQGALALEARAADAPTMARLAALEHPETRVRIEAERGFLGRIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAG A +G + +V + DG R+G DA +G A+ + +
Sbjct: 239 VPIAGHATVQGGRVSMRALVASLDGTRVIRGERSGPAADARQLGIALAEELLSKGAAEIL 298
>gi|126733455|ref|ZP_01749202.1| porphobilinogen deaminase [Roseobacter sp. CCS2]
gi|126716321|gb|EBA13185.1| porphobilinogen deaminase [Roseobacter sp. CCS2]
Length = 311
Score = 347 bits (892), Expect = 9e-94, Method: Composition-based stats.
Identities = 131/301 (43%), Positives = 175/301 (58%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PF IGTR SPLALA A ETRS LM +P I + GD I +R L EIGGKGLF
Sbjct: 11 PFNIGTRGSPLALAQAHETRSRLMAAFNLPEEAFAICVIKVTGDAIQDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+ G ID AVHS KDMP GL + YLPRED+RD F+S A SL DLA
Sbjct: 71 TREIEEALLDGSIDIAVHSMKDMPVDQPGGLLLDTYLPREDVRDAFVSLNASSLNDLAEG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR++ LL R D+++++FRG ++TRL KL + A A LA AG+ RL V
Sbjct: 131 ATVGTSSLRRRSQLLAKRPDLNIVEFRGNVQTRLKKLGDGVAEATFLAMAGLNRLHMTDV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QGAI IE ++ +A ++ I+ T + ER+FLA LDGSC
Sbjct: 191 PRTAVAPEDMLPAVAQGAIGIERRGDDSRAAAMLDAIHDHATGRRLAAERSFLAALDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ I G A G ++ G +L +DG +G+ D +G A + + +
Sbjct: 251 ETPIGGLAELDGGSIRLRGEILRTDGTEVFADDMSGSIEDGPAMGHAMAAKLLEKAGPDF 310
Query: 305 F 305
F
Sbjct: 311 F 311
>gi|242309899|ref|ZP_04809054.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489]
gi|239523196|gb|EEQ63062.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489]
Length = 314
Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 6/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IGTR S LAL A + +L + + + + + TKGD+I + L +IGGKGL
Sbjct: 2 KKIIIGTRGSVLALWQANFVKRALEEQYS--NLEVELKIVKTKGDKILDVPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ ++ GEID AVHS KD+P + ++ L ++A RED+RD F+S +SL++L
Sbjct: 60 FTKELEELMLKGEIDIAVHSLKDVPVEFVENLGLAAITKREDVRDSFLSFKYKSLEELPS 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR + R D+ I RG ++TRL +L AI+LA AG+ RL E
Sbjct: 120 GAKVGTTSLRRVMQIHTLRKDLDCISLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIEN 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I I+ ++ P+ GQ A+ IE + + K E++ +N + + ER F+ L+G
Sbjct: 180 EIPYIIPLDFMIPAMGQAALGIECRM-DSKVVEMLDFLNDKKACFETSAEREFVRTLEGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFIS 300
C+ I A + + L ++ DG S+ + IGR A +
Sbjct: 239 CQVPIGVNANLENNLLSIKAVLGIPDGTKCLRDSKEVQVQGVEECRQIGRKLALEMIDKG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AREILQ 304
>gi|99082369|ref|YP_614523.1| porphobilinogen deaminase [Ruegeria sp. TM1040]
gi|99038649|gb|ABF65261.1| porphobilinogen deaminase [Ruegeria sp. TM1040]
Length = 318
Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 133/306 (43%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMPT +GL + YLPRED+RD F+S S+ D
Sbjct: 71 KGLFTKEIEEALLSGGIDIAVHSMKDMPTLQPEGLTLDCYLPREDVRDAFVSPGIHSIAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL N A A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLENGVASATFLAMAGLRRLD 190
Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E V ++++D P+ QGAI IE ++ +++ I+H +T + ERAFLA
Sbjct: 191 MAEAVPATPISVDDMLPAVAQGAIGIERRSSDITTAAMLEAIHHAETSLRLAAERAFLAA 250
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IA A G T+ G +L DG ++G D +GR + +R
Sbjct: 251 LDGSCETPIAALADLSGGTIQLRGQILRPDGSEALSDEQDGAIEDGAELGRQMGETLRAR 310
Query: 300 SNKNVF 305
+ F
Sbjct: 311 AGAGFF 316
>gi|297690415|ref|XP_002822614.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Pongo abelii]
gi|297690417|ref|XP_002822615.1| PREDICTED: porphobilinogen deaminase-like isoform 3 [Pongo abelii]
gi|297690419|ref|XP_002822616.1| PREDICTED: porphobilinogen deaminase-like isoform 4 [Pongo abelii]
Length = 344
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 107/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 180 GWHNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMHATIHVPAQHEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 336
>gi|291412990|ref|XP_002722769.1| PREDICTED: hydroxymethylbilane synthase [Oryctolagus cuniculus]
Length = 365
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 23 RVIRVGTRKSQLARIQTDSVVATLKTLY--PGLRFEIIAMSTTGDKILDTALSKIGEKSL 80
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G + A RE+ D + H ++L
Sbjct: 81 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTVGAICKRENPCDAVVFHPKFVGKTLAT 140
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 141 LPERSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEQQEFSAIILAVAGLQRM 200
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 201 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLKH 260
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 261 LEGGCSVPVAVHTAMKDGQLYMTGGVWSLDGSDTMQETMQASIQVPAQHEDGPEDDPQLV 320
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 321 GITARNIPRGPQLAAENLGISLANLLLNKGAKNILDV 357
>gi|229543656|ref|ZP_04432716.1| porphobilinogen deaminase [Bacillus coagulans 36D1]
gi|229328076|gb|EEN93751.1| porphobilinogen deaminase [Bacillus coagulans 36D1]
Length = 310
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L + P I ++TKGD++ + TL+++GGKGL
Sbjct: 2 RTIVVGSRRSKLALTQTKWVVAKLEQLGL--PFRFEIREITTKGDKVLDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE +++ EID AVHS KD+P L GL I RED+RD IS L
Sbjct: 60 FVKEIEDAMLNHEIDMAVHSMKDVPAVLPDGLVIGCIPEREDVRDALISKNGTPFSSLKE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+V+GTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+KR+
Sbjct: 120 GAVVGTSSLRRGAQLLAVRSDIRIKSVRGNIDTRLEKLKNGDYDAIVLAAAGLKRMGWSA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E + + P+ GQGA+ +E ++ + + ++ ++ +T ++V ER FL +++G
Sbjct: 180 DTVTEFFDPDICLPAIGQGALAVECRADDGELLDALRKLDSAETAETVKAERVFLDKMEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG A + +V + DGK ++ + + + + G AA + K
Sbjct: 240 GCQVPIAGLAKKTAEGISLTALVASPDGKTVYKETVVSH--NPVTAGEKAADILSRQGAK 297
Query: 303 NVFN 306
+
Sbjct: 298 ALIE 301
>gi|61213316|sp|Q5ZRY6|HEM3_LEGPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + L VL DG + + G +A I + +
Sbjct: 239 GGNCHIPFAVYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 298
Query: 300 SNKNVF 305
++
Sbjct: 299 GAMSLL 304
>gi|102139875|gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 426
Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats.
Identities = 126/301 (41%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
R SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGLFT+EI
Sbjct: 123 RDSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGLFTKEI 182
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L SV+G
Sbjct: 183 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 242
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + +
Sbjct: 243 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 302
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+C++ I
Sbjct: 303 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPI 362
Query: 249 AGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVF 305
A +AY + F G++ + DG E +R+G D + +G+DA ++ + F
Sbjct: 363 AAYAYRDEDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFF 422
Query: 306 N 306
+
Sbjct: 423 D 423
>gi|254498735|ref|ZP_05111451.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12]
gi|254352063|gb|EET10882.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12]
Length = 309
Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A R L + + P + ++P++T GD+ L +GG
Sbjct: 1 MNSRIIHIATRQSPLALWQANHVRGLL--LKQWPMLQVELLPMTTSGDKFLKDKLLAVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHSAKDMP + GL ++A R++ DV +S L D
Sbjct: 59 KGLFVKELEEALLDNRADIAVHSAKDMPAEFPAGLGLAAICKRDNPFDVLVSKHYAKLVD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR++ LL +R D+ + RG I TRL KL + + AI+LA AG++R+
Sbjct: 119 LPQQAIVGTGSLRRQSQLLAYRPDLCIKPLRGNINTRLAKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ + P+ QGA+ IE + + EL+ +N + V+ ER A L
Sbjct: 179 FNHAISEQLSEQIMLPACAQGALAIECRTEDQEIHELLAGLNDPLSAVCVHTERQVNALL 238
Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C +A F A + L+ +L DG + + G A + + AQ +
Sbjct: 239 GGNCHVPLAVFCAPTTSNQLFLQAKILNQDGSKIIQNQQTGALDKATVLAYNCAQSLLTQ 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAATLL 304
>gi|148234672|ref|NP_001090881.1| porphobilinogen deaminase [Sus scrofa]
gi|112980813|gb|ABI29188.1| hydroxymethylbilane synthase [Sus scrofa]
Length = 361
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE D + H ++L+
Sbjct: 77 FTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRECPYDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + +G + + +G D
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLNGAESMQETMQATIHVPAQHEDGPEDDPQLV 316
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 317 GITARNIPREAQLAAENLGISLATLLLNKGAKNILDV 353
>gi|156742007|ref|YP_001432136.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941]
gi|189028097|sp|A7NKU8|HEM3_ROSCS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|156233335|gb|ABU58118.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941]
Length = 303
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 161/303 (53%), Gaps = 3/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IGTR S LAL R +L H P + + ++T+GD I +R L IG KG
Sbjct: 2 RNSLTIGTRASKLALVQTHMIRDALQAAH--PGLTVAVERITTRGDIILDRPLNAIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF EIE+ + +G +D AVHSAKD+P+ L + ++ R D RD ++ +L L
Sbjct: 60 LFVVEIEEAMRAGRVDLAVHSAKDLPSTLPPDMTLAVCPRRADPRDALVAQPGMTLASLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL E
Sbjct: 120 HGARVGTSSLRRACQLRALRPDLTLLDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+VI E+L + P+ GQG I +E + + L+ ++ ++ ERAFLA + G
Sbjct: 180 EVITELLEPDVLIPAVGQGIIGVEARAGDDEVLRLLAPLDDPAARAAITAERAFLARIGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + A +G L YG++ A DG+ R+G+ D +G A+ + +
Sbjct: 240 GCRVPVGALALLEGDELLLYGMIGALDGR-MVRGMRSGSASDPAGLGSALAEELLDAGGQ 298
Query: 303 NVF 305
+
Sbjct: 299 ALL 301
>gi|86158914|ref|YP_465699.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775425|gb|ABC82262.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 314
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P L GL +++ RED RD S ++L L +
Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLASVPQREDPRDALCSPRWKTLAALPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEVVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E ++ + + + +T + ER FLA ++G C+
Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLKRLAALEDPETRVRIEAERGFLARIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAG A G + +V + DG R G +A +G A+ + +
Sbjct: 239 VPIAGHATLAGGKITIRALVASLDGTRVIRGERTGAYAEARALGESLAEELLSRGADQIL 298
>gi|159900065|ref|YP_001546312.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779]
gi|159893104|gb|ABX06184.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779]
Length = 300
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 108/301 (35%), Positives = 164/301 (54%), Gaps = 3/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL R +L+ H P I + ++TKGD I +R L IG KGLF
Sbjct: 3 ILTIGTRKSQLALVQTHAMRDALLAAH--PQLTIELEHITTKGDAILDRPLAAIGDKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
EIE + +G++D AVHSAKD+P+ L + I+AY R D RDV + + L DL
Sbjct: 61 VSEIEDAMRNGKVDLAVHSAKDLPSILAPDMTIAAYPERADPRDVLVGAEGRRLADLVPG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS RR A L R D+++ID RG ++TRL KL+ + AI+LA AG++RL K
Sbjct: 121 AKVGTSSPRRAAQLRHLRPDLTIIDIRGNVDTRLRKLDEGQYDAIVLAAAGLQRLGLLKR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + + P+ QG + IE + + +L+KV++H ++ + E+AFLA + G C
Sbjct: 181 VTQFFEPAEMTPAVSQGILGIEARAGDQRVADLLKVLDHAESRATAEAEKAFLATIGGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ A+ FA + L+ G++ A DG+ G+ A +G AQ + + +
Sbjct: 241 QVAVGAFATYQIGQLHLIGMIGALDGR-LVRGELTGSASTAQALGTSLAQQLLAQGGREL 299
Query: 305 F 305
Sbjct: 300 L 300
>gi|294625631|ref|ZP_06704254.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292600054|gb|EFF44168.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 304
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 168/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D +GR AQ + +
Sbjct: 241 HVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|294666828|ref|ZP_06732061.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292603412|gb|EFF46830.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 304
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 169/301 (56%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADGLVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ + T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDADRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D +GR AQ + +
Sbjct: 241 HVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|259417591|ref|ZP_05741510.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B]
gi|259346497|gb|EEW58311.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B]
Length = 318
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 133/306 (43%), Positives = 182/306 (59%), Gaps = 5/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L SG ID AVHS KDMPT+ +GL + YLPRED+RD F+S +++ D
Sbjct: 71 KGLFTKEIEEALTSGGIDLAVHSMKDMPTEQPEGLMLDCYLPREDVRDAFVSPQIRAIAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLQDGVASATFLAMAGLRRLN 190
Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E+V + ED P+ QGAI IE ++ A +++ I+H +T + ERAFLA
Sbjct: 191 MAEEVPATPIAPEDMLPAVAQGAIGIERRSDDTTAAAMLEAIHHAETSLRLAAERAFLAA 250
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IA A G TL G +L DG ++ D +GR + +R
Sbjct: 251 LDGSCETPIAALADLSGGTLQLRGQILRPDGSEALADQQSCAIEDGAELGRRMGEALRAR 310
Query: 300 SNKNVF 305
+ + F
Sbjct: 311 AGEGFF 316
>gi|193215989|ref|YP_001997188.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110]
gi|238058923|sp|B3QWI1|HEM3_CHLT3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|193089466|gb|ACF14741.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110]
Length = 314
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 120/294 (40%), Positives = 172/294 (58%), Gaps = 6/294 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK IGTR SPLAL A ++ L + P +I + + T GD+I + L +IG KG
Sbjct: 2 KKALIIGTRSSPLALWQAEFIKAELSKHY--PSLDISLRHIKTTGDKILDAPLAKIGDKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE ++ EID AVHS KD+PT+ +GL I+A RED RDV IS +LK L
Sbjct: 60 LFTREIEHVMLRNEIDLAVHSLKDLPTETPEGLVITAITEREDNRDVLISKGKYTLKTLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++ TSSLRR++ LL R D+ VID RG + TR + A A+LLA+AG+ RL+
Sbjct: 120 QGAIVATSSLRRRSQLLHLRPDLEVIDMRGNLNTRFKRFEEGDAEAMLLAFAGVHRLEFS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I EI++ +D P+ GQGA+ IET +++ + +EL+KV+NH +T CER+ L L+G
Sbjct: 180 EHIAEIISFDDILPAVGQGALGIETRIDDEETRELLKVLNHAETELCTKCERSLLRTLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDA 292
C+ I A + T +F V + DGK + S + +A IG +
Sbjct: 240 GCQIPIGAHARIENGTFHFATYVGSIDGKRAIKKSLSRENVTTVEEAEQIGIEV 293
>gi|118101810|ref|XP_417846.2| PREDICTED: similar to Hydroxymethylbilane synthase [Gallus gallus]
Length = 358
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 156/338 (46%), Gaps = 35/338 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA L + + P I+ +ST GD+I + L++IG K
Sbjct: 15 SRAIRVGTRRSQLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKS 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 73 LFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLS 132
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKR 178
L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 133 VLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKR 192
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E I ++L+ ED + GQGA+ +E + + +V + +T ERAF+
Sbjct: 193 MGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSALQDGETVLCCIAERAFMK 252
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 253 RLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSDSLKETMQTSVNYPHRNEDGPNDDVQH 312
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G + A + K++ +
Sbjct: 313 VGITAKNVPGQAQEAAENLGIELASLLLSKGAKHILSV 350
>gi|168057909|ref|XP_001780954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667588|gb|EDQ54214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 299
Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats.
Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 4/299 (1%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
SPLALA A++TR L H + II + T GD+I ++ L +IGGKGLFT+EI+
Sbjct: 1 SPLALAQAYQTRDKLKAAHPGLAEEGALEIIIIKTTGDKILSQPLADIGGKGLFTKEIDD 60
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130
L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L SV+G++
Sbjct: 61 ALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEGSVVGSA 120
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190
SLRR++ +L + V +FRG ++TRL KL+ A LLA AG+KRL + I IL
Sbjct: 121 SLRRQSQILHKYPHLKVENFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEHITAILA 180
Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+D P+ QGAI I + K +E + +NHE T +++CERAFLA+LDGSC++ IAG
Sbjct: 181 TDDMLPAIAQGAIGIACRTGDSKMEEYLASLNHEGTRLAISCERAFLAKLDGSCRTPIAG 240
Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISNKNVFNF 307
A F G+V +DGK E SR G + D I + +DA + + + F +
Sbjct: 241 LAERTEDGCSFRGLVATTDGKQVLETSRKGSFSYDDMIALAQDAGAELISRAGPDFFKW 299
>gi|313199811|ref|YP_004038469.1| porphobilinogen deaminase [Methylovorus sp. MP688]
gi|312439127|gb|ADQ83233.1| porphobilinogen deaminase [Methylovorus sp. MP688]
Length = 320
Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 154/302 (50%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF
Sbjct: 12 KLVIASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L
Sbjct: 70 VKELEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 130 SIVGTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC
Sbjct: 190 IAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A G + +G V + DGK GN +G+ AQ + +
Sbjct: 250 TVPLGAYATKLGENITIHGFVASVDGKQMLRAEATGNAAKPELLGQQLAQSLIARGADKI 309
Query: 305 FN 306
Sbjct: 310 LQ 311
>gi|325918388|ref|ZP_08180519.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937]
gi|325535411|gb|EGD07276.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937]
Length = 304
Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats.
Identities = 114/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDDPFVLPAILGRGDAADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ D+ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPDWLPAPAQGAVAVECRGDDARIHALLAVLDAPTTRVCVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G LY G+V ++ +G+ D +GR AQ + +
Sbjct: 241 HVPVAAFATWEGEGLYLQGMVGSASDGRLIHADAHGSAGDTEELGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|87117972|gb|ABD20293.1| HemC [Shigella boydii]
Length = 272
Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats.
Identities = 97/267 (36%), Positives = 145/267 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T GD I + L ++ GKGLF +E++ L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTPGDVILDTPLAKVCGKGLFVKELDVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +N+ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEVSLPAVGQGAVGIECRLNDTR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ L+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRALLAALNHNETALRVTAERAMNTRLEGGCQVPIGSYAELVDGEIWLLALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G+ DA + A+ +
Sbjct: 246 IRGERRGSPQDAEQMSVSLAEELLNNG 272
>gi|146329177|ref|YP_001209219.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A]
gi|158513296|sp|A5EW83|HEM3_DICNV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146232647|gb|ABQ13625.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A]
Length = 305
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 3/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL A L + P + ++P+ T+GD + + L++IGGK LF
Sbjct: 3 TLRIATRKSPLALWQAEHVAQQLKQHY--PELTVELVPIVTQGDILAHTPLSKIGGKNLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E + D AVHS KD+ L +G ++A LPRE+ D +S+ L +L
Sbjct: 61 IKELEIAMQQNAADIAVHSMKDVGVTLPEGFVLAAILPRENPFDALVSNHYAHLNELPNG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT SLRRK L +R D+ +ID RG + TRL KL++ A++LA AG+ RL++
Sbjct: 121 ARVGTCSLRRKMQLAHYRPDLKLIDIRGNVHTRLQKLDSGAFDALILACAGLIRLQQNAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I++IL E P+ GQGAI +E ++P ++ +NH +T V ER L G C
Sbjct: 181 IRQILPAEISLPAIGQGAIGVECRADSP-FLAHIQTLNHFETAVCVQTERVVNQRLQGDC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IA FA G T+ + DG+ DA G A+ + +++
Sbjct: 240 QVPIAVFATLSGKTMTLQSRIGTIDGQRMLAHQEICALEDAEKAGARCAEALIQQGAQDI 299
Query: 305 F 305
Sbjct: 300 L 300
>gi|170749246|ref|YP_001755506.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831]
gi|170655768|gb|ACB24823.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831]
Length = 307
Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats.
Identities = 122/291 (41%), Positives = 174/291 (59%), Gaps = 2/291 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RIGTR SP+ALA R ++ + P ++ ++T D+I +R L+EIGG
Sbjct: 1 MLNRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETELVVVTTVADKILDRPLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L +GE+D AVHS KD+ T L GL I+ L R+D RD F+S A L
Sbjct: 59 KGLFTKELEQALFAGEVDVAVHSMKDVETWLPDGLTIACILERDDPRDAFLSPHADGLAG 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA + +GTSSLRR A +L R D+ V+ RG TR+ KL + A LLA AG++RL
Sbjct: 119 LAAGARVGTSSLRRGAQVLMRRPDLRVVPLRGNANTRMRKLEAGECDATLLALAGLQRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + + +L++E+ P+ QGA+ IE ++ ++L+ I E T +V+ ERA LAEL
Sbjct: 179 LESMARSVLSVEEMLPAVAQGALGIECRADDAVIRDLLAPIACERTTVAVSAERALLAEL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
DGSC++ IA A G +L G++ DG SR G +A IGR+
Sbjct: 239 DGSCRTPIAALAQIDGDSLRIDGLLFLPDGSRHWAASRQGLVAEAERIGRE 289
>gi|258545718|ref|ZP_05705952.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826]
gi|258519035|gb|EEV87894.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826]
Length = 310
Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 162/301 (53%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A + L + P + ++P++T+GD+I + L IGGKGLF
Sbjct: 8 IRIATRESKLALWQAEHVAARLRAHY--PHLAVRLVPMTTRGDQILDAPLARIGGKGLFI 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ + GE D AVHS KD+ L +G +I+A LPRE+ D F+S+ SL +L +
Sbjct: 66 KELEQAMARGEADIAVHSMKDVGVHLPEGFRIAAILPRENPHDAFVSNHYASLAELPPGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT SLRR+ L R R D+ ++D RG ++TRL+KL+ AI+LA AG+ RL + I
Sbjct: 126 RVGTCSLRRRMQLARLRPDLKLLDLRGNVQTRLDKLDRGDFDAIVLACAGLIRLGLQARI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGAI IE H L+ ++ DT V+ ER L+GSC+
Sbjct: 186 RAELPPEQSLPAIGQGAIGIECHE-TSAVYPLLAALDDADTALCVHTERIINTHLEGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A A G ++ + DG + + + R DA +G A + +++
Sbjct: 245 VPLAAHAALHGERIHLAARIGMPDGSRYLSAADDAPRRDAEALGNHIAARLIADGARDIL 304
Query: 306 N 306
Sbjct: 305 Q 305
>gi|237752686|ref|ZP_04583166.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430]
gi|229376175|gb|EEO26266.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430]
Length = 310
Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats.
Identities = 105/309 (33%), Positives = 165/309 (53%), Gaps = 9/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K IGTR S LAL A ++ L + + P + + + TKGD+I + L +IGG
Sbjct: 1 MQK--LTIGTRGSVLALWQANHIKNLLEE--RYPKLEVELKIVKTKGDKILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E L+ G+ID AVHS KD+P + +GL ++A RED+RD F+S ++L D
Sbjct: 57 KGLFTKELEVLLLEGDIDLAVHSLKDVPVEFTQGLGLAAITKREDVRDSFLSFKYKNLGD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR + R D+ RG ++TRL +L N + AI+LA AG+ RL+
Sbjct: 117 LPKGAKVGTTSLRRVMQINALRGDLDCQSLRGNVQTRLQRLENEEFDAIILAQAGVNRLE 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + I ++ P+ GQ A+ IE ++ EL+ +N ++ +CERAF+ L
Sbjct: 177 LKGIPY-ITPLDFMVPAMGQAALGIECKKDSNYV-ELLSFLNDKNAVFETHCERAFVRVL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIR 297
+G C+ I A +L I+ DG + S + D IG+ A+
Sbjct: 235 NGGCQVPIGINARYNEGSLEVRAILGLPDGSEIIKENLESEVSSIKDCEYIGKTLAESFL 294
Query: 298 FISNKNVFN 306
+ +
Sbjct: 295 NQGAREILQ 303
>gi|218533190|ref|YP_002424006.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4]
gi|218525493|gb|ACK86078.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4]
Length = 309
Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats.
Identities = 122/304 (40%), Positives = 174/304 (57%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKG
Sbjct: 4 SRALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121
LFT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + L DL
Sbjct: 62 LFTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++RL
Sbjct: 122 PPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGM 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LAELD
Sbjct: 182 EDVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELD 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IA A KG + G++ DG EV R G DA IGRDA ++ +
Sbjct: 242 GSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWEVHREGLAADADAIGRDAGAELKRAAG 301
Query: 302 KNVF 305
F
Sbjct: 302 DVYF 305
>gi|289667461|ref|ZP_06488536.1| porphobilinogen deaminase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 304
Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D +GR AQ + +
Sbjct: 241 HVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|197121772|ref|YP_002133723.1| porphobilinogen deaminase [Anaeromyxobacter sp. K]
gi|220916566|ref|YP_002491870.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196171621|gb|ACG72594.1| porphobilinogen deaminase [Anaeromyxobacter sp. K]
gi|219954420|gb|ACL64804.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 314
Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 149/300 (49%), Gaps = 3/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P L GL ++A RED RD S ++L L +
Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLAAVPQREDPRDALCSPRWKTLAALPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEMVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E ++ + + DT + ER FLA ++G C+
Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLARLAALEDPDTRVRIEAERGFLARIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAG A G + +V + DG R G +A +G A + +
Sbjct: 239 VPIAGHATLAGGKVTIRALVASLDGARVIRGERTGAYAEARAMGESLADELLSRGADQIL 298
>gi|295095182|emb|CBK84272.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 273
Score = 344 bits (884), Expect = 7e-93, Method: Composition-based stats.
Identities = 100/263 (38%), Positives = 142/263 (53%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL L SV+GTSSLRR+ L R D+ + RG + TRL KL+
Sbjct: 61 REDPRDAFVSNRYDSLDALPAGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
N AI+LA AG+KRL E+ I+ L E P+ GQGA+ IE + + + Q L+ +N
Sbjct: 121 NGDYDAIILAVAGLKRLGLEERIRVALPPELSLPAVGQGAVGIECRLVDARTQALLAPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H+DT V ERA L+G C+ I +A L+ +V A DG R G
Sbjct: 181 HDDTAVRVKAERAMNTRLEGGCQVPIGSYAELTDGELWLRALVGAPDGSQMVRGERRGKP 240
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
DA +G A+ + + +
Sbjct: 241 QDAEALGVSLAEELLNNGAREIL 263
>gi|303257759|ref|ZP_07343771.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47]
gi|331001196|ref|ZP_08324823.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT
11859]
gi|302859729|gb|EFL82808.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47]
gi|329569128|gb|EGG50920.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT
11859]
Length = 310
Score = 344 bits (884), Expect = 7e-93, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ I TR SPLAL A +S L + K P ++ ++ L+TKGD+I + TL++IGGK
Sbjct: 3 QQDHLVIATRESPLALWQAKYVQSCLKE--KFPELDVQLLGLTTKGDKILDVTLSKIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G+ AVHS KD+P LL+ ++A + RED RD +SH SL+++
Sbjct: 61 GLFVKELEAAMLEGKAQIAVHSLKDVPMDLLEPFTLAAVMVREDPRDAVVSHKYASLEEM 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR+ ++ + V RG + TRL+KL+N + +++A AG+KRL
Sbjct: 121 PAGSVVGTSSLRRELMVRSRFPHLKVEMIRGNVGTRLSKLDNGQYDTLVMAVAGLKRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I+ I+ E P+PGQGAI IE N+ Q+ V+ +N EDT ERA L
Sbjct: 181 SDRIRSIIPPEVSLPAPGQGAIGIEAVGNDEMTQKYVEALNDEDTRLCTQAERAVSRALG 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ +A +A ++ +V + G + R +
Sbjct: 241 GSCQVPLAAYATIDDGQMFLRALVGNHMTGEYVTAEYTGLANEPEENARKVLDQLIEKGA 300
Query: 302 KNVF 305
K +
Sbjct: 301 KRLL 304
>gi|154148130|ref|YP_001406461.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381]
gi|166201500|sp|A7I1S0|HEM3_CAMHC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|153804139|gb|ABS51146.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381]
Length = 308
Score = 344 bits (884), Expect = 7e-93, Method: Composition-based stats.
Identities = 114/307 (37%), Positives = 166/307 (54%), Gaps = 8/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR S LAL + ++ + + + + TKGD I + L +IGG
Sbjct: 1 MNK--LRIATRGSALALWQSKYIQNLIE---NNTEVEVELQSMKTKGDVILDTPLAKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ ++ GE D AVHS KD+P KGL ++A RED+RD F+S S +
Sbjct: 56 KGLFTKELEESMLRGESDLAVHSLKDVPVVFPKGLILTAISEREDVRDSFVSEKFASFNE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRRK LL R D+ +I RG I TRL KL N+ AI+LA AG+KRL
Sbjct: 116 LPKGAKVGTTSLRRKMQLLIKRPDLKIISLRGNINTRLRKLKENEFDAIILASAGLKRLN 175
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ IK + +++ P+ GQGA+ IE V+ + E++K IN+E++ + ER F+A
Sbjct: 176 LMENIKYFVPFSLDEMIPAMGQGALGIEC-VDKSEVIEILKFINNENSVIATTIERDFVA 234
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ I A G + IV DG F + R ++ D N G A
Sbjct: 235 KLNGGCQVPIGVNAEISGDIIKVRAIVGLPDGSEFIKDKREISKADFKNFGTKLADEFIS 294
Query: 299 ISNKNVF 305
+
Sbjct: 295 RGAIELL 301
>gi|170738754|ref|YP_001767409.1| porphobilinogen deaminase [Methylobacterium sp. 4-46]
gi|168193028|gb|ACA14975.1| porphobilinogen deaminase [Methylobacterium sp. 4-46]
Length = 311
Score = 344 bits (884), Expect = 8e-93, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M +P RIGTR SP+ALA R + H P + ++ ++T DRI +R L+ I
Sbjct: 1 MAHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADRILDRPLSAI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I+ L R+D RD F+S + SL
Sbjct: 61 GGKGLFTKELEQALFAGEIDVAVHSMKDVETWLPDGLVIACILERDDPRDAFLSLASGSL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L + +GTSSLRR A +L R D+ ++ RG TR+ KL A LLA AG++R
Sbjct: 121 AELPAGARVGTSSLRRGAQVLMRRPDLRIVPLRGNANTRIRKLEEGVCDATLLAIAGLER 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + + ++ +E+ P+ QGA+ IE + L++ + T ++ ER LA
Sbjct: 181 LGLAHLARTVIPVEEMLPAVAQGALGIECRAADEDVIALLQAVACPRTTTALAAERGLLA 240
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IA A G L G++ DG +R+G +A +IGR+A ++
Sbjct: 241 ELDGSCRTPIAALAQIDGDRLTLDGLLFLPDGSAHWATTRSGPAAEAASIGREAGADLKA 300
Query: 299 ISNK 302
+ +
Sbjct: 301 QAGE 304
>gi|118594154|ref|ZP_01551501.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181]
gi|118439932|gb|EAV46559.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181]
Length = 305
Score = 344 bits (884), Expect = 8e-93, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 160/302 (52%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R SPLA+ A ++ L +++ P +I I T+GD I +++L IGGKGL
Sbjct: 3 KKITIASRESPLAMWQAEHIKTQLNNLY--PYLSIYIKGFKTQGDIILDQSLATIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L+ E D AVHS KD+P + + Q+SA RED RD FIS +SL D+
Sbjct: 61 FIKELEQALLKKEADLAVHSMKDLPMDIYEDFQLSAITAREDPRDAFISLKYKSLDDMPD 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR++ + + + RG ++TRL+KL + AI+LA AG+ RL +
Sbjct: 121 GAIVGTSSLRRQSQIKAKYPSLIIEPLRGNLQTRLSKLKKGQYGAIILAAAGLIRLDLQD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++ P+ GQGA+ IE +N + L+K +N +DT V ER L GS
Sbjct: 181 QITMYIDKNVSIPAVGQGALGIEILSSNTELDLLLKPLNDDDTSRCVLAERMVSRSLAGS 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + A+ + + G V + +G+ G + D +G +Q + K
Sbjct: 241 CTVPLGAHAFINKNAMVINGFVASPNGEKIIHAEMKGVKADFYKLGESLSQLLIDQGAKT 300
Query: 304 VF 305
+
Sbjct: 301 LL 302
>gi|54020779|ref|NP_001005635.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis]
gi|49250823|gb|AAH74624.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis]
Length = 351
Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats.
Identities = 104/337 (30%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+GTR S LA L + P + I+ +ST GD+I + L++IG K
Sbjct: 7 NKHVIRVGTRKSQLARIQTDSVVEMLSK--RFPSTHFDIVAMSTTGDKILDTALSKIGEK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +L
Sbjct: 65 SLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRYGNTL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177
L SVIGTSSLRR A L + + D RG + TR+ KL+ + AI+LA AG++
Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAAAGLR 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + I +IL ++ + GQGA+ IE + +V + +T ERAF+
Sbjct: 185 RMGWKNRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAERAFM 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNRCD-- 284
L+G C +A K S LY G V + DG + G D
Sbjct: 245 KRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPNDDVQ 304
Query: 285 ----------------AINIGRDAAQYIRFISNKNVF 305
A +G A + K +
Sbjct: 305 HVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 341
>gi|325927040|ref|ZP_08188311.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118]
gi|325542591|gb|EGD14062.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118]
Length = 304
Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D +GR AQ + +
Sbjct: 241 HVPVAAFARWEGQGLFLQGMVGSASDGRLIHADAHGSAEDTEALGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|126326558|ref|XP_001370512.1| PREDICTED: similar to Porphobilinogen deaminase
(Hydroxymethylbilane synthase) (HMBS)
(Pre-uroporphyrinogen synthase) (PBG-D) [Monodelphis
domestica]
Length = 344
Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats.
Identities = 109/337 (32%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L D++ P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVAMLKDIY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120
FT+E+E L E+D VHS KD+PT L I A RE D I H T Q+L
Sbjct: 60 FTKELEYALEKNEVDLVVHSLKDLPTVLPPAFTIGAVCKRESPYDAVIFHPKYTGQTLGT 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SVIGTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPERSVIGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILAAAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + ++L E+ + GQGA+ +E + + +LV+V++ +T ERAFL
Sbjct: 180 GWQSRVGQLLYPEECLYAVGQGALGVEVRAKDQEVLDLVQVLHDPETLLRCIAERAFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVDTTLKDGQLYLTGGVWSLDGSDSLKETMQTTINDSAQHEDGPEDDVQRV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + +N+ +
Sbjct: 300 GITAQHISQGVQRAAENLGISLANLLLNKGARNILDV 336
>gi|85858418|ref|YP_460620.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB]
gi|123738772|sp|Q2LQU2|HEM3_SYNAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85721509|gb|ABC76452.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB]
Length = 306
Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL + + L + P ++ I+ + T GD + L +IGGKGLF
Sbjct: 1 MKIGTRGSALALTQTRQIAARLQ--GQYPEMHLEIVVIKTSGDIQKDVPLAKIGGKGLFI 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G +D AVHS KD+P +L +GLQI+A RED RDV IS + +L +
Sbjct: 59 KEIEEALLAGTVDLAVHSMKDLPAELPEGLQIAAVPRREDPRDVLISGICREFDNLPAGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT SLRR L WR D+ ++ RG ++TR+ K+ +++A AGI+R+ + +
Sbjct: 119 RIGTGSLRRSVQLRDWRPDLEIVPLRGNLDTRIRKVAQAALDGVVVAAAGIRRMGWAEKV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQG +C+ET + + + + + T V ERAFL L G C
Sbjct: 179 TQFIPTEKMLPAVGQGVLCLETREEDEDLKAGLAFLEDKRTRREVTAERAFLRRLGGGCT 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A FA +G L G+V + + + G+ A+++G + A+ + + +
Sbjct: 239 LPVAAFAEQRGDVLTIRGMVGSLNERTMIRQEIYGSVEQAVDLGTELAERLLDGGGRILL 298
Query: 306 N 306
Sbjct: 299 E 299
>gi|323136449|ref|ZP_08071531.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242]
gi|322398523|gb|EFY01043.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242]
Length = 308
Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats.
Identities = 133/296 (44%), Positives = 178/296 (60%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR SPLALA R++L H + + I + T GD+I +R L+E GG
Sbjct: 1 MTVRSLRIGTRGSPLALAQTHMIRAALAQAHGVAEDHFAIEIIKTTGDQIQDRPLSESGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E++ LI+G+ID AVHS+KD+PT L + I+ YLPRED RD +I +L
Sbjct: 61 KGLFTKELDSALIAGDIDLAVHSSKDLPTHLPAEIVIAGYLPREDARDAWIGRNGVTLDQ 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR A + R R D+ RG + TRLNK+ + A LLA AG+KRL
Sbjct: 121 LPAGAVVGTASLRRAAQVKRLRPDVQTTLLRGNVHTRLNKVERGEIDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+L ++DFPP+ GQGAI I + N+P+ + + + E T ++ ERAFLA L
Sbjct: 181 LADRATALLPLDDFPPAVGQGAIGITSRANDPETRAALAPLLDEATALALLAERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
DGSC++ IAG A K L FYG VL +DG V R+G DA IG DA I
Sbjct: 241 DGSCRTPIAGHATVKDGDLTFYGEVLKADGSEVWIVRRHGRAIDAAMIGADAGNEI 296
>gi|212275007|ref|NP_001130048.1| hypothetical protein LOC100191140 [Zea mays]
gi|194688160|gb|ACF78164.1| unknown [Zea mays]
Length = 394
Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats.
Identities = 131/299 (43%), Positives = 180/299 (60%), Gaps = 5/299 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299
C++ IA +AY F G++ + DG E +R+G D + +G+DA +R
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELRRR 346
>gi|66809519|ref|XP_638482.1| porphobilinogen deaminase [Dictyostelium discoideum AX4]
gi|74854142|sp|Q54P93|HEM3_DICDI RecName: Full=Porphobilinogen deaminase; AltName: Full=Heme
biosynthesis protein C; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS
gi|60467077|gb|EAL65118.1| porphobilinogen deaminase [Dictyostelium discoideum AX4]
Length = 325
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 96/316 (30%), Positives = 157/316 (49%), Gaps = 14/316 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ IG+R S LA+ R + +++ P + I + T GD++ + +L++IG K
Sbjct: 6 KRDKVIIGSRKSQLAMLQTEWVRDRIQELN--PGIIVEIKTMDTTGDKVLDVSLSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-----TAQ 116
GLFT+E+E +++G ID AVHS KD+PTKL GL++ A R + D FI++
Sbjct: 64 GLFTKELEDMMLNGTIDLAVHSLKDIPTKLPDGLKLGAITKRYNTSDAFIANAKKHGKNC 123
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174
L +L ++IG+SSLRR A L + + D RG + TR KL + N ++LA A
Sbjct: 124 KLSELPQGAMIGSSSLRRVAQLKKAYPHLQFKDIRGNLNTRFKKLEDDSNGYDGMILAVA 183
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++R++ I EI+ + GQG++ IE + Q ++ + H ++ ER
Sbjct: 184 GLERMELTDHISEIIPDSISLYAVGQGSLGIECKDGDDFIQSILNPLIHRESMYCCEAER 243
Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ L +L+G C I TL IVL DG + E G +G
Sbjct: 244 SMLRDLEGGCHVPIGVVTKLHNQSQPDETLEINAIVLNLDGSKYIESKIIGPSIQYYQLG 303
Query: 290 RDAAQYIRFISNKNVF 305
+ AQ + +K++
Sbjct: 304 KSIAQDLINKGSKDIL 319
>gi|254283408|ref|ZP_04958376.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B]
gi|219679611|gb|EED35960.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B]
Length = 303
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 9/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I TR SPLAL A L ++H P + ++ ++++GD++ +R L ++GG
Sbjct: 1 MSK--IVIATRESPLALWQANHVADRLSELH--PELEVELLGMTSRGDQLLDRPLYKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L G D AVHS KD+P L GL + RED D + +
Sbjct: 57 KGLFVKELETALQDGSADIAVHSMKDVPMALPPGLTLGVICEREDPTDSLVGVSG--FDQ 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + LLR R D+ + RG + TRL KL+ + +AI+LA AG+KRL
Sbjct: 115 LPQGARVGTSSLRRGSQLLRHRPDLEIGFLRGNVNTRLAKLDAGEFNAIILASAGLKRLG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++ + P+ GQGA+ IE + + EL+K ++H T V ERA + L
Sbjct: 175 FEDRIGQLIDPDLSLPAGGQGAVGIEYRDGDDRIAELLKPLHHVQTAACVLAERALVRRL 234
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C IA FA G L+ G V +++GK G D +G D A +
Sbjct: 235 DGGCDVPIASFALPDGDGGLWLRGRVGSTEGKTLLLAEGRG--RDPEVLGYDVADQLLQA 292
Query: 300 SNKNVF 305
+
Sbjct: 293 GAAELL 298
>gi|289664026|ref|ZP_06485607.1| porphobilinogen deaminase [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 304
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 112/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D +GR AQ + +
Sbjct: 241 HVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|66773161|ref|NP_001019559.1| hydroxymethylbilane synthase, b [Danio rerio]
gi|63101908|gb|AAH95373.1| Hydroxymethylbilane synthase, b [Danio rerio]
Length = 360
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 114/338 (33%), Positives = 158/338 (46%), Gaps = 37/338 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA L +++ P I+ +ST GD+I + L++IG K
Sbjct: 15 SRVIRVGTRKSQLARIQTDSVVEKLKELY--PDVLFEIVAMSTTGDKILDTALSKIGEKS 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L
Sbjct: 73 LFTKELENALEKNEVDLVVHSLKDLPTVLPAGFTIGAVLKRENPHDAVVLHPKNKGKRLD 132
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L+ SVIGTSSLRR A L + + D RG + TRL KL+ NN AI+LA AG+KR
Sbjct: 133 SLSNKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDENNDFSAIILAAAGLKR 192
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E I +IL ED + GQGA+ +E + E+V V+N DT S ERAFL
Sbjct: 193 MGWENRISQILGPEDCMYAVGQGALAVEVRARDLDILEMVSVLNDSDTALSCIAERAFLK 252
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS--------------------- 277
L+G C +A + K S LY G V + DG + +
Sbjct: 253 HLEGGCSVPVAVHSEVKNSQLYLTGAVYSLDGSDSLKETMQTSFNPDTQAEEQEKVDEKV 312
Query: 278 ----------RNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A+ +G D + K +
Sbjct: 313 QRVGITALKVAEAAQDAAMKLGVDLGNLLLSKGAKEIL 350
>gi|330684284|gb|EGG96022.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU121]
Length = 298
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 168/300 (56%), Gaps = 6/300 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKQVR--PELDIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L
Sbjct: 60 FVKEIQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + +L++ ++++D V ER FLAE+DG
Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDKELLDLLQEVHNKDVEKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A + F G+++ DG +E + G +G++ ++ ++
Sbjct: 240 SCQVPIGGYATINSQQQIEFTGLIMTPDGTERYEHTAIG--ESPTELGKEVSRVLKEQGA 297
>gi|92116183|ref|YP_575912.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14]
gi|123387219|sp|Q1QQP5|HEM3_NITHX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91799077|gb|ABE61452.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14]
Length = 316
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 137/299 (45%), Positives = 190/299 (63%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR S LALA A E R L H++ P IVI + T GD I +R L ++GGKGLFT+
Sbjct: 12 TIGTRGSALALAQANEVRDRLARAHQVAPERIVIKTIRTSGDAIQDRPLFDVGGKGLFTK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RD FIS A SL DL S+
Sbjct: 72 EIEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSI 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT+SLRR+A++LR R D+ V RG +ETRL KL +A A LLA AG+ RL +
Sbjct: 132 VGTASLRRQAMVLRLRPDLKVSVIRGNVETRLRKLVAGEADATLLALAGLNRLGLQDRAT 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 192 RILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRT 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I G G ++F G++++ DG +E +R G R DA +G DAA+ +R + + F
Sbjct: 252 PIGGHCRVNGDRIHFRGLIISPDGTQSYETTREGARADAAALGADAARELRERAGEKFF 310
>gi|288957245|ref|YP_003447586.1| hydroxymethylbilane synthase [Azospirillum sp. B510]
gi|288909553|dbj|BAI71042.1| hydroxymethylbilane synthase [Azospirillum sp. B510]
Length = 312
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 134/307 (43%), Positives = 175/307 (57%), Gaps = 2/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M P RIGTR SPLALA A ETR L+ H P I I+ T GDRI +RTL E
Sbjct: 1 MTTHPLRIGTRGSPLALAQAHETRDRLIAAHPHLAAPGAIEIVVFKTTGDRILDRTLAEA 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L G D AVHS KD+PT+L GL+I+ LPRED RD F S + L
Sbjct: 61 GGKGLFTKELEEALFDGRADLAVHSMKDVPTQLPDGLEIATLLPREDPRDAFFSRSGGGL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL +V+GT+ LRR+A +L R D+ + RG ++TRL+KL+ + A LLA AG++R
Sbjct: 121 ADLPAGAVVGTAGLRRQAQVLELRPDLRIFPLRGNVQTRLSKLDAGEVDATLLALAGLRR 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +L E P+ QGAI IE + + L+ +N +T V ERA LA
Sbjct: 181 LGLTGRISAVLEPETMLPAVAQGAIGIEIRSADDATRALLAPLNCAETMVRVTAERALLA 240
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDGSC++ IA A G L+ VL+ DG+ R G +A ++G DA IR
Sbjct: 241 ALDGSCRTPIAALALLDGDALHLRAKVLSCDGRSIFRAERRGKAANAESLGADAGAEIRA 300
Query: 299 ISNKNVF 305
+ F
Sbjct: 301 QLPPDFF 307
>gi|84625435|ref|YP_452807.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575118|ref|YP_001912047.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|123752694|sp|Q2NYU4|HEM3_XANOM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059004|sp|B2SMV3|HEM3_XANOP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|84369375|dbj|BAE70533.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519570|gb|ACD57515.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 304
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 168/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL ++
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDER 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A A +G L+ G+V ++ +G+ D ++GR AQ + +
Sbjct: 241 HVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|70726258|ref|YP_253172.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435]
gi|123748643|sp|Q4L709|HEM3_STAHJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|68446982|dbj|BAE04566.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435]
Length = 310
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 169/304 (55%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P I I + TKGDRI N+ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAV--DPTLEIEIKEIVTKGDRIVNKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+++L EID A+HS KD+P+ + +GL + RE D +IS L +L
Sbjct: 60 FVKEIQQELFDKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHIPLNELPD 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLKKLEIEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + EL+ ++++ + V ER FL+ +DG
Sbjct: 180 DIVTTYLDKDILLPAIGQGALGIECRSDDVELLELLSKVHNQAVANCVTAERTFLSAMDG 239
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A + + F G+++ DG +E + G + +++G ++ ++
Sbjct: 240 SCQVPIGGYATNKENGEIEFTGLIMTPDGTKRYEHTEVGK--NPVDLGEAVSRVLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|224419071|ref|ZP_03657077.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|253828009|ref|ZP_04870894.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|313142581|ref|ZP_07804774.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|253511415|gb|EES90074.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|313131612|gb|EFR49229.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
Length = 314
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 105/309 (33%), Positives = 162/309 (52%), Gaps = 8/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K IGTR S LAL A + SL + P + + + TKGD+I + L +IGG
Sbjct: 1 MQK--IIIGTRGSVLALWQANFVKDSLEK--QYPNLQVELKIVKTKGDKILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ ++ GEID AVHS KD+P + ++GL ++A RED+RD F+S ++L++
Sbjct: 57 KGLFTKELEELMLKGEIDVAVHSLKDVPVEFVEGLGLAAITKREDVRDSFLSFKYKNLQE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR + R D+ + RG ++TRL +L AI+LA AG+ RL
Sbjct: 117 LPQGAKVGTTSLRRVMQINTLRKDLDCMSLRGNVQTRLKRLKEGDFDAIILAQAGVNRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + I ++ P+ GQ A+ IE V + + +L++ +N + ER F+ L
Sbjct: 177 IEGEVDCIAPLDFMIPAMGQAALGIECRV-DSEVAKLLEFLNDTKASFETSAEREFVKTL 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIR 297
+G C+ I A + L I+ DG +V + D GRD A
Sbjct: 236 EGGCQVPIGINATLEKDNLTIRAILGIPDGSRILKDAKVCAVSSLEDCKKAGRDFALEFI 295
Query: 298 FISNKNVFN 306
K +
Sbjct: 296 KKGAKEILQ 304
>gi|209147746|gb|ACI32904.1| Porphobilinogen deaminase [Salmo salar]
Length = 359
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 107/285 (37%), Positives = 147/285 (51%), Gaps = 6/285 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LA L ++ P +I I+ ++T GD+I + L++IG K
Sbjct: 16 SRVIRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGMTTTGDKILDTALSKIGEKS 73
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +SL
Sbjct: 74 LFTKELETALERNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPQNMGKSLD 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
L SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++R
Sbjct: 134 TLPDKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKGDFSAIILAAAGLRR 193
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + +IL ED + GQGAI IE + E+V V++ +T ERAFL
Sbjct: 194 MGWESRVSQILGPEDCMYAVGQGAIAIEVRAKDKDILEMVSVLHDPNTVLRCIAERAFLR 253
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
L+G C +A K S LY G V + DG + + +
Sbjct: 254 RLEGGCSVPVAVHTEVKDSQLYLTGAVYSLDGSDSLKETMQTSIA 298
>gi|78046235|ref|YP_362410.1| porphobilinogen deaminase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|123771497|sp|Q3BXV3|HEM3_XANC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78034665|emb|CAJ22310.1| hydroxymethylbilane synthase HemC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 304
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEMLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIYSLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D +GR AQ + +
Sbjct: 241 HVPVAAFARWEGQGLFLQGMVGSASDGRLIHADAHGSAEDTEALGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|163856376|ref|YP_001630674.1| porphobilinogen deaminase [Bordetella petrii DSM 12804]
gi|229836105|sp|A9IKF3|HEM3_BORPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|163260104|emb|CAP42405.1| hemC [Bordetella petrii]
Length = 313
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 163/300 (54%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF
Sbjct: 7 LVIATRASRLALWQAEHVRDRLRALY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ +L DL +
Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLQAPFELCAILERADPRDAFVSNQYTTLADLPAGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ + + +SV RG ++TRL+KL+ AI+LA AG++RL + I
Sbjct: 125 VVGTSSLRRESQIRQRYPHLSVKPLRGNLDTRLSKLDRGDYAAIVLAAAGLQRLGMGERI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L ED P+ GQGA+ IE + +E + + T V ERA L GSC+
Sbjct: 185 RSLLEPEDSLPAAGQGALGIEIRNDRNDLREWLAPLACSRTTACVVAERAVSRALGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A G++L +V + DG G A IG+ AAQ + +
Sbjct: 245 VPLAAYAELNGNSLALRALVASPDGTRVIRSQHAGPAEQAQAIGQAAAQELLSNGADAIL 304
>gi|166710503|ref|ZP_02241710.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 304
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 168/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAVLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D ++GR AQ + +
Sbjct: 241 HVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|298707417|emb|CBJ30046.1| hydroxymethylbilane synthase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 373
Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats.
Identities = 127/299 (42%), Positives = 188/299 (62%), Gaps = 2/299 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
IGTR SPLALA A+ETR L + + I + T GD I ++ LTEIGGKGL
Sbjct: 59 LTIGTRGSPLALAQAYETRKRLGEQFDELKEEGAVAIQVIKTSGDMILDKPLTEIGGKGL 118
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E++ +L++ ++D VHS KD+PT ++ G + LPRED D FIS+ A ++ L
Sbjct: 119 FTKELDVQLLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPD 178
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SVIG++SLRR+A LLR V++FRG ++TRL KL+ A LLA+AG+KRL+ +
Sbjct: 179 GSVIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQ 238
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V +L+ + P+ QGAI I+ N+P ++ + + H++T +V+CERAFLA LDG+
Sbjct: 239 VATSVLDQDAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGN 298
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
CK+ IAG A +G L F G++ + DGK F++ +R G DA+ +G DA ++ +
Sbjct: 299 CKTPIAGQARMEGEKLVFRGLIASPDGKQFYDTTREGKPEDAVAMGHDAGMELKKRAGP 357
>gi|242060650|ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
gi|241931445|gb|EES04590.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
Length = 340
Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats.
Identities = 122/299 (40%), Positives = 176/299 (58%), Gaps = 5/299 (1%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI+
Sbjct: 41 SDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEIDD 100
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130
++ G ID AVHS KD+PT L +G + LPRED RD FI TA SL +L V+G++
Sbjct: 101 AILQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDARDAFICLTANSLAELPSGCVVGSA 160
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190
SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + IL+
Sbjct: 161 SLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSILS 220
Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ IA
Sbjct: 221 MEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPIAA 280
Query: 251 FAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVFN 306
+A+ + F G++ + DG +E +R G D + +G+DA ++ + ++
Sbjct: 281 YAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 339
>gi|75674669|ref|YP_317090.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255]
gi|123745784|sp|Q3SVF3|HEM3_NITWN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|74419539|gb|ABA03738.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255]
Length = 316
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 136/299 (45%), Positives = 190/299 (63%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+
Sbjct: 12 TIGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL +
Sbjct: 72 EIEEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGAT 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT+SLRR+A++L+ R D+ V RG +ETRL K++ +A A LLA AG+ RL +
Sbjct: 132 VGTASLRRQAMVLKLRPDLKVNSLRGNVETRLRKISVGEADATLLALAGLNRLGLQDKAT 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 192 RILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDPETEVALSAERSFLALLDGSCRT 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I G G + F G++++ DG F+E +R G R DA +G DAA +R + + F
Sbjct: 252 PIGGHCRVNGDRIDFRGLIISPDGTEFYETTREGARADAAALGADAAHELRERAGEKFF 310
>gi|148222555|ref|NP_001089699.1| hydroxymethylbilane synthase [Xenopus laevis]
gi|76780331|gb|AAI06358.1| MGC130905 protein [Xenopus laevis]
Length = 351
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 104/337 (30%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+GTR S LA L + + I+ +ST GD+I + L++IG K
Sbjct: 7 TKHVIRVGTRKSQLARIQTDSVVEMLSK--RFSSTHFEIVAMSTTGDKILDTALSKIGEK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +L
Sbjct: 65 SLFTKELENALEKNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRFGNTL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177
L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++
Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLRKLDEQEDFSAIILAAAGLR 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I +IL ++ + GQGA+ +E + +V + +T ERAF+
Sbjct: 185 RMGWENRIGQILTSDECLYAVGQGALAVEVRAKDQDILSMVSALQDPETVLRCVAERAFM 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNRCD-- 284
+L+G C +A K S LY G V + DG + G D
Sbjct: 245 KKLEGGCSVPVAVSTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPNDDVQ 304
Query: 285 ----------------AINIGRDAAQYIRFISNKNVF 305
A +G A + K +
Sbjct: 305 HVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 341
>gi|194290490|ref|YP_002006397.1| porphobilinogen deaminase [Cupriavidus taiwanensis LMG 19424]
gi|193224325|emb|CAQ70336.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Cupriavidus taiwanensis LMG 19424]
Length = 336
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 19 QKLVIASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + G D AVHS KD+P +L G ++A + RED RD +S SL ++
Sbjct: 77 FVKELEFAMDEGRADLAVHSLKDVPMELPPGFTLAAVMEREDPRDALVSSAYASLDEMPP 136
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 137 GTVVGTSSLRREAALRSRYPHLVVKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGD 196
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ ++ +E P+ GQGA+ IET P+ E + +NH+ T +V ERA L GS
Sbjct: 197 RIRALIPLEASLPAAGQGALGIETLSTRPELAEWLAPLNHQPTALAVTAERAVSRRLGGS 256
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKI---FHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ +A A G L V DG + A +G+ A +
Sbjct: 257 CQVPLAAHARWDGDQLRLEAFVALPDGSRAIRAAAAGPAADLAAAEALGQACAGDLLAQG 316
Query: 301 NKNVF 305
+++
Sbjct: 317 AESIL 321
>gi|188584576|ref|YP_001928021.1| porphobilinogen deaminase [Methylobacterium populi BJ001]
gi|179348074|gb|ACB83486.1| porphobilinogen deaminase [Methylobacterium populi BJ001]
Length = 309
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 121/304 (39%), Positives = 171/304 (56%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKG
Sbjct: 4 SRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDL 121
LFT+E+E+ L + ID AVHS KD+ T L GL I+ L R+D RD F+S TA L DL
Sbjct: 62 LFTKELEQALFADTIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSAGTANGLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR A +L R D+ ++ RG TR+ KL + A LLA AG++RL
Sbjct: 122 PSGARVGTSSLRRGAQVLMHRPDLMIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGM 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E V + +L +E+ P+ QGA+ IE + + L+ + T +++ ER LAELD
Sbjct: 182 EDVARSVLPVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELD 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IA A G + G++ DG V R G +A IGRDA ++ +
Sbjct: 242 GSCRTPIAALAQVNGDRIALDGLLFLPDGSRHWAVHREGPAAEADAIGRDAGAELKRSAG 301
Query: 302 KNVF 305
F
Sbjct: 302 DVYF 305
>gi|56856|emb|CAA29984.1| unnamed protein product [Rattus norvegicus]
Length = 344
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 104/337 (30%), Positives = 155/337 (45%), Gaps = 35/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + ++L+
Sbjct: 60 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFEGKFIGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ER FL
Sbjct: 180 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERDFLRH 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 240 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 299
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 300 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 336
>gi|164687765|ref|ZP_02211793.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM
16795]
gi|164603539|gb|EDQ97004.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM
16795]
Length = 298
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 100/295 (33%), Positives = 153/295 (51%), Gaps = 3/295 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LAL L + P + + TKGD I + L +IG KGLF
Sbjct: 2 KLVVGTRGSNLALVQTNWVVDQLKK--ENPGVEFEVKIIKTKGDLIKDLPLDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLAL 123
+EIEK L+ GEID AVHS KDMP+ L +GL+ + RED RD I +SL DL
Sbjct: 60 VKEIEKSLLDGEIDMAVHSMKDMPSYLPEGLKFAHSPKREDPRDALIFKEGYKSLDDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT S RRK LL+ R D+ ++ RG IETR+ K+ K ++LA +G++R +
Sbjct: 120 GARIGTGSKRRKYQLLKHRPDLEIVPIRGNIETRIKKIETEKLDGVVLAASGLRRAGLDD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + P+P QG + +E ++ + ++++ I + T ++ ER FL ++GS
Sbjct: 180 KIDYYIPTDIMLPAPAQGILALEIREDDKETEKIIDSIKDDITKIQIDAERGFLIGVNGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + + +G + G+ +GK S+ G DA IG + A+ +
Sbjct: 240 CHIPMGAYCEIEGEKITLTGLYGDGEGKKIVVQSQVGTLADAPKIGYELAKSVLK 294
>gi|119897284|ref|YP_932497.1| porphobilinogen deaminase [Azoarcus sp. BH72]
gi|119669697|emb|CAL93610.1| hydroxymethylbilane synthase [Azoarcus sp. BH72]
Length = 316
Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 156/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF
Sbjct: 15 IVIATRESRLALWQAEHVKARLEALY--PACTVELLGMTTRGDQILDRPLAKVGGKGLFV 72
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P ++ K + RE D F+S+ SL D+ +
Sbjct: 73 KELETALLDGRADIAVHSMKDVPMEMGKAFALPCISAREVPLDAFVSNRYASLADMPPGT 132
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG+ RL I
Sbjct: 133 VVGTSSLRRESQLHAQYPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLADRI 192
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE + P+ + +N T V ERA L GSC+
Sbjct: 193 RATLPAEVSLPAAGQGALGIECLSSRPEVAAWLAPLNDPATSACVRAERAVARALAGSCE 252
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A +G+ L+ G V DG R G+ A +G A +R + +
Sbjct: 253 VPLGAYAELRGARLWLRGFVARPDGSEIVRAEREGDPAAAEALGGALADDLRAQGAERIL 312
>gi|228475193|ref|ZP_04059919.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119]
gi|228270804|gb|EEK12206.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119]
Length = 310
Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSKQFIDKLKAI--DPSLEIEIKEIVTKGDRIVNQQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L
Sbjct: 60 FVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ +
Sbjct: 120 NSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +DG
Sbjct: 180 DVVTTYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLASMDG 239
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A Y + + F G+++ DGK +E + G D + +G ++ ++
Sbjct: 240 SCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGT--DPVKLGNRVSEILKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|188990080|ref|YP_001902090.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. B100]
gi|229846307|sp|B0RNI9|HEM3_XANCB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167731840|emb|CAP50024.1| hydroxymethylbilane synthase [Xanthomonas campestris pv.
campestris]
Length = 304
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L GSC
Sbjct: 181 ITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ ++GR A + +
Sbjct: 241 HVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRRVADGLFEKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|73662403|ref|YP_301184.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123761533|sp|Q49YA2|HEM3_STAS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72494918|dbj|BAE18239.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 308
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 100/304 (32%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L + P I I + TKGD I ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSRQFIDKLKAI--DPSLEIEIKEIVTKGDLIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + ID A+HS KD+P+ + GL + RE+ D +I+ L +L
Sbjct: 60 FVKEIQNELFNHGIDMAIHSLKDVPSVIPDGLTLGCIPDRENPYDAYIAKNHVPLNELPD 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ +
Sbjct: 120 NSIVGTSSLRRGAQILAKYPKLQIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ E P+ GQGA+ IE ++ L+ ++++D D V ER FL ++G
Sbjct: 180 DIVTSYLDKETLIPAIGQGALGIECRSDDETLLSLLSKVHNQDVADCVTAERTFLTRMNG 239
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A + T+ F G++++ DGK ++ + G D + +G + + +
Sbjct: 240 SCQVPIGGYATKEADGTIEFTGLIMSPDGKERYQHTVRGT--DPVALGEEVTKVLNEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|329119508|ref|ZP_08248193.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464441|gb|EGF10741.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 317
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 165/302 (54%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P +I I+ L+T+GD+I +RTL++IGGKGLF
Sbjct: 6 KLTIASRQSALAMWQAEHIKARLHALY--PACDIRILGLTTRGDQILDRTLSKIGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ +L L
Sbjct: 64 IKELEQALHDGRADLAVHSIKDVPMELPEGFLLAAIGERASPFDAFVSNRHNTLAALPAG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A + ++V RG ++TRL KL+N + AI+LA AG++RL
Sbjct: 124 AVVGTSSLRREAQIRARHPHLTVKPLRGNVQTRLAKLDNGEYDAIILAAAGLQRLGLNGR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+EIL+ ++ P+ GQGA+ IE + L+ +NH +T V ER L GSC
Sbjct: 184 IREILSPDECLPAAGQGALGIEIAEHRSDLLPLLAPLNHAETAACVTAERTLAQALGGSC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + L G+V DG + E + A +GR A+ + + +
Sbjct: 244 QIPLAAYCTSDEGLLTLRGLVGHPDGSVLIEAAAQAPAAYARTLGRAVAKRLADQDAEAL 303
Query: 305 FN 306
+
Sbjct: 304 ID 305
>gi|295695321|ref|YP_003588559.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912]
gi|295410923|gb|ADG05415.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912]
Length = 310
Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 153/302 (50%), Gaps = 4/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LA+ ++P + ++P++T+GDR+ + L+ +GGKGLF
Sbjct: 3 ILRIGSRKSALAMTQTRWLIEQWQK--RVPGLSAEVVPMTTRGDRVLDVPLSRVGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
EEIE+ L+ ID AVHS KD+P +L G + A RED RD I+ + DL
Sbjct: 61 VEEIERALLEKRIDAAVHSLKDLPAQLAPGTVVGAVPRREDPRDAVITRDGRPFDDLPSG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR A L R+R D++ I RG ++TRL KL + A++LA AGI RL
Sbjct: 121 ARVGTSSLRRVAQLRRYRPDLAFIPLRGNVDTRLRKLAAGEVDAVVLAAAGILRLGLGDR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ E P+ GQGA+ ++ + + ++ + +V ER LA L+G C
Sbjct: 181 ITEYLSPEICLPAVGQGALAVQCREADEDTRRSLESVEDAAARKTVEAERTCLAALEGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A + + +V DG V G D +GR AA + + +
Sbjct: 241 QVPIGALAEIRDGHIRLAAMVARPDGSELLRVVVQG--EDPAEVGRRAAADLLELGAGKL 298
Query: 305 FN 306
Sbjct: 299 LQ 300
>gi|299533189|ref|ZP_07046573.1| porphobilinogen deaminase [Comamonas testosteroni S44]
gi|298718719|gb|EFI59692.1| porphobilinogen deaminase [Comamonas testosteroni S44]
Length = 314
Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 159/300 (53%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF
Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +
Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I
Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 187 RAKFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFISN 301
+A + +G TL+ +G V + + D A +G A ++
Sbjct: 247 MPLAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQASASVTDFASANALGEQLATQLQAAGA 306
>gi|326317960|ref|YP_004235632.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374796|gb|ADX47065.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 318
Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 9/303 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H + ++ ++TKGD+I +RTL+++GGKGLF
Sbjct: 17 PIVIATRESRLALWQAEHVQALLRAR----GHAVELLGMTTKGDQILDRTLSKVGGKGLF 72
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL
Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 133 AVVGTSSLRRQVLLQALRPDLDIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGMEDR 192
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC
Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDG-KIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299
+A TL G +G + V + +A +G A +R
Sbjct: 253 SVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQVSAPVASLPEAEALGSAVAARLRAD 312
Query: 300 SNK 302
+
Sbjct: 313 GAQ 315
>gi|254440462|ref|ZP_05053956.1| porphobilinogen deaminase [Octadecabacter antarcticus 307]
gi|198255908|gb|EDY80222.1| porphobilinogen deaminase [Octadecabacter antarcticus 307]
Length = 321
Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 174/305 (57%), Gaps = 4/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ LM + + + T GD + L IG
Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMVAFDLAEAAFEVCVIKTTGDDRSLIDADIPLKVIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++G+ID AVHS KDMP GL + +LPRED RD F+S + D
Sbjct: 71 KGLFTKEIEEAMLAGQIDIAVHSTKDMPVAQPDGLVLDVFLPREDARDAFVSVKYSGIPD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ R+
Sbjct: 131 LPEGAIVGTSSLRRRAQLLAKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ D P+ QG I IE +++ +A++++ I+ + ER+FLA L
Sbjct: 191 MDDAAMGAIDLADMLPAIAQGTISIERRIDDLRARDMLAAIHDVQAGQQMAAERSFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G ++ G +L DG R G + +G++ AQ + +
Sbjct: 251 DGSCETPIAGLAMIDGDNMWLRGEILKPDGSQVFTGERRGLVTEGRAMGKELAQELLGQA 310
Query: 301 NKNVF 305
+ F
Sbjct: 311 GPDFF 315
>gi|320449225|ref|YP_004201321.1| porphobilinogen deaminase [Thermus scotoductus SA-01]
gi|320149394|gb|ADW20772.1| porphobilinogen deaminase [Thermus scotoductus SA-01]
Length = 301
Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 8/303 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LALA L + P + + T+GD+ N I
Sbjct: 2 RVIVVGTRGSALALAQTRFVVERLKE--SWPEAEFKVKTIKTRGDQGANPMEQAI----- 54
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+++ L+S EID AVHS KD+PT+ GL+I+A R+D RD F+ + L+DL
Sbjct: 55 FVKELQEALLSREIDIAVHSLKDLPTEEPPGLKIAAIPRRQDPRDAFLGKVYKRLEDLPE 114
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL
Sbjct: 115 GAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGNGEYDGIILAAAGLIRLDLRN 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L
Sbjct: 175 RIDQFLEPEVLLPAPGQGALALEVRQGDDLAEELCYALHHHPSHDRVRAERAFLKGLGAG 234
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + + A + TL G+VL DGK F G+ +A +G + AQ + +
Sbjct: 235 CLAPVGALAQVAEDGTLLLEGMVLTPDGKSFIRAEIEGDASEAEELGLELAQDVLEQGGR 294
Query: 303 NVF 305
+
Sbjct: 295 EIL 297
>gi|78777061|ref|YP_393376.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251]
gi|123727562|sp|Q30S90|HEM3_SULDN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78497601|gb|ABB44141.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251]
Length = 313
Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + ++ L + + P + + + T GDRI ++ L++IGGKGL
Sbjct: 2 KKLVIATRGSQLALWQSNHIKAILQE--QNPGLEVELNVIVTTGDRIQDKALSKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++ GE AVHS KD+PT + GL ++A RED RD +S ++ L
Sbjct: 60 FLKELEEAMLQGEAQIAVHSLKDVPTVMPDGLILAAITEREDSRDALLSEKYANIDALPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++V+GTSSLRR+ + + R D+ + D RG ++TR+ KL + AI+LA AGI RL
Sbjct: 120 NAVVGTSSLRRRMQIQKLRPDLIIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLSLLD 179
Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K + I E+ PS GQGA+ IE VN+ + +V + E + ER+F+ EL+
Sbjct: 180 AVKHVYPISLEEMVPSMGQGALGIEA-VNDAEVLRIVAGLEDEYSRIETTIERSFVDELE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I A T+ ++ +G+ S+ ++ D NIGR+ A
Sbjct: 239 GGCQVPIGVNASVLDDGTISIRAVLGLPNGEEMLSDSKITSKKDYENIGREIAAEFIEKG 298
Query: 301 NKNVF 305
K +
Sbjct: 299 AKELL 303
>gi|254452699|ref|ZP_05066136.1| porphobilinogen deaminase [Octadecabacter antarcticus 238]
gi|198267105|gb|EDY91375.1| porphobilinogen deaminase [Octadecabacter antarcticus 238]
Length = 321
Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats.
Identities = 119/306 (38%), Positives = 174/306 (56%), Gaps = 4/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ LM +P + + T GD + L IG
Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMIAFDLPESAFEVCVIKTSGDDRSLIDADIPLKVIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++G ID AVHS KDMP GL ++ +LPRED RD F+S + D
Sbjct: 71 KGLFTKEIEEAMLAGRIDIAVHSTKDMPVAQPDGLVLNVFLPREDARDAFVSVKYAGIAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ R+
Sbjct: 131 LPEGAIVGTSSLRRRAQLLVKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++++D P+ QG I IE V++ +A++++ I++ + ERAFLA L
Sbjct: 191 MHDAAIGAIDLDDMLPAIAQGTISIERRVDDLRARDMLAAIHNVQAGQQMAAERAFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A ++ G +L DG R G + +G + AQ + +
Sbjct: 251 DGSCETPIAGLAMIDCDQMWLRGEILKPDGSQVFTGERRGLVSEGAAMGMELAQELLGQA 310
Query: 301 NKNVFN 306
+ F
Sbjct: 311 GPDFFE 316
>gi|163854244|ref|YP_001642287.1| porphobilinogen deaminase [Methylobacterium extorquens PA1]
gi|163665849|gb|ABY33216.1| porphobilinogen deaminase [Methylobacterium extorquens PA1]
Length = 309
Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats.
Identities = 120/304 (39%), Positives = 172/304 (56%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKG
Sbjct: 4 SRALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121
LFT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + L DL
Sbjct: 62 LFTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++RL
Sbjct: 122 PPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGM 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LAELD
Sbjct: 182 ADVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELD 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IA A KG + G++ DG V R G DA IGRDA ++ +
Sbjct: 242 GSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWAVHREGLAADADTIGRDAGAELKRAAG 301
Query: 302 KNVF 305
F
Sbjct: 302 DVYF 305
>gi|21232940|ref|NP_638857.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766987|ref|YP_241749.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. 8004]
gi|23821678|sp|Q8P536|HEM3_XANCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81307026|sp|Q4UYZ4|HEM3_XANC8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21114777|gb|AAM42781.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66572319|gb|AAY47729.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. 8004]
Length = 304
Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L GSC
Sbjct: 181 ITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ ++GR A + +
Sbjct: 241 HVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRLVADGLFEKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|314936225|ref|ZP_07843572.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis
C80]
gi|313654844|gb|EFS18589.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis
C80]
Length = 310
Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSKQFIDKLKAI--DPSLEIEIKEIVTKGDRIVNQQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L
Sbjct: 60 FVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ +
Sbjct: 120 NSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +DG
Sbjct: 180 DVVTTYLDKDTLLPAIGQGALGIECRRNDIELLELLQKVHNNEVANCVTAERTFLAAMDG 239
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A Y + + F G+++ DGK +E + G D + +G ++ ++
Sbjct: 240 SCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGT--DPVKLGNRVSEILKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|58583630|ref|YP_202646.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
gi|75433978|sp|Q5GVL2|HEM3_XANOR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|58428224|gb|AAW77261.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 304
Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IG KGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGDKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L
Sbjct: 61 LKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL ++
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDER 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC
Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A A +G L+ G+V ++ +G+ D ++GR AQ + +
Sbjct: 241 HVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTQDLGRRVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|223648136|gb|ACN10826.1| Porphobilinogen deaminase [Salmo salar]
Length = 359
Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 152/302 (50%), Gaps = 6/302 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LA L ++ P ++ I+ ++T GD+I + L++IG K
Sbjct: 16 SRVIRIGTRKSQLARIQTDSVAEKLKGLY--PDVHLEIVGMTTTGDKILDTALSKIGEKS 73
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +SL
Sbjct: 74 LFTKELETALEKNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPKNMGKSLD 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKR 178
L SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++R
Sbjct: 134 TLPDKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKDDFSAIILAAAGLRR 193
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + +IL ED + GQGA+ IE + E+V V++ +T ERAFL
Sbjct: 194 MGWDSRVSQILGPEDCMYAVGQGALAIEVRARDEDILEMVSVLHDPNTVLRCIAERAFLR 253
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C +A K S LY G V + DG + + + + + ++
Sbjct: 254 RLEGGCSVPVAVHTEVKDSQLYLTGAVYSLDGSDSLKETMQTSIASDNKVEEQVDERVQR 313
Query: 299 IS 300
+
Sbjct: 314 VG 315
>gi|326930594|ref|XP_003211431.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog,
partial [Meleagris gallopavo]
Length = 1060
Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 35/325 (10%)
Query: 14 PLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73
LA L + + P I+ +ST GD+I + L++IG K LFT+E+E L
Sbjct: 728 QLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALE 785
Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGTS 130
E+D VHS KD+PT L G I A RE+ D + H ++L L SVIGTS
Sbjct: 786 RNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTS 845
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKKEKVIKEIL 189
SLRR A L + + D RG + TRL KL+ + AI+LA AG+KR+ E I ++L
Sbjct: 846 SLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLL 905
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ ED + GQGA+ +E + + +V V++ +T ERAF+ L+G C +A
Sbjct: 906 SPEDCLYAVGQGALAVEVRAKDQETLNMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVA 965
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-------------- 284
K LY G V + DG + + +G D
Sbjct: 966 VNTMLKDGQLYLTGAVYSLDGSDSLKETMQASVNYPQRNEDGPNDDVQHVGITAKNVSGQ 1025
Query: 285 ----AINIGRDAAQYIRFISNKNVF 305
A N+G + A + K++
Sbjct: 1026 AQEAAENLGIELASLLLSKGAKHIL 1050
>gi|206603978|gb|EDZ40458.1| Porphobilinogen deaminase [Leptospirillum sp. Group II '5-way CG']
Length = 314
Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 113/310 (36%), Positives = 164/310 (52%), Gaps = 7/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P +IG+R S LAL A S + V I P I+ + T GD I +R L+E+GG
Sbjct: 1 MSLMPLKIGSRGSELALWQARHVASMIESVSGILP---EIVVIKTTGDIILDRQLSEVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K
Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLKREDPRDVFLSPHYPDIKS 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR A + +RSD+ I RG + TR+ K+ + AI+LA AG+ RL
Sbjct: 118 LPHKARVGTSSLRRLAQIREFRSDLEFIPLRGNVGTRIRKMEDGVVEAIILAGAGLLRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++E ++ + P+ GQGA+ +E ++ L++ ++ E T SV ER L L
Sbjct: 178 HANRVREWISPQVLLPAIGQGALGLEIRTDDETTGTLIRSLSDESTHLSVAAERGVLQSL 237
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYI 296
+G C+ IA +A + + TL G VL G +A +G D +
Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIATIDEAYQMGMDLGNRL 297
Query: 297 RFISNKNVFN 306
+ + N
Sbjct: 298 LADGAEEILN 307
>gi|149928342|ref|ZP_01916583.1| porphobilinogen deaminase [Limnobacter sp. MED105]
gi|149822927|gb|EDM82172.1| porphobilinogen deaminase [Limnobacter sp. MED105]
Length = 310
Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 161/303 (53%), Gaps = 3/303 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI +R S LA+ A R L+ + + + I+ ++TKGD+I +R+L +IGGKGLF
Sbjct: 2 KIRIASRESRLAMWQAEHVRDLLLALPGVSG--VEIVGMTTKGDQILDRSLAKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+ G D AVHS KD+P + Q+ ++ RED D F+S+ SL DL
Sbjct: 60 IKELEYALLEGRADLAVHSGKDIPMDVDPEFQLLGFMTREDPHDAFVSNDYASLADLPAG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+G+SSLRR+A +L + V RG ++TRL KL++ + AI+LA AG+KRL
Sbjct: 120 AVVGSSSLRRQAQVLARYPHLKVEPLRGNLDTRLGKLDSGQYQAIVLAAAGLKRLGLHSR 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ D P+ GQGA+ +E + + ELVK + V+ ER+ L GSC
Sbjct: 180 IRNVIESTDMLPAVGQGALGLEIRAGDSQLAELVKPLIDPVCTALVSAERSVSKALGGSC 239
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ IAG+A T G+V + DGK E S + D + + +
Sbjct: 240 QVPIAGYATLNDAQTFTLRGLVASPDGKAVIEKSAQASLQDWETAANRVIEGLLQEGAQA 299
Query: 304 VFN 306
+
Sbjct: 300 LIE 302
>gi|255322661|ref|ZP_05363805.1| porphobilinogen deaminase [Campylobacter showae RM3277]
gi|255300222|gb|EET79495.1| porphobilinogen deaminase [Campylobacter showae RM3277]
Length = 311
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK +I TR S LA+ + R + + + P + + + TKGD I + L +IGG
Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKI--LSRYPQIAVELTGMKTKGDVILDTPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D
Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL
Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ I+ ++ P+ GQGA+ IE + + L++ + E ER F+A
Sbjct: 177 LRSEVAHIVPFELDQMVPAMGQGALGIEARE-DSEILNLIEFLKDEKAVIETTVERDFVA 235
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I A G + +V DG + + + ++G + +
Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDGSESIRENIVAQKSEWKSVGAELGRIFIG 295
Query: 299 ISNKNVF 305
K +
Sbjct: 296 KGAKELL 302
>gi|302391331|ref|YP_003827151.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501]
gi|302203408|gb|ADL12086.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501]
Length = 314
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 4/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ IGTR S LA+ A L + + + + TKGD+I + L+++GG
Sbjct: 1 MKGNKVIIGTRSSDLAVGQAEIVAEMLGKA--VSEYEFELEKIKTKGDKILDSPLSQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ EID AVHS KDMP +L +GL + + R D RD +S+ ++L +
Sbjct: 59 KGLFIKELEVSLLEEEIDLAVHSMKDMPAELPEGLAVLGFPERVDSRDALVSNGDRNLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178
L + IGT SLRR + LL +R D+ V+ RG I TRL KL + AI+LA AG+ R
Sbjct: 119 LPTGARIGTGSLRRTSQLLNYRPDLEVVPIRGNINTRLEKLTAEELNLDAIVLAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + I E L+ E P+ GQGA+ IE ++ + + L+ I+ + T + ER FL
Sbjct: 179 MGWKDKITEYLDDEVMLPAAGQGALAIEAREDDEEIKTLINKIDDQRTRYILQAERGFLE 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDG C+ I A +G + G+V DG+ G+ +A +G + A+ +
Sbjct: 239 RLDGDCQVPIGALAEIEGEEITLEGMVATLDGQKHLRDQITGSVGEAEELGIELAEELIA 298
Query: 299 ISNKNVFN 306
+ +
Sbjct: 299 KGAEKILQ 306
>gi|325922553|ref|ZP_08184310.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865]
gi|325546966|gb|EGD18063.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865]
Length = 304
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 168/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A + R D D +S+ +++ L L
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAIMERGDAADALVSNLYATVQALPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGFDAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L++ ++ P+P QGA+ +E ++ L+ V++ T V ERA L GSC
Sbjct: 181 ITARLDVPEWLPAPAQGAVAVECRGDDAHIHGLLAVLDAGRTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A FA +G L+ G+V ++ +G+ D ++GR AQ + +
Sbjct: 241 HVPVAAFARWEGDGLFLQGMVGSASDGRLIHAEAHGSAEDTESLGRLVAQGLFDKGAAQL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|260431649|ref|ZP_05785620.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157]
gi|260415477|gb|EEX08736.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157]
Length = 320
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 130/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR L D +P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAHETRQRLCDAFDLPEQAFEIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G ID AVHS KDMP + +GL + +LPRED+RD FIS S+ D
Sbjct: 71 KGLFTKEIEEAMLGGYIDIAVHSTKDMPVEQPQGLVLDTFLPREDVRDAFISPRLNSIHD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D++V++FRG ++TRL KL + A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLYRRPDLNVVEFRGNVQTRLKKLADGVAECTFLAMAGLRRLN 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V ++ +D P+ QG I IE ++ +A E+++ I+H +T + ERA LA L
Sbjct: 191 MQDVPATAISPDDMLPAIAQGTIGIERRADDHRAAEMLEAIHHPETAQRLAAERALLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A L G VL DG + G DA +GR A + +
Sbjct: 251 DGSCETPIAGLAEITDGQLRLRGEVLRPDGSESVVSEQMGATEDATEMGRAMASDLLRQA 310
Query: 301 NKNVFNF 307
F +
Sbjct: 311 GPGFFEW 317
>gi|220921724|ref|YP_002497025.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060]
gi|219946330|gb|ACL56722.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060]
Length = 318
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 175/304 (57%), Gaps = 2/304 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M +P RIGTR SP+ALA R + H P + ++ ++T D++ +R L+ I
Sbjct: 8 MVHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADKVLDRPLSAI 67
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I++ L R+D RD F+S A+SL
Sbjct: 68 GGKGLFTKELEQALFAGEIDLAVHSMKDVETWLPDGLVIASILERDDPRDAFLSLKARSL 127
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L S +GTSSLRR A +L R D+ ++ RG TR+ +L A LLA AG++R
Sbjct: 128 AELPAGSRVGTSSLRRGAQVLMRRPDLQIVPLRGNANTRIRRLEEGACDATLLAIAGLER 187
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + +E++ + P+ QGA+ IE + + +L++ + T ++ ER LA
Sbjct: 188 LGLAHLAQEVMGTDTMLPAVAQGALGIECRAADQELIDLLQAVACPRTTTALAAERGLLA 247
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IA A +G L G++ DG +R+G +A IG++A ++
Sbjct: 248 ELDGSCRTPIAALAEIEGDRLTLNGLLFLPDGSAHWATTRSGPAAEAAAIGKEAGADLKA 307
Query: 299 ISNK 302
+ +
Sbjct: 308 QAGE 311
>gi|154174368|ref|YP_001408386.1| porphobilinogen deaminase [Campylobacter curvus 525.92]
gi|259647805|sp|A7GYU4|HEM3_CAMC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112802609|gb|EAT99953.1| porphobilinogen deaminase [Campylobacter curvus 525.92]
Length = 311
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR S LAL + ++ LM H + ++ + TKGD I + L +IGGKGL
Sbjct: 2 KILKIATRKSALALWQSEHIKARLMAQHA--GLQVELVGMKTKGDVILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++SG+ AVHS KD+P L GL ++A RED+RD IS DL
Sbjct: 60 FTKELEDSMLSGQTHIAVHSLKDVPVAFLDGLVLAAICSREDVRDAMISQRYVKFDDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRRK LLR R D+++I RG ++TRL KL + AI+LA AGI RL
Sbjct: 120 SAKVGTTSLRRKMQLLRMRPDLNIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNLAD 179
Query: 184 VIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + P+ GQGA+ +E V++ + E +K +N E + ER F+ L+
Sbjct: 180 EVAHIYPFDIAQMTPAMGQGALGVEA-VDDAQILEKIKFLNDERSVIETRVERDFVTLLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A + IV DG + + + ++G++ A+
Sbjct: 239 GGCQVPIGINARLASEEIEINAIVGLPDGSEVITENLTAKKSEFESVGKELAREFIARGA 298
Query: 302 KNVF 305
K +
Sbjct: 299 KELL 302
>gi|85713686|ref|ZP_01044676.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A]
gi|85699590|gb|EAQ37457.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A]
Length = 316
Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats.
Identities = 138/299 (46%), Positives = 191/299 (63%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+
Sbjct: 12 TIGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL S+
Sbjct: 72 EIEEALLAGAIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPRAASLHDLPAGSI 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT+SLRR+A++LR R D+ V RG +ETRL K++ +A A LLA AG+ RL +
Sbjct: 132 VGTASLRRQAMVLRLRPDLKVNALRGNVETRLRKIDAGEADATLLALAGLNRLGLQDKAT 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
IL E+F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 192 RILETEEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRT 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I G G ++F G++++ DG +E +R G R DA +G DAA +R + + F
Sbjct: 252 PIGGHCRVNGDRIHFRGLIISPDGTESYETTREGARADAAALGADAAHELRERAGEKFF 310
>gi|223040967|ref|ZP_03611228.1| porphobilinogen deaminase [Campylobacter rectus RM3267]
gi|222877764|gb|EEF12884.1| porphobilinogen deaminase [Campylobacter rectus RM3267]
Length = 309
Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK +I TR S LA+ + R + + + P + + + TKGD I + L +IGG
Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKI--LSRYPELAVELTGMKTKGDVILDTPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D
Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL
Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ I+ ++ P+ GQGA+ IE + + L++ + E ER F+A
Sbjct: 177 LRSEVAHIVPFELDQMIPAMGQGALGIEARE-DAEILNLIEFLKDEKAVIETTVERDFVA 235
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I A G + +V DG + + + ++G + +
Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDGSESIRENIVAQKSEWKSVGAELGRIFIG 295
Query: 299 ISNKNVF 305
K +
Sbjct: 296 KGAKELL 302
>gi|120610679|ref|YP_970357.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1]
gi|120589143|gb|ABM32583.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1]
Length = 318
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 9/303 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H + ++ ++T+GDRI +RTL+++GGKGLF
Sbjct: 17 PIVIATRESRLALWQAEHVQALLRAR----GHAVELLGMTTQGDRILDRTLSKVGGKGLF 72
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL
Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 133 AVVGTSSLRRQVLLQALRPDLVIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLEGR 192
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC
Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDG-KIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299
+A TL G +G + V + +A +G A +R
Sbjct: 253 SVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQISAPVASLPEAEALGSAVAARLRAD 312
Query: 300 SNK 302
+
Sbjct: 313 GAQ 315
>gi|238022038|ref|ZP_04602464.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147]
gi|237866652|gb|EEP67694.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147]
Length = 316
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LA+ A ++ L ++ P I II ++T+GD+I ++TL++IGGKGL
Sbjct: 8 QTLTIASRESALAMWQARHIQAQLQSLY--PQCQIHIIGMTTQGDQILDKTLSKIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L D AVHS KD+P L +G ++A R + D F+S+ L++L
Sbjct: 66 FIKELETALQENRADLAVHSIKDVPMDLPQGFTLAAIGERANPFDAFVSNRYTRLEELPH 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ +
Sbjct: 126 GAIVGTSSLRREAQLRARFPHLTIRPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS
Sbjct: 186 RIRAVLPPADSLPAAGQGALGIEIAAHRTDLIDVLLPLNHAKTAACVTAERALARALGGS 245
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ +A + L G+V DG + A +GR A+ + +
Sbjct: 246 CQVPLAAYCTADDHGLLTLSGLVGHPDGSVILTAQAQAPAAYADALGRAVAKKLADDGAQ 305
Query: 303 NVF 305
+
Sbjct: 306 ELI 308
>gi|134094241|ref|YP_001099316.1| porphobilinogen deaminase [Herminiimonas arsenicoxydans]
gi|133738144|emb|CAL61189.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Herminiimonas
arsenicoxydans]
Length = 317
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 165/303 (54%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A R L ++ P I I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLALLY--PQCAIEILGMTTRGDQILDRTLSKVGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + D AVHS KD+P L +G ++A L RED RD F+S+ SL DL
Sbjct: 65 FVKELEVAIAERRADLAVHSLKDVPMSLPEGFALAAVLEREDPRDAFVSNDYASLDDLPD 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+AL+ + + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 GAIVGTSSLRRQALIAARYPKLVIRPLRGNLDTRLGKLDKGEYAAIILAAAGLKRLGMPQ 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L+ E P+PGQGA+ IE H + QE + +NHE T +V ER GS
Sbjct: 185 RIRAVLDPEQSLPAPGQGAMGIEIHADRADLQEWLAPLNHEATAQAVTAERTVSRNFGGS 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ +A FA + T+ ++ DGK NG +G A+ +
Sbjct: 245 CQIPLAAFATIENGTMRLRAMIATPDGKRVARADLNGAAHAPEALGGQIAELLHQQEANA 304
Query: 304 VFN 306
+
Sbjct: 305 ILE 307
>gi|154251802|ref|YP_001412626.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1]
gi|154155752|gb|ABS62969.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1]
Length = 308
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 131/307 (42%), Positives = 183/307 (59%), Gaps = 2/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI-VIIPLSTKGDRITNRTLTEIG 59
M+++ +RIGTR S LAL A E + P + I+ +ST GDR+ +R L+EIG
Sbjct: 1 MQRR-YRIGTRGSRLALIQANEVARRIALALHAPVEEVTEIVVISTAGDRVQDRALSEIG 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFTEEIE++L ID AVHS KDMPT L +GL I L R D RD F+S A SL
Sbjct: 60 GKGLFTEEIEEQLADARIDVAVHSMKDMPTLLPEGLVIDCLLERADPRDAFLSSKANSLM 119
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +V+GTSSLRR A + R D++V+ FRG ++TRL KL + A A LLA AG+ R+
Sbjct: 120 SLPQGAVVGTSSLRRAAQVRARRPDVTVVPFRGNVDTRLKKLADGVADATLLAMAGLTRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L+ E+ P+ QGAI IE + +A L++ ++H +T V ERAFLA
Sbjct: 180 DLLECVTAPLSPEELLPAVAQGAIGIERRAADDEAAHLLEKLHHTETGLRVAAERAFLAV 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IA A G + ++L DG HE R G DA+ +G+DA + ++
Sbjct: 240 LDGSCRTPIAALAEISGDHMRLRTMILTPDGAEIHETEREGLAADAVLLGQDAGEELKGR 299
Query: 300 SNKNVFN 306
+ + F+
Sbjct: 300 AGPHFFD 306
>gi|71892349|ref|YP_278083.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123747812|sp|Q491Z6|HEM3_BLOPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71796455|gb|AAZ41206.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 300
Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K +I TR S LA+ A + L H P +I ++P+ T GD+ N
Sbjct: 1 MKNKILKIATRKSQLAICQAQYVHNELKHYH--PTLSIELMPIVTTGDKFLNIDAKNKIK 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG F +E+E LI+ D AVHS KD+ L L + R D RD F+S ++
Sbjct: 59 KGAFIKELEHALINFRADIAVHSMKDITVPLPDELTLPVLCKRNDPRDAFVSLKYPNIDT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + SVIGTSSLRR+ + R D+ V + RG I+TRL KL + AI+LA AG++RL+
Sbjct: 119 LPIGSVIGTSSLRRQCQIRAHRPDLVVSNLRGNIDTRLKKLQYGQYDAIVLAVAGLQRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ ++ D P+ GQG I IE N+ L+ + H++T V ERA L
Sbjct: 179 LHEYIRVHIDPSDLLPAMGQGVIAIECRSNDADILSLLSPLYHQETSFRVRAERAVTTYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ C IA +A + ++ ++ DG A +G A+ +
Sbjct: 239 ESYCHLPIASYAEIEEDQIWLRALIGLPDGSKIIRTEGRAPLDQAEKLGFILAEDLL 295
>gi|34557903|ref|NP_907718.1| porphobilinogen deaminase [Wolinella succinogenes DSM 1740]
gi|55976472|sp|Q7M8L2|HEM3_WOLSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|34483621|emb|CAE10618.1| PORPHOBILINOGEN DEAMINASE [Wolinella succinogenes]
Length = 311
Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats.
Identities = 103/303 (33%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL A ++ L H+ ++ + + TKGD+I + L ++GGKGLF
Sbjct: 3 KIIIGTRGSVLALWQAEYVKAELERAHE--GLSVELKIVKTKGDKILDVPLAKVGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ GEID AVHS KD+P +L++GL +SA RED+RD F+S SL+ L L
Sbjct: 61 TKELEEMMLQGEIDLAVHSLKDVPVELIEGLTLSAITEREDVRDCFLSDKYASLETLPLG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+SLRR + RSD+ RG ++TR+ +L AI+LA AG+ RL K
Sbjct: 121 AKVGTTSLRRSMQIKSMRSDLDTESLRGNVQTRIKRLKEGDFDAIILATAGVNRLDLWKE 180
Query: 185 IKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ E P+ GQ A+ IE + + L +++ + ER F+ L+G
Sbjct: 181 VNYVIPIDTEMMIPAMGQAALGIECKEGSEAFR-LTQILEDKKARIETTAEREFVRVLEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I AY +G TL+ V DG + + +A+ +GR+ A + +
Sbjct: 240 GCQVPIGANAYLEGETLHLKVAVGLPDGSEILMDRLSAPKGEAVRLGRELAARLIAKGAR 299
Query: 303 NVF 305
+
Sbjct: 300 ELL 302
>gi|124514859|gb|EAY56370.1| Porphobilinogen deaminase [Leptospirillum rubarum]
Length = 314
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 113/310 (36%), Positives = 162/310 (52%), Gaps = 7/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P +IG+R S LAL A S + V + P I+ + T GD I +R L+E+GG
Sbjct: 1 MLPTPLKIGSRGSELALWQARHVASLIESVSGVLP---EIVVIKTTGDIILDRQLSEVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K
Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLTREDPRDVFLSPHYPDIKS 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR A + R+D+ I RG + TR+ K+ AI+LA AG+ RL
Sbjct: 118 LPQKARVGTSSLRRLAQIREIRNDLEFIPLRGNVGTRIRKMEEGVVDAIILAGAGLLRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++E ++ P+ GQGA+ +E ++ LV+ ++ E T SV ER L L
Sbjct: 178 HANRVREWISPRVLLPAIGQGALGLEIRTDDETTGTLVRSLSDESTHLSVAAERGVLQSL 237
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYI 296
+G C+ IA +A + + TL G VL G + DA +G D +
Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIVTIDDAYQMGIDLGNRL 297
Query: 297 RFISNKNVFN 306
+ + N
Sbjct: 298 LSDGAEEILN 307
>gi|239637532|ref|ZP_04678504.1| porphobilinogen deaminase [Staphylococcus warneri L37603]
gi|239596750|gb|EEQ79275.1| porphobilinogen deaminase [Staphylococcus warneri L37603]
Length = 308
Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 169/304 (55%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGL
Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKQVR--PDLDIEIKEIVTKGDRIVDKQLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L
Sbjct: 60 FVKEIQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
S+IGTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ +
Sbjct: 120 GSIIGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWSD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FLAE+DG
Sbjct: 180 DIVTTYLDKDILLPAIGQGALGIECRSDDEELLELLKEVHNKDVEKCVTAERTFLAEMDG 239
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC+ I G+A + F G+++ DG +E + G +G++ ++ ++
Sbjct: 240 SCQVPIGGYATINSQQQIEFTGLIMTPDGTERYEHTAIG--ESPTELGKEVSRVLKEQGA 297
Query: 302 KNVF 305
+
Sbjct: 298 YEII 301
>gi|262199948|ref|YP_003271157.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365]
gi|262083295|gb|ACY19264.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365]
Length = 320
Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats.
Identities = 105/317 (33%), Positives = 161/317 (50%), Gaps = 13/317 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ I TR S LAL A R + V P + ++ + T+GD+I + L++IGG
Sbjct: 1 MSERTIHISTRGSQLALWQAHHVRDEIRRVR--PAWQVELVIIKTQGDKILDVPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ G D AVHS KD+P +L GL ++A RED D + + L +
Sbjct: 59 KALFVKEIEQALLDGRADVAVHSMKDVPAELAPGLFMAATSRREDPYDALCTRDGRGLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA + +GTSSLRR+ +L R D+ + RG + TRL KL++ A++LA AG+KRL
Sbjct: 119 LAEGATLGTSSLRRQCQILARRPDLRIEMLRGNVPTRLGKLDDGSFDAVILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNN-----PKAQELVKVINHEDTWDSVNCERA 235
+ I + L+ P+ GQG + IET + + L + ++ V ERA
Sbjct: 179 HGERISQRLDGGVCVPAVGQGVLGIETRQGDAPADRELVEALREALHDPAEERRVVAERA 238
Query: 236 FLAELDGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A L GSC++ +A A +G TL G+ DG G DA +G
Sbjct: 239 MMAALGGSCQTPLAAHASYRGDSDPVAGTLVIEGLCGRPDGSEILRAQVEGRAEDAQALG 298
Query: 290 RDAAQYIRFISNKNVFN 306
A+ +R + + +
Sbjct: 299 SSLAEELRGQGAQAIID 315
>gi|298292774|ref|YP_003694713.1| porphobilinogen deaminase [Starkeya novella DSM 506]
gi|296929285|gb|ADH90094.1| porphobilinogen deaminase [Starkeya novella DSM 506]
Length = 309
Score = 338 bits (867), Expect = 7e-91, Method: Composition-based stats.
Identities = 124/300 (41%), Positives = 176/300 (58%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLAL A R +L+ H P + + + T GD IT+R L+E GGKGLFT
Sbjct: 8 LRLGTRGSPLALWQAHAVRDALVKAHGWAPEAVEVQVIRTTGDAITDRALSEAGGKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ ID AVHSAKDM TKL GL + YLPR D+RD I SL DL +
Sbjct: 68 KELEEALLDRRIDLAVHSAKDMATKLPDGLHLVGYLPRADVRDALILREGSSLADLKPGA 127
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRR+A L R R D+ V RG + TRL+K+ + + LLA AG+ RL
Sbjct: 128 KVGTASLRREAQLRRLRPDLQVSLLRGNVHTRLSKVESGEFDGTLLALAGLTRLGMADKA 187
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L++ DF P+ GQGA+ IE+ + L+ + T ++ ERA+L ELDGSC+
Sbjct: 188 SALLDVADFLPAVGQGAVAIESRFGDIAVDALLVPVTCPATGLALRVERAYLGELDGSCR 247
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ I G A +G + F G+VL+ DG ++E+ R G A+ +G A Q +R + ++
Sbjct: 248 TPIGGLAEVQGEEIRFRGVVLSPDGSRYYEIVRYGPANRALELGLAAGQEMRAMVPADLL 307
>gi|268317443|ref|YP_003291162.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252]
gi|262334977|gb|ACY48774.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252]
Length = 312
Score = 338 bits (867), Expect = 8e-91, Method: Composition-based stats.
Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 7/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +GTR S LAL A RS L ++ + + T GD I + L +IG
Sbjct: 1 MPEPTLILGTRGSALALRQATLIRSFLEAR----GVSVQVEIIRTTGDHIQDVPLAKIGA 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SL 118
KGLFT+E+++ L+ G ID AVHS KD+PT++ +GL ++A R DVF++H L
Sbjct: 57 KGLFTKELDQALLEGRIDLAVHSLKDLPTEMPEGLVVAAVPERAPPWDVFVAHPDFAGRL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+DL +V+ TSSLRR+A L WRSD+ V+ RG ++TRL KL H ++LA AG++R
Sbjct: 117 EDLPTGAVVATSSLRRQAQLRAWRSDLQVVPVRGNVDTRLRKLEAEGWHGLILAEAGLQR 176
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + +++ + E P+ GQGA+ + N + + L++ ++H T +V ERA L
Sbjct: 177 LGLLERVRQRIAPEILLPAVGQGALGVVCAEANRRVRALLQALHHAPTAAAVRAERALLH 236
Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L G C+ +A A + TL G V++ DG+ E + G + +G A+ +
Sbjct: 237 ALQGGCQVPVAALAAVEADGTLVLRGRVVSLDGRQLVEGVQRGAMAEPEAVGEALAETLL 296
Query: 298 FISNKNVFN 306
+ +
Sbjct: 297 QQGARAILE 305
>gi|254463278|ref|ZP_05076694.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2083]
gi|206679867|gb|EDZ44354.1| porphobilinogen deaminase [Rhodobacteraceae bacterium HTCC2083]
Length = 295
Score = 337 bits (866), Expect = 9e-91, Method: Composition-based stats.
Identities = 128/293 (43%), Positives = 173/293 (59%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA A+ETR L +P VI + T GD+I +R L EIGGKGLFT EIE ++S
Sbjct: 1 MALAQAYETRRRLSGAFDLPEEAFVIKVIKTTGDKILDRPLKEIGGKGLFTREIEDDMLS 60
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
G ID AVHS KDMP +GL + YLPRED+RD F+S + L DL +V+GTSSLRR
Sbjct: 61 GAIDIAVHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSSGHERLADLPSGAVVGTSSLRR 120
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
+A LL +R D++V++FRG ++TRL KL + A LA AG++RL V K + E+
Sbjct: 121 RAQLLNYRPDLNVVEFRGNVQTRLKKLEDKVADCTFLAMAGLRRLDMAHVAKSAIETEEM 180
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+ QGAI IE +N+ A E++ I+ T + ERAFLA LDGSC++ IAG A
Sbjct: 181 LPAVAQGAIGIERRINDTNAAEMLAAIHDTQTGQRLAAERAFLAALDGSCETPIAGLAEL 240
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
GS + F G VL DG +G D + +G A + + + F +
Sbjct: 241 DGSNMRFRGQVLRPDGSESIGDDVSGTIEDGVAMGEAMAAKLLAEAGEGFFEW 293
>gi|296162267|ref|ZP_06845062.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1]
gi|295887534|gb|EFG67357.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1]
Length = 332
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 164/304 (53%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G +S + RED RD +S+T SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMALPEGFALSTIMEREDPRDALVSNTYDSLAALPEG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGER 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+ +A +A L+ GIV DG+ + AI +G++ A +
Sbjct: 250 EVPLAAYATWHDGALHLRGIVATPDGQRVLSAQASAPATSVEQAIALGQEVASALEQQGA 309
Query: 302 KNVF 305
+
Sbjct: 310 MEIV 313
>gi|332208884|ref|XP_003253541.1| PREDICTED: porphobilinogen deaminase, partial [Nomascus leucogenys]
Length = 332
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 17/304 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFRHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCDAINI 288
L+G C +A K LY G V + DG + + +G D +
Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316
Query: 289 GRDA 292
G A
Sbjct: 317 GITA 320
>gi|73540406|ref|YP_294926.1| porphobilinogen deaminase [Ralstonia eutropha JMP134]
gi|72117819|gb|AAZ60082.1| hydroxymethylbilane synthase [Ralstonia eutropha JMP134]
Length = 334
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 20 KLVIASRESRLAMWQAEYVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E + G D AVHS KD+P +L G ++A + RED RD +S T SL+++
Sbjct: 78 VKELEFAMAEGRADLAVHSLKDVPMELPDGFALTAVMEREDPRDALVSSTFASLEEMPAG 137
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 138 TVVGTSSLRREAALRARYPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDR 197
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE P + +NH+ T +V ERA L GSC
Sbjct: 198 IRALIAPEASLPAAGQGALGIEILSTRPDVAAWLSPLNHQPTALAVTAERAVSRMLGGSC 257
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFISN 301
+ +A A G L V DG S G D A +G AA+ +
Sbjct: 258 QVPLAAHARWVGDQLRLDAFVAMPDGSRQTRASAAGLVVDAAAAEALGASAARDLLSQGA 317
Query: 302 KNVF 305
+
Sbjct: 318 AEIL 321
>gi|257092424|ref|YP_003166065.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044948|gb|ACV34136.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 315
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 152/300 (50%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A L +++ P + I+ ++T+GD+I +R L IGGKGLF
Sbjct: 11 LVIASRESRLAMWQAQHVSGRLTELY--PQTAVDILGMTTRGDQILDRPLAAIGGKGLFI 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + G D AVHS KD+P ++ +G ++A RE+ D F+S+ L +L ++
Sbjct: 69 KELEVAMQQGRADLAVHSMKDLPMEMPEGFALAAISVRENPCDAFVSNRFGGLAELPANA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + + RG ++TRL KL+ AI+LA AG+ RL I
Sbjct: 129 VVGTSSLRREAMLRAGYPQLEIRSLRGNLDTRLRKLDAGDYDAIILAAAGLIRLGLTDRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K +L E P+PGQG + IE LV +N T V ERAF L GSC+
Sbjct: 189 KAVLTPEQSLPAPGQGVLGIEVLSARVDLLTLVAPLNDVATAHCVRAERAFSRALGGSCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A A L+ G + DG+ G D +IG AQ + +
Sbjct: 249 IPLAAHAVLDSGALWLRGWIATPDGRHSLSGELRGLPEDDESIGCRLAQALHERGADAIL 308
>gi|118444575|ref|YP_878763.1| porphobilinogen deaminase [Clostridium novyi NT]
gi|189028087|sp|A0Q2B1|HEM3_CLONN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118135031|gb|ABK62075.1| porphobilinogen deaminase [Clostridium novyi NT]
Length = 300
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 106/298 (35%), Positives = 159/298 (53%), Gaps = 6/298 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL + K P + +STKGDRI + L +IG KGLF
Sbjct: 2 KIVVGSRGSKLALTQTNWVIDKIKQ--KYPQIQFEVKIISTKGDRIQHIALDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123
+EIE++LISG+ID AVHS KDM T++ + L+ S RED RDV I + S+ +L +
Sbjct: 60 VKEIEEQLISGDIDMAVHSMKDMSTEMPEELKFSYVPKREDYRDVLILNKKYNSIDELPM 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGT S RRK LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL ++
Sbjct: 120 NAKIGTGSKRRKYQLLQYRDDLNIVPIRGNVETRINKIEMENLHGVVLASAGIKRLNIQE 179
Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ LN + PSP QG + +E + +E++K I +++ ERAFL +
Sbjct: 180 KLDYNIFYLNEDIMLPSPAQGILALEIRKDREDLEEILKSIEDKNSSIQAVAERAFLKGV 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C I + G++ DG S G DA IG + A+ +
Sbjct: 240 NGGCHVPIGAICNINKDNVELTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIVLK 297
>gi|194212756|ref|XP_001501130.2| PREDICTED: similar to hydroxymethylbilane synthase [Equus caballus]
Length = 348
Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats.
Identities = 104/337 (30%), Positives = 152/337 (45%), Gaps = 48/337 (14%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 KVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLDISPXRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWQNRM-------------GQGALGVEVRAKDQDILDLVGVLHDPETLLCCLAERAFLRH 243
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G +
Sbjct: 244 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIHVPAQHEDGPEDNPQLV 303
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 304 GITARNIPREAQLAAENLGISLANLLLSKGAKNILDV 340
>gi|255102624|ref|ZP_05331601.1| porphobilinogen deaminase [Clostridium difficile QCD-63q42]
gi|255308450|ref|ZP_05352621.1| porphobilinogen deaminase [Clostridium difficile ATCC 43255]
Length = 301
Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats.
Identities = 106/294 (36%), Positives = 158/294 (53%), Gaps = 3/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L K P + I + TKGD I N +L +IG KGLF
Sbjct: 3 IVVGTRGSNLALIQTEWVINELKK--KYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL
Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R +
Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+A + ++ G+ S+GK S +G+ +G A+ +
Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLK 294
>gi|150865873|ref|XP_001385264.2| hypothetical protein PICST_47071 [Scheffersomyces stipitis CBS
6054]
gi|149387129|gb|ABN67235.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 372
Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 149/316 (47%), Gaps = 17/316 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG R S LA+ + + + + P N I+ LST GD+I N+ L GGK L+T
Sbjct: 26 IQIGGRKSTLAVVQSEIVKKEIEEA--FPHINCSILALSTLGDKIQNKPLYSFGGKSLWT 83
Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
+E+E L+ ++D VHS KDMPT L ++ L RED RD + ++
Sbjct: 84 KELEILLLDSIDEFPQLDLIVHSLKDMPTNLPDEFELGCILKREDPRDALVMRAGSPYKT 143
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175
L DL SV+GTSS+RR + L++ + RG ++TRL+KL++ I+LA AG
Sbjct: 144 LDDLPAGSVVGTSSIRRSSQLVKNYPHLKFDSVRGNLQTRLSKLDDDSQPFECIILASAG 203
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ + + LN + GQGA+ +E N+ K + ++ I+H T ER+
Sbjct: 204 LIRVGLGHRVTDYLNAPHMYYAVGQGALGVEIRKNDTKMKNILAKISHIPTSLCCYAERS 263
Query: 236 FLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGR 290
+ L+G C I L F I+++ DG F E A +G
Sbjct: 264 LMRYLEGGCSVPIGVHTNYDEDSKVLKFEAIIVSPDGTQFVEDELEAQVETLQQAEALGI 323
Query: 291 DAAQYIRFISNKNVFN 306
+ K++ +
Sbjct: 324 QLGDRLIAKGAKDILD 339
>gi|209965647|ref|YP_002298562.1| porphobilinogen deaminase [Rhodospirillum centenum SW]
gi|209959113|gb|ACI99749.1| porphobilinogen deaminase [Rhodospirillum centenum SW]
Length = 323
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 132/306 (43%), Positives = 179/306 (58%), Gaps = 3/306 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60
K+P RIGTR SPLALA A ETR L + H P I I+ + T GDRI +RTL E GG
Sbjct: 2 KQPLRIGTRGSPLALAQAHETRRRLAEAHPHLAEPDAIEIVVIKTTGDRILDRTLMEAGG 61
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L + ID AVHS KD+PT GLQ++A LPRED RD + L +
Sbjct: 62 KGLFTKEIEEALQAETIDLAVHSMKDVPTWRQTGLQLTAMLPREDPRDAWFCRHGCGLDE 121
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A +L R D+ V+ FRG ++TR+ KL + A LLA AG++RL
Sbjct: 122 LPAGAVVGTASLRRQAQILARRPDLKVVPFRGNVQTRMTKLAEGQVDATLLALAGLRRLG 181
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + + + P+ QGAI IET + LV +NH +T V ER LA L
Sbjct: 182 LVEHMTAAIETDVMLPAVAQGAIGIETRAADDVTNALVAALNHAETMTRVTAERGVLATL 241
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DGSC++ IA A G +L +V+ +G+ F+ R G+ DA +G DA Q ++
Sbjct: 242 DGSCRTPIAALAELPGDGSLTLSALVIRPNGQEFYRTERRGDPDDAEAMGIDAGQELKAK 301
Query: 300 SNKNVF 305
+ F
Sbjct: 302 LPPDFF 307
>gi|126701044|ref|YP_001089941.1| porphobilinogen deaminase [Clostridium difficile 630]
gi|122973521|sp|Q180R9|HEM3_CLOD6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115252481|emb|CAJ70324.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Clostridium
difficile]
Length = 301
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 106/294 (36%), Positives = 158/294 (53%), Gaps = 3/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L K P + I + TKGD I N +L +IG KGLF
Sbjct: 3 IVVGTRGSNLALIQTEWVINELKK--KYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL
Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLANGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R +
Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSAIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+A + ++ G+ S+GK S +G+ +G A+ +
Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLK 294
>gi|254977043|ref|ZP_05273515.1| porphobilinogen deaminase [Clostridium difficile QCD-66c26]
gi|255094370|ref|ZP_05323848.1| porphobilinogen deaminase [Clostridium difficile CIP 107932]
gi|255316123|ref|ZP_05357706.1| porphobilinogen deaminase [Clostridium difficile QCD-76w55]
gi|255518784|ref|ZP_05386460.1| porphobilinogen deaminase [Clostridium difficile QCD-97b34]
gi|255651962|ref|ZP_05398864.1| porphobilinogen deaminase [Clostridium difficile QCD-37x79]
gi|260684926|ref|YP_003216211.1| porphobilinogen deaminase [Clostridium difficile CD196]
gi|260688584|ref|YP_003219718.1| porphobilinogen deaminase [Clostridium difficile R20291]
gi|306521710|ref|ZP_07408057.1| porphobilinogen deaminase [Clostridium difficile QCD-32g58]
gi|260211089|emb|CBA66474.1| porphobilinogen deaminase [Clostridium difficile CD196]
gi|260214601|emb|CBE07178.1| porphobilinogen deaminase [Clostridium difficile R20291]
Length = 301
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 106/294 (36%), Positives = 158/294 (53%), Gaps = 3/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L K P + I + TKGD I N +L +IG KGLF
Sbjct: 3 IVVGTRGSTLALIQTEWVINELKK--KYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL
Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R +
Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+A + ++ G+ S+GK S +G+ +G A+ +
Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLK 294
>gi|242015312|ref|XP_002428308.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis]
gi|212512893|gb|EEB15570.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis]
Length = 356
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 36/334 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LAL+ + L + P I+ + T GD+I ++ L +IG K LFT
Sbjct: 7 LKVGSRKSQLALSQTQIIVNQLKE--NFPDLKFDIVTMLTTGDKILDKPLPKIGEKSLFT 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD---LA 122
+E+E L E+D VHS KD+PT L L I A L RED RD + + + K+ L
Sbjct: 65 KELEAALEKNEVDFVVHSLKDLPTSLPPNLTIGAILKREDPRDALVVNKNLNFKNVSSLP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKK 181
SVIGTSSLRR A L R ++ V + RG + TRL KL+ I+LA AG+KRLK
Sbjct: 125 ESSVIGTSSLRRCAQLCRNYPNLKVENIRGNLNTRLKKLDEGDKYTGIVLAAAGLKRLKY 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I +IL + + GQGA+ +E + NN K ++++V+N T V ER+FL L
Sbjct: 185 DDRITQILEPNEMLYAVGQGALAVECNKNNEKVLDILEVLNDHSTILRVIAERSFLKTLG 244
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNGNRCDA-------------- 285
G C + +A + LY G V + +G+ + S + +
Sbjct: 245 GGCSAPVAVSTKLEEKELYLTGAVWSLNGEKHIQKTKSVTISSDEPLRKKSRVMGESHAE 304
Query: 286 --------------INIGRDAAQYIRFISNKNVF 305
N+G AQ + + N+
Sbjct: 305 ITARNISNNDLNLSENLGILLAQDLIKLGALNII 338
>gi|29655352|ref|NP_821044.1| porphobilinogen deaminase [Coxiella burnetii RSA 493]
gi|212213517|ref|YP_002304453.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212]
gi|39931503|sp|Q83A37|HEM3_COXBU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706284|sp|B6J3T6|HEM3_COXB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|29542624|gb|AAO91558.1| porphobilinogen deaminase [Coxiella burnetii RSA 493]
gi|212011927|gb|ACJ19308.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212]
Length = 307
Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 160/304 (52%), Gaps = 4/304 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK
Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L L
Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKG--ELSTL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L
Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + IA A K L + ++ DG++ + GN +A IG A +
Sbjct: 239 GDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQLLEQGG 298
Query: 302 KNVF 305
++
Sbjct: 299 DSLL 302
>gi|221124344|ref|XP_002162635.1| PREDICTED: similar to hydroxymethylbilane synthase a [Hydra
magnipapillata]
Length = 450
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 8/299 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F I TR S LAL A ++ L ++ ++ ++TKGD+I +R+L+++GGKGLF
Sbjct: 150 TFTIATRESRLALWQAEHVKALLEQSGA----SVSLLGMTTKGDQILDRSLSKVGGKGLF 205
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL
Sbjct: 206 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKG 265
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E
Sbjct: 266 AVVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESR 325
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC
Sbjct: 326 IRAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSC 385
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNG---NRCDAINIGRDAAQYIRFI 299
+A +A G L+ ++G + +G + +A +G A+ ++
Sbjct: 386 SMPLAAYATISGDELHIRAAWGDAEGIQPVVYARASGLAKDAPEATALGEQVARDLQAA 444
>gi|255657374|ref|ZP_05402783.1| porphobilinogen deaminase [Clostridium difficile QCD-23m63]
gi|296448968|ref|ZP_06890759.1| hydroxymethylbilane synthase [Clostridium difficile NAP08]
gi|296879793|ref|ZP_06903766.1| hydroxymethylbilane synthase [Clostridium difficile NAP07]
gi|296262194|gb|EFH08998.1| hydroxymethylbilane synthase [Clostridium difficile NAP08]
gi|296429082|gb|EFH14956.1| hydroxymethylbilane synthase [Clostridium difficile NAP07]
Length = 301
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 107/294 (36%), Positives = 159/294 (54%), Gaps = 3/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L K P + I + TKGD I N +L +IG KGLF
Sbjct: 3 IVVGTRGSNLALIQTEWVINELKK--KYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL
Sbjct: 61 KEIEQQLLYGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPRG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R +
Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L ++ P+P QGA+ IE N+ K + +V + E+T + ER FL ++GSC
Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSKIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+A + ++ G+ S+GK S +G+ +G A+ +
Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLK 294
>gi|153206963|ref|ZP_01945781.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177']
gi|154707682|ref|YP_001425472.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111]
gi|165918283|ref|ZP_02218369.1| porphobilinogen deaminase [Coxiella burnetii RSA 334]
gi|212219568|ref|YP_002306355.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154]
gi|189028088|sp|A9KDC4|HEM3_COXBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706283|sp|B6J6K0|HEM3_COXB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120577036|gb|EAX33660.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177']
gi|154356968|gb|ABS78430.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111]
gi|165918143|gb|EDR36747.1| porphobilinogen deaminase [Coxiella burnetii RSA 334]
gi|212013830|gb|ACJ21210.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154]
Length = 307
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 160/304 (52%), Gaps = 4/304 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK
Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L L
Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKG--ELSTL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L
Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + IA A K L + ++ DG++ + GN +A IG A +
Sbjct: 239 GDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAQRIGFKVASQLLEQGG 298
Query: 302 KNVF 305
++
Sbjct: 299 DSLL 302
>gi|323525182|ref|YP_004227335.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001]
gi|323382184|gb|ADX54275.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001]
Length = 349
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD +S+ SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALATIMEREDPRDALVSNDYDSLAALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAER 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+ +A +A L+ G+V DG+ + A+ +GR+ A +
Sbjct: 250 EVPLAAYATWHDGALHLRGVVATPDGQRVLSAHASAPAPTTERAVALGREVASALEQQGA 309
Query: 302 KNVF 305
+
Sbjct: 310 MEIV 313
>gi|116690445|ref|YP_836068.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424]
gi|105893551|gb|ABF76716.1| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054]
gi|116648534|gb|ABK09175.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424]
Length = 403
Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 87 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 144
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 145 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 204
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 205 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 264
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 265 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 324
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 325 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 384
Query: 302 KNVFN 306
++
Sbjct: 385 LDIVQ 389
>gi|157164515|ref|YP_001466695.1| porphobilinogen deaminase [Campylobacter concisus 13826]
gi|259647804|sp|A7ZD37|HEM3_CAMC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112800491|gb|EAT97835.1| porphobilinogen deaminase [Campylobacter concisus 13826]
Length = 309
Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 158/304 (51%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR S LAL + ++ + HK +V+ + TKGD I + L +IGGKGL
Sbjct: 2 KEIKIATRKSILALWQSEHIKARIEAQHK--GMKVVLEGMKTKGDVILDTPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ GE D AVHS KD+P +GL+++A RED RD IS DL
Sbjct: 60 FTKELEDSMLKGETDIAVHSLKDVPVVFPEGLRLAAICSREDTRDAMISEKFAKFSDLPH 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AGI RL +
Sbjct: 120 GAKVGTTSLRRKMQLLIMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNIKA 179
Query: 184 VIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I ++ P+ GQGA+ IE + + + +N E+ ER F++ L+
Sbjct: 180 EVAHIYTFGFDEMIPAMGQGALGIEAR-DEKQILDETSFLNDENAVIETTIERDFVSVLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A KG + IV DG + + S ++ ++G++ A
Sbjct: 239 GGCQVPIGISARLKGDEISIDAIVGLPDGSEYIKDSLKTSKDKFQSVGKELAHKFIEKGA 298
Query: 302 KNVF 305
+ +
Sbjct: 299 RELL 302
>gi|186476930|ref|YP_001858400.1| porphobilinogen deaminase [Burkholderia phymatum STM815]
gi|238058733|sp|B2JEN9|HEM3_BURP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|184193389|gb|ACC71354.1| porphobilinogen deaminase [Burkholderia phymatum STM815]
Length = 327
Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G +S + RED RD F+S+ SL L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFVLSTIMEREDPRDAFVSNQYDSLAALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A+L ++ V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 131 SVVGTSSLRREAMLRARYPELVVKPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLGER 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ D P+ GQGA+ IE + ++HE T +V ER L GSC
Sbjct: 191 IRSLLDPADSLPAAGQGALGIEIRAGRDDLAAWLAPLHHEHTAAAVEAERMVSRTLGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFISN 301
+ +A +A L+ GIV DG+ + A+ +GR+ A +
Sbjct: 251 EVPLAAYATWHDGALHLRGIVATPDGERVLSAQASAPAATTDAALELGREVASQLEAQGA 310
Query: 302 KNVF 305
++
Sbjct: 311 LDIV 314
>gi|171319139|ref|ZP_02908260.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5]
gi|171095659|gb|EDT40618.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5]
Length = 328
Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 131 AVVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 191 IRTLIDVEDSPPAAGQGALGIEIAAHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DG+ G DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGA 310
Query: 302 KNVFN 306
+++ N
Sbjct: 311 RDIVN 315
>gi|210621716|ref|ZP_03292765.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275]
gi|210154598|gb|EEA85604.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275]
Length = 299
Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 3/296 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LAL L + K P + + TKGD+I + +L +IG KGLF
Sbjct: 2 KIRVGTRGSNLALIQTNWAIDRLKE--KFPEVEFEVKIIKTKGDKILHLSLDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLAL 123
+EIE +L+ GEID AVHS KDMP ++++GL+ +A RED RDV I S +L +
Sbjct: 60 VKEIESQLLEGEIDLAVHSMKDMPAEVVEGLKFAAVPKREDPRDVIILREGLNSFDELPI 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT S RRK LLR R D++++ RG IETR++K+ + I+LA +G+ R E+
Sbjct: 120 GATIGTGSKRRKYQLLRKRPDLNIVPIRGNIETRISKIESENLDGIVLAASGVIRADLEE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L ++ P+P QGA+ +E N+ + ++++ I E + + ER++LA +DGS
Sbjct: 180 KITEFLPVDLMIPAPAQGALALEIRENDEELEKMIDAIKDEISQIQTDAERSYLAGIDGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + + G L GI DG+ S G+R + +G + A+ +
Sbjct: 240 CHIPMGAYCEVDGEKLTLTGIFGDEDGEKITVASLEGDRDNPKELGSNLAKLVLKK 295
>gi|172058146|ref|YP_001814606.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15]
gi|254800251|sp|B1YJV1|HEM3_EXIS2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|171990667|gb|ACB61589.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15]
Length = 308
Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 163/304 (53%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LA+ L P+ I + TKGDRI + TL+++GGKGL
Sbjct: 2 RKIIVGSRSSKLAMTQTKWVIEQLKQAGA--PYEFEIKNIITKGDRILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+++I +ID AVHS KD+P++L GL I A R D RD I+ T L L
Sbjct: 60 FVKEIEQQMIDEDIDFAVHSMKDLPSELPTGLIIGATPSRVDARDALITTTGGGLDSLPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+++GTSSLRR + LL+ R D+ + RG I+TRL KL ILLA AG++R+ E
Sbjct: 120 GAIVGTSSLRRGSQLLKLRPDLKIESIRGNIDTRLEKLKTGPFDGILLAAAGLQRMGWSE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ E ++ +D P+ GQG + IE N+ + ++L+ +I+ + T ER+FLA ++G
Sbjct: 180 DIVSEYISTDDMIPAVGQGILAIECRANDQEVRDLLNLIHDQMTEKVAFAERSFLAAIEG 239
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC + GFA + G + + DG+ D + +G+ A +
Sbjct: 240 SCHVPVGGFATINEDLSTTLVGFLGSVDGQQILLERET--SLDPMQLGQTVATRLLDAGG 297
Query: 302 KNVF 305
+ +
Sbjct: 298 REIL 301
>gi|330824252|ref|YP_004387555.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601]
gi|329309624|gb|AEB84039.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601]
Length = 309
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 157/301 (52%), Gaps = 8/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H++ ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 9 PIVIATRESQLALWQAEHVQALLAAR----GHSVSLLGMTTRGDQILDRTLSKVGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L
Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACIMEREDPRDAFVSPHHASLDELPQG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC
Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK----IFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+A G TL +G+ SR +A +G A +R
Sbjct: 245 SMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGSSRVATLDEADALGLAVAGRLRAAG 304
Query: 301 N 301
Sbjct: 305 A 305
>gi|319763492|ref|YP_004127429.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
gi|317118053|gb|ADV00542.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
Length = 309
Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 157/301 (52%), Gaps = 8/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H++ ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 9 PIVIATRESQLALWQAEHVQALLAAR----GHSVSLLGMTTRGDQILDRTLSKVGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L
Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACVMEREDPRDAFVSPHHASLDELPQG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC
Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK----IFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+A G TL +G+ SR +A +G A +R
Sbjct: 245 SMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGSSRVATLDEADALGLAVAGRLRAAG 304
Query: 301 N 301
Sbjct: 305 A 305
>gi|326409887|gb|ADZ66952.1| Porphobilinogen deaminase [Brucella melitensis M28]
Length = 277
Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats.
Identities = 129/273 (47%), Positives = 179/273 (65%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P I I+P+ST GDRI +R L+E+GGKGLFTEEIE+ L G ID AVHS KDMPT L +
Sbjct: 2 PEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTALPE 61
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL +S +L RED RD FI +A+ DL + +G+SSLRR+AL+ R R DI V+ +RG
Sbjct: 62 GLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRRQALIRRLRPDIEVVMYRGN 121
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
++TRL KL+ + LA AG++RL VI ++L+ FPP+PGQGAI IE+ + + +
Sbjct: 122 VDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDVLDPSVFPPAPGQGAIGIESRIGDER 181
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L+ + H +T ++ CERAFL LDGSC++ IAG A +G L F G++L DG+
Sbjct: 182 IDVLLAPLAHRETQIALACERAFLGALDGSCRTPIAGLATVEGDRLSFRGMILTPDGRQA 241
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
HEV+ G DA +G DAA +R ++ + F+
Sbjct: 242 HEVTAEGVVSDAAALGTDAANRVRAMAGPHFFD 274
>gi|116622285|ref|YP_824441.1| porphobilinogen deaminase [Candidatus Solibacter usitatus
Ellin6076]
gi|116225447|gb|ABJ84156.1| hydroxymethylbilane synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 297
Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats.
Identities = 115/301 (38%), Positives = 154/301 (51%), Gaps = 11/301 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LAL A + L H I + T GD+IT+ L ++G KGLFT
Sbjct: 2 LVIASRGSQLALWQAHWVEAQLQAA----GHECRIEIIKTTGDKITDVPLAKVGTKGLFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G AVHS KD+PT+L +GL + A RED RD I ++L +L L +
Sbjct: 58 KEIEEALLDGRAQLAVHSLKDLPTELPEGLVLGAVPKREDPRDAVI---GKTLAELPLGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R R D+ V RG ++TRL KL+ + AILLA AG+KRL I
Sbjct: 115 KVGTSSLRRSAQLKRLRPDLVVESIRGNLDTRLRKLDEGQYDAILLAAAGMKRLGWGARI 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
EIL + P+ GQGA+ IET L V+NH DT +V ER L L G C+
Sbjct: 175 AEILPPDLMCPAVGQGALAIETRAGFV----LPAVLNHADTHTAVLAERGLLGALGGGCQ 230
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I A G + G+V A DG G +A IG+ + + +
Sbjct: 231 VPIGAHATVAGGRVRLLGLVAAPDGSEIVRAEAEGASGEAAEIGKRLGAELLARGARRIL 290
Query: 306 N 306
+
Sbjct: 291 D 291
>gi|332527780|ref|ZP_08403819.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2]
gi|332112176|gb|EGJ12152.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2]
Length = 309
Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 152/310 (49%), Gaps = 9/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M I TR S LAL A R L + ++ ++TKGD+I +R L+++GG
Sbjct: 1 MSSNTI-IATRESRLALWQAEHVRDVLTARF---GLAVELLGMTTKGDQILDRALSKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L G AVHS KD+P L G ++A RED RD ++S+ ++L
Sbjct: 57 KGLFVKELETALEEGRAHLAVHSLKDVPMDLPPGFALAAIWEREDPRDAWVSNQYENLDA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 117 LPQGACVGTSSLRRVVQLLARRPDLKIEPLRGNLDTRLRKLDEGGYDAIVLAAAGLKRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + + P+ GQGA+ IE ++ + +EL+ H T+ + + ERA L
Sbjct: 177 LGARIRSLFDTSVMIPAAGQGALGIEIREDDTRLKELLAQTLHLPTFLACHAERAVSRSL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL--ASDGKIFHEVSRNGNRCD---AINIGRDAAQY 295
GSC +A F L + + +V G D A +G AA
Sbjct: 237 GGSCSMPLAAFGQWNDGVLTIDAALGHSTELTRPLIKVRVTGTPTDEASARALGEHAAAL 296
Query: 296 IRFISNKNVF 305
+R +
Sbjct: 297 LREAGAGDYL 306
>gi|71899004|ref|ZP_00681170.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|71731250|gb|EAO33315.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
Length = 305
Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIATLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + + G+V + + +GR AQ + +
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELL 301
>gi|156846242|ref|XP_001646009.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM
70294]
gi|156116680|gb|EDO18151.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM
70294]
Length = 327
Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats.
Identities = 98/321 (30%), Positives = 153/321 (47%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ IG R S LA+A + + + + + + P + I+ L T GD+I ++ L GG
Sbjct: 1 MSKEVLVIGGRSSKLAVAQSTKVKELIEE--QFPQYECRIVALKTLGDQIQSKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
K ++T+E+E L ID VHS KD+PT L G +I A R D D +
Sbjct: 59 KAVWTKELEDLLYHEDAKERIDLIVHSLKDVPTLLPDGFEIGAITKRVDPSDCLVMPIDS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171
+SL DL S++GTSS+RR A L R + RG I TRL K+++ + I+L
Sbjct: 119 KYKSLDDLPNGSIVGTSSIRRSAQLKRRYPHLKFESVRGNIHTRLKKVDDPESHYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + N + GQGA+ IE + K + ++ I+ E+T
Sbjct: 179 AAAGLIRMGLESRITQTFNSTMMYHAVGQGAMGIEIREGDEKLRNILSKISDEETTVCCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVS----RNGNRCDA 285
ER+ + L+G C I S L GIV+ DG E ++ D+
Sbjct: 239 AERSLMRTLEGGCSVPIGVETKYDASKKELLLKGIVVDVDGTKAIEEQHSIIIQDSKEDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
+ G+ A+ ++ K + +
Sbjct: 299 MACGKALAEKMKQAGAKTILD 319
>gi|254488942|ref|ZP_05102147.1| porphobilinogen deaminase [Roseobacter sp. GAI101]
gi|214045811|gb|EEB86449.1| porphobilinogen deaminase [Roseobacter sp. GAI101]
Length = 297
Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats.
Identities = 123/291 (42%), Positives = 165/291 (56%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L +P I+ + GD I +R L EIGGKGLFT EIE+ L++G+
Sbjct: 1 MAQAVETRARLSAAFDLPLTAFEIVVIKVTGDMIQDRPLKEIGGKGLFTREIEEDLLAGK 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KDMPT GL + YLPRED RD F++ +L L +V+GTSSLRR+A
Sbjct: 61 IDIAVHSMKDMPTVQPGGLLLDTYLPREDPRDAFVAPLMSALDQLTEGAVVGTSSLRRRA 120
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D+ V++FRG ++TRL KL + A LA AG+ RL E V ++ D P
Sbjct: 121 QLLHKRPDLQVVEFRGNVQTRLRKLADGVAECTFLAMAGLNRLGMENVPATPIDDTDMLP 180
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QGAI IE + + L+ I+ T + ERAFL LDGSC++ IAG A G
Sbjct: 181 AVAQGAIGIERRAGDLDTEALLAAIHDTPTGQRLIAERAFLLTLDGSCETPIAGLATLDG 240
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
TL+ G VL DG R+G D +G D A+ + + N F++
Sbjct: 241 DTLHLRGEVLRPDGSEVISGDRSGPIGDGGQMGVDLARELLSQAGPNFFDW 291
>gi|161831110|ref|YP_001595911.1| porphobilinogen deaminase [Coxiella burnetii RSA 331]
gi|189028089|sp|A9N910|HEM3_COXBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|161762977|gb|ABX78619.1| porphobilinogen deaminase [Coxiella burnetii RSA 331]
Length = 307
Score = 334 bits (858), Expect = 8e-90, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 159/304 (52%), Gaps = 4/304 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK
Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L L
Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKG--ELSTL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L
Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + IA A K + ++ DG++ + GN +A IG A +
Sbjct: 239 GDCFTPIAAHAIIKNDQFSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQLLEQGG 298
Query: 302 KNVF 305
++
Sbjct: 299 DSLL 302
>gi|260220724|emb|CBA28572.1| Porphobilinogen deaminase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 312
Score = 334 bits (858), Expect = 8e-90, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 8/299 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F I TR S LAL A ++ L ++ ++ ++TKGD+I +R+L+++GGKGLF
Sbjct: 12 TFTIATRESRLALWQAEHVKALLEQSGA----SVSLLGMTTKGDQILDRSLSKVGGKGLF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL
Sbjct: 68 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E
Sbjct: 128 AVVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESR 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC
Sbjct: 188 IRAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSC 247
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNG---NRCDAINIGRDAAQYIRFI 299
+A +A G L+ ++G + +G + +A +G A+ ++
Sbjct: 248 SMPLAAYATISGDELHIRAAWGDAEGIQPVVYARASGLAKDAPEATALGEQVARDLQAA 306
>gi|94984201|ref|YP_603565.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300]
gi|123257361|sp|Q1J288|HEM3_DEIGD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94554482|gb|ABF44396.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300]
Length = 309
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 164/306 (53%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGGK 61
+ +GTR S LALA + L + + P + I +STKGDR ++L + G K
Sbjct: 2 RTVTVGTRGSALALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRDRAALQSLAQKGDK 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120
G + +EIE L++G ID AVHS KD+PT+ +GL+I++ R D RDV I + L+D
Sbjct: 60 GFWVKEIEDALLAGRIDIAVHSLKDLPTEQPEGLEIASIPKRVDARDVLIGKDGMKRLED 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSS+RRKA L +R D+ ++D RG I+TRL L AI+LA AG+ R +
Sbjct: 120 LPSGARVGTSSVRRKAFLRAYRPDLQILDLRGNIDTRLAALGTPDYDAIVLAAAGLIRTE 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E ++ + P+PGQGA+ +ET ++ + E+V I+ T D V ER FLA L
Sbjct: 180 MRHRIDEFIDPDLLLPAPGQGALALETRADDDLSIEVVYAIHDHATDDRVTAEREFLAGL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + + A K L G V A DG + +G+ + ++G + A +
Sbjct: 240 GAGCMAPVGAHATLKDGVLTLEGWVGALDGSQVIRATTSGDPAECADLGAELAADMLGQG 299
Query: 301 NKNVFN 306
+ +
Sbjct: 300 AQQLIE 305
>gi|300312229|ref|YP_003776321.1| porphobilinogen deaminase [Herbaspirillum seropedicae SmR1]
gi|300075014|gb|ADJ64413.1| porphobilinogen deaminase protein [Herbaspirillum seropedicae SmR1]
Length = 318
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R L ++ P +I I+ +T+GD+I +R L+++GGKGLF
Sbjct: 9 IVIVSRESRLAMWQAEYVRDRLAALY--PQCSISILGTTTRGDQILDRALSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + G D AVH KDMP L +G +++A L RED RD F+S+ +L +L +
Sbjct: 67 KELEVAMAEGRADLAVHCLKDMPMDLPEGFELAAILEREDPRDAFVSNDYAALDELPDGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A++ + V RG ++TRL KL+ AI+LA AG+ RL + I
Sbjct: 127 VVGTSSLRRQAMIAARYPQLVVKPLRGNLDTRLAKLDRGDYAAIILAVAGLNRLGLKARI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ PSPGQG + IE + L+ ++ E ER+ SC+
Sbjct: 187 RSFLDPAQSLPSPGQGTLAIEIPEGREDIKRLLAPLHDEPAAVVSAAERSVSRIFGASCQ 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A G L+ ++ DG G +G A+ ++ ++
Sbjct: 247 IPLAAYATLDGQRLHLRAMIATPDGLHAAAAEAEGPAAAPEALGAQVAELLKARGADDIL 306
>gi|160897675|ref|YP_001563257.1| porphobilinogen deaminase [Delftia acidovorans SPH-1]
gi|160363259|gb|ABX34872.1| porphobilinogen deaminase [Delftia acidovorans SPH-1]
Length = 312
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 153/299 (51%), Gaps = 13/299 (4%)
Query: 1 MEKKP-----FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL 55
M KP I TR S LAL A ++ L H + ++ ++TKGD+I +RTL
Sbjct: 1 MNTKPLLPHSIVIATRESQLALWQAEHVQALLRAR----GHEVELLGMTTKGDQILDRTL 56
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
+++GGKGLF +E+E L G AVHS KD+P +L +G ++ + RED RD F+S+
Sbjct: 57 SKVGGKGLFVKELEVALEEGRAHIAVHSLKDVPMELPEGFVLACVMEREDPRDAFVSNRY 116
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+L +L +V+GTSSLRR+ALL R D+ + RG + TRL KL+ AI+LA AG
Sbjct: 117 ATLAELPQGAVVGTSSLRRQALLQALRPDLKIEPLRGNVNTRLRKLDEGHYDAIVLAAAG 176
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL I+ P+ GQGA+ IE + + + + H+ TW +V ERA
Sbjct: 177 LMRLGLADRIRARFEPTGMLPAAGQGALGIEVRADRQDLIDALAPLAHQTTWLTVTAERA 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGR 290
+ GSC +A G L G++ +V + D A +G+
Sbjct: 237 VSRCMGGSCSMPLAAHGTFDGRQLRLDAAWGDPQGRLPLVQVHADATVTDFASADALGQ 295
>gi|307720830|ref|YP_003891970.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294]
gi|306978923|gb|ADN08958.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294]
Length = 319
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 169/304 (55%), Gaps = 4/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL A+ + + + P +V+ + + GD++ ++ L IGGKG
Sbjct: 2 KKLTIATRVSDLALWQAYHIKERVEVNY--PEIEVVLNKIVSNGDKVLDKPLALIGGKGH 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++++G + AVHS KD+PT + GL++ A R+D DVF+SHT +L DL
Sbjct: 60 FTKELEDEMLAGNAELAVHSLKDVPTYIPDGLELVAVTQRQDQSDVFLSHTYATLDDLPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LA+ G+ RL K
Sbjct: 120 GAVVGTTSLRRRMQLLQKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAWIGLNRLDLLK 179
Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ L+++ P GQ A+ IE +N K +E+ K +N EDT+ ER F++++
Sbjct: 180 DIPYTQKLSLDMMIPPMGQAALGIEIISDNEKVREIAKSLNDEDTFTCTQIERDFISKIG 239
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + +A A G + F ++ DG + ++ ++ N+G++ AQ +
Sbjct: 240 AGCSAPVACNAVIDGDNVVFRTMIGFPDGTNIMQKKVVKSKNESENLGKELAQKMINNGA 299
Query: 302 KNVF 305
+
Sbjct: 300 LKLL 303
>gi|229117967|ref|ZP_04247327.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3]
gi|228665416|gb|EEL20898.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3]
Length = 295
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 109/291 (37%), Positives = 156/291 (53%), Gaps = 6/291 (2%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ L + P+ + + TKGD I + TL+++GGKGLF +EIE L+ E
Sbjct: 1 MTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGLFVKEIEHALLMKE 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KDMP L +GL I R D RD FIS + S KDLA +++GTSSLRR A
Sbjct: 59 IDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKDLAEGAILGTSSLRRSA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIKEILNIEDFP 195
LL R D+ V RG I+TRL KL AI+LA AG++R+ + VI E L+
Sbjct: 119 QLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEVITEHLDETLCV 178
Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC- 254
P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C+ IAG+A
Sbjct: 179 PAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEGGCQVPIAGYATLT 238
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
K + +V + DG + + + G + +G +AA + K +
Sbjct: 239 KDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADLLIKQGAKELI 287
>gi|15838228|ref|NP_298916.1| porphobilinogen deaminase [Xylella fastidiosa 9a5c]
gi|11386846|sp|Q9PCX7|HEM3_XYLFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|9106679|gb|AAF84436.1|AE003989_13 hydroxymethylbilane synthase [Xylella fastidiosa 9a5c]
Length = 305
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRMLR--PDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + + G+V + + +GR AQ + +
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELL 301
>gi|327290907|ref|XP_003230163.1| PREDICTED: porphobilinogen deaminase-like, partial [Anolis
carolinensis]
Length = 351
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 103/291 (35%), Positives = 146/291 (50%), Gaps = 6/291 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
++ + R+GTR S LA L H P + II ++T GD+I + L++IG
Sbjct: 7 LKNQTIRVGTRKSQLARIQTDSVVEMLQKHH--PQLHFEIIGMTTTGDKILDTALSKIGE 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++
Sbjct: 65 KSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPHDAVVFHPKHVGKT 124
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGI 176
L L SVIGTSSLRR A L R + D RG + TRL KL+ AI+LA AG+
Sbjct: 125 LSSLPDKSVIGTSSLRRAAQLKRAFPQLQFKDIRGNLNTRLKKLDEKDDFSAIVLATAGL 184
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+R+ E I +IL + + GQGA+ +E + + E+V V++ +T ERAF
Sbjct: 185 RRMGWEDRIGQILTPMECLYAVGQGALAVEVRARDQEILEMVSVLHDGETVLRCIAERAF 244
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
+ L+G C +A K S LY G V + DG + N +
Sbjct: 245 MKHLEGGCSVPVAVSTTLKDSQLYLTGAVYSLDGSESLCETMQTNVKFPME 295
>gi|28199044|ref|NP_779358.1| porphobilinogen deaminase [Xylella fastidiosa Temecula1]
gi|182681767|ref|YP_001829927.1| porphobilinogen deaminase [Xylella fastidiosa M23]
gi|32129567|sp|Q87CC9|HEM3_XYLFT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059005|sp|B2I5K8|HEM3_XYLF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28057142|gb|AAO29007.1| hydroxymethylbilane synthase [Xylella fastidiosa Temecula1]
gi|182631877|gb|ACB92653.1| porphobilinogen deaminase [Xylella fastidiosa M23]
gi|307580196|gb|ADN64165.1| porphobilinogen deaminase [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 305
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRKCVIAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + + G+V + + +GR AQ + +
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELL 301
>gi|187929644|ref|YP_001900131.1| porphobilinogen deaminase [Ralstonia pickettii 12J]
gi|309781590|ref|ZP_07676324.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA]
gi|187726534|gb|ACD27699.1| porphobilinogen deaminase [Ralstonia pickettii 12J]
gi|308919565|gb|EFP65228.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA]
Length = 338
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 160/305 (52%), Gaps = 6/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 25 KLVIASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 82
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G +SA L RED RD FIS+ L L
Sbjct: 83 VKELEVALAEGRADLAVHSLKDVPMELPEGFALSAILEREDPRDAFISNDYADLASLPAG 142
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 143 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLVDR 202
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E+ P+ GQGA+ IE + + + ++ E T +V ERA L GSC
Sbjct: 203 IRSTIAPEESLPAAGQGALGIEIRADRADVRACLAPLHDEPTALAVTAERAVSRILGGSC 262
Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFIS 300
+ +A FA G TL V + DG +A +G AQ +
Sbjct: 263 QVPLASFAQWSDGGTLRLRAFVASQDGTRKLAADGEATPSTLAEADALGVRVAQQMLAGG 322
Query: 301 NKNVF 305
+++
Sbjct: 323 ARDIL 327
>gi|241663752|ref|YP_002982112.1| porphobilinogen deaminase [Ralstonia pickettii 12D]
gi|240865779|gb|ACS63440.1| porphobilinogen deaminase [Ralstonia pickettii 12D]
Length = 338
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 160/307 (52%), Gaps = 6/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 25 KLVIASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 82
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G +S L RED RD F+S+ L L
Sbjct: 83 VKELEVALAEGRADLAVHSLKDVPMQLPEGFALSTILEREDPRDAFVSNDYADLASLPAG 142
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG++RL
Sbjct: 143 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLRRLGLADR 202
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E+ P+ GQGA+ IE + + + + ++ T +V ERA L GSC
Sbjct: 203 IRSTIAPEESLPAAGQGALGIEIRADREEVRACLAPLHDAPTALAVTAERAVSRILGGSC 262
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFIS 300
+ +A FA G TL V + DG DA +G AQ +
Sbjct: 263 QVPLAAFAQWSGAGTLRLRAFVASQDGTRKLAADGEATPSTLADADALGVRVAQQMLAGG 322
Query: 301 NKNVFNF 307
+++ +
Sbjct: 323 ARDILSM 329
>gi|198284968|ref|YP_002221289.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666388|ref|YP_002427653.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|226740625|sp|B7JBH8|HEM3_ACIF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740626|sp|B5ERN6|HEM3_ACIF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|198249489|gb|ACH85082.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518601|gb|ACK79187.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 306
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 108/285 (37%), Positives = 158/285 (55%), Gaps = 4/285 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLA+ A R++L+ +H P + II ++T GD + + L +GGKGLF
Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLH--PGMAVEIITMTTSGDVLLDAPLHALGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L +D AVHS KD+P GL+I A + RED+RD F+S+T L +
Sbjct: 63 KEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+A LL + V D RG + TRL +L+ AI+LA AG+KRL I
Sbjct: 123 RVGSSSLRRRAQLLERYPHLRVEDLRGNVATRLRRLDEGHYDAIILAAAGLKRLGLPDRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+I+ P+ GQGAI IE ++ + +EL+ + DT + V ER+ L G C+
Sbjct: 183 THLLDIDRSLPAVGQGAIGIEARSDDRRTRELLAPLADADTQNCVLAERSMNQVLGGDCR 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+A A +G + G+V DG+ G+ D + +G
Sbjct: 243 LPVAALARWQGPQMLLRGLVATPDGRRVLHAEAKGS--DPVALGM 285
>gi|56685543|dbj|BAD78765.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 6301]
Length = 300
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 99/291 (34%), Positives = 148/291 (50%), Gaps = 5/291 (1%)
Query: 19 HAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78
+ L ++ P + +ST+GD I + L +IG KGLFT+E+E +++GE+D
Sbjct: 2 QTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGLFTKELEVAMLAGEVD 59
Query: 79 CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRK 135
AVHS KD+PT+L +GL + RED D + H L+ L +VIGTSSLRR
Sbjct: 60 FAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLETLPEGTVIGTSSLRRL 119
Query: 136 ALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195
A L + D RG + TRL KL+ + A++LA AG++RL I +++
Sbjct: 120 AQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRIHQLIPAAVSL 179
Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
+ GQGA+ IE +P+ EL+K + HE T ERAFL EL+G C+ I
Sbjct: 180 HAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLRELEGGCQVPIGVNTAIA 239
Query: 256 GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
TL G+V + DG+ +G D +G A ++ K + +
Sbjct: 240 DGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQGAKEILD 290
>gi|115352519|ref|YP_774358.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD]
gi|122322497|sp|Q0BCU9|HEM3_BURCM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115282507|gb|ABI88024.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD]
Length = 328
Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 131 AVVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 191 IRTLIDVEDSPPAAGQGALGIEIATHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DG+ G DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGA 310
Query: 302 KNVFN 306
++ N
Sbjct: 311 LDIVN 315
>gi|291277466|ref|YP_003517238.1| porphobilinogen deaminase [Helicobacter mustelae 12198]
gi|290964660|emb|CBG40515.1| porphobilinogen deaminase [Helicobacter mustelae 12198]
Length = 315
Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 105/311 (33%), Positives = 156/311 (50%), Gaps = 9/311 (2%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M K + IGTR S LAL A L + + T+GDR+ + L +I
Sbjct: 1 MSKQNRQIIIGTRGSALALWQAEYIAMRLKKEL---GIESRLQIVKTQGDRMLDVPLAKI 57
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+EK L+ +ID AVHS KD+P + ++GL ++ RED+RD F+S S+
Sbjct: 58 GGKGLFTKELEKLLLQEKIDIAVHSLKDVPVEFVEGLDLACITKREDVRDCFLSVRYASI 117
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL + +GT+SLRR L R D+ RG ++TRL +L + + AI+LA AG+ R
Sbjct: 118 LDLPPGARVGTTSLRRSMQLKILRKDLDTQSLRGNVQTRLKRLFDGEFDAIILAQAGLNR 177
Query: 179 LKKEKVIKEILNI---EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
L ++ L E+ P+ GQGA+ IE + L++ +N E T N ER
Sbjct: 178 LGIDQQKVPFLKPFSTEELIPAMGQGALGIEAREGDG-IFSLLQGLNDEATAICTNAERT 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
F+ LDG C+ I A C + I+ DG S +G+ D+I + + A+
Sbjct: 237 FIRVLDGGCQVPIGVHAQCNNQDFVIHAILGLPDGSKVLRDSISGSTKDSILLAENLAER 296
Query: 296 IRFISNKNVFN 306
+
Sbjct: 297 FLSQGALEILE 307
>gi|258511805|ref|YP_003185239.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478531|gb|ACV58850.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 305
Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 113/302 (37%), Positives = 160/302 (52%), Gaps = 4/302 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+ TR S LAL L V ++P+ T+GD I +R L+E+GGKGL
Sbjct: 2 RTLRVATRRSALALTQTNHVVDLLKQVAH--GVEFELVPIRTRGDEIVDRALSEVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +IE L +G+ D AVHS KD+P +L GL I A PRED RD IS T Q L DL
Sbjct: 60 FVADIEDALATGQADLAVHSLKDVPFELRDGLTIGAVPPREDPRDALISRTGQGLFDLPP 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A L R R D+ V RG ++TRL +L + AI+LA +G+ RL +
Sbjct: 120 GARVGTSSLRRQAALRRLRPDLCVETLRGNVDTRLRRLEEGQFDAIVLAASGLHRLGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+GS
Sbjct: 180 RITEYLPVDRFVPAVGQGALAIECRAEDDEVMRHLAAIADPDATRAVEAERAFLSRLEGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I +A G L V G ++ R G+ +A +G A+ + ++
Sbjct: 240 CQVPIGAYAEPVGHELRLIAFVADPSGIHHLQLERTGD--EARALGVAMAEEMLRQGAED 297
Query: 304 VF 305
Sbjct: 298 WL 299
>gi|297183175|gb|ADI19316.1| porphobilinogen deaminase [uncultured delta proteobacterium
HF0500_03A04]
Length = 315
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 4/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A +S + H P + ++ + TKGDRI +R L+++GGKGLF
Sbjct: 5 LRIATRGSRLALWQANWVKSQIEQNH--PGQTVELVIVQTKGDRIQDRPLSQVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L D AVHS KD+ ++ +GL + RED RD ++ S +L +
Sbjct: 63 KELEGSLFREAADLAVHSLKDVTGEVPEGLALPVVTAREDFRDALVAPRHGSFCELPSGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR A LL R D+ RG +ETRLNK+++ A LLA AG+KRL+ E I
Sbjct: 123 VVGTSSLRRAAQLLHLRPDLETQPIRGNVETRLNKVDSGAFDATLLAVAGLKRLELELRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ E P+ GQG + +E ++P EL++ + + T ER L L+G+C+
Sbjct: 183 TEVFPPEMLLPALGQGVLGLEIRADDPATLELIQPLQDKTTALCCQAERRLLERLEGNCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNGNRCDAINIGRDAAQYIRFISNKN 303
+AG G L G +LA DG+ E A +G + A I +
Sbjct: 243 VPLAGLCERCGERLLLRGQLLAPDGQQVVEHKAESAATPEAARALGDEVANAILNSGGRE 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|283780135|ref|YP_003370890.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068]
gi|283438588|gb|ADB17030.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068]
Length = 311
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 175/306 (57%), Gaps = 5/306 (1%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P R+GTR SPLA A R L+ ++ +I ++T+GD+ T++ L +IG
Sbjct: 1 MSDAPKLRLGTRASPLARWQADWVRDQLIAA----GIDVEMILITTEGDQQTSQPLGQIG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G+GLFT+EI+++L++G+ID AVHS KD+PT + GL ++A RED D+ I SL
Sbjct: 57 GQGLFTKEIQRRLLAGDIDLAVHSLKDLPTLPIDGLSLAAVPEREDTADILIGPAGTSLA 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + IGT SLRRKA LL R+D+ ++D RG ++TRL KL+ + HAI+LA AG+KRL
Sbjct: 117 TLPSGAKIGTGSLRRKAQLLHARADLEILDIRGNVDTRLRKLDEGQYHAIILAAAGLKRL 176
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K + + E L P+ GQGA+ IE+ ++P ++L+ ++H T +V ER+ LA
Sbjct: 177 KLDDRMTERLEAPLMLPAVGQGALGIESRSDDPTTRKLLAPLSHAPTLQAVIAERSLLAA 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L C + + A L +VL+ DG+ S DA +G + A+ +R
Sbjct: 237 LRAGCLAPVGAHAQVVDGQLTLAAVVLSIDGQSRLFASLTSAPADAAQLGEEVAELLRQQ 296
Query: 300 SNKNVF 305
+
Sbjct: 297 GATELL 302
>gi|254467792|ref|ZP_05081198.1| porphobilinogen deaminase [beta proteobacterium KB13]
gi|207086602|gb|EDZ63885.1| porphobilinogen deaminase [beta proteobacterium KB13]
Length = 292
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 2/291 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A + + K P + ++ T+GD I ++ L EIGGKGLF +E+E L++ +
Sbjct: 1 MWQANYIADRIRE--KYPDTEVNVLSFKTQGDIILDQPLAEIGGKGLFIKELEHALLNDD 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L + +I A RE+ D FIS+ SL DL +VIGTSSLRR++
Sbjct: 59 ADLAVHSMKDVPMDLPEPFEICAISERENPSDAFISNKYASLDDLPQDAVIGTSSLRRQS 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L+ R D+ + RG ++TRL KL++ AI+LA AG+ RL E IK L+++ + P
Sbjct: 119 LIKHTRPDLIIESLRGNLQTRLKKLDSGIYDAIILASAGLIRLNLENRIKSTLDVKQYIP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
S GQGA+ IE N + +E + +N E T V ER L GSC + A K
Sbjct: 179 SVGQGALGIEILKNKSEVKEFLDFLNDEQTQIQVEAERKISKTLAGSCTVPMGAHASIKN 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
+ L V + DG + G + +++ + AQ + KN+
Sbjct: 239 NLLTIQAFVSSPDGIKMIRATDTGPCSEHLSLANNVAQSLIDQGAKNILGL 289
>gi|323489960|ref|ZP_08095181.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2]
gi|323396256|gb|EGA89081.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2]
Length = 309
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 169/304 (55%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L P I + TKGDRI + L+++GGKGL
Sbjct: 2 RKIIVGSRRSKLALTQTNQFIDKLKAAGA--PFEFEIKEIVTKGDRIVDVMLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L EID AVHS KDMP+ L +GL I RED RD +I++ L DL +
Sbjct: 60 FVKEIEQALFDREIDFAVHSMKDMPSVLPEGLAIGCIPEREDPRDAYIANDHVKLLDLPV 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+V+GTSSLRR + LL R D+ + RG I+TRL KL + AI+LA AG+KR+ +
Sbjct: 120 GAVVGTSSLRRSSQLLLLRPDLDIQWIRGNIDTRLAKLKSGDFDAIILAAAGLKRMGWKD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ E L +++ P+ GQG++ IE + + + +NHEDT +VN ER FL ++DG
Sbjct: 180 DLVTEFLEVDECLPAIGQGSLGIECREEDTELLSELAKLNHEDTALAVNAERKFLKDMDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC+ IAG+A K + F G++ + + + + D I GR A+ I
Sbjct: 240 SCQVPIAGYATVKDGEVTFTGLISSPEADQVFKEMAISH--DPIEAGRIVAEKISAQGGY 297
Query: 303 NVFN 306
++
Sbjct: 298 DLIQ 301
>gi|302896420|ref|XP_003047090.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728018|gb|EEU41377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 334
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 153/317 (48%), Gaps = 15/317 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +GTR SPLALA +L + P H I ++T GDR N L GGKG
Sbjct: 7 KNVINVGTRKSPLALAQTNIVVDALKA--QFPDHEFPIHGMTTTGDRDQNTALYNFGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTA 115
L+T ++E++L++ E+D VHS KDMPT L +G + RED RD + H
Sbjct: 65 LWTSQLEERLVNKELDLVVHSLKDMPTSLPEGCVLGCVTSREDPRDTLVIKKSLQEKHGW 124
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYA 174
++L DL S+IGTSS+RR A L+R + D RG I+TRL KL ++ + I+LA A
Sbjct: 125 KTLADLPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLQKLEDDPELTGIILAAA 184
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G++R+ I + L + + GQGA+ +E ++ K + +K I +E T +
Sbjct: 185 GLQRMDLGHHISQFLESDTGGILHAVGQGALGVECRADDEKVLKFLKTIENEQTMLACEA 244
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIG 289
ERA + L+G C I L V++ G + +A G
Sbjct: 245 ERAVMRALEGGCSVPIGVETKWVDGKLRLRATVVSLRGDEGVDAEMTEEIKTQEEADTFG 304
Query: 290 RDAAQYIRFISNKNVFN 306
+ A+++ + +
Sbjct: 305 KKVAKHLVDQGAGKILD 321
>gi|328768210|gb|EGF78257.1| hypothetical protein BATDEDRAFT_17445 [Batrachochytrium
dendrobatidis JAM81]
Length = 342
Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats.
Identities = 109/324 (33%), Positives = 155/324 (47%), Gaps = 21/324 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LA+ ++ L + P I ++T GD++ + L++IG K
Sbjct: 16 SKTNFTIGTRESQLAMIQTTHVQALLKQ--QYPQLTFDINGMTTTGDQVQDVALSKIGTK 73
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
LFT+E+E L +D VHS KD+PT+L G+ + A L RE DV I H+ L
Sbjct: 74 SLFTKELEMALDDHSVDFVVHSLKDLPTQLPSGMMVGAILEREQPNDVVIMSLKHSFTGL 133
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
L S+IGTSS+RR A L R ++ D RG + TRL KL++ + AILLAYAGI
Sbjct: 134 AQLPAGSIIGTSSVRRSAQLKRRFPNLVFQDIRGNLNTRLKKLDDPASPFAAILLAYAGI 193
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I EIL + GQGAI IE N+ + L+ +NH T ER+F
Sbjct: 194 HRMGWTDRITEILPTVTILHAVGQGAIGIECRENDTCVRSLLAPLNHTPTRIRCTAERSF 253
Query: 237 LAELDGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHE--VSRNGNRCD----- 284
+ L+G C + + L G V + DG I +S + + D
Sbjct: 254 MRSLEGGCSVPLGVSTSIEPNDTGIDVLCLTGSVTSLDGSIELRHAMSMDLDSEDIEEKV 313
Query: 285 --AINIGRDAAQYIRFISNKNVFN 306
A +G A + K+V +
Sbjct: 314 TMAHKLGTALANVLIERGAKDVLD 337
>gi|260574199|ref|ZP_05842204.1| porphobilinogen deaminase [Rhodobacter sp. SW2]
gi|259023665|gb|EEW26956.1| porphobilinogen deaminase [Rhodobacter sp. SW2]
Length = 314
Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats.
Identities = 130/303 (42%), Positives = 180/303 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLAL A ETR SLM +P I+ + GD++ +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALWQAHETRRSLMAAFSLPEAAFEIVVIKVTGDQVQDRALKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE L+ G ID AVHS KDMPT +GL + YLPRED+RD F+S T L DL
Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPTLQPEGLLLDCYLPREDVRDAFVSPTVARLADLPHG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL V
Sbjct: 131 ATVGSSSLRRRAQLAARRPDLNLVEFRGNVQTRMKKLEDGVAVATFLAMAGLNRLGMAHV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + +E+ P+ QGAI IE +P+A+ L+ I+H T + CERA+L ELDGSC
Sbjct: 191 ARSAIEVEEMLPAVAQGAIGIERRTADPRAEALLAGIHHGPTGIRLACERAYLQELDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG + +G ++ G +L DG DA GRD A+ + + +
Sbjct: 251 ATPIAGMSVLEGDRIWLRGEILRPDGSEVIAGEIRAAASDAAEAGRDLARQLLGRAPEGF 310
Query: 305 FNF 307
F++
Sbjct: 311 FSW 313
>gi|56698469|ref|YP_168844.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
gi|56680206|gb|AAV96872.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
Length = 319
Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats.
Identities = 134/307 (43%), Positives = 188/307 (61%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L +P I+ +ST GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRHRLGAAFDLPEDAFEIVVISTTGDNRAMIEADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G+ID AVHS KDMP + GL + +LPRED+RD FIS +++D
Sbjct: 71 KGLFTKEIEEAMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L +V+GTSSLRRKA LL R D+ V++FRG ++TRL KL+ A LA AGI+RL
Sbjct: 131 LPLGAVVGTSSLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLN 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+V ++ +D P+ QGAI IE +++ +A E++ I+H +T + ERA LA L
Sbjct: 191 MAEVPATAISPDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+TL G VL DG + R+G+ D +G + A+ + +
Sbjct: 251 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAITLDRSGDVADGPALGTEMARELLAQA 310
Query: 301 NKNVFNF 307
F++
Sbjct: 311 GPGFFDW 317
>gi|161702955|ref|YP_369990.2| porphobilinogen deaminase [Burkholderia sp. 383]
Length = 334
Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNVFN 306
++
Sbjct: 316 LDIVQ 320
>gi|253680789|ref|ZP_04861592.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873]
gi|253562638|gb|EES92084.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873]
Length = 300
Score = 331 bits (850), Expect = 7e-89, Method: Composition-based stats.
Identities = 107/297 (36%), Positives = 154/297 (51%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + P N I +STKGDRI + L +IGGKGLF
Sbjct: 3 IVVGSRGSKLALTQTNWVIDKIKQ--NNPQLNFEIKIISTKGDRIQHMLLDKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124
+EIE++LISG+ID AVHS KDM T + + L+ S RED RDV I + +S+ +L
Sbjct: 61 QEIEEQLISGQIDLAVHSMKDMSTDIPEELKFSYVPIREDYRDVLILNKKYKSIDELPKG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT S RRK LL +R+D+ V+ RG ++TR+ K+ I+LA AGIKRL E
Sbjct: 121 AKIGTGSKRRKYQLLDYRTDLKVVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLEDK 180
Query: 185 IKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I L + PSP QG + +E + ++K I H+ + ERAFL ++
Sbjct: 181 IDYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEHKASTIQAEAERAFLKGVN 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C I +T+ G++ DG + G+ +A +G + A+ I
Sbjct: 241 GGCHVPIGALCNINKNTIEVTGLLGKEDGSKIIRKTLVGSIDEAEYVGYELAKIILK 297
>gi|224437777|ref|ZP_03658724.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
gi|313144223|ref|ZP_07806416.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
gi|313129254|gb|EFR46871.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
Length = 323
Score = 331 bits (850), Expect = 7e-89, Method: Composition-based stats.
Identities = 107/312 (34%), Positives = 170/312 (54%), Gaps = 14/312 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IGTR S LAL A ++ L D + + + T+GD+I + L +IGGKGL
Sbjct: 7 RKLIIGTRGSALALWQAQYVKNRLKDECR---LDSEFKIIKTQGDKILDVPLAKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+KL+ EID AVHS KD+P ++L L ++A RED RD F+S +SL+ L+
Sbjct: 64 FTKELEQKLLDKEIDLAVHSLKDVPVEILPLLDLAAITEREDCRDCFLSMKYESLESLSQ 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR + +R+D+ + RG I+TRL KL N AI+LA AG+KRL +
Sbjct: 124 GARVGTTSLRRSMQIKAFRADLDTLSLRGNIQTRLEKLKNGVFDAIILAQAGVKRLGIDV 183
Query: 184 VI-----KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
I+ ++ P+ GQGA+ IE ++P E + + H+ + V+ ER+F+
Sbjct: 184 KKNDMGICHIVPLDFMIPAMGQGALGIEMRKDSPYF-ETISRLTHKRSALCVSAERSFVR 242
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-----NRCDAINIGRDAA 293
EL+G C+ I A + L +V +G+ + S ++ A ++G++ A
Sbjct: 243 ELEGGCQVPIGVQAMYENGILRLRAMVGLPNGQEILQESLEDSILEEDKAKAESLGKNLA 302
Query: 294 QYIRFISNKNVF 305
Q K +
Sbjct: 303 QSFIAKGAKEIL 314
>gi|162218053|ref|YP_621689.2| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054]
Length = 334
Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNVFN 306
++
Sbjct: 316 LDIVQ 320
>gi|264679667|ref|YP_003279574.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2]
gi|262210180|gb|ACY34278.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2]
Length = 314
Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats.
Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 8/289 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF
Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +
Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I
Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 187 RARFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGR 290
+A + +G TL+ +G V + D A +G
Sbjct: 247 MPLAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQASAQVTDFASANALGE 295
>gi|295675858|ref|YP_003604382.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002]
gi|295435701|gb|ADG14871.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002]
Length = 332
Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 162/304 (53%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNQYDSLAALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 130 AVVGTSSLRREAMLRMRYPHLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLADR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+ +A +A L+ GIV DG+ + A+ +G + AQ +
Sbjct: 250 EVPLAAYATWGDGALHLRGIVATPDGQRVLSAQASAPAPTVERALALGEEVAQSLAQQGA 309
Query: 302 KNVF 305
+
Sbjct: 310 LEIV 313
>gi|296274257|ref|YP_003656888.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299]
gi|296098431|gb|ADG94381.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299]
Length = 312
Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 6/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + ++ L + P I + STK D+I + L +IGGKGL
Sbjct: 2 KKIVIATRKSKLALWQSEYIKAEL--LKHYPDMVIELKTFSTKADKILDVPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E L + E D AVHS KD+P + +G ++A R D RD F+S S+ DL
Sbjct: 60 FTKELEIALENKEADIAVHSLKDVPVEFEEGFVLAALTKRFDPRDAFLSEKYASITDLPN 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++IGT+SLRR+ L R DI + D RG I TR+ KL + AI+LA G+++L+ E
Sbjct: 120 GAIIGTTSLRRRMELKLLRPDIELKDLRGNINTRIAKLKAGEYDAIILAATGVQKLQIED 179
Query: 184 VIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K I++ PS GQ + IET ++NP+ E++ V++ ++ ER+F+ L+
Sbjct: 180 EVKYFTPISIDEMIPSMGQATLGIET-LDNPELVEILSVLHDKNAEIESTIERSFVHTLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I A +++ IV DG + + N D G+ AQ
Sbjct: 239 GGCQVPIGVKATILDENSVDVRAIVGMPDGSEYVQEDIKINIDDYKTAGQALAQTFIDQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKELLE 304
>gi|209516094|ref|ZP_03264954.1| porphobilinogen deaminase [Burkholderia sp. H160]
gi|209503554|gb|EEA03550.1| porphobilinogen deaminase [Burkholderia sp. H160]
Length = 332
Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 162/304 (53%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P + I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCEVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFVLSTIMEREDPRDALVSNQYDSLAALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L ++ V RG ++TR+ KL+ AI+LA AG+KRL
Sbjct: 130 AVVGTSSLRREAMLRMRYPNLDVRPLRGNLDTRVAKLDRGDYAAIILAAAGLKRLGLADR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+ +A +A L+ GIV DG+ + A+ +G + A +
Sbjct: 250 EVPLAAYATWGDGALHLRGIVATPDGQRVLSAQASAPAPTLERALALGEEVAHSLVQQGA 309
Query: 302 KNVF 305
++
Sbjct: 310 LDIV 313
>gi|77967966|gb|ABB09346.1| Porphobilinogen deaminase [Burkholderia sp. 383]
Length = 378
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 62 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLF 119
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 120 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 179
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 180 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETR 239
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 240 IRALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 299
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 300 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 359
Query: 302 KNVFN 306
++
Sbjct: 360 LDIVQ 364
>gi|187923070|ref|YP_001894712.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN]
gi|238058734|sp|B2T1D1|HEM3_BURPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|187714264|gb|ACD15488.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN]
Length = 342
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 166/304 (54%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL+KL+ AI+LA AG+KRL +
Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGER 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+ +A +A + L+ GIV DG+ + A+ +G++ A +
Sbjct: 250 EVPLAAYATWRDGALHLRGIVATPDGQRVLSAQASAPAPSVERAVALGQEVASALEQQGA 309
Query: 302 KNVF 305
++
Sbjct: 310 MDIV 313
>gi|328949818|ref|YP_004367153.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884]
gi|328450142|gb|AEB11043.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884]
Length = 305
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 158/305 (51%), Gaps = 9/305 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LAL L + + P I + T+GDR + +
Sbjct: 2 RVIVVGTRGSALALTQTRWVVERLKE--QWPEAEFKIKTIQTRGDRG-----APPTDRDI 54
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122
F +E+E+ L+ GEID AVHS KD+PT+ +GL I++ R D RDVFI + L+DL
Sbjct: 55 FVKELEEALLRGEIDIAVHSLKDLPTEQPEGLVIASIPKRVDPRDVFIGRNGIRRLEDLP 114
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSS+RRKA LL +R D+ V + RG ++TRL+ L + + I+LA AG+ RL
Sbjct: 115 EGAVVGTSSVRRKAQLLAYRPDLVVRELRGNVDTRLSALGSGEFDGIILAAAGLLRLDLR 174
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++ + P+PGQGA+ +E + A EL I+H T D ER+FL L
Sbjct: 175 NRIDAFIDPKIMLPAPGQGALALEVREGDDIADELAYSIHHHPTDDRTTAERSFLHHLGA 234
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + A+ + TL G+V+A DG G+ +A +G + A+ I
Sbjct: 235 GCLAPVGALAHVEEDGTLRLEGVVVAPDGSSMIHGEIEGDAEEAWELGAELARDILEQGG 294
Query: 302 KNVFN 306
K +
Sbjct: 295 KRILE 299
>gi|121595211|ref|YP_987107.1| porphobilinogen deaminase [Acidovorax sp. JS42]
gi|120607291|gb|ABM43031.1| porphobilinogen deaminase [Acidovorax sp. JS42]
Length = 320
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 155/300 (51%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A +S L H + ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 21 IVIATRESQLALWQAEHVQSLLRAR----GHAVALLGMTTRGDQILDRTLSKVGGKGLFV 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L +
Sbjct: 77 KELEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGA 136
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I
Sbjct: 137 VVGTSSLRRQALLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERI 196
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC
Sbjct: 197 RAVFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCS 256
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+A G TL ++ A +G A +R
Sbjct: 257 MPLAAHGQWDGDTLSLRAAWGDVAARVPLVRAEGAAPVHTLEQADALGLAVAAQLRTAGA 316
>gi|222111550|ref|YP_002553814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY]
gi|221730994|gb|ACM33814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY]
Length = 310
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A +S L H + ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 11 IVIATRESQLALWQAEHVQSLLRAR----GHAVALLGMTTRGDQILDRTLSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L +
Sbjct: 67 KELEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I
Sbjct: 127 VVGTSSLRRQVLLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC
Sbjct: 187 RAVFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCS 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+A G TL ++ A +G A +R
Sbjct: 247 MPLAAHGQWDGDTLSLRAAWGDVAARVPLVRAEGAAPVHTLEQADALGLAVAAQLRTAGA 306
>gi|170733765|ref|YP_001765712.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3]
gi|238058731|sp|B1JWR0|HEM3_BURCC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169817007|gb|ACA91590.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3]
Length = 334
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNVFN 306
++
Sbjct: 316 LDIVQ 320
>gi|161524048|ref|YP_001579060.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
gi|160341477|gb|ABX14563.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
Length = 402
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 87 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 144
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 145 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 204
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 205 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 264
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC
Sbjct: 265 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 324
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V DG + DA+ +GR + +
Sbjct: 325 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 384
Query: 302 KNVF 305
+
Sbjct: 385 LEIV 388
>gi|134296607|ref|YP_001120342.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4]
gi|166201499|sp|A4JGV4|HEM3_BURVG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134139764|gb|ABO55507.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4]
Length = 333
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFALAAIMAREDARDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++++ED P+ GQGA+ IE + + + ++ T +V ER L GSC
Sbjct: 196 IRALIDVEDSLPAAGQGALGIEIAAHRSDVAQWLAPLHDPHTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DG+ G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGRRVLSAQACGAVMTAADALALGRAVSDELDAQGA 315
Query: 302 KNVFN 306
+++ N
Sbjct: 316 RDIVN 320
>gi|320101752|ref|YP_004177343.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644]
gi|319749034|gb|ADV60794.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644]
Length = 332
Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 3/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIGTR SPLA A + L D P + ++ + T GDR N L IGG
Sbjct: 15 SHRRVRIGTRGSPLARWQAEWVAARLRDA--WPGLTVELVEIKTLGDRDRNSPLASIGGA 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+EI++ L+ ++ AVHS KD+PT+ ++GL + A PRE+ RD I+ L+ L
Sbjct: 73 GLFTKEIQRALLDCRVEIAVHSLKDLPTQPVEGLILGAVPPREEPRDALIAPAHGLLEHL 132
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT SLRR+A LL R D+ V+ RG +ETRLN + A+LLA AG++RL
Sbjct: 133 PAAARVGTGSLRRRAQLLWMRPDLEVVGVRGNVETRLNHALEGRLDAVLLAVAGLRRLGL 192
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + L DF P+ GQGA+ IE ++P L+ ++ + SV ERA LA+L+
Sbjct: 193 DSAITQTLGPPDFLPAVGQGALGIECRGDDPDTLALLAPLDDPASRASVLAERALLADLE 252
Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + + + L VL G+ +G D +G A +R
Sbjct: 253 AGCMVPLGAWGRSEADGLLALDAAVLDPAGRQRLAAHASGPANDPQTLGLAVAAELRRQG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEALL 317
>gi|254247511|ref|ZP_04940832.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184]
gi|124872287|gb|EAY64003.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184]
Length = 334
Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLASLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNVFN 306
++
Sbjct: 316 LDIVQ 320
>gi|152992229|ref|YP_001357950.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1]
gi|166217789|sp|A6Q7Y4|HEM3_SULNB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151424090|dbj|BAF71593.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1]
Length = 323
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 10/312 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A+ + + P + + +++KGD+I ++ L +GG
Sbjct: 1 MEK--LVIATRASNLALWQAYHIKERIETA--FPEVRVELNEITSKGDKILDKPLALVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG FT+E+E ++I+G AVHS KD+PT + +GL++ A R+D DVF+SHT +SL +
Sbjct: 57 KGHFTKELEDEMIAGNAHLAVHSLKDVPTYIPEGLELCAITERQDQSDVFLSHTYKSLSE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+ LL R D+ V D RG + TRL KL + AI+LAY G+ RL
Sbjct: 117 LPEGAVVGTTSLRRRMQLLEKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAYIGLYRLD 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I + ++ F P GQ A+ IE NN + +E+ +NHE T+ ER F++ +
Sbjct: 177 LLKDIPYVEKLDFFIPPMGQAALGIEIVANNDRIREIAMTLNHEPTFICTKVERDFISVI 236
Query: 241 DGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C + +A A T+ ++ DG S +A +G + AQ
Sbjct: 237 GAGCSAPVAVNATMDKKEDDKVPTISVRAMIGYPDGTHILHKSLTVPLNEADILGDELAQ 296
Query: 295 YIRFISNKNVFN 306
+ ++
Sbjct: 297 AMIEEGALDILE 308
>gi|218295973|ref|ZP_03496753.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23]
gi|218243711|gb|EED10239.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23]
Length = 303
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 106/302 (35%), Positives = 156/302 (51%), Gaps = 8/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LALA L + P + + T+GD + I
Sbjct: 2 RVIVVGTRGSALALAQTRWVVERLKE--SWPEAEFKVKTIRTRGDGGADPREQAI----- 54
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+++ L++ EID AVHS KD+PT+ KGL+I+A R+D RD F+ + L+DL
Sbjct: 55 FVKELQEALLAREIDIAVHSLKDLPTEEPKGLKIAAIPRRQDPRDAFLGKAFKRLEDLPP 114
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSS+RRKA +L R D+ V D RG ++TRL L + AI+LA AG+ RL
Sbjct: 115 GAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGGGEYDAIILAAAGLIRLDLRN 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L
Sbjct: 175 RIDQFLEPEVMLPAPGQGALALEVRQGDDLAEELSYALHHHASHDRVRAERAFLRGLGAG 234
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + + A + TL G + A DGK F G +A +G + A+ I +
Sbjct: 235 CLAPVGALAQVGEDGTLVLEGGIFAPDGKSFIRAEIEGEASEAEELGLELARDILEQGGR 294
Query: 303 NV 304
+
Sbjct: 295 EI 296
>gi|331270186|ref|YP_004396678.1| porphobilinogen deaminase [Clostridium botulinum BKT015925]
gi|329126736|gb|AEB76681.1| porphobilinogen deaminase [Clostridium botulinum BKT015925]
Length = 300
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 105/298 (35%), Positives = 153/298 (51%), Gaps = 6/298 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL + + H P N I +STKGDRI + L +IGGKGLF
Sbjct: 2 KIIVGSRGSKLALTQTNWVIDKIKENH--PQVNFEIKIISTKGDRIQHMPLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123
+EIE++LI+G+ID AVHS KDM T + + L+ S RED RDV I + +S+ +L
Sbjct: 60 VQEIEEQLINGQIDLAVHSMKDMSTDIPEELKFSYVPVREDYRDVLILNKKYKSIDELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT S RRK LL +R+D+ ++ RG ++TR+ K+ I+LA AGIKRL E
Sbjct: 120 GAKIGTGSKRRKYQLLDYRNDLKIVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLED 179
Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I L + PSP QG + +E + ++K I E + ERAFL +
Sbjct: 180 KIDYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEDEISTIQAEAERAFLKGV 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C I T+ G++ D + G+ +A IG + A+ +
Sbjct: 240 NGGCHVPIGALCSINKDTVEVTGLLGKEDASKIVRKTLVGSIDEAEYIGYELAKIVLK 297
>gi|319760696|ref|YP_004124634.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF]
gi|318039410|gb|ADV33960.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF]
Length = 310
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR S LA+ + + L H P I ++P+ T GD+ N T
Sbjct: 1 MNTKFLRIATRKSRLAICQSEYVCNELKRFH--PNIKIKLVPIVTTGDKFFNSTTKIKIK 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG F +E+E LI D AVHS KDM L L + R D RD F+S ++
Sbjct: 59 KGAFIKELEYALIENRADIAVHSMKDMTASLPNELILPILCKRIDPRDAFVSIKYSNIDM 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S+IGTSSLRR+ + RSD+++ + RG I+TR+ KL+ K AI+LA AG+ RL
Sbjct: 119 LPSGSIIGTSSLRRQCQIQARRSDLTLHNLRGNIDTRIKKLHQGKYDAIILAVAGLNRLH 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IK +N +D P+ GQGAI IE + L+ + H++T + ERA L
Sbjct: 179 LTQYIKTYINPKDLLPAMGQGAIAIECRKKDIDTLSLLSPLYHQETSLRIQSERAVTTYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA ++ ++ ++ DG A +G A+ +
Sbjct: 239 EGYCQFPIASYSEIHNHQIWLRALIGLPDGSKIIRTEGRAPFDQAEKLGLFLAKKLLNQ 297
>gi|206560969|ref|YP_002231734.1| porphobilinogen deaminase [Burkholderia cenocepacia J2315]
gi|238058732|sp|B4E8C4|HEM3_BURCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|198037011|emb|CAR52932.1| putative porphobilinogen deaminase protein [Burkholderia
cenocepacia J2315]
Length = 334
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFALAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPRTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVMTVADALALGRAVSDELEAQGA 315
Query: 302 KNVFN 306
++
Sbjct: 316 LDIVQ 320
>gi|218290821|ref|ZP_03494890.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1]
gi|218239179|gb|EED06380.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1]
Length = 305
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 113/303 (37%), Positives = 159/303 (52%), Gaps = 4/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+ TR S LAL L V I ++P+ T+GD I +R L+E+GGKGL
Sbjct: 2 RILRVATRRSALALTQTNHVVDLLKRV--IHDLKFELVPIRTRGDEIVDRALSEVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +IE L +G D AVHS KD+P +L GL I A RED RD IS T Q L DL
Sbjct: 60 FVADIEDALATGRADLAVHSLKDVPFELRDGLTIGAVPRREDPRDALISRTGQGLFDLPP 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A L R R D+ V RG ++TR+ +L + AI+LA +G+ RL +
Sbjct: 120 GARVGTSSLRRQAALRRLRPDLRVDTLRGNVDTRIRRLEEGQFDAIVLAASGLHRLGLAE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+GS
Sbjct: 180 KITEYLPVDRFVPAVGQGALAIECRAEDDEVLRYLGAIADPDATRAVEAERAFLSRLEGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I +A G L V G + ++ R G+ DA +G A+ + +
Sbjct: 240 CQVPIGAYAEPVGHELRLIAFVADPSGARYLQLERTGS--DARALGVAVAEEMLRQGAET 297
Query: 304 VFN 306
Sbjct: 298 WLE 300
>gi|300703401|ref|YP_003745003.1| hydroxymethylbilane synthase [Ralstonia solanacearum CFBP2957]
gi|299071064|emb|CBJ42373.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum CFBP2957]
Length = 334
Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 160/304 (52%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 22 LVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFV 79
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L G + A L RED RD F+S+ L L +
Sbjct: 80 KELEVALAEGRADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGA 139
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL + I
Sbjct: 140 VVGTSSLRREASLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERI 199
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ + P+ GQGA+ IET + Q + ++H T +V ERA L GSC+
Sbjct: 200 RAVIASDVSLPAAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQ 259
Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+A FA+ L V + DG+ +A +G AQ +
Sbjct: 260 VPLAAFAHWTDAGALRLRAFVASQDGRRKLAAEGEATPATLAEAEALGAHVAQQMLDGGA 319
Query: 302 KNVF 305
+++
Sbjct: 320 RDIL 323
>gi|320335860|ref|YP_004172571.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211]
gi|319757149|gb|ADV68906.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211]
Length = 313
Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats.
Identities = 111/307 (36%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGG 60
+ +GTR S LALA + L + + P I +STKGDR + TL + G
Sbjct: 5 SRSITVGTRGSALALAQTRWVVARLKE--EWPDTEFRIQTISTKGDRDRSSLETLAQKGD 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLK 119
KG + +EIE L+S ID AVHS KD+PT +GL+IS+ R + RD I + L
Sbjct: 63 KGFWVKEIEDALLSSRIDIAVHSLKDLPTAQPEGLEISSIPKRVEARDALIGKEGMKRLV 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + IGTSS+RRKA L +R D+ V D RG ++TRL L N+ AI+LA AG+ RL
Sbjct: 123 DLPQGARIGTSSVRRKAFLRAFRPDLDVKDLRGNVDTRLAALAGNEYDAIILAAAGLTRL 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I E+++ + P+PGQGA+ +ET ++ A E+ I+ T D ER FLA
Sbjct: 183 EMRNRIDELVDPDILLPAPGQGALALETRSDDDLAVEVAYAIHDRATDDRTTAEREFLAG 242
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L C + + A KG L G V A DG + G+ + ++G A+ +
Sbjct: 243 LGAGCMAPVGALATLKGGVLTLEGWVGALDGTQVIRATIEGDADECADLGAQLAEDMLAQ 302
Query: 300 SNKNVFN 306
+ + +
Sbjct: 303 GAQALID 309
>gi|167585805|ref|ZP_02378193.1| porphobilinogen deaminase [Burkholderia ubonensis Bu]
Length = 328
Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 164/304 (53%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 131 AVVGTSSLRREAMLRARYPHLQVQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ ++D PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 191 IRALIGVDDSPPAAGQGALGIEIASHRADVAAWLAPLHDHATALAVEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK + DA+ +GR A +
Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTSEECASVMTVADALALGRAVADALEAQGA 310
Query: 302 KNVF 305
++
Sbjct: 311 LDIV 314
>gi|319785862|ref|YP_004145337.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1]
gi|317464374|gb|ADV26106.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1]
Length = 301
Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 152/301 (50%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + + L H P +V++PLST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAARLRAAH--PGLEVVLVPLSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E + GE DCAVHS KD+P +L G + A L R D D F+S+ L L
Sbjct: 61 LKELEIAMERGEADCAVHSLKDVPMELEPGFVLPAVLERADPADAFVSNDFADLDALPQG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L R D+ + D RG + TRL KL+ + HAI+LA AG++RL +
Sbjct: 121 AVVGTSSLRRQAQLRARRPDLQLRDLRGNVNTRLAKLDAGEYHAIILACAGLQRLGLDAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L + P+P Q + E + + L+ ++ H T + ERA L GSC
Sbjct: 181 IRARLVPPQWLPAPAQAVVACECRAGDERTIGLLSLLEHAPTRAVIEAERALNRGLHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A +A TL +V ++ G D +G A +
Sbjct: 241 HVPVAAYAELHDRTLRLQALVGSAADGRAVRAEGEGPAADPQTLGSRLAAELLERGAGEF 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|296423212|ref|XP_002841149.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637383|emb|CAZ85340.1| unnamed protein product [Tuber melanosporum]
Length = 349
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 155/313 (49%), Gaps = 11/313 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K RIG+R S LAL R SL ++ P N II ++T GD + L G K
Sbjct: 27 ARKNIRIGSRKSKLALVQTHLVRDSLQAIY--PDTNFEIIAMTTTGDNNQTKPLHNFGAK 84
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
L+T+E+E L+ +++ VHS KDMPT+L G +I A L RED RD + T +SL
Sbjct: 85 ALWTQELEVLLLEDKLEMIVHSLKDMPTQLPHGCKIGAILEREDPRDALVMKTGSSYKSL 144
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
+DL SV+GTSS+RR A + + ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 145 EDLPEGSVVGTSSVRRSAQIKKRYPHLNFEDVRGNVGTRLAKLDDPASSYTCLILAAAGL 204
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + I L+ + GQGA+ +E + ++++V+ H++T ER+
Sbjct: 205 IRLDLGERITGYLSSPCLLHAVGQGALGVEIRDGDEDTAKMLRVLGHKETTLHCLAERSL 264
Query: 237 LAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDA 292
+ L+G C I + +V++ DG+ F V A N GR
Sbjct: 265 MRTLEGGCSVPIGVETETATNGQMLMRAVVVSLDGQNFVNVEERMEVAGEEAADNFGRVV 324
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 325 AGKLVAAGAGDIL 337
>gi|255725590|ref|XP_002547724.1| porphobilinogen deaminase [Candida tropicalis MYA-3404]
gi|240135615|gb|EER35169.1| porphobilinogen deaminase [Candida tropicalis MYA-3404]
Length = 340
Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 151/314 (48%), Gaps = 19/314 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T+E
Sbjct: 16 IGGRKSKLAVVQSELVKKAIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73
Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
+E L+ ++D VHS KDMPT L + ++ RED RD + +SLK
Sbjct: 74 LEILLLDSIDEYPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAVVMKSGSPYKSLK 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177
DL +++GTSS+RR + L++ + RG I+TRLNKL +N+ ++LA AG+
Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPDNEYCCLILASAGLI 193
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L +D + GQGA+ IE + K + +++ I ER+ +
Sbjct: 194 RLGLGDRITSFL--DDMYYAVGQGALGIEIRRGDDKVKPILQKIEDPIATVCCLAERSLM 251
Query: 238 AELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292
L+G C + + T L GI+++ DG ++ E D +G +
Sbjct: 252 RYLEGGCSVPLGVNSNYNEDTQELTLKGIIVSPDGSVWIEDEVVKTINCNEDCEQVGIEL 311
Query: 293 AQYIRFISNKNVFN 306
++ K + +
Sbjct: 312 GDKLKAKGAKEILD 325
>gi|320582367|gb|EFW96584.1| Phorphobilinogen deaminase [Pichia angusta DL-1]
Length = 413
Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 17/317 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LA+ + + ++ P I+ LST GD++ N+ L GGK L+
Sbjct: 81 TVRIGSRKSQLAVVQSEIVGIGIQKLY--PKLQTPIVKLSTLGDQVQNKPLYSFGGKSLW 138
Query: 65 TEEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116
T+E+E L+ +ID VHS KDMPT L ++ L RED RD + +
Sbjct: 139 TKELEVLLLQSFGEFEQIDMIVHSLKDMPTSLPDEFELGCILQREDPRDALVMRKDSPYK 198
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174
SL DL SV+GTSS+RR A LL+ ++ RG + TR+NKL ++ ++LA A
Sbjct: 199 SLSDLPDGSVVGTSSVRRSAQLLKNHPNLRFKSIRGNLNTRINKLDAPDSDYACVILAAA 258
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R+ I + L E+ + GQGA+ +E N+PK +++ + ++ + T ER
Sbjct: 259 GLIRINMGHRITQFLGPEEMLYAVGQGALGVEIRKNDPKMKKICQRLDCKSTSIRCRAER 318
Query: 235 AFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS---RNGNRCDAINIG 289
L L+G C + ++ T LY +VL+ +G E + + N +A+ G
Sbjct: 319 ELLRTLEGGCSVPVGVWSDYNKDTHELYMKSVVLSVEGTQSVEKTLIRKVENFEEAVAFG 378
Query: 290 RDAAQYIRFISNKNVFN 306
+ A + K + +
Sbjct: 379 HELALLLINGGAKAILD 395
>gi|254251705|ref|ZP_04945023.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158]
gi|124894314|gb|EAY68194.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158]
Length = 333
Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L ++D PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLAVDDSPPAAGQGALGIEIASHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DG + DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGTRVLTADACAAVISVADALALGRAVSDELEAQGA 315
Query: 302 KNVF 305
++
Sbjct: 316 LDIV 319
>gi|148544908|ref|YP_001272278.1| porphobilinogen deaminase [Lactobacillus reuteri DSM 20016]
gi|184154245|ref|YP_001842586.1| porphobilinogen deaminase [Lactobacillus reuteri JCM 1112]
gi|227364048|ref|ZP_03848148.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3]
gi|325683253|ref|ZP_08162769.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A]
gi|167008814|sp|A5VM67|HEM3_LACRD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229836109|sp|B2G9H4|HEM3_LACRJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|60172703|gb|AAX14537.1| HemC [Lactobacillus reuteri]
gi|148531942|gb|ABQ83941.1| hydroxymethylbilane synthase [Lactobacillus reuteri DSM 20016]
gi|183225589|dbj|BAG26106.1| porphobilinogen deaminase HemC [Lactobacillus reuteri JCM 1112]
gi|227070970|gb|EEI09293.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3]
gi|324977603|gb|EGC14554.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A]
Length = 305
Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 7/308 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +G+R S LA+A +SL + P I + T+GDR + +L +IGG
Sbjct: 1 MTNKVI-VGSRKSKLAMAQTELVIASLEKI--FPDIKFEIKNVITEGDRNRHVSLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLK 119
KG+F +EIE +L G ID AVHS KD+ L + L + A+ R D +S SL
Sbjct: 58 KGVFVKEIEDELKDGTIDFAVHSLKDVMPILPEELVLGAFPKRVSPYDCLVSRKNLSSLN 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + IGT+SLRR+ LL R D+ +I RG I+TRL K++ I+LA AG+ RL
Sbjct: 118 DLPKGARIGTNSLRRQGQLLSIRPDLKIIPIRGNIDTRLRKIDTEALDGIILAEAGLTRL 177
Query: 180 KKEKVIKEILNIEDFP-PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ +L+++++ P+ GQG + IE N+ + ++++ IN E++ V ER F+
Sbjct: 178 NIDLSSYHVLDLQNYIMPAVGQGCLAIECRKNDTRIRKMLDQINDEESAYCVQVEREFMR 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL GSC I G AY K + F G++ + +G+ + ++ + +G+ A +
Sbjct: 238 ELGGSCNFPIGGHAYAKNGQILFDGLIASPNGEHVIKETKI--PANNSGVGKKVADQLLA 295
Query: 299 ISNKNVFN 306
+
Sbjct: 296 KDKFGIIE 303
>gi|300690776|ref|YP_003751771.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum PSI07]
gi|299077836|emb|CBJ50474.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum PSI07]
Length = 334
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 158/304 (51%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 22 LVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFV 79
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L G + L RED RD F+S+ L L +
Sbjct: 80 KELEVALAEGRADLAVHSLKDVPMELPAGFALPTILEREDPRDAFVSNHYADLAALPAGA 139
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + I
Sbjct: 140 VVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERI 199
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ E P+ GQGA+ IE + P Q + ++H T +V ERA L GSC+
Sbjct: 200 RAVIAPEASLPAAGQGALGIEIRADRPDVQAWLAPLHHAPTALAVTAERAVSRRLGGSCQ 259
Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISN 301
+A FA L V + DG+ +A +G AQ +
Sbjct: 260 VPLAAFAQWTDDGALRLRAFVASQDGRRKLAAEGETTPATLAEAEALGARVAQQMLDGGA 319
Query: 302 KNVF 305
++
Sbjct: 320 HDIL 323
>gi|152980451|ref|YP_001352832.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille]
gi|151280528|gb|ABR88938.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille]
Length = 317
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 159/302 (52%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A R L ++ P +I I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLAILY--PQCSIEILGMTTRGDQILDRTLSKVGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + D AVHS KD+ L G +++A L RED RD F+S+ +L+ L
Sbjct: 65 FVKELEVAIAEQRADLAVHSLKDVAMTLPDGFELAAVLEREDPRDAFVSNEFDTLEALPA 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+AL+ + + RG ++ RL KL+N + AI+LA AG+KRL
Sbjct: 125 GAIVGTSSLRRQALIAARYPQLVIRPLRGNLDRRLGKLDNGEYAAIILAAAGLKRLGLTA 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L E P+PGQGA+ IE +E + +NH +T +V ER GS
Sbjct: 185 RIRSYLPPEQSLPAPGQGAMAIEILSERADLKEWLAPLNHTETALAVTAERTVSRNFGGS 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ +A FA G + I+ DG +G +GR A ++
Sbjct: 245 CQIPLAAFATIDGVNMRLRAIIATPDGSKMASADLSGAANAPEALGRQIADALQQQDAAA 304
Query: 304 VF 305
+
Sbjct: 305 IL 306
>gi|219848200|ref|YP_002462633.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485]
gi|219542459|gb|ACL24197.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485]
Length = 324
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 14/312 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA + + L + ++ + ++T GDR+ + L+ +G KGLF
Sbjct: 4 LLLGTRGSALARTQSEWVANVLR--NTFADLSVELRIITTTGDRVLDVALSAVGDKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122
+E+E+ L++G++D VHSAKDMPT GL +SA+ RED RDV + L L
Sbjct: 62 KELEQALLAGDVDLCVHSAKDMPTATPPGLMLSAFPVREDPRDVLVVRHADVGTDLATLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR + L R D+ + D RG ++TRL KL +++ A++LA AG++RL
Sbjct: 122 TGARIGTSSLRRASQLRYHRPDLHLNDVRGNVDTRLRKLASDQYDALILAAAGLRRLGLW 181
Query: 183 K---------VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+ L+ P+ QG + +ET ++ LV ++ + E
Sbjct: 182 DGTPGASIGAALVYPLDPSVMLPAVAQGILAVETRTDDETTNRLVAALDDSAARTAALAE 241
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
RAFL L+G C+ +A A + L+F G+V A DG + G+ +G A
Sbjct: 242 RAFLRRLEGGCQIPVAAHAVLTEAGLHFRGMVGALDGSTLVFAEQVGDPAQPEAVGIAVA 301
Query: 294 QYIRFISNKNVF 305
+ + + +
Sbjct: 302 EAVLAQGGEAIL 313
>gi|89900504|ref|YP_522975.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118]
gi|122996949|sp|Q21XQ9|HEM3_RHOFD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89345241|gb|ABD69444.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118]
Length = 315
Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 8/299 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL A + L H + ++ ++T GD+I +R L+++GGKGLF
Sbjct: 3 TLTIATRESRLALWQAEYVQDLLTRR----GHQVGLLGMTTLGDQILDRALSKVGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD F+S+ +L L
Sbjct: 59 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLASLPQG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR ALL R D+ + RG ++TRL KL++ AI+LA AG+KRL +
Sbjct: 119 AVVGTSSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLGLSQR 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ D P+ GQGA+ IE + + + H TW +V+ ERA + GSC
Sbjct: 179 IRATFEPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAMGGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFI 299
+A +A L DGK+ V + D A +G A +R
Sbjct: 239 SMPLAAYATLAADILTIDAAWGDPDGKLALVHVRASAAVSDLASATALGARVAADLRAA 297
>gi|46199940|ref|YP_005607.1| porphobilinogen deaminase [Thermus thermophilus HB27]
gi|55980314|ref|YP_143611.1| porphobilinogen deaminase [Thermus thermophilus HB8]
gi|55976454|sp|Q72H57|HEM3_THET2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81600541|sp|Q5SLE8|HEM3_THET8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46197567|gb|AAS81980.1| porphobilinogen deaminase [Thermus thermophilus HB27]
gi|55771727|dbj|BAD70168.1| porphobilinogen deaminase [Thermus thermophilus HB8]
Length = 301
Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 163/303 (53%), Gaps = 8/303 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LALA L + P I + T+GD+ + I
Sbjct: 2 RVVVVGTRGSALALAQTRFVVERLKE--TWPETEFKIRTIKTRGDQGASPREEAI----- 54
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EI++ L+S EID AVHS KD+PT+ +GL+I++ R+D RDVF+ A+ LKDL
Sbjct: 55 FVKEIQEALLSREIDIAVHSLKDLPTESPRGLKIASVPRRQDPRDVFLGKAAKRLKDLPP 114
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL
Sbjct: 115 GAVVGTSSVRRKAQILALRPDLVVRDLRGNVDTRLAALGNGEYDGIVLAAAGLIRLDLRN 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L+ + P+PGQGA+ +E + A+EL ++H ++ V ERAFL L
Sbjct: 175 RIDEFLDPGEVLPAPGQGALALEVREGDDLAEELCYALHHPPSYHRVRAERAFLRGLGAG 234
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + + A+ + TL G++L DGK F G+ +A +G D A+ + +
Sbjct: 235 CLAPVGALAHVEEDGTLRLEGVLLTPDGKSFIRAEIEGDVSEAEELGLDLARDVLEQGGR 294
Query: 303 NVF 305
+
Sbjct: 295 EIL 297
>gi|320168193|gb|EFW45092.1| porphobilinogen deaminase [Capsaspora owczarzaki ATCC 30864]
Length = 333
Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 144/314 (45%), Gaps = 11/314 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+G+R S LAL + L ++ + +ST GD + +R L++IG
Sbjct: 1 MSGRVVRVGSRKSELALIQTNSVIARLKAIYS--DCTFELTTMSTTGDNVLDRALSKIGE 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
K LFT+E+E L E+D VHS KD+PT L G+ I A R+ D I +
Sbjct: 59 KSLFTKELEVALAQNEVDLVVHSLKDLPTTLPPGMTIGAICKRDSPYDAVILRAKFAGLT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGI 176
L L SVIGTSSLRR A L R + D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGSVIGTSSLRRIAQLRRAFPHLVFRDVRGNLNTRLRKLDDAETYAGLILAEAGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + EIL E + GQGA+ IE N+ EL+K + DT ERAF
Sbjct: 179 DRMGWQGRVSEILKPEVTLYAVGQGALAIECRENDTATLELLKPLQDNDTTLRCTAERAF 238
Query: 237 LAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRCDAIN---IGRD 291
+ L+G C + L G V + DG R DA +G+
Sbjct: 239 MRSLEGGCSVPLGVHTEFDASSGQLRLRGGVFSLDGTDSRFAERTITATDAATASGLGQA 298
Query: 292 AAQYIRFISNKNVF 305
A + +
Sbjct: 299 LATEMIAAGAAEIL 312
>gi|296327549|ref|ZP_06870095.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155375|gb|EFG96146.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 298
Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats.
Identities = 109/299 (36%), Positives = 145/299 (48%), Gaps = 7/299 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L P + I + T GD+ N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLVKDRLQ--GNYPNLSFEIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE+KL+ GEID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQKLLDGEIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + ++ +K I++E V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKFLKSIHNETVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F V + +GK + I A+ I+
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IRAVVEDDLAKGKEIAHMVAEEIKNK 295
>gi|258645838|ref|ZP_05733307.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470]
gi|260403210|gb|EEW96757.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470]
Length = 307
Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K I TR S LAL A + + D + P + ++P++TKGD+I +R+L EIGG
Sbjct: 1 MKDKII-IATRESLLALWQAEHVKKRIEDTY--PEIQVELLPVTTKGDQILDRSLLEIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+EK L+ + D AVHS KDM + GL+++A RED RD F+S SL++
Sbjct: 58 KGLFIKELEKLLLEKKADIAVHSLKDMTAVIPDGLKLAAVTAREDPRDAFVSLEYGSLQE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL D+ + RG ++TRL L+ A++LA AG+KRL
Sbjct: 118 LPEGAVVGTSSLRRQAQLLHLWPDLQIKTLRGNVQTRLRHLDEGNYDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ ++ D P+ GQG + IET + + + E+++ I+ E + ERAFL ++
Sbjct: 178 LQERIQSYISTCDSIPAAGQGVMAIETRIGDDETMEIIQFIHDEKVASCIMAERAFLEKV 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G CK +A + + + DGK ++ S NG DA +G A+ +
Sbjct: 238 GGDCKVPAGIYAVPFLGHIEAVAFIGSPDGKEMYKRSLNGQTQDAKQLGESLAEALIADG 297
Query: 301 NKNVFN 306
+
Sbjct: 298 GGRILE 303
>gi|256827644|ref|YP_003151603.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641]
gi|256583787|gb|ACU94921.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641]
Length = 313
Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 153/312 (49%), Gaps = 8/312 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K IGTR S LAL A + R+ + P + + + TKGD+I + L++IG
Sbjct: 1 MTDKTITIGTRGSKLALWQAEKVRALIQA--TFPEVHCAVKVIRTKGDKILDVALSKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLK 119
KGLFT+E+E+ L+ GE+D VHS KDMPT L KGL I+ R DV + S +L
Sbjct: 59 KGLFTKELERCLLEGEVDVCVHSMKDMPTVLPKGLFIAGVTERAYPNDVIVASAKGLTLS 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + + T SLRR A L R R D++ + RG I+TR+ ++ + A +LA AG+ RL
Sbjct: 119 DLPAGARVATGSLRRVAQLARLRPDVTACEIRGNIDTRIGRVLAGEFDAAILAAAGLYRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E+ I ++ E+ P+ GQGAI +E ++ + L I+H+ T +V ER +
Sbjct: 179 GLEEQISSLIPTEEMIPAVGQGAIALEARADDREVAHLCTAISHQPTLRAVEAERYIMRA 238
Query: 240 LDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L+G C+ + +A ++ V DG F + AI
Sbjct: 239 LEGGCQVPMGAYATESEDEQGRRMIHIDAFVATLDGTRFLRAQASTPVDQAIEAAGKIVD 298
Query: 295 YIRFISNKNVFN 306
+ +
Sbjct: 299 DLVSQGATEILE 310
>gi|300087569|ref|YP_003758091.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527302|gb|ADJ25770.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 301
Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 155/303 (51%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+G+R S LALA A ++ L P I+ +ST+GDR ++ E+ G G
Sbjct: 2 RKIRLGSRSSRLALAQAEYLQARLRAA--FPEVEFDIVRISTQGDRNRLVSMGELPGVGF 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L +GE D AVHS KD+P +L ++A RED RDV IS + L L +
Sbjct: 60 FVKEIESALAAGEADIAVHSLKDVPVELPPEFILAAVPEREDTRDVLISR-GRKLDQLPV 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+G+ SLRR + R D+ V RG IETR+ + + A++LA AG+ RL E
Sbjct: 119 GAVVGSDSLRRSFQIRARRPDVEVRSIRGNIETRIKAVEEGRVDAVILAAAGLHRLGLET 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L + +F P PGQ A+ IE N+ ++E +NH T +V ER+FL L G
Sbjct: 179 RIDEYLPLTEFLPPPGQAALGIEVRKNDDFSRETAGAVNHPPTCLAVTAERSFLRRLGGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IA +G L G+V G+ S +G A +G A+ I
Sbjct: 239 CRAPIAALGTVEGDVLTLRGMVADEAGRNIISRSLSGTASAAEAVGGALAEMILEAGANK 298
Query: 304 VFN 306
N
Sbjct: 299 YIN 301
>gi|257124843|ref|YP_003162957.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b]
gi|257048782|gb|ACV37966.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b]
Length = 322
Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats.
Identities = 116/322 (36%), Positives = 170/322 (52%), Gaps = 22/322 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44
M+ IGTR S LALA A + + L+ + K P I + +
Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIKKYDELRENENFCEIEGFDKKNPLEIELKVIV 60
Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101
TKGD+ R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + +
Sbjct: 61 TKGDKDL-RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFP 119
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
RED RDV +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL
Sbjct: 120 MREDNRDVLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179
Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
++ + AI+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K + L+K+I
Sbjct: 180 DDGEYDAIVLAAAGLKRVGLENRITEYFDKDSFMPAPGQGILCIQCRENDNKIRHLLKII 239
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
N ++ ER F DG C + I + +G+TL G+ +G + GN
Sbjct: 240 NDDEVTIMCKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGM-FNDNGIRIFK-EVEGN 297
Query: 282 RCDAINIGRDAAQYIRFISNKN 303
R + + A+ I+ KN
Sbjct: 298 RENPKETAQKLAEEIKKEEMKN 319
>gi|163797975|ref|ZP_02191917.1| Porphobilinogen deaminase [alpha proteobacterium BAL199]
gi|159176769|gb|EDP61340.1| Porphobilinogen deaminase [alpha proteobacterium BAL199]
Length = 321
Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 5/305 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R SPLAL E R L I + + T GD + +R L EIGGKGLF
Sbjct: 15 LTLGSRGSPLALRQTHEVRDRLAAAWPELAGAIAVQEIRTTGDAVRDRPLAEIGGKGLFI 74
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G+ID AVHS KDM T + + A LPRED RD ++S A + DL +
Sbjct: 75 KEIEQALMAGQIDAAVHSMKDMETTIAPASVLVAVLPREDPRDAWLSPIADRVDDLPSGA 134
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT+S+RR A +L R D+ V+ FRG ++TRL KL + LA AG+ RL
Sbjct: 135 KIGTASVRRAAQVLNRRPDLQVVLFRGNVDTRLRKLAEGEVAGTFLAAAGLSRLGMLDKA 194
Query: 186 KEILNIEDFPPSPGQGAICIETH-----VNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
IL +++ P+ QGAI ++ + + + + +++ + V ERA LA L
Sbjct: 195 TRILEVDEMLPAVSQGAIGVQCRDGEASARDAEIRNWLSILDDRPSRLRVTAERAMLATL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+ L G+V + DG+ H D +GR + I
Sbjct: 255 DGSCRTPIAGHATLGGARLTLSGMVFSLDGQSSHGAVDTSATDDPEALGRTVGEAILARG 314
Query: 301 NKNVF 305
+N
Sbjct: 315 GRNFL 319
>gi|167746868|ref|ZP_02418995.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662]
gi|167653828|gb|EDR97957.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662]
Length = 292
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 102/298 (34%), Positives = 158/298 (53%), Gaps = 6/298 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME K RIG+R S LA+A L + P + ++ L T GD+I N+TL +IGG
Sbjct: 1 MEPKRLRIGSRESLLAVAQTRLVIEQLKANY--PELSFELVTLKTTGDKILNKTLDKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ ++
Sbjct: 59 KGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
VIG+SS RR + R + RG I TRL KL+ + ++++A AG+KR
Sbjct: 119 F--GQVIGSSSARRVLQVRRLFPEAEFQSIRGNIHTRLRKLDKGQYSSLIMAAAGLKRAG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I ++E+ P+ GQG +C++ + Q L I+ +T ER+F+ L
Sbjct: 177 LKERISRYFSVEEMLPAAGQGTLCVQVRKDFD--QSLFSCIHDRETELVTEAERSFVRAL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C S IA +A GS L G+ + ++S G DA +GR A+ I+
Sbjct: 235 DGGCSSPIAAYAEITGSDLCLTGLYYNAADNTGRKMSITGKAQDAGGLGRRLAEQIQE 292
>gi|309790863|ref|ZP_07685407.1| porphobilinogen deaminase [Oscillochloris trichoides DG6]
gi|308227150|gb|EFO80834.1| porphobilinogen deaminase [Oscillochloris trichoides DG6]
Length = 353
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 98/333 (29%), Positives = 153/333 (45%), Gaps = 30/333 (9%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M +GTR S LA+ + ++ H + + +STKGDRI + L+ +G
Sbjct: 15 MSNATKLILGTRGSKLAVTQSGMMADAMRAAHA--GLEVEMQLISTKGDRILDVALSAVG 72
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--- 116
KGLF +E+E+ L+ ++D VHS KD+P+ + GL ++A+ PR D RD + +
Sbjct: 73 DKGLFVKELEQALLDNQVDFCVHSCKDLPSVVPDGLTLAAFPPRADARDALVVMESAVGD 132
Query: 117 ---------SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167
L +V+GTSSLRR + R D+ + D RG ++TRL KL + +
Sbjct: 133 LDLSNFSMQDSPLLRQGAVVGTSSLRRACQIRAIRPDLDLRDVRGNVDTRLRKLADGQFE 192
Query: 168 AILLAYAGIKRLKKEK------VIKE---------ILNIEDFPPSPGQGAICIETHVNNP 212
AI+LA AG+ RL E + P+ QG + IE +
Sbjct: 193 AIILASAGLDRLGFTDATIDGPRHFEAVDARFVALPIPTTQMLPAVSQGILAIECRAADA 252
Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
L+ ++H + + ERAFLA L+G C+ IA FA +G L G+V + DG
Sbjct: 253 DTISLLGALDHAPSRAAALAERAFLARLEGGCQVPIAAFAVVEGENLRLRGMVGSLDGTT 312
Query: 273 FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G+ D IG A+ + ++
Sbjct: 313 QVRGELVGSLADPAAIGLALAEDLISQGASDIL 345
>gi|118474504|ref|YP_891866.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40]
gi|158512506|sp|A0RNT3|HEM3_CAMFF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118413730|gb|ABK82150.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40]
Length = 303
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 158/300 (52%), Gaps = 6/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LAL R L+ H++ II + TKGD I + L +IGGKGLFT
Sbjct: 3 IKIASRNSALALWQTHHIRDLLIAQ----GHSVEIITMKTKGDVILDTPLAKIGGKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G D AVHS KD+PT GL+++ RED+RD +S ++L +L +
Sbjct: 59 KELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDAMLSMKYKNLDELPQGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRRK +L R+D+ +I RG + +R+ KL N + AI+LA AGI RL K +
Sbjct: 119 KVGTTSLRRKMQILAHRADLDIISLRGNVNSRIAKLKNGEFDAIILAMAGINRLNLSKEV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K I+ P+ GQGA+ IE ++ + + ++ +N E + ER F+ L+G C+
Sbjct: 179 KFTSAIDT-IPAMGQGALGIEA-IDKKEILDAIEFLNDEKSVVETTIERDFVHTLNGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ I A KG + I+ DG S+ + G++ A K +
Sbjct: 237 APIGINAKLKGDKIEVEAILGLVDGSEILRDSKTYPKLAYKIAGKNFADEFIARGAKELL 296
>gi|215272308|ref|NP_001135813.1| hydroxymethylbilane synthase [Nasonia vitripennis]
Length = 356
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 114/342 (33%), Positives = 164/342 (47%), Gaps = 41/342 (11%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+ FR+G+R S LAL L D++ P I+ +STKGD+I N +L +IG K
Sbjct: 5 EQNVFRVGSRKSELALIQTEYVIKCLKDLN--PDKEFKIVTMSTKGDKILNISLPKIGEK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---L 118
LFTEE+E L + +D VHS KD+PT L +GL + A L RED RD + A S L
Sbjct: 63 SLFTEELENALENNRVDFLVHSLKDLPTTLREGLALGAILEREDPRDAVVMSKAFSAFTL 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
L SVIGTSSLRR A L R + V + RG + TR KL++ AI+LA AG+
Sbjct: 123 DTLPPGSVIGTSSLRRSAYLARNMPHLKVENIRGNLNTRFKKLDDEKGAYAAIILAVAGL 182
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KR+ E I + L+ E+ GQGA+ +E +P+ L++ +NH T ER+F
Sbjct: 183 KRMGLENRISQYLDSEETLYCVGQGALAVECREVDPRVLSLLEPLNHFHTTLRCVAERSF 242
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCD-------- 284
L L G C + + + + L G VL+ +GK+ + + D
Sbjct: 243 LKYLGGGCSAPVGVSSTLENKELKITGAVLSLNGKVLIKDTLKCKLYMPSDDGEPPKKCP 302
Query: 285 ----------------------AINIGRDAAQYIRFISNKNV 304
A +G+D A+ + + V
Sbjct: 303 YREPRTYCGTVPGNMNAISLFGAEQLGKDIAESLIKQNALEV 344
>gi|71275417|ref|ZP_00651703.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon]
gi|71898589|ref|ZP_00680760.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|170730394|ref|YP_001775827.1| porphobilinogen deaminase [Xylella fastidiosa M12]
gi|238059006|sp|B0U2W8|HEM3_XYLFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71163717|gb|EAO13433.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon]
gi|71731713|gb|EAO33773.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|167965187|gb|ACA12197.1| Hydroxymethylbilane synthase [Xylella fastidiosa M12]
Length = 305
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 157/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMRQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + G+V + + +GR AQ + +
Sbjct: 242 VPVGAYASYGVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELL 301
>gi|319792195|ref|YP_004153835.1| porphobilinogen deaminase [Variovorax paradoxus EPS]
gi|315594658|gb|ADU35724.1| porphobilinogen deaminase [Variovorax paradoxus EPS]
Length = 308
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 104/301 (34%), Positives = 153/301 (50%), Gaps = 9/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF
Sbjct: 11 IVIATRESRLALWQAEHVQALLQER----GHTVSLLGMTTRGDQILDKSLSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + G D AVHS KD+P L +G ++ L RED RD +S SL +L +
Sbjct: 67 KELETAIEDGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDAMVSPRYASLDELPHGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E I
Sbjct: 127 VVGTSSLRRVVLLKARRPDVRIEPLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLEDRI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +D P+ GQGA+ IE + EL+ + H W S ERA + GSC
Sbjct: 187 RVAFEPDDMLPAAGQGALGIEVRADREDLIELLAPLAHRGDWLSTAAERAVSRAMGGSCS 246
Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFIS 300
+A A + L +G V + D A +G AA +R
Sbjct: 247 MPLAAHARWQADGVLRIDAAWGDPEGNAPLVRVHAQADVGDFGRADALGEHAAALLRDAG 306
Query: 301 N 301
Sbjct: 307 A 307
>gi|221065751|ref|ZP_03541856.1| porphobilinogen deaminase [Comamonas testosteroni KF-1]
gi|220710774|gb|EED66142.1| porphobilinogen deaminase [Comamonas testosteroni KF-1]
Length = 314
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 100/289 (34%), Positives = 154/289 (53%), Gaps = 8/289 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF
Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +
Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ I
Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSDRI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 187 RARFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCD---AINIGR 290
+A + + L+ +G K V + + D A +G
Sbjct: 247 MPLAAYGRFESDILHMDAAWGDMEGDKGLVRVQASASVTDFASANALGE 295
>gi|50557014|ref|XP_505915.1| YALI0F26609p [Yarrowia lipolytica]
gi|55976378|sp|Q6C097|HEM3_YARLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49651785|emb|CAG78727.1| YALI0F26609p [Yarrowia lipolytica]
Length = 338
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 15/312 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+G R S LAL + L VH P ++ ++ L+T GD++ ++ L GK L+T+E
Sbjct: 21 VGGRKSKLALVQTQHVAAMLKKVH--PDYSFPVLGLTTLGDQVQSKPLYSFDGKALWTKE 78
Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
+E L+ + D VHS KDMPT L G ++ A L RED RD + ++L
Sbjct: 79 LETLLLEKVPGFDQQDIIVHSLKDMPTVLPDGCELGAILTREDPRDALVMAAGSPYKTLA 138
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177
DL SV+GTSS+RR A L + + RG + TRL+KL++ + ++LA AG+K
Sbjct: 139 DLPAGSVVGTSSIRRSAQLKKSYPGLVYESVRGNVGTRLSKLDDPETPYKCLILAAAGLK 198
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L D + GQGA+ +E + K +++++ I +++ ERA +
Sbjct: 199 RLDLGDRITGYLQKPDMLHAVGQGALGLEIRQGDEKTKKILEAIYDKESTLCCLAERAVM 258
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQ 294
L+G C I + L IV++ +G F E ++ +A +G+D A+
Sbjct: 259 RTLEGGCSVPIGVETKYENGKLTLDAIVVSVEGTEFVECTQVRAVEENWEAEQLGKDVAE 318
Query: 295 YIRFISNKNVFN 306
+ K + +
Sbjct: 319 QLVKDGAKKILD 330
>gi|168188066|ref|ZP_02622701.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund]
gi|169294098|gb|EDS76231.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund]
Length = 300
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 105/298 (35%), Positives = 157/298 (52%), Gaps = 6/298 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL + + + P + +STKGDRI + L +IG KGLF
Sbjct: 2 KIVVGSRGSKLALTQTNWIINEIKQNY--PQIQFEVKIISTKGDRIQHIALDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123
+EIE++LISGEID AVHS KDM T + + L+ S RED RDV I + S+ +L +
Sbjct: 60 VKEIEEQLISGEIDMAVHSMKDMSTDIPEELKFSYVPKREDYRDVLILNKKYNSIDELPM 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGT S RR+ LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL E+
Sbjct: 120 NARIGTGSKRRRYQLLQYRDDLNIVPIRGNVETRINKIETENLHGVVLAVAGIKRLNIEE 179
Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ LN PSP QG + +E + ++++K I ++ ERAFL +
Sbjct: 180 KLDYNIFYLNENIMLPSPAQGILALEIKKHREDLEKILKSIEDRNSTIQAIAERAFLKGV 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C I + G++ DG S G DA IG + A+ +
Sbjct: 240 NGGCHVPIGAICNINKDNIEVTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIVLK 297
>gi|57167590|ref|ZP_00366730.1| porphobilinogen deaminase [Campylobacter coli RM2228]
gi|57020712|gb|EAL57376.1| porphobilinogen deaminase [Campylobacter coli RM2228]
Length = 308
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + L + H+ +++ TKGD + + L +IGGKGL
Sbjct: 2 KELVIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 FTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +K
Sbjct: 119 GAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLDK 178
Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ P+ QGA+ IE+ +++ + E +K +N ++ ER F++ L+
Sbjct: 179 QVNFVYTFSKDELIPAASQGALGIES-IDDEQILEFLKCLNDDNALIETTIEREFISTLE 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A + I+ DG + R + + G A+
Sbjct: 238 GGCQVPIGINAELLNDEICVRAILGLPDGSEILKEKRMIKKSEFKGFGESLAKEFIAKGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KEIL 301
>gi|302388903|ref|YP_003824724.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM
16646]
gi|302199531|gb|ADL07101.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM
16646]
Length = 299
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 105/293 (35%), Positives = 169/293 (57%), Gaps = 5/293 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+G+R S LAL L D + P ++ + T+GD++ + L++ GGKG+
Sbjct: 6 RIVRVGSRESRLALVQTEIVIRLLKD--RRPELEFEVVKIKTQGDKLLDVNLSDAGGKGV 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++G ID AVHS KD+P +L +GL I+A RED RDV IS + L +L
Sbjct: 64 FVKEIEEALLAGSIDLAVHSMKDVPYELPEGLCIAAVTEREDPRDVLISRDKRRLLNLRP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRR L R D+ ++ RG + TR+ K+++ + ++LA AGIKRL E+
Sbjct: 124 GARIGTSSLRRSVQLKALRPDLDIVPVRGNVPTRIRKMDDLELDGLVLAAAGIKRLGLEE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+I E E P+ GQGA+ +E ++ EL +++H+ T +V ER+F+ L GS
Sbjct: 184 LIAEYFPPEVIVPAVGQGALAVEARKDD-DILELAGLVSHKATEVAVRAERSFMRALGGS 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ + FA +G+ + G+V +G + + + +G +A IG A+ +
Sbjct: 243 CRVPLGAFARVEGTVVTLVGMV-EKNGSV-CKGTMSGKLKEAEEIGLRLAERL 293
>gi|257459674|ref|ZP_05624783.1| porphobilinogen deaminase [Campylobacter gracilis RM3268]
gi|257443099|gb|EEV18233.1| porphobilinogen deaminase [Campylobacter gracilis RM3268]
Length = 309
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 152/304 (50%), Gaps = 7/304 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + S L + + TKGD+I + L +IGGKGL
Sbjct: 2 KNLIIATRGSVLALWQSKHIASLLNAR----GIQAQLKSMKTKGDKILDTPLAKIGGKGL 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ ++ GE AVHS KD+P + +GL ++A RED+RD IS +L
Sbjct: 58 FTKELEESMLRGESHIAVHSLKDVPVEFPQGLVLAAICAREDVRDAMISEKYSKFDELPR 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRRK LL R D+ VI RG ++TRL KL + + AI+LA AGI RL
Sbjct: 118 GAKVGTTSLRRKMQLLSMRPDLEVISLRGNVQTRLRKLKDGEFDAIILAMAGINRLNLRA 177
Query: 184 VIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K + E P+ GQGA+ IE V+ P+ ++ + E ER F+ L+
Sbjct: 178 EVKHVAPFEISQMIPAMGQGALGIEA-VDEPQILRAIEFLKDERAIIETTVERDFVRVLE 236
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A +G ++ IV DG S + ++G + A+
Sbjct: 237 GGCQVPIGINARLEGENIHISAIVGLPDGSESIRQSIVAQKSQYQSVGAELARVFIEKGA 296
Query: 302 KNVF 305
K +
Sbjct: 297 KQLL 300
>gi|322695309|gb|EFY87119.1| porphobilinogen deaminase [Metarhizium acridum CQMa 102]
Length = 327
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 106/319 (33%), Positives = 158/319 (49%), Gaps = 15/319 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR SPLA+A A +SL V P + I ++T GDR N L GG
Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSV--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------ 114
KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV +
Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLA 172
++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + + AI+LA
Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178
Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG+ R+ + I + L++++ + GQGA+ +E + + +K I H DT +
Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEQVLRALKEIEHRDTLLAC 238
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAIN 287
ER+ + EL+G C I L V++ GK + + +A
Sbjct: 239 LAERSLMRELEGGCSVPIGVETKWADGKLRLRATVVSVTGKEGVDADVLETVTSEEEATE 298
Query: 288 IGRDAAQYIRFISNKNVFN 306
+G+ AQ + + +
Sbjct: 299 LGKRVAQDLVSRGADKILD 317
>gi|322712674|gb|EFZ04247.1| porphobilinogen deaminase [Metarhizium anisopliae ARSEF 23]
Length = 327
Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 158/319 (49%), Gaps = 15/319 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR SPLA+A A +SL + P + I ++T GDR N L GG
Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSI--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------ 114
KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV +
Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLA 172
++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + + AI+LA
Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178
Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG+ R+ + I + L++++ + GQGA+ +E + +K I H+DT +
Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEHVLRALKEIEHKDTLLAC 238
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAIN 287
ER+ + EL+G C I L V++ GK + + +A
Sbjct: 239 LAERSLMRELEGGCSVPIGVETRWVDGKLRLRATVVSVTGKEGVDADVLETVTSEEEAEE 298
Query: 288 IGRDAAQYIRFISNKNVFN 306
+G+ A+ + + +
Sbjct: 299 LGKRVARDLVSRGADKILD 317
>gi|32267226|ref|NP_861258.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449]
gi|39931411|sp|Q7VFE9|HEM3_HELHP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|32263279|gb|AAP78324.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449]
Length = 321
Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 161/309 (52%), Gaps = 10/309 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IG+R S LAL A +S L I + T+GD+I + L +IGGKGL
Sbjct: 9 RELVIGSRGSILALWQAEYIKSCLKAQC---GLQSRIQIIKTRGDKILDVPLAKIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ L+S +ID AVHS KD+P + + L ++A RE D F+S +L L
Sbjct: 66 FTKELEEMLLSKDIDLAVHSLKDVPVEFVPELDLAAITQRESANDCFLSVNYPNLNALPQ 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+ +GT+SLRR + ++RSD+ + RG ++TRL KL+N AI+LA AG+ RLK
Sbjct: 126 GAKVGTTSLRRSMQIKKYRSDLDTLSLRGNVQTRLEKLHNGAFDAIILAQAGVNRLKINT 185
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ I+ ++ P+ GQGA+ IE ++ + V+N + + V+ ERAF+ L+G
Sbjct: 186 QDVRYIVPLDFMIPAMGQGALGIEMRKDSIFFDR-IAVLNDKQSALCVSAERAFVRTLEG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCDAINIGRDAAQYIR 297
C+ I +A + L IV DG + S + + N+G AQ
Sbjct: 245 GCQVPIGVYAQFSNNKLTLQAIVGLPDGSEVLQDSVEDSINIDDINASENLGIAFAQKFI 304
Query: 298 FISNKNVFN 306
K +
Sbjct: 305 DKGAKELLE 313
>gi|86148990|ref|ZP_01067222.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|86153229|ref|ZP_01071433.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88597145|ref|ZP_01100381.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562197|ref|YP_002343976.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|12643831|sp|Q9PHW9|HEM3_CAMJE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85840348|gb|EAQ57605.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85842955|gb|EAQ60166.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88190834|gb|EAQ94807.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359903|emb|CAL34691.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|315927042|gb|EFV06397.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315928698|gb|EFV07978.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 305]
Length = 307
Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|241952386|ref|XP_002418915.1| hydroxymethylbilan synthase, putative; porphobilinogen deaminase,
putative; pre-uroporphyrinogen synthase, putative
[Candida dubliniensis CD36]
gi|223642254|emb|CAX44222.1| hydroxymethylbilan synthase, putative [Candida dubliniensis CD36]
Length = 340
Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 151/314 (48%), Gaps = 19/314 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T+E
Sbjct: 16 IGGRKSKLAVVQSEIVKKAIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73
Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
+E L+ ++D VHS KDMPT L + ++ RED RD + +SLK
Sbjct: 74 LEILLLDSVDEFPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLK 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177
DL +++GTSS+RR + L++ + RG I+TRLNKL NN+ ++LA AG+
Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLI 193
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L +D + GQGA+ IE + + ++K I ER+ +
Sbjct: 194 RLGLGHRITSYL--DDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLM 251
Query: 238 AELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292
L+G C + + S L GI+++ DG + E + R D +G +
Sbjct: 252 RYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTVSIEDQVIKRITCDEDCEQVGIEL 311
Query: 293 AQYIRFISNKNVFN 306
++ K + +
Sbjct: 312 GDKLKAKGAKEILD 325
>gi|91084135|ref|XP_967479.1| PREDICTED: similar to porphobilinogen deaminase [Tribolium
castaneum]
gi|270006650|gb|EFA03098.1| hypothetical protein TcasGA2_TC013007 [Tribolium castaneum]
Length = 460
Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats.
Identities = 108/284 (38%), Positives = 151/284 (53%), Gaps = 12/284 (4%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + + R+G+R S LAL S L +H P + I+ +ST GD++ + L +IG
Sbjct: 1 MSEIEKIRVGSRKSELALIQTRHVISLLKKIH--PGKDFEIVTMSTLGDKVLDIPLPKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ 116
K LFT+E+E L +G +D VHS KD+PT L G+ I A L RED RD + H
Sbjct: 59 EKSLFTKELEAALSTGCVDFVVHSLKDLPTVLPPGMAIGAVLTREDPRDALVLQKDHDKY 118
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAG 175
L+ L SVIGTSSLRR A L R + V RG + TRL KL+ K AI+LA AG
Sbjct: 119 LLETLPEGSVIGTSSLRRGAQLARKYPHLKVESIRGNLNTRLKKLDELGKYQAIILASAG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ I +IL+ ++ + GQGA+ +E ++ K EL+K + T V ER+
Sbjct: 179 LIRMGWTSRISKILDSDELLYAVGQGALAVECRESDEKTIELLKPLYDVQTALRVISERS 238
Query: 236 FLAELDGSCKSAIAG---FAYCKGS--TLYFYGIVLASDGKIFH 274
FL L G C + +A + K + TL G V + DGK
Sbjct: 239 FLKTLGGGCSAPVAVSSDLSRLKDNKHTLKLKGAVWSLDGKEEI 282
>gi|326792716|ref|YP_004310537.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427]
gi|326543480|gb|ADZ85339.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427]
Length = 301
Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL L + P + + TKGD I ++ L +IG KG+F
Sbjct: 2 KVVIGTRGSRLALTQTKWVIDELEKHY--PELACEMKIIKTKGDLIQDKPLDKIGDKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLAL 123
T+EIE +L+ G ID AVHS KDMP++L GL+ + L RED RDV I S++DL +
Sbjct: 60 TKEIEAELLKGNIDMAVHSMKDMPSELPLGLRFTRTLKREDARDVLILKEGYASIEDLPI 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ I T S RRK LL +RSD++++ RG ++TRL KL K I+LA AG+ RL
Sbjct: 120 GATIATGSKRRKYQLLAYRSDLNIVPIRGNVDTRLCKLEEEKLEGIVLAAAGLHRLGLAD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I L +E P+P QGA+ IE + KA +LVKV+ + V ERAF+ ++G
Sbjct: 180 KITCYLPMEIMLPAPAQGALAIEIRQEDTKAYDLVKVLEDPVSSIQVEAERAFMDAINGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C I + G+ L G++ GK +G + A +R KN
Sbjct: 240 CHMPIGAYCEVIGTKLRMRGLLGDELGKKLVIKELCAPIGSEKQLGEELASVLRKEFEKN 299
Query: 304 VFNF 307
++
Sbjct: 300 --DW 301
>gi|68483293|ref|XP_714388.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|68483380|ref|XP_714346.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|10720013|sp|O94048|HEM3_CANAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3859661|emb|CAA21999.1| Porphobilinogen deaminase [Candida albicans]
gi|46435905|gb|EAK95277.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|46435949|gb|EAK95320.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|238883889|gb|EEQ47527.1| porphobilinogen deaminase [Candida albicans WO-1]
Length = 340
Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 19/314 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S LA+ + + + D P + I+ LST GD++ + L GGK L+T+E
Sbjct: 16 IGGRKSKLAVVQSEIVKKVIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73
Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
+E L+ ++D VHS KDMPT L + ++ RED RD + +SLK
Sbjct: 74 LEILLLDSVDEFPKLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLK 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177
DL +++GTSS+RR + L++ + RG I+TRLNKL NN+ ++LA AG+
Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLI 193
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L +D + GQGA+ IE + + ++K I ER+ +
Sbjct: 194 RLGLGHRITSYL--DDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLM 251
Query: 238 AELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDA 292
L+G C + + S L GI+++ DG + E R D +G +
Sbjct: 252 RYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTVSIEDEVIKRITCDEDCEQVGIEL 311
Query: 293 AQYIRFISNKNVFN 306
++ K + +
Sbjct: 312 GDKLKAKGAKEILD 325
>gi|149921672|ref|ZP_01910121.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1]
gi|149817516|gb|EDM76986.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1]
Length = 322
Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats.
Identities = 106/310 (34%), Positives = 161/310 (51%), Gaps = 4/310 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ + R+GTR S LAL A R L+ + ++ + TKGDR+T+R L ++GG
Sbjct: 6 LAARKLRLGTRGSALALWQANMIRDRLLAAWGAQGLEVELVRVVTKGDRVTDRPLNQVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SL 118
GLF + +E KL++GEID AVHS KDMP L +GL +++ R D RD F++ + +L
Sbjct: 66 MGLFVKGLEDKLLAGEIDFAVHSMKDMPGTLPEGLTLASTPERADPRDAFLAAPGRDVTL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L S +GTSSLRR AL R + ++ RG + TR+ K+ + A+LLA AG+ R
Sbjct: 126 ATLPAGSRLGTSSLRRGALAKRINPGLEIVPIRGNVPTRMGKIAEGEVDAVLLAAAGLDR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L K + I E L+ + F P+ QG + IE + L + + H T ER++LA
Sbjct: 186 LGKGEAITERLDPDAFMPAACQGVLAIELRAADTDIAALFEPLGHGPTSIVAAAERSYLA 245
Query: 239 ELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C+ +A A G + G+V+ DG + G DA +G A+ +
Sbjct: 246 TLQGGCQVPLACHARLSEDGRRVRVEGLVVEPDGSTVYASEAEGPVADAAQLGAGVAREV 305
Query: 297 RFISNKNVFN 306
+ V +
Sbjct: 306 LAAGGQGVID 315
>gi|289615845|emb|CBI57434.1| unnamed protein product [Sordaria macrospora]
Length = 338
Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 153/321 (47%), Gaps = 18/321 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K
Sbjct: 5 QKQTVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------- 114
GL+T E+E KL + E+D VH KD+PT L +G +I RED RDV +
Sbjct: 62 GLWTNELEAKLFNNEVDFIVHCLKDVPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 121
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+ L DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A
Sbjct: 122 YKVLADLPEGAIVGTSSVRRAAQLRRQYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 181
Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T +
Sbjct: 182 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 241
Query: 231 NCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAI 286
ERA + L+G C I + L V++ DGK + V +A
Sbjct: 242 FAERAVMRSLEGGCSVPIGVETKWVEDDKLQLKATVVSLDGKESVDGQSVEVVKTTEEAE 301
Query: 287 NIGRDAAQYIRFISNKNVFNF 307
+GR A+ + + + +
Sbjct: 302 EMGRKLAEDLAKRGAQKILDV 322
>gi|221199353|ref|ZP_03572397.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M]
gi|221205745|ref|ZP_03578760.1| porphobilinogen deaminase [Burkholderia multivorans CGD2]
gi|221174583|gb|EEE07015.1| porphobilinogen deaminase [Burkholderia multivorans CGD2]
gi|221180638|gb|EEE13041.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M]
Length = 333
Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPHLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC
Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRADVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V DG + DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNVF 305
+
Sbjct: 316 LEIV 319
>gi|189351191|ref|YP_001946819.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
gi|189335213|dbj|BAG44283.1| hydroxymethylbilane synthase [Burkholderia multivorans ATCC 17616]
Length = 333
Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC
Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V DG + DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNVF 305
+
Sbjct: 316 LEIV 319
>gi|190683048|gb|ACE81820.1| hydroxymethylbilane synthetase [Oxyrrhis marina]
Length = 395
Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats.
Identities = 128/301 (42%), Positives = 180/301 (59%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA A + S + + I I +ST+GDRI +R L ++GGKGLFT
Sbjct: 76 LRIGTRGSPLALAQARDVESRAREQLQQGG-EIDICVISTEGDRILDRALADVGGKGLFT 134
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+SGE+DC VHS KD+PT + G +I AYLPRED RDVF+S +L DL +
Sbjct: 135 KELDRALLSGEVDCCVHSMKDVPTTVAPGTEIVAYLPREDTRDVFLSAKYATLADLPDGA 194
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT+SLRR+A +L ++ V +FRG ++TRL KL LAYAG+KRL
Sbjct: 195 VVGTASLRRQAQILAQ-KNVVVTNFRGNVQTRLRKLAAGTVDCTFLAYAGLKRLGMLAEA 253
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L D P+ QGA+ I+ N+ + + ++HE T +V ERAFL LDGSC+
Sbjct: 254 TQVLEWSDMLPAIAQGAVGIQIRSNDAALRGTLSQLDHEPTRLAVETERAFLRALDGSCR 313
Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG A+ S L F G VL++DGK E + CD +G+ +R + +
Sbjct: 314 TPIAGQAWIGPDSRLAFRGQVLSADGKQRFERVGDCLPCDGPELGKTLGDDLRREAGEEF 373
Query: 305 F 305
F
Sbjct: 374 F 374
>gi|57238255|ref|YP_178664.1| porphobilinogen deaminase [Campylobacter jejuni RM1221]
gi|121612975|ref|YP_001000245.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|148925915|ref|ZP_01809602.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|167005201|ref|ZP_02270959.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|205355401|ref|ZP_03222172.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|81557551|sp|Q5HVM1|HEM3_CAMJR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513884|sp|A1VYQ4|HEM3_CAMJJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|57167059|gb|AAW35838.1| porphobilinogen deaminase [Campylobacter jejuni RM1221]
gi|87250005|gb|EAQ72963.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|145844901|gb|EDK22005.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205346635|gb|EDZ33267.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|284925807|gb|ADC28159.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315057963|gb|ADT72292.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni S3]
Length = 307
Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|317498182|ref|ZP_07956483.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894537|gb|EFV16718.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 312
Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 161/304 (52%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF
Sbjct: 2 KYIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L
Sbjct: 60 VKEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E V
Sbjct: 120 AVIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDV 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC
Sbjct: 180 ITQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN- 303
+ Y + DG G + + A + I+ + +N
Sbjct: 240 HTPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGTC--PEILAQTAVKNIKKTAGRNR 297
Query: 304 VFNF 307
+FN+
Sbjct: 298 IFNW 301
>gi|222823771|ref|YP_002575345.1| porphobilinogen deaminase [Campylobacter lari RM2100]
gi|254800239|sp|B9KGA9|HEM3_CAMLR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222538993|gb|ACM64094.1| porphobilinogen deaminase [Campylobacter lari RM2100]
Length = 308
Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 161/302 (53%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL + ++ L H I + TKGD + + L +IGGKGLFT
Sbjct: 3 LIIATRKSQLALWQSEYIKNKLSQTHS--DLEISLEGFKTKGDVLLDSPLAKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ ++ G+ AVHS KD+P+ KGL ++A RE++ D F+S +SL L +
Sbjct: 61 KELEESMLRGDSHLAVHSLKDVPSFFPKGLVLAAISKREEVNDAFLSEYYESLNALPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRR+ LL R D+++I RG I +RL KL + AI+LA+AGIKRL EK I
Sbjct: 121 KVGTTSLRRRMQLLALRPDLNIISLRGNINSRLEKLKAKEFDAIILAFAGIKRLGLEKQI 180
Query: 186 K--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
K + +++ P+ QGA+ IE+ +++ + + ++ +N ++ + + ER F+ L+G
Sbjct: 181 KFVKKFELDEMIPAASQGALGIES-IDDKQILKYLECLNDKNAFVETHIERDFIKTLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A + IV D + R ++ D G A+ + K
Sbjct: 240 CQVPIGINAKIIDEKIEIRAIVGLPDASKILKEKRMIDKQDYAKAGELLAKEMIAKGAKE 299
Query: 304 VF 305
+
Sbjct: 300 IL 301
>gi|260941880|ref|XP_002615106.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720]
gi|238851529|gb|EEQ40993.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720]
Length = 356
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 17/314 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S LA+ + ++ + P + I+ L+T GD++ N+ L GGK L+T+E
Sbjct: 18 IGGRKSRLAVVQSEFVKAGIEA--NFPELSCSILALNTLGDKVQNKPLYSFGGKSLWTKE 75
Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
+E L+ ++D VHS KDMPT L ++ + RED RD + +SL
Sbjct: 76 LEILLLEAVGDYPQLDMIVHSLKDMPTNLPDEFELGCIVEREDPRDALVVKKGLPFRSLS 135
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIK 177
DL +V+GTSS+RR A LL+ + D RG I TRL+KL++ + ++LA +G+
Sbjct: 136 DLPPGAVVGTSSIRRSAQLLKNYPHLRFEDMRGNIATRLSKLDDPSSPFTCLILAASGLL 195
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L+ D + GQGA+ IE ++ +++ + H + ERA +
Sbjct: 196 RLGLGDRISAPLDAPDMYYAVGQGALGIEIRKDDTVMLSVLRKLEHLPSAYCCYAERAMM 255
Query: 238 AELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDA 292
L+G C + + LYF GI+++ DGK E N+ +A +G +
Sbjct: 256 RMLEGGCSVPLGVKTHYNEQTQQLYFKGIIVSPDGKQSVEAEHTSIIYNKAEAEAVGEEV 315
Query: 293 AQYIRFISNKNVFN 306
A+ + + K + +
Sbjct: 316 ARKLTHLGGKKILD 329
>gi|120437548|ref|YP_863234.1| porphobilinogen deaminase [Gramella forsetii KT0803]
gi|117579698|emb|CAL68167.1| porphobilinogen deaminase [Gramella forsetii KT0803]
Length = 305
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 161/304 (52%), Gaps = 9/304 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + +L H ++P+ + GD ++ L E+G
Sbjct: 1 MS-KVIRIGTRDSELALWQAKTVQKALEST----GHQTELVPVKSTGDLNLDQPLYEMGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +I+G++D AVHS KD+PT L KG+ +A + R + +D + H +
Sbjct: 56 TGIFTKTLDVAMINGDVDIAVHSMKDVPTALPKGIVEAAIMKRANSKD-LLIHKGVEFLE 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRRKA L + V+D RG + TR+ KLN+N + + A AG++R++
Sbjct: 115 NEEG-TIATGSLRRKAQWLHKYPNHKVVDLRGNVNTRMQKLNDNNWNGAIFAAAGLERIE 173
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ P+P QGA+ I + + + V+NH+++ V+ ER FL L
Sbjct: 174 IKPEN--FIDLNWMIPAPAQGAMLIVAMEEDEYCRRALSVLNHKESELCVHVEREFLKTL 231
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A + ++F+G + + DGK EV R+ + ++G++ AQ I
Sbjct: 232 EGGCTAPIGALAKILNNHVHFHGALFSLDGKKKMEVERSLPVAEIEDMGKECAQEILKNG 291
Query: 301 NKNV 304
K +
Sbjct: 292 GKEL 295
>gi|157414826|ref|YP_001482082.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81116]
gi|172047086|sp|A8FKW8|HEM3_CAMJ8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157385790|gb|ABV52105.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81116]
gi|307747464|gb|ADN90734.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni M1]
gi|315931740|gb|EFV10695.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 327]
Length = 307
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPRGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|254303623|ref|ZP_04970981.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323815|gb|EDK89065.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 301
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 148/305 (48%), Gaps = 7/305 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L P I + T GD+ N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLVKEKLE--LNYPNLTFEIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ G + F V + +GK + I AA+ I+
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IKAVVEDYLVKGKEIAHMAAEEIKNKI 296
Query: 301 NKNVF 305
KN
Sbjct: 297 AKNTL 301
>gi|262038272|ref|ZP_06011662.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264]
gi|261747739|gb|EEY35188.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264]
Length = 316
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 163/316 (51%), Gaps = 22/316 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44
M+ IGTR S LALA A + + L+ + K I + +
Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIAKYDELRKKEDFKGISDFNKNESLTIELKIIV 60
Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101
T GD+ R +I G K LF +EIEK+++ +ID AVHS KDMP + +GL + +
Sbjct: 61 TTGDKDL-RDFDKIKGTTQKELFVKEIEKEMLENKIDFAVHSLKDMPQQTPEGLLNACFP 119
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
RED RDV +S + + L +L SVIGT S+RR+ LL R DI + RG I TRL KL
Sbjct: 120 LREDNRDVIVSKSGKKLNELREKSVIGTGSIRRETELLNLRKDIIIKPIRGNIHTRLKKL 179
Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
+N + AI+LA AG+KR I E E F P+PGQG +CI+ N+ + +EL+++I
Sbjct: 180 DNGEYDAIILAAAGLKRTGLSDRITEYFEDEVFMPAPGQGILCIQCRENDDRIRELLEII 239
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
N ++ ER F DG C + I + +G+TL G V DGK G+
Sbjct: 240 NDKEVGIMCETEREFSRIFDGGCHTPIGCSSTIEGNTLKLKG-VYNKDGKRIF-SEIEGD 297
Query: 282 RCDAINIGRDAAQYIR 297
+ + I + A+ I+
Sbjct: 298 KNNPKEIAQKLAKEIK 313
>gi|283955967|ref|ZP_06373457.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792627|gb|EFC31406.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336]
Length = 307
Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ IGT+SLRRK +L R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQILLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQ 178
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYGFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG+ + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGREILKDKRMIKKDDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|164423255|ref|XP_001728039.1| porphobilinogen deaminase [Neurospora crassa OR74A]
gi|55976426|sp|Q6MW51|HEM3_NEUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|38566782|emb|CAE76093.1| related to hydroxymethylbilane synthase [Neurospora crassa]
gi|157070012|gb|EDO64948.1| porphobilinogen deaminase [Neurospora crassa OR74A]
Length = 337
Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 155/321 (48%), Gaps = 18/321 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K
Sbjct: 4 QKETVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------- 114
GL+T E+E KL + E+D VH KDMPT L +G +I RED RDV +
Sbjct: 61 GLWTNELEAKLFNKEVDFIVHCLKDMPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 120
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+SL DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A
Sbjct: 121 YKSLADLPEGAIVGTSSVRRAAQLRRRYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 180
Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T +
Sbjct: 181 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 240
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHE---VSRNGNRCDAI 286
ERA + L+G C I G L V++ DGK + V +A
Sbjct: 241 FAERAVMRTLEGGCSVPIGVETKWVGEDQLQLKVTVVSLDGKESVDGQSVEVIKTIEEAE 300
Query: 287 NIGRDAAQYIRFISNKNVFNF 307
+G+ A+ + + + +F
Sbjct: 301 AMGQKLAEDLAKRGAQKILDF 321
>gi|253582657|ref|ZP_04859878.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium
varium ATCC 27725]
gi|251835527|gb|EES64067.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium
varium ATCC 27725]
Length = 306
Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 153/304 (50%), Gaps = 16/304 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTL 55
K+ IGTR S LA+A + + L + P I + T GD +++L
Sbjct: 9 KRKIVIGTRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSL 66
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV IS +
Sbjct: 67 -----KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLISKSG 121
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
++L +L +VIGTSSLRR L RSD+ + RG I TRLNKL AILLA AG
Sbjct: 122 KTLMELPKGAVIGTSSLRRTMNLKNLRSDLKIKQLRGNIHTRLNKLKTENYDAILLAAAG 181
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KR+ E I E L+ E F P+P QG + I+ N+ + +E++K I+++D V ER
Sbjct: 182 LKRVGLENEITEYLDPEKFLPAPAQGVLHIQCRENDEEIKEILKSIHNKDMEKIVVIERE 241
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
F DG C + + G + G+ G+ + S + I I + A
Sbjct: 242 FSKIFDGGCHTPMGCHCILNGDKITLTGVYFK--GETGYSASITEDAALGIKIAQKLADI 299
Query: 296 IRFI 299
I+
Sbjct: 300 IKEK 303
>gi|149240385|ref|XP_001526068.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239]
gi|146450191|gb|EDK44447.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239]
Length = 347
Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 20/317 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG R S LA+ + + ++ ++ P I+ LST GD++ + L GGK L+T
Sbjct: 20 LQIGGRKSKLAVVQSQLVQQAIQKIY--PDLPSSILALSTLGDKVQTQPLYTFGGKSLWT 77
Query: 66 EEIEKKLISG------EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116
+E+E L+ G +D VHS KDMPT L + ++ RED RD + +
Sbjct: 78 KELEILLMDGIDDEFPRLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSPYK 137
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174
L+DL S++GTSS+RR + L++ + RG I+TRLNKL++ N ++LA A
Sbjct: 138 YLRDLPAGSIVGTSSIRRSSQLIKNYPHLKFESVRGNIQTRLNKLDDPSNPYCCLILASA 197
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ RL I L ++ + GQGA+ IE ++ + +E++K I ER
Sbjct: 198 GLIRLGLGGRITSCL--DEVYYAVGQGALGIEIRKDDHQVKEILKKIEDPVATICCLAER 255
Query: 235 AFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIG 289
+ + L+G C + + ST L GI+++ DG E +R D +G
Sbjct: 256 SLMRYLEGGCSVPLGVHSEYNESTKKLTLKGIIVSPDGSKSIEDEVTKTIESREDCEAVG 315
Query: 290 RDAAQYIRFISNKNVFN 306
D ++ K + +
Sbjct: 316 IDLGDRLKAKGAKEILD 332
>gi|15807343|ref|NP_296073.1| porphobilinogen deaminase [Deinococcus radiodurans R1]
gi|11386849|sp|Q9RRY0|HEM3_DEIRA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|6460165|gb|AAF11898.1|AE002066_2 porphobilinogen deaminase [Deinococcus radiodurans R1]
Length = 309
Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 158/306 (51%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGGK 61
+ +GTR S LALA + L + + P + I +STKGDR L + G K
Sbjct: 2 RTVTVGTRGSTLALAQTRWVVARLKE--EWPETDFRIQTISTKGDRNRESLEQLAQKGDK 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120
G + +EIE+ L++ +ID AVHS KD+PT+ +GL+IS+ R D RD I + L +
Sbjct: 60 GFWVKEIEEALLAKKIDIAVHSLKDLPTEQPEGLEISSIPKRVDGRDALIGREGMKKLAE 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRKA L +R D+ V D RG I+TRL L + + AI+LA AG+ R +
Sbjct: 120 LPEGARIGTSSVRRKAFLRAYRPDLIVKDLRGNIDTRLAALGSGEYDAIILAAAGLIRTE 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E ++ + P+PGQGA+ +ET + E+ I+ T D + ER FLA L
Sbjct: 180 QRHRIDEFVDPDILLPAPGQGALALETRTEDDLTIEVAYAIHDHATDDRITAEREFLAGL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + + A K L G V A DG + G+ + +IG + A +
Sbjct: 240 GAGCMAPVGAHAVIKNGLLTLEGWVGALDGTQVIRATSQGDVAECADIGAELAADMLERG 299
Query: 301 NKNVFN 306
+
Sbjct: 300 AAELIE 305
>gi|46130844|ref|XP_389153.1| hypothetical protein FG08977.1 [Gibberella zeae PH-1]
Length = 335
Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 152/317 (47%), Gaps = 15/317 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +GTR SPLALA +L + P H+ I ++T GDR N L GGKG
Sbjct: 8 KGVVNVGTRKSPLALAQTQIVVDALKQ--RFPDHDFPIHSMTTTGDRDQNTALYNFGGKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTA 115
L+T ++E++L++ E+D VHS KDMPT L +G + RED RD + H
Sbjct: 66 LWTSQLEERLVNRELDIVVHSLKDMPTVLPEGCVLGCVTSREDPRDTLVIKKELQDKHGW 125
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYA 174
++L DL S+IGTSS+RR A L+R + D RG I+TRL KL + I+LA A
Sbjct: 126 KTLADLPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLRKLEEDPDLTGIILAAA 185
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G++R+ I + L E+ + GQGA+ +E ++ K +K I +E T +
Sbjct: 186 GLQRMDLGHHITQFLESENGGILYAVGQGALGVECRGDDEKVLGFLKTIENEQTALACEA 245
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIG 289
ERA + L+G C I L V++ G + +A G
Sbjct: 246 ERALMRALEGGCSVPIGVETKWIDDKLRMKATVVSLRGDEGVDCEIAEAIKTHDEADKFG 305
Query: 290 RDAAQYIRFISNKNVFN 306
+ A+ + + + +
Sbjct: 306 KKVAETLVEQGAQKILD 322
>gi|198415361|ref|XP_002126885.1| PREDICTED: similar to hydroxymethylbilane synthase, b [Ciona
intestinalis]
Length = 359
Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats.
Identities = 101/279 (36%), Positives = 150/279 (53%), Gaps = 6/279 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LA+ + L ++K + I+ ++T GD+I +++L++ G K LF
Sbjct: 6 ILRVGTRKSELAMVQTNWVVNQLKSLNK--SLEVEIVQMATIGDKILDKSLSKTGEKSLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDL 121
T+E+E LI+ ++D V+S KDMP+ L L ISA RED RD I H + L+DL
Sbjct: 64 TKELEDALIANQVDLVVNSLKDMPSTLPPNLTISAVSRREDPRDAVIMHPDNVGKRLEDL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK 180
S++GTSSLRR A L + D+ RG + TRL KL++ + AI+LA AG+KR+
Sbjct: 124 PPGSIVGTSSLRRVAQLKKLFPDLKFKSIRGNLNTRLRKLDDASNFSAIILAVAGVKRMG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I L ++ + GQGA+ IET ++ K+ +LV ++ +DT ERAFL L
Sbjct: 184 WNARISYTLTTDECLYAIGQGALGIETRADDMKSIKLVSQLHDKDTVIRTVAERAFLKTL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
G C A ++ LY G V DG +
Sbjct: 244 GGGCSVPQAVHSWIIEDELYMRGAVFNLDGSKSLYETMQ 282
>gi|254458597|ref|ZP_05072022.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1]
gi|207084905|gb|EDZ62192.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1]
Length = 319
Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats.
Identities = 99/307 (32%), Positives = 167/307 (54%), Gaps = 6/307 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I TR S LAL A+ ++ + + P + + + + GD++ ++ L IGG
Sbjct: 1 MNK--LVIATRVSDLALWQAYHIKARVEASY--PEITVELNKIVSNGDKVLDKPLALIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG FT+E+E ++++G D AVHS KD+PT + +GL++ A R+D DVF+SH +L+D
Sbjct: 57 KGHFTKELEDEMLAGNADIAVHSLKDVPTYIPEGLELVAVTQRQDQSDVFLSHKHATLED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+ LL+ R D+ V D RG + TRL KL+ + AI+LA+ G+ RL
Sbjct: 117 LPQGAVVGTTSLRRRMQLLQQRPDLKVKDLRGNVNTRLRKLSEGQYDAIILAWIGLHRLD 176
Query: 181 KEK--VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
K + L+++ P GQ A+ IE N K +E+ + + +T+ ER F++
Sbjct: 177 LLKDVPFTQKLSLDMMIPPMGQAALGIEIVCGNAKVREIAESLKDLNTFICTQIERDFIS 236
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
++ C + +A A + + F ++ DG + N D+ N+G + A+ +
Sbjct: 237 KIGAGCSAPVACNAVIDDNIITFRVMLGFPDGTNIMQEKVVINVEDSDNLGSELAKKMID 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 NGALELL 303
>gi|17547076|ref|NP_520478.1| porphobilinogen deaminase [Ralstonia solanacearum GMI1000]
gi|24211753|sp|Q8XWW3|HEM3_RALSO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|17429377|emb|CAD16064.1| probable porphobilinogen deaminase (pbg)
(hydroxymethylbilanesynthase) (hmbs)
(pre-uroporphyrinogen synthase) protein [Ralstonia
solanacearum GMI1000]
Length = 334
Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 21 KLVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L
Sbjct: 79 VKELEVALAEGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL +
Sbjct: 139 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSER 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC
Sbjct: 199 IRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHAPTALAVTAERAVSRQLGGSC 258
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIRFIS 300
+ +A FA L V + DG+ + +A +G AQ +
Sbjct: 259 QVPLAAFAQWTDAGALRLRAFVASPDGRRKLAAEAEATPATPAEAEALGARVAQQMLDGG 318
Query: 301 NKNVF 305
++
Sbjct: 319 AHDIL 323
>gi|221211567|ref|ZP_03584546.1| porphobilinogen deaminase [Burkholderia multivorans CGD1]
gi|221168928|gb|EEE01396.1| porphobilinogen deaminase [Burkholderia multivorans CGD1]
Length = 333
Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMRREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC
Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V DG + DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNVF 305
+
Sbjct: 316 LEIV 319
>gi|237744690|ref|ZP_04575171.1| porphobilinogen deaminase [Fusobacterium sp. 7_1]
gi|229431919|gb|EEO42131.1| porphobilinogen deaminase [Fusobacterium sp. 7_1]
Length = 302
Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 150/303 (49%), Gaps = 7/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ N +++
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDVSL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F
Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNENIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ G + F V + +GK + I AA+ I+
Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTA-VYSDEGKQ-IRAVVEDDLTKGKEIAYMAAEEIKNKI 296
Query: 301 NKN 303
NK
Sbjct: 297 NKG 299
>gi|310826391|ref|YP_003958748.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium
limosum KIST612]
gi|308738125|gb|ADO35785.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium
limosum KIST612]
Length = 804
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 6/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LA+ L + P + + + TKGD+I ++ L +IG KG+F
Sbjct: 2 KIIVGSRGSKLAVVQTNWLLEELRKAN--PEVDFELKIIKTKGDKIQHKALDKIGDKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLAL 123
T+E+E L+SGEID AVHS KDMP+ L GL +S RED RDV ++ H ++++L
Sbjct: 60 TKELEDALLSGEIDMAVHSMKDMPSALPDGLTLSVPPMREDPRDVLLTPHKISAIQELPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180
++VIGT S RR L R D V+ RG I+TR+ K+ I+LA AG+KR+
Sbjct: 120 NAVIGTGSKRRIYQLKNIRKDFEVVGIRGNIDTRIRKMKEQGLDGIILAAAGLKRIGVYE 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
L+ F +P QG + +E +N + L++ +++ T + ER FL L
Sbjct: 180 SGDYTCLPLDPCQFVSAPAQGILAVEIREDNETVKALMESVSNPVTKAQMTAERQFLISL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+GSC I + +G L YG+ DG I ++ G + +G A+ ++ +
Sbjct: 240 NGSCHIPIGAYCNVEGEKLTLYGLFGNEDGTILYKGQTEGAMGEEAKMGDRLAKELKEMV 299
Query: 301 NKNV 304
+
Sbjct: 300 EAKI 303
>gi|86151766|ref|ZP_01069980.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124067|ref|YP_004066071.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841395|gb|EAQ58643.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017789|gb|ADT65882.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 307
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ QGA+ IE+ +N+ K EL++ +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLECLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|315453028|ref|YP_004073298.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179]
gi|315132080|emb|CBY82708.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179]
Length = 305
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 154/301 (51%), Gaps = 5/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L + I + TKGD+I + L +IGGKGLF
Sbjct: 4 KLVIGSRGSALALWQARHVQELLKPL----GLESEIKIVKTKGDKILDVPLAKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E L+ G+ID AVHS KD+P L +GL ++ R + +D F+S+ +L+ L +
Sbjct: 60 TKELEVLLLGGKIDLAVHSLKDVPVDLQEGLVLACVSARANPQDCFLSYKYPNLQALPPN 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT+SLRR L R+D + RG ++ RL +L AI+LA AG++RL E
Sbjct: 120 ARIGTTSLRRAMQLKALRTDTDPLSLRGNVQRRLERLQRGDFEAIILACAGVERLGLELP 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L++E+ PS GQGA+ IE N+P + + +N ++ ER F+ L G C
Sbjct: 180 YRVPLSLEEMIPSMGQGALGIEMRANHP-LLDQITSLNDPNSALCCGLERDFVRALGGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A +G + IV DGK F + + R A + + A + +
Sbjct: 239 QVPLGVHARLQGEHIEMRAIVGLVDGKTFIKERASAPRDRAQELAHNLAHTFKQKGALEI 298
Query: 305 F 305
Sbjct: 299 L 299
>gi|296446253|ref|ZP_06888200.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b]
gi|296256290|gb|EFH03370.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b]
Length = 308
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 128/297 (43%), Positives = 168/297 (56%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR SPLALA E R L P + I + T GD I +R L E GG
Sbjct: 1 MTTAILTIGTRGSPLALAQTHEVRRLLAAALGAPEEALPIEIIRTTGDMIQDRPLAESGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT E++ L G ID AVHS+KD+PT L + I+ +LPRED+RD +I SL D
Sbjct: 61 KGLFTRELDIALAEGRIDLAVHSSKDLPTHLPPEIAIAGFLPREDVRDAWIGRGGASLAD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR A + R R D+SV RG +ETRL+K+ + + LLA AG+KRL
Sbjct: 121 LPQGAVVGTASLRRGAQVKRLRPDVSVTLLRGNVETRLHKVESGEVDGTLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
IL +EDF P+ GQGAI I + + ++ + I T ++ ERAFL L
Sbjct: 181 LADKATAILPLEDFLPAAGQGAIAITKRAGDARTRDALAPILDAATGAALAAERAFLTVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
DGSC++ IA A G + F+G+ L +DG +E R G DA +G DAA I
Sbjct: 241 DGSCRTPIAAHARVDGDAMEFHGLALRADGSEIYEARRRGAAIDAARLGDDAANEIL 297
>gi|313205044|ref|YP_004043701.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4]
gi|312444360|gb|ADQ80716.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4]
Length = 306
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 96/303 (31%), Positives = 154/303 (50%), Gaps = 3/303 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK F + TR S LA +T L K P I+ +ST GD +T++ LT GG
Sbjct: 1 MSKK-FVVATRPSLLAYTQTQQTVDLLRV--KNPDCEFEIVKISTHGDTVTDKPLTAFGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F +E+E L G+ A+HS KD+P+ +GL ++A+ R+D RD+ ++ S+ D
Sbjct: 58 TGVFVKELENALYEGKAHFAIHSLKDVPSIQPEGLVLAAFPTRQDPRDLLLTRGGVSVAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L VIGT S RR + + + I+ D RG I+TRL KL + + AI+LA AG+KRL
Sbjct: 118 LPSPCVIGTGSPRRMVQVAKLKEQITFADLRGNIDTRLKKLEDGQYDAIVLAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KE + + P+ GQGAI IE ++ + ++K IN T ++ ER+++ +
Sbjct: 178 KEIAESAYMPTDVCLPAIGQGAIAIECRADDAETIAMLKSINDAATETAIVAERSYMKTI 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G CK + +A + + + ++ + DA +G+ + I +
Sbjct: 238 GGGCKFPLGAYATVESDEVNLHVMLGNHHTGQIIRMHETSTVADAEKLGQKLGEAIIAEA 297
Query: 301 NKN 303
K
Sbjct: 298 EKQ 300
>gi|307636930|gb|ADN79380.1| porphobilinogen deaminase [Helicobacter pylori 908]
gi|325997118|gb|ADZ49326.1| Porphobilinogen deaminase [Helicobacter pylori 2017]
Length = 306
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L++IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKEC---SMESEIRIVKTKGDKILDTPLSKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL +
Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++++ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVKEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ R+ + K
Sbjct: 239 CQIPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|61653263|gb|AAX48216.1| porphobilinogen deaminase [uncultured proteobacterium
DelRiverFos06H03]
Length = 314
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 103/311 (33%), Positives = 150/311 (48%), Gaps = 15/311 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR S LAL A + L H + ++ ++T GD+I ++ L++IGG
Sbjct: 1 MTSQ-LIIATRESRLALWQANHVKELLE----CQGHQVELLGMTTLGDQILDQPLSQIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L G AVHS KD+P L +G +++ L RED RD ++S +SL
Sbjct: 56 KGLFIKELEVALADGSAHLAVHSLKDVPMDLPEGFELACILEREDPRDAWVSPRFESLDS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR LL R D+ + RG ++TRL KL+ + I+LA AG+KRL
Sbjct: 116 LPPGAVVGTSSLRRTVLLKALRPDLKIEPLRGNLDTRLRKLDEGQYAGIVLASAGLKRLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + P+ GQGAI IE P L+ +NH T V ER +
Sbjct: 176 LKDRIRYSFPLNTMTPAAGQGAIGIEICDKRPDLAHLLSNLNHLPTAVQVYAERGVSRTM 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK----------IFHEVSRNGNRCDAINIGR 290
GSC +A A + L + I K +S + A +G+
Sbjct: 236 GGSCSMPLAAHATLETGLLSIHAIWGDPQLKATSLIHAHQQCTLNMSASDVLSQATELGK 295
Query: 291 DAAQYIRFISN 301
AQ +
Sbjct: 296 QVAQKLIAKGA 306
>gi|330813348|ref|YP_004357587.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486443|gb|AEA80848.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063]
Length = 321
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 177/306 (57%), Gaps = 2/306 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGG 60
K+ IG+R S L+LA + + L+ + + P I + + T GD+ L +GG
Sbjct: 3 AKQKLIIGSRGSRLSLAQSEHFKDELLLANPDLRPDQIELKVIKTSGDKFKTENLASMGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE++L+ IDCAVHS KD+PT + L+++A+L R+D RD FIS A+S +
Sbjct: 63 KGLFVKEIEQELLENNIDCAVHSLKDVPTFGVPSLKLAAFLKRKDERDAFISPVAKSFET 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSS+RR A L + RSD++++ RG I+TR+ K+ +I+LAYAG+KRL
Sbjct: 123 LKPGSTVGTSSVRRIAQLKKLRSDLNIVSMRGNIDTRIEKVKEGIYDSIVLAYAGLKRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ EIL+ E P+ GQG + I+ N+ + +L+K +N ++T V+ ER+FL +
Sbjct: 183 FHTHVSEILDKEKMLPAAGQGVVTIQCRSNDGELIKLLKSVNDKETEIIVSAERSFLHRV 242
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G+C + +A A ++ +L+ DGK R G A++IG D A+ I
Sbjct: 243 NGACDTPVAVNAVLNDDGEVFIQAEILSLDGKKVFNAHRTGISEKAVSIGLDVAEEILDK 302
Query: 300 SNKNVF 305
+ +
Sbjct: 303 AGHDFV 308
>gi|167767183|ref|ZP_02439236.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1]
gi|167711158|gb|EDS21737.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1]
gi|291559492|emb|CBL38292.1| porphobilinogen deaminase [butyrate-producing bacterium SSC/2]
Length = 780
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 109/295 (36%), Positives = 154/295 (52%), Gaps = 4/295 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF
Sbjct: 2 KYIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L
Sbjct: 60 VKEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E V
Sbjct: 120 AVIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDV 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC
Sbjct: 180 ITQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ Y + DG G + + A + I+
Sbjct: 240 HTPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGTC--PEILAQTAVKNIKKQ 292
>gi|91789512|ref|YP_550464.1| porphobilinogen deaminase [Polaromonas sp. JS666]
gi|91698737|gb|ABE45566.1| porphobilinogen deaminase [Polaromonas sp. JS666]
Length = 334
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 19/314 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I TR S LAL A ++ L + ++ ++T+GD+I +R+L+++GGKGL
Sbjct: 14 RKIIIATRESRLALWQAEHVKALLESRLGW---QVELLGMTTQGDQILDRSLSKVGGKGL 70
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L G D AVHS KD+P L G ++ L RED D F+S+ SL DL
Sbjct: 71 FVKELEVALSEGRADLAVHSLKDVPMDLPDGFALACVLEREDPHDAFVSNQFASLADLPQ 130
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR LL R D+++ RG ++TRL KL+ HAI+LA AG+KRL +
Sbjct: 131 GAVVGTSSLRRLVLLKALRPDLNIEPLRGNLDTRLRKLDEGHYHAIVLAAAGLKRLGLQA 190
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ I +D P+ GQGA+ IE + + + + H+ TW +V ER + GS
Sbjct: 191 RIRGIFAPDDMLPAAGQGALGIEVRADRHDLMQALGTLAHQPTWLAVTAERTVSRAMGGS 250
Query: 244 CKSAIAGFAY------CKGSTLYFY----GIVLASDGK------IFHEVSRNGNRCDAIN 287
C +A + +G L+ A G+ + + + +A
Sbjct: 251 CSMPLAAYTEGPAAEGSEGMQLHATWGDPATADAPAGQPLAPLVRVQKTAVVRSFAEAEA 310
Query: 288 IGRDAAQYIRFISN 301
+G A +R
Sbjct: 311 LGEAVAAQLRAGGA 324
>gi|50305837|ref|XP_452879.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|55976379|sp|Q6CT60|HEM3_KLULA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49642012|emb|CAH01730.1| KLLA0C15147p [Kluyveromyces lactis]
Length = 327
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 154/321 (47%), Gaps = 17/321 (5%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
ME K RIG R S LA+ + + + + K ++ + T GD++ ++ L G
Sbjct: 1 MESKETVRIGGRRSKLAVVQSEQVKVMIES--KFSHIECPLLSVHTLGDQVQSKPLYSFG 58
Query: 60 GKGLFTEEIEKKLI---SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
GK ++T+E+E L ID VHS KDMPT L G ++ R D D +
Sbjct: 59 GKAVWTKELEDLLYKDDESRIDLIVHSLKDMPTLLPDGFELGGITKRVDPTDALVMPIGS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171
SL +L SV+GTSS+RR A L R ++ RG I+TRL KL++ + I+L
Sbjct: 119 PYSSLSELPDGSVVGTSSVRRSAQLKRKFPNLKFESIRGNIQTRLAKLDDPETPYKCIVL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R + I + N + + GQGA+ IE ++ K ++++K I T
Sbjct: 179 ASAGLMRSGLDSRITQRFNADTMCYAVGQGALGIEIRKDDEKMKKILKEICDPSTTICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDA 285
ER+ L L+G C I + ST L GIV+ +G + E+ + R D+
Sbjct: 239 AERSLLRTLEGGCSVPIGVVSNYDESTKVLTLKGIVINVEGTEWVEIEHKVTISNEREDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
IN G++ A + K + +
Sbjct: 299 INCGKELAAKLTQNGAKEILD 319
>gi|328474912|gb|EGF45712.1| porphobilinogen deaminase [Listeria monocytogenes 220]
Length = 288
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 107/285 (37%), Positives = 156/285 (54%), Gaps = 7/285 (2%)
Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83
+ L + + P + I + TKGDRI + TL+++GGKGLF E+E+ L ID AVHS
Sbjct: 2 INKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHS 59
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KD+P+ L +GL I A RE D F+ + SL +L SVIGTSSLRR A LL+ R
Sbjct: 60 MKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELPQGSVIGTSSLRRAAQLLKHRP 119
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK---EILNIEDFPPSPGQ 200
D + RG I+TRL KL+ AI+LA AG+ R+ + E + E P+ GQ
Sbjct: 120 DFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWLENTTLKLEDIPPELCLPAVGQ 179
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
GA+ IE ++ + ++++ I+HE+T V ER FL +L+G C+ IAGFA ++
Sbjct: 180 GALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEVVH 239
Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
F G+V +DG I + G + IG A+ + +
Sbjct: 240 FKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLSEGADTII 282
>gi|45185123|ref|NP_982840.1| ABL107Cp [Ashbya gossypii ATCC 10895]
gi|55976464|sp|Q75DY0|HEM3_ASHGO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|44980759|gb|AAS50664.1| ABL107Cp [Ashbya gossypii ATCC 10895]
Length = 326
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI R S LA+ + + + + P + ++ T GD++ ++ L GG
Sbjct: 1 MGEETLRIAGRRSKLAVIQSESVKEIVQR--EFPNYTCTVLAKQTLGDQVQSKPLYAFGG 58
Query: 61 KGLFTEEIEKKL----ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SH 113
K L+T+E+E L + ID VHS KDMPT+L +G ++ A R D D +
Sbjct: 59 KALWTKELEDLLYEEDLDQRIDMIVHSLKDMPTQLPEGFELGAITKRVDPSDCLVMAAGS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
++L DL SV+GTSS+RR A L R + RG I+TRL KL++ N+ I+L
Sbjct: 119 PYKTLGDLPNGSVVGTSSIRRSAQLRRRYPHLVFASVRGNIQTRLKKLDDPENECKCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ RL E I + + + GQGA+ IET + + Q ++ + ++
Sbjct: 179 ATAGLVRLGLESRITQRFDSTIMLHAVGQGALGIETRTGDERLQAILAKVADRNSTICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN----GNRCDA 285
ER+ + L+G C I ++ T L G+V++ DG E + + ++ DA
Sbjct: 239 AERSLMRTLEGGCSVPIGVYSTFDEETSMLTLDGLVVSVDGADAAEATVSYKIKSDKEDA 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
I G+ A + K + +
Sbjct: 299 IACGQLLAAKLLEAGAKKILD 319
>gi|237736083|ref|ZP_04566564.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817]
gi|229421794|gb|EEO36841.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817]
Length = 299
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 154/304 (50%), Gaps = 16/304 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTL 55
KK IG+R S LALA + + L P + I + T GD+ +++L
Sbjct: 2 KKKIVIGSRGSILALAQSEIVKQQLEK--NFPEYEFEIKKIVTSGDKDLVSNWNNSDKSL 59
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
K FT+EIE +L++ ID AVHS KDMP+ +GL A RED RDV IS
Sbjct: 60 -----KSFFTKEIEVELLNETIDLAVHSMKDMPSISPEGLICGAIPDREDQRDVLISKNG 114
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
++L +L +++GTSSLRR + R D+ + RG I TRLNKL AILLA AG
Sbjct: 115 KTLMELPKGAIVGTSSLRRTMNIKSLRPDLQIKQLRGNIHTRLNKLKTEDYDAILLAAAG 174
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KR+ E I E L+ + F P+P QG + I+ N+ + + ++K I+ ED V ER
Sbjct: 175 LKRVGLENEITEYLDPKIFLPAPAQGVLHIQCRENDEEIKNILKTIHKEDIKKIVVIERE 234
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
F DG C + + ++ G + FYG+ + + + S + I + + A
Sbjct: 235 FSKIFDGGCHTPMGCYSEVNGDKITFYGVYFKDN--LGYTASITEKLSEGIRVAQKLADT 292
Query: 296 IRFI 299
I+
Sbjct: 293 IKEK 296
>gi|68171155|ref|ZP_00544563.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657743|ref|YP_507506.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas]
gi|123722778|sp|Q2GGC7|HEM3_EHRCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|67999425|gb|EAM86066.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599200|gb|ABD44669.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas]
Length = 298
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 5/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+A E ++ L P ++ I+ + T GD L+ IGGK LF
Sbjct: 3 IRIGTRGSILAIAQTLEIKNLL--NRYFPEISVQIVKIKTSGDINNQVPLSAIGGKSLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G++D AVHS KD+P +GL I L R DVFIS + +K L L++
Sbjct: 61 KEIEEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RRK L R D+ V+ RG I+TR+ K N + I+LA AG+ R+ + VI
Sbjct: 121 TIGTSSVRRKVQLNYLRPDLQVVPVRGNIDTRILKANVGEFDGIVLAEAGLIRINRCDVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KEIL+ + + GQGAI I+ V++ +KV+N ++ V ER+FL ++GSC
Sbjct: 181 KEILSPKIMLSAVGQGAIGIQCRVDDHSIINKIKVLNCHQSYVCVMAERSFLKTINGSCD 240
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A A Y T++ ++ K S N CDA G + + +
Sbjct: 241 TPLAALAQYVNNDTIHMSCMLANE--KNMVFASCCFNECDAEKSGINMGKKL 290
>gi|299066045|emb|CBJ37226.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum CMR15]
Length = 334
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 6/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 21 KLVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L
Sbjct: 79 VKELEVALAEGRADLAVHSLKDVPMELPPGFALSAILEREDPRDAFVSNDYADLAALPAG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL
Sbjct: 139 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSAR 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC
Sbjct: 199 IRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHVPTTLAVTAERAVSRQLGGSC 258
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIRFIS 300
+ +A FA L V + DG + +A +G AQ +
Sbjct: 259 QVPLAAFAQWTDAGALRLRAFVASPDGSRKLAAEAEATPATPAEAEALGARVAQQMLDGG 318
Query: 301 NKNVF 305
++
Sbjct: 319 AHDIL 323
>gi|283954165|ref|ZP_06371690.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414]
gi|283794444|gb|EFC33188.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414]
Length = 307
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEYIAQILKKTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESILRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSKNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ +GT+SLRRK LL R D+ +I RG + +R+ KL N + AI+LA AGIKRL +K
Sbjct: 119 ARVGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGEFDAIILAMAGIKRLSLDKQ 178
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMICKSDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|301630638|ref|XP_002944423.1| PREDICTED: porphobilinogen deaminase-like [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 8/301 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A ++ L H + ++ L+T+GD+I +R+L++IGGKGLF +E
Sbjct: 47 IATRESRLALWQAAHVQALLAAR----GHAVTLLGLTTQGDQILDRSLSKIGGKGLFVKE 102
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L G D AVHS KD+P +L G ++ + RED RD F+S SL L +V+
Sbjct: 103 LELALEQGRADIAVHSLKDVPMELPAGFALACVMEREDARDAFVSPRYASLDALPQGAVV 162
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+ LL R + + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 163 GTSSLRRQVLLQALRPGLRIEPLRGNLDTRLRKLDAGQYDAIVLAAAGLKRLGLGERIRS 222
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 223 VFAPAEILPAAGQGALGIEVRSDRQDLIDALAPLAHRPTWLTVAAERAVSRAMGGSCSMP 282
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISNKN 303
+A +G+TL+ +G+ A +G A +R +
Sbjct: 283 LAAHGQWQGNTLHLDAAWGDPEGRTALVRAQVQAAVATLAQAEALGDAVAARLRAGGAQG 342
Query: 304 V 304
+
Sbjct: 343 L 343
>gi|239814381|ref|YP_002943291.1| porphobilinogen deaminase [Variovorax paradoxus S110]
gi|239800958|gb|ACS18025.1| porphobilinogen deaminase [Variovorax paradoxus S110]
Length = 308
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 151/301 (50%), Gaps = 9/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF
Sbjct: 11 IVIATRESRLALWQAEHVQALLQER----GHAVSLLGMTTRGDQILDKSLSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L +G ++ L RED RD +S SL +L +
Sbjct: 67 KELELALEEGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDALVSPRHASLDELPQGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL E I
Sbjct: 127 VVGTSSLRRVVLLRALRPDLRIEPLRGNLDTRLRKLDQGHYDAIVLAAAGLKRLGLEHRI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + P+ GQGA+ IE + L+ ++H W + ERA + GSC
Sbjct: 187 RVAFDPDTMLPAAGQGALGIEVRADRTDLIALLAALSHSRDWLATAAERAVSRSMGGSCS 246
Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRDAAQYIRFIS 300
+A A + L +G V D A +G AA +R
Sbjct: 247 MPLAAHARWQADGALRVDAAWGDPEGNAALVRVHAQAPAADFAQAGALGERAAALLRDAG 306
Query: 301 N 301
Sbjct: 307 A 307
>gi|33520023|ref|NP_878855.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus]
gi|39931423|sp|Q7VRM4|HEM3_BLOFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33504369|emb|CAD83262.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus]
Length = 311
Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIG 59
M+ K RI TR SPLA+ A + L H P +IP+ T GD + + T
Sbjct: 1 MQAKILRIATRKSPLAICQACYVCNKLKHYH--PHIQTELIPIITTGDTSLHTVSKTNKI 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KG F +E+E LI D AVHS KD+ L K L I R D RD F+S ++
Sbjct: 59 KKGAFIKELEYALIEHRADIAVHSMKDVTVLLPKELIIPVLCKRHDPRDAFVSIQYPNIH 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L S+IGTSSLRR+ + RSD+ + D RG I TR+ KL+ + +AI+LA AG+ RL
Sbjct: 119 SLPTGSIIGTSSLRRQCQIRAQRSDLILHDLRGNINTRIKKLHQGQYNAIILAVAGLTRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K K I+ ++ + P+ GQG I IE +N+ L+ + H++T + ERA
Sbjct: 179 KLTKYIQTYIDPSELLPAMGQGVIAIECRINDINTISLLSPLYHKETSLCIKSERAVTTY 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+ C+ IA +A + + ++ ++ DG I + A +G + A+ +
Sbjct: 239 LESYCRLPIASYAEIQNNQIWLRALIGLPDGSIIIRTEGIASLDKAEELGLNLAKDLLIQ 298
>gi|313682001|ref|YP_004059739.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994]
gi|313154861|gb|ADR33539.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994]
Length = 313
Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 6/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + +S + + + + + T GD+I + L +IGGKGL
Sbjct: 2 KKLTIATRGSKLALWQSNHIKSVIES--QFSDVEVELKIIITSGDKILDVPLAKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ GE AVHS KD+PT + +GL +SA RED+RD +S +K L
Sbjct: 60 FLKEIEESMLRGEAQMAVHSLKDVPTVMPQGLLLSAITVREDVRDAMLSEKYPDIKSLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+ L++ R D+ + D RG ++TR+ KL + AI+LA AGI RL
Sbjct: 120 GAVVGTSSLRRRMQLVQQRPDLVIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLGFSN 179
Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+++ I ++ P+ GQGA+ IET VN P E+ K + E++ ER F+ L
Sbjct: 180 LVQYFYPIALDEMLPAMGQGALGIET-VNEPWVLEIAKFLEDENSRIETTIERGFVDTLQ 238
Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I A + + + DG + +G A+ +
Sbjct: 239 GGCQVPIGVSARVQPNGEVIVRSTLGMPDGSEVMGDEVVVAKGQTEGVGEAMAKRLIAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AMELL 303
>gi|255262497|ref|ZP_05341839.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
gi|255104832|gb|EET47506.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
Length = 316
Score = 322 bits (827), Expect = 4e-86, Method: Composition-based stats.
Identities = 131/305 (42%), Positives = 176/305 (57%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP +IGTR SPLALA A ETR L +P I + T GDRI +R L EIGGKG
Sbjct: 9 TKPLKIGTRGSPLALAQAHETRERLAAAFDLPHEAFAIQVIQTTGDRIIDRPLKEIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ ++ G ID AVHS KDMPT GL + YLPRED+RD FI+ +L DL
Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPTLQPDGLLLDTYLPREDVRDAFIALDGGTLADLP 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
V+GTSSLRR+A L R D+ V++FRG ++TRL KL + A A LA AG+ RLK +
Sbjct: 129 DGGVVGTSSLRRQAQLRLRRPDLQVVEFRGNLQTRLRKLGDKVADATFLAMAGLNRLKMD 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + + +E+ P+ QGAI IE N+ +A +++ I+ T ++ ERAFL LDG
Sbjct: 189 DVTRTPIEVEEMLPAVAQGAIGIERRANDLRAADMLAAIHDRLTGQRLSAERAFLQALDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IA A G+++ G VL DG D G+ A + + +
Sbjct: 249 SCETPIAALAELDGTSMRLRGEVLRPDGSEAIGDDVTILIEDGAAAGQAMAARLLANAGE 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|153952621|ref|YP_001398427.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei
269.97]
gi|166201501|sp|A7H4J7|HEM3_CAMJD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152940067|gb|ABS44808.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei
269.97]
Length = 307
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSTDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQ 178
Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ QGA+ IE+ + + K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-IKDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGEGLAKEFITKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|325995520|gb|ADZ50925.1| Porphobilinogen deaminase [Helicobacter pylori 2018]
Length = 306
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 95/303 (31%), Positives = 152/303 (50%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L++IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKEC---SMESEIRIVKTKGDKILDTPLSKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD +S L L
Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTVLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL +
Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++++ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVKEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ R+ + K
Sbjct: 239 CQIPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|308184042|ref|YP_003928175.1| porphobilinogen deaminase [Helicobacter pylori SJM180]
gi|308059962|gb|ADO01858.1| porphobilinogen deaminase [Helicobacter pylori SJM180]
Length = 306
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANYIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLQRLN 175
Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+
Sbjct: 176 VQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I A G + ++ +GK + G++ A ++ ++ +
Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQS 294
Query: 300 SNKNVFN 306
K +
Sbjct: 295 GAKEILE 301
>gi|208434184|ref|YP_002265850.1| porphobilinogen deaminase [Helicobacter pylori G27]
gi|226706288|sp|B5ZA04|HEM3_HELPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|208432113|gb|ACI26984.1| porphobilinogen deaminase [Helicobacter pylori G27]
Length = 306
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 153/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLEREFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ +D + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQDLLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|305433096|ref|ZP_07402252.1| hydroxymethylbilane synthase [Campylobacter coli JV20]
gi|304443797|gb|EFM36454.1| hydroxymethylbilane synthase [Campylobacter coli JV20]
Length = 308
Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 148/304 (48%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR S LAL + L H + + TKGD + + L +IGGKGL
Sbjct: 2 KELVIATRKSQLALWQSEFIADFLNKTH---GIAVRLEGFKTKGDVLLDSPLAKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 FTKELEESMLRNEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +K
Sbjct: 119 GAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLDK 178
Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ P+ QGA+ IE+ +++ K + +K +N ++ ER F++ L+
Sbjct: 179 QVNFVYTFSKDELIPAASQGALGIES-IDDEKFLKFLKCLNDDNALIETTIEREFISTLE 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A G + I+ DG + R + D G A+
Sbjct: 238 GGCQVPIGINAELLGDEICVRAILGLPDGSEILKEKRMIKKSDFKGFGESLAKEFIAKGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELL 301
>gi|317008888|gb|ADU79468.1| porphobilinogen deaminase [Helicobacter pylori India7]
Length = 306
Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats.
Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIQERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 120 AKVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ ++ + K
Sbjct: 239 CQIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLIQELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|50424323|ref|XP_460748.1| DEHA2F08888p [Debaryomyces hansenii CBS767]
gi|55976377|sp|Q6BM23|HEM3_DEBHA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49656417|emb|CAG89089.1| DEHA2F08888p [Debaryomyces hansenii]
Length = 361
Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 153/314 (48%), Gaps = 17/314 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S LA+ + + + V K P + ++ LST GD++ ++ L GGK L+T+E
Sbjct: 21 IGGRKSKLAVVQSEIVKECI--VEKFPELSCSVLALSTLGDKVQSKPLYSFGGKALWTKE 78
Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
+E L+ +D VHS KD+PT L + ++ L RED RD + + +SL
Sbjct: 79 LEILLLEQVEEYPRLDLIVHSLKDIPTNLPEEFELGCILNREDARDALVMKSGSSYKSLA 138
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177
DL S++GTSS+RR + LL+ + RG ++TRLNKL++ +LLA AG+
Sbjct: 139 DLPDGSLVGTSSVRRSSQLLKNHPKLRFDSVRGNLQTRLNKLDDENSPFECLLLASAGLI 198
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ I L+ + + GQGA+ IE + K +L+K I T ER+ +
Sbjct: 199 RIGLGDRITAHLDAPEMYYAVGQGALGIEIRKGDEKMLQLLKTIEDLPTTYCCLAERSLM 258
Query: 238 AELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDA 292
L+G C I ++ + L I+++ DG F E G N+ DA IG
Sbjct: 259 RHLEGGCSVPIGVQSHYNESTNELSLKAIIVSPDGIHFVEDEYKGVVNNKDDADAIGIKV 318
Query: 293 AQYIRFISNKNVFN 306
+ + + N
Sbjct: 319 GDLLSAKGGREILN 332
>gi|217031453|ref|ZP_03436958.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128]
gi|298736817|ref|YP_003729347.1| hydroxymethylbilane synthase [Helicobacter pylori B8]
gi|216946653|gb|EEC25249.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128]
gi|298356011|emb|CBI66883.1| hydroxymethylbilane synthase [Helicobacter pylori B8]
Length = 306
Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats.
Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + T GD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G ID AVHS KD+P KGL ++ R D RD F+S L L +
Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADARDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL +
Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPVGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|145254797|ref|XP_001398757.1| porphobilinogen deaminase [Aspergillus niger CBS 513.88]
gi|134084341|emb|CAK48681.1| unnamed protein product [Aspergillus niger]
Length = 334
Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 156/315 (49%), Gaps = 12/315 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F IGTR S LAL +++L P + I T GD+ T L + K
Sbjct: 13 SRKTFTIGTRKSKLALLQTDLVQAALKQ--TWPDYEFKIHSRETAGDQNTTIALRDFTTK 70
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
L+T+E+E LI+G++D VHS KD+PT L + + RED RDV + SL
Sbjct: 71 NLWTQELEDLLIAGQVDFIVHSLKDVPTLLPSSCTLGPMMKREDTRDVLVMKKGLSYTSL 130
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + V+D RG I TRL+KL+ + ++LA AG+
Sbjct: 131 AELPEGSVVGTSSIRRTAQLARRYPHLKVMDVRGNIGTRLSKLDAEDGPFTCLILAAAGL 190
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL I L+ ++ + GQGA+ IE ++ + ++++ I H++T + ER
Sbjct: 191 LRLDLGDRITSYLDSKNGGMLYAVGQGALGIEIRKDDQQVLDMLQNIGHKETTFACLAER 250
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291
+ L L+G C + + + L IV++ DGK EV +G + A G
Sbjct: 251 SLLRTLEGGCSAPLGVESEWVNGALTMRSIVVSVDGKESAEVEVDGAVDSPQAAEEFGVT 310
Query: 292 AAQYIRFISNKNVFN 306
A+ + + +
Sbjct: 311 VAKALVEKGAGKILD 325
>gi|269119644|ref|YP_003307821.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386]
gi|268613522|gb|ACZ07890.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386]
Length = 297
Score = 321 bits (824), Expect = 8e-86, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 154/303 (50%), Gaps = 11/303 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG--- 60
+ +GTR S LA+A A + L++ KIP + I + T GDR GG
Sbjct: 2 RKIVMGTRGSVLAVAQAETVKKMLIE--KIPGLTVEIKKIVTSGDRDQTT---NWGGDSS 56
Query: 61 -KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K +F +EIE++L+ G ID AVHS KDMP +GL + + RED RDV +S
Sbjct: 57 LKSMFVKEIERELLEGTIDFAVHSMKDMPQISPEGLINACFPIREDNRDVLVSKNNTVFS 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
++ SVIGTSSLRRK+ + ++ + RG I TRL KL++ + I+LA AG+ R
Sbjct: 117 EMPSGSVIGTSSLRRKSAVTELYPEMEIKPIRGNIHTRLGKLDSGEYDGIILAAAGLIRT 176
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I E ++ E PP+P QG +C++ NN + E++K I+ +T ER F
Sbjct: 177 GLESRISEYIDPEKMPPAPAQGILCVQCRENNMEILEILKEIDDRETRIICEAEREFSRI 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + FA K ++ G+ + G+ + G+ + A+ IR
Sbjct: 237 FDGGCHTPMGCFAVIKEEEIFLKGMFCS--GEKMYFGEAGGSIEKPKEAAQKLAEIIRRQ 294
Query: 300 SNK 302
N+
Sbjct: 295 INE 297
>gi|83313519|ref|YP_423783.1| porphobilinogen deaminase [Magnetospirillum magneticum AMB-1]
gi|82948360|dbj|BAE53224.1| Porphobilinogen deaminase [Magnetospirillum magneticum AMB-1]
Length = 262
Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats.
Identities = 106/257 (41%), Positives = 159/257 (61%)
Query: 51 TNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
+R L EIGGKGLFT+E+++ ++SG I AVHS KD+PT+L G+ + LPRED+RD F
Sbjct: 2 QDRPLAEIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTQLPDGIVLPCILPREDVRDAF 61
Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
+S SL +L +V+GTSSLRR A +L R D+ V++FRG ++TRL KL A +
Sbjct: 62 LSLKVGSLAELPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLEEGVVDATM 121
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG++RL + L+ +D P+ QGAI I ++ + + + +N D++ V
Sbjct: 122 LAMAGLRRLGLAQHATSALSEDDMLPAVAQGAIGITCRADDQASLDYLAALNCPDSFVRV 181
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
ERAFL LDGSC++ IA A G L F G++++ DG H +R+G+R DA +G+
Sbjct: 182 AAERAFLTRLDGSCRTPIAALAELDGDRLSFRGLIVSPDGTTVHATARSGSRADAEAMGK 241
Query: 291 DAAQYIRFISNKNVFNF 307
DAA+ + ++ F+
Sbjct: 242 DAAEELIKVAGPGFFDL 258
>gi|195490377|ref|XP_002093114.1| GE21148 [Drosophila yakuba]
gi|194179215|gb|EDW92826.1| GE21148 [Drosophila yakuba]
Length = 653
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++
Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 122 ASLPQGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F
Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241
Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L L G C + +A ++ KG L G V + DG I +
Sbjct: 242 LKTLGGGCSAPVAVWSTLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE--- 298
Query: 288 IGRDAAQYIRFISNKN 303
+ R +
Sbjct: 299 --QKLEGEQRKRGAQE 312
>gi|15611292|ref|NP_222943.1| porphobilinogen deaminase [Helicobacter pylori J99]
gi|11133270|sp|Q9ZMJ7|HEM3_HELPJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4154748|gb|AAD05809.1| PORPHOBILINOGEN DEAMINASE [Helicobacter pylori J99]
Length = 306
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 97/307 (31%), Positives = 155/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I + T GD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKEC---SMESEIRIVKTTGDKILDAPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL
Sbjct: 116 LPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175
Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++++ PS GQGA+ +E N+ ++ +N+E++ + ER F+
Sbjct: 176 VQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFIT-LQKLNNEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I A G + ++ +GK + G++ A ++ ++ +
Sbjct: 235 LNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQS 294
Query: 300 SNKNVFN 306
K +
Sbjct: 295 GAKEILE 301
>gi|124005986|ref|ZP_01690823.1| porphobilinogen deaminase [Microscilla marina ATCC 23134]
gi|123988393|gb|EAY28039.1| porphobilinogen deaminase [Microscilla marina ATCC 23134]
Length = 308
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 7/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L ++ + TKGD+I N+ L++IG KG+FT
Sbjct: 3 IRIGTRGSKLALWQANYVADLLQKGGA----TTELVMVETKGDKILNKALSKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALH 124
EE+E+ L E+D AVHSAKD+ + L L++ A+ RE++ DV IS +T L
Sbjct: 59 EELEEHLRQKEVDIAVHSAKDVQSTLPDDLELIAFSEREEVHDVLISFNTDARLDTFNSS 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+IGTSS RR A L + I D RG ++TR+ KL A++LAYAG+ R+ K
Sbjct: 119 YIIGTSSTRRVAQLKHYYPKIRTADVRGNLQTRMKKLEKGNYDALILAYAGVHRMGFSKY 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L+ F P+ GQG + IE + N K + + +N + T + ER+FL L+G
Sbjct: 179 IVEDLSPNKFIPAVGQGCVAIEAAKDLNNDKVAMIRQCVNDKKTEQCLRAERSFLKTLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + G A K + + G +++ +G+ + G D ++IG+ A+ I +
Sbjct: 239 GCSIPVFGLARIKKNQIELKGGIISLNGQDLVKQQAKGVLDDGVSIGKQLAERILQDGGE 298
Query: 303 NVF 305
+
Sbjct: 299 EIL 301
>gi|150024157|ref|YP_001294983.1| hydroxymethylbilane synthase [Flavobacterium psychrophilum
JIP02/86]
gi|149770698|emb|CAL42162.1| Hydroxymethylbilane synthase [Flavobacterium psychrophilum
JIP02/86]
Length = 308
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 96/303 (31%), Positives = 159/303 (52%), Gaps = 10/303 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK +IGTR S LAL A L D+ H II + ++GD I ++ L E+G
Sbjct: 1 MAKKTIKIGTRDSELALWQAHHVEKMLNDL----GHKTKIIAVKSQGDIILDKPLYELGI 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G+ID AVHS KD+PT L +G+ +A L R + +D+ + + +L
Sbjct: 57 TGIFTKTLDIAMVNGDIDIAVHSMKDVPTALPQGIVQAAVLERANEKDILVYNN--NLDF 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + I T SLRR+A L + V+D RG + TR+ KL +N + + A AG++R+
Sbjct: 115 LNTQATIATGSLRRQAQWLHKYPNHKVVDLRGNVNTRMQKLQDNNWNGAVFAAAGLERIN 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +N++ P+P QGA+ + N+ + + +NH +T + ER FL L
Sbjct: 175 IKPENY--INLDWMIPAPAQGAMMVVAMGNDTYCLDALAELNHIETEITTYIERQFLRTL 232
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C + I +A K T++F G++ + DG E+ + + +G A Q I
Sbjct: 233 EGGCTAPIGAYARFNEKDETIHFQGVLFSLDGSQKIEIKKIVEIQEWKQLGYHAGQEIFE 292
Query: 299 ISN 301
Sbjct: 293 NGG 295
>gi|330817976|ref|YP_004361681.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3]
gi|327370369|gb|AEA61725.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3]
Length = 323
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LAL A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLALWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G +S + RED RD F+S+ SL DL
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMSLPEGFVLSTVMSREDPRDAFVSNDYASLDDLPTG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GTSSLRR+A+L D V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AIVGTSSLRREAMLRAHYLDFDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++++E PP+ GQGA+ IE + + ++ T + ER L GSC
Sbjct: 191 IRALIDVETSPPAAGQGALGIEIAASRTDVARWLAPLHDSATALAAEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+A A G L G V + G V ++ +A+ +G+ + +
Sbjct: 251 SVPLAAHAIWHGERLELTGRVSNTSGTRVLTVRQDAAVTTPDEALALGKQVSDELERQGA 310
Query: 302 KNVFN 306
+
Sbjct: 311 FEIIE 315
>gi|193638791|ref|XP_001948145.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Acyrthosiphon
pisum]
gi|328705509|ref|XP_003242834.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Acyrthosiphon
pisum]
Length = 377
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 61/363 (16%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K R+G+R S LAL S L ++H P I+ ++T GDR+ ++ L +IG K
Sbjct: 6 RKTIRVGSRKSELALIQTKFVISQLKELH--PEIEFEIVSMTTMGDRVLDKPLPKIGEKS 63
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+++E L+SG +D VHS KD+PT + G I A L R+D RD + L
Sbjct: 64 LFTKDLEVALLSGTVDFIVHSLKDLPTVMEIGTTIGAILKRDDPRDALVLRDDCKEYQLD 123
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------AHAIL 170
L S IGTSSLRR A L R ++ V D RG + TRL KL++++ I+
Sbjct: 124 SLPSKSFIGTSSLRRTAQLKRKFPNLQVSDVRGNLNTRLKKLDSSQSTGDNTNTNYSGII 183
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AGI+R+ EK + +I++ + + GQGA+ +E + + E+++ ++H +T V
Sbjct: 184 LALAGIQRMGWEKRVSQIIDSDVMLYAVGQGALAVECRLGDDYILEMLEPLHHYETVLQV 243
Query: 231 NCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCD---- 284
ER FL L G C + + + + + G V + DG + S + D
Sbjct: 244 VAERGFLTRLGGGCSAPVGIRSTVCLTKNAMSLDGAVWSLDGAEELQYSSSAELADKKVI 303
Query: 285 -----------------------------------------AINIGRDAAQYIRFISNKN 303
A+ +G + A+ + +
Sbjct: 304 QSHIDQYRGEDGEPPKKCPYKQPRQFVGVTPGKISYLDLDTALKLGTELAENLISKGALD 363
Query: 304 VFN 306
+ N
Sbjct: 364 IMN 366
>gi|256845448|ref|ZP_05550906.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2]
gi|256719007|gb|EEU32562.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2]
Length = 302
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 149/303 (49%), Gaps = 7/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ G + F + L GK + + I AA+ I+
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAHMAAEEIKNKI 296
Query: 301 NKN 303
NK
Sbjct: 297 NKG 299
>gi|15644865|ref|NP_207035.1| porphobilinogen deaminase [Helicobacter pylori 26695]
gi|2495174|sp|P56140|HEM3_HELPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|2313328|gb|AAD07304.1| porphobilinogen deaminase (hemC) [Helicobacter pylori 26695]
Length = 306
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEKSAFCCRLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|154298906|ref|XP_001549874.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10]
gi|150857605|gb|EDN32797.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10]
Length = 379
Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 147/315 (46%), Gaps = 15/315 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LA+ + +++L H P N I L T GD+ L + G K L+
Sbjct: 52 TIHIGTRKSALAMVQTEQVKAALEKAH--PHLNFEITKLETMGDKNQVTALHDFGAKSLW 109
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L+ ++D VH KDMPT+L I A L RED RD I +SL +L
Sbjct: 110 THELEALLLDRKLDIVVHCLKDMPTQLPSKCIIGAILEREDPRDALIMKAGSNYKSLSEL 169
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
SV+GTSS+RR A + R ++ + RG I TRLNKL ++ K ++LA AG+ R+
Sbjct: 170 PAGSVVGTSSVRRSAQIARKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAGLLRM 229
Query: 180 KKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ I + L+ + + GQGA+ +E + + ++ + HE T + ER+
Sbjct: 230 GWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEIGTMISALQHEPTQLAGLAERS 289
Query: 236 FLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRD 291
+ L+G C I + + L IV++ DG E R DA G
Sbjct: 290 LMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGTESVESERLEEILTPKDADEFGWS 349
Query: 292 AAQYIRFISNKNVFN 306
AQ + +
Sbjct: 350 LAQDLVSKGAAKILE 364
>gi|171057453|ref|YP_001789802.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6]
gi|170774898|gb|ACB33037.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6]
Length = 322
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 8/307 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P I TR S LAL A R L H + ++ ++T+GD+I +R L+++GGKGL
Sbjct: 12 QPCIIATRESRLALWQAEHVRDLLQRRHGA---VVELLGMTTRGDQILDRALSKVGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L AVHS KD+P +L +G ++A L RED RD ++S+ + L
Sbjct: 69 FVKELEVALEEDRAQLAVHSLKDVPMELPEGFVLAAVLEREDPRDAWVSNHYDDVASLPQ 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR L R D+ + RG ++TRL KL+ I+LA AG+KRL +
Sbjct: 129 GARVGTSSLRRIVQLKAVRPDLEIHALRGNLDTRLRKLDEGLYDGIVLAAAGLKRLGLAQ 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +++ P+ GQGA+ IE + +E + + TW +V+ ERA L GS
Sbjct: 189 RIRSVIDPAVMLPAAGQGALGIEVRADASALREALAAMTDAPTWLAVHAERAVSRALGGS 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLAS-DGKI-FHEVSRNGNRCD---AINIGRDAAQYIRF 298
C +A FA +G+ L+ + D + S D A +G +R
Sbjct: 249 CSMPLAAFAQWQGAQLHLEARLGHPEDASVALIVASAEAAVTDTAGAEALGLAVVARLRA 308
Query: 299 ISNKNVF 305
+ +
Sbjct: 309 GGGEALL 315
>gi|296823866|ref|XP_002850512.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
gi|238838066|gb|EEQ27728.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
Length = 334
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 154/319 (48%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+P RIGTR S LA+ A + L + P H I L T GD+ N +L G K
Sbjct: 7 ANRPLRIGTRRSNLAIIQAKAIQDQLQKL--APEHTFEIEALHTIGDKDQNSSLYNFGAK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+T E+E+ L SG++D VH KDMPTKL ++A R+D RD I SL
Sbjct: 65 NLWTTELEELLTSGKLDVVVHCLKDMPTKLPDSCDLAAIPLRDDPRDALIVKVGLPYTSL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
+ L +V+GTSS+RR A L R ++ I+ RG +ETRL KL++ ++ I+++ G+
Sbjct: 125 QSLPEGAVVGTSSVRRSAQLCRLFPNLRFINIRGNVETRLAKLDDPQSEYTCIIMSACGL 184
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+R+ I + + +D + GQGAI +E + K L+ + + + ER
Sbjct: 185 ERVGLGYRINQRIGSKDGGILHAVGQGAIGLEVRKGDTKILHLLDQLVDHKSSLACLAER 244
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
A + L+G C I G TL GIV++ DG E S + + +A
Sbjct: 245 ALMRTLEGGCSVPIGVETEWIGDSEVYLTLRIRGIVISLDGSRSVEDSIDATVSTKDEAT 304
Query: 287 NIGRDAAQYIRFISNKNVF 305
+G++ A + +
Sbjct: 305 ALGQELAARLLEAGAATIL 323
>gi|210134437|ref|YP_002300876.1| porphobilinogen deaminase [Helicobacter pylori P12]
gi|226706287|sp|B6JKG8|HEM3_HELP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|210132405|gb|ACJ07396.1| porphobilinogen deaminase [Helicobacter pylori P12]
Length = 306
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++++ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C
Sbjct: 181 YRKAFSVKEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEKSAFCCRLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|146298706|ref|YP_001193297.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101]
gi|146153124|gb|ABQ03978.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101]
Length = 307
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 11/306 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RIGTR S LAL A L D+ + I+ + ++GD I ++ L E+G
Sbjct: 1 MAEKTIRIGTRDSELALWQAHNVEKKLNDL----GYKTSIVAVKSQGDIILDKPLYELGI 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +I+G+ID AVHS KD+PT L KG+ A LPR ++ D+ + D
Sbjct: 57 TGIFTKTLDIAMINGDIDIAVHSMKDVPTALPKGIVQGAVLPRANVLDILVHKGN---PD 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
S I T SLRR+A + +V+D RG + TR+ KL +N + A AG++R+
Sbjct: 114 FTNPSTIATGSLRRQAQWFNKYPNHTVVDLRGNVNTRMQKLQDNNWDGAVFAAAGLERIN 173
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +N++ P+P QGA+ + N+ + + +N +T + ER FL L
Sbjct: 174 LKPENY--INLDWMIPAPAQGAMLVVGMENDNYTLDALSQLNDIETEICTHIERQFLRTL 231
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C + I TL+F G++L+ DGK E+++ + + +G ++AQ I
Sbjct: 232 EGGCTAPIGALVTYNEDEDTLHFQGVLLSIDGKQKLEINKTVDISEWKKLGFNSAQEILN 291
Query: 299 ISNKNV 304
+
Sbjct: 292 NGGTEL 297
>gi|190345502|gb|EDK37399.2| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC
6260]
Length = 371
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 154/319 (48%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +IG R S LA+A + + L V K P I+ LST GD+I ++ L GGK
Sbjct: 8 TTKHIQIGGRKSTLAVAQSNIVKKHL--VAKFPQLKCSILALSTLGDQIQSQPLYSFGGK 65
Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
L+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV +
Sbjct: 66 ALWTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRSDPRDVLVMRKGS 125
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171
+SL +L +++GTSS+RR + L++ + RG I TR+ KL+ +LL
Sbjct: 126 KYKSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLL 185
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++R+ + I L+ D + GQGA+ +E + + ++L++ I T +
Sbjct: 186 AAAGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAIEDVPTSLCCH 245
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN---GNRCDAI 286
ER+ + L+G C I +T L F IV++ DG F E + +A
Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVEDKIEMKVTTKSEAD 305
Query: 287 NIGRDAAQYIRFISNKNVF 305
+G+ + K +
Sbjct: 306 ALGQQLGDKLIAKGAKEIL 324
>gi|238028332|ref|YP_002912563.1| Porphobilinogen deaminase [Burkholderia glumae BGR1]
gi|237877526|gb|ACR29859.1| Porphobilinogen deaminase [Burkholderia glumae BGR1]
Length = 322
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 158/305 (51%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL +L
Sbjct: 71 VKELETALADGRADLAVHSLKDVPMSLPEGFALTAVMRREDPRDAFVSNDYASLDELPTG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR+A+L DI V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 131 SIVGTSSLRREAMLRARYLDIDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ +E PP+ GQGA+ IE + + ++ T + ER L GSC
Sbjct: 191 IRSLIEVEASPPAAGQGALGIEIAAARAELARWLAPLHDPATALACEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A G L G V G A+ +GR A +
Sbjct: 251 EVPLAAHAVWDGDVLQLTGRVSNPSGTRVLNARARAAVSTPDAALALGRQVADELARQGA 310
Query: 302 KNVFN 306
+
Sbjct: 311 FEIVE 315
>gi|294507567|ref|YP_003571625.1| Porphobilinogen deaminase [Salinibacter ruber M8]
gi|294343895|emb|CBH24673.1| Porphobilinogen deaminase [Salinibacter ruber M8]
Length = 323
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 167/305 (54%), Gaps = 7/305 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +GTR S LAL A RS L H + + ++T+GD T+ ++EIG + +F
Sbjct: 6 PLVLGTRGSELALRQANVVRSRLEAA----GHRVELETITTRGDEATDTPISEIGDEAVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--LKDLA 122
T+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H + L DL
Sbjct: 62 TKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGHLHDLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ + T+SLRR A LL WRSD+ V+ RG ++TRL KL+ + ++LA AG+ RL
Sbjct: 122 EGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLSESDWTGMVLAVAGLVRLGLS 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELD 241
I++ ++ P+ GQGA+ I + ++L++ ++H + + N ERAFL ++
Sbjct: 182 LHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAFLKKVG 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ + +A+ TL + A DG + R D +GR+ A + +
Sbjct: 242 GGCQVPLGAWAHIDDGTLVLDACIAALDGSEHYRDERRCAPEDGAAVGRELAADLLAMGG 301
Query: 302 KNVFN 306
++ +
Sbjct: 302 DHILD 306
>gi|226354974|ref|YP_002784714.1| porphobilinogen deaminase [Deinococcus deserti VCD115]
gi|259647793|sp|C1CYD9|HEM3_DEIDV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226316964|gb|ACO44960.1| putative Porphobilinogen deaminase (PBG) (Hydroxymethylbilane
synthase) (HMBS) (Pre-uroporphyrinogen synthase)
[Deinococcus deserti VCD115]
Length = 311
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 108/308 (35%), Positives = 158/308 (51%), Gaps = 7/308 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGGK 61
+ +GTR S LALA + L + + P + I +STKGDR + + G K
Sbjct: 2 RTVTVGTRGSTLALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRNRESLEAMAQKGDK 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120
G + +EIE L+ ID AVHS KD+PT+ +GL++++ R D RDV I + L D
Sbjct: 60 GFWVKEIEDALLQKRIDIAVHSLKDLPTEQPEGLEVASIPKRVDARDVLIGKEGMKRLAD 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSS+RRKA L +R D+ VID RG I+TRL L ++ AI+LA AG+ R +
Sbjct: 120 LPQGARVGTSSVRRKAFLRAYRPDLQVIDLRGNIDTRLAALAGDEYDAIILAAAGLIRTE 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLA 238
I E + + P+PGQGA+ +ET N E+ I+ T D + ER FLA
Sbjct: 180 MRHRIDEFVEPDILLPAPGQGALALETRSGPENDLTIEVAYAIHDHGTDDRITAEREFLA 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L C + + A KG L G V A DG + G+ + +IG + A +
Sbjct: 240 GLGAGCMAPVGAHASIKGGVLTLEGWVGALDGSKVIRATSIGDPAECADIGAELAGDMLG 299
Query: 299 ISNKNVFN 306
+ + +
Sbjct: 300 QGAQALID 307
>gi|325262509|ref|ZP_08129246.1| hydroxymethylbilane synthase [Clostridium sp. D5]
gi|324032341|gb|EGB93619.1| hydroxymethylbilane synthase [Clostridium sp. D5]
Length = 293
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ A + + H P + ++ + T GD+I +++L IGGKGLF
Sbjct: 5 IRIGSRESRLAVIQAEIVKELIQKNH--PDIQVELVTMKTTGDKILDKSLELIGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++K L+ G ID +VHS KDMP ++ K L I+AY RED RD I ++ +
Sbjct: 63 KELDKALLEGSIDISVHSLKDMPMEIPKELPIAAYSKREDPRDALICRPGC--CEIPVDG 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR L + + + RG ++TRL KL +LA AG+ RL E VI
Sbjct: 121 VIGTSSRRRSLQLKKLYPECTFRQIRGNVQTRLRKLEEEGYDGTILAAAGLSRLNMEHVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
I + E+ P+ GQG + ++ + + ++ + ER F+A LDG C
Sbjct: 181 GRIFSTEEMIPAAGQGILAVQGRKGED--HFFLDCVENKKSRAEALAEREFVAVLDGGCT 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S +A A G+ L G+ + + +R GN DA +G A+ +R
Sbjct: 239 SPVAAHAEVNGNELKLTGLYYREEDDTYWTETRIGNTADARQLGAALAEEMRRR 292
>gi|240141705|ref|YP_002966185.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens AM1]
gi|240011682|gb|ACS42908.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens AM1]
Length = 294
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 112/292 (38%), Positives = 164/292 (56%), Gaps = 3/292 (1%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L +
Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLALHSVIGTSSLR 133
EID AVHS KD+ T L GL I+ L R+D RD F+S + L DL + +GTSSLR
Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+
Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMADVARSVLSVEE 178
Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A
Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238
Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
KG + G++ DG V R G DA IGR+A ++ + F
Sbjct: 239 VKGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGREAGAELKRAAGDVYF 290
>gi|317064836|ref|ZP_07929321.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
gi|313690512|gb|EFS27347.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
Length = 299
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 154/304 (50%), Gaps = 16/304 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTL 55
KK IG+R S LA+A + + L + P I + T GD +++L
Sbjct: 2 KKKIVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSL 59
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S +
Sbjct: 60 -----KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSG 114
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
++L +L +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG
Sbjct: 115 KTLMELPAGAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAG 174
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KR+ EK I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER
Sbjct: 175 LKRVGLEKEITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIERE 234
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
F DG C + + G + GI G+ + S + I + A
Sbjct: 235 FSKIFDGGCHTPMGCHCILDGDKITLTGIYFK--GENGYSASITEDAALGIKTAQKLADI 292
Query: 296 IRFI 299
I+
Sbjct: 293 IKEK 296
>gi|158421885|ref|YP_001523177.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571]
gi|158328774|dbj|BAF86259.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571]
Length = 313
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 121/300 (40%), Positives = 162/300 (54%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR SPLAL A R +L P +I I + T GD I +R L+E GGKGLFT+E
Sbjct: 14 IGTRGSPLALWQAHAVRDALAAALARPVESISITVIRTSGDSIQDRALSEAGGKGLFTKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE++L+ G ID AVHSAKDM T L GL +S +LPR D+RD I +SL DL + I
Sbjct: 74 IEEQLLDGRIDLAVHSAKDMATALPDGLFLSGFLPRADVRDALILREGKSLADLPAGARI 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+A L R R D+ V RG + TRL K+ LLA AG+ RL
Sbjct: 134 GTASLRREAQLRRLRPDLDVSLLRGNVHTRLAKVREGTFDGTLLALAGLTRLGLAHEASA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+ + F P+ GQGA+ IE+ V + + I T ++ ERA L LDGSC++
Sbjct: 194 VLDTDAFLPAVGQGAVAIESRVGDEATNGAIAAIACRATGIALAAERALLTALDGSCRTP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
I G A +G + G++L+ DG+ E DA +G D +R +
Sbjct: 254 IGGLATVEGDMVRLRGLILSPDGRDAAEADETAPVSDAARLGADMGARLRATAPARALGL 313
>gi|295109819|emb|CBL23772.1| hydroxymethylbilane synthase [Ruminococcus obeum A2-162]
Length = 308
Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats.
Identities = 97/298 (32%), Positives = 161/298 (54%), Gaps = 8/298 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG+R S LA+ + R + H P ++ I+ + T GD+I +RTL ++GGKG
Sbjct: 7 QNKVIIGSRESRLAVLQSEMVRDYIKTQH--PELDVEILTMKTTGDKILDRTLDKVGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++K L+ G +VHS KDMP ++ L + A+ RED RDV + S +L
Sbjct: 65 LFVKELDKALLEGRTMLSVHSLKDMPMEVPGELPLLAFSKREDPRDVLVLPEGVS--ELD 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L +G SSLRR L ++ V RG ++TRL KL+N + ++LA AG+KRL E
Sbjct: 123 LTKPLGCSSLRRTLQLKELYPEMEVKSIRGNLQTRLRKLDNGEYSGLILAAAGLKRLGLE 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + ++ P+ GQG + ++ + + ++ E W + + ERAF+ L+G
Sbjct: 183 NRICRYFSEDEILPAAGQGILAVQGRQD--LTYDYLEGYRDEKAWFAGSAERAFVKYLNG 240
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C S +A + +G L+ G+ DG+ + + S G + +A +GRD A+ ++ +
Sbjct: 241 GCSSPVAAYGVVEGDELFLRGLYYRECDGR-YFKDSIRGPKSEAEKLGRDLAKRMQDM 297
>gi|260494552|ref|ZP_05814682.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33]
gi|260197714|gb|EEW95231.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33]
Length = 302
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 148/303 (48%), Gaps = 7/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ N +++
Sbjct: 2 KKNIIIGSRGSILALAQADFIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDVSL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE+ L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQGLLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKIGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F
Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDKEIKEILKTIHNENVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ G + F V + GK + I AA+ I+
Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTA-VYSDKGKQ-IRAVIEDDLTKGKEIAYMAAEKIKNKI 296
Query: 301 NKN 303
NK
Sbjct: 297 NKG 299
>gi|328863687|gb|EGG12786.1| hypothetical protein MELLADRAFT_114915 [Melampsora larici-populina
98AG31]
Length = 430
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 106/333 (31%), Positives = 150/333 (45%), Gaps = 33/333 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR S LAL A R H P H I +ST GD+ R L +GGK L+
Sbjct: 44 PIVIGTRNSRLALVQAELVRKLFEISH--PNHPTTIQSMSTAGDQNQGRPLYLMGGKSLW 101
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121
T+E+E L+ G +D VH KDMPT L G ++ A L RED RD + +SL +L
Sbjct: 102 TKELEVALLEGSVDLIVHCLKDMPTSLPPGCELGAILEREDPRDALVIRRDLPFRSLSEL 161
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
SVIGTSS+RR A L R + D RG + TR KL ++ I+LA AG+ RL
Sbjct: 162 PAGSVIGTSSVRRVAQLRRRFPQLKFQDIRGNLNTRFRKLDAPDSPYTGIVLAVAGLNRL 221
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-------------AQELVKVINHEDT 226
+ I L+ + + GQGAI IE + ++LVK + H T
Sbjct: 222 ECADRISSYLSPPELYYAVGQGAIGIEIRSRAEEGEVTPRASQRTETVRQLVKSLEHWPT 281
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEV 276
+ ER+ L L+G C + + + L G+V + DG V
Sbjct: 282 ALVCHAERSLLRTLEGGCSVPVGVTSTLLPLPMPCQWAPQARLTLTGVVTSVDGTKEVMV 341
Query: 277 SRNGN---RCDAINIGRDAAQYIRFISNKNVFN 306
++ + D+I +G + A + +
Sbjct: 342 TKTADIYGPKDSIKLGCELAAELLEAGADEILE 374
>gi|328350818|emb|CCA37218.1| hydroxymethylbilane synthase [Pichia pastoris CBS 7435]
Length = 376
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 17/316 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LA+ A R + + + P ++ +ST GD++ N+ L GGK L+T
Sbjct: 47 LKLGSRKSALAIIQAEIVRQLI--LKEYPELETKLVSVSTLGDQVQNKALFTFGGKSLWT 104
Query: 66 EEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
+E+E L+ +ID VHS KDMPT L ++ + RED RD + +S
Sbjct: 105 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 164
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAG 175
L DL +V+GTSS+RR A LL+ + RG ++TRL KL +++ +LLA AG
Sbjct: 165 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 224
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R + I LN + S GQGA+ +E + + + + I H T ERA
Sbjct: 225 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 284
Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN---GNRCDAINIGR 290
L L+G C I T L +V++ +G+ S A + G
Sbjct: 285 LLRYLEGGCSVPIGVSTIYSEDTKELTMNSLVVSCNGRDSVTESMTEVVTTEEQAEDFGE 344
Query: 291 DAAQYIRFISNKNVFN 306
AQ + K + +
Sbjct: 345 RLAQKLIDQGAKRILD 360
>gi|294782423|ref|ZP_06747749.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA]
gi|294481064|gb|EFG28839.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA]
Length = 301
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 113/303 (37%), Positives = 149/303 (49%), Gaps = 7/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IGTR S LALA A ++SL + P I + T GD+ N +
Sbjct: 2 KKNIIIGTRGSILALAQANLVKTSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNASL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L
Sbjct: 60 KSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + + ++K I++E+ V ER F
Sbjct: 179 MADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNENIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ + F G + DGK V + I AA+ I+
Sbjct: 239 DGGCHTPMGCYSQVDEDKIKFIGAY-SHDGKQ-IRVVIEDDLAKGKEIAHMAAEEIKAKI 296
Query: 301 NKN 303
NK
Sbjct: 297 NKG 299
>gi|123210215|emb|CAM15095.1| hydroxymethylbilane synthase [Danio rerio]
Length = 358
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 111/336 (33%), Positives = 159/336 (47%), Gaps = 34/336 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K
Sbjct: 15 ASRVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEK 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L
Sbjct: 73 SLFTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTL 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177
L SVIGTSSLRR A L + + + RG + TRL KL+ AI+LA AG+K
Sbjct: 133 DSLPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLK 192
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL
Sbjct: 193 RMGWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFL 252
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR------------------- 278
+L+G C +A KGS LY G V + DG + +
Sbjct: 253 KQLEGGCSVPVAVHTEVKGSMLYLTGAVYSLDGADCLKDTMQTCVELDNKVNESTQRSAN 312
Query: 279 ---------NGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A +G D A + K++
Sbjct: 313 VGVTACNISSSALEAAEKLGLDLANVLLNKGAKDIL 348
>gi|83815900|ref|YP_445675.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855]
gi|83757294|gb|ABC45407.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855]
Length = 323
Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 165/305 (54%), Gaps = 7/305 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +GTR S LAL A RS L H + + ++T+GD T+ ++EIG + +F
Sbjct: 6 PLVLGTRGSELALRQANVVRSRLEAA----GHRVELETITTRGDEATDTPISEIGDEAVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--LKDLA 122
T+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H + L DL
Sbjct: 62 TKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGHLHDLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ + T+SLRR A LL WRSD+ V+ RG ++TRL KL + ++LA AG+ RL
Sbjct: 122 EGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLGESDWTGMVLAVAGLVRLGLS 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELD 241
I++ ++ P+ GQGA+ I + ++L++ ++H + + N ERAFL ++
Sbjct: 182 LHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAFLKKVG 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ + +A+ TL + A DG + R D +GR A + +
Sbjct: 242 GGCQVPLGAWAHIDDGTLVLDACIAALDGSEHYRDERRCAPEDGAAVGRKLAADLLAMGG 301
Query: 302 KNVFN 306
++ +
Sbjct: 302 DHILD 306
>gi|305665660|ref|YP_003861947.1| porphobilinogen deaminase [Maribacter sp. HTCC2170]
gi|88710417|gb|EAR02649.1| porphobilinogen deaminase [Maribacter sp. HTCC2170]
Length = 529
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 101/311 (32%), Positives = 152/311 (48%), Gaps = 13/311 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A ++ L + H ++P+ + GD + ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSELALWQANAVKNQLEAL----GHQTTLVPVKSTGDIVLDKPLYELGV 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G+ID AVHS KD+PT L KG+ +A L R + D+ + +
Sbjct: 56 TGIFTKTLDVAMLNGDIDIAVHSMKDVPTALPKGIVQAAVLKRANYLDILAYNDNEEFLG 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
++I T SLRRKA L +V+D RG I +R+ KLN+N + + A AG+ R+
Sbjct: 116 -GRDAIIATGSLRRKAQWLNRYPTHTVVDLRGNINSRMQKLNDNDWNGAIFAAAGLDRIG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + + P+P QGAI + N+ E +NHE T ER FL L
Sbjct: 175 LEHENT--IGLTWMVPAPAQGAIMVVALENDEYVLEACAQMNHEATEICTGLEREFLRIL 232
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C + I AY K + G++L+ DGK E N+ RD A I
Sbjct: 233 EGGCTAPIGALAYINKEEEVKLKGVLLSLDGKKRLEAEFAEPLGKHQNMARDCANSILAR 292
Query: 300 SNK----NVFN 306
K + N
Sbjct: 293 GGKRLMGEILN 303
>gi|198462481|ref|XP_001352446.2| GA21587 [Drosophila pseudoobscura pseudoobscura]
gi|198150842|gb|EAL29942.2| GA21587 [Drosophila pseudoobscura pseudoobscura]
Length = 630
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 149/297 (50%), Gaps = 16/297 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQRFEIHTMSTFGDRVLNVSLPKIGEK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++
Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQGHTI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA AG+
Sbjct: 122 ASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILAQAGL 181
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F
Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILAERSF 241
Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
L L G C + +A ++ +G L G V + DG I + +
Sbjct: 242 LKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAIEIRNHLSCALSE 298
>gi|56416851|ref|YP_153925.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries]
gi|56388083|gb|AAV86670.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries]
Length = 303
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 2/298 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG
Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDIKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+GSC + +A A S L +LA D + R DA ++G + ++
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVSAERTFPERDAESVGFEMGVMLKD 296
>gi|325282435|ref|YP_004254976.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP]
gi|324314244|gb|ADY25359.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP]
Length = 310
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGGK 61
+ +GTR S LAL+ L + + P I ++TKGD+ ++ + G K
Sbjct: 2 RTVTVGTRGSTLALSQTRWVVERLKE--QWPETEFRIQTITTKGDKNRASLQSMAKAGDK 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120
G + +EI+ L++ ID AVHS KD+PT+ +GL I++ R D RDV + +SL D
Sbjct: 60 GFWIKEIQDALLAKSIDIAVHSLKDLPTEQTEGLDIASIPKRADARDVLVGAEGFKSLAD 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RR+A L +R D+ VI RG IETR+ + ++ A++LA AG+ R
Sbjct: 120 LPQGARIGTSSVRRRAFLKAFRPDLQVIPVRGNIETRMAAVASDDYDAVILAGAGLIRTD 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E ++ + P+PGQGA+ +E ++ E+ IN T D + ER FLA L
Sbjct: 180 QRHRADEFVSTDILLPAPGQGALALEVRADDDLIAEVAYAINDAVTDDRITAEREFLAGL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + + FA KG L G V A DG + + +G+ + ++G + A+ +
Sbjct: 240 GAGCLAPVGAFATVKGDLLTLEGWVGAVDGSEVIKATTSGDASECADLGAELAEDMLSQG 299
Query: 301 NKNVFNF 307
+ +
Sbjct: 300 AQRLIEM 306
>gi|222475216|ref|YP_002563632.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida]
gi|255003192|ref|ZP_05278156.1| porphobilinogen deaminase [Anaplasma marginale str. Puerto Rico]
gi|269958734|ref|YP_003328521.1| porphobilinogen deaminase [Anaplasma centrale str. Israel]
gi|222419353|gb|ACM49376.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida]
gi|269848563|gb|ACZ49207.1| porphobilinogen deaminase [Anaplasma centrale str. Israel]
Length = 303
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 2/298 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG
Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+GSC + +A A S L +LA D + R DA ++G + ++
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVSAERTFPERDAESVGFEMGVMLKD 296
>gi|156064079|ref|XP_001597961.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980]
gi|154690909|gb|EDN90647.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 379
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 146/315 (46%), Gaps = 15/315 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LA+ + +++L H P N I L T GD+ L + G K L+
Sbjct: 52 TIHIGTRKSALAMVQTEQVKAALEKAH--PNLNFEITKLETMGDKNQVTALHDFGAKSLW 109
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L+ +D VH KDMPT+L + I A L RED RD I ++L +L
Sbjct: 110 THELEALLLERNLDIVVHCLKDMPTQLPQKCTIGAILEREDPRDALIMKAGSNYKTLSEL 169
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
SV+GTSS+RR A + ++ + RG I TRLNKL ++ K ++LA AG+ R+
Sbjct: 170 PAGSVVGTSSVRRSAQIAMKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAGLLRM 229
Query: 180 KKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ I + L+ + + GQGA+ +E + + +V + HE T + ER+
Sbjct: 230 GWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEINTMVSALQHEPTQLAGLAERS 289
Query: 236 FLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRD 291
+ L+G C I + + L IV++ DG E R DA G
Sbjct: 290 LMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGTESVESERLEEILTPKDADEFGWT 349
Query: 292 AAQYIRFISNKNVFN 306
AQ + +
Sbjct: 350 IAQDLVSKGAAKILE 364
>gi|168703144|ref|ZP_02735421.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246]
Length = 299
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 102/297 (34%), Positives = 155/297 (52%), Gaps = 2/297 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P ++GTR SPLAL A L V + P + ++ + T GDR L+ +GG G+F
Sbjct: 4 PLKLGTRGSPLALWQANYIAELLRPV--VAPRPVELVLIETHGDRDQASALSAMGGFGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ I+ L+ G D AVHS KD+PT L+++A PR D F+S + DL
Sbjct: 62 TKAIQNALLDGRADVAVHSLKDLPTIPEPRLELAAVPPRGPTGDAFVSRKHKRFDDLHPG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A +L R D+ ++D RG ++TRL KL++ AI+LA AG+ RL
Sbjct: 122 ATVGTSSLRRRAQVLNRRPDLKLLDLRGNVDTRLRKLDDLGLDAIVLAEAGLARLGLADR 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I EIL+ P+ GQGAI +E ++ + + ++ + E T+ V ERA L L G C
Sbjct: 182 ITEILDPSWMLPAVGQGAIGLECRSDDGETKLVLAQVRCESTFARVQAERAMLYALGGGC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
I + L G VL+ DG+ + G +++G++ A +
Sbjct: 242 LVPIGATSKVLDGVLTVRGAVLSPDGRRRIVGTHEGLMRAPLSVGQELAGILLAEGA 298
>gi|254564213|ref|YP_003071308.1| Porphobilinogen deaminase [Methylobacterium extorquens DM4]
gi|254271491|emb|CAX27506.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens DM4]
Length = 294
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 112/292 (38%), Positives = 163/292 (55%), Gaps = 3/292 (1%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L +
Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLALHSVIGTSSLR 133
EID AVHS KD+ T L GL I+ L R+D RD F+S + L DL + +GTSSLR
Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+
Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMANVARSVLSVEE 178
Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A
Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238
Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G + G++ DG V R G DA IGRDA ++ + F
Sbjct: 239 VSGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGRDAGAELKRAAGDVYF 290
>gi|255004322|ref|ZP_05279123.1| porphobilinogen deaminase [Anaplasma marginale str. Virginia]
Length = 303
Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats.
Identities = 100/298 (33%), Positives = 162/298 (54%), Gaps = 2/298 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ + P + + + T GD +R L +IGG
Sbjct: 1 MHAPVVRLGTRGSTLALIQAEEVKAAIAA--RFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+GSC + +A A S L +LA D + R DA ++G + ++
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVFAERTFPERDAESVGFEMGVMLKD 296
>gi|254995040|ref|ZP_05277230.1| porphobilinogen deaminase [Anaplasma marginale str. Mississippi]
Length = 303
Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats.
Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 2/298 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG
Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+GSC + +A A S L +LA D + R DA ++G + ++
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVFAERTFPERDAESVGFEMGVMLKD 296
>gi|195586907|ref|XP_002083209.1| GD13613 [Drosophila simulans]
gi|194195218|gb|EDX08794.1| GD13613 [Drosophila simulans]
Length = 651
Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++
Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 122 ASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F
Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241
Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L L G C + +A ++ KG L G V + DG I +
Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE--- 298
Query: 288 IGRDAAQYIRFISNKN 303
+ R +
Sbjct: 299 --QKLEGDQRKRGAQE 312
>gi|313680762|ref|YP_004058501.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977]
gi|313153477|gb|ADR37328.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977]
Length = 303
Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 147/303 (48%), Gaps = 8/303 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LAL L + P I + TKGDR + I
Sbjct: 2 RVIVVGTRGSLLALTQTRWAVERLKE--NWPETEFKIKTIQTKGDRGADPREQNI----- 54
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F E+E+ L GEID AVHS KD+PT +GL I+ R D RDVFI + DL
Sbjct: 55 FVGELEEALRRGEIDIAVHSLKDLPTTQPEGLVIAGVPRRVDPRDVFIGRNSVARMADLP 114
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSS+RR+A LL WR D+ ++ RG +++RL +L + I+LA AG+ RL+
Sbjct: 115 KGARIGTSSVRRRAQLLAWRDDLEIVPLRGNVDSRLKRLVSEDLDGIILAAAGLLRLEMR 174
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E ++ E P+PGQGA+ +E + A EL +NH T V ER FL L
Sbjct: 175 NRIGEFVDPEILLPAPGQGALALEVREGDDMADELAYSLNHAPTRARVLAERGFLHGLGA 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + + A + L VL+ DGK G+ +A +G + A+ + +
Sbjct: 235 GCLAPVGALAQIEDDVLVLDAGVLSLDGKTLIRGEIEGDPEEAWELGLELARDVLEAGGR 294
Query: 303 NVF 305
V
Sbjct: 295 EVL 297
>gi|41056087|ref|NP_957448.1| hydroxymethylbilane synthase a [Danio rerio]
gi|31419559|gb|AAH53268.1| Hydroxymethylbilane synthase a [Danio rerio]
Length = 358
Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats.
Identities = 111/336 (33%), Positives = 158/336 (47%), Gaps = 34/336 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA +L ++ P + I+ +ST GD+I + L++IG K
Sbjct: 15 ASRVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVRLEIVAMSTIGDKILDTALSKIGEK 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L
Sbjct: 73 SLFTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTL 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177
L SVIGTSSLRR A L + + + RG + TRL KL+ AI+LA AG+K
Sbjct: 133 DSLPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLK 192
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL
Sbjct: 193 RMGWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFL 252
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR------------------- 278
+L+G C +A KGS LY G V + DG + +
Sbjct: 253 KQLEGGCSVPVAVHTEVKGSMLYLTGAVYSLDGADCLKDTMQTCVELDNKVNESTQRSAN 312
Query: 279 ---------NGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A +G D A + K++
Sbjct: 313 VGVTACNISSSALEAAEKLGLDLANVLLNKGAKDIL 348
>gi|34762659|ref|ZP_00143651.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887680|gb|EAA24757.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 302
Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 149/303 (49%), Gaps = 7/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ G + F + L GK + + I AA+ I+
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAYMAAEEIKNKI 296
Query: 301 NKN 303
NK
Sbjct: 297 NKG 299
>gi|194864825|ref|XP_001971126.1| GG14785 [Drosophila erecta]
gi|190652909|gb|EDV50152.1| GG14785 [Drosophila erecta]
Length = 650
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 151/316 (47%), Gaps = 21/316 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 4 QENVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++
Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRDNFKGHTI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 122 ASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F
Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241
Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L L G C + +A ++ KG L G V + DG I +
Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE--- 298
Query: 288 IGRDAAQYIRFISNKN 303
+ R +
Sbjct: 299 --QKLEGEQRKRGAQE 312
>gi|317122098|ref|YP_004102101.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885]
gi|315592078|gb|ADU51374.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885]
Length = 335
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 111/322 (34%), Positives = 168/322 (52%), Gaps = 19/322 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LA A L H P + ++P++T GDR R L +
Sbjct: 1 MTAPVVRIGTRASALARIQAQWVARELQRHH--PGLQVELVPVTTHGDRHRARPLYTLDT 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117
G F +E+E+ L +G ID AVHSAKD+PT+L +GL+++A+ RED D + +Q
Sbjct: 59 PGAFVKELEEALRAGIIDLAVHSAKDVPTRLPEGLELAAFPQREDPGDALVLPRSQEGLG 118
Query: 118 --------------LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN 163
L+ L + +GTSSLRR+A L R D+ V RG ++TRL +L+
Sbjct: 119 PNGRDAGRGAGMTALELLPPGARVGTSSLRRQAWLRARRPDLKVEPARGNLDTRLRRLDE 178
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A++LA AG++RL I + P+PGQGA+ +E ++ + LV+V++
Sbjct: 179 GAWDALVLAAAGLRRLGVGHRITAAIPPRALLPAPGQGALAVEIRASDDATRRLVQVLDR 238
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ +V ERAFLAEL G+C+ + +A +G L G+V A DG + E G
Sbjct: 239 PEVALAVRAERAFLAELGGTCRIPLGAWARLEGPRLRLAGMVAAPDGDPWLEEEVEGPAT 298
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
D +GR+ A+ +R ++V
Sbjct: 299 DPEAVGRELAERLRARGAESVL 320
>gi|269926448|ref|YP_003323071.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798]
gi|269790108|gb|ACZ42249.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798]
Length = 300
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 88/297 (29%), Positives = 150/297 (50%), Gaps = 4/297 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LAL + L ++ P + + DR + ++ IG G+
Sbjct: 2 KVIKVGTRGSKLALWQTQWVINRLRSLY--PGFQFEPVVIKVTSDRSPDAPISAIGQVGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT++IE+ L++G+I AVHS KD+PT G I+A+ RED RD + Q + DL
Sbjct: 60 FTKDIEQALLAGDIHLAVHSLKDLPTLSTPGTVIAAFTEREDPRDCILWPKGQPMPDLN- 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+S +GTSS+RR AL+ + + +V++ RG ++TR+ K+ +L+AYA +KR+
Sbjct: 119 NSRVGTSSVRRSALVRSYWPNANVVNLRGNVDTRVRKMLEGNYDVVLMAYAAVKRMDL-P 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + L ++ + PS GQG I ++ ++ + ++ IN + + ER+ + L G
Sbjct: 178 VEFKPLPLDSWVPSAGQGIIAVQAREDDQQIIGMLNAINFFPSKVAYLAERSLMRALGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + +A L G+V A DG R A ++G A+ + +
Sbjct: 238 CSMPVGAYAELHDGELSLIGMVAAPDGSQVVITRRVDTPDQADHLGERVAREMLDLG 294
>gi|294785256|ref|ZP_06750544.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27]
gi|294486970|gb|EFG34332.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27]
Length = 302
Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 148/303 (48%), Gaps = 7/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ G + F + L GK + + I A + I+
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLTKGKEIAYMATEEIKNKI 296
Query: 301 NKN 303
NK
Sbjct: 297 NKG 299
>gi|238926756|ref|ZP_04658516.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531]
gi|238885288|gb|EEQ48926.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531]
Length = 289
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 95/283 (33%), Positives = 151/283 (53%), Gaps = 3/283 (1%)
Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83
++ H P + + L+TKGDRI + L +IGGKGLFT+E+E+ ++ +D AVHS
Sbjct: 2 AEAIKKEH--PSCCVELHELTTKGDRILDAPLAKIGGKGLFTKELEQAMLDDAVDLAVHS 59
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KDMPT++ GL I A R D D F+S +++DL + + +GTSSLRR+A LL R
Sbjct: 60 LKDMPTEVPDGLVIGAITTRLDPGDAFVSAHYAAVEDLPVGARVGTSSLRRRAQLLAVRP 119
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
D+++ D RG + TRL KL+ + AI+LA AG+KRL E+ I+ IL P+ GQGA+
Sbjct: 120 DLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLGFERRIRTILPRSVMLPAVGQGAL 179
Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFY 262
IE + ++ + + ERAFL ++G C+ + +A +
Sbjct: 180 AIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRVEGGCQIPVGVYAEVDANGQISID 239
Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
++ + DG+ +G A +G A+ + + +
Sbjct: 240 AMIASVDGQRICRSDAHGAGEQAEALGTALAEELLDAGGREIL 282
>gi|154245106|ref|YP_001416064.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2]
gi|154159191|gb|ABS66407.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2]
Length = 317
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 121/302 (40%), Positives = 172/302 (56%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL A +++L + I + + T GD+I +R L+E GGKGLFT
Sbjct: 16 LRIGTRGSPLALWQAHAVQAALAVALGVEKEAIAVEVIKTSGDQIQDRALSEAGGKGLFT 75
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G +D AVHSAKD+ T L GL ++ YLPR D+RD I + +L DL +
Sbjct: 76 KEIEEALLDGRVDLAVHSAKDVATVLPDGLHLAGYLPRADVRDALILKSGAALADLPAGA 135
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRR+A L R R D+ V RG + TRL K+ + A LLA AG+ RL +
Sbjct: 136 KVGTASLRREAQLRRIRPDLKVELLRGNVHTRLAKVKDGDFDATLLALAGLTRLGMAQAA 195
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L +DF P+ GQGA+ IE + +P + I DT ++ ERAFLA LDGSC+
Sbjct: 196 SCVLATDDFLPAVGQGAVAIECRIADPDTNAAIAAIACRDTGIALEAERAFLAALDGSCR 255
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G ++ G+VL+ DG E++ DA +G + +R +
Sbjct: 256 TPIAGLATVEGESVRLRGLVLSPDGSDAAEIAELAPIADAARLGAECGARLRTSAPARAL 315
Query: 306 NF 307
Sbjct: 316 GL 317
>gi|19703980|ref|NP_603542.1| porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|25453023|sp|Q8RFP5|HEM3_FUSNN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|19714161|gb|AAL94841.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 298
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 109/299 (36%), Positives = 145/299 (48%), Gaps = 7/299 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L P + I + T GD+ N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLVKDRLQ--GNYPNLSFEIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ GEID AVHS KDMP K L A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGEIDIAVHSMKDMPAVSAKSLICGAIPDREDPRDVLVSKNGL-LVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F + L GK + I AA+ I+
Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTAVYLDE-GKQ-IRAVVEDDLAKGKEIAYMAAEEIKNK 295
>gi|260588741|ref|ZP_05854654.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583]
gi|260540923|gb|EEX21492.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583]
Length = 296
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 6/297 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IG+R S LA+ + R + + + I+ + T GD+I +RTL +IGGKGL
Sbjct: 2 RKVVIGSRESKLAVVQSEMVRDYIRE--NNADIQVEILTMKTTGDKILDRTLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + L
Sbjct: 60 FVKELDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLVLPKGVT--QLDT 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E
Sbjct: 118 SKPIGCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLED 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E+ P+ GQG + I+ + +K E+ + ERAF+ L+G
Sbjct: 178 RIARYFEPEEMIPAAGQGILAIQGRKDVDY--SYLKGYGDENATYAALAERAFVRYLNGG 235
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C S +A A + + G+ + + + + G+ A +G A+ ++ S
Sbjct: 236 CSSPVAAHARVEDGQIILRGLYYDENTGNYEKGLKKGSAEAAEELGISLAKELQERS 292
>gi|209155902|gb|ACI34183.1| Porphobilinogen deaminase [Salmo salar]
Length = 358
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 108/334 (32%), Positives = 155/334 (46%), Gaps = 33/334 (9%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K
Sbjct: 17 NRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE D + H +L
Sbjct: 75 LFTKELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLD 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKR 178
L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 135 TLPDGSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKR 194
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + ++L ED + GQGA+ +E + E+V ++H +T ERAFL
Sbjct: 195 MGWEARVSQVLGPEDCMYAVGQGALAVEVRARDCDILEMVSTLHHSETVLRCIAERAFLR 254
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCD--------- 284
L+G C +A K S L G V + DG + + GN+ +
Sbjct: 255 RLEGGCSVPVAVNTEVKDSVLSLTGAVYSLDGADSLKEAMETNVDPGNKLESAADIQHVG 314
Query: 285 -------------AINIGRDAAQYIRFISNKNVF 305
A +G D A + +
Sbjct: 315 VTAHNVPQCAQVAAEKLGVDLADLLLSKGAMEIL 348
>gi|195336557|ref|XP_002034902.1| GM14404 [Drosophila sechellia]
gi|194127995|gb|EDW50038.1| GM14404 [Drosophila sechellia]
Length = 651
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++
Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 122 ASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F
Sbjct: 182 LRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241
Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L L G C + +A ++ KG L G V + DG I +
Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNQNSQELGLSLTGAVWSLDGAIEIRNHLACALNE--- 298
Query: 288 IGRDAAQYIRFISNKN 303
+ R +
Sbjct: 299 --QKLEGDQRKRGAQE 312
>gi|255715311|ref|XP_002553937.1| KLTH0E10604p [Lachancea thermotolerans]
gi|238935319|emb|CAR23500.1| KLTH0E10604p [Lachancea thermotolerans]
Length = 336
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E + RIG R S LA+ + E + + + ++ + L T GD++ ++ L GGK
Sbjct: 10 EHQIVRIGGRKSKLAVIQSHEVKDLIER--EFSQYSCTVRALKTLGDQVQSKPLYSFGGK 67
Query: 62 GLFTEEIEKKLISG----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--- 114
++T+E+E L ID VHS KDMPT L G + A + R D D I
Sbjct: 68 AVWTKELEDLLYEKDKEKRIDLIVHSLKDMPTLLPDGFLVGAIIKRVDPTDCIIMAKESP 127
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLA 172
++L DL SV+GTSS+RR A L R + RG IETRL+KL++ I+LA
Sbjct: 128 YKTLDDLPDGSVVGTSSIRRSAQLKRKYPKLVFESVRGNIETRLSKLDDPITPFSCIVLA 187
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ R+K I + L+ + GQGA+ IE ++P +++ IN ++T
Sbjct: 188 TAGLLRVKLAHRITQRLDSSVMYHAVGQGALGIEIRSDDPWIAGILQKINDKETAICCFA 247
Query: 233 ERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVS----RNGNRCDAI 286
ER+ + L+G C I + L +V++ DG E R DAI
Sbjct: 248 ERSLMRTLEGGCSVPIGVESNYDDTTKQLCLKAVVVSVDGTEAVEDEYTMTIEDMRQDAI 307
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G+ A + K++ +
Sbjct: 308 ICGQQLAHKMIKNGAKDILD 327
>gi|262067556|ref|ZP_06027168.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC
33693]
gi|291378731|gb|EFE86249.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC
33693]
Length = 302
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 108/295 (36%), Positives = 149/295 (50%), Gaps = 7/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK +G+R S LALA A +++L + P + I + T GD+ N +++
Sbjct: 2 KKNIIMGSRGSILALAQANLVKNNLEANY--PELSFEIKEIVTSGDKDLKSNWENSDVSL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAVSPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPKGAKIGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
DG C + + ++ G + F V + +GK + N I AA+
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IKAVVEDNLAKGKEIAYMAAEE 291
>gi|20130425|ref|NP_612103.1| lethal (3) 02640 [Drosophila melanogaster]
gi|7292071|gb|AAF47484.1| lethal (3) 02640 [Drosophila melanogaster]
gi|77403925|gb|ABA81841.1| GH16723p [Drosophila melanogaster]
gi|211938543|gb|ACJ13168.1| FI03834p [Drosophila melanogaster]
gi|220951602|gb|ACL88344.1| l(3)02640-PA [synthetic construct]
Length = 652
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++
Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 122 ASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F
Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241
Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L L G C + +A ++ KG L G V + DG I +
Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE--- 298
Query: 288 IGRDAAQYIRFISNKN 303
+ R +
Sbjct: 299 --QKLEGDQRKRGAQE 312
>gi|292670850|ref|ZP_06604276.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541]
gi|292647471|gb|EFF65443.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541]
Length = 271
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 94/264 (35%), Positives = 151/264 (57%), Gaps = 1/264 (0%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++TKGDRI + L +IGGKGLFT+E+E+ +++G+ID AVHS KDMPT++ KGL I A
Sbjct: 1 MTTKGDRILDAPLAKIGGKGLFTKELEQAMLAGQIDIAVHSLKDMPTEIPKGLIIGAITK 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
R D D F+S S+++L + + +GTSSLRR+A LL R D+ ++D RG + TRL KL+
Sbjct: 61 RLDPGDAFVSVNYTSIEELPIGAKVGTSSLRRRAQLLAVRPDLQLLDLRGNVNTRLAKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+KRL I+ IL+ P+ GQG + IE ++ + ++ ++
Sbjct: 121 AGDFDAIILAAAGLKRLGLGNRIRSILSQRMMLPAVGQGTLAIECRADDTRILSVIDFLH 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN 281
+ + ERAFL ++G C+ + +A + L+ ++ + DG G+
Sbjct: 181 DRNMSAAAMAERAFLCRVEGGCQIPVGVYADLKEDGLLHVDAMIASVDGMRVCRSRCTGS 240
Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305
A +G A+ + + +
Sbjct: 241 AERAEELGISLAEELLDAGGREIL 264
>gi|169762720|ref|XP_001727260.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83770288|dbj|BAE60421.1| unnamed protein product [Aspergillus oryzae]
Length = 330
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 157/315 (49%), Gaps = 13/315 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R+ L + P + I L T GDR L G K
Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRNCLQKI--APDRSFEIEALRTLGDRDQLTALYNFGAKS 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
L+T E+E+KL +GE+D VH KDMPT L +++A PR+D RD I SLK
Sbjct: 66 LWTTELEEKLNAGELDVIVHCLKDMPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSLK 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
L +V+GTSS+RR A L R + + RG +ETRL K++ +++ ++++ AG++
Sbjct: 126 SLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDNSDSEYTCMVMSAAGLE 185
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ E I + L +D + GQGA+ +E + K QEL+ + + + + ER+
Sbjct: 186 RVGLEHRISQYLGSKDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQQSTLACLAERS 245
Query: 236 FLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRD 291
+ L+G C + I L + IV++ DG E + N +A +G++
Sbjct: 246 LMRTLEGGCSAPIGVETEWISAGALSIHAIVVSLDGTKSVEDTIVSNVKTVEEATALGKE 305
Query: 292 AAQYIRFISNKNVFN 306
A + + N
Sbjct: 306 LAARLVKAGAGEILN 320
>gi|237742175|ref|ZP_04572656.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13]
gi|229429823|gb|EEO40035.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13]
Length = 302
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 148/303 (48%), Gaps = 7/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
KK IG+R S LALA A + L + P I + T GD+ N ++I
Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ G + F + L GK + + I A + I+
Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAHMATEEIKNKI 296
Query: 301 NKN 303
NK
Sbjct: 297 NKG 299
>gi|161527999|ref|YP_001581825.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1]
gi|238054422|sp|A9A1A1|HEM3_NITMS RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|160339300|gb|ABX12387.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1]
Length = 311
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ +G R S L++A + L H P I ++TKGD + R L I KG+F
Sbjct: 2 KYIVGARGSQLSVAQTNLVIAELKKAH--PDTEYEIKTITTKGDTDS-RPLFTIDQKGIF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI++ + E+D AVHS KD+P++L L ++ RE + DVFIS +L +
Sbjct: 59 EKEIDRAVAQKEVDFAVHSLKDVPSELDDNLVLACIPKRETVNDVFISPDGSTLDSIKPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSSLRR + R R D++V RG IETR+ K + AI+LA AGI RL V
Sbjct: 119 SVIGTSSLRRAVQVSRKRPDVTVKPIRGNIETRIKKASGENYDAIVLAKAGISRLGV-DV 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L+ +DF PSPGQGAI I ++ K E++K I D+ + ERA +D C
Sbjct: 178 KYTELSTDDFSPSPGQGAIAIVARADDSKTIEMLKKIEDPDSRLEIEAERALSDFVDSGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + +A GS + + DGK F VS+ G++ + ++G+ A + +R ++
Sbjct: 238 RFPVGAYAKSNGSEMTLTVTAFSVDGKQFLHVSKTGDKNNPKSLGQSAGEELREKGVNDL 297
Query: 305 -FNF 307
N+
Sbjct: 298 ALNW 301
>gi|91205161|ref|YP_537516.1| porphobilinogen deaminase [Rickettsia bellii RML369-C]
gi|157827501|ref|YP_001496565.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389]
gi|122990935|sp|Q1RJN7|HEM3_RICBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217782|sp|A8GXC8|HEM3_RICB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91068705|gb|ABE04427.1| Porphobilinogen deaminase [Rickettsia bellii RML369-C]
gi|157802805|gb|ABV79528.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389]
Length = 300
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 109/294 (37%), Positives = 161/294 (54%), Gaps = 4/294 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + P N I+ ++T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSKLALTQTNLVIEQIKQ--HFPNINCEIVEITTSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++ ++D AVHS KD+P + K L I A L RED RDVF+ T +S+++L ++
Sbjct: 63 KEIEQALLNKKVDLAVHSLKDVPGIIPKDLSIEAVLEREDSRDVFVCLTHKSIEELPKNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIGTSS+RRK + R R D+ +I FRG +++R+NKL N + A +LAYAG+KRL
Sbjct: 123 VIGTSSVRRKLCVQRMRPDLEIIVFRGNVDSRINKLINKEVDATILAYAGLKRLNAFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I IE ++ E+ K INH T++ + ERA L LD +C
Sbjct: 183 YCHLIEHSQMLPCIGQGVIAIEIRKDDHDMIEICKQINHLPTFELIKPERALLEYLDANC 242
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
++ I ++ Y + ++ DG + N + G AA+ +
Sbjct: 243 RTPIGAYSKYLDNGDIQTDFMLGNLDGSKIAFHTEISNPKTSKESGIKAAKVML 296
>gi|331084091|ref|ZP_08333198.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330402453|gb|EGG82023.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 296
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 6/297 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IG+R S LA+ + R + + + I+ + T GD+I +RTL +IGGKGL
Sbjct: 2 RKVVIGSRESKLAVVQSEMVRDYIRE--NNADIQVEILTMKTTGDKILDRTLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + L
Sbjct: 60 FVKELDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLVLPKGVT--QLDT 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E
Sbjct: 118 SKPIGCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLED 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E+ P+ GQG + I+ + +K E+ + ERAF+ L+G
Sbjct: 178 RIARYFEPEEMIPAAGQGILAIQGRKDVDY--SYLKGYGDENATYAALAERAFVRYLNGG 235
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C S +A A + + G+ + + + + G+ A +G A+ ++ S
Sbjct: 236 CSSPVAAHARVEDGQIILRGLYYDENTGNYEKGLKKGSAEAAEELGISLAKELQERS 292
>gi|307728969|ref|YP_003906193.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003]
gi|307583504|gb|ADN56902.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003]
Length = 307
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 155/292 (53%), Gaps = 5/292 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A + +L ++ P + I+ ++T+GD+I +RTL+++GGKGLF +E+E L G
Sbjct: 1 MWQAEHVQCALHKLY--PSCEVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P +L G +S + RED RD +S+ SL L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMELPPGFALSTIMEREDPRDALVSNHYDSLAALPAGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L + V RG ++TRL KL+ AI+LA AG+KRL I+ +L+ +D P
Sbjct: 119 MLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDRIRALLDPQDSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + ++HE T +V ER L GSC+ +A +A
Sbjct: 179 AAGQGALGIEIRADRADLAAWLTPLHHEHTAAAVEAERMVSRALGGSCEVPLAAYAEWHD 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305
L+ G+V DG+ + A+ +GR+ A + +
Sbjct: 239 GALHLRGVVATPDGRRVLSAQASAPAPTVERAVALGREVANALEQQGAMEIV 290
>gi|86133880|ref|ZP_01052462.1| Porphobilinogen deaminase [Polaribacter sp. MED152]
gi|85820743|gb|EAQ41890.1| Porphobilinogen deaminase [Polaribacter sp. MED152]
Length = 530
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 10/306 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K RIGTR S LAL A + R L ++ + I+P+ + GD I ++ L E+G G
Sbjct: 2 QKTIRIGTRESQLALWQANKVRKQLEEL----GYETEIVPIKSTGDIILDKPLYELGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L++ +ID AVHS KD+PT L +G+ A L R + D+ + +
Sbjct: 58 IFTKNLDIALLNEDIDIAVHSLKDVPTALPEGIMQGAVLKRANYSDLLVLKDTEEFFGQP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKK 181
+I T SLRRKA+ L V D RG + TRL+KL N++ + + A AG++RL
Sbjct: 118 -GGIIATGSLRRKAMWLNRYPTHKVEDLRGNVNTRLSKLENSETWNGAIFAAAGLERLGL 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
K + + P+P QGAI + + + + +NH +T V ER FL L+
Sbjct: 177 --REKGAIPLTWMIPAPAQGAIMLACLEKDQFVIDACEQLNHYETKVCVGIEREFLRLLE 234
Query: 242 GSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C + I AY T + F GI+L DG V++ + +D A Y+
Sbjct: 235 GGCTAPIGALAYVDEKTQEINFKGILLKRDGSKKITVTKTAKLGSHRYLAKDCADYVINR 294
Query: 300 SNKNVF 305
K +
Sbjct: 295 GGKELI 300
>gi|310658305|ref|YP_003936026.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Clostridium sticklandii DSM 519]
gi|308825083|emb|CBH21121.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Clostridium sticklandii]
Length = 304
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 4/295 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL + L ++ P + I + TKGD+I + L ++ KG+F
Sbjct: 2 KIIVGSRGSQLALTQTKLIVNELSKLN--PNVDFEIKVIKTKGDKIQDIPLDKMNDKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122
+EIE++LIS EID AVHS KDMPTK+ + L RED RD I L+DL+
Sbjct: 60 VKEIEEQLISYEIDMAVHSMKDMPTKMDERLVFPVIPKREDSRDALILKNNLKLEDLSML 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+IGT S RR RG I+TR+NKL+ I+LA +G+KR+ +E
Sbjct: 120 ETMIIGTGSKRRSYQFKASYPKAEFEPIRGNIDTRINKLHTQNLDGIILAASGLKRISRE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + + P+P QG + ++T N+ + ++ + + ERA+L E++G
Sbjct: 180 NEISHYFDEKTMIPAPCQGILALQTRTNDYQVIAVLSKVEDRCSRIQYIAERAYLEEIEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + + + G + Y + G + G +A +GR A+ ++
Sbjct: 240 GCHAPVGAYCEINGDKITIYAVYGDEQGNKLIRDNITGATDNADELGRTLAKKMK 294
>gi|70999177|ref|XP_754310.1| porphobilinogen deaminase Hem3 [Aspergillus fumigatus Af293]
gi|66851947|gb|EAL92272.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus
Af293]
gi|159127327|gb|EDP52442.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus
A1163]
Length = 362
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 13/312 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ R L + P I L T GDR L + G K L+
Sbjct: 42 PLRIGTRRSNLAMVQTEGIRDRLQKIG--PDRTYEIEALRTAGDRDQLTALYDFGAKSLW 99
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL SGE+D VH KDMPT L +++A PR+D RD I SLK L
Sbjct: 100 TTELEEKLTSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIIKAGLPYTSLKSL 159
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ AG++R+
Sbjct: 160 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPHSEYMCMVMSAAGLERV 219
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + L D + GQGA+ +E + K QEL+ + + + ER+ +
Sbjct: 220 GLKHRISQYLGSRDGGILYAVGQGALGLEIRKGDRKMQELLGQLADRKSTLACLAERSLM 279
Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293
L+G C I L IV++ DG E +A +G + A
Sbjct: 280 RTLEGGCSVPIGVETEWMSSGDLRMDAIVVSLDGTRSVEDRITARVEAIDEADALGEELA 339
Query: 294 QYIRFISNKNVF 305
+ +
Sbjct: 340 GRLLEAGAGEIL 351
>gi|326804046|ref|YP_004321864.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650262|gb|AEA00445.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a]
Length = 332
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 26/326 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+RIGTR S LA+ + E +L V+ P ++ LSTKGD+ + L++IGGKG+F
Sbjct: 3 TYRIGTRSSRLAMQQSLEVVRALEAVY--PQDEFQLVKLSTKGDKDKSSPLSKIGGKGVF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
IE+ L G++D VHS KD+P++L +G ++A R+D DV ++ DL
Sbjct: 61 VRWIEQALAQGKVDFIVHSLKDVPSELAQGTVLAAIPKRQDPGDVILTAKGMDWHDLPNG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ +GT SLRR A L R D+ ++ RG I++RL+KL A++LA AG+KRL+
Sbjct: 121 ARVGTGSLRRLAQLHALRPDLEIVHVRGNIDSRLDKLARGDFQALVLATAGLKRLQLLDY 180
Query: 184 -----------------------VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
+ ++++ P+ GQGA+ ++ ++ + +E+++
Sbjct: 181 PFDSQRFNQKEVNSEAHILNNYELQAHAFSLDEMIPAVGQGALAVQCLNDDQQTREVLQA 240
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280
++ +T +V CER L L C + + KG + ++ DG
Sbjct: 241 VDDPETHQAVACERVVLKALGADCNYPVGAYGQIKGQEINLTAMIGRQDGFALVRSQLEA 300
Query: 281 NRCDAINIGRDAAQYIRFISNKNVFN 306
A+ +G+ Q +
Sbjct: 301 PLDQALALGQAVYQDLLDQGAGKWLG 326
>gi|167042167|gb|ABZ06900.1| putative porphobilinogen deaminase, dipyromethane cofactor-binding
domain protein [uncultured marine crenarchaeote
HF4000_ANIW93H17]
Length = 311
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 158/300 (52%), Gaps = 4/300 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F +GTR S L+LA S L K P I ++TKGD T R L I KG+F
Sbjct: 2 TFLVGTRGSNLSLAQTNWVISELQK--KNPSSEFEIKTITTKGDTDT-RALFTIDQKGIF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L
Sbjct: 59 EKEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGSNLKTIQLS 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL V
Sbjct: 119 AVVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGL-DV 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C
Sbjct: 178 KHSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIEAERALSDYVESGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A L + DGKI ++ + G+ + N+G++ + ++ +
Sbjct: 238 RFPVGALAIANSGMLKLTVSAYSVDGKISIKLEKTGDVDNPKNLGQELGKELKKSGIAEI 297
>gi|298207313|ref|YP_003715492.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559]
gi|83849949|gb|EAP87817.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559]
Length = 305
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 10/304 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A ++ L ++ + V++P+ + GD I ++ L E+G
Sbjct: 1 MS-KVIRIGTRDSELALWQANTVKAQLENL----GYKTVLVPVKSTGDLILDQPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G++D AVHS KD+PT L KG+ A L R +D+ + + L
Sbjct: 56 TGIFTKTLDVAMVNGDVDIAVHSMKDVPTALPKGIMQGAVLKRAATKDILV---HKGLDF 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L I T SLRRKA L + V+D RG + TRL KL +N + + A AG+ R+
Sbjct: 113 LEAEGTIATGSLRRKAQWLNKYPNHKVVDLRGNVNTRLQKLEDNSWNGAIFAKAGLTRIN 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + + ++ P+P QGA+ I + +E V +N + ER FL L
Sbjct: 173 V--LPEHFIELDWMLPAPAQGAMVIAVMEQDVFCKEAVSKLNDHFSEICTTIEREFLKTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A + ++F G + + DGK E+ + + + N+GR+ A I
Sbjct: 231 EGGCTAPIGALAVIEDKDIWFRGCLFSLDGKQKLEIEKRVSLKENRNLGRNCAIEILDQG 290
Query: 301 NKNV 304
K++
Sbjct: 291 GKDL 294
>gi|195440018|ref|XP_002067856.1| GK12668 [Drosophila willistoni]
gi|194163941|gb|EDW78842.1| GK12668 [Drosophila willistoni]
Length = 629
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 147/297 (49%), Gaps = 16/297 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 4 QDKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNISLPKIGEK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + S+
Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHSI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 122 ATLPKGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQAGL 181
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ ++++ + +T + ER+F
Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDGPVLDMLQKLLCLNTTCRILAERSF 241
Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
L L G C + +A ++ KG L G V + DG I +
Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPMTANSQDVGLSLTGAVWSLDGAIEIREHLACALSE 298
>gi|311745811|ref|ZP_07719596.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1]
gi|126576013|gb|EAZ80291.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1]
Length = 312
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 166/307 (54%), Gaps = 7/307 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +IGTR S LAL A+ L+ I+ + TKGD+I + ++ +IG KG
Sbjct: 2 SKLIKIGTRGSKLALWQAYYVEELLVKA----GLKAEIVIIDTKGDQILDVSIAKIGSKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDL 121
+FT+E+E +L+ G ID AVHSAKDM + L +G +I A+ RE DV SH L
Sbjct: 58 VFTQELEDQLLDGRIDIAVHSAKDMQSNLPEGFEIIAFTERETENDVLASHKKDIDLSGA 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSS RR A L + + ++ RG ++TR+ K+ A+LLAYAG+ R+
Sbjct: 118 SKPLTLGTSSTRRVATLKHFYPHVKTVEVRGNLQTRIRKMEEGLCDALLLAYAGVHRMGY 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQ-ELVKVINHEDTWDSVNCERAFLAE 239
+++I + L++ +F P+ GQG++ IE +P+ + +++ NH +T + ERA+L
Sbjct: 178 DEMIAQKLDLNEFTPAVGQGSVAIEVAEKLDPEVKKQIIDACNHTETSLKLRAERAYLRV 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C + A +G + G +++ DG + +G+ D IG+ A+ +
Sbjct: 238 LEGGCSIPVFALATMEGEEIKLKGGIVSLDGSERISLLVSGSASDPEKIGKQLAKEVFAA 297
Query: 300 SNKNVFN 306
K + +
Sbjct: 298 GGKVILD 304
>gi|15604330|ref|NP_220846.1| porphobilinogen deaminase [Rickettsia prowazekii str. Madrid E]
gi|11386862|sp|Q9ZD77|HEM3_RICPR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3861022|emb|CAA14922.1| PORPHOBILINOGEN DEAMINASE (hemC) [Rickettsia prowazekii]
gi|292572083|gb|ADE29998.1| Porphobilinogen deaminase [Rickettsia prowazekii Rp22]
Length = 299
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 104/296 (35%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRNSTLALIQTNLVIEQIKQI--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P K+ L I+A L RED RDV + QS++ L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDIPGKIPVELVIAAVLEREDPRDVLVCLNYQSIETLPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+++ FRG +++R+ KL + AI+L+YAG+KRL +
Sbjct: 123 VIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDAIILSYAGLKRLNVFNQK 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ + INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSKMLPCIGQGVIAVEIRKDDNAMFNICSQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ IA +A Y + ++ D + N + G AA+ +
Sbjct: 243 STPIAAYAQYLDAYNIQIDFMLGNLDCTKIIFQTEITNIKTSKICGIKAAKMMLAQ 298
>gi|194748513|ref|XP_001956689.1| GF24457 [Drosophila ananassae]
gi|190623971|gb|EDV39495.1| GF24457 [Drosophila ananassae]
Length = 648
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 100/288 (34%), Positives = 146/288 (50%), Gaps = 16/288 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++
Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 122 ASLPNGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQAGL 181
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F
Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDEPVLAMLQKLMCLNTTCRILAERSF 241
Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHE 275
L L G C + +A ++ KG L G V + DG I
Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNGNTQEVGLSLTGAVWSLDGAIEIR 289
>gi|302410259|ref|XP_003002963.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102]
gi|261357987|gb|EEY20415.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102]
Length = 353
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 146/316 (46%), Gaps = 16/316 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ +L + P + I + T GD+ L GGKGL+
Sbjct: 20 TVRIGTRRSALAVRQTELVIEALKRIR--PDYTYEIHAMQTLGDKDQVTALYNFGGKGLW 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-----AQSLK 119
T E+E KL + EID VHS KDMPT L +G + A + RE+ DV + +S+
Sbjct: 78 TNELEAKLTNNEIDVIVHSLKDMPTVLPEGCILGAVVERENPHDVVVFKDTVADQYKSIA 137
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177
DL SV+GTSS+RR A L R + D RG I+TRL KL + AI+LA AG+
Sbjct: 138 DLPAGSVVGTSSIRRIAQLKRKYPGLQFADVRGNIQTRLAKLDNPDGPFTAIILAAAGLL 197
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ I + L + + GQGA+ IE ++ + L++ I H T + ER+
Sbjct: 198 RMDLGGRIGQYLASDTGGILHAVGQGALGIEARTDDDRVLTLLRGIEHGPTRLAAEAERS 257
Query: 236 FLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGR 290
+ L+G C I G TL V DG + + A +GR
Sbjct: 258 VMRTLEGGCSVPIGVETTWRDDGKTLTLKASVTHVDGTHGVDGESTRVIESPEAADQLGR 317
Query: 291 DAAQYIRFISNKNVFN 306
D A + + + +
Sbjct: 318 DLAAELVGRGAQTILD 333
>gi|67459209|ref|YP_246833.1| porphobilinogen deaminase [Rickettsia felis URRWXCal2]
gi|75536359|sp|Q4ULA5|HEM3_RICFE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|67004742|gb|AAY61668.1| Porphobilinogen deaminase [Rickettsia felis URRWXCal2]
Length = 301
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 107/299 (35%), Positives = 163/299 (54%), Gaps = 4/299 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIQTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAILEREDPRDVFVCLNYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-KKEKV 184
VIG+S++RRKA + + RSD+ V FRG I++R+ KL + A +LAYAG+KRL
Sbjct: 123 VIGSSAVRRKAFIQKIRSDLKVTVFRGNIDSRIKKLMTAEVDATILAYAGLKRLRAFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
++ IA ++ Y + ++ D + + + G AA+ + +K
Sbjct: 243 RTPIAAYSKYLDADNIQTDFMLGNLDCSKIIFHTEVTDINTSKEAGIKAAKMMLNQLDK 301
>gi|6319996|ref|NP_010076.1| Hem3p [Saccharomyces cerevisiae S288c]
gi|122846|sp|P28789|HEM3_YEAST RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3771|emb|CAA77804.1| porphobilinogen deaminase [Saccharomyces cerevisiae]
gi|1429351|emb|CAA67486.1| hydroxymethylbilane synthase [Saccharomyces cerevisiae]
gi|1431340|emb|CAA98783.1| HEM3 [Saccharomyces cerevisiae]
gi|190405197|gb|EDV08464.1| phorphobilinogen deaminase [Saccharomyces cerevisiae RM11-1a]
gi|256270069|gb|EEU05314.1| Hem3p [Saccharomyces cerevisiae JAY291]
gi|259145042|emb|CAY78306.1| Hem3p [Saccharomyces cerevisiae EC1118]
gi|285810835|tpg|DAA11659.1| TPA: Hem3p [Saccharomyces cerevisiae S288c]
gi|323309897|gb|EGA63098.1| Hem3p [Saccharomyces cerevisiae FostersO]
gi|323349387|gb|EGA83611.1| Hem3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 327
Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + K P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ K I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDA 285
ERA + L+G C I + T L IV+ +G E + D+
Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
+ G+ A+ + K + +
Sbjct: 299 MACGKILAERMIADGAKKILD 319
>gi|182677009|ref|YP_001831155.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632892|gb|ACB93666.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 337
Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats.
Identities = 132/306 (43%), Positives = 171/306 (55%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLALA A E L H + I + T GD I +R L+ GGKGLFT
Sbjct: 19 LRLGTRGSPLALAQAHELADRLARAHGFAKEAVAITIIRTSGDMIQDRPLSLAGGKGLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ LI G +D AVHSAKD+PT L + L I+ YLPRED+RDV+IS A +DL S
Sbjct: 79 KELDQALIEGMVDLAVHSAKDLPTILPEDLIIAGYLPREDVRDVWISPKAGHPRDLPPGS 138
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT+SLRR ALL R R D+ V RG +ETRL KL + A LLA AG++RL
Sbjct: 139 VVGTASLRRGALLKRLRPDLEVRLLRGNVETRLAKLAAGEVDATLLALAGLRRLGLADKA 198
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L IEDF P+ GQGAI I T ++ L+ I T ++ ER FL LDGSCK
Sbjct: 199 TQVLAIEDFLPAAGQGAIGITTRRDDAATLALLAPILDPATHVALAAERGFLTVLDGSCK 258
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AINIGRDAAQYIRFIS 300
+ I A + + GIVL DG + E +G A +G AA+ I
Sbjct: 259 TPIGAHATVEHDQVTLRGIVLRPDGSEWFEACESGPLESGSLEAARELGETAARAILARL 318
Query: 301 NKNVFN 306
+ F
Sbjct: 319 PEGFFQ 324
>gi|115387533|ref|XP_001211272.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
gi|114195356|gb|EAU37056.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
Length = 342
Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats.
Identities = 106/319 (33%), Positives = 156/319 (48%), Gaps = 17/319 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL +++L P ++ I T GD+ T L + K
Sbjct: 17 KTTFTIGTRKSKLALLQTDLVQAALQKA--WPQYSFRIHSRETAGDQNTTIALRDFTTKN 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
L+T+E+E LI+G++D VHS KD+PT L + L RED RDV + +SL
Sbjct: 75 LWTQELEDLLIAGDVDLIVHSLKDVPTLLPPSCTLGPMLKREDTRDVLVVKKGLSYKSLD 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
DL SV+GTSS+RR A L R + +ID RG I TRL KL+ + I+LA AG+
Sbjct: 135 DLPAGSVVGTSSIRRTAQLARRYPHLKIIDVRGNIGTRLAKLDAEDGPFTCIILAAAGLL 194
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL + I + L+ ++ + GQGA+ IE ++P E++K I ++T + ER+
Sbjct: 195 RLGLQDRITQYLDSKNGGMLYAVGQGALGIEIRKDDPLMHEMLKNIGDDETTFASLAERS 254
Query: 236 FLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAIN 287
L L+G C + + + S L IV++ DGK EV +G+ A
Sbjct: 255 LLRTLEGGCSAPLGVESEWIPSSGSSRKLRMRSIVVSVDGKESAEVEVDGDVDSVDSAEA 314
Query: 288 IGRDAAQYIRFISNKNVFN 306
G A + +
Sbjct: 315 FGIKVANALVEKGAGKILE 333
>gi|215434281|gb|ACJ66828.1| porphobilinogen deaminase [uncultured bacterium pSY1435]
Length = 310
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LAL A R L+ + ++ ++T+GDRI +R L E+GGKGLF
Sbjct: 7 LRLGTRASALALWQARHVRDRLLARWGA-AIEVELVEITTEGDRIIDRPLNEVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
IE +L+ ID AVHS KD+P GL I R D RDV + +L L +
Sbjct: 66 TGIEDRLLDRSIDFAVHSMKDLPGHTPDGLAIVCTPERADARDVLVGRAGSTLVRLPAGT 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR AL R I VI RG + TR+ K+ + +LLA AG++RL+ + +
Sbjct: 126 RVGTSSLRRAALARRINPGIEVIAIRGNVPTRIAKIADGVCDVVLLAAAGLERLELAQHV 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ E F P+ QG + IE ++ + EL+ + H DT ER FLA L+G C+
Sbjct: 186 AEYLDPESFCPAACQGILAIEARADDRRVHELLAPLEHADTATLAAAERGFLARLEGGCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A A L+ G+V+ G+ + G A +GR A+ + + +
Sbjct: 246 VPMACHARLDAGVLHVRGLVVGIGGEPLFDAREQGEPSAAAQLGRTVAEQLLVLGAAEIL 305
>gi|121605981|ref|YP_983310.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2]
gi|120594950|gb|ABM38389.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2]
Length = 331
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 19/313 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LA+ A ++ L + ++ ++T GD+I +R+L+++GGKGLF
Sbjct: 13 KVVIATRESRLAMWQAEHVKALLESRLGW---QVELLGMTTLGDQILDRSLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++ L RED D F+S+ SL +L
Sbjct: 70 VKELEVALSEGRADLAVHSLKDVPMDLPEGFALACVLEREDPHDAFVSNDFASLAELPPG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR LL R D+++ RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 130 AVVGTSSLRRLVLLKALRPDLAIQPLRGNLDTRLRKLDEGQYQAIVLAAAGLKRLGLESR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ D P+ GQGA+ IE + + + H+ TW +V ER + GSC
Sbjct: 190 IRHTFAPTDMLPAAGQGALGIEVRADRADLIAALATLAHQPTWLAVTAERTVSRAMGGSC 249
Query: 245 KSAIAGFAYC-KGSTLYFYGIVLAS---DGK------------IFHEVSRNGNRCDAINI 288
+A F L D + + + +A +
Sbjct: 250 SMPLAAFVTAGSDGALQLDAAWGDPATADASSGVSAVLPAPLVQVRQTAVVRSFAEAEAL 309
Query: 289 GRDAAQYIRFISN 301
G A +R
Sbjct: 310 GDAVAAQLRAGGA 322
>gi|257470630|ref|ZP_05634720.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
Length = 306
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 152/301 (50%), Gaps = 16/301 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTLTEI 58
IG+R S LA+A + + L + P I + T GD +++L
Sbjct: 12 IVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSL--- 66
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L
Sbjct: 67 --KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR
Sbjct: 125 MELPAGAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKR 184
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ EK I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F
Sbjct: 185 VGLEKEITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSK 244
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + G + GI G+ + S + I + A I+
Sbjct: 245 IFDGGCHTPMGCHCILDGDKITLTGIYFK--GENGYSASITEDAALGIKTAQKLADIIKE 302
Query: 299 I 299
Sbjct: 303 K 303
>gi|225630165|ref|YP_002726956.1| porphobilinogen deaminase [Wolbachia sp. wRi]
gi|254800263|sp|C0R2M3|HEM3_WOLWR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|225592146|gb|ACN95165.1| porphobilinogen deaminase [Wolbachia sp. wRi]
Length = 292
Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats.
Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 3 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L +
Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 121 TIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + LY ++ DGK + R DA +G DA ++
Sbjct: 238 TPLAALAEYVSENMLYLRCMLA--DGKNIYFTERTSFIEDAEKMGMDAGLELKSK 290
>gi|170691941|ref|ZP_02883105.1| porphobilinogen deaminase [Burkholderia graminis C4D1M]
gi|170143225|gb|EDT11389.1| porphobilinogen deaminase [Burkholderia graminis C4D1M]
Length = 318
Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats.
Identities = 104/292 (35%), Positives = 159/292 (54%), Gaps = 5/292 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G
Sbjct: 1 MWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P +L G +S + RED RD +S+ SL L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L + V RG ++TRL KL+ AI+LA AG+KRL E I+ +L+ ED P
Sbjct: 119 MLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEGRIRALLDPEDSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + + ++HE T +V ER L GSC+ +A +A
Sbjct: 179 AAGQGALGIEIRSDRAELAAWLAPLHHEHTAAAVEAERMVSRVLGGSCEVPLAAYATWHD 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305
L+ GIV DG+ + AI +GR+ A + ++
Sbjct: 239 GALHLRGIVATPDGQRVLSAQASAPAPTTERAIALGREVANALEQQGAMDIV 290
>gi|257465835|ref|ZP_05630146.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
gi|315916992|ref|ZP_07913232.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
gi|313690867|gb|EFS27702.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
Length = 299
Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 164/301 (54%), Gaps = 6/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K+ +G+R S LALA + L H P + I + T+GD+ + ++
Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L
Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR
Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++E+ + ER F
Sbjct: 179 VKLEEKITEYLDPTIFPPAPAQGALYIQCREKDTEVQKILQSIHNENLEKVLVVEREFSK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + ++ +G TL F+ + + + ++ N +I R AAQ I
Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHENKR--YQTKVVENLSKGKDIARMAAQEIEK 296
Query: 299 I 299
+
Sbjct: 297 M 297
>gi|317010518|gb|ADU84265.1| porphobilinogen deaminase [Helicobacter pylori SouthAfrica7]
Length = 306
Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 93/303 (30%), Positives = 151/303 (49%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + T GD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANYIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITQRADVRDTFLSAQFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL +
Sbjct: 120 AKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLECGEFDAIVLAEAGLRRLNIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E ++ ++ +N E + + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKSHKHFST-LQKLNDEKSAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + A G + I+ +G+ + G++ A ++ ++ + +
Sbjct: 239 CQIPVGVHASLMGEKVKIQAILGLPNGEEVITKEKQGDKNKAFDLVQELLEAFLQNGARE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|254566627|ref|XP_002490424.1| Phorphobilinogen deaminase [Pichia pastoris GS115]
gi|238030220|emb|CAY68143.1| Phorphobilinogen deaminase [Pichia pastoris GS115]
Length = 344
Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 17/316 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LA+ A R + + + P ++ +ST GD++ N+ L GGK L+T
Sbjct: 15 LKLGSRKSALAIIQAEIVRQLI--LKEYPELETKLVSVSTLGDQVQNKALFTFGGKSLWT 72
Query: 66 EEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
+E+E L+ +ID VHS KDMPT L ++ + RED RD + +S
Sbjct: 73 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 132
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAG 175
L DL +V+GTSS+RR A LL+ + RG ++TRL KL +++ +LLA AG
Sbjct: 133 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 192
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R + I LN + S GQGA+ +E + + + + I H T ERA
Sbjct: 193 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 252
Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN---GNRCDAINIGR 290
L L+G C I T L +V++ +G+ S A + G
Sbjct: 253 LLRYLEGGCSVPIGVSTIYSEDTKELTMNSLVVSCNGRDSVTESMTEVVTTEEQAEDFGE 312
Query: 291 DAAQYIRFISNKNVFN 306
AQ + K + +
Sbjct: 313 RLAQKLIDQGAKRILD 328
>gi|195127549|ref|XP_002008231.1| GI11928 [Drosophila mojavensis]
gi|193919840|gb|EDW18707.1| GI11928 [Drosophila mojavensis]
Length = 632
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 99/311 (31%), Positives = 149/311 (47%), Gaps = 28/311 (9%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 6 KEKVIRVGSRKSELALIQTKHVVGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + ++
Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLREHLKGHTI 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 124 ASLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKDSKFSGIILAQAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F
Sbjct: 184 VRMGWMNRISQVLEPTDLLYAVGQGALAVECRANDAHVLGMLQRLMCLNTTCRILAERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGS---------------------TLYFYGIVLASDGKIFHE 275
L L G C + +A ++ KG L G V + DG I
Sbjct: 244 LKTLGGGCSAPVAVWSKLKGEPSNISNGNRQQQQQLKQDEEVGLSLTGAVWSLDGAIEIR 303
Query: 276 VSRNGNRCDAI 286
+ ++
Sbjct: 304 EHLDCALNESE 314
>gi|302884312|ref|XP_003041052.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI
77-13-4]
gi|256721948|gb|EEU35339.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI
77-13-4]
Length = 332
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 153/317 (48%), Gaps = 15/317 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RIGTR S LA+ A R SL + P I L T GD+ + L G K
Sbjct: 7 TQPPLRIGTRRSNLAMVQAEGIRDSLQKI--APDRTFEIEALKTLGDKDKSTALYSFGAK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+T E+E+KL SG+ID VH KDMPTKL +++A R+D RD I +L
Sbjct: 65 NLWTTELEEKLTSGDIDVVVHCLKDMPTKLPDTCELTAIPLRDDPRDALIVKASLPYNNL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
K L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ G+
Sbjct: 125 KTLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIMSACGL 184
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+R+ I + L +D + GQGA+ +E + K EL+ + + + + ER
Sbjct: 185 QRVGLGHRITQFLGSKDGGIYHAVGQGALGLEIRKGDTKTLELINQLVDQKSTLACLAER 244
Query: 235 AFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG---NRCDAINI 288
A L L+G C I + L IV++ DG + + + N +A +
Sbjct: 245 ALLRTLEGGCTVPIGVETEWVDESQLLLRMRAIVVSLDGTQSVQDTMDATVKNDDEATAL 304
Query: 289 GRDAAQYIRFISNKNVF 305
GR+ A + +
Sbjct: 305 GRELAARLAKGGASEIL 321
>gi|157125875|ref|XP_001654431.1| porphobilinogen deaminase [Aedes aegypti]
gi|108873496|gb|EAT37721.1| porphobilinogen deaminase [Aedes aegypti]
Length = 534
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 100/286 (34%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ R+G+R S LAL + L ++ P I ++T GDR+ N++L +IG K
Sbjct: 6 KEHVIRVGSRKSELALIQTKHVIACLQKLN--PDVQYEIHTMTTVGDRVLNKSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + + ++L
Sbjct: 64 SLFTKDLEDALRNGGVDFVVHSLKDLPTSLPIGMAIGAVLEREDPRDALVLNEKFRGKTL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
L SVIGTSSLRR A L R + V D RG + TRL KL+ K I+LA AG+
Sbjct: 124 STLPKGSVIGTSSLRRSAQLARLHPHLVVCDIRGNLNTRLAKLDAEGSKFAGIVLAQAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+F
Sbjct: 184 VRMGWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSF 243
Query: 237 LAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEV 276
L L G C + +A K + L G V + DGK
Sbjct: 244 LKTLGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGKTEIRA 289
>gi|237751827|ref|ZP_04582307.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879]
gi|229373193|gb|EEO23584.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879]
Length = 328
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 153/315 (48%), Gaps = 14/315 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++KP +GTR S LAL A + L + +V+ + TKGD+I + L +IGGK
Sbjct: 11 QEKPLVLGTRGSLLALWQANHIKEKLESL----GFQVVLKTIKTKGDKILDAPLAKIGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E +L+SG ID AVHS KD+P + L + + RED RD F+S + L
Sbjct: 67 GLFTKELENELLSGGIDFAVHSLKDVPIAIPPELMLVSITQREDARDCFVSEKYADIASL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT+SLRR L R R D+ RG ++TRL KL + AI+LA AG+ RL
Sbjct: 127 PQGAKVGTTSLRRSMQLKRIRQDLDTQSLRGNVQTRLEKLRKGEFDAIILASAGLNRLDL 186
Query: 182 EKVIK--EILNIEDFPPSPGQGAICIETH-------VNNPKAQELVKVINHEDTWDSVNC 232
+ I L I F P+ GQG++ IE + ++++ ++ + N
Sbjct: 187 KDDIGFISHLQINQFIPAMGQGSLGIECRDPKYSPDFRDQAIMKVLESLHDSKSALCCNI 246
Query: 233 ERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
ERAF+ L G C+S I A + +V D +R N+ + +D
Sbjct: 247 ERAFIQLLGGGCQSPIGIHAQILDSKEIEIQCVVGNLDASKVLTETRVCNKGEVEYALQD 306
Query: 292 AAQYIRFISNKNVFN 306
++ +
Sbjct: 307 MINTLKKNGVMEILE 321
>gi|151941802|gb|EDN60158.1| phorphobilinogen deaminase [Saccharomyces cerevisiae YJM789]
Length = 327
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + K P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ K I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDA 285
ERA + L+G C I + T L IV+ +G E + D+
Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDKIEMLIENVKEDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
+ G+ A+ + K + +
Sbjct: 299 MACGKILAERMIADGAKKILD 319
>gi|322379565|ref|ZP_08053902.1| porphobilinogen deaminase [Helicobacter suis HS1]
gi|322380567|ref|ZP_08054732.1| porphobilinogen deaminase [Helicobacter suis HS5]
gi|321147006|gb|EFX41741.1| porphobilinogen deaminase [Helicobacter suis HS5]
gi|321147959|gb|EFX42522.1| porphobilinogen deaminase [Helicobacter suis HS1]
Length = 302
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP IG+R S LAL A ++ L + + VI + TKGD+I + L +IGGKGL
Sbjct: 2 KPLIIGSRGSALALWQARYIQTQLESLGLLS----VIEVVKTKGDKILDVPLAKIGGKGL 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ L+S +ID AVHS KD+P + ++ L ++ R D RD F+S + + KDL
Sbjct: 58 FTKELEELLLSKDIDLAVHSLKDVPVEFVEPLDLACVSVRADARDCFLSFKSPNFKDLPK 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR L R R D+ + RG ++TRL +L + AI+LA AG++RL+ +
Sbjct: 118 GAKVGTTSLRRSMQLKRKRPDLDTLSLRGNVQTRLKRLEAGEFDAIVLACAGVERLQIKV 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ IE+ P GQGA+ +E ++P + +N + ER F+ +L G
Sbjct: 178 PYQIPFEIEEMIPCMGQGALGVEMCTSHP-LFNTIAGLNDSTSAFLCGVERLFVKKLGGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A KG L +V DG + G A + + K
Sbjct: 237 CQVPIGVHASLKGDHLEICAVVGLVDGSQMIKEKIQGLAKQANTLVQTLLDRFLAQGAKE 296
Query: 304 VF 305
+
Sbjct: 297 IL 298
>gi|195376491|ref|XP_002047030.1| GJ12153 [Drosophila virilis]
gi|194154188|gb|EDW69372.1| GJ12153 [Drosophila virilis]
Length = 618
Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats.
Identities = 100/325 (30%), Positives = 151/325 (46%), Gaps = 31/325 (9%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 6 KEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + ++
Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTI 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
L SVIGTSSLRR A + R + V D RG + TRL KL+ + I+LA AG+
Sbjct: 124 ATLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKESKFAGIILAQAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F
Sbjct: 184 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDAHVLTMLQKLMCLNTTCRILAERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGS------------------TLYFYGIVLASDGKIFHEVSR 278
L L G C + +A ++ KG L G V + DG I
Sbjct: 244 LKTLGGGCSAPVAVWSNLKGEPSSINANNRQQQQQLEEVGLSLTGAVWSLDGAIEIREHL 303
Query: 279 NGNRCDAINIGRDAAQYIRFISNKN 303
+ ++ + +R N
Sbjct: 304 DCALNESET------EVLRRKRAAN 322
>gi|300856363|ref|YP_003781347.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528]
gi|300436478|gb|ADK16245.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528]
Length = 290
Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 150/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+I TR S LA L + + + T GD+ + L +IGGKGLF
Sbjct: 3 FKIATRKSKLAQTQTEIVMDILQKDYNA---KCEKVLIETMGDKRLDIALNKIGGKGLFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ E D AVHS KD+P + + +I+A + RED+RD F+S +L +
Sbjct: 60 KEIELALLKDEADAAVHSMKDVPFDVPEDFEIAAIMQREDVRDAFVSKDKVPFDELPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR L R DI + RG I+TR++K+ + I+LA AGIKR E+++
Sbjct: 120 KIGTSSNRRAEQLKILRPDIEIAPIRGNIQTRISKIESQNLDGIVLAAAGIKRSHLEELV 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E +ED P+ GQGA+ IET + K + ++ E+T V ER+F+ L+G C
Sbjct: 180 TEYFKVEDMVPAIGQGALGIET-KKDSKNKSFFSKLDDENTRICVEAERSFMRTLNGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A T+ G+ + G + GN+ D + +G A+ I
Sbjct: 239 STIGAYAKIDKDTINIMGMFMV--GNKLIKKDVTGNKEDYMVLGEKLAKMILKA 290
>gi|71083016|ref|YP_265735.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062129|gb|AAZ21132.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 307
Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 172/302 (56%), Gaps = 1/302 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M+ + IG+R S LAL +A + R L ++I + TKGD++ ++ L+E+G
Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK
Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L
Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L
Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C++A+ FA +G+ + + + DG + + + A +G + + ++ +
Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVNKAEELGIEMGKTLKKM 300
Query: 300 SN 301
SN
Sbjct: 301 SN 302
>gi|83720099|ref|YP_441428.1| porphobilinogen deaminase [Burkholderia thailandensis E264]
gi|257139896|ref|ZP_05588158.1| porphobilinogen deaminase [Burkholderia thailandensis E264]
gi|123740194|sp|Q2T071|HEM3_BURTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83653924|gb|ABC37987.1| porphobilinogen deaminase, putative [Burkholderia thailandensis
E264]
Length = 329
Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC
Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG SR DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGARVLAARAQSRAATAADALALGRAVSDELERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|325688053|gb|EGD30072.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK72]
Length = 306
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 107/302 (35%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCVLGAISQREDVRDCLIFRQAGQTLANLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 QGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWM 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + ++L+ + E T V+ ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVSVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA A ++ DG+ VS G D + A + +
Sbjct: 240 MNADCSFPIAALARKNDQDYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|225706856|gb|ACO09274.1| Porphobilinogen deaminase [Osmerus mordax]
Length = 357
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 110/334 (32%), Positives = 157/334 (47%), Gaps = 33/334 (9%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K
Sbjct: 16 SRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 73
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L
Sbjct: 74 LFTKELENALERNEVDLVVHSLKDLPTTLPTGFTIGAVLQRENPHDAVVLHPKNAGLTLD 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKR 178
L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 134 ALPSESVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKR 193
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + +IL +D + GQGA+ IE + E+V ++H +T ERAFL
Sbjct: 194 MGWEGRVSQILGPDDCMYAVGQGALAIEVRARDRDILEMVSTLHHPETVLRCIAERAFLK 253
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSR-NGNRCD--------- 284
L+G C +A K L G V + DG K + S GN+ +
Sbjct: 254 HLEGGCSVPVAVHTELKDLMLSMTGAVFSLDGADSLKEVMQTSVDTGNQVEEPADTQHVG 313
Query: 285 -------------AINIGRDAAQYIRFISNKNVF 305
A +G D A + ++
Sbjct: 314 VTARNMPQSSQDAAEKLGVDLATLLLSKGAMDIL 347
>gi|119490987|ref|XP_001263154.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL
181]
gi|119411314|gb|EAW21257.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL
181]
Length = 331
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/315 (32%), Positives = 154/315 (48%), Gaps = 13/315 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+A A R SL + +P + I L T GDR L G K
Sbjct: 9 QPPLRIGTRRSNLAMAQAEGIRDSLQKI--VPDRSYEIEALRTLGDRDQLTALYSFGAKS 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
L+T E+E+KL SGE+D VH KDMPTKL +++A PR+D RD I SLK
Sbjct: 67 LWTTELEEKLTSGELDVIVHCLKDMPTKLPDTCELAAIPPRDDPRDALIVKAGLPYTSLK 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177
L +V+GTSS+RR A L R + + RG +ETRL K+ +++ ++++ AG++
Sbjct: 127 SLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDSEYTCMVMSAAGLE 186
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ + I + L D + GQGA+ +E + K QEL+ + + + + ER+
Sbjct: 187 RVGLKHRISQYLGSRDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQKSTLACLAERS 246
Query: 236 FLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRD 291
+ L+G C I L IV++ DG E S +A +G +
Sbjct: 247 LMRTLEGGCSVPIGVETEWMPSGDLRMNAIVVSLDGTRSVEDSITSRVEVVDEADALGEE 306
Query: 292 AAQYIRFISNKNVFN 306
A + + N
Sbjct: 307 LAGRLVKAGAGKILN 321
>gi|91762559|ref|ZP_01264524.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718361|gb|EAS85011.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 307
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 172/302 (56%), Gaps = 1/302 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M+ + IG+R S LAL +A + R L ++I + TKGD++ ++ L+E+G
Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK
Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L
Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L
Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C++A+ FA +G+ + + + DG + + + A +G + + ++ +
Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVDKAEELGIEMGKTLKKM 300
Query: 300 SN 301
SN
Sbjct: 301 SN 302
>gi|237740509|ref|ZP_04570990.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31]
gi|229422526|gb|EEO37573.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31]
Length = 301
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 148/303 (48%), Gaps = 7/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
K+ IG+R S LALA A ++SL + P I + T GD+ N +
Sbjct: 2 KRHVVIGSRGSILALAQASLVKNSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNASL 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L
Sbjct: 60 KSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLVT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E FPP+P QG + I+ N+ + + ++K I++ED V ER F
Sbjct: 179 MADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNEDIAKIVEIEREFSKIF 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C + + ++ + F + DGK V + I AA+ I+
Sbjct: 239 DGGCHTPMGCYSQVDEDKIKFIAAY-SHDGKQ-IRVVIEDDLTKGKEIAHMAAEEIKAKI 296
Query: 301 NKN 303
NK
Sbjct: 297 NKG 299
>gi|332363838|gb|EGJ41617.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK355]
Length = 306
Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQSGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|170703456|ref|ZP_02894225.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10]
gi|170131633|gb|EDT00192.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10]
Length = 304
Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 162/293 (55%), Gaps = 5/293 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G
Sbjct: 1 MWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPPGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ ++++ED PP
Sbjct: 119 MLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + ++ T +V ER L GSC+ +A A +
Sbjct: 179 AAGQGALGIEIAAHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAAHAVWRA 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306
LY G V +DG+ G DA+ +GR + + ++ N
Sbjct: 239 GELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGALDIVN 291
>gi|225025796|ref|ZP_03714988.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353]
gi|224956880|gb|EEG38089.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353]
Length = 844
Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 104/288 (36%), Positives = 160/288 (55%), Gaps = 6/288 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +IGTR S LAL + + P + I+ + TKGD+I +++LT GGKG
Sbjct: 2 KNIIKIGTRKSKLALIQTDIVKDKIKKA--FPEIEVEIVKIDTKGDQILDKSLTSFGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT E+E +L+SG +D AVHSAKDMP +GL I A L R D+RD F++ T + L++L
Sbjct: 60 VFTAELEAELLSGAVDIAVHSAKDMPMDFPEGLGIGAVLDRADVRDTFVTTTGKKLEELE 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR+ L+ +++ RG ++TRL+KL + + I+LA AGI+RL E
Sbjct: 120 PGSIVGTSSLRRELLIKEINPYVTIKLLRGNVQTRLSKLRDGQYDGIILAAAGIERLGYE 179
Query: 183 K---VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K + + L+ + F P+ GQG + +E+ V + + E++ I+ E + ERAFL
Sbjct: 180 KEEGLHYQYLDPDVFLPAAGQGILAVESRVEDAEMAEILAAIHSEKAECLLMAERAFLKT 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
+ GSC + A + + + DG + N DAI
Sbjct: 240 IGGSCNAPAAALCREENGEFSMRAMYV-KDGIHSRKTYMTVNIEDAIA 286
>gi|162449896|ref|YP_001612263.1| hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56']
gi|189028159|sp|A9FDP9|HEM3_SORC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|161160478|emb|CAN91783.1| Hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56']
Length = 300
Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 158/297 (53%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ TR S LALA + SL +P ++ + + T GD+ +R+L +IGGKGLF
Sbjct: 5 LTLATRRSALALAQSRAFARSLEAA--VPDLSLRELEVVTSGDKTQDRSLQDIGGKGLFI 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ D AVHS KD+P ++ L ++ RED RD ++ + L +L +
Sbjct: 63 KELEEALLDRRADFAVHSIKDVPAEIAPALCLACIPAREDPRDALVTRSGALLAELPAGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR L R D+ + RG ++TRL K+ + A++LA AG+KRL E
Sbjct: 123 RVGTSSLRRAVALREARPDLVIEPVRGNVDTRLRKVFDGVFDAVVLALAGLKRLGLEARA 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ E P+ GQGA+ IE + ++++ + +T V+ ERA +A ++GSC+
Sbjct: 183 TEVLSPEVSLPAIGQGALGIECRTADDSVRDVLGTLADAETTICVSAERAVMAAVEGSCR 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDAAQYIRF 298
+ +A +A G L+ ++ DG R GN +A +G D ++
Sbjct: 243 TPVAAYAVRDGGALWLRALLAEPDGSRLRRAERRLSWPGNTREAERLGADLGAELKK 299
>gi|70997451|ref|XP_753473.1| hydroxymethylbilane synthase [Aspergillus fumigatus Af293]
gi|66851109|gb|EAL91435.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus
Af293]
gi|159126797|gb|EDP51913.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus
A1163]
Length = 341
Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 151/319 (47%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ F IGTR S LAL ++L P + I T GD+ T L E K
Sbjct: 15 SRRTFTIGTRKSKLALLQTDLVVAALKK--SWPEYTFQIHSQETAGDKNTVIALREFTTK 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + S
Sbjct: 73 NLWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMSF 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
++ SV+GTSS+RR A L R + V D RG I TRL KL+ I+LA AG+
Sbjct: 133 SEMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIVLAAAGL 192
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL E I + L+ ++ + GQGA+ +E ++ ++++ I H+ T + ER
Sbjct: 193 LRLGMEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKVLRDMLNSIGHQKTTLACLAER 252
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
+ L L+G C + + L IV++ DG+ EV +G+ A
Sbjct: 253 SLLRTLEGGCSAPLGVETEWVQDSDRSSKLRMRAIVVSVDGRESAEVEVDGSVDTAESAE 312
Query: 287 NIGRDAAQYIRFISNKNVF 305
G A+ + +
Sbjct: 313 EFGVTVAKALVEKGAGEIL 331
>gi|125975012|ref|YP_001038922.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405]
gi|256005102|ref|ZP_05430072.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360]
gi|281418570|ref|ZP_06249589.1| porphobilinogen deaminase [Clostridium thermocellum JW20]
gi|167008812|sp|A3DIF0|HEM3_CLOTH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125715237|gb|ABN53729.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405]
gi|255990953|gb|EEU01065.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360]
gi|281407654|gb|EFB37913.1| porphobilinogen deaminase [Clostridium thermocellum JW20]
gi|316939173|gb|ADU73207.1| porphobilinogen deaminase [Clostridium thermocellum DSM 1313]
Length = 292
Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 158/297 (53%), Gaps = 7/297 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LA+ A S+ + P I ++ + T GD+I ++T+ +IGGKGLF
Sbjct: 2 KIRVGSRESKLAVRQAQIVIDSIKKYN--PDIEIELVTMKTTGDKILDKTIDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+++ L+ G++D VHS KDMP + L I A RED RDV + ++ D +
Sbjct: 60 VKELDRALLDGKVDITVHSFKDMPMDIDDRLPIVAVSKREDPRDVLVLPKGKNEIDF--N 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG SS RRK + + +V RG + TRL KL+ + AI LAYAG+KRL E+
Sbjct: 118 GPIGCSSSRRKIQIEKIYPGCTVEPIRGNVLTRLEKLDKGEYSAIALAYAGLKRLGLEER 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + ++ P+ QG I ++ + ++ + +D+WD ER+F+ L+G C
Sbjct: 178 IWRVFSTDEIVPAACQGIIAVQARKDFD--ASILANFHDKDSWDVSVAERSFIKALNGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
S A + +G + G + +GKI+ ++++ G+R +G A + ++
Sbjct: 236 SSPSAAYGVIQGEKIVLTGFYVDKNGKIY-KMTKTGDRNQGEALGYSLAMEMLKGAD 291
>gi|121711982|ref|XP_001273606.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL
1]
gi|119401758|gb|EAW12180.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL
1]
Length = 333
Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 149/314 (47%), Gaps = 15/314 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R +L + P + I+ L T GDR + L G K L+
Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDNLQKL--SPDRSFEIVTLHTLGDRDKSTALYSFGAKNLW 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL SGE+D VH KDMPT L ++A PR+D RD I +L+ L
Sbjct: 69 TAELEEKLNSGELDVVVHCLKDMPTTLPDTCDLAAIPPRDDPRDALIIKSSLPYTTLQSL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
+++GTSS+RR A L R + + RG +ETRL K+ + + ++++ AG++RL
Sbjct: 129 PAGAIVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDGEYTCMVMSAAGLERL 188
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + L D + GQGA+ +E + EL+ + E + + ERA +
Sbjct: 189 GLQHRISQYLGSRDGGILHAVGQGALGLEIRKGDSATLELLDRLGDEGSTLACLAERALM 248
Query: 238 AELDGSCKSAIAGFAYCKG---STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291
L+G C I L IV++ DG S ++ +AI +G +
Sbjct: 249 RALEGGCSVPIGVETEWVDWAARLLAMRAIVVSLDGTRSVLDSVEVRVQSKEEAIALGEE 308
Query: 292 AAQYIRFISNKNVF 305
A + +
Sbjct: 309 LAARLVKAGADGIL 322
>gi|328786215|ref|XP_624261.3| PREDICTED: porphobilinogen deaminase-like [Apis mellifera]
Length = 357
Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats.
Identities = 107/281 (38%), Positives = 154/281 (54%), Gaps = 7/281 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+G+R S LAL L + H P II +STKGD+I +++L +IG K
Sbjct: 6 TRDVIRVGSRKSELALKQTKYVIECLKEYH--PTKEFQIITMSTKGDKILDKSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
LFTEE+E L SG +D VHS KD+PT L +G+ + A L RED RD + + ++L
Sbjct: 64 SLFTEELELALESGRVDFVVHSLKDLPTSLPEGMALGAILKREDPRDAVVMSKKYKNKTL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
L SVIGTSSLRR A L R + V + RG + TRL KL++ AI+LA AG+
Sbjct: 124 STLPEGSVIGTSSLRRSAQLARNMPHLKVENIRGNLNTRLRKLDDENGPFAAIILAAAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KR+ E I ++L E+ + GQGA+ +E + K L++ + +T CER+F
Sbjct: 184 KRMNWENRISQLLEPEEALYAVGQGALGVECRETDWKILSLLEPLYDVETTLRCVCERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
L L G C + +A + K L G V + DG+ F + +
Sbjct: 244 LKTLGGGCSAPVAVSSTLKNKILTVTGAVWSLDGQKFIKDT 284
>gi|109947886|ref|YP_665114.1| porphobilinogen deaminase [Helicobacter acinonychis str. Sheeba]
gi|123066146|sp|Q17W61|HEM3_HELAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|109715107|emb|CAK00115.1| hemC [Helicobacter acinonychis str. Sheeba]
Length = 306
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 93/303 (30%), Positives = 151/303 (49%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + T GD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANYIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSTKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR L R D+ RG ++TRL KL + + AI+LA AG+ RL +
Sbjct: 120 AKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLESGEFDAIILAEAGLCRLNIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKSHKHFTA-LQKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + A G + I+ +G+ + G++ A + ++ + +
Sbjct: 239 CQIPVGVHASLMGEKVKIQAILGLPNGEEVIAKEKQGDKNKAFDSVQELLEAFLQSGARE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|327469193|gb|EGF14665.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK330]
Length = 306
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 163/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 182 --EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + +L+ + E T V ERA LA+
Sbjct: 180 DQSHLHIQPLETSLCLPAISQGALAVECREEDKELLQLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA KG ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKKGQDYQLEAMLAKEDGQCVF-VSLKG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|257463595|ref|ZP_05627986.1| porphobilinogen deaminase [Fusobacterium sp. D12]
gi|317061149|ref|ZP_07925634.1| porphobilinogen deaminase [Fusobacterium sp. D12]
gi|313686825|gb|EFS23660.1| porphobilinogen deaminase [Fusobacterium sp. D12]
Length = 301
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 6/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K +G+R S LALA + L + P I + T+GD+ +E+
Sbjct: 1 MLKHHIILGSRGSILALAQTNWVKKQLQRHY--PQLTFSIQVIETQGDKDLTSHFGNSEL 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV +S + ++L
Sbjct: 59 SLKSFFTKEIEKSLLDGEIDIAVHSMKDVPSSSPVGLICGAIPVREDVRDVLVSTSGKTL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL S++GTSSLRR + + R D+ + RG I TRL KL AI+LA AG+KR
Sbjct: 119 ADLPKGSILGTSSLRRIQNIKQLRPDLEIKALRGNIHTRLKKLEEGHYDAIVLAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E+ I E LN F P+P QGA+ I+ + + + +++ I+ E+ + ER F
Sbjct: 179 VGLEEKITEYLNPTVFSPAPAQGALYIQCREKDEETRNILQSIHDENLAKILEIEREFSR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + ++ +G ++F+ + + ++ + I AAQ I+
Sbjct: 239 IFDGGCHTPMGCYSKVEGKKIFFHAMYSHKEKS--YQTIITESITKGKEIAIMAAQEIQK 296
Query: 299 I 299
+
Sbjct: 297 M 297
>gi|195014661|ref|XP_001984055.1| GH15218 [Drosophila grimshawi]
gi|193897537|gb|EDV96403.1| GH15218 [Drosophila grimshawi]
Length = 612
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 149/305 (48%), Gaps = 24/305 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 6 KDKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + ++
Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTI 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SVIGTSSLRR A + R D+ V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 124 ANLPKGSVIGTSSLRRTAQIRRQYPDLIVCDIRGNLNTRLAKLDAKDSKFAGIILAQAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F
Sbjct: 184 VRMGWMARISQVLEPTDLLYAVGQGALAVECRANDNQVLGMLQKLMCLNTTCRILAERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGS-----------------TLYFYGIVLASDGKIFHEVSRN 279
L L G C + +A ++ G L G V + DG I +
Sbjct: 244 LKTLGGGCSAPVAVWSNLNGEPSSINREQLLQQQQQEVGLSLTGAVWSLDGAIEIREHLD 303
Query: 280 GNRCD 284
D
Sbjct: 304 CALND 308
>gi|325693629|gb|EGD35548.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK150]
Length = 306
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + ++L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSFQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|254577639|ref|XP_002494806.1| ZYRO0A10098p [Zygosaccharomyces rouxii]
gi|238937695|emb|CAR25873.1| ZYRO0A10098p [Zygosaccharomyces rouxii]
Length = 327
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 150/321 (46%), Gaps = 18/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RIG R S LA+ + + + K P + L T GD+ ++ L GG
Sbjct: 1 MSRR-IRIGGRQSQLAIVQSELVKHLIEQ--KFPDITCSVFALQTLGDQQQSKPLYSFGG 57
Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115
K L+T+E+E L ++D VHS KDMPT L G ++ R D D +
Sbjct: 58 KALWTKELEDLLYDEDDNRKLDIIVHSLKDMPTTLPDGFELGGITERVDPSDCLVMPQGS 117
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
++L L SV+GTSS+RR A L R + RG + TR+ KL++ N I+L
Sbjct: 118 PHKNLDTLPAGSVVGTSSVRRSAQLKRKYPHLRFESIRGNLHTRIRKLDDPQNDYQCIIL 177
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+KRL I + + GQGA+ IE + + ++++ + H++T
Sbjct: 178 ASAGMKRLGLGYRITNTFDSSVMYHAVGQGALGIEIRAQDKEMKKILDAVCHKNTTVCCL 237
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRC----DA 285
ER + L+G C I + +T L+ GIV++ DGK E+++ D+
Sbjct: 238 AERQLMRSLEGGCSVPIGVGSRYDETTGYLHLRGIVVSVDGKQAVELNQELAINDVIRDS 297
Query: 286 INIGRDAAQYIRFISNKNVFN 306
I G+ A+ + + +
Sbjct: 298 IECGKLLAEKMISNGARKILE 318
>gi|313637685|gb|EFS03063.1| porphobilinogen deaminase [Listeria seeligeri FSL S4-171]
Length = 274
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 5/270 (1%)
Query: 39 VIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQIS 98
I + TKGDRI + TL+++GGKGLF E+E+ L G ID AVHS KD+P+ + +GL I
Sbjct: 1 EIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIG 60
Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
A RE D F+ +T +S DL +VIGTSSLRR A +LR R D + RG I+TRL
Sbjct: 61 AIPKRESALDCFVFNTVESFHDLPTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRL 120
Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQ 215
KL++ AI+LA AG+ R+ + E ++ E P+ GQGA+ IE N+ +
Sbjct: 121 QKLHDENFDAIILAKAGLSRMGWLENTTLKLEDISPELCLPAVGQGALAIECRENDKQIC 180
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
+++ I+HE+T V ER FL +L+G C+ IAGFA + F G+V +DG
Sbjct: 181 DMLASIHHEETGICVEAERVFLKKLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILS 240
Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G + + IG A+ + +
Sbjct: 241 AENIG--ENPMTIGNQVAEALLSEGADTII 268
>gi|296268254|ref|YP_003650886.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833]
gi|296091041|gb|ADG86993.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833]
Length = 303
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 6/297 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S +A + + L ++ ++T GD ++ LT++GG G+F
Sbjct: 4 PLRLGTRKSLMATSQSRRVAERLAQATGRRS---ELVGITTFGD-VSRAHLTQLGGTGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E+ LI+GE+D AVHS KD+PTK + I+A PR+D RD F+ +L
Sbjct: 60 VSELRNALIAGEVDFAVHSLKDLPTKGDDRIVIAAIPPRDDPRDAFVGR--VPFSELPPG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT S RR A L R D+ + RG +TRL K+ + + I+LA AG+ R+ +E+
Sbjct: 118 ARVGTGSPRRIAQLRMLRPDLEYVPIRGNADTRLGKVTSGELDGIVLAAAGLGRIGREEA 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++ +E P+PGQGA+ +E + EL+ I+ T D+V ER+ LA L+ C
Sbjct: 178 IAQVFEVEQVLPAPGQGALAVECRADRADLIELLSAIDDRATRDAVTAERSVLAALEAGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ + A G+ L V++ DG+ S +G A+ +GRD A +
Sbjct: 238 AAPVGAHASGDGNVLSLTAAVVSVDGRRSVRKSVSGPASAAMELGRDLAAAMLAEGA 294
>gi|332798468|ref|YP_004459967.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1]
gi|332696203|gb|AEE90660.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1]
Length = 293
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 109/294 (37%), Positives = 160/294 (54%), Gaps = 6/294 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK ++G+R S LAL S L + P + +I + T GD+ N + E+G KG
Sbjct: 2 KKIVKVGSRQSQLALVQTELVISQLKE--HFPQWDFKLITVKTTGDKFLNSNMYELG-KG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F +EIE+ L+SG ID AVHS KD+P +L +GL ISA RED RDVFIS + +L
Sbjct: 59 AFVKEIEEALLSGAIDMAVHSLKDVPHELPEGLAISAITRREDPRDVFISADDRRFSELD 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSS+RR L + R DI + RG I TR+ K+ I+LA AG+KRL E
Sbjct: 119 TGAKIGTSSMRRMCELNKLRQDIECVPIRGNINTRIKKIKTCGLDGIVLAAAGVKRLGME 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I + + ++ P+ GQGA+ +ET ++ + VK IN ++T + ERAF+ + G
Sbjct: 179 NLITDYFSPDEIVPAVGQGALAVETRADD-EMSLFVKYINDDETTCATGAERAFMKVVGG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
SCK + +A L G++ DG + G + +A IG A+ +
Sbjct: 238 SCKQPMGAYAEIFDDALKLIGMI-ERDG-VVKWGKLEGRKSEAEQIGIRLAEEL 289
>gi|221134062|ref|ZP_03560367.1| porphobilinogen deaminase [Glaciecola sp. HTCC2999]
Length = 328
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 37/324 (11%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L + P ++ ++P+STKGDRI + L ++GGKGLF +E+E + G
Sbjct: 1 MWQAEYVQAQLKAHY--PDMSVNLVPMSTKGDRILDTPLAKVGGKGLFIKELEVAMQEGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P + +G + A PRE+ D F+S+T + L +V+GTSSLRR+A
Sbjct: 59 ADIAVHSMKDVPVEFPEGFGLHAICPRENPFDAFVSNTYDDIDSLPKGAVVGTSSLRRQA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L R D+++ D RG + TRL KL+ + AI+LA AG+ RLK I+ ++ P
Sbjct: 119 QLRARRPDLTIKDLRGNVNTRLAKLDAGEYDAIILACAGLIRLKMHDRIRSEIDPLTSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE +N ++++ + +T V ERA A+L G C+ I FA +
Sbjct: 179 AVGQGAVGIECRDDNLALIDVLQCLACPETTIRVMAERAMNAKLQGGCQVPIGSFATLET 238
Query: 257 ST-----LYFYGIVLASDGKIFHEVS------------------------------RNGN 281
S LY G+V DG + E +
Sbjct: 239 SQDGYRELYLKGLVATVDGSVLLESDGSVILAKTAEEMMNDITDTSVTLNSPLEQIEEVH 298
Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305
AI +G+ A + ++
Sbjct: 299 IQQAIQLGQHIASQLIEQGAADIL 322
>gi|121713720|ref|XP_001274471.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL
1]
gi|119402624|gb|EAW13045.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL
1]
Length = 339
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F IGTR S LAL+ S+L + P + I T GDR T L E K
Sbjct: 13 SRKTFTIGTRSSKLALSQTDLIASALKK--RWPDYTFEIHSRETAGDRNTTIALREFTTK 70
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+T+E+E+ L++G++D VHS KD+PT L + RED RDV + SL
Sbjct: 71 NLWTQELEELLMAGDVDLIVHSLKDVPTLLPSSCTLGPMTEREDSRDVLVMKKGLPRMSL 130
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
++ SV+GTSS+RR A L R + + D RG I TRL KL+ I+LA AG+
Sbjct: 131 SEMPEGSVVGTSSIRRTAQLARRYPHLKIQDVRGNIGTRLAKLDAEDSPFTCIILAAAGL 190
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL + I + L+ ++ + GQGA+ +E ++ E+++ I H++T + ER
Sbjct: 191 LRLGLDDRITQYLDSKNGGMLYAVGQGALGVEIRKDDQLLHEMLQTIGHKETTLACLAER 250
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
+ L L+G C + + L +V++ DG+ E+ +G+ +A
Sbjct: 251 SLLRTLEGGCSAPLGVETEWVKDSTGASKLRMRAVVVSVDGRESAEIEVDGSIDTNEEAE 310
Query: 287 NIGRDAAQYIRFISNKNVFN 306
N G A+ + +
Sbjct: 311 NFGVTVAKSLVEKGAGKILE 330
>gi|84494981|ref|ZP_00994100.1| porphobilinogen deaminase [Janibacter sp. HTCC2649]
gi|84384474|gb|EAQ00354.1| porphobilinogen deaminase [Janibacter sp. HTCC2649]
Length = 329
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 8/304 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LA + L + H++ ++ ++T GDR L +GG G+F
Sbjct: 2 TLRLGTRRSALATTQSGWVADQLRAL----GHDVELVEITTDGDRDRTTPLATMGGTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L +G +D AVHS KD+PT L ++A PRED RD ++ +L +L
Sbjct: 58 VSALRDALRAGTVDLAVHSLKDLPTTPEDDLAVAAIPPREDPRDALVARDGLTLGELPSG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GT S RR+A L + + + RG ++TRL ++ + A++LA AG+ RL + V
Sbjct: 118 STVGTGSPRRRAQLEALGLGLDIRELRGNVDTRLGRVTSGDLDAVVLAQAGLARLGRTSV 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E+++ P+PGQGA+ +E ++ ++ V ++ DT V+ ERA L+EL+ C
Sbjct: 178 VTEVIDPIQMLPAPGQGALAVEVRADDAATRDAVAALDDADTRACVDAERAVLSELEVGC 237
Query: 245 KSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ + A G L +V + DG S G+ DA IGR A+ +
Sbjct: 238 SAPVGALAEIVLGDDGDELSLRAVVASPDGTGDIRRSATGSPTDADGIGRRLARLLLEDG 297
Query: 301 NKNV 304
++
Sbjct: 298 AADL 301
>gi|291298238|ref|YP_003509516.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728]
gi|290567458|gb|ADD40423.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728]
Length = 307
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 106/309 (34%), Positives = 162/309 (52%), Gaps = 9/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR SP+ALA A ++L + P + I+P +T GD+ L+++GG
Sbjct: 1 MSVK-VRIGTRSSPMALAQADRVSAALTAL--DPDVAVEIVPFTTSGDKWMG-PLSQLGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSL 118
KG FT+E++ L+ G D VH KD+P L +G I+A+L R+D+RD + SL
Sbjct: 57 KGAFTKEVDAALVEGTCDLCVHCVKDIPGDRDLPEGTVIAAHLERDDVRDALVHPGGLSL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL S IGTSS RR A L +S + RG TRL KL+ A+LLA +G++R
Sbjct: 117 SDLPDGSRIGTSSPRRAAQLALHWPRLSPLPIRGNANTRLAKLDAGDFDALLLAVSGLER 176
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I EIL+++ P+ G G + ++ ++ ++LV ++ T ER+ L
Sbjct: 177 LALTDRITEILDVDTMVPAIGSGTLALQCRTDDTPVRDLVARLDDPMTSWRTEAERSMLR 236
Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C S IAG+A + L +G V++ DG E +G DA +G A+ +
Sbjct: 237 ALNGHCHSPIAGYAIQESEGVLSLHGRVMSLDGSTVLEARESG--ADATALGTSVAEALL 294
Query: 298 FISNKNVFN 306
+ + +
Sbjct: 295 RQGARELID 303
>gi|332365713|gb|EGJ43471.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1059]
Length = 306
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISKREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA A KG ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQQLAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|238508247|ref|XP_002385322.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus
NRRL3357]
gi|220688841|gb|EED45193.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus
NRRL3357]
Length = 333
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 15/317 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RIGTR S LA+ A R SL P + I L T GD+ + L G K
Sbjct: 8 AQPPLRIGTRRSKLAIVQAEGIRDSLQK--TAPNRSYEIETLHTLGDKDKSTALYNFGAK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL
Sbjct: 66 SLWTSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
+ L +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG+
Sbjct: 126 QTLPEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGL 185
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+R+ + I + + +D + GQGA+ +ET + QEL+ + E + + ER
Sbjct: 186 ERIGLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAER 245
Query: 235 AFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG---NRCDAINI 288
A L L+G C I + L IV++ DG + + + + +A
Sbjct: 246 ALLRTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDGTQSVQDTIDATVRTKDEATVF 305
Query: 289 GRDAAQYIRFISNKNVF 305
G++ A + +
Sbjct: 306 GKELATRLVTAGADAIL 322
>gi|172061376|ref|YP_001809028.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6]
gi|171993893|gb|ACB64812.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6]
Length = 304
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 161/293 (54%), Gaps = 5/293 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G
Sbjct: 1 MWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I+ ++++ED PP
Sbjct: 119 MLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + ++ T +V ER L GSC+ +A A +
Sbjct: 179 AAGQGALGIEIAAHRTDVAAWLAPLHDPKTALAVEAERMVSRALGGSCEVPLAAHAVWRA 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306
LY G V +DG+ G DA+ +GR + + ++ N
Sbjct: 239 GELYLTGRVSTTDGQRVLTAEECGAVMTIADALALGRAVSDELEAQGALDIVN 291
>gi|255949632|ref|XP_002565583.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592600|emb|CAP98957.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 330
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 13/312 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R SL + P + I L T GDR L + G K L+
Sbjct: 10 PLRIGTRRSNLAVVQAEGIRDSLKRI--APERSYEIETLRTLGDRDQLTALYDFGAKSLW 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL+SGE+D VH KDMPT L +++A PR+D RD I S+K+L
Sbjct: 68 TTELEEKLVSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIVKSSLPYTSIKEL 127
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL KL+N ++ ++++ AG++R+
Sbjct: 128 PKGAVVGTSSVRRSAQLRRLYPYLRFANIRGNVETRLAKLDNPASEYTCMVMSAAGLERV 187
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
++ I + L +D + GQGA+ +E + K QEL+ + + + ER+ +
Sbjct: 188 GRKFRINQYLCSKDGGIFHAVGQGALGLEIRKGDTKTQELLDQLADRKSTLACLAERSLM 247
Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293
L+G C I + L +V++ DG E S +A +G+ A
Sbjct: 248 RTLEGGCSVPIGVETEWIRSDVLKITALVVSLDGSESVEDSLEARVQTVDEATELGKKIA 307
Query: 294 QYIRFISNKNVF 305
+ + +
Sbjct: 308 ARLVKAGAEAIL 319
>gi|302870086|ref|YP_003838723.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029]
gi|315503637|ref|YP_004082524.1| porphobilinogen deaminase [Micromonospora sp. L5]
gi|302572945|gb|ADL49147.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029]
gi|315410256|gb|ADU08373.1| porphobilinogen deaminase [Micromonospora sp. L5]
Length = 328
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 157/314 (50%), Gaps = 17/314 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + +L P + ++ + T GDR + + G G+F
Sbjct: 4 PLRLGTRGSALAMAQSGHVAEALTAATGRP---VELVEVVTAGDR--STAPVQRLGVGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L +GEID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALTAGEIDFAVHSYKDLPTAAAPGLHVAAVPPRQDPRDALVATNGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182
+ +GT +LRR A L + V RG ++TRL ++ + A++LA AG+ R+ +
Sbjct: 119 ARVGTGALRRIAQLHALGMQLEVSPIRGNVDTRLGRVLGPDADLDAVVLARAGLNRIGRA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+P QGA+ +E ++ EL+ +++H + ++ ERA LA L+
Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDQDVIELLALLDHAPSRAAITAERALLATLEA 238
Query: 243 SCKSAIAGFAYCKGS----------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
C + +A +A +Y G V++ DG +SR G DA IG+
Sbjct: 239 GCSAPVAAYAVLAEGEPTDEGDVNQEIYLRGAVISPDGTRDLRLSRTGTPADAAEIGKAL 298
Query: 293 AQYIRFISNKNVFN 306
A + + ++
Sbjct: 299 AAELLELGADSILG 312
>gi|325286453|ref|YP_004262243.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489]
gi|324321907|gb|ADY29372.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489]
Length = 525
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 154/307 (50%), Gaps = 9/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + I+ + + GD ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSELALYQANRVKSELETL----GFKTKIVAVKSAGDLELDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT ++ ++ GEID AVHS KD+PT L KG+ +A L R +++D + +
Sbjct: 56 TGIFTRTLDIAMLKGEIDIAVHSLKDVPTVLPKGIVQAAVLERGNVKDTLVYKNNEEFLG 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRL 179
VI TSSLRRKA L V D RG + TRL KL +++ + + A AGI RL
Sbjct: 116 ARDG-VIATSSLRRKAQWLNRYPTHKVEDIRGNVNTRLQKLEDSETWNGAIFAAAGIGRL 174
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+E +N++ P+PGQGAI + + + + + INH +T ER FL
Sbjct: 175 NL--RPEEAVNLDWMIPAPGQGAIMVTAKEDEEEILAICEEINHRETEICTTIERTFLNR 232
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C + I AY K + F ++L+ DG EV R D N+ +AA+++
Sbjct: 233 LEGGCTAPIGALAYIKSEQVIFRAVLLSPDGTKKIEVDRLVKLGDHNNLAIEAAEHVLER 292
Query: 300 SNKNVFN 306
K +
Sbjct: 293 GGKYIME 299
>gi|169784578|ref|XP_001826750.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83775497|dbj|BAE65617.1| unnamed protein product [Aspergillus oryzae]
Length = 333
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 15/317 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RIGTR S LA+ A R SL P + I L T GD+ + L G K
Sbjct: 8 AQPPLRIGTRRSKLAIVQAEGIRDSLQK--TAPNRSYEIETLHTLGDKDKSTALYNFGAK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL
Sbjct: 66 SLWTSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
+ L +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG+
Sbjct: 126 QTLPEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGL 185
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+R+ + I + + +D + GQGA+ +ET + QEL+ + E + + ER
Sbjct: 186 ERIGLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAER 245
Query: 235 AFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG---NRCDAINI 288
A L L+G C I + L IV++ DG + + + + +A
Sbjct: 246 ALLRTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDGTQSVQDTIDATVRTKDEATVF 305
Query: 289 GRDAAQYIRFISNKNVF 305
G++ A + +
Sbjct: 306 GKELATRLVTAGADAIL 322
>gi|310794330|gb|EFQ29791.1| porphobilinogen deaminase [Glomerella graminicola M1.001]
Length = 347
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 144/317 (45%), Gaps = 18/317 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA+ A L P + I + T GD+ L GGKGL+T
Sbjct: 13 IHVGTRKSALAMKQAEIVVEGLSKAR--PDVSFEIHGMQTLGDKDQITALYNFGGKGLWT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-------QSL 118
E+E KL + EID VHS KDMPT L G + RED RDV + ++L
Sbjct: 71 SELEAKLAAKEIDIIVHSLKDMPTTLPDGCTLGCVTKREDPRDVVVFKAGLAEKHGWKTL 130
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
DL SVIGTSS+RR A L R + D RG IETRL K ++ AI+LA AG+
Sbjct: 131 ADLPEGSVIGTSSVRRIAQLKRRYPGLKFADVRGNIETRLRKCDDPEGPFSAIILAAAGL 190
Query: 177 KRLKKEKVIKEILNIEDF--PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R+ I + L E+ + GQGA+ IE + + ++K + + T + ER
Sbjct: 191 LRMDYGARISQFLESENSGTLHAVGQGALGIEARTGDERVLAVIKELEDKPTMLACFAER 250
Query: 235 AFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIG 289
+ + L+G C I G L V+ +DG + V +A + G
Sbjct: 251 SVMRTLEGGCSVPIGVETTWVEDGKKLRLKATVVHADGTRGVDTEMVEVITTAEEADDFG 310
Query: 290 RDAAQYIRFISNKNVFN 306
+ AQ + + + +
Sbjct: 311 KVVAQALVDRGAQQILD 327
>gi|297197348|ref|ZP_06914745.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
gi|297146690|gb|EDY58887.2| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
Length = 314
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 151/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA RS L ++ P ++P+ T GD+ L+++ GKG FT
Sbjct: 10 IRIVSRDSPMALAQVERVRSELTALY--PGVRTEVVPVRTTGDKWMGD-LSKVEGKGAFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L
Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTTFAAFLKRDDIRDALIHPGGLTLDELPE 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++
Sbjct: 127 GTRVGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLEAGEADALLLAVAGLERIGRQD 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + + + V + DT+ ER FL L G
Sbjct: 187 VISEVLSPETMMPPIGAGILGLQCREGDTELIDAVSALGDPDTYREATAERMFLHVLQGH 246
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A G L V DGK R D +G A + +
Sbjct: 247 CNSPIAGYARVDHGDELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 306
Query: 303 NVFN 306
+ +
Sbjct: 307 EIID 310
>gi|50291395|ref|XP_448130.1| hypothetical protein [Candida glabrata CBS 138]
gi|55976396|sp|Q6FNR4|HEM3_CANGA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49527441|emb|CAG61081.1| unnamed protein product [Candida glabrata]
Length = 329
Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 145/321 (45%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ IG R S LA+ + R + K P ++ + L T GD+I + L GG
Sbjct: 1 MTRESINIGGRRSKLAVVQSNHVRDLVQA--KFPQYDCTVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKL----ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
K L+T+E+E L +D VHS KDMPT L G ++ R D D +
Sbjct: 59 KALWTKELEDYLYCEDQEKRLDLIVHSLKDMPTLLPDGFELGCVTKRVDPTDCIVMPRGS 118
Query: 117 S---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
L DL +V+GTSS+RR A L R + RG I TRL KL++ ++L
Sbjct: 119 PHRCLADLPEGAVVGTSSVRRSAQLKRKFPHLKYQSVRGNIHTRLEKLDDPEGPFQCLVL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + L+ + + GQGA+ IE + K +++ I ++
Sbjct: 179 ASAGLVRMGLEDRITQRLHSDIMYHAVGQGALGIEIRQGDKKILQILDEIADLESTVCCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFH----EVSRNGNRCDA 285
ER+ + L+G C I + T L GIV+ +G + EV N R D+
Sbjct: 239 AERSLMRTLEGGCSVPIGVESSYDHKTKKLLLKGIVVNVEGTMAIEDQQEVVVNDIREDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
I G A + K + +
Sbjct: 299 IKCGVLLAHKMIKDGAKKILD 319
>gi|257452372|ref|ZP_05617671.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
gi|317058915|ref|ZP_07923400.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
gi|313684591|gb|EFS21426.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
Length = 299
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 164/301 (54%), Gaps = 6/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K+ +G+R S LALA + L H P + I + T+GD+ + ++
Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L
Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR
Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++++ + ER F
Sbjct: 179 VKLEEKITEYLDPTVFPPAPAQGALYIQCREEDIEVQKILQSIHNKNLEKVLVVEREFSK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + ++ +G TL F+ + + + ++ N +I R AAQ I
Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHENKR--YQTKVVENLSKGKDIARMAAQKIEK 296
Query: 299 I 299
+
Sbjct: 297 M 297
>gi|226948193|ref|YP_002803284.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto]
gi|254800244|sp|C1FVB9|HEM3_CLOBJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226840754|gb|ACO83420.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 103/293 (35%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGISLAEHILK 289
>gi|154505786|ref|ZP_02042524.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149]
gi|153793804|gb|EDN76224.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149]
Length = 295
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 156/300 (52%), Gaps = 6/300 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG+R S LA+ + + P + I+ + T GDRI +R+L +IGGKG
Sbjct: 2 KTVIRIGSRESRLAVTQTEIIKGQIEA--HFPHIRVEIVTMKTTGDRILDRSLEQIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L G +D +VHS KDMP + + L I AY RED RDV I Q+ +
Sbjct: 60 LFVKELDQALRKGRVDLSVHSLKDMPMDIPEDLPILAYSKREDPRDVLIFRQGQT--ESI 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+IGTSS RR+ L R D RG ++TRL KL A +LA AG+KRL +
Sbjct: 118 SGGMIGTSSKRRRLQLERLYPDCHFQGIRGNVQTRLRKLEEEGFCATVLAAAGLKRLGMD 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + E+ P+ GQG + ++ + QEL++V+N + + ERAF+ L+G
Sbjct: 178 SCIGRYFSCEEMIPAAGQGILAVQARAG--EYQELLEVLNDPRSEAAAKAERAFVKVLNG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S +A +A +GS + G+ + + +GN+ +A +G A ++ K
Sbjct: 236 GCTSPVAAYAEIRGSKCHITGLYWRESDENWFVEKTSGNKKEAELLGETLAHNMQKKYGK 295
>gi|73666979|ref|YP_302995.1| porphobilinogen deaminase [Ehrlichia canis str. Jake]
gi|123773372|sp|Q3YSA8|HEM3_EHRCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72394120|gb|AAZ68397.1| Porphobilinogen deaminase [Ehrlichia canis str. Jake]
Length = 298
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 108/292 (36%), Positives = 157/292 (53%), Gaps = 5/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA E + L P NI ++ + T GD + IGGKGLF
Sbjct: 3 IRIGTRGSVLALAQTLEVTNLL--NRYFPEINIQVVKIKTSGDINNKVPINTIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G++D AVHS KD+P GL I L R DVF+S QS+K L +++
Sbjct: 61 KEIEEALLIGKVDLAVHSVKDIPAFYCDGLIIPCVLKRSSPYDVFVSSKYQSIKSLPINA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RRK L R D+ VI RG I+TR+ K + + I+LA AG+ R+ K VI
Sbjct: 121 TVGTSSIRRKVQLNYLRPDLQVIPVRGNIDTRILKSDIGEFDGIVLAEAGLIRINKCNVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KE+L+ + + GQGAIC++ ++ +KV+N ++ V ER+FL ++GSC
Sbjct: 181 KEVLDSKIMLSAVGQGAICVQCRADDYNIINKIKVLNCHKSYVCVIAERSFLKTINGSCD 240
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A A Y T+Y ++ K C+A G D + +
Sbjct: 241 TPLAALAQYVDSDTIYMSCMLSNE--KEMVFSDCYFKECNAEESGIDMGKKL 290
>gi|86141058|ref|ZP_01059617.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217]
gi|85833000|gb|EAQ51449.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217]
Length = 305
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 93/303 (30%), Positives = 151/303 (49%), Gaps = 6/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L ++ + +I + + GD I ++ L E+G G+
Sbjct: 3 KTIRIGTRDSELALWQAHTVQDQLENL----GYKTELISVKSTGDLILDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +I+G++D AVHS KD+PT+L G+ A LPR D+F+ ++ D
Sbjct: 59 FTKTLDVAMINGDVDIAVHSMKDVPTQLPNGIVQGAVLPRAATEDIFVFKKDKNATDFTK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRRKA L V+D RG + TRL K+ +N + A AG++R+ +
Sbjct: 119 SVTIATGSLRRKAQWLNKYPKHQVVDLRGNVNTRLQKVADNDWAGAVFAKAGLERINLKP 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E+L + P+P QGA+ I N+ +E +N D + ER FL +L+G
Sbjct: 179 ENHEVL--DWMIPAPAQGAMVIAVMDNDAFCKEACAKLNDADAALTTKVEREFLRKLEGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + I A + ++F+G + + DG E+ + + ++ G A I +
Sbjct: 237 CTAPIGAIAKIEDDHIHFHGALFSLDGTQKLEIKESIPVSECLDFGALCALKILEEGGRE 296
Query: 304 VFN 306
+
Sbjct: 297 LME 299
>gi|153939780|ref|YP_001390273.1| porphobilinogen deaminase [Clostridium botulinum F str. Langeland]
gi|166201504|sp|A7GBW3|HEM3_CLOBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152935676|gb|ABS41174.1| hydroxymethylbilane synthase [Clostridium botulinum F str.
Langeland]
gi|295318368|gb|ADF98745.1| hydroxymethylbilane synthase [Clostridium botulinum F str. 230613]
Length = 290
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPKREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ E +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLEHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 289
>gi|51473654|ref|YP_067411.1| porphobilinogen deaminase [Rickettsia typhi str. Wilmington]
gi|55976371|sp|Q68WR3|HEM3_RICTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51459966|gb|AAU03929.1| Porphobilinogen deaminase [Rickettsia typhi str. Wilmington]
Length = 299
Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats.
Identities = 102/297 (34%), Positives = 158/297 (53%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRNSTLALIQTNLVIAQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ L I+A L RED RDV + +S++ L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDIPGRIPVDLVIAAVLEREDPRDVLVCLNYKSIETLPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+++ FRG +++R+ KL + A +L+YAG+KRL K
Sbjct: 123 VIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDATILSYAGLKRLNAFNKK 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ + INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQILPCVGQGVIAVEIRKDDNAMFNICNQINHIPTFELIKPERAFLEHLDANC 242
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ I ++ Y + ++ D KI + N + G AA+ +
Sbjct: 243 STPIGAYSQYLDAYNIQTDFMLGKLDCNKIIFQTEIT-NINTSRECGIKAAKMMLAQ 298
>gi|306819824|ref|ZP_07453478.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304552071|gb|EFM40008.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 301
Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 155/306 (50%), Gaps = 7/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ + RI R S LAL L +K N I+ + T GD+ L+EIG
Sbjct: 1 MKMQTVRIAGRKSKLALVQTQRVIDLLKQKYK--DVNFEIVTVETLGDKNLKEKLSEIGT 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119
KGLFT EIE+ L++G +D AVHS KDMPT ++ L+I AY+ RE +DV + + +S+K
Sbjct: 59 KGLFTFEIEQMLLNGSVDMAVHSLKDMPTDFIRDLKIGAYIKRESNKDVIVFNKDYKSVK 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL ++ IGTSSLRR+ + + D V + RG I TRL ++ + AI+LA + RL
Sbjct: 119 DLPKNAKIGTSSLRREVQIKKLGKDFEVANIRGNIHTRLKRMKDENFDAIILAKVALTRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + F + GQG IC++ +N K +++++ +N +T V ER FL
Sbjct: 179 NLQDELVFEELP--FVSAAGQGCICVQVKKDNKKIEKMLEFLNDAETQSCVMAEREFLHT 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ G C + + + G Y V + DGK + D N+G+ AQ +
Sbjct: 237 IGGGCHTPVGAYCEKIGQIYRIYAFVSSLDGKKYLSCEI--KSKDTENLGKQTAQRLIAK 294
Query: 300 SNKNVF 305
+
Sbjct: 295 GADKIV 300
>gi|254382514|ref|ZP_04997873.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1]
gi|194341418|gb|EDX22384.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1]
Length = 322
Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 17/314 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR S LA++ + ++ + P + ++ ++T GD ++ L +IGG G+
Sbjct: 7 QPLRLGTRRSKLAMSQSGHVADAVRAITGRP---VELVEITTYGD-VSREHLAQIGGTGV 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L+ GEID AVHS KD+PT L I+A PRED RD ++ + + L
Sbjct: 63 FVTALRDALLRGEIDFAVHSLKDLPTTQPDDLVIAAMPPREDPRDALVARDGLTFEQLPD 122
Query: 124 HSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +GT S RR A L I + RG ++TR+ + N + A++LA AG+ R+
Sbjct: 123 GARVGTGSPRRMAQLNHAARALGKRIETVAIRGNVDTRIGFVRNGELDAVVLAAAGLNRI 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L+++ P+PGQGA+ +E ++ + + ++ T +V ER+ LA
Sbjct: 183 GRSDEATDFLSVDSVLPAPGQGALAVECLASDAELIAALAELDDPHTRAAVTAERSLLAA 242
Query: 240 LDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGR 290
L+ C + + A + G+V DG ++S G DA+ +GR
Sbjct: 243 LEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGTTLVQLSTTGPVPQSYDDAMALGR 302
Query: 291 DAAQYIRFISNKNV 304
+ A + +
Sbjct: 303 ELADEMLAKGAAGL 316
>gi|157825828|ref|YP_001493548.1| porphobilinogen deaminase [Rickettsia akari str. Hartford]
gi|166217781|sp|A8GNR5|HEM3_RICAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157799786|gb|ABV75040.1| porphobilinogen deaminase [Rickettsia akari str. Hartford]
Length = 301
Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 109/296 (36%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRNSPLALIQTNLVIQQIKQF--FPDINCAIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L ISA L RED RDVF+ +S+K+L HS
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEELVISAVLEREDPRDVFVCLNYKSIKELPQHS 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAYAG+KRL
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTIFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E N+ E+ INH T + + ERAFL LD +C
Sbjct: 183 YCHLIEYSHMLPCVGQGVIAVEIRQNDNSMLEICNQINHLPTCELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ I ++ Y + ++ D + N + G AA+ +
Sbjct: 243 RTPIGTYSQYLDADNIQTDFMLGNPDCSKITFHTEITNIKTSKEGGIKAAKMMLNQ 298
>gi|157803668|ref|YP_001492217.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel]
gi|166217783|sp|A8EYJ9|HEM3_RICCK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157784931|gb|ABV73432.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel]
Length = 301
Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 104/295 (35%), Positives = 162/295 (54%), Gaps = 4/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL + +P N I+P++T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIQTNLVIQQIKQF--VPDINYKIVPITTSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEDLIIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
+IG+S++RRK + + RSD+ V FRG +++R+ KL N + A +LAYAG+KRL
Sbjct: 123 IIGSSAVRRKTFIEKIRSDLKVTVFRGNVDSRIKKLMNGEVDATILAYAGLKRLNAFNPQ 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLETCNQINHLTTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
++ IA ++ Y + ++ + + N + G AA+ +
Sbjct: 243 RTPIAAYSKYLDKDNIETDFMLGNLESSKITFHTETTNIKTSKEAGIKAAKIMLS 297
>gi|187778036|ref|ZP_02994509.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC
15579]
gi|187774964|gb|EDU38766.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC
15579]
Length = 295
Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA SL H + + T GD+I +L +IGGKGLF
Sbjct: 8 FVIATRRSKLAQVQTEIIIDSLNKKH---DIECEKLLIETIGDKILEVSLDKIGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 65 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 125 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 185 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A K + ++ GI + + G + +G A++I
Sbjct: 244 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 294
>gi|297172436|gb|ADI23410.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0770_28K04]
Length = 311
Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 104/300 (34%), Positives = 155/300 (51%), Gaps = 4/300 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F +GTR S L+LA S L + P I ++T GD T R L I KG+F
Sbjct: 2 TFLVGTRGSKLSLAQTNWVISELQK--QNPGSEFEIKTITTNGDTDT-RALFTIDQKGIF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L+
Sbjct: 59 EKEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGFNLKTIPLN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL V
Sbjct: 119 AVVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGL-DV 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C
Sbjct: 178 KHSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIESERALSDYVESGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A L + DGK + + G+ N+G+ + ++ I +
Sbjct: 238 RFPVGALAIANSGMLKLTVTAYSVDGKKSITIEKTGDIDKPRNLGQGVGEELQKIGIAEI 297
>gi|115399989|ref|XP_001215583.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
gi|114191249|gb|EAU32949.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
Length = 337
Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 151/321 (47%), Gaps = 19/321 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R SL V P + I+ L T GDR L G K
Sbjct: 9 QPPLRIGTRRSNLAMVQAEGIRDSLQKV--APDRSYEIVALRTLGDRDKQTALYNFGAKN 66
Query: 63 LFTEEIEKKLISGEIDCAVHSA------KDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
L+T E+E+KL SGE+D VH DMPT L Q++A PR+D RD I
Sbjct: 67 LWTTELEEKLTSGELDVIVHCLKDQLTAPDMPTTLPDTCQLAAIPPRDDPRDALIVKASL 126
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
SL+ L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ +++
Sbjct: 127 PYTSLQSLPAGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIM 186
Query: 172 AYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+ AG++R+ + I + L D + GQGA+ +E + + EL+ + + +
Sbjct: 187 SAAGLERVGLQYRINQYLGSRDGGILHAVGQGALGLEIRKGDAQMLELLGQLADRKSTLA 246
Query: 230 VNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDA 285
ER+ + L+G C I L + IV++ DG E S G +A
Sbjct: 247 CLAERSLMKTLEGGCSVPIGVETEWLSSGDLRMHSIVVSLDGTQCVEDSITSKVGTDDEA 306
Query: 286 INIGRDAAQYIRFISNKNVFN 306
G + A + + N
Sbjct: 307 AAFGEELAARLVKAGAGQILN 327
>gi|323353345|ref|ZP_08087878.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66]
gi|322121291|gb|EFX93054.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66]
Length = 306
Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQTLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|297192867|ref|ZP_06910265.1| porphobilinogen deaminase domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151527|gb|EFH31219.1| porphobilinogen deaminase domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
Length = 319
Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + ++ + + ++ ++T GD ++ L +IGG
Sbjct: 1 MTERALRLGTRRSKLAMAQSGQVAEAVRRLS---GRAVELVEITTYGD-VSREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L GE+D AVHS KD+PT L ++A RED RDV I+ S +
Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELALAAVPKREDPRDVLIARDGLSFER 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L + + RG ++TR+ + N + A++LA AG+
Sbjct: 117 LPNGARIGTGSPRRMAQLNAYARTHGLTIETVPIRGNVDTRIGFVRNGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + L+++ P+PGQGA+ IE ++ + ++ T +V ER+
Sbjct: 177 NRIGRTDEVTDFLSVDFVLPAPGQGALAIECSASDADLVATLAGLDDPHTRVAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A G + G+V +DG ++S G DA
Sbjct: 237 LAALEAGCSAPVGALADLLGDGQEFTEMRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+GR+ A + +
Sbjct: 297 LGRELADEMLAKGAAGL 313
>gi|324990199|gb|EGC22137.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK353]
Length = 306
Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 KGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQNHQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|148378912|ref|YP_001253453.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502]
gi|153934281|ref|YP_001383295.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397]
gi|153936114|ref|YP_001386843.1| porphobilinogen deaminase [Clostridium botulinum A str. Hall]
gi|166201502|sp|A7FSG8|HEM3_CLOB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201503|sp|A5I0B2|HEM3_CLOBH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148288396|emb|CAL82473.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502]
gi|152930325|gb|ABS35825.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397]
gi|152932028|gb|ABS37527.1| hydroxymethylbilane synthase [Clostridium botulinum A str. Hall]
Length = 290
Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ ++LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGVILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGISLAEHILK 289
>gi|315925350|ref|ZP_07921561.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621251|gb|EFV01221.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 309
Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 147/300 (49%), Gaps = 6/300 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +G+R S LA+ L H P + ++TKGDR ++ L IG KGL
Sbjct: 2 KKIVVGSRGSKLAVTQTNWLIERLAAAH--PDIAFELKIITTKGDRNQHQALDAIGDKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLA 122
FT E+E +L+SGEI AVHS KDMP+ L +GL ++ RED DV ++ SL DL
Sbjct: 60 FTAELEAELLSGEIQMAVHSMKDMPSALPEGLCLTVPPMREDPADVLVTPHGAASLDDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIG+ S RR L R D+ + RG I+TR+ KL + I+LA AG++RL
Sbjct: 120 EGAVIGSGSKRRVFQLKALRPDLQTVGIRGNIDTRIRKLFDEHLDGIVLAAAGMRRLNVY 179
Query: 183 KVIKEILNI---EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
L F P+P QG + +E +N + + L+ I+ E + ER+FL
Sbjct: 180 DAADYHLVPLLPPAFVPAPAQGILAVEIREDNAEVKALMAAISDETARVQMAAERSFLTA 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDG C I + G + YG+ G + S G DA +G A+ +R
Sbjct: 240 LDGDCHLPIGAYCEAAGDAITLYGLYGDEAGTRLVKGSAAGRAADAERLGAQLAEQLRKA 299
>gi|99034622|ref|ZP_01314577.1| hypothetical protein Wendoof_01000608 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 302
Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats.
Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 13 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L +
Sbjct: 71 KEIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 131 TIATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 187
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 188 TEVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 247
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + L+ ++ + GK + R DA +G DA ++
Sbjct: 248 TPLAALAEYVSENMLHLRCMLAS--GKNIYFTERTSFIEDAEKMGMDAGLELKSK 300
>gi|170757497|ref|YP_001780553.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra]
gi|229836107|sp|B1IHD1|HEM3_CLOBK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169122709|gb|ACA46545.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra]
Length = 290
Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats.
Identities = 103/293 (35%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 289
>gi|332360583|gb|EGJ38393.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1056]
Length = 306
Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCVF-VSLQG--QDGQQLAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|295131995|ref|YP_003582671.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87]
gi|294980010|gb|ADF50475.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87]
Length = 304
Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats.
Identities = 90/303 (29%), Positives = 149/303 (49%), Gaps = 10/303 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LAL A +S+L + H ++P+ + GD + L E+G G
Sbjct: 2 NKVIRIGTRDSELALWQAKTVQSALEKL----GHQTELVPVKSTGDLNLDVPLYEMGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ +++G++D AVHS KD+PT L KG+ +A L R + +D+ H L
Sbjct: 58 IFTKTLDIAMLTGKVDIAVHSMKDVPTALPKGIVEAAVLKRANTKDIL-IHKGTDF--LD 114
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
I T SLRRK+ L V+D RG + TR+ KL ++ + + A AG++R++ +
Sbjct: 115 AQGTIATGSLRRKSQWLHRYPTHEVVDLRGNVNTRMQKLEDSNWNGAIFAAAGLERIEIK 174
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++++ P+P QGA+ + + + + +NH T V+ ER FL L+G
Sbjct: 175 PEN--FIDLDWMIPAPAQGAMLVVALEKDEFTRTAIGALNHYQTDLEVHVEREFLRTLEG 232
Query: 243 SCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + I A L+F G + + DG EV + + G+ A+ I
Sbjct: 233 GCTAPIGALAKIDNDNILHFKGALFSLDGSQKIEVEKRIAADNVAEFGKFCAKEILAKGG 292
Query: 302 KNV 304
+
Sbjct: 293 AKL 295
>gi|167569219|ref|ZP_02362093.1| porphobilinogen deaminase [Burkholderia oklahomensis C6786]
Length = 280
Score = 311 bits (798), Expect = 8e-83, Method: Composition-based stats.
Identities = 102/270 (37%), Positives = 156/270 (57%), Gaps = 2/270 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274
+ +A A +G L+ G V +DG+
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGRRVL 280
>gi|255526355|ref|ZP_05393269.1| porphobilinogen deaminase [Clostridium carboxidivorans P7]
gi|255509932|gb|EET86258.1| porphobilinogen deaminase [Clostridium carboxidivorans P7]
Length = 290
Score = 311 bits (798), Expect = 8e-83, Method: Composition-based stats.
Identities = 99/295 (33%), Positives = 155/295 (52%), Gaps = 6/295 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR S LA L + H + + + T GD+I + +L++IGGKGLF
Sbjct: 2 KLKIATRRSQLAQVQTETIMKILKENHNV---EAEKLLVETTGDKILDVSLSKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ + D AVHS KD+P + I + PRED+RD F+S K+L
Sbjct: 59 IKEIEVALLEDKADAAVHSMKDVPFDVPDMFDIVSIPPREDVRDAFVSMNGVHFKELKKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS RR A + R D+ ++ RG ++TR++K+ I+LA AG+KR+ E +
Sbjct: 119 AKIGTSSNRRAAQVKLLRPDLEIVPIRGNVQTRISKIEKENLDGIILAAAGLKRMNMENI 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ + P+ GQGA+ IET N+ +++ K + E+T V ER+F+ L+G C
Sbjct: 179 ITDYFDVNEMVPAVGQGALGIETKKNSVN-EDIFKKMEDENTRICVEAERSFMRTLNGDC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A +T+ GI D + GN+ D + +G A+ I
Sbjct: 238 HSTIGAYAQINENTISIIGIFQVGD--NLIKRDIAGNKEDYMELGYKLAKKIIEA 290
>gi|146419731|ref|XP_001485826.1| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC
6260]
Length = 371
Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 153/319 (47%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +IG R LA+A + + L V K P I+ LST GD+I ++ L GGK
Sbjct: 8 TTKHIQIGGRKLTLAVAQSNIVKKHL--VAKFPQLKCSILALSTLGDQIQSQPLYLFGGK 65
Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
L+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV +
Sbjct: 66 ALWTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRLDPRDVLVMRKGS 125
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171
+SL +L +++GTSS+RR + L++ + RG I TR+ KL+ +LL
Sbjct: 126 KYKSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLL 185
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++R+ + I L+ D + GQGA+ +E + + ++L++ I T +
Sbjct: 186 AAAGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAIEDVPTSLCCH 245
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN---GNRCDAI 286
ER+ + L+G C I +T L F IV++ DG F E + +A
Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVEDKIEMKVTTKSEAD 305
Query: 287 NIGRDAAQYIRFISNKNVF 305
+G+ + K +
Sbjct: 306 ALGQQLGDKLIAKGAKEIL 324
>gi|42520403|ref|NP_966318.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410142|gb|AAS14252.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 292
Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats.
Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 3 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L +
Sbjct: 61 KEIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 121 TIATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 178 TEVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + L+ ++ + GK + R DA +G DA ++
Sbjct: 238 TPLAALAEYVSENMLHLRCMLAS--GKNIYFTERTSFIEDAEKMGMDAGLELKSK 290
>gi|83945095|ref|ZP_00957461.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633]
gi|83851877|gb|EAP89732.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633]
Length = 320
Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 171/302 (56%), Gaps = 8/302 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLA+A + ++ L H K P + I+ ++T GDRIT+R L GGKGLFT
Sbjct: 8 IATRTSPLAMAQTLDVQARLAKAHGEKDPEESFPILGMTTTGDRITDRALLLAGGKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLALH 124
+E+E+ L+ G+ AVHS KD+PT L GL+I+ L RED RD ++ S ++DL
Sbjct: 68 KELERALLDGDARFAVHSMKDVPTTLPDGLEIACVLEREDPRDTLLTRDGISRIEDLPQG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S+RR++ L R D++++ RG ++TRL KLN+ + A LA AG++RL +E+
Sbjct: 128 ATLGTASIRRQSQALALRPDLNIVLLRGNVDTRLEKLNSGEVDATFLARAGLRRLGREQA 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L + P+P QGA+ IE ++ +A++ ++ +NH T ++ ER FL LDGSC
Sbjct: 188 ELPPLELTAVIPAPAQGAVGIEIRSDDVEARKALEPLNHLPTRIAIAAERGFLQALDGSC 247
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-----NRCDAINIGRDAAQYIRFI 299
++ IA A +G+ ++ G L DG + A +G + ++
Sbjct: 248 RTPIAAHATLEGAEIHLRGEALMPDGSKRWANETRAQLPELDPDAARLLGYELGLEVKRA 307
Query: 300 SN 301
Sbjct: 308 GG 309
>gi|227545398|ref|ZP_03975447.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A]
gi|300908522|ref|ZP_07125985.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112]
gi|112944692|gb|ABI26362.1| porphobilinogen deaminase [Lactobacillus reuteri]
gi|227184680|gb|EEI64751.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A]
gi|300893929|gb|EFK87287.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112]
Length = 305
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 154/308 (50%), Gaps = 7/308 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +G+R S LA+A +SL ++ P I + T+GDR +L +IGG
Sbjct: 1 MTDKVI-VGSRKSKLAMAQTKLVIASLKEL--FPTTQFEIKNVITEGDRNQQASLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119
KG+F +EIE++L + ID AVHS KD+ L L + A+ R D +S SL
Sbjct: 58 KGVFVKEIEEELKNCTIDFAVHSLKDVMPVLPDELTLGAFPKRVSPFDCLVSRQEFTSLD 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + IGT+SLRR+ LL R D+ +I RG I+TRL K++ ++LA AG+ RL
Sbjct: 118 ALPHGARIGTNSLRRQGQLLNVRPDLKIIPIRGNIDTRLKKIDTENLAGVVLAEAGLDRL 177
Query: 180 KKEKVIKEILNI-EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ L++ + P+ GQG + IE + + ++++ IN + ++ ER F+
Sbjct: 178 SIDLSSYHQLSLKDIIVPAVGQGCLAIECRKADERVRKMLDQINDPQSAKCIHIEREFMR 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL GSC I G AY + + F G++ + +G+ + +G+ A +
Sbjct: 238 ELGGSCNFPIGGHAYLQDQQIVFDGLIASPNGEHLIK-EVAVPANKP-GVGKVVADQLLA 295
Query: 299 ISNKNVFN 306
N +
Sbjct: 296 KDNFGIIE 303
>gi|282865645|ref|ZP_06274696.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
gi|282559689|gb|EFB65240.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
Length = 328
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 17/315 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP R+GTR S LA+A + ++ +V + ++ ++T GD ++ L +IGG G
Sbjct: 12 TKPLRLGTRRSKLAMAQSGMVADAVREVT---GRAVELVEITTYGD-VSREHLAQIGGTG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + L GE+D AVHS KD+PT +GL ++A RED RDV ++ + L
Sbjct: 68 VFVAALREALARGEVDFAVHSLKDLPTTQPEGLVLAAVPVREDPRDVLVARDGLTFAQLP 127
Query: 123 LHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ IGT S RR A L D+ + RG ++TR+N + + A++LA AG+ R
Sbjct: 128 SGARIGTGSPRRMAQLNAYARSHGLDMETVAIRGNVDTRINFVRTGELDAVVLAAAGLSR 187
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + + + L+ + P+PGQGA+ IE ++ + + ++ T +V ERA LA
Sbjct: 188 LGRTGEVTDFLSTDTVLPAPGQGALAIECAEDSTELAAALAELDDPHTRVAVTAERALLA 247
Query: 239 ELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIG 289
L+ C + + A L G+V ++DG ++S G+ DA G
Sbjct: 248 ALEAGCSAPVGALADLLADGQIVNELRLRGVVGSTDGTSLVQLSITGSVPTSHDDAAAFG 307
Query: 290 RDAAQYIRFISNKNV 304
R+ A + +
Sbjct: 308 RELASEMLAKGAAGL 322
>gi|170759533|ref|YP_001786306.1| porphobilinogen deaminase [Clostridium botulinum A3 str. Loch
Maree]
gi|238058921|sp|B1KY15|HEM3_CLOBM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169406522|gb|ACA54933.1| hydroxymethylbilane synthase [Clostridium botulinum A3 str. Loch
Maree]
Length = 290
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 103/293 (35%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIVKKEITGTKDQYEKLGIALAEHILK 289
>gi|126662834|ref|ZP_01733833.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38]
gi|126626213|gb|EAZ96902.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38]
Length = 305
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 9/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L D+ + II + ++GD I ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSELALWQAHTVQKKLNDL----GYKTEIIAVKSQGDIILDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G++D AVHS KD+PT L G+ +A L R + D+ + +L
Sbjct: 56 TGIFTKTLDIGMLNGQVDIAVHSMKDVPTALPIGIVQAAVLERANTLDILVHKG--NLDF 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L I T SLRR+A L + V+D RG + TR+ KLN ++ + + A AG++R+
Sbjct: 114 LTSSGTIATGSLRRQAQWLNKYPNHKVVDLRGNVNTRMQKLNESEWNGAVFAAAGLERIN 173
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++++ P+P QGA+ + + E + +N +T ER FL L
Sbjct: 174 IKPENY--IDLDWMTPAPAQGAMVVVAMEKDTYCTEALAKLNDRETEICTFIERQFLKTL 231
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A + F G++ + +GK H + ++ N N G D A+ I
Sbjct: 232 EGGCSAPIGALAKFTTENIEFEGVLFSLNGKEKHIIKKSCNFDSYKNFGADCAKEILNNG 291
Query: 301 NKNVFN 306
+
Sbjct: 292 GAALME 297
>gi|328945742|gb|EGG39893.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1087]
Length = 306
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + +I+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDSIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + ++L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDKELRQLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA A KG ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|15893393|ref|NP_346742.1| porphobilinogen deaminase [Clostridium acetobutylicum ATCC 824]
gi|25453028|sp|Q97MU4|HEM3_CLOAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15022921|gb|AAK78082.1|AE007522_6 Hydroxymrthylbilane syntase (porphobilinogen deaminase)
[Clostridium acetobutylicum ATCC 824]
gi|325507505|gb|ADZ19141.1| porphobilinogen deaminase [Clostridium acetobutylicum EA 2018]
Length = 291
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 161/294 (54%), Gaps = 6/294 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LA + L D + I + + T GD+I +++L +IGGKGLF
Sbjct: 2 KLTIATRKSKLAQVQTELIINVLKDKYGISS---EKLLMETLGDKILDKSLADIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++IE+ L+ + D AVHS KD+P ++ +I+A R D+RDVF+S KDL
Sbjct: 59 IKDIERILLEDKADAAVHSMKDVPFEVPDMFEIAAVTLRVDVRDVFVSRDGTHFKDLKNG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGTSS RR A L R DI V+ RG ++TR+ K+ K I+LA AG+KRL E +
Sbjct: 119 AVIGTSSNRRAAQLKMLRDDIKVVPIRGNVQTRIRKMGEEKLDGIILAAAGLKRLNMENI 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++E+ P+ GQGA+ +E N ++L + ++++++ V ER+F+ L+G C
Sbjct: 179 ITDYFSVEEMIPAVGQGALGVEIKKENKN-RDLFRKLDNKNSRMCVEAERSFMRTLNGDC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A + G DG+ + +GN D +++G+ A+ I
Sbjct: 238 HSTIGAYAEIVNGQMNVLGFY-EIDGRRVKKD-VSGNIEDYMSLGKTLAEKILE 289
>gi|331085795|ref|ZP_08334878.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406718|gb|EGG86223.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 292
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 7/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGKG
Sbjct: 2 KRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + + ++
Sbjct: 60 LFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLVPAKGK--ENWN 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL E
Sbjct: 118 GQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LDG
Sbjct: 178 ERIERYFSPEEILPAAGQGILVVQGR---EEMRELVKKLQPEEMEVIAENERAFVRRLDG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S +A + + L G+ D + ++ + ++G + A +R
Sbjct: 235 GCSSPVAAYGRIEQDELVLTGLYYEEDTGNYVIATKRAEVRASAHLGWELADELR 289
>gi|327473567|gb|EGF18987.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK408]
Length = 306
Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+ RL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLNRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + ++L+ + E T V ER LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLKG--QDGQQLAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|119478980|ref|XP_001259519.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL
181]
gi|119407673|gb|EAW17622.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL
181]
Length = 341
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ F IGTR S LAL ++L P + I T GD+ T L E K
Sbjct: 15 SRRTFTIGTRKSKLALMQTDLVVAALKK--SWPEYTFQIHSQETAGDKNTVIALREFTTK 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---L 118
L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV +
Sbjct: 73 NLWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMAF 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
++ SV+GTSS+RR A L R + V D RG I TRL KL+ I+LA AG+
Sbjct: 133 SEMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIILAAAGL 192
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL E I + L+ ++ + GQGA+ +E ++ ++++ I H +T + ER
Sbjct: 193 LRLGLEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKLLRDMLSSIGHHETTMACLAER 252
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
+ L L+G C + + L IV++ DG+ EV +G+ A
Sbjct: 253 SLLRTLEGGCSAPLGVETEWVQDSDGSSKLRMRAIVVSVDGRESAEVEVDGSVDTSESAG 312
Query: 287 NIGRDAAQYIRFISNKNVF 305
G A+ + +
Sbjct: 313 EFGVTVAKALVEKGAGEIL 331
>gi|167561971|ref|ZP_02354887.1| porphobilinogen deaminase [Burkholderia oklahomensis EO147]
Length = 278
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 103/268 (38%), Positives = 156/268 (58%), Gaps = 2/268 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 SVVGTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+ +A A +G L+ G V +DG+
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGRR 278
>gi|324993558|gb|EGC25478.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK405]
gi|324995130|gb|EGC27042.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK678]
gi|327458927|gb|EGF05275.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1057]
gi|327461831|gb|EGF08162.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1]
Length = 306
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + ++L+ + E T V ER LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLKG--QDGQQLAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|116199079|ref|XP_001225351.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51]
gi|88178974|gb|EAQ86442.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51]
Length = 343
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 152/324 (46%), Gaps = 25/324 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++GTR S LAL ++L H P + ++T GDR + L E+G KGL+
Sbjct: 7 TIKMGTRRSALALRQTELVIAALQSAH--PHVTFEVHAMATAGDRDKSTPLPEMG-KGLW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-------AQS 117
T E+E KL++ ++D VHS KDMPT L +G + RED RDV I +
Sbjct: 64 TSELEAKLVARDVDVIVHSLKDMPTTLPEGCVLRCVPAREDPRDVVIFSKAREEAGRYKK 123
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
LKDL +V+GTSS+RR A L R + D RG IETRL K + AI+LA AG+
Sbjct: 124 LKDLPEGAVVGTSSVRRAAQLKRRYPGLVFRDVRGNIETRLRKCDEEGFDAIILAAAGLL 183
Query: 178 RLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
RL I + L+ + GQG + +E ++ + +EL+K I T + E
Sbjct: 184 RLDLGARIAQYLDSNTEGGGLLHAVGQGGLGLEVREDDEQMKELLKAIEDTPTMTACFAE 243
Query: 234 RAFLAELDGSCKSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRN---GNR 282
R+ + L+G C I K L +V++ DG E + +
Sbjct: 244 RSVMRTLEGGCSVPIGVETAWVEEEEAGEKKKKLQLRAVVVSLDGSQAVEGEKTQEVTSL 303
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
A +G++ AQ + + + +
Sbjct: 304 EQAEAMGKELAQELAGRGAQQILD 327
>gi|254455286|ref|ZP_05068715.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082288|gb|EDZ59714.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211]
Length = 305
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 177/301 (58%), Gaps = 1/301 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK IG+R S LAL +A + + ++ I +I+I ++TKGD++ + L+E+GG
Sbjct: 1 MNKK-ITIGSRGSKLALIYAQKAKDKIIQNTNIKDEDIIIKEITTKGDQVQDMRLSEVGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF+ IEK+L +ID AVH+ KDMP GL+ + +L R D R++ I+ + + L +
Sbjct: 60 KGLFSTNIEKELQDKKIDIAVHALKDMPAIETVGLRTNTFLKRNDPREILIAQSGKKLNE 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++S+IGTSS RR+ + + RSDI+ RG ++TR+ KLN+ AI+L+YAGIK L+
Sbjct: 120 LKINSIIGTSSYRREFQIKKIRSDINCKLIRGNVDTRIKKLNDGLYDAIILSYAGIKSLE 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I EI +IE+ PS GQG I ++ N+ + ++ IN ++T + ER L L
Sbjct: 180 IEDKITEIFSIEEIIPSAGQGIIALQCRNNDIEIISVLDEINDKETSSMAHAERNVLKVL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++AI A + + + + DGK ++ DA +G++ + ++ S
Sbjct: 240 EGDCETAIGTHAIIEEDKIILQAELFSLDGKQRFFEKKSSKINDARELGKELGEILKTKS 299
Query: 301 N 301
N
Sbjct: 300 N 300
>gi|145592923|ref|YP_001157220.1| porphobilinogen deaminase [Salinispora tropica CNB-440]
gi|145302260|gb|ABP52842.1| hydroxymethylbilane synthase [Salinispora tropica CNB-440]
Length = 322
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 11/308 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + +L P + ++ + T GDR + + ++G G+F
Sbjct: 4 PLRLGTRGSALAMAQSGQVAEALTAATGTP---VELVEVVTTGDR-STAPVHQLG-VGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L +G ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALAAGAIDFAVHSYKDLPTAAAPGLYVAAVPPRQDPRDALVATGGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKE 182
+ +GT +LRR A L + V RG + TRL ++ +A A++LA AG+ RL +
Sbjct: 119 ARVGTGALRRIAQLHALGLQLEVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLDRT 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L+
Sbjct: 179 DTITETLDPMLMLPAPAQGALAVECRSDDSALVELLAVLDHAPSRATVVAERALLATLEA 238
Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + +A +A G +Y G V++ DG +SR G DA+ IG+ A +
Sbjct: 239 GCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGKALATDLLD 298
Query: 299 ISNKNVFN 306
+ ++
Sbjct: 299 LGADSILG 306
>gi|254418576|ref|ZP_05032300.1| porphobilinogen deaminase [Brevundimonas sp. BAL3]
gi|196184753|gb|EDX79729.1| porphobilinogen deaminase [Brevundimonas sp. BAL3]
Length = 317
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 112/309 (36%), Positives = 165/309 (53%), Gaps = 8/309 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV----IIPLSTKGDRITNRTLTEIGG 60
P RIGTR S LALA + + ++ + I ++ + T GDRI +R L E+GG
Sbjct: 4 PLRIGTRRSKLALAQSGMMQRAIGRALGVAEAEIEAAVPLVEIVTTGDRIQDRRLMEMGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LFT+EIE+ L+ ID A+HS KD+P + +GL I+A RED RD FIS S
Sbjct: 64 KALFTKEIEEALLDRRIDIAIHSMKDVPAEQPEGLCIAAIPEREDARDAFISRDFDSFDQ 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR+A L R D+ V RG I+TRL + AILLA +G+ RL
Sbjct: 124 LPFGARLGTASLRRQAQALALRPDLKVEMLRGNIDTRLRRAAEGDFDAILLAVSGMTRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+E L+++ F P+PGQGA+ I+T ++ A V +NH +T +V ER + L
Sbjct: 184 VTEHIREKLSLDAFLPAPGQGALAIQTRADDIDA-PWVAALNHPETAVAVAAERGAMTAL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIR 297
+GSC++A+ +A +G TL +L+ DG DA +G +
Sbjct: 243 EGSCRTAVGAYALIEGDTLRLTTEMLSPDGSARWRRVGELFQPTEADARALGERLGGEVH 302
Query: 298 FISNKNVFN 306
+ +
Sbjct: 303 AFAGDQEVD 311
>gi|39940760|ref|XP_359917.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15]
gi|145010915|gb|EDJ95571.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15]
Length = 340
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 20/323 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR SPLA+ T + L H P + ++T+GD+ L +G K
Sbjct: 3 NSRVIKIGTRRSPLAIRQVEHTVALLQKAH--PDITFEVNAIATQGDKDKVSPLPSMG-K 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------ 115
G++T E+E L +GE+D VH KDMPT L ++ A + RED RDV +
Sbjct: 60 GMWTNELEAMLTTGEVDFIVHCLKDMPTTLPDNCELGAVMEREDPRDVVVIKPKHVQAGC 119
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+++ DL S++GTSS RR + L RW ++ D+RG I+TRL KL+ + + I+LA
Sbjct: 120 KTIADLPKGSLVGTSSPRRSSQLKRWYPELRFRDYRGNIDTRLRKLDAEDGEFDCIILAA 179
Query: 174 AGIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
AG+ R+ + I + L+ + GQGA+ +E + + ++++ + T +
Sbjct: 180 AGLHRMDQHSRIAQYLDSTTEGGGVLHAVGQGALGLEVRKGDIETLKVIECLVDMPTMKA 239
Query: 230 VNCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNR---CD 284
ER + L+G C I +G TL V+A DG + + + +
Sbjct: 240 GWAERTVMRTLEGGCSVPIGVETSWSDEGKTLRLRATVVALDGSEAVDADASASVSNQEE 299
Query: 285 AINIGRDAAQYIRFISNKNVFNF 307
A +G+ +Q + K + +
Sbjct: 300 AEALGKQVSQVLVERGAKKILDV 322
>gi|325696921|gb|EGD38808.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK160]
Length = 306
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQKLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + ++L+ + + T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDDKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA KG ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKKGQAYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|256425452|ref|YP_003126105.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588]
gi|256040360|gb|ACU63904.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588]
Length = 307
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +IGTR S LAL A + + L ++ V++P+ ++GD L EIG +G
Sbjct: 2 NREIKIGTRDSQLALWQANKVKGLLEAQ----GYSTVLVPIKSEGDIDLVTPLYEIGVQG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L++G ID AVHS KD+PT+L K + +A L R ++D+ + +
Sbjct: 58 IFTKSLDIALLNGRIDIAVHSLKDVPTQLPKNIIQAAVLERGPVKDLLVYRQDTAFLGQP 117
Query: 123 LH-SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ + I TSS+RRKA LR + + RG + TRL KL + A AG++R+
Sbjct: 118 EYIANIATSSVRRKAQWLRKYPKHQLHNLRGNVNTRLQKLAAENWDGAIFAAAGLERIGV 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ P+P QGA+ ++ ++ N T ER FL L
Sbjct: 178 --RPATSIELDWMLPAPAQGAVVAVCREDDDFCRQACAPFNDLATALCTRVERDFLRTLM 235
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + I+ +A T++F G + + DG+ ++ DA IGR AA+ I
Sbjct: 236 GGCTTPISAYATISNETVHFSGELCSLDGQQLFTITEQLPLQDAGVIGRSAAEKILAQGG 295
Query: 302 KNVF 305
+
Sbjct: 296 DKIV 299
>gi|207723608|ref|YP_002254006.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum MolK2]
gi|207742664|ref|YP_002259056.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum IPO1609]
gi|206588811|emb|CAQ35773.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum MolK2]
gi|206594058|emb|CAQ60985.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum IPO1609]
Length = 302
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 99/293 (33%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E+E L G
Sbjct: 1 MWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKELEVALAEGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P +L G + A L RED RD F+S+ L L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L + + RG ++TRL KL+ AI+LA AG+KRL + I+ ++ + P
Sbjct: 119 SLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERIRAVIASDVSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IET + Q + ++H T +V ERA L GSC+ +A FA+
Sbjct: 179 AAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQVPLAAFAHWTD 238
Query: 257 -STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305
L V + DG+ +A +G AQ + ++
Sbjct: 239 AGALRLRAFVASQDGRRKLAAEGEATPATLAEAEALGARVAQQMLDGGAWDIL 291
>gi|225677334|ref|ZP_03788309.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590620|gb|EEH11872.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 292
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 110/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 3 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L +
Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSGGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 121 IIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++ SC
Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIRVKSERSFMKTVNASCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + L+ ++ D K + R DA +G DA ++
Sbjct: 238 TPLAALAEYVSENMLHLRCMLA--DEKNIYFTERTSFIEDAEKMGMDAGLELKSK 290
>gi|153813574|ref|ZP_01966242.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174]
gi|149830319|gb|EDM85411.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174]
Length = 312
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 153/297 (51%), Gaps = 6/297 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K IG+R S LA+ + R + + H P ++ I+ + T GD+I +RTL ++GGK
Sbjct: 6 AKNKVIIGSRESRLAVLQSEMVRDYIKEQH--PGLDVEILTMKTTGDKILDRTLDKVGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E++K L+ G +VHS KDMP ++ + L + A+ RED RDV + L
Sbjct: 64 GLFVKELDKALLEGRTMLSVHSLKDMPMEVPEDLPLLAFSRREDPRDVLVLPEGA--ASL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+G SSLRR L D+ V RG ++TRL KL+ + ++LA AG+KRL
Sbjct: 122 DPLKPLGCSSLRRTLQLQTIYPDMKVKSIRGNLQTRLRKLDAGEYAGLILAAAGLKRLGL 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
EK I + ++ P+ GQG + ++ H E + ED W + ERAF+ LD
Sbjct: 182 EKRIHRYFSADEILPAAGQGILAVQGHKGLKY--EYLSGYKDEDAWIAGTAERAFVRYLD 239
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C S +A F +G L+ G+ + + S G + +A +G A+ ++
Sbjct: 240 GGCSSPVAAFGIVEGEELFLRGLYYREKDGRYFKDSIRGPKTEAARLGMCLAEQMKR 296
>gi|284992946|ref|YP_003411500.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160]
gi|284066191|gb|ADB77129.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160]
Length = 312
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 91/304 (29%), Positives = 152/304 (50%), Gaps = 8/304 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LA + ++ +P + ++ +ST+GDR ++ + ++GG G+F
Sbjct: 8 TLRLGTRASQLATTQSQAVADAITAASGVP---VELVHISTEGDR-SSVAIAQLGGTGVF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
I + L+ G +D AVHS KD+PT GL I+A PRED RD ++ +L +L
Sbjct: 64 VTAIRQALLEGTVDVAVHSYKDLPTLPEPGLTIAAVPPREDPRDALVARDGLTLGELPAG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT + RR A L + V+ RG ++TR+ ++ A++LA AG+ RL +
Sbjct: 124 ARVGTGAPRRVAQLRALGLGLEVVPIRGNVDTRMARVVPGDLDAVVLARAGLSRLGRLSA 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L+ P+P QGA+ +E N+ + ++L+ ++ T V ER LA L+ C
Sbjct: 184 VTETLDPLQVLPAPAQGALAVECRGNDERTRQLLAALDDAATRACVVAERTTLAALEAGC 243
Query: 245 KSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ +A +A G L+ V A DG S G +A +GR+ A +
Sbjct: 244 SAPVAAYAEVAEGEDGPELFLRASVTALDGSDGVRGSITGPPPEAERLGRELAAELLDRG 303
Query: 301 NKNV 304
+
Sbjct: 304 AAEL 307
>gi|325661929|ref|ZP_08150549.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471781|gb|EGC74999.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 292
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 7/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGKG
Sbjct: 2 KRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + + ++
Sbjct: 60 LFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLVPAKGK--ENWN 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL E
Sbjct: 118 GQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LDG
Sbjct: 178 ERIERYFSPEEILPAAGQGILVVQGR---EEMRELVKELQPEEMEVIAENERAFVRRLDG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S +A + + L G+ D + ++ + ++G + A +R
Sbjct: 235 GCSSPVAAYGRIQQDELVLTGLYYEEDTGNYVIATKRAEVRASAHLGWELADELR 289
>gi|296532729|ref|ZP_06895413.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
gi|296266947|gb|EFH12888.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 112/313 (35%), Positives = 158/313 (50%), Gaps = 14/313 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIGG 60
P R+GTR SPLAL + +H P ++T GDRI ++ L +IGG
Sbjct: 56 PLRVGTRGSPLALWQTRTFLELV--LHFCPVLRNAKAFEEHVIATSGDRIQDKRLADIGG 113
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF-------ISH 113
KGLF +EI + L+ G ID AVHS KD+ T+L G+ ++ L RED RD +
Sbjct: 114 KGLFAKEIHEALLDGRIDFAVHSLKDLETELPPGIVLACTLRREDARDTLVLGPGAADAD 173
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
A + + IGT+SLRR+A LL R D+ V RG + +RL KL + LLA
Sbjct: 174 PADPFSAIPAGARIGTASLRRQAQLLHARPDLKVEMIRGNVGSRLAKLAGGECDGTLLAL 233
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+KRL E +L+ E P+ GQG + + + + EL+ I E
Sbjct: 234 AGLKRLGLESHASVVLDAEAMVPAAGQGIVGVTVRAADTELHELLSGIEDRTARAVSRAE 293
Query: 234 RAFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
RA LA LDGSC++ I G A G L+ G+V DG + S +G +A IGR+
Sbjct: 294 RALLAALDGSCRTPIGGHARLLPGGELHLTGLVARPDGSFLLKRSLHGAAGEAERIGREL 353
Query: 293 AQYIRFISNKNVF 305
+ +R S ++F
Sbjct: 354 GESLRADSPADIF 366
>gi|49388603|dbj|BAD25718.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group]
gi|215686353|dbj|BAG87614.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717107|dbj|BAG95470.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 106/260 (40%), Positives = 157/260 (60%), Gaps = 3/260 (1%)
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
I ++ L +IGGKGLFT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD
Sbjct: 2 ILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDA 61
Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169
FI TA SL +L SV+G++SLRR++ +L + V++FRG ++TRL KL HA
Sbjct: 62 FICLTASSLAELPAGSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHAT 121
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
LLA AG+KRL + +L++++ P+ QGAI I ++ + +NHEDT +
Sbjct: 122 LLALAGLKRLNMAETATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLA 181
Query: 230 VNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-D-AI 286
V CER FL+ LDG+C++ IA +A K F G++ + DG +E SR G D +
Sbjct: 182 VACEREFLSVLDGNCRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMV 241
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+G+DA ++ + F+
Sbjct: 242 EMGKDAGHELKAKAGPGFFD 261
>gi|332363288|gb|EGJ41073.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK49]
Length = 306
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAITQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISRREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 KGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|149174132|ref|ZP_01852760.1| porphobilinogen deaminase [Planctomyces maris DSM 8797]
gi|148847112|gb|EDL61447.1| porphobilinogen deaminase [Planctomyces maris DSM 8797]
Length = 318
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 7/305 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
EK+P RI TR S LAL A+ L + I I+ ++++GDR L+E GG
Sbjct: 6 EKRPLRIATRASNLALWQAYYVSDLLKK--QSSERPIEIVHITSEGDRDLTSPLSEFGGL 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QS 117
G+FT E++K ++ G D AVHS KD+PT+ GLQ++ R + DV I +
Sbjct: 64 GVFTREVQKAVLDGRADLAVHSLKDLPTEQAPGLQLAGIPERGPLYDVLIFPQGSEAVEH 123
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ DLA + IGT SLRR+A LL RSD+ +++ RG +ETRL KL+ + A+ LA AG+
Sbjct: 124 ITDLADDARIGTGSLRRRAQLLHQRSDLQMLEVRGNVETRLKKLDAGEYDALCLAEAGMV 183
Query: 178 RLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL+ E+ +L + P+ GQGA+ IE ++ + L+ ++ T + ER+
Sbjct: 184 RLELLEQRASLLLQPPEVYPAVGQGALGIECRADDEETAALLAGLSDPPTQAATTAERSL 243
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
LA L C + I + L +VL++DG S G+ +A +IG A+ +
Sbjct: 244 LAHLRAGCHAPIGSLSQTTVDQLTLEAVVLSADGVERICASVTGSLTEAADIGVKVAKAL 303
Query: 297 RFISN 301
Sbjct: 304 LADGA 308
>gi|322435837|ref|YP_004218049.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9]
gi|321163564|gb|ADW69269.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9]
Length = 318
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 100/320 (31%), Positives = 162/320 (50%), Gaps = 21/320 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN---RTLTE 57
M + RIG+R S LAL A + L H + I + T GDR+
Sbjct: 1 MTQ--IRIGSRGSQLALWQANHIAAELRAH----GHQVEIEVIRTTGDRMQQPGFVPPPG 54
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
+ GKG+F +EIE L+ G ID AVHS KD+PT + I+A PR D RD F+ +
Sbjct: 55 LDGKGIFIKEIEDALLDGRIDLAVHSYKDLPTTIDPRFTIAAVPPRADARDAFVCEPYWA 114
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L IGT+S RR+A LL R D++ ++ RG I+TRL KL A++LA AG+
Sbjct: 115 LHTLPHAGRIGTTSPRRRAQLLALRPDLTFVELRGNIDTRLRKLEEGACDALVLACAGLD 174
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHV-----------NNPKAQELVKVINHEDT 226
R+ + + + + ++++ P+PGQGA+ +ET +P + ++ + H +T
Sbjct: 175 RIARTESVHQRFDVDELTPAPGQGALALETRSPAHALDTEDPTRDPAIYKAIRALEHPET 234
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-A 285
+ + ERAFLAE+ G C+ + Y VL+ DG+ + + + + + A
Sbjct: 235 RFATDAERAFLAEMGGGCELPLGAHCLSTSGVYRLYAQVLSPDGEYMVQTTLDRHPEEPA 294
Query: 286 INIGRDAAQYIRFISNKNVF 305
+G+ AA+ ++ ++
Sbjct: 295 AALGQRAAEILKAQGALDLL 314
>gi|329114337|ref|ZP_08243099.1| Porphobilinogen deaminase [Acetobacter pomorum DM001]
gi|326696413|gb|EGE48092.1| Porphobilinogen deaminase [Acetobacter pomorum DM001]
Length = 406
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 111/320 (34%), Positives = 165/320 (51%), Gaps = 21/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----NIVIIPLSTKGDRITNRTLTEIG 59
P R+GTR SPLAL R+ L + + P ++T GD++ NR L EIG
Sbjct: 88 PLRVGTRGSPLALVQT---RAFLTTLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIG 144
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I +
Sbjct: 145 GKGLFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLAQS 204
Query: 120 D-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172
D L +++G +S+RR+A +L R D+ RG ++TRL+KL ++ A LLA
Sbjct: 205 DPDDPYSALPEGALVGCASVRRQAQMLHVRPDLQFGLLRGNVQTRLDKLAAHQCQATLLA 264
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+KRL + +L+ P+ GQG + + ++ + +EL+ I +
Sbjct: 265 LAGLKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDVELRELLSAIEDYEARAVATA 324
Query: 233 ERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
ER+ LAELDGSC++ I G+A K L+ G+V DG + S G DA
Sbjct: 325 ERSLLAELDGSCRTPIGGYAQLLPAEEGKDPKLHLTGLVAREDGSFLLKRSITGMPEDAA 384
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+G++ + +R S ++F
Sbjct: 385 RLGKELGESLRKDSPSDIFE 404
>gi|171692929|ref|XP_001911389.1| hypothetical protein [Podospora anserina S mat+]
gi|170946413|emb|CAP73214.1| unnamed protein product [Podospora anserina S mat+]
Length = 341
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 106/323 (32%), Positives = 155/323 (47%), Gaps = 20/323 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+ +IGTR S LALA ++L P + ++T GDR L +G K
Sbjct: 3 EEYTVKIGTRRSALALAQTDLVIAALSKAAG-PSVKFEVHSMATMGDRDKTTPLPSLG-K 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-----AQ 116
GL+T E+E KL++ E+D VHS KDMPT L +G + A RED RDV + +
Sbjct: 61 GLWTSELEAKLVNKEVDVIVHSLKDMPTSLPEGCVLGAVTQREDARDVVVFPRRQGGEYK 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174
+LKDL SV+GTSS+RR A L R + D RG I+TRL K ++ AI+LA A
Sbjct: 121 ALKDLPEGSVVGTSSVRRAAQLKRSYKGLVFRDVRGNIDTRLAKCDDENGGYDAIILAAA 180
Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ RL ++ I + L + GQGA+ +E + K EL+K EDT +
Sbjct: 181 GLLRLGYDERIGQYLESSTEGGGLLHAVGQGALGLEIREGDEKIAELIKAAVDEDTMMAA 240
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGST----LYFYGIVLASDGKIFHEVSRN---GNRC 283
ER+ + L+G C I L V++ DGK + R N
Sbjct: 241 FAERSVMRTLEGGCSVPIGVETKWVEDEGEKKLRLKVAVVSLDGKKAVDGERTEKIANLE 300
Query: 284 DAINIGRDAAQYIRFISNKNVFN 306
+A +G+ A+ + + + +
Sbjct: 301 EAEALGKSLAEKLAREGAQEILD 323
>gi|315638143|ref|ZP_07893325.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21]
gi|315481679|gb|EFU72301.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21]
Length = 308
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLAL + L H + + STKGD + + L +IGGKGL
Sbjct: 2 KKLIIATRKSPLALWQSEFVADILRKTHH---IEVDLEGFSTKGDILLDSPLAKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L
Sbjct: 59 FTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALPQ 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + + AI+LA AG+KRL E
Sbjct: 119 NAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKDGEFDAIILASAGVKRLGLES 178
Query: 184 VIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K + ++ P+ QG + I++ N + L++ +N E + ER F+ L+
Sbjct: 179 EVKFIYRFSKDELVPAATQGILGIQS-PNKSEILTLLQCLNDEKSLIESTVERDFIRTLE 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A G + I+ DG R + + G A
Sbjct: 238 GGCQVPIGINAELIGEQITVRSILGLPDGSEILRDKRIILKKNYQGFGERLALEFIKRGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELL 301
>gi|221126431|ref|XP_002156062.1| PREDICTED: similar to hydroxymethylbilane synthase, partial [Hydra
magnipapillata]
Length = 418
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 100/339 (29%), Positives = 156/339 (46%), Gaps = 37/339 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
EK +G+R S LA+ ++L K +I + T GD+I + L +IG K
Sbjct: 27 EKTSVVVGSRKSQLAVIQTKSIVAALCQKEK--DVECIIETMDTLGDKILHIALPKIGEK 84
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
LFT+++E L +D VHS KD+PT L +G+ IS R+D RD I H + L
Sbjct: 85 SLFTKDLELALSEKRVDFLVHSLKDLPTTLPQGMAISTIYKRDDPRDCIIFHPKHNGKKL 144
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177
DL +S+IGTSSLRR A L R + ++ RG + TRL KL AI+LA AG+
Sbjct: 145 ADLPENSIIGTSSLRRVAQLKRKYNKLTFQSVRGNLNTRLQKLEEESLYDAIVLAKAGVD 204
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + I +IL+ ++ + GQGAI +E ++ ++ + +T + ER F+
Sbjct: 205 RMGWTEKIGQILSEDECLYAIGQGAITVEVRNDDKYTISILAQLTDMETLLACVAERCFM 264
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-------------- 283
L+G C + IA + G+ GIVL +DG F + + +
Sbjct: 265 RTLNGGCSTPIACHSQFSGNNYSLRGIVLNADGSRFLDSTVSTTLQVNILTDQNEPPSYT 324
Query: 284 -----------------DAINIGRDAAQYIRFISNKNVF 305
A G + A ++ + +V
Sbjct: 325 VSKSGVVINSLYINEFIKAEKCGEELAYCLKKLGADDVL 363
>gi|167580196|ref|ZP_02373070.1| porphobilinogen deaminase [Burkholderia thailandensis TXDOH]
Length = 286
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 102/275 (37%), Positives = 153/275 (55%), Gaps = 2/275 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L G+C
Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHPTALAVEAERAVSRALGGNC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
+ +A A +G L+ G V +DG
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGARVLAAHAQ 285
>gi|289642295|ref|ZP_06474444.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata]
gi|289507930|gb|EFD28880.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata]
Length = 313
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 104/308 (33%), Positives = 160/308 (51%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIGTR SP+ALA A R+ L ++ P I+P++T GDR T L+ +GGK
Sbjct: 5 ASRLIRIGTRSSPMALAQAERVRAELTALN--PDLTAEIVPITTSGDRWTG-PLSTLGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLK 119
G FT+E+++ L++G D AVH KD+P + G +AYLPR+DIRD I ++L
Sbjct: 62 GAFTKEVDEALLAGRADLAVHCMKDVPGDRPVPAGTVFAAYLPRDDIRDALIHPGGRTLD 121
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTS++RR A L + + + RG TRL +L++ A A+LLA +G++R+
Sbjct: 122 QLPAGTRVGTSAVRRIAQLAQSHPHLETVPIRGNANTRLARLDDGAADALLLAVSGLERI 181
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I EIL+ E P G G + ++ ++ +LV ++ D V ER L
Sbjct: 182 GQAGRITEILSAETMCPPIGAGVLGLQCREDDTDTAQLVAGMDDIDARRQVTAERMLLHV 241
Query: 240 LDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C S IAG A+ + L V + DGK + G D +G A +
Sbjct: 242 LQGHCNSPIAGHAHTEPDGRLSLRAKVFSPDGKTVLDAHEWGPGTDPTTLGASVAVALLR 301
Query: 299 ISNKNVFN 306
+++ N
Sbjct: 302 QGAQDLLN 309
>gi|114797250|ref|YP_761901.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444]
gi|123128354|sp|Q0BX92|HEM3_HYPNA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114737424|gb|ABI75549.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444]
Length = 321
Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 7/306 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+GTR SPLALA A + + ++ I+ +T GD++T L GGKGL
Sbjct: 11 KRLRLGTRGSPLALAQAHQIADGIRAA-SAGAYDCEIVAFTTTGDKLTTERLINSGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L GE+D AVHS KD+P+ L G +A+ RED RD F+SH A+S++DL
Sbjct: 70 FTRELDDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPE 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR+A L R D+ V+ FRG + TR+ KL A A LA AG+ RL +
Sbjct: 130 GATLGTASLRREAQALALRPDLKVVTFRGNVATRMRKLEEGLADATFLAMAGLTRLGLSE 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + +ED P+ GQG I + T + + + E++ ++HE + + ERAFL +LDG
Sbjct: 190 VAT-PIPLEDMLPAAGQGIIGVVTRDDVDTELLEILGQLSHEPSRVAAIAERAFLEKLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV----SRNGNRCDAINIGRDAAQYIRF 298
SC++ IA + +G G VL+ G ++ + +GR AQ I F
Sbjct: 249 SCRTPIAAHLFDRGDEWQLIGEVLSPGGTTRWRGDGVCRKDATDAQLVLLGRAVAQEIIF 308
Query: 299 ISNKNV 304
+ + +
Sbjct: 309 AAKEAL 314
>gi|302511047|ref|XP_003017475.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS
112371]
gi|291181046|gb|EFE36830.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS
112371]
Length = 331
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 98/321 (30%), Positives = 151/321 (47%), Gaps = 18/321 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
L L+G C + + G L IV + DGK E+ ++ A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVPNASGNGEMLRLRCIVTSIDGKEAVEIEKDCHVQAPEQAE 302
Query: 287 NIGRDAAQYIRFISNKNVFNF 307
G+ A + +
Sbjct: 303 EFGKAVADEMVEKGAGKILEV 323
>gi|327489115|gb|EGF20910.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1058]
Length = 306
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFLQAGQTLANLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA A KG ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|167044207|gb|ABZ08888.1| putative Porphobilinogen deaminase, dipyromethane cofactor binding
domain protein [uncultured marine microorganism
HF4000_APKG5H11]
Length = 322
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 98/300 (32%), Positives = 148/300 (49%), Gaps = 3/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LAL + L P + + T+GD L +G G+F
Sbjct: 18 IKVGSRGSTLALIQDHVVINRLKA--NSPALEFEVDTVRTRGDVDQTSRLAGMG-LGIFV 74
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E++L+ G++D AVHS KDMPT+L GL + A L RED RDV ++ L L +
Sbjct: 75 KELEQELLDGKLDIAVHSLKDMPTQLADGLVLGAVLSREDPRDVLVNRYGCPLDGLPKGA 134
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L ++ + V+ RG +ETRL K +A +LA AG+ RL + I
Sbjct: 135 KIGTSSPRRAAQLKQYAPQVEVVSIRGNVETRLRKAQGEEADGAILAAAGMIRLGLQDQI 194
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ F P PGQG + +E ++ + EL+ I+ DT ER FLA L G C
Sbjct: 195 AEYLSATQFVPPPGQGILAVEARADDFRMLELLSAIDDADTRYEATAERGFLARLGGGCS 254
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A C G + + +DG+ G + D + + DA + ++
Sbjct: 255 IPVGAYARCNGDNIVMTIYMSTADGEKKFSAKIQGLKRDPLQLANDAYLALVERGGADLV 314
>gi|312141093|ref|YP_004008429.1| hydroxymethylbilane synthase hemc [Rhodococcus equi 103S]
gi|325674097|ref|ZP_08153787.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707]
gi|311890432|emb|CBH49750.1| hydroxymethylbilane synthase HemC [Rhodococcus equi 103S]
gi|325555362|gb|EGD25034.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707]
Length = 334
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 99/311 (31%), Positives = 152/311 (48%), Gaps = 15/311 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LA A R +L+ H ++ + TKGD +T + IG G
Sbjct: 19 SRTLRIGTRGSLLATTQAGHVRDALIAA----GHPAELVIIKTKGD-VTAGPVQRIG-VG 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F E+ + L++GE+D AVHS KD+PT L I+A RED RD ++ L +L
Sbjct: 73 VFVAELREALVAGEVDVAVHSYKDLPTAQPDDLTIAAVPTREDPRDALVARDGLVLGELP 132
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S IGTS+ RR+A L + + RG I+TRL K+ + + AI++A AG+ R+ +
Sbjct: 133 PGSRIGTSAPRRRAQLRAMGLGLEIEPLRGNIDTRLGKVASGELDAIVIARAGLSRIGRT 192
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E L P+P QGA+ +E +NP ++ ++ T +V ERA LAEL+
Sbjct: 193 ERITETLEPVQMLPAPSQGALAVECRSDNPDLIAILGELDDHATRAAVVAERALLAELEA 252
Query: 243 SCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + + A L G A DG S G+ A +GR A
Sbjct: 253 GCTAPVGAIAEVVESLDDDGRVFEELSIRGCAAAIDGSDVIRASLVGSPERADELGRAVA 312
Query: 294 QYIRFISNKNV 304
+ + + +++
Sbjct: 313 RELLDLGARDL 323
>gi|168178318|ref|ZP_02612982.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916]
gi|182670871|gb|EDT82845.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSNLAQVQTEIIIDLLNKKH---DIKCEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK ++L K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEIMEEHPK-KDLFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 289
>gi|297201478|ref|ZP_06918875.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
gi|197716811|gb|EDY60845.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
Length = 319
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 156/317 (49%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K R+GTR S LALA + ++ V P + ++ ++T GD ++ L +IGG
Sbjct: 1 MSTKALRLGTRRSKLALAQSGRVAEAVSQVTGRP---VELVEITTYGD-VSKEALAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A D
Sbjct: 57 TGVFVTALREALLKGEVDFAVHSLKDLPTGQPDELVLAALPEREDPRDVIVARDALKFTD 116
Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L DI + RG I+TR+ + + + A++LA AG+
Sbjct: 117 LPPGARIGTGSPRRTAQLNAYARAHGLDIETVAIRGNIDTRMRFVRDGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+R+ + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+
Sbjct: 177 QRIGRIDEVTDFLSVDTVLPAPGQGALAIECTADNADLIAALGELDDPFTRVAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A + G+V +DG ++S G A+
Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSRMVQLSTTGPVPETYDQAMA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+GR+ A + +
Sbjct: 297 LGRELAAEMLAQGAAGL 313
>gi|311744366|ref|ZP_07718168.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272]
gi|311312332|gb|EFQ82247.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272]
Length = 311
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 89/303 (29%), Positives = 152/303 (50%), Gaps = 8/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + + +V + ++ +ST+GDR T L E+GG+G+F
Sbjct: 8 LRLGTRASVLARTQSGHVADRITEVS---GRAVELVTISTEGDRSTG-PLAEMGGQGVFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +G +D AVHS KD+PT L ++A PRED+RDV ++ +L +L +
Sbjct: 64 AALREAVAAGHVDLAVHSLKDLPTAPDPRLALAAVPPREDVRDVVVARDGLTLGELPQGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT S RR+A + + ++ RG ++TR+ K+ + + A++LA AG+ RL +
Sbjct: 124 RIGTGSPRREAQINALGLGVEIVPIRGNVDTRIGKVASGEVDAVVLARAGLLRLGRADEA 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ P+PGQGA+ +E + + L+ ++ DT +V ER+ LA L+ C
Sbjct: 184 TEVLDPIQVLPAPGQGALAVECRAGDDELIGLLAALDDADTRAAVTAERSLLAALEAGCS 243
Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ + A G L+ +V G +S G +A +G A +
Sbjct: 244 APVGALAEVAWGDDGDELWIRAVVADPSGSPTIRLSATGLPAEAAAVGERLAAEMLADGA 303
Query: 302 KNV 304
+
Sbjct: 304 DRI 306
>gi|291452105|ref|ZP_06591495.1| porphobilinogen deaminase 1 [Streptomyces albus J1074]
gi|291355054|gb|EFE81956.1| porphobilinogen deaminase 1 [Streptomyces albus J1074]
Length = 323
Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 21/321 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ + P + ++ ++T GD + L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVHQLTGRP---VELVEITTYGDT-SREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT L ++A PRED RDV I+ ++
Sbjct: 57 TGVFVAALREALVRGEVDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFEE 116
Query: 121 LALHSVIGTSSLRRKALLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L + R + + RG I+TR+ + + + A++LA AG+
Sbjct: 117 LPEGARVGTGSPRRMAQLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNC 232
R+ + + E L+++ P+PGQGA+ IE + ++ ++ T +V
Sbjct: 177 HRVGRSDEVTEYLSVDTILPAPGQGALAIECAAGHEADGLPLAAVLAELDDPATRAAVTA 236
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----C 283
ER+ LA L+ C + + A + G+V + DG ++S G
Sbjct: 237 ERSLLAALEAGCSAPVGALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTGPVPTTHD 296
Query: 284 DAINIGRDAAQYIRFISNKNV 304
+A +G + A + +
Sbjct: 297 EAAALGTELAAEMLAKGAAGL 317
>gi|58585034|ref|YP_198607.1| porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419350|gb|AAW71365.1| Porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 292
Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats.
Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+A A E + L+D+ ++ II + T GD+ N L EIGGKGLF
Sbjct: 3 IRIGTRGSSLAIAQALEAKQKLLDL--FSSLSVEIIKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +LI ID AVHS KD+P K L I L R D FIS+ +SLK L +
Sbjct: 61 KEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+I TSS+RRK LL +R D++++ RG + TR L N I+LA AG+ RLKK+ +I
Sbjct: 121 IIATSSIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLKKDYLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 178 TEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCF 237
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A Y + L+ Y ++ D K + R DA +G DA ++
Sbjct: 238 TPLAALAKYVSENVLHLYCMLA--DKKNIYFTERTSFVEDAEKMGMDAGLELKSK 290
>gi|302381524|ref|YP_003817347.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264]
gi|302192152|gb|ADK99723.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264]
Length = 315
Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats.
Identities = 106/310 (34%), Positives = 162/310 (52%), Gaps = 12/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LALA + + ++ ++P +V++ + T GD+I +R L E+GGK LF
Sbjct: 3 TIRIGTRRSALALAQSGMMQRAIAAAMQLPIEEVVLVEIVTTGDQIQDRRLMEVGGKALF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE+ L+ G +D AVHS KD+P + GL I+A RED RD FIS L+ L
Sbjct: 63 TKEIEEALLDGRVDIAVHSMKDVPAEQPPGLTIAAIPEREDARDAFISRDFDELEHLPHG 122
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GT+SLRR+A L R D+ + RG I+TRL + AILLA +G+ RL +
Sbjct: 123 GRLGTASLRRQAQALALRPDLQIEMLRGNIDTRLRRAAEGDFDAILLAASGLNRLGRSDA 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ L+++ F P+PGQGA+ ++T + V+ +NH T V ER + L+GSC
Sbjct: 183 VRGFLSVDAFLPAPGQGALALQTREGDTD-HAWVQAMNHGPTALCVAAERGAMVALEGSC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR-----------CDAINIGRDAA 293
++A+ A+ G L +LA DG + +A ++G
Sbjct: 242 RTAVGAHAHIDGDRLTLTTEMLAPDGTARWRRAGEITLITAPDAPGRAMDNARDLGLRLG 301
Query: 294 QYIRFISNKN 303
+ +
Sbjct: 302 HEVHAAAGDQ 311
>gi|271962120|ref|YP_003336316.1| hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021]
gi|270505295|gb|ACZ83573.1| Hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021]
Length = 306
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 6/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S +A + + L ++ + ++ ++T GD +T LT++GG G+F
Sbjct: 7 PLRLGTRRSLMATTQSGLVAARLTELT---GRAVELVGVTTFGD-VTKANLTQLGGTGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ KLI GEID AVHS KD+PT + I+A PR+D RD +S L DL
Sbjct: 63 VSALRDKLIDGEIDFAVHSLKDLPTTQDPRVVIAAIPPRDDPRDALVST--AKLADLPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GT S RR A L R D+ + RG +TR+ K+ + + ++LA AG+ RL +E
Sbjct: 121 SKVGTGSPRRIAQLRVLRPDLEYVPIRGNADTRIGKVTSGELQGVVLAAAGLGRLGREAE 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++ +E+ P+PGQGA+ +E + E + V++ T +V ERA L L+ C
Sbjct: 181 ISQVFEVEEMLPAPGQGALAVECRADRTDLIEFLSVLDDARTRAAVTAERAVLNALEAGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + ++ G L V+A DGK S G +++GRD A + +
Sbjct: 241 AAPVGAYSADDGQNLILTAAVVAVDGKRAVRKSTAGTLSAPMDLGRDLAAEMIAEGAGTL 300
Query: 305 FN 306
Sbjct: 301 IG 302
>gi|168182770|ref|ZP_02617434.1| hydroxymethylbilane synthase [Clostridium botulinum Bf]
gi|237794217|ref|YP_002861769.1| porphobilinogen deaminase [Clostridium botulinum Ba4 str. 657]
gi|259647792|sp|C3L2Z3|HEM3_CLOB6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|182673912|gb|EDT85873.1| hydroxymethylbilane synthase [Clostridium botulinum Bf]
gi|229263906|gb|ACQ54939.1| hydroxymethylbilane synthase [Clostridium botulinum Ba4 str. 657]
Length = 290
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L RSD+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRSDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 289
>gi|285019346|ref|YP_003377057.1| hydroxymethylbilane synthase [Xanthomonas albilineans GPE PC73]
gi|283474564|emb|CBA17065.1| probable hydroxymethylbilane synthase protein [Xanthomonas
albilineans]
Length = 302
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 112/287 (39%), Positives = 159/287 (55%), Gaps = 2/287 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RI TR SPLAL + + L H P ++++P+ST+GD + +R+L IGGKGL
Sbjct: 2 KILRIATRKSPLALWQSEYVAACLRRAH--PQLEVLLVPMSTRGDEVLDRSLAAIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ G+ DCAVHS KD+P +L + +SA LPR D D IS+ +L L L
Sbjct: 60 FLKELELAMLRGDADCAVHSLKDVPMELERPFVLSAILPRADSADALISNLYAALDALPL 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL E+
Sbjct: 120 GARVGTSSLRRQAQLRARRPDLQLLDLRGNVNTRLAKLDNGDYDAIVLACAGLQRLGLER 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + L D+ P+P QGAI +E + A L V++ T V ERA L GS
Sbjct: 180 RITQRLQAPDWLPAPAQGAIAVECRQDMAAACALFAVLDDVATRTCVEAERAMNRALHGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
C +A FA +G L G+V + D +G+
Sbjct: 240 CHVPVAAFAQWRGEDLLLQGLVGDVADGRLVRAQIQRSAQDPQALGQ 286
>gi|238563412|ref|ZP_00438929.2| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4]
gi|238520765|gb|EEP84222.1| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4]
Length = 393
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 77 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 134
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 135 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 194
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 195 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 254
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 255 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 314
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 315 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 374
Query: 302 KNVFN 306
+ + +
Sbjct: 375 RAIVD 379
>gi|169779115|ref|XP_001824022.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83772761|dbj|BAE62889.1| unnamed protein product [Aspergillus oryzae]
Length = 342
Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 155/320 (48%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F +GTR S LAL+ S+L V+ P + I T GD T E K
Sbjct: 16 SRKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTK 73
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + SL
Sbjct: 74 NLWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSL 133
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
DL SV+GTSS+RR A L + VID RG I TRL KL+ I+LA AG+
Sbjct: 134 SDLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGL 193
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER
Sbjct: 194 LRLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAER 253
Query: 235 AFLAELDGSCKSAIAGFAYC----KGS-TLYFYGIVLASDGKIFHEVSRNGNRCD---AI 286
+ L L+G C + + GS L IV++ DGK EV +G+ A
Sbjct: 254 SLLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGSVDSVQAAE 313
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+ G A+ + + +
Sbjct: 314 DFGVTVAKELVTKGAEKILE 333
>gi|57242140|ref|ZP_00370080.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195]
gi|57017332|gb|EAL54113.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195]
Length = 308
Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 6/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLAL + L H + + STKGD + + L +IGGKGL
Sbjct: 2 KKLIIATRKSPLALWQSEFVADILRKTH---GIEVHLEGFSTKGDILLDSPLAKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L
Sbjct: 59 FTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALPQ 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + AI+LA AG+KRL E
Sbjct: 119 NAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKGGEFDAIILASAGVKRLGLES 178
Query: 184 VIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K + ++ P+ QG + I++ + + L++ +N E + ER F+ L+
Sbjct: 179 EVKFIYRFSKDELVPAATQGILGIQS-PDKNEILTLLQCLNDEKSLIESTVERDFIRTLE 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A G + I+ DG R + + G A
Sbjct: 238 GGCQVPIGINAELMGEQITVRSILGLPDGSEILRDKRIILKKNYQGFGERLALEFIKRGA 297
Query: 302 KNVF 305
K +
Sbjct: 298 KELL 301
>gi|238061239|ref|ZP_04605948.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149]
gi|237883050|gb|EEP71878.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149]
Length = 322
Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats.
Identities = 100/308 (32%), Positives = 163/308 (52%), Gaps = 11/308 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + ++L + ++ + T GDR ++ + +G G+F
Sbjct: 4 PLRLGTRGSALAIAQSGQVAAALTAAT---GREVELVEVVTAGDR-SSAPVHRLG-VGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L++ ID AVHS KD+PT GL I+A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALVARTIDLAVHSYKDLPTAAASGLHIAAVPPRQDPRDALVAKGGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182
+V+GT +LRR A L + V RG ++TRL ++ + A++LA AG+ RL +
Sbjct: 119 AVVGTGALRRIAQLHALGLQLEVTPIRGNVDTRLARVLGPDADLDAVVLARAGLARLGRT 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+P QGA+ +E ++P EL+ V++H + +V ERA LA L+
Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDPDLVELLAVLDHAPSRAAVTAERALLATLEA 238
Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + +A +A G +Y G V++SDG +SR G DA IG+ A +
Sbjct: 239 GCSAPVAAYAELAEGDVGDEIYLRGAVISSDGTRDLRLSRTGTPADAAEIGKALAAELLE 298
Query: 299 ISNKNVFN 306
+ ++
Sbjct: 299 LGADSILG 306
>gi|326472408|gb|EGD96417.1| porphobilinogen deaminase [Trichophyton tonsurans CBS 112818]
gi|326481632|gb|EGE05642.1| porphobilinogen deaminase [Trichophyton equinum CBS 127.97]
Length = 331
Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 153/321 (47%), Gaps = 18/321 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKRGQPKTTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
L L+G C + + KG L IV + DGK E+ ++ N A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCNVQTPEQAE 302
Query: 287 NIGRDAAQYIRFISNKNVFNF 307
G+ A + +
Sbjct: 303 AFGKAVADEMVEKGAGKILEV 323
>gi|302662015|ref|XP_003022667.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum
HKI 0517]
gi|291186626|gb|EFE42049.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum
HKI 0517]
Length = 331
Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats.
Identities = 98/321 (30%), Positives = 151/321 (47%), Gaps = 18/321 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
L L+G C + + G L IV + DGK E+ ++ A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGNGEMLRLRCIVTSIDGKEAVEIEKDCHVQAPEQAE 302
Query: 287 NIGRDAAQYIRFISNKNVFNF 307
G+ A + +
Sbjct: 303 EFGKAVADEMVEKGAGKILEV 323
>gi|158520980|ref|YP_001528850.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3]
gi|226740631|sp|A8ZWG5|HEM3_DESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158509806|gb|ABW66773.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3]
Length = 310
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 156/303 (51%), Gaps = 7/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ L I+P+ T+GD++ N + +IG KG+FT
Sbjct: 3 IRIGSRKSSLAMWQTCYVEDKLKQS----GITTSILPIDTRGDQVLNVAIAKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124
EE+E KL G+ID AVHSAKDMP+ L G ++ A+ RE+ DV +SH + D +
Sbjct: 59 EELEAKLADGDIDIAVHSAKDMPSVLPDGFELIAFTDREEPADVLVSHKKDLDISDSSRP 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RR+ALL R+ + +D RG ++TR+ K+ AIL+AYAGI R+ + +
Sbjct: 119 VTIGTSSVRRQALLGRFYPHVRTVDIRGNVQTRVLKMKEGLCDAILMAYAGIHRMGMDDL 178
Query: 185 IKEILNIEDFPPSPGQGAICIET--HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + + F P GQG I +E + K + + INH + + ERAFL L+G
Sbjct: 179 IVHTFSPDTFIPPVGQGCIAVEASSRLAAEKKEAIRACINHPASETCLLAERAFLKRLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C A G L G +++ DGK F +R G A IG D ++
Sbjct: 239 GCSIPAFALARLNGDRLTLSGGLMSLDGKKFIFNTRAGAGSQATAIGTDLGNHVLENGGA 298
Query: 303 NVF 305
+
Sbjct: 299 ALL 301
>gi|295687518|ref|YP_003591211.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756]
gi|295429421|gb|ADG08593.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756]
Length = 333
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 120/317 (37%), Positives = 174/317 (54%), Gaps = 15/317 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIV----IIPLSTKGDRITNRT 54
+ P RIG R S L+LA + ++ + P I +IP+ T GDRI +R
Sbjct: 15 QPPIRIGARGSKLSLAQSGLMQARIAAALGAPAGASKEEIEAFAPLIPIVTSGDRIQDRR 74
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FISH
Sbjct: 75 LMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFISHV 134
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+ L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +
Sbjct: 135 CERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQS 194
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ RL + K ++ + PP+PGQGA+ IET + A + + T +V ER
Sbjct: 195 GLNRLGLGHLTKSWIDPDACPPAPGQGALVIETRAEDIGA-AWLDAVRCRPTTIAVAAER 253
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNG--NRCDAINI 288
L L+GSC++AI A G+ L L +G + E++ +G + +A+ +
Sbjct: 254 GALLALEGSCRTAIGARATLDGARLSMIVEALTPNGAQRFRRHGEITLSGGDDAGEALAL 313
Query: 289 GRDAAQYIRFISNKNVF 305
G +R +
Sbjct: 314 GLKLGAEVRAEGGDAIL 330
>gi|332291690|ref|YP_004430299.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169776|gb|AEE19031.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5]
Length = 304
Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 10/304 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + ++P+ + GD I ++ L E+G
Sbjct: 1 MS-KTIRIGTRDSELALWQAKTVQSQLEAN----GYKTELVPVKSTGDLILDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + A D
Sbjct: 56 TGIFTKTLDVAMLNGIVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKGA---PD 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRR+A L + D RG + TRL KL + + A AG+KR+
Sbjct: 113 YKQACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRIN 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+L + P+P QGA+ I + E +NH+ T ER FL L
Sbjct: 173 VLPENYEVL--DWMIPAPAQGAMLIVAMEEDQFCLEACATLNHKPTALCTYIEREFLKTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A G + F G++ + DG EV + ++ +A+ G D A I
Sbjct: 231 EGGCTAPIGALAEEIGDDIRFRGVLFSLDGATKIEVEQVVSKANAVGFGTDCALDILDDG 290
Query: 301 NKNV 304
+ +
Sbjct: 291 GREL 294
>gi|238578919|ref|XP_002388878.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553]
gi|215450574|gb|EEB89808.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553]
Length = 350
Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 147/322 (45%), Gaps = 17/322 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTE 57
+ F + +R S LA SL ++ ++T GD+ ++ L
Sbjct: 7 ASRTFVLASRASQLAQIQTNMVLDSLKALYPDTTSESNPKFTTSFMTTAGDKNQSQALYL 66
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-- 115
+GGK L+T+E+E L+ E+D VHS KD+PT L +G I L RED D +
Sbjct: 67 LGGKALWTKELEVALLEREVDMLVHSLKDVPTVLPEGCMIGGILEREDPVDSLVVKRGYE 126
Query: 116 ---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAIL 170
+SL DL SV+GTSS+RR A L R + D RG + TR+ KL + AI+
Sbjct: 127 DKWKSLDDLPEGSVVGTSSVRRVAQLKRNYPGLKFQDVRGNLNTRMAKLDAPDGPYAAII 186
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG+ RL + L + QGA+ +E N+ +A EL K I H++T
Sbjct: 187 LAKAGMVRLGMGDRLTCDLAPPTLFHAVSQGALAVEIRNNDKEALELCKRITHQNTAWKC 246
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGN---RCD 284
+ ERA L L+G C + ++ K L G V + DG E + +
Sbjct: 247 SAERACLRVLEGGCSVPVGVSSFLKHDKELVLEISGCVTSLDGSTHVEHTLKEPVTSVEE 306
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
A ++G A+ + + + +
Sbjct: 307 AEDVGGRLARILIETGAREILD 328
>gi|327297350|ref|XP_003233369.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892]
gi|326464675|gb|EGD90128.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892]
Length = 331
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 153/321 (47%), Gaps = 18/321 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKTTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
L L+G C + + KG L IV + DGK E+ ++ N A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCNVHTPEQAE 302
Query: 287 NIGRDAAQYIRFISNKNVFNF 307
G+ A + +
Sbjct: 303 AFGKAVAGEMVEKGAGKILEV 323
>gi|319953182|ref|YP_004164449.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237]
gi|319421842|gb|ADV48951.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237]
Length = 524
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 93/302 (30%), Positives = 149/302 (49%), Gaps = 8/302 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L + + V++P+ + GD + ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSELALWQARTVQKQLKEQ----GYQSVLVPVKSMGDLVLDKPLHELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ ++ GEID AVHS KD+PT L KG+ +A L R + D+ +
Sbjct: 56 TGVFTKTLDIAMLKGEIDIAVHSMKDVPTVLPKGIVQAAVLKRGNYMDILAFKHNEEFLS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+VI T SLRRKA L V+D RG ++TR +KL +N + + A AG++R+
Sbjct: 116 -QKEAVIATGSLRRKAQWLNRYPTHEVVDLRGNVQTRADKLEDNDWNGAIFAAAGLERVG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + + P+P QGA+ + ++ ++ +NH++T ER FL L
Sbjct: 175 LEFENT--IGLTWMVPAPAQGAVVVVALEDDEFSKTACAELNHKETEICTTLERKFLNLL 232
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A K + + G++L+ DGK EV N+ + +
Sbjct: 233 EGGCTAPIGALAIIKDTNVSLKGVLLSVDGKKRIEVEFTSKLGKHENLAEACVERVFSRG 292
Query: 301 NK 302
K
Sbjct: 293 GK 294
>gi|163754811|ref|ZP_02161933.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1]
gi|161325752|gb|EDP97079.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1]
Length = 526
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 9/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RIGTR S LAL A + L H ++P+ GD + ++ L E+G
Sbjct: 1 MSKR-IRIGTRDSELALWQAKVVQEQLE----FLGHKTELVPVKATGDLVLDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT ++ +++ +ID AVHS KD+PT L KG+ +A L R ++RD + +
Sbjct: 56 TGIFTRTLDIAMLNNDIDIAVHSLKDVPTILPKGIVQAAVLKRGNVRDTLVFKNNEEFLS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRL 179
++VI T SLRRKA L ++ D RG + TRL KL + + + + A AG+ R+
Sbjct: 116 -QRNAVIATGSLRRKAQWLHRYPTHTIEDLRGNVNTRLQKLADTEHWNGAIFAAAGLGRI 174
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+E +N+E P+P QGAI I + + + + INHE+T + ER FL
Sbjct: 175 GL--RPEESVNLEWMIPAPAQGAIMITALEADEEIRAICAEINHEETEICTSIERKFLNL 232
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C + I AY K + G++L++DG V+R + ++ + YI
Sbjct: 233 LEGGCTAPIGAIAYIKDEVVTLEGVLLSTDGTKRIYVTRYEKLGEHHDLAEYCSNYIIER 292
Query: 300 SNKNVFN 306
K + +
Sbjct: 293 GGKRLMD 299
>gi|315023924|gb|EFT36926.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-YM]
gi|325335710|gb|ADZ11984.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-GD]
Length = 306
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 8/304 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +IGTR SPLAL A E ++L + I+P+ + GD+ + L +G G
Sbjct: 5 KNTIKIGTRNSPLALWQAKEVAAALEQK----NYATEIVPIVSSGDKNLTQPLYSLGITG 60
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + + K L
Sbjct: 61 VFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSSNAKDKSLE 120
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+
Sbjct: 121 E-LTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMAL- 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E L +P QG + + H +N + E+VK INH T V ER FL L+G
Sbjct: 179 DIPYEHLP--FMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLEG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + I FA + F G + + +GK E++ N G + A + K
Sbjct: 237 GCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELADKLLANGGK 296
Query: 303 NVFN 306
+ +
Sbjct: 297 AIMD 300
>gi|170085353|ref|XP_001873900.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651452|gb|EDR15692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 342
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 143/318 (44%), Gaps = 14/318 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI------PPHNIVIIPLSTKGDRITNRTLT 56
+ F + +R S LA +S + P ++T GD+ ++ L
Sbjct: 2 SRSFILASRESQLAQIQTNSVLASFQALFAANADSSSPTPTFRASFMTTAGDKNQSQALY 61
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115
+GGK L+T+E+E L +D VHS KD+PT L G + L RED D +
Sbjct: 62 LLGGKALWTKELEVALKEHHVDMLVHSLKDVPTTLPDGCVLGGILEREDPVDSLVVKHGE 121
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILL 171
+SL +L SVIGTSS+RR A L R + +D RG + TRL KL A++L
Sbjct: 122 RWKSLDELPSGSVIGTSSVRRIAQLKRKYPHLKFMDVRGNLNTRLAKLDAPEGPYSALIL 181
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ RL I L + QGA+ IE ++ +A EL + + H +T
Sbjct: 182 AKAGLVRLGMGDRITLDLTPPTLFYAVSQGALGIEVRSDDVEALELCERLTHRETQLKCL 241
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINI 288
ERA L L+G C + + +G L G V A DG+ E + N DA +
Sbjct: 242 AERACLRVLEGGCSVPVGVASQLEGGVLSLSGCVTAIDGESHVEHKLEEKVENAEDAEKV 301
Query: 289 GRDAAQYIRFISNKNVFN 306
G A+ + K + +
Sbjct: 302 GTKLAKILLDSGAKKILD 319
>gi|167618302|ref|ZP_02386933.1| porphobilinogen deaminase [Burkholderia thailandensis Bt4]
Length = 278
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 103/266 (38%), Positives = 153/266 (57%), Gaps = 2/266 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPTGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC
Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
+ +A A +G L+ G V +DG
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDG 276
>gi|159036094|ref|YP_001535347.1| porphobilinogen deaminase [Salinispora arenicola CNS-205]
gi|157914929|gb|ABV96356.1| porphobilinogen deaminase [Salinispora arenicola CNS-205]
Length = 322
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 158/308 (51%), Gaps = 11/308 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + +L P + ++ + T GDR + + +G G+F
Sbjct: 4 PLRLGTRGSALAMAQSGQVAQALTAATGNP---VELVEVVTAGDR-SAAPVHRLG-VGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L + ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALTARTIDFAVHSFKDLPTAAAPGLHVAAVPPRQDPRDALVARAGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKE 182
+ +GT +LRR A L + V RG + TRL ++ +A A++LA AG+ RL +
Sbjct: 119 ARVGTGALRRIAQLHALGLQLDVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLDRT 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L+
Sbjct: 179 DTITETLDPMLMLPAPAQGALAVECRSDDSDLVELLAVLDHAPSRATVVAERALLATLEA 238
Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + +A +A G +Y G V++ DG +SR G DA+ IG+ A +
Sbjct: 239 GCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGKALAADLLE 298
Query: 299 ISNKNVFN 306
+ ++
Sbjct: 299 LGADSILG 306
>gi|319943887|ref|ZP_08018168.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599]
gi|319743120|gb|EFV95526.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599]
Length = 315
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 156/299 (52%), Gaps = 7/299 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR S LAL A L H P + ++ ++T+GD+I +R L EIGGKGLF
Sbjct: 9 PLRIATRESRLALWQANHVAELLRARH--PAAGVALLGMTTRGDQILDRPLAEIGGKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E L G + AVHS KD+P L +G ++A + R D RD F+S SL +L
Sbjct: 67 TKELEVALFDGRAELAVHSLKDVPMDLPEGFDLAAVMTRADARDAFVSTRYASLDELPPD 126
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR A L + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 127 AVVGTSSLRRAAQLQARHPGFRIQPLRGNLDTRLGKLDAGQYDAIVLAAAGLTRLGLADR 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I++ L +++ P+PGQG + IE + ++ + +N + ERA +L G+C
Sbjct: 187 IRQYLPLDEMLPAPGQGMLGIEIRADRDDVRQALAFLNDPEAARIAAAERAVSRQLGGNC 246
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAIN---IGRDAAQYIRFI 299
K+ +A A + ++ DG+I V+R G D +G A ++
Sbjct: 247 KTPLAAHARFTASGQMQLDALLADDDGRIA-RVTRVGKVADPKEARVMGEAVAAELKAQ 304
>gi|313206850|ref|YP_004046027.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868]
gi|312446166|gb|ADQ82521.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868]
Length = 303
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 8/304 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +IGTR SPLAL A E ++L + I+P+ + GD+ + L +G G
Sbjct: 2 KNTIKIGTRNSPLALWQAKEVAAALEQK----NYATEIVPIVSSGDKNLTQPLYSLGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + + K L
Sbjct: 58 VFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSSNAKDKSLE 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+
Sbjct: 118 E-LTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMAL- 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E L +P QG + + H +N + E+VK INH T V ER FL L+G
Sbjct: 176 DIPYEHLP--FMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLEG 233
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + I FA + F G + + +GK E++ N G + A + K
Sbjct: 234 GCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELADKLLANGGK 293
Query: 303 NVFN 306
+ +
Sbjct: 294 AIMD 297
>gi|315044601|ref|XP_003171676.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311344019|gb|EFR03222.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 335
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 156/324 (48%), Gaps = 21/324 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R++L+ + P + GD L E+ K
Sbjct: 6 RKTFTIGTRKSNLAVLQTEIVRNALIA--RWPDCQFNVHTRDAAGDLNKVTPLRELTSKN 63
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ E+D VHS KD+PT++ + ++ A++ RED RD + Q +L
Sbjct: 64 LWTEELEEMLLAKELDLVVHSLKDVPTQIPEACKLGAFMKREDPRDALVVKKGQPKTTLA 123
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A + R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 124 ELPAGSVVGTSSVRRTAQIGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 183
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R E I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 184 RTGYEDRISQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 243
Query: 236 FLAELDGSCKSAIAGFAYC---------KGSTLYFYGIVLASDGKIFHEVSRNG---NRC 283
L L+G C + + KG L IV + DG+ EV ++
Sbjct: 244 LLRTLEGGCSAPLGVETEWVPDASDASGKGELLRLRCIVTSVDGREAVEVEKDCGVQTPE 303
Query: 284 DAINIGRDAAQYIRFISNKNVFNF 307
A G+ A + +
Sbjct: 304 QAEAFGKAVADEMVEQGAGKILEV 327
>gi|289423443|ref|ZP_06425247.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L]
gi|289156201|gb|EFD04862.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L]
Length = 307
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 104/301 (34%), Positives = 154/301 (51%), Gaps = 9/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LA+ ++ ++ I +STKGDRI +++L +IG KG+F
Sbjct: 2 KLIVGTRGSKLAVTQTKIVVDAIKS--NFENIDVDIKIISTKGDRILDKSLDKIGDKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122
T+EIE++LI GEID A+HS KDMP++L +GL ++ + RED RD+ I ++ D
Sbjct: 60 TQEIERQLIEGEIDFAIHSLKDMPSELGEGLVLTKTIQREDPRDLLILNSKFKKIDDPIK 119
Query: 123 -----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
IGT S RR A LL ++ + RG I+TRL K+ AI+LA AG+
Sbjct: 120 WLKENDGMRIGTGSKRRSAQLLNINPNLKIDLIRGNIDTRLEKMEKESYDAIVLAAAGVN 179
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RLK + + +L+ P+ GQGA+ IE N + + + I+ + V ER +L
Sbjct: 180 RLKMDWINSYVLDEGSMIPAVGQGALAIEIKEGNQELVNIFEAISDDIANVCVEAERTYL 239
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A ++G C + A L GI + D K+ S G DA IGR+ A I
Sbjct: 240 ATINGGCHMPVGALAQVNEGKLCLKGIYGSEDCKLIISSSLEGPLEDAQRIGRELADKIL 299
Query: 298 F 298
Sbjct: 300 R 300
>gi|302543510|ref|ZP_07295852.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC
53653]
gi|302461128|gb|EFL24221.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC
53653]
Length = 322
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 159/313 (50%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + ++ ++ P + ++ ++T GD ++ L +IGG G+F
Sbjct: 8 PLRLGTRRSALAMAQSGLIADAVRELTGRP---VELVEITTYGD-VSREQLAQIGGTGVF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+SGEID AVHS KD+PT +GL ++A RED RD I+ + + L
Sbjct: 64 VSALREALLSGEIDFAVHSLKDLPTAEPEGLTLAAIPRREDPRDALIARDGLTFEQLPPG 123
Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR A L W D+ + RG + TR+ + + + A++LA AG+ RL
Sbjct: 124 ARIGTGSPRRAAQLNAWARSVGLDVETVPIRGNVGTRIGYVRSGELDAVVLAAAGLSRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ EIL+ + P+PGQGA+ +E ++ + L+ ++ T +V ER+ LA L
Sbjct: 184 RIGEATEILDADHVLPAPGQGALAVECAADDAELTALLAGLDDPHTRAAVTAERSLLAAL 243
Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRD 291
+ C + + A G + G+V +DG ++S G A ++GR+
Sbjct: 244 EAGCSAPVGALADLLGDGQVVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPDQAADLGRE 303
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 304 LAAEMLAKGAAGL 316
>gi|161486849|ref|NP_781392.2| porphobilinogen deaminase [Clostridium tetani E88]
Length = 290
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 149/292 (51%), Gaps = 6/292 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ TR S LA + + + + + T GD+I +RTL +IGGKGLF
Sbjct: 2 KLIVATRRSILAQTQTDLVIKKIEEDN---EVKCEKLLIQTLGDKILDRTLDKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK L+ G+ AVHS KD+P ++ I A RED+RD F+S +L
Sbjct: 59 IKEIEKALLDGKAHMAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGTSS RR + + R D+ V+ RG ++TRL K+ +LA AG+KRL E+V
Sbjct: 119 SKIGTSSRRRSSQIKILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEV 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + E+ P+ GQGA+ IE + +K I+HE+T V ER+F+ L G C
Sbjct: 179 ITDYFSPEEMVPAIGQGALGIEI-KKYEDVIDYIKGIDHEETRICVEGERSFMEALKGDC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
S I A + +Y G + +GKI + G + + +G+ A I
Sbjct: 238 HSTIGAHAIVENDLMYMTG-IFEVNGKIVKKD-IEGKKENYKQLGKTLADRI 287
>gi|126348046|emb|CAJ89766.1| putative porphobilinogen deaminase [Streptomyces ambofaciens ATCC
23877]
Length = 311
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PGVRTEVVPVKTTGDKWLGD-LSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+S E D AVH KD+P L G +A+L R+D+RD I +L +L
Sbjct: 64 KEVDAALLSDEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPDGLTLDELPA 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ +
Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVAGLERIGRRD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + H T + ER FL L G
Sbjct: 184 VISEVLSPETMMPPIGAGILALQCREGDTDLIEAVSGLGHPATHREASAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A G L V DGK R D +G A + +
Sbjct: 244 CNSPIAGYARVDRGGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 EIID 307
>gi|197106866|ref|YP_002132243.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1]
gi|238058996|sp|B4RC21|HEM3_PHEZH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|196480286|gb|ACG79814.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1]
Length = 320
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 116/320 (36%), Positives = 173/320 (54%), Gaps = 16/320 (5%)
Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPH---NIV----IIPLSTKGDRITN 52
M +P RIG R S L+L + + + + P + +IP++T GDR+ +
Sbjct: 1 MPTQPVVRIGARGSKLSLTQSGIVQRRIAAALGVDPDNAAEVERVAPLIPITTTGDRVQD 60
Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L +GL I+A RED RD FIS
Sbjct: 61 RRLLEIGGKGLFTKEIEEALMDGRIDCAVHSMKDMPAELPEGLCIAAIPEREDPRDAFIS 120
Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172
+ L+DL +++GT+SLRR+A L R D+ RG +ETRL KL + AILLA
Sbjct: 121 RGPERLEDLTEGAILGTASLRRQAQCLHRRPDLEAKLLRGNVETRLGKLEAGEYDAILLA 180
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
Y+G++RL + K +++ ++ PP+PGQGA+ +ET + + + T +V
Sbjct: 181 YSGLRRLGLGHLPKSLIDPKEAPPAPGQGALAVETRAADRDL-PWAQALRCRPTTLAVAA 239
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-------A 285
ER L L+GSC++ I A+ +G T L+ DGK+ S A
Sbjct: 240 ERGALIALEGSCRTPIGAHAWLEGGTCKLIVEALSPDGKLRFRHSGEAELSQMADPEASA 299
Query: 286 INIGRDAAQYIRFISNKNVF 305
++G ++ + +
Sbjct: 300 RDLGLSLGLAVKEEAGDAIV 319
>gi|302535112|ref|ZP_07287454.1| porphobilinogen deaminase [Streptomyces sp. C]
gi|302444007|gb|EFL15823.1| porphobilinogen deaminase [Streptomyces sp. C]
Length = 322
Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 17/314 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR S LA++ + ++ + P + ++ ++T GD ++ L +IGG G+
Sbjct: 7 QPLRLGTRRSKLAMSQSGHVAEAVRAITGRP---VELVEITTYGD-VSRENLAQIGGTGV 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L+ GE+D AVHS KD+PT L I+A RED RD ++ + + L
Sbjct: 63 FVTALRDALVRGEVDFAVHSLKDLPTAQPDELVIAAMPKREDPRDALVARDGLTFEQLPD 122
Query: 124 HSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +GT S RR A L + + RG ++TR+ + + + A++LA AG+ R+
Sbjct: 123 GARVGTGSPRRMAQLNAYARSLGKSVETVAIRGNVDTRIGFVRSGELDAVVLAAAGLNRI 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++L++++ P+PGQGA+ +E ++ + ++ T +V ERA LA
Sbjct: 183 GRADEATDLLSVDNVLPAPGQGALAVECLASDADLISALGRLDDPHTRAAVTAERALLAA 242
Query: 240 LDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGR 290
L+ C + + A + G+V DG ++S G +A+ +GR
Sbjct: 243 LEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGSTLVQLSTTGPVPQSYDEAMALGR 302
Query: 291 DAAQYIRFISNKNV 304
+ A + +
Sbjct: 303 ELADEMLAKGAAGL 316
>gi|195170703|ref|XP_002026151.1| GL16182 [Drosophila persimilis]
gi|194111031|gb|EDW33074.1| GL16182 [Drosophila persimilis]
Length = 630
Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats.
Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 24/301 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRTLTE 57
++K R+G+R S LAL + P I +ST GDR+ N +L +
Sbjct: 4 QEKVIRVGSRKSELALIQTKHV------IGPTPELYLKQRFEIHTMSTFGDRVLNVSLPK 57
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---T 114
IG K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 58 IGEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQ 117
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172
++ L SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA
Sbjct: 118 GHTIASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILA 177
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T +
Sbjct: 178 QAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILA 237
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRC 283
ER+FL L G C + +A ++ +G L G V + DG I +
Sbjct: 238 ERSFLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAIEIRNHLSCALS 297
Query: 284 D 284
+
Sbjct: 298 E 298
>gi|296809948|ref|XP_002845312.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
gi|238842700|gb|EEQ32362.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
Length = 330
Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 151/320 (47%), Gaps = 17/320 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R++L V + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRNAL--VARWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPETCTLSAIIKREDPRDALVVKKGQPNMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SVIGTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVIGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ + + GQGA+ +E + + E+++ I + T + ER
Sbjct: 183 RTGHGYRISQYLDSKNGQMLHAVGQGALGVEIRAGDARMIEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGN---RCDAIN 287
L L+G C + + T L IV + DGK E ++G+ A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVQDTDGKEMLRLRCIVTSIDGKEAVETEKDGDVQTPEQAEA 302
Query: 288 IGRDAAQYIRFISNKNVFNF 307
G+ A + +
Sbjct: 303 FGKAVADEMVGKGAGKILEV 322
>gi|239929697|ref|ZP_04686650.1| porphobilinogen deaminase [Streptomyces ghanaensis ATCC 14672]
gi|291438017|ref|ZP_06577407.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672]
gi|291340912|gb|EFE67868.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672]
Length = 319
Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 156/317 (49%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ V P + ++P++T GD + L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVRQVTGRP---VELVPITTYGDT-SREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L GE+D AVHS KD+PT L ++A RED RDV + D
Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDIPTTQPDELVVAAIPVREDPRDVMVGRDVPKFTD 116
Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L +I + RG ++TR+ + + + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARAHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGM 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+
Sbjct: 177 NRVGRSEEVTDFLSVDTVLPAPGQGALAVECTADNAPLIAALAELDDPLTRAAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD----AIN 287
LA L+ C + + A G + G+V +DG ++S G + A+
Sbjct: 237 LAALEAGCSAPVGALADLLGDGQTVKEMRLRGVVGTTDGTKLVQLSTTGPVPETHEAAMA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+G + A + +
Sbjct: 297 LGSELATEMLAQGAAGL 313
>gi|319956650|ref|YP_004167913.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511]
gi|319419054|gb|ADV46164.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511]
Length = 317
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 95/301 (31%), Positives = 153/301 (50%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL A+ + + P + ++ ++++GD+I +R L +GGKG F
Sbjct: 3 KLTIVTRASQLALWQAYHIKDRIEKAR--PELEVELMEITSRGDKILDRPLALVGGKGHF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E ++++G AVHS KD+PT + +GL+++A R+D DVF+SH SL+ L
Sbjct: 61 TKELEDEMLAGRAQMAVHSLKDVPTFIPEGLELAAITERQDQSDVFLSHRFSSLEALPEG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LAY G+ RL K
Sbjct: 121 AVVGTTSLRRRMQLLQRRPDLIVKDLRGNVNTRLRKLAEGQYDAIILAYIGLARLDLLKE 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + +E P GQ A+ IE + + + L ++ +T ER F+A + C
Sbjct: 181 IPHVQKLEWMIPPMGQAALGIEILSGDEELRHLAMELDDPETHLCTEIEREFVAAVGAGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A A L ++ D +A G+ A+ + +
Sbjct: 241 SAPVAVNARIIDGELDLRAMLGYPDASEVLYEELVLPMEEATGAGKRLAEKMIADGALEL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|238916686|ref|YP_002930203.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750]
gi|259647796|sp|C4Z552|HEM3_EUBE2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238872046|gb|ACR71756.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750]
Length = 295
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 149/294 (50%), Gaps = 7/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+RIGTR S LAL + + + + + P ++ + T GD++T++ L IG KG F
Sbjct: 3 YRIGTRGSKLALVQSEYVKRRMEEAY--PEDTFELVIIKTTGDKVTDKPLAAIGTKGFFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+SG ID AVHS KDMP + GL + RED RDV I TA S +L +
Sbjct: 61 KEIEEALLSGSIDMAVHSMKDMPAECAAGLTFAKAWKREDCRDVLILKTAGSFSELPSGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEK 183
VIGT SLRR L R DI RG ++TR+NKL ++ I+LA AG+ RL +
Sbjct: 121 VIGTGSLRRACQLAMLRPDIQFTAIRGNVDTRINKLMDDSYGLDGIVLAAAGLNRLGRSS 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L+ E P+P QG + IET N + + + ++ +++ ER FL G
Sbjct: 181 EITEYLDPEVVIPAPAQGVLAIETAEVNTELLDKINALSDDNSDREAVAERTFLRLTGGG 240
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + + K L + D + G D+ +G +AA+ +
Sbjct: 241 CHAPVGAHCVTKDNGDLRMVVLFGNDDCSRILRIEVTGT--DSEAVGHEAARML 292
>gi|134281147|ref|ZP_01767856.1| porphobilinogen deaminase [Burkholderia pseudomallei 305]
gi|134247453|gb|EBA47538.1| porphobilinogen deaminase [Burkholderia pseudomallei 305]
Length = 329
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|190570895|ref|YP_001975253.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019411|ref|ZP_03335217.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357167|emb|CAQ54582.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994833|gb|EEB55475.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 292
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 112/295 (37%), Positives = 161/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL A E + L++ P ++ II + T GD+ N TL EIGGKGLF
Sbjct: 3 VKIGTRGSDLALIQALEAKQRLLE--SFPNLSVEIIKIKTSGDKYANVTLAEIGGKGLFL 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE +L+ ID AVHS KD+P K L I L R DVFISH +SLK L +
Sbjct: 61 REIEAELLKNNIDMAVHSLKDVPAFFSKDLTIPCVLERLSPCDVFISHKYKSLKTLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSS+RRK LL R D++V+ RG + TR L N ++LA AG+ RLKK +I
Sbjct: 121 TIATSSIRRKVQLLNLRPDLNVVPLRGNVTTR---LQNQNFDGMILAEAGLIRLKKYHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQG ICI+ N+ K +L++ IN+ ++ ER+F+ ++GSC
Sbjct: 178 TEVLPPKVMLSAVGQGTICIQCRKNDIKVIDLLEKINNNMSFIRAKSERSFMKTVNGSCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + L+ Y ++ ++ + R DA +G DA ++
Sbjct: 238 TPLAALAEYVSENMLHLYCMLAGE--RVIYFTERTSFVEDAEKMGMDAGLELKSK 290
>gi|332016383|gb|EGI57296.1| Porphobilinogen deaminase [Acromyrmex echinatior]
Length = 358
Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats.
Identities = 102/277 (36%), Positives = 155/277 (55%), Gaps = 7/277 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL L ++H P I+ ++TKGD+I +++L +IG K LFT
Sbjct: 10 IRVGSRKSELALIQTKHVIQCLKEIH--PKKEFEIVTMNTKGDKILDKSLPKIGEKSLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122
EE+E L +G +D VHS KD+PT L G+ + A L RED RD + ++L L
Sbjct: 68 EELELALENGSVDFVVHSLKDLPTILPVGMALGAILKREDPRDAVVMSKKFKDKTLSTLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRLK 180
SVIGTSSLRR A LLR + + + RG + TRL KLN+ AI+LA AG+KR+
Sbjct: 128 KDSVIGTSSLRRSAQLLRNMPHLKIENIRGNLNTRLKKLNDENGPYAAIILAAAGLKRMG 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++L +E+ + GQGA+ +E ++ K + +++ + + + CER+FL L
Sbjct: 188 WEDKISQLLELEEALYAVGQGALGVECRESDWKIRSILEPLFDLEATLTCVCERSFLKTL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
G C + +A + K + L G V + DG+ +
Sbjct: 248 GGGCSAPVAVSSSLKKNELTITGAVWSLDGQTLITDT 284
>gi|167644091|ref|YP_001681754.1| porphobilinogen deaminase [Caulobacter sp. K31]
gi|189042878|sp|B0T287|HEM3_CAUSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167346521|gb|ABZ69256.1| porphobilinogen deaminase [Caulobacter sp. K31]
Length = 318
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 170/316 (53%), Gaps = 12/316 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV-HKIPPHNI----VIIPLSTKGDRITNRTL 55
M ++P RIG R S L+LA + ++ + P +I +IP+ T GDRI +R L
Sbjct: 1 MSRQPIRIGARGSKLSLAQSGLMQARIAAALGAGPGDDIDAFAQLIPIVTSGDRIQDRRL 60
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
EIGGKGLFT+EIE+ L+ G IDCA+HS KDMP +L GL ++A RED RD FISH A
Sbjct: 61 MEIGGKGLFTKEIEEALLDGRIDCAIHSLKDMPAELPPGLVLAAVPEREDPRDAFISHVA 120
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+ L+DL+ + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +G
Sbjct: 121 ERLEDLSKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQSG 180
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + L+ PP+PGQGA+ IET + ++ + + T +V ER
Sbjct: 181 LNRLGLGHITNSWLDPLAAPPAPGQGALVIETRAEDVDL-PWLQAVRCQATTLAVAAERG 239
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN------RCDAINIG 289
L L+GSC++A+ A G L L DG + A +G
Sbjct: 240 ALYALEGSCRTAVGAHARLDGLILTMIVEALTPDGVQRFRREGSATLSSLDAADQARALG 299
Query: 290 RDAAQYIRFISNKNVF 305
+ +R +
Sbjct: 300 LELGGAVRAEGGPALI 315
>gi|53718657|ref|YP_107643.1| porphobilinogen deaminase [Burkholderia pseudomallei K96243]
gi|53725180|ref|YP_102499.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344]
gi|76808885|ref|YP_332640.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b]
gi|121600693|ref|YP_993593.1| porphobilinogen deaminase [Burkholderia mallei SAVP1]
gi|124386445|ref|YP_001028944.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10229]
gi|126449020|ref|YP_001081141.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10247]
gi|126455102|ref|YP_001065357.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a]
gi|167003503|ref|ZP_02269289.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20]
gi|167901767|ref|ZP_02488972.1| porphobilinogen deaminase [Burkholderia pseudomallei NCTC 13177]
gi|217419743|ref|ZP_03451249.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576]
gi|226194325|ref|ZP_03789923.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9]
gi|237811340|ref|YP_002895791.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346]
gi|242316542|ref|ZP_04815558.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b]
gi|254178350|ref|ZP_04885005.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399]
gi|254190785|ref|ZP_04897292.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237]
gi|254199404|ref|ZP_04905770.1| porphobilinogen deaminase [Burkholderia mallei FMH]
gi|254205719|ref|ZP_04912071.1| porphobilinogen deaminase [Burkholderia mallei JHU]
gi|254260166|ref|ZP_04951220.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a]
gi|254298288|ref|ZP_04965740.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e]
gi|254357877|ref|ZP_04974150.1| porphobilinogen deaminase [Burkholderia mallei 2002721280]
gi|61213345|sp|Q62LC0|HEM3_BURMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|61213357|sp|Q63W73|HEM3_BURPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123599913|sp|Q3JUW3|HEM3_BURP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513523|sp|A3NSN6|HEM3_BURP0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201495|sp|A3MLK5|HEM3_BURM7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201496|sp|A2SAH5|HEM3_BURM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201497|sp|A1V5U0|HEM3_BURMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52209071|emb|CAH35011.1| putative porphobilinogen deaminase protein [Burkholderia
pseudomallei K96243]
gi|52428603|gb|AAU49196.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344]
gi|76578338|gb|ABA47813.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b]
gi|121229503|gb|ABM52021.1| porphobilinogen deaminase [Burkholderia mallei SAVP1]
gi|124294465|gb|ABN03734.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10229]
gi|126228744|gb|ABN92284.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a]
gi|126241890|gb|ABO04983.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10247]
gi|147749000|gb|EDK56074.1| porphobilinogen deaminase [Burkholderia mallei FMH]
gi|147753162|gb|EDK60227.1| porphobilinogen deaminase [Burkholderia mallei JHU]
gi|148027004|gb|EDK85025.1| porphobilinogen deaminase [Burkholderia mallei 2002721280]
gi|157808153|gb|EDO85323.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e]
gi|157938460|gb|EDO94130.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237]
gi|160699389|gb|EDP89359.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399]
gi|217397047|gb|EEC37063.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576]
gi|225933410|gb|EEH29399.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9]
gi|237505195|gb|ACQ97513.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346]
gi|242139781|gb|EES26183.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b]
gi|243060977|gb|EES43163.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20]
gi|254218855|gb|EET08239.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a]
Length = 329
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|255037032|ref|YP_003087653.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053]
gi|254949788|gb|ACT94488.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053]
Length = 307
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 6/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL A+ L I+ + TKGD+I +R+L++IG KG+FT
Sbjct: 3 IKIGTRGSKLALWQAYYVEELLQR----GGVETEIVIIETKGDKILDRSLSKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EE+E +L SG+ID AVHSAKD+ + L +I A+ RE DV +SH
Sbjct: 59 EELEDQLRSGDIDIAVHSAKDLQSHLDDAFEIIAFTEREQANDVLVSHDTTLSLKSGESF 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS RR A+L + I +D RG ++TRL KL + A+LLA+AG+ R++ + I
Sbjct: 119 TVGTSSTRRVAVLKHYYPHIKTVDMRGNLQTRLRKLEEGQCDALLLAFAGVHRMEYDDKI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E L +++F P+ GQG++ IET V + K +L +++N+E T + ERAFL L G
Sbjct: 179 AEHLLLDEFTPAVGQGSVAIETAVALDPAKKSKLRELLNNEHTETCLLAERAFLKRLQGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + G A + G +++ DG + G +G A+ +
Sbjct: 239 CSIPVFGMATLHEDEIRMTGGIISLDGTELIRKTETGATAFPQELGTALAEELLAAGADR 298
Query: 304 VFN 306
+
Sbjct: 299 ILQ 301
>gi|126439305|ref|YP_001058121.1| porphobilinogen deaminase [Burkholderia pseudomallei 668]
gi|166201498|sp|A3N700|HEM3_BURP6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|126218798|gb|ABN82304.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 668]
Length = 329
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMVLPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|253579011|ref|ZP_04856282.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39B_FAA]
gi|251849954|gb|EES77913.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39BFAA]
Length = 317
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 91/305 (29%), Positives = 150/305 (49%), Gaps = 11/305 (3%)
Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNR 53
M +K IG+R S LA+ + +S + ++ + I+ + T GD I +R
Sbjct: 12 MRRKMMTEVIIGSRESKLAVLQSEMVKSYIEQKNREENAGSEITVNILTMKTTGDIILDR 71
Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113
TL ++GGKGLF +E+++ L+ G+ + +VHS KDMP ++ K L + A+ RED RDV +
Sbjct: 72 TLDKVGGKGLFVKELDRALLDGKSNLSVHSLKDMPMEVPKELPLLAFSKREDPRDVLVLP 131
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
+ +L +G SSLRR L + ++ V RG ++TRL KL+ + ++LA
Sbjct: 132 EG--VAELDPDKPLGCSSLRRTLQLKKLYPEMEVKSIRGNLQTRLRKLDEGEYSGLILAA 189
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+KRL E I ++ PS GQG + ++ + D W + E
Sbjct: 190 AGLKRLGLENRISRYFTPDEMIPSAGQGILAVQGRKGEDY--GYLDGYCDRDAWLAGTAE 247
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
RA++ LDG C S +A FA G ++ G+ + + G D +G A
Sbjct: 248 RAYVKYLDGGCSSPVAAFAEVDGDEIFIRGLYYSEATGKWLTGQIRGAAEDGEKLGIALA 307
Query: 294 QYIRF 298
+ ++
Sbjct: 308 KQLKS 312
>gi|317180043|dbj|BAJ57829.1| porphobilinogen deaminase [Helicobacter pylori F32]
Length = 306
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ERAF+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLERAFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|169869297|ref|XP_001841215.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130]
gi|116497683|gb|EAU80578.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130]
Length = 351
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 147/323 (45%), Gaps = 18/323 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRTLTE 57
+ + F + R S LA A + L ++ +ST GD+ ++ L
Sbjct: 7 QPRTFVVAARNSQLAQVQANSVLAQLEQLYASSDDPSKPKFTTSFMSTAGDKNQSQALYL 66
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ- 116
+GGK L+T+E+E L E+D VHS KD+PT L +G + A L RED D + +
Sbjct: 67 MGGKALWTKELEVALKDKEVDMLVHSLKDVPTTLPEGCLLGAILEREDPVDALVVKKGKE 126
Query: 117 ----SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAIL 170
SL+DL SV+GTSS+RR A L R + +D RG + TRL KL+ + A++
Sbjct: 127 GVWKSLEDLPEGSVVGTSSVRRVAQLKRKFPGLRFLDVRGNLNTRLAKLDAEDGPYAALI 186
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG+ RL I LN + QGA+ +E ++ ++ E+++ + H T
Sbjct: 187 LAKAGLVRLGWGDRITADLNPPTLYHAVSQGALAVEIRDDDLESLEILQKLTHRGTDWKC 246
Query: 231 NCERAFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEV---SRNGNRC 283
ERA L L+G C + + L G V + DG E + +
Sbjct: 247 RAERALLRVLEGGCSVPVGVYTTLTKEGGDELLEITGCVTSLDGSEHVEESLKEKVTSVE 306
Query: 284 DAINIGRDAAQYIRFISNKNVFN 306
+A +G A+ + + +
Sbjct: 307 EAEAVGVKLAKVLMEKGATRILD 329
>gi|317013683|gb|ADU81119.1| porphobilinogen deaminase [Helicobacter pylori Gambia94/24]
Length = 306
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + T GD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKEC---SMESEIQIVKTTGDKILDAPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL +
Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ ++ + K
Sbjct: 239 CQIPIGVHASLMGDEVKIRAVLGLPNGKEVITKEKQGDKTKAFDLIQELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|229586831|ref|YP_002845332.1| porphobilinogen deaminase [Rickettsia africae ESF-5]
gi|259646263|sp|C3PNS9|HEM3_RICAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|228021881|gb|ACP53589.1| Porphobilinogen deaminase [Rickettsia africae ESF-5]
Length = 351
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFAYC 254
++ IA ++
Sbjct: 243 RTPIAAYSQY 252
>gi|148693633|gb|EDL25580.1| mCG10727, isoform CRA_a [Mus musculus]
Length = 371
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 95/334 (28%), Positives = 141/334 (42%), Gaps = 58/334 (17%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 58 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H K L
Sbjct: 116 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL-- 173
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKE 182
RG + TRL KL+ + AI+LA AG++R+ +
Sbjct: 174 ------------------------ETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQ 209
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+G
Sbjct: 210 NRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLEG 269
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD------- 284
C +A K LY G V + DG + + +G D
Sbjct: 270 GCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLVGIT 329
Query: 285 -----------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 330 ARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 363
>gi|238650859|ref|YP_002916714.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic]
gi|259646264|sp|C4K265|HEM3_RICPU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238624957|gb|ACR47663.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic]
Length = 351
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFAYC 254
++ IA ++
Sbjct: 243 RTPIAAYSQY 252
>gi|149194367|ref|ZP_01871464.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2]
gi|149135542|gb|EDM24021.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2]
Length = 295
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 10/298 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL A + L ++ H + + ++T GD+I ++ L IGGKGLF
Sbjct: 2 KLTIATRGSKLALWQAEWVKKRLENL----GHEVDLKIVTTTGDKILDKPLASIGGKGLF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGL-QISAYLPREDIRDVFISHTAQSLKDLAL 123
+E+E+ L+ GE AVHS KD PT+ K ++A RE + DVF+S T ++L +L
Sbjct: 58 IKEVEEALLRGEAQIAVHSLKDFPTEYNKEHFTLAAVPKREAVEDVFLSETFETLAELPH 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-- 181
++V+GTSS+RR L +R D+ + D RG ++TR+NKL + AI+LAYAG+KRL
Sbjct: 118 NAVVGTSSIRRAMQLKAFREDLVISDLRGNVDTRINKLKKGEYDAIILAYAGVKRLNLIK 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E EIL+ + P+ GQGA+ IET + + K E VK +N T V ER F+ EL+
Sbjct: 178 EVKYFEILDTDIMIPAMGQGALGIET-IKDEKVIEAVKPLNDLWTKIEVTIERDFIDELN 236
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + + A ++ +L + K+ + + N GR+ A+ +
Sbjct: 237 LGCHAPVGVNAKIMVDDSIKIKAAILDKNNKVIKK-EMVVPFDEWENAGREFAEEFKE 293
>gi|91218004|ref|ZP_01254956.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755]
gi|91183862|gb|EAS70253.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755]
Length = 302
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 10/304 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K IGTR S LA+ A + ++ L + ++ ++ P+ + GD ++ L E+G
Sbjct: 1 MS-KTISIGTRDSELAMWQAHKVKTLLENQ----GYSTILKPVKSTGDLNLDQPLYEMGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ L+ GEID AVHS KD+PT L KG+ A LPR + D+ + H S
Sbjct: 56 TGIFTKTLDVALVKGEIDIAVHSMKDVPTALPKGVVQGAVLPRANTSDILL-HKGLSF-- 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L I T SLRRKA LR V + RG + TRL KL N+ + + A AG++R+
Sbjct: 113 LENKGTIATGSLRRKAQWLRKYPQHKVENLRGNVNTRLQKLQNHDWNGAIFAAAGLERIN 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + ++ P+P QGA+ + T +N ++ ++ +NH DT +V ER FL L
Sbjct: 173 LK--PDNHIELDWMIPAPAQGAMLVVTMEHNTVCRKALEKLNHTDTALAVRVEREFLKTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A K + F + + DGK + + D G+ A+++
Sbjct: 231 EGGCTAPIGALATIKDREINFRAGLFSLDGKQTFTIHEVISIDDVEGFGKRCAEHVLKQG 290
Query: 301 NKNV 304
+
Sbjct: 291 GGKL 294
>gi|312375045|gb|EFR22490.1| hypothetical protein AND_15185 [Anopheles darlingi]
Length = 638
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 149/314 (47%), Gaps = 34/314 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK R+G+R S LAL + L ++ P I ++T GDR+ N++L +IG K
Sbjct: 9 AKKTIRVGSRKSELALTQTKHVIARLQKLN--PDVVYEIHTMTTVGDRVLNKSLPKIGEK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + H +L
Sbjct: 67 SLFTKDLEDALRTGGVDFVVHSLKDLPTALPVGMAIGAVLEREDPRDALVLNERHRGSTL 126
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
L S+IGTSSLRR A L R+ ++V D RG + TRL KL+ +K I+LA AG+
Sbjct: 127 ASLPRGSLIGTSSLRRSAQLARYYRHLNVCDIRGNLNTRLAKLDADASKFAGIILAQAGL 186
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + I +++ + + GQGA+ +E N+ ++ + H +T + ER+F
Sbjct: 187 VRMGWNERIDQVIEPSEILYAVGQGALAVECRSNDEYILGMLAKLCHLETQCRILTERSF 246
Query: 237 LAELDGSCKSAIAGFAYCKGS---------------------------TLYFYGIVLASD 269
L L G C + +A K L G V + D
Sbjct: 247 LRTLGGGCSAPVAVRTELKRQADSDSSNNNNSNVQRKRSSVDTEQGTFQLQVEGAVWSLD 306
Query: 270 GKIFHEVSRNGNRC 283
GK S
Sbjct: 307 GKTEIRTSGECTLD 320
>gi|239946738|ref|ZP_04698491.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921014|gb|EER21038.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 350
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 97/250 (38%), Positives = 146/250 (58%), Gaps = 3/250 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIQTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L R+D RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAVLERKDPRDVFVCLNYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+ FRG +++R+ KL + A +LAYAG+KRL
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKATVFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHIPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFAYC 254
++ IA ++
Sbjct: 243 RTPIAAYSKY 252
>gi|269128634|ref|YP_003302004.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183]
gi|268313592|gb|ACY99966.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183]
Length = 311
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 12/305 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S +A + L + H + ++ ++T+GD I+ L ++GG G+F
Sbjct: 4 LRLGTRKSLMATTQSRRVGDELTRLT---GHAVELVGVTTEGD-ISRAHLAQMGGTGVFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ KLISGE+D AVHS KD+PT +G+ ++A R+D RD L DL +
Sbjct: 60 SALRDKLISGEVDFAVHSLKDLPTAPAEGITLAAVYRRDDPRDALCGP--LKLADLPRGA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L R D+ ++ RG +TRL K+ + + A++LAYAG+ R+ + +
Sbjct: 118 RVGTGSPRRVAQLRALRGDLEIVPIRGNADTRLRKVADGELDAVVLAYAGLGRIGRRDAV 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ + D P+PGQGA+ +E + EL+ ++H T +V ER LA L+ C
Sbjct: 178 VEVFDPADMLPAPGQGALALECRSDRLDLIELLATVDHAPTRAAVTAERTVLAVLEAGCS 237
Query: 246 SAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + +A + S +L+ V DG +S +G+ A IGR+ A +
Sbjct: 238 APVGAYATVEDSAEEEQPSLHLSACVAGIDGARQVRLSGSGHPERAEEIGRELAAQLLAQ 297
Query: 300 SNKNV 304
+
Sbjct: 298 GADQL 302
>gi|282865792|ref|ZP_06274842.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
gi|282559436|gb|EFB64988.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
Length = 311
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P+ T GD L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRNELAA--RYPALRTEVVPVRTTGDTWLGD-LSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLDELPP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S IGTSS+RR A L ++ + FRG RL KL + A+LLA +G++R+ +
Sbjct: 124 GSRIGTSSVRRTAQLAASHPELRCVPFRGNANRRLAKLAAGEVDALLLAVSGLRRIGRPD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI +IL E P G G + ++ ++ + V +NH T+ + ER FL L G
Sbjct: 184 VISDILGPETMIPPIGAGVLALQCRQDDTATIDAVAALNHPATYREITAERMFLHVLQGH 243
Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L G V DGK D +G A + +
Sbjct: 244 CNSPIAGYATSHRNGDLSLRGCVFTPDGKTVLNAHEWAGPLDPATLGTSVAVTLLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 ELID 307
>gi|315497777|ref|YP_004086581.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48]
gi|315415789|gb|ADU12430.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48]
Length = 314
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 113/309 (36%), Positives = 173/309 (55%), Gaps = 8/309 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIV---IIPLSTKGDRITNRTLTEIGGK 61
+IGTR S LA + + + P + ++ ++T+GDRI +R L E GGK
Sbjct: 5 LKIGTRGSRLATTQCGWVQRQIVTALGHDPALSHEVAPLVIITTQGDRIQDRRLIEAGGK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT+EIE L+SGE+D AVHS KDMP + + GL + A+ RED RD F+S +SL+DL
Sbjct: 65 QLFTKEIEDALLSGEVDVAVHSLKDMPAEDIPGLSLCAFPVREDPRDAFVSLKYRSLEDL 124
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT+SLRR+A L R D+ V+ RG ++TRL+KL A+LLA AG+KR+
Sbjct: 125 PQGAKLGTASLRRQAQALAVRPDLEVVMLRGNVDTRLSKLEAGHCDAMLLAAAGLKRMGL 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK ++ + FP +PGQGA+ I+ N+ QE +K ++H +T ++ ER L L+
Sbjct: 185 EAHIKSYIDPDLFPCAPGQGALAIQCRTNDLD-QEWIKRLHHVETHLQISAERGALVALE 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRF 298
SC++A+ +A +G L + L +DG+ + A +G Q IR
Sbjct: 244 ASCRTAVGAYAKIEGDALTLFVEALTADGRTRWQRRETIIAPTLETAHALGLGLGQSIRD 303
Query: 299 ISNKNVFNF 307
+ + +
Sbjct: 304 EAGDRLIQY 312
>gi|258541892|ref|YP_003187325.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01]
gi|256632970|dbj|BAH98945.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01]
gi|256636027|dbj|BAI01996.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-03]
gi|256639082|dbj|BAI05044.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-07]
gi|256642136|dbj|BAI08091.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-22]
gi|256645191|dbj|BAI11139.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-26]
gi|256648246|dbj|BAI14187.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-32]
gi|256651299|dbj|BAI17233.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654290|dbj|BAI20217.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-12]
Length = 357
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 111/320 (34%), Positives = 165/320 (51%), Gaps = 21/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----NIVIIPLSTKGDRITNRTLTEIG 59
P R+GTR SPLAL R+ L + + P ++T GD++ NR L EIG
Sbjct: 39 PLRVGTRGSPLALVQT---RAFLTTLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIG 95
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I +
Sbjct: 96 GKGLFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLAQS 155
Query: 120 D-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172
D L ++IG +S+RR+A +L R D+ RG ++TRL+KL ++ A LLA
Sbjct: 156 DPDDPYSALPEGALIGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAAHQCQATLLA 215
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+KRL + +L+ P+ GQG + + ++ + +EL+ I +
Sbjct: 216 LAGLKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDIELRELLSAIEDYEARAVATA 275
Query: 233 ERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
ER+ LAELDGSC++ I G+A + L+ G+V DG + S G DA
Sbjct: 276 ERSLLAELDGSCRTPIGGYAQLIPIVAGEDPKLHLTGLVAREDGSFLLKRSITGLPEDAA 335
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+G++ + +R S ++F
Sbjct: 336 RLGKELGESLRKDSPSDIFE 355
>gi|254519530|ref|ZP_05131586.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA]
gi|226913279|gb|EEH98480.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA]
Length = 290
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 105/293 (35%), Positives = 165/293 (56%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA A + + + + I ++++ T+GDR + TL +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQADKVIELIKEKNNINAKKLLVV---TEGDRRLDVTLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L + ++ A R+DIRDVF+S +DL +
Sbjct: 60 KEIEYALLNKEAHAAVHSMKDVPFELSEDFELVAIPERDDIRDVFVSSNGIHFQDLKEGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSS+RR A+L + R D++++ RG ++TRL+K+ I+LA AGIKRL E +I
Sbjct: 120 IIGTSSIRRAAMLKKLRGDLNIVPIRGNVQTRLDKMKKENMDGIILAAAGIKRLGLEDII 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++F P+ GQGA+ IE N +K +++++ +V ER+F+ +L+G C
Sbjct: 180 TDYFDPKEFLPAIGQGALGIEALKNGEY-NNYLKKLDNKEVRIAVEAERSFMKKLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I ++ K LY G GKI + G + + I +G AQ I
Sbjct: 239 SVIGVYSEIKNDDLYMIGT-FDVGGKIIKKD-ILGKKSENIELGFKLAQKILE 289
>gi|121608027|ref|YP_995834.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2]
gi|121552667|gb|ABM56816.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2]
Length = 345
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 101/302 (33%), Positives = 154/302 (50%), Gaps = 8/302 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H++ ++ ++T+GD+I +R+L+++GGKGLF
Sbjct: 8 PIVIATRASRLALWQAGHVQALLQAR----GHSVQLLGMTTRGDQILDRSLSKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KDMP +L G ++ L RED RD ++S +L+ L
Sbjct: 64 VKELEAALAEGRADIAVHSLKDMPMELPAGFALACVLEREDPRDAWVSPQYATLEALPPG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 124 AVVGTSSLRRQALLQALRPDLRMEPLRGNLDTRLRKLDAGQYQAIVLAVAGLKRLGLEAR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ P+ GQGA+ IE + + H+ +W +V ERA + GSC
Sbjct: 184 IRAPFAPAALLPAAGQGALGIEVRSERQDLCAALAALAHQPSWLAVAAERAVSRAMGGSC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFIS 300
+A + G+ L G+ + A +G A+ +
Sbjct: 244 SMPLAAYGQFHGAVLQLDAAWGDPQGQAPLVRAQASATVTTLAQAEALGSALARRLCADG 303
Query: 301 NK 302
+
Sbjct: 304 AR 305
>gi|325690356|gb|EGD32360.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK115]
Length = 306
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 163/302 (53%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVEQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 K---VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + ++L+ + E T V ERA LA+
Sbjct: 180 DQSLLHIQPLETRLCLPAISQGALAVEYREEDEELRKLLATVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA A KG ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|15892629|ref|NP_360343.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7]
gi|20138263|sp|Q92HR5|HEM3_RICCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15619798|gb|AAL03244.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7]
Length = 351
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRMPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFAYC 254
++ IA ++
Sbjct: 243 RTPIAAYSQY 252
>gi|157828627|ref|YP_001494869.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933343|ref|YP_001650132.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa]
gi|189028152|sp|B0BY00|HEM3_RICRO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028153|sp|A8GSI6|HEM3_RICRS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157801108|gb|ABV76361.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908430|gb|ABY72726.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa]
Length = 351
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFAYC 254
++ IA ++
Sbjct: 243 RTPIAAYSQY 252
>gi|313215076|emb|CBY42810.1| unnamed protein product [Oikopleura dioica]
Length = 368
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 101/343 (29%), Positives = 159/343 (46%), Gaps = 47/343 (13%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
G+R S LA+ +S L + P I I + TKGD++ + L++IG K LFT+E+
Sbjct: 6 GSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLFTKEL 63
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------QSLKDLA 122
E L G++ VHS KDMPT L +G+ +S L RE D + +SL L
Sbjct: 64 EVALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSLDQLE 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------NNNKAHAILLAYAGI 176
++IG+SSLRRKA L R + + RG + TRL KL + A++LA AG+
Sbjct: 124 KTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILARAGL 183
Query: 177 KRLKKEK-----VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
+R+ ++ + E L+ + + GQGA+ IET + K EL+ ++HE+T V
Sbjct: 184 ERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETTLRVV 243
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS------------- 277
ER+F+ L+G C + +A + K + G V + DGK +
Sbjct: 244 AERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGKESIIKTENIDLCPAKMPKI 303
Query: 278 ---------RNGNRCD-----AINIGRDAAQYIRFISNKNVFN 306
G A+ +GR+ A+ + +
Sbjct: 304 KYPFDYVGIVRGKIDKSKMYLAMKLGRELAEQLIADGAMKILE 346
>gi|313676857|ref|YP_004054853.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126]
gi|312943555|gb|ADR22745.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126]
Length = 311
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 159/303 (52%), Gaps = 7/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A ++ + H I + TKGD+I + +++IG KG+FT
Sbjct: 3 IRIGTRGSKLALWQAEYVKTRIEKA----GHTAEIKIIQTKGDKILDVAISKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124
EEIE +L G ID AVHSAKDM ++L +G + A+ RE + DV +SH + D
Sbjct: 59 EEIEAQLEDGNIDIAVHSAKDMQSELPQGFDLIAFTEREKVNDVLVSHKDSIDINDKDNP 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
VIGTSS RR A L + I +D RG ++TR+ K+ AILLAYAG+ R++ +
Sbjct: 119 IVIGTSSTRRIATLKHFYPHIKTVDIRGNLQTRIRKMEEGLCDAILLAYAGVHRMEYDDK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
IK L+ ++F P+ GQG++ IE H + K Q L +NH +T + ERA+L L G
Sbjct: 179 IKLELSTQEFIPAVGQGSVAIEVHESIEDDKKQMLRFALNHRNTEYCLRAERAYLRHLQG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + G A +++ +++ DG+ + A +G A+ I
Sbjct: 239 GCSIPVFGLATLNSNSIEMEAGIISLDGQERISMKLTDETSRAEELGTLIARQILKKGGD 298
Query: 303 NVF 305
V
Sbjct: 299 KVL 301
>gi|227508197|ref|ZP_03938246.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227192426|gb|EEI72493.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 303
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F +GTR S LA+ +L + + P + ++T+GDR +L +IGGKG
Sbjct: 2 KPEFVVGTRQSKLAMRQTNLVVDALKE--RFPKIIFKVEKITTQGDRNRKDSLRKIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDL 121
+F +EIE++L ID AVHS KD+ L K L I R+ D IS + L
Sbjct: 60 IFVKEIEQRLTDKRIDFAVHSLKDVMPSLPKNLIIGGVPKRDSPFDCLISTKPFSDIDQL 119
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSS RR+ R D+ ++ RG +++R+ KL + I+LA AG+ RL
Sbjct: 120 PKGARIGTSSSRRQGQFSHLRPDVEIVSIRGNVDSRIQKLQRDHLDGIILAEAGLNRLGV 179
Query: 182 EKVIKEILNIE-DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ L+++ D P+ GQGAI IE ++ L+K I DT SV ER FL L
Sbjct: 180 DLTGLYRLSLKNDLLPAAGQGAIGIECRADDHDTLALLKQIEDADTRQSVTIERDFLRRL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC I FA + F G+V + DGKIF S+ N+G + A +
Sbjct: 240 GGSCNFPIGAFASQTSMGVRFDGLVASIDGKIFFSKSKT--EQTGGNLGEEVADELISEG 297
Query: 301 N 301
Sbjct: 298 A 298
>gi|254196423|ref|ZP_04902847.1| porphobilinogen deaminase [Burkholderia pseudomallei S13]
gi|169653166|gb|EDS85859.1| porphobilinogen deaminase [Burkholderia pseudomallei S13]
Length = 329
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ V +
Sbjct: 311 RAVVD 315
>gi|254778943|ref|YP_003057048.1| porphobilinogen deaminase [Helicobacter pylori B38]
gi|254000854|emb|CAX28786.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Helicobacter
pylori B38]
Length = 306
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175
Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+
Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I A G + ++ +GK + G++ A ++ ++ +
Sbjct: 235 LNGGCQIPIGVHASLMGDGVKIQAVLGLPNGKEVITKEKRGDKTKAFDLIQELLEEFLQS 294
Query: 300 SNKNVFN 306
K +
Sbjct: 295 GAKEILE 301
>gi|307611613|emb|CBX01297.1| porphobilinogen deaminase HemC [Legionella pneumophila 130b]
Length = 284
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 1/277 (0%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89
V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDMP
Sbjct: 3 VKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDMPA 62
Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
+L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ +
Sbjct: 63 QLPDGLSLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQIKT 122
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE
Sbjct: 123 LRGNIHTRLSKLESGEYQAIILAAAGLERMGLTHHITQLIPDDIMLPTCAQGALCIECRT 182
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-LYFYGIVLAS 268
++ + QEL+ +N + V+ ER A+L G+C A + L VL
Sbjct: 183 DDLEIQELIHSLNDPISALCVHTERRVNAKLGGNCHIPFAVYCTITAENLLLLRAKVLNL 242
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
DG + + G +A I + + +
Sbjct: 243 DGSQMIDDEQQGKIEEAEIIADRCTESLMTKGAMTLL 279
>gi|34581586|ref|ZP_00143066.1| porphobilinogen deaminase [Rickettsia sibirica 246]
gi|28262971|gb|EAA26475.1| porphobilinogen deaminase [Rickettsia sibirica 246]
Length = 351
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFAYC 254
++ IA ++
Sbjct: 243 RTPIAAYSQY 252
>gi|330993440|ref|ZP_08317375.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1]
gi|329759470|gb|EGG75979.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1]
Length = 360
Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 164/316 (51%), Gaps = 15/316 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62
P ++GTR SPLAL + L + +ST GD++ NR L EIGGKG
Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQISTTGDQVQNRKLAEIGGKG 100
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120
LF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I D
Sbjct: 101 LFAKEIHEALLDGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDVLILGPGCGEPDPA 160
Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L +++G +S+RR+A +L R D+ RG ++TRL+KL + A LLAYAG
Sbjct: 161 DPYSVLPQGALVGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAARQCDATLLAYAG 220
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
++RL E IL+ P+ GQG + + ++ + +EL+ I + ERA
Sbjct: 221 LRRLGMEDRADVILDPTIMVPAAGQGIVGVTVRESDVELRELLSAIEDYEARAVATAERA 280
Query: 236 FLAELDGSCKSAIAGFAY----CKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LAELDGSC++ I G+A G L+ G+V DG + S +G DA +G
Sbjct: 281 LLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPADAARLG 340
Query: 290 RDAAQYIRFISNKNVF 305
RD + +R S ++F
Sbjct: 341 RDLGRSLRADSPADIF 356
>gi|320006816|gb|ADW01666.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331]
Length = 311
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PDTVTEVVPVRTTGDKWLGD-LSKVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L+ L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLEQLPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA AG+ R+ +
Sbjct: 124 GTRIGTSSVRRTAQLASSHPHLDCVPFRGNANRRLAKLAAGEADALLLAVAGLHRIGRPD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI +IL E P G G + ++ ++ E V +NH T+ + ER FL L G
Sbjct: 184 VISDILAPETMCPPIGAGVLALQCREDDTATIEAVGALNHPGTYREITAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V DGK D +G A + +
Sbjct: 244 CNSPIAGYATAHRNGDLSLRACVFTPDGKTVLNAHEWAGPLDPATLGTSVAVSLLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 ELID 307
>gi|110636914|ref|YP_677121.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406]
gi|123163848|sp|Q11XT5|HEM3_CYTH3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110279595|gb|ABG57781.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406]
Length = 312
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 162/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LAL A + L P I+ + T GD+I +++L++IG KG
Sbjct: 2 NKTVRIGTRGSKLALWQAEHVAACLQTKGLEP----QIVIIDTTGDKILDQSLSKIGSKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFTEE+E++L +G ID AVHSAKD+ T L G+ I A RE + DV +SH
Sbjct: 58 LFTEELEEQLHAGTIDIAVHSAKDLQTHLKGGMYILAITERELVNDVLVSHKPIDTLKNN 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+IGTSS RR+ALL ++ ++D RG ++TR+ K+ A+LLAYAG+ R+ +
Sbjct: 118 PDLIIGTSSTRRRALLRKFYPQAKMVDMRGNLQTRIRKMEEGACDAMLLAYAGMHRMGYD 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+IKE L++E+F P+ GQG + IE + KA + V+N T +V+ ERAFL L
Sbjct: 178 SLIKEKLSLEEFIPAAGQGTLAIEAASTLDKEKAAVIRAVLNDAATETAVSAERAFLRTL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + A + + G +++ DG + DA G + A +
Sbjct: 238 EGGCSIPVFALAVERDTDYLLTGGIVSLDGTKYLRKEIRFTAADAEQRGVELATVLLKDG 297
Query: 301 NKNVF 305
+
Sbjct: 298 ADEIL 302
>gi|57239097|ref|YP_180233.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|58579044|ref|YP_197256.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|57161176|emb|CAH58090.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|58417670|emb|CAI26874.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
Length = 299
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 113/300 (37%), Positives = 168/300 (56%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR S LA+A A E + L + P N+ I+ + T GD +L+EIGG
Sbjct: 1 MNSMNVYVGTRGSILAIAQAMEVKKLL--YNYFPDINVQIVHIVTSGDINDKISLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+
Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+
Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ +
Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+GSC + +A A Y TLY ++ + +F N CDA G + +
Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNEEKTVF--SDCYFNECDAEISGINMGNDLMDQ 296
>gi|153953354|ref|YP_001394119.1| porphobilinogen deaminase [Clostridium kluyveri DSM 555]
gi|146346235|gb|EDK32771.1| HemC [Clostridium kluyveri DSM 555]
Length = 305
Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats.
Identities = 111/291 (38%), Positives = 153/291 (52%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FRI TR S LAL L K + + T+GDR + +L +IGGKG+F
Sbjct: 18 FRIATRKSKLALVQTDYVIDLLALKFK---MQCEKVLIRTEGDRKLDVSLDKIGGKGVFV 74
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL +
Sbjct: 75 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 134
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I
Sbjct: 135 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 194
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E N +F P+ GQGAI +E N+ A + I++ED V ER+FL +L G C
Sbjct: 195 TEYFNPFEFIPAVGQGAIGVEILKNSEYAST-LGKIDNEDIRMGVEAERSFLKKLQGDCH 253
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + ++ +G L GI G + G++ D I +G + I
Sbjct: 254 TPVGAYSVIEGEILNITGIFQV--GNKLIKKDVCGDKWDYIALGESLGEKI 302
>gi|313227065|emb|CBY22212.1| unnamed protein product [Oikopleura dioica]
Length = 382
Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 101/343 (29%), Positives = 160/343 (46%), Gaps = 47/343 (13%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
G+R S LA+ +S L + P I I + TKGD++ + L++IG K LFT+E+
Sbjct: 6 GSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLFTKEL 63
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------QSLKDLA 122
E L G++ VHS KDMPT L +G+ +S L RE D + +SL L
Sbjct: 64 EIALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSLDQLE 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------NNNKAHAILLAYAGI 176
++IG+SSLRRKA L R + + RG + TRL KL + A++LA AG+
Sbjct: 124 KTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILARAGL 183
Query: 177 KRLKKEK-----VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
+R+ ++ + E L+ + + GQGA+ IET + K EL+ ++HE+T V
Sbjct: 184 ERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETTLRVV 243
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS------------- 277
ER+F+ L+G C + +A + K + G V + DGK +
Sbjct: 244 AERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGKESIIKTENIDLCPAKMPKI 303
Query: 278 ---------RNGNRCD-----AINIGRDAAQYIRFISNKNVFN 306
G A+ +GR+ A+++ +
Sbjct: 304 KYPFDYVGIVRGKIDKSKMYLAMKLGRELAEHLIADGAMKILE 346
>gi|119714759|ref|YP_921724.1| porphobilinogen deaminase [Nocardioides sp. JS614]
gi|119535420|gb|ABL80037.1| hydroxymethylbilane synthase [Nocardioides sp. JS614]
Length = 314
Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 9/303 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKG 62
P R+GTR S LA + L + + ++ +ST+GDR L G
Sbjct: 4 PLRVGTRASVLATTQSGLVADQLREAL---GREVELVTVSTEGDRTQAAGIPLQGGSATG 60
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ GE+D AVHS KD+PT +G+ ++A RED RDV ++ +L +L
Sbjct: 61 VFVAALRDALLRGEVDVAVHSLKDLPTYPTEGITLAAVPVREDPRDVVVARDGLTLGELP 120
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ S +GT S RR A L + V+ RG ++TR+ K+ + + A++LA AG+ R+ +
Sbjct: 121 VGSRVGTGSPRRVAQLHALGLGLEVVGIRGNVDTRIGKVRSGECDAVILARAGLARIGRL 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + E+L+ P+PGQGA+ +E ++P A ++ ++ +V ERA LA L+G
Sbjct: 181 EAVTEVLDPLQMLPAPGQGALAVECRTDDPLAAQVAAALDDPRVRAAVTAERAVLATLEG 240
Query: 243 SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + I A G L+ + L+ DG + S +G+ DA +G + +
Sbjct: 241 GCSAPIGALAEIVEGEDGDELWVRSVALSPDGALSVRRSASGSPSDAAGVGTRLGEQMLA 300
Query: 299 ISN 301
Sbjct: 301 DGA 303
>gi|312137417|ref|YP_004004754.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088]
gi|311225136|gb|ADP77992.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088]
Length = 289
Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR SPLAL + + L + + I + T GD+I + L +IG +G+FT
Sbjct: 1 MIVGTRGSPLALKQTYYVVNQLSKLV---NEEVKIKIIKTTGDKIKDSQLHKIGQRGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+K +++ E+D AVHS KD+PT+L + L+I A R+ +V +S S +L+
Sbjct: 58 KEIDKAVLNEEVDLAVHSLKDVPTELHEDLEIVAIPHRDSPNEVLVSK--YSWDELSEEC 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRRKA + RG IETR+ K+ + + A ++A A +KRL EK I
Sbjct: 116 ILGTSSLRRKAFCRYHGKKFKIKPLRGNIETRIKKVEDGEYDATIMAEAALKRLNLEKYI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K+ +++ F PS GQGAI IET ++ ++K +N + V ER L EL C+
Sbjct: 176 KKRFSVKYFTPSAGQGAIAIETRSDSKYI-SVLKKLNDHRAFYEVTAERTVLKELGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I A KG L Y I+L+ GK+ ++ +G +A +G+ AA+ +
Sbjct: 235 WPIGVVARSKGKNLNLYAILLSKKGKLLSKIELDGKLHEATKLGKKAAKKM 285
>gi|307293495|ref|ZP_07573339.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1]
gi|306879646|gb|EFN10863.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1]
Length = 308
Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 123/297 (41%), Positives = 165/297 (55%), Gaps = 8/297 (2%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L EI
Sbjct: 1 MQKPFRPLRLGTRGSPLALAQAHMTIAALRARHGWDEGAVEIVVVQTSGDRIQDRALAEI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGK L+T+E+++ L+ GEID AVHS KD+ T ++I+A LPR D+RD + A S
Sbjct: 61 GGKALWTKELDRALLEGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLVG--AASF 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L V+GTSS RR A + R R D V+ FRG + TRL KL +AHA LLA AG+ R
Sbjct: 119 DALPEKPVVGTSSPRRAAQVKRLRPDAGVVLFRGNVATRLAKLEKGEAHATLLAAAGLDR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + V + E P+P QGA+ IET N +L+ IN DT+D V ERA L
Sbjct: 179 LGQSDVGVA-IPAEVMLPAPSQGAVGIETLSGNGAMLDLLATINDADTFDCVMAERAVLV 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDA 292
L G+C S IA + +Y +++ DG+ S R D A +GR
Sbjct: 238 GLGGTCHSPIAALGRLEEGRIYLRAEIISPDGQETIGDSLRIERNDVATAEAMGRGL 294
>gi|315047640|ref|XP_003173195.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311343581|gb|EFR02784.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 342
Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 25/325 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A + L + P H I L T GD+ N L G K L+
Sbjct: 10 PLRIGTRRSNLAIVQAKGVQDQLQKI--APDHTFEIEALHTLGDKDQNSALYNFGAKNLW 67
Query: 65 TEEIEKKLISGEIDCAVHSAK-------DMPTKLLKGLQISAYLPREDIRDVFISH---T 114
T E+E+ L SG++D VH K DMPT L ++A R+D RD I
Sbjct: 68 TTELEELLTSGKLDVIVHCLKGECSKNSDMPTNLPDSCDLAAIPLRDDPRDALIVKAGLP 127
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLA 172
SL+ L ++IGTSS+RR A L R + + RG +ETRL KL++ ++ I+++
Sbjct: 128 YTSLQTLPEGAIIGTSSVRRSAQLHRLFPSLRFTNIRGNVETRLAKLDDPQSEYTCIVMS 187
Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G++R+ I + L +D + GQGA+ +E + K L+ + + +
Sbjct: 188 ACGLERIGLGYRISQRLGSKDGGILHAIGQGALGLEVRKGDTKILHLLDQLVDHKSSLAC 247
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGST------LYFYGIVLASDGKIFHEVSRNG---N 281
ERA + L+G C I L IV++ DG E S N
Sbjct: 248 LAERALMRTLEGGCSVPIGVETEWLDEGEAADPILEMRAIVVSLDGSQCVEDSINAAVHT 307
Query: 282 RCDAINIGRDAAQYIRFISNKNVFN 306
+ +A +G++ A + +
Sbjct: 308 KDEATVLGQELAARMLKAGAATILE 332
>gi|254181386|ref|ZP_04887983.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655]
gi|184211924|gb|EDU08967.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655]
Length = 329
Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAALMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|219853983|ref|YP_002471105.1| hypothetical protein CKR_0640 [Clostridium kluyveri NBRC 12016]
gi|254800246|sp|B9DZL6|HEM3_CLOK1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219567707|dbj|BAH05691.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 290
Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 111/291 (38%), Positives = 153/291 (52%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FRI TR S LAL L K + + T+GDR + +L +IGGKG+F
Sbjct: 3 FRIATRKSKLALVQTDYVIDLLALKFK---MQCEKVLIRTEGDRKLDVSLDKIGGKGVFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL +
Sbjct: 60 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I
Sbjct: 120 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E N +F P+ GQGAI +E N+ A + I++ED V ER+FL +L G C
Sbjct: 180 TEYFNPFEFIPAVGQGAIGVEILKNSEYAST-LGKIDNEDIRMGVEAERSFLKKLQGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + ++ +G L GI G + G++ D I +G + I
Sbjct: 239 TPVGAYSVIEGEILNITGIFQV--GNKLIKKDVCGDKWDYIALGESLGEKI 287
>gi|16124327|ref|NP_418891.1| porphobilinogen deaminase [Caulobacter crescentus CB15]
gi|221233009|ref|YP_002515445.1| porphobilinogen deaminase [Caulobacter crescentus NA1000]
gi|24211766|sp|Q9ABZ8|HEM3_CAUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800240|sp|B8GXG1|HEM3_CAUCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|13421169|gb|AAK22059.1| porphobilinogen deaminase [Caulobacter crescentus CB15]
gi|220962181|gb|ACL93537.1| porphobilinogen deaminase [Caulobacter crescentus NA1000]
Length = 322
Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 121/320 (37%), Positives = 173/320 (54%), Gaps = 16/320 (5%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIV----IIPLSTKGDRIT 51
M ++P RIG R S L+LA + ++ + +P I +IP+ T GDRI
Sbjct: 1 MSRQPPIRIGARGSKLSLAQSGLMQARIAHALGVPAGASKDEIEAAAPLIPIVTSGDRIQ 60
Query: 52 NRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111
+R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FI
Sbjct: 61 DRRLMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFI 120
Query: 112 SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171
SH + L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILL
Sbjct: 121 SHVCERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILL 180
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A +G+ RL + + L+ + PP+PGQGA+ IET + A ++ + T +V
Sbjct: 181 AQSGLNRLGLGHLTRSWLDPDACPPAPGQGALVIETRAEDIGA-PWLEAVRCRQTTIAVA 239
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE----VSRNG--NRCDA 285
ER L L+GSC++AI A G+ L L DG ++ G + +A
Sbjct: 240 AERGALLALEGSCRTAIGARAILDGARLSMIVEALTPDGAQRFRREGDITLTGADDIAEA 299
Query: 286 INIGRDAAQYIRFISNKNVF 305
G +R +
Sbjct: 300 RAFGLTLGAEVRAAGGDAII 319
>gi|326201521|ref|ZP_08191392.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782]
gi|325988121|gb|EGD48946.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782]
Length = 297
Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats.
Identities = 88/293 (30%), Positives = 155/293 (52%), Gaps = 7/293 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKGL
Sbjct: 6 KKIRIGSRDSKLAIIQSEMVMAAIREF--DPDIELELITMKTTGDKILDKTLDKIGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L + E+D VHS KDMP + L + A RED RD F+ ++ ++
Sbjct: 64 FVKELDYALYNNEVDITVHSYKDMPLEDNPELPVVAVSKREDPRDAFVLPQGENTEN--- 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 121 NEPIGSSSQRRQLQLKALFPNHKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++++ P+ QG I ++ + + +K+ + E++ + ER F+ E++G
Sbjct: 181 RISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISHAERTFVREMNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + IA +A S + G+ + +G+R + + +G + + +
Sbjct: 239 CSTPIAAYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKM 291
>gi|309775730|ref|ZP_07670726.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916493|gb|EFP62237.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53]
Length = 299
Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats.
Identities = 112/299 (37%), Positives = 157/299 (52%), Gaps = 3/299 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LALA E R L + + P H + +STKGDR + L ++ KG+F
Sbjct: 3 IRMGTRGSALALAQCKEVRDRLQEAY--PQHTFELCVISTKGDRNQHVALDQMKDKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++L+ G ID AVHS KDMP+ L L + L RED RDV + TA +L+ L H+
Sbjct: 61 KEIEQQLLEGTIDLAVHSMKDMPSTLDARLCFTKTLLREDARDVLVLRTAPTLEQLPPHA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I T S RR LLR R+D+ ++ RG IETRL KL + I+LA AG+KRLK + I
Sbjct: 121 RIATGSKRRSYQLLRQRNDLEIVGIRGNIETRLRKLEEQQLDGIVLAAAGLKRLKLKPYI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ QGA+ IE +LV + + V ERAFL EL+G C
Sbjct: 181 TQTLKECIMVPAVAQGALAIEVCKEREDLIQLVNALCDPALDEEVCAERAFLQELNGGCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI-SNKN 303
+ + +T+ Y + DG ++ +G R A+ + AA +R K
Sbjct: 241 TPLGARCILHDTTVELYAVYGNEDGTRLKQLHVSGAREQAVELAIQAAAVLREQVGGKQ 299
>gi|302549045|ref|ZP_07301387.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
gi|302466663|gb|EFL29756.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
Length = 311
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRTELAAAH--PGVRTEVVPVKTTGDKWMGD-LSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDIRDALIHPDGLTLDELPA 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++
Sbjct: 124 GTRIGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLAAKEADALLLAVAGLERIGRQD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI EIL+ E P G G + ++ ++ + V + DT+ ER FL L G
Sbjct: 184 VISEILSTETMMPPIGAGVLALQCREDDADLIDAVSGLGDPDTYRETMAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAGFA+ L V DGK R D +G A + +
Sbjct: 244 CNSPIAGFAHVDRSGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 EIID 307
>gi|217033471|ref|ZP_03438901.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10]
gi|216944176|gb|EEC23604.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10]
Length = 306
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFTT-LQKLNDEESAFCCHLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|167918037|ref|ZP_02505128.1| porphobilinogen deaminase [Burkholderia pseudomallei BCC215]
Length = 276
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 153/266 (57%), Gaps = 2/266 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
+ +A A +G L+ G V +DG
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDG 276
>gi|317123819|ref|YP_004097931.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043]
gi|315587907|gb|ADU47204.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043]
Length = 316
Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 152/303 (50%), Gaps = 9/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L H++ ++ ++T+GD ++ LT IGG G+F
Sbjct: 4 LRLGTRRSALATTQSGWVADQLRAA----GHDVELVEITTEGD-VSGGLLTAIGGTGVFA 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I K L G +D AVHS KD+PT GL ++A RED RDV ++ +L +L + S
Sbjct: 59 AAIRKALTDGRVDVAVHSLKDLPTAPEPGLVVAAVPAREDSRDVLVARDGLTLGELPIGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT S RR A L + + RG ++TRL +++ + A++LA AG+ RL + V+
Sbjct: 119 VVGTGSPRRTAQLAALGLGLEIRPIRGNVDTRLRLVSSGEVDAVILARAGLARLGRLDVV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ P+PGQGA+ +E + P E V V+ DT S+ ERA LA L+ C
Sbjct: 179 TEVLDPIQVLPAPGQGALAVECRADRPDVLEAVSVLEDADTRASITAERALLAALEAGCT 238
Query: 246 SAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ + A L DG+I S G D ++GR AQ +
Sbjct: 239 APVGALAEVVDGEEGLELSLRAFAGTEDGRIDLRRSLTGRYDDPESLGRRLAQILLEDGA 298
Query: 302 KNV 304
++
Sbjct: 299 ADL 301
>gi|283798144|ref|ZP_06347297.1| hydroxymethylbilane synthase [Clostridium sp. M62/1]
gi|291074124|gb|EFE11488.1| hydroxymethylbilane synthase [Clostridium sp. M62/1]
gi|295091711|emb|CBK77818.1| hydroxymethylbilane synthase [Clostridium cf. saccharolyticum K10]
Length = 298
Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 151/303 (49%), Gaps = 7/303 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK R+G+R S LA+ A ++ P + ++ + T GDRI N++L +IGG
Sbjct: 1 MNKK-VRVGSRDSLLAVRQAELVMEAVRKA--SPETELTLVTMKTTGDRILNQSLDKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E++ L+ G D +VHS KDMP ++ + L I AY PRED RDV + L +
Sbjct: 58 KGLFVKELDLALMEGRSDLSVHSLKDMPMEIPEELPILAYSPREDNRDVLVLREG--LSE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L H VIGT S RRK R D RG I TRL KL++ + A++LA AG+ R+
Sbjct: 116 LPAHPVIGTGSARRKIQAARIYPDAEFKGIRGNIHTRLRKLDSGEYDALILAAAGMIRMG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++E+ P GQG + ++ ++ + IN + ER+F+ L
Sbjct: 176 LQDRISRYFSVEEIIPPAGQGIMAVQGRKDDSY--PFLIKINSPKSQAMAEAERSFVKTL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C S IA A +G L G+ + S G+ +GR A ++
Sbjct: 234 DGGCSSPIAACALIEGDRLKLRGLYFEEKSGRWVVGSLEGSVQGPAELGRSLALRLKSEI 293
Query: 301 NKN 303
+
Sbjct: 294 EQE 296
>gi|224372609|ref|YP_002606981.1| porphobilinogen deaminase [Nautilia profundicola AmH]
gi|223588468|gb|ACM92204.1| porphobilinogen deaminase [Nautilia profundicola AmH]
Length = 291
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 162/295 (54%), Gaps = 11/295 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL A +S L + H I + ++T GD+I ++ L EIGGKGLF
Sbjct: 2 KLTIATRGSKLALWQAEWVKSKLEKL----GHEIDLKIVTTTGDKILDKPLAEIGGKGLF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKL-LKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E+E+ L+ G+ AVHS KD PT+ ++A RE + DVF+S ++L +L
Sbjct: 58 IKEVEEALLKGDAQIAVHSLKDFPTQYETDHFTLAAIPVREAVEDVFLSENFETLAELPH 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++V+GTSS+RR L +R D+ + D RG ++TR+NKL + K AI+LA+AG+KRL K
Sbjct: 118 NAVVGTSSIRRAMQLKAFRDDLVITDLRGNVDTRINKLKDGKYDAIILAHAGVKRLGLLK 177
Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+L+ + P+ GQGA+ IET +N+PK E VK +N T V ER F+ L+
Sbjct: 178 SVKYFEVLDTDIMIPAMGQGALGIET-INDPKVIEAVKPLNDFRTQICVTIERDFVDTLN 236
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
C + + +A ++ +L D + + + N G++ A+
Sbjct: 237 LGCHAPVGVYAKIMADDSIKIKAALLKDD--KMIKKEVVISFDEWENAGKEFAKE 289
>gi|322389389|ref|ZP_08062943.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903]
gi|321143877|gb|EFX39301.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903]
Length = 307
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 86/303 (28%), Positives = 155/303 (51%), Gaps = 10/303 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++GTR S LA+ L + H P + ++P T+GDR+ + +L IGGKG+
Sbjct: 2 RSIKVGTRKSQLAMTQTKMVVERLKECH--PEVDFELVPYKTQGDRLVHVSLQTIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLA 122
F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I +L L
Sbjct: 60 FVKEIEQALLNKDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIFREEGMTLATLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+
Sbjct: 120 QGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGYL 179
Query: 183 K----VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E L+ + F P+ QGA+ +E ++ + E++ I+ ++ + + ER+FL+
Sbjct: 180 DQSPSLNLEFLDPQTFIPAVSQGALAVECREDDEEVLEILASIHDKEVENCIQLERSFLS 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
++ C + A + ++ + + + + + D + + +
Sbjct: 240 LMNADCTFPVGAHAQYIDGHYHLETMLADAKDRCLYVALTSKDGSDLPKLAL---EQLME 296
Query: 299 ISN 301
Sbjct: 297 KGA 299
>gi|294010302|ref|YP_003543762.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S]
gi|292673632|dbj|BAI95150.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S]
Length = 308
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 118/297 (39%), Positives = 168/297 (56%), Gaps = 8/297 (2%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L +I
Sbjct: 1 MQKPSRPLRLGTRGSPLALAQAHMTVAALRARHGWDEGAVEIVVVQTSGDRIQDRALADI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGK L+T+E+++ L SGEID AVHS KD+ T ++I+A LPR D+RD + A
Sbjct: 61 GGKALWTKELDRALASGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLVG--ADDF 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L V+GTSS RR A + R R D V+ FRG + TRL +L+ +AHA LLA AG+ R
Sbjct: 119 AALPERPVVGTSSPRRAAQVRRLRPDAQVVLFRGNVATRLARLDRGEAHATLLAAAGLDR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + V + ++ P+P QGA+ IET + +L+ I+ DT+D V ERA LA
Sbjct: 179 LGQGDVGVA-IPVDVMLPAPSQGAVGIETLSGDEAMLDLLAAISDADTFDCVMAERAVLA 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRDA 292
L G+C S IA FA + + +++ DG+ + G+ A +GR
Sbjct: 238 GLGGTCHSPIAAFARLEDGQVRLRAEIISPDGRETVGETARIERGDAAAAEAMGRGL 294
>gi|331230279|ref|XP_003327804.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309306794|gb|EFP83385.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 461
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 99/336 (29%), Positives = 145/336 (43%), Gaps = 35/336 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LAL A + I +ST GD + L +GGK ++T
Sbjct: 67 LIIGTRNSKLALVQAESVEREINKRFSSDQIKTEIKSMSTSGDENLLKPLYLLGGKSVWT 126
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122
+E+E L++G ID VHS KD+PT L G ++++ + RED RD I +L L
Sbjct: 127 KELEFNLLNGSIDLIVHSLKDVPTSLPAGCELASVMLREDPRDALIIRNGLPFTNLSQLP 186
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180
S+IGTSS+RR A L R +++ D RG ++TR KL+ ++ I+LA AG+KR+
Sbjct: 187 AGSIIGTSSVRRVAQLRRRFPNLAFQDIRGNLQTRFKKLDASDSPYTGIILAVAGLKRIG 246
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIET-----------------HVNNPKAQELVKVINH 223
+ I L D + GQGAI IE + LVK +
Sbjct: 247 LAERITSYLEPPDLYHAVGQGAIGIEIRTPPEIKLNETVEETILRERATTVRRLVKSLED 306
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIF 273
T S ERA L L+G C + + + L G+V + DG
Sbjct: 307 WRTALSCEAERALLRRLEGGCSVPVGVTSSLVDLPMPCPWAPKARLTLTGVVTSVDGLEE 366
Query: 274 HEVSRNGNRC---DAINIGRDAAQYIRFISNKNVFN 306
+ C DA ++G A + + +
Sbjct: 367 VRKEAWLDVCGPKDAAHLGTALADELFRDGADKILD 402
>gi|320010120|gb|ADW04970.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331]
Length = 328
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 17/316 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P R+GTR S LA+A + ++ +V + ++ ++T GD I+ L +IGG
Sbjct: 11 TTTPLRLGTRRSKLAMAQSGMVADAVREVT---GRAVELVEITTYGD-ISREHLAQIGGT 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + + L+SGE+D AVHS KD+PT +GL ++A PRED RD ++ + L
Sbjct: 67 GVFVAALREALLSGEVDFAVHSLKDLPTTQPEGLVLAAVPPREDPRDALVARDGLTFGQL 126
Query: 122 ALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ IGT S RR A L DI + RG ++TR+ + + + A++LA AG+
Sbjct: 127 PAGARIGTGSPRRMAQLNAYARSHGLDIETVAIRGNVDTRIGFVRSGELDAVVLAAAGLS 186
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + + + L ++ P+PGQGA+ +E ++ + ++ T +V ERA L
Sbjct: 187 RLGRTDEVTDFLPVDTVLPAPGQGALAVECAESSADLAAALAELDDPYTRIAVTAERALL 246
Query: 238 AELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINI 288
L+ C + + A +G + L G+V ++DG ++S G DA +
Sbjct: 247 NALEAGCSAPVGALADLLAEGQVVNELRLRGVVGSTDGTSLVQLSITGPVPTSHDDAAAL 306
Query: 289 GRDAAQYIRFISNKNV 304
GR+ A + +
Sbjct: 307 GRELAAEMLAKGAAGL 322
>gi|225012137|ref|ZP_03702574.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A]
gi|225003692|gb|EEG41665.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A]
Length = 300
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 151/299 (50%), Gaps = 8/299 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A E ++ L + ++ + + GD+ N+ L +G +G+FT
Sbjct: 2 VRIGTRKSKLALWQANEVKAILES----EGYPCCLVHIESNGDQDLNQPLYAMGIQGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ ++ L++ +ID AVHS KD+PT L KG+ I A L R + DV + + A +
Sbjct: 58 KTLDTALLNEKIDIAVHSLKDVPTLLPKGINIKAVLSRGNPMDVLVYNPA--FMGWETEA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT SLRRKA LR V + RG ++ R+ KLNN+ + A AG+ RL +
Sbjct: 116 SIGTGSLRRKAQWLRKNPKHQVENLRGNLQKRIEKLNNSNWSGAIFAQAGLDRLNLLQDN 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L E P+P QG I I + N + ++ IN +T ER+FL L+G C
Sbjct: 176 YEVL--EWMIPAPSQGIIGIASLEKNKELNAVLDKINCAETSLCAQIERSFLNTLEGGCT 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I AYC +TLYF G + + DG I N + G AAQ I K +
Sbjct: 234 APIGAHAYCIENTLYFKGGLFSLDGTIAIVHEENTPLENTKEYGVKAAQKILNEGGKEL 292
>gi|102139876|gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 328
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 160/301 (53%), Gaps = 32/301 (10%)
Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
R S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI
Sbjct: 54 RDSDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEI 113
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+ G ID AVHS KD+PT L +G + LP
Sbjct: 114 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLP-------------------------- 147
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
+SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + I
Sbjct: 148 -ASLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSI 206
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ I
Sbjct: 207 LSMEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPI 266
Query: 249 AGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVF 305
A +A+ + F G++ + DG +E +R G D + +G+DA ++ + +
Sbjct: 267 AAYAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFY 326
Query: 306 N 306
+
Sbjct: 327 D 327
>gi|302559228|ref|ZP_07311570.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
gi|302476846|gb|EFL39939.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
Length = 319
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ V P + ++ ++T GD ++ L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVSQVTGRP---VELVEITTYGD-VSREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L GE+D AVHS KD+PT L ++A RED RDV ++ A L D
Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELVVAAIPVREDPRDVVVARDALKLTD 116
Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L D + RG ++TR+ + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARSHGMDFETVPIRGNVDTRIGYVTKGDLDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+
Sbjct: 177 NRVGRSEDVTDFLSVDTVLPAPGQGALAIECTADNAALIAELAELDDPLTRAAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD----AIN 287
LA L+ C + + A + G+V +DG ++S G + A+
Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAAMA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+GR+ A + +
Sbjct: 297 LGRELATGMLAQGAAGL 313
>gi|167910007|ref|ZP_02497098.1| porphobilinogen deaminase [Burkholderia pseudomallei 112]
Length = 278
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 153/266 (57%), Gaps = 2/266 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
+ +A A +G L+ G V +DG
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDG 276
>gi|21221749|ref|NP_627528.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289770973|ref|ZP_06530351.1| porphobilinogen deaminase [Streptomyces lividans TK24]
gi|11386858|sp|Q9WX16|HEM31_STRCO RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName:
Full=Hydroxymethylbilane synthase 1; Short=HMBS 1;
AltName: Full=Pre-uroporphyrinogen synthase 1
gi|5123663|emb|CAB45352.1| putative porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289701172|gb|EFD68601.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 319
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ V P + ++ ++T GD + L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGDT-SREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ A+ L D
Sbjct: 57 TGVFVAALRDALLRGEVDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLTD 116
Query: 121 LALHSVIGTSSLRRKALLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT + RR A L + +I + RG ++TR+ + + + A++LA AG+
Sbjct: 117 LPRGARVGTGAPRRMAQLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+
Sbjct: 177 NRVGRIDEVTDFLSVDTVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD----AIN 287
LA L+ C + + A + G+V +DG ++S G + A+
Sbjct: 237 LAALEAGCSAPVGALADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAALA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+G + A + +
Sbjct: 297 LGGELAAEMLAQGAAGL 313
>gi|226228000|ref|YP_002762106.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27]
gi|226091191|dbj|BAH39636.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27]
Length = 309
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 109/310 (35%), Positives = 160/310 (51%), Gaps = 10/310 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RIGTR S LAL A + + L D +P ++ +T GDRI +R L+ IG
Sbjct: 1 MMTVPVRIGTRSSELALRQARQVAAQL-DARGVPS---ELVEYTTLGDRILDRPLSAIGE 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT E+E L++G IDCAVHS KD+PT +G+ + A L RED RD + S
Sbjct: 57 KGLFTAELEADLLAGRIDCAVHSLKDLPTADPQGIIVVALLEREDPRDALVVRAGVDAHS 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L + +GTSSLRR+A L RSD+ V + RG + TRL KL+ + A LLA AG+
Sbjct: 117 LDTLPEGARVGTSSLRRRAQLQALRSDLEVCELRGNVGTRLRKLDEGQVDAALLAAAGLH 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L+ ++ +PGQGAI ++ ++ + ++H T +V ERA L
Sbjct: 177 RLGLADRIVAYLDAPEWLSAPGQGAIAVQGRADDEALLSTLSSLDHAPTRVAVTAERALL 236
Query: 238 AELDGSCKSAIAGFAYCKGSTL--YFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
A L+G C+ I A + + ++++ DG + + G + A+
Sbjct: 237 AALEGGCQVPIGA-AVLEEPEYGTILHAVIVSLDGSSAVRGGYPVDHANPAASGIELARQ 295
Query: 296 IRFISNKNVF 305
+R +
Sbjct: 296 LRAAGGAQIL 305
>gi|87306341|ref|ZP_01088488.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645]
gi|87290520|gb|EAQ82407.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645]
Length = 308
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 160/304 (52%), Gaps = 7/304 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A L V ++ II ++T+GD +T L IGG+G+FT
Sbjct: 4 IRIGTRGSQLAQWQANWVADQLRAV----GTDVEIIHIATQGD-VTQGPLDLIGGRGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ L+ ID AVHS KD+PT+ + GL+++A R DV I+ A + L S
Sbjct: 59 TEIQAALLDNRIDVAVHSLKDLPTEAVVGLRLAAVPARGADGDVLITSKASDVLGLPQES 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGT S+RRKA LL R D + D RG ++TRL KL++ AI+LA AG++RL+ + I
Sbjct: 119 IIGTGSMRRKAQLLHLRRDFQIRDIRGNLDTRLRKLDDGLYDAIILAEAGLRRLELIERI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ GQGA+ +E + ++ +NHED+ SV ER+ L L G C
Sbjct: 179 RHVIPKAQMLPAVGQGALGLEIRERDSATAAMLAPLNHEDSHYSVLAERSMLRNLRGGCL 238
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ + + L+ G+V++ DG S G A +IGR A + +
Sbjct: 239 APVGAWGRIDPIKQLLFLDGVVVSGDGHHKVTASACGPPNRAEDIGRQVADQLAIQGAER 298
Query: 304 VFNF 307
+ F
Sbjct: 299 LIAF 302
>gi|297190129|ref|ZP_06907527.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC
25486]
gi|197721156|gb|EDY65064.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC
25486]
Length = 311
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+ + GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGIRTEVVPVKTTGDKWMGD-LSLVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+D+RD I +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPGGLTLDELPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL KL A A+LLA +G++R+ +
Sbjct: 124 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLAAGDADALLLAVSGLERIGRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI + L+ + P G G + ++ + + V + H T V ER FL L G
Sbjct: 184 VITQTLSTDVMCPPIGAGVLALQCREGDSALIDTVSDLGHPGTHREVTAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK+ R D +G A + +
Sbjct: 244 CNSPIAGYARSERNGELSLRAKVFSPDGKVILNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 ELID 307
>gi|308063099|gb|ADO04986.1| porphobilinogen deaminase [Helicobacter pylori Sat464]
Length = 306
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ERAF+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLERAFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKNKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|188527044|ref|YP_001909731.1| porphobilinogen deaminase [Helicobacter pylori Shi470]
gi|238058919|sp|B2US69|HEM3_HELPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188143284|gb|ACD47701.1| porphobilinogen deaminase [Helicobacter pylori Shi470]
Length = 306
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ERAF+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLERAFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK R G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKERQGDKTKAFDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|312129517|ref|YP_003996857.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132]
gi|311906063|gb|ADQ16504.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132]
Length = 300
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 163/303 (53%), Gaps = 11/303 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ A +S L I+ + TKGD++ + L++IG KG+F
Sbjct: 2 KIRIGTRVSLLAMWQANYIKSRLEAAGA----ETEIVGMETKGDKVLDVALSKIGSKGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEE+E+KL++GEI AVHSAKDM + L + ++ A+ RE DV ++ A DL+
Sbjct: 58 TEELEEKLLNGEIHIAVHSAKDMQSSLAEDFELIAFTEREYPGDVLVADRAL---DLSAP 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RR A + I +++ RG ++TR+ K+ + + + LAYAG+ R++ +++
Sbjct: 115 ITIGTSSVRRIAFFKKHYPHIKLVNMRGNLQTRIQKMRSGQCDGLALAYAGVHRMEYDEL 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVK-VINHEDTWDSVNCERAFLAELDG 242
I ++ F P GQG + +E N + + VK N E+T+ + ERAFL E++G
Sbjct: 175 IVHRFPLDQFIPPVGQGTVTVEIAKNLDENIKTFVKNTCNDENTYKCLQAERAFLKEMNG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + G A +G + F G + +G + G D I +G+ AA+ +
Sbjct: 235 GCSIPVFGHATLEGEEILFKGGITNLEGTEEVSMEFRGT--DPILLGQHAAEQVLQNGGA 292
Query: 303 NVF 305
+
Sbjct: 293 EIL 295
>gi|58617102|ref|YP_196301.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel]
gi|58416714|emb|CAI27827.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel]
Length = 299
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 112/300 (37%), Positives = 168/300 (56%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR S LA+A A + + L + P N+ I+ + T GD +L+EIGG
Sbjct: 1 MNSMNVYLGTRGSILAIAQAMKVKKLL--YNYFPDINVQIVHIVTSGDINDKISLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+
Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+
Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ +
Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+GSC + +A A Y TLY ++ + +F N CDA G + +
Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNEEKTVF--SDCYFNECDAEISGINMGNDLMDQ 296
>gi|25026992|ref|NP_737046.1| porphobilinogen deaminase [Corynebacterium efficiens YS-314]
gi|259508525|ref|ZP_05751425.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314]
gi|39931582|sp|Q8FSF7|HEM3_COREF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23492272|dbj|BAC17246.1| putative hydroxymethylbilane synthase [Corynebacterium efficiens
YS-314]
gi|259163875|gb|EEW48429.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314]
Length = 299
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 86/305 (28%), Positives = 139/305 (45%), Gaps = 10/305 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R L + + + ++T GD N + E G G+F
Sbjct: 2 TLRIGTRGSKLATTQAGHMRDRLKHFGR----DAELTIVTTPGDV--NMSPVERIGVGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L++ EID AVHS KD+PT R D RD I+ +L++L
Sbjct: 56 TQALRDALVADEIDVAVHSFKDLPTA-PDPRFHLVVPTRADARDALIARDGLTLEELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKALRPDLEILPLRGNIDTRMGKVTSGELDAVVLAFAGLSRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + + P+P QGA+ IE V + + ++ H DT+ + ER L L+ C
Sbjct: 175 ATQVFDPDMLMPAPAQGALAIECRVEDEDIITGLNMLMHADTYVTAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A G T+ V A DG S G + A +
Sbjct: 235 TAPVAAHATLDGYAGDTMTLTAGVFALDGSEQLVFSAQGAGERPEELAEQVAAQLIEQGA 294
Query: 302 KNVFN 306
+
Sbjct: 295 ATLLG 299
>gi|259489684|tpe|CBF90157.1| TPA: hydroxymethylbilane synthase, putative (AFU_orthologue;
AFUA_5G11760) [Aspergillus nidulans FGSC A4]
Length = 347
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 148/319 (46%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F IGTR S LAL ++L + + P + I T GD+ T L + K
Sbjct: 14 SQKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTK 71
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+T+E+E L +G +D VHS KD+PT L + + RED RD + SL
Sbjct: 72 NLWTQELEDLLEAGSVDLIVHSLKDVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNMSL 131
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++LA AG+
Sbjct: 132 AEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAAGL 191
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL I + L+ + + GQGA+ IE + ++++ I H++T + ER
Sbjct: 192 LRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLAER 251
Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
+ L L+G C + + T L +V++ DG EV +G + A
Sbjct: 252 SLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQSAE 311
Query: 287 NIGRDAAQYIRFISNKNVF 305
G A+ + +
Sbjct: 312 EFGVTVAKALVNEGAGKIL 330
>gi|124268186|ref|YP_001022190.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1]
gi|124260961|gb|ABM95955.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1]
Length = 317
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 155/315 (49%), Gaps = 27/315 (8%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
I TR S LAL A R+ L P + ++ ++T+GD+I +RTL+++GGKGLF +E
Sbjct: 10 IATRESRLALWQAEHVRALLGSRLVEP---VELLGMTTRGDQILDRTLSKVGGKGLFVKE 66
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+E L +G+ AVHS KD+P L G ++A L RED RD ++S L L +V+
Sbjct: 67 LETALEAGDAHLAVHSLKDVPMDLPAGFVLAAVLEREDPRDAWVSPRYADLAALPAGAVV 126
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR + L R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 127 GTSSLRRLSQLRARRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLAERIRS 186
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + P+ GQGA+ IE + P+ ++ + HE +W +V+ ERA L GS
Sbjct: 187 VFEADAMIPAAGQGALGIELRADAPERHPALWAALRALTHEPSWLAVHAERAVSRALGGS 246
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAI------------NIGR 290
C +A A + L + + A +G
Sbjct: 247 CSMPLAAHAQWQADGRLVLRAALGSV-------AEAAPALVHAEAGAAVADTAAAEALGL 299
Query: 291 DAAQYIRFISNKNVF 305
AQ +R +
Sbjct: 300 AVAQQLRQRGGDALL 314
>gi|255953953|ref|XP_002567729.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589440|emb|CAP95584.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 339
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 100/320 (31%), Positives = 150/320 (46%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K IGTR S LAL +L P + I T GD T L + K
Sbjct: 7 TQKTITIGTRKSKLALLQTNLVLDALKKA--FPQYEYKIFSKETAGDLNTTIALRDFNTK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+TEE+E+ +I G++D VHS KD+PT L ++ +PRED RDV + +SL
Sbjct: 65 NLWTEELEELMIDGQVDIIVHSLKDVPTTLPSSCKLGPSMPREDSRDVLVVKQGLPYKSL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
++ SV+GTSS+RR A L R + V D RG I TRL+KL+ I+LA AG+
Sbjct: 125 SEIPAGSVVGTSSIRRTAQLARKYPHLKVQDVRGNIGTRLSKLDAEDSPYACIILAAAGL 184
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL I + L+ ++ + GQGA+ IE + +++ I H+DT SV ER
Sbjct: 185 LRLDLADRITQYLDSKNSGMLYAVGQGALGIEIRKEDTVLHDMLDKIGHQDTTFSVLAER 244
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
+ L L+G C + + + L +V++ DGK +V + A
Sbjct: 245 SLLRTLEGGCSAPLGVETGWVQNAQGAKQLRMRSVVVSVDGKECAQVELEADVTSAESAE 304
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G A+ + ++
Sbjct: 305 AFGITVAKALVADGAGDILQ 324
>gi|255534181|ref|YP_003094552.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10]
gi|255340377|gb|ACU06490.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10]
Length = 311
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 157/304 (51%), Gaps = 9/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR SPLAL A E L + H I P+ +KGD+ ++ L +G
Sbjct: 8 SMRSIKIGTRNSPLALWQAREVARHLQNN----NHTTDITPIISKGDKNLSQPLYTLGIT 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT++++ L++ E+D AVHS KD+PT+L + ++I A L R+ +DV + + +L
Sbjct: 64 GIFTKDLDIALLNNEVDIAVHSLKDIPTQLPENVEIIAVLQRDYPQDVLVRKKDAATLEL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
I TSSLRR+A L+ D RG ++TRL KL N A + + A I+R+
Sbjct: 124 HQ-LKIATSSLRRRAFWLKEFPGTEFSDIRGNVQTRLTKLEENDFDATMFSLAAIERMGL 182
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
V E L + P+P QG + + N+P+ +EL K INH +T ++ ER+FL+ L+
Sbjct: 183 S-VDYEHLPL--MIPAPAQGVVAVCARSNDPEIKELFKEINHRETRICIDIERSFLSTLE 239
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C + I FA + F G + + DG+ E + + G+ A+ I
Sbjct: 240 GGCTAPIGAFAEINDLGEVRFTGRICSLDGQNCIETDEIFAWNEHDDFGKILAEKILQNG 299
Query: 301 NKNV 304
+ +
Sbjct: 300 GREL 303
>gi|110801892|ref|YP_698741.1| porphobilinogen deaminase [Clostridium perfringens SM101]
gi|123047375|sp|Q0ST16|HEM3_CLOPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110682393|gb|ABG85763.1| hydroxymethylbilane synthase [Clostridium perfringens SM101]
Length = 291
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + ++++ T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKKKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECL-KDGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ K + LY G + +I + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKIL 288
>gi|296108387|ref|YP_003620088.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy]
gi|295650289|gb|ADG26136.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy]
Length = 284
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 91/277 (32%), Positives = 146/277 (52%), Gaps = 1/277 (0%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89
V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDMP
Sbjct: 3 VKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDMPA 62
Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
+L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ +
Sbjct: 63 QLPDGLLLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQIKT 122
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE
Sbjct: 123 LRGNIHTRLSKLESGEYQAIILAAAGLERMGLAHHITQLIPDDIMLPTCAQGALCIECRT 182
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLAS 268
++ + QEL+ +N + V+ ER A+L G+C A + + L VL
Sbjct: 183 DDLEIQELIHGLNDPISALCVHTERRVNAKLGGNCHIPFAVYCTITEEKRLLLRAKVLNM 242
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
DG + + G +A I + + ++
Sbjct: 243 DGSQMIDDEQQGKIAEAEVIADRCTESLMTKGAMSLL 279
>gi|256783360|ref|ZP_05521791.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 311
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLGD-LSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L
Sbjct: 64 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +
Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + T ER FL L G
Sbjct: 184 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG A L V DGK+ R D +G A + +
Sbjct: 244 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 EIID 307
>gi|148284479|ref|YP_001248569.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong]
gi|167008815|sp|A5CDH4|HEM3_ORITB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146739918|emb|CAM79909.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong]
Length = 298
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 7/293 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LAL A + D+ N +IIP+ T GD I N+ L +IGGKGLF
Sbjct: 2 IIRVGSRASRLALIQAQAVVQKINDLL---GLNAIIIPIKTTGDLIQNKNLYDIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L++ ID AVHS KD+P L GLQ++A L R D+ D+ +S A + DL L
Sbjct: 59 LKEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGDVGDMLVSKIANKITDLPLG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+++GTSS+RR+ LL R D++++ FRG ++TR NK+ NN+ A +LA AG++RL +
Sbjct: 119 AIVGTSSVRRRIQLLMLRPDLNIVLFRGNVDTRWNKIINNEVDATVLAAAGLQRLNYDTS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + P+ GQGAI IE ++ L INH+ TW + ER +L L+
Sbjct: 179 RFCNIIPQSEMLPAIGQGAIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNAD 238
Query: 244 CKSAIAGFAYCKGSTLYFYG--IVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C I G A G+ F ++ + + F G +IG +AA+
Sbjct: 239 CNVPIGGIASYIGNN-SFEAKFMLGDYNMRYFFYSEVRGKLQHGYDIGVEAAK 290
>gi|317177053|dbj|BAJ54842.1| porphobilinogen deaminase [Helicobacter pylori F16]
Length = 306
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SMESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLEREFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|328883227|emb|CCA56466.1| Porphobilinogen deaminase [Streptomyces venezuelae ATCC 10712]
Length = 328
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 89/326 (27%), Positives = 154/326 (47%), Gaps = 26/326 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + ++ + P + ++ ++T GD + L +IGG
Sbjct: 1 MTERALRLGTRRSKLAMAQSGHVADAVRRLTGRP---VELVEITTYGDT-SREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L++ E+D AVHS KD+PT L ++A RED RDV I+ +L
Sbjct: 57 TGVFVAALRDALLADEVDFAVHSLKDLPTAQHPDLVLAAIPEREDPRDVLIARDGLTLDR 116
Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L DI+ + RG ++TR+ + + A++LA AG+
Sbjct: 117 LPEGARVGTGSPRRMAQLHAYARNHGLDITCVPIRGNVDTRVGYVRKGELDAVVLAAAGL 176
Query: 177 KRLK-----KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
R+ + E L ++ P+PGQGA+ +E +N + + ++ T +V
Sbjct: 177 NRIGGTDELLGGLSAEPLPVDTVLPAPGQGALAVECLASNTELVAALAPLDDPLTRAAVT 236
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNR 282
ER+ LA L+ C + + A + G+V +DG ++S G
Sbjct: 237 AERSLLAALEAGCSAPVGALADLLADDPGHGQVVTEMRLRGVVGTTDGSTLVQLSTTGPV 296
Query: 283 ----CDAINIGRDAAQYIRFISNKNV 304
+A+ +GR+ A + +
Sbjct: 297 PTSHDEAMALGRELADEMLAKGAAGL 322
>gi|317179367|dbj|BAJ57155.1| porphobilinogen deaminase [Helicobacter pylori F30]
Length = 306
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLERKFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLTGDRVKIRAVLGLPNGKEVITKEKQGDKTRAFDLIQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|21225618|ref|NP_631397.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289767234|ref|ZP_06526612.1| porphobilinogen deaminase [Streptomyces lividans TK24]
gi|11386841|sp|Q9KY00|HEM32_STRCO RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName:
Full=Hydroxymethylbilane synthase 2; Short=HMBS 2;
AltName: Full=Pre-uroporphyrinogen synthase 2
gi|8246838|emb|CAB92889.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289697433|gb|EFD64862.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 313
Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 9 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLGD-LSQVEGKGAFT 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L
Sbjct: 66 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +
Sbjct: 126 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + T ER FL L G
Sbjct: 186 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 245
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG A L V DGK+ R D +G A + +
Sbjct: 246 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVAVALLRQGAR 305
Query: 303 NVFN 306
+ +
Sbjct: 306 EIID 309
>gi|160879516|ref|YP_001558484.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
gi|160428182|gb|ABX41745.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
Length = 295
Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats.
Identities = 93/294 (31%), Positives = 146/294 (49%), Gaps = 6/294 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LA+ + S+ H +I + T GD I +++L +IGGKGL
Sbjct: 2 RIIRIGSRESELAVRQSRILIDSIKQYHN--EIETELITMKTTGDIILDKSLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ LI G D +VHS KDMP + + L I A+ RED RD + + ++
Sbjct: 60 FVKELDLALIEGRSDLSVHSLKDMPMETPEELPILAFSKREDPRDALVLPLGCT--EIDP 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG SS RR L + + RG + TRL KL+ + A++LA AG+KRL E
Sbjct: 118 VLPIGCSSQRRMLQLKKIYPGANYKGIRGNVLTRLEKLDRGEYGALVLAAAGLKRLGLES 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I I E+ P+ GQG + ++ ++ E +K ++E+ CERAF+ L+G
Sbjct: 178 RISRIFTTEEIIPAAGQGILAVQGRAG--ESYEFLKQFHNEEATFQAVCERAFVKTLNGG 235
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S +A +A + + G+ + + G + DA +G A +R
Sbjct: 236 CSSPVAAYAKVEDEMITVTGLYFDEITGDYITGNLTGKKEDAEQLGEMLANKLR 289
>gi|54027143|ref|YP_121385.1| porphobilinogen deaminase [Nocardia farcinica IFM 10152]
gi|61213309|sp|Q5YP70|HEM3_NOCFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54018651|dbj|BAD60021.1| putative porphobilinogen deaminase [Nocardia farcinica IFM 10152]
Length = 346
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 148/310 (47%), Gaps = 15/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R +L+ + ++ + T GD ++ + +IG G+F
Sbjct: 9 PLRIGTRGSLLAMTQAGTVRDALIAAGRPA----ELVVVKTPGDMSSD-PVQKIG-VGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + +L +G ID AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 63 TSALRDELAAGTIDLAVHSYKDLPTAPDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 122
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR A L + ++ RG +++RL ++ + + A+++A AG+ R+ + V
Sbjct: 123 AKVGTSAPRRVAQLRALGLGLDIVPLRGNLDSRLARVTDGELDAVVVARAGLSRIGRTAV 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L P+P QGA+ +E + E + ++ T +V ERA LAEL+ C
Sbjct: 183 ITEALEPVQMLPAPAQGALAVECRSEDAALIEALAELDDAATRAAVVAERALLAELEAGC 242
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A L G A DG S G+ A +GR A+
Sbjct: 243 TAPVGALAEVVESLDDDGRIVEELSLRGCAAAVDGSEVLRASVVGDPERAAELGRALARE 302
Query: 296 IRFISNKNVF 305
+ + + +
Sbjct: 303 LLELGARELL 312
>gi|261837684|gb|ACX97450.1| porphobilinogen deaminase [Helicobacter pylori 51]
Length = 306
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ERAF+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLERAFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|319946908|ref|ZP_08021142.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641]
gi|319746956|gb|EFV99215.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641]
Length = 307
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 89/303 (29%), Positives = 154/303 (50%), Gaps = 10/303 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ ++GTR S LA+ L + H P ++P T+GDR+ + +L IGGKG+
Sbjct: 2 RSIKVGTRKSQLAMTQTKMMVDRLKECH--PDVEFELVPYKTQGDRLVHVSLQTIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLA 122
F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I +L L
Sbjct: 60 FVKEIEQALLNRDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIYREEGMTLATLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+
Sbjct: 120 QGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGYL 179
Query: 183 K----VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E LN +F P+ QGA+ IE ++ + E++ I+ ++ + + ER FL+
Sbjct: 180 DQSPSLNIEFLNPHEFIPAVSQGALAIECREDDEEVLEILASIHDKEVENCIQLERCFLS 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
++ C + A + ++ + + + D ++ + A + +
Sbjct: 240 LMNADCTFPVGAHAQYIDGHYHLETMLADAKDRCLY---VALTSKDGSDLPKRALEQLME 296
Query: 299 ISN 301
Sbjct: 297 KGA 299
>gi|297379462|gb|ADI34349.1| porphobilinogen deaminase [Helicobacter pylori v225d]
Length = 306
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 155/303 (51%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 120 AKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ERAF+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLERAFVKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ ++ + K
Sbjct: 239 CQIPIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDLVQELLEAFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|261839094|gb|ACX98859.1| porphobilinogen deaminase [Helicobacter pylori 52]
Length = 306
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E ++ ++ +N E + + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEKSAFCCHLEREFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|226305131|ref|YP_002765089.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4]
gi|226184246|dbj|BAH32350.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4]
Length = 324
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 15/312 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ + TKGD+ T+ + +IG G+F
Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIIKTKGDQSTD-PVQKIG-VGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 65 TAELREALLDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E + P+P QGA+ +E N + ++ + T +V ERA LAEL+ C
Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSANVELAAILAEHDDAGTRAAVTAERALLAELEAGC 244
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A L G A DG G A +GR A+
Sbjct: 245 TAPVGAIAEIVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGAPDKAEELGRAVARE 304
Query: 296 IRFISNKNVFNF 307
+ + + + N
Sbjct: 305 LLELGARELMNV 316
>gi|460692|dbj|BAA05861.1| porphobilinogen deaminase [Clostridium josui]
Length = 295
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKGL
Sbjct: 6 KKIRIGSRDSKLAIIQSELIMSAIRKY--DPDIELELITMKTTGDKILDKTLDKIEGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L + E+D VHS KDMP + L + A RED RD FI
Sbjct: 64 FVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFILPQNG-----EN 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 119 GEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G
Sbjct: 179 RIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + IA +A +GS + G+ + +GNR + + +G + + ++
Sbjct: 237 CSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMKS 291
>gi|117927446|ref|YP_871997.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B]
gi|254800230|sp|A0LRF1|HEM3_ACIC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|117647909|gb|ABK52011.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B]
Length = 331
Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 8/305 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A E +L + I+ + + GDR + L E G G+F
Sbjct: 10 LRLGTRRSTLARAQTEEIAGALRAA----GCRVEIVGIQSTGDRHADVPLHEFAGSGVFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+ L+ GE+D VHS KD+PT + L I+A R D RD ++ L +L +
Sbjct: 66 AELRAALLRGEVDVVVHSMKDLPTAEIPELAIAAIPRRADPRDALVTGAGCRLAELPTGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR A L R D+ + RG ++TRL KL+ A+++A AG+ RL + +
Sbjct: 126 IVGTGSPRRAAQLRLLRPDLEIRPIRGNLDTRLGKLHAGGYAALIVAAAGLARLHRSEEA 185
Query: 186 KEILNIEDFPPSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + P+PGQGA+ +E + + ++ ++ T +V ERA LA +
Sbjct: 186 AEFFDPTVMLPAPGQGALAVECRRADIADGGRLAGILAGLDDPATRAAVTAERALLAAVG 245
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + TL +V+ G S G DA ++GR A +
Sbjct: 246 AGCSAPVGALGVVTADTLQLDAVVVDPSGTTAFRRSLTGTPDDASDLGRRLAADLIRAGA 305
Query: 302 KNVFN 306
+
Sbjct: 306 DQLLQ 310
>gi|258651772|ref|YP_003200928.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233]
gi|258554997|gb|ACV77939.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233]
Length = 305
Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats.
Identities = 93/307 (30%), Positives = 150/307 (48%), Gaps = 5/307 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+GTR S LALA + + + + ++ + T+GD T L IGG
Sbjct: 1 MSSRVLRVGTRGSALALAQSGMIADRVARLAGA---TVELVRIRTEGDVNTG-PLATIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ G D VHS KD+PT +G+ ++A RE D + L D
Sbjct: 57 TGVFVTGVREALLDGRADIVVHSYKDLPTAPTEGITVAAVPERESPFDALCARDGLRLDD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GT S RR A LL R D++V+ RG ++TRL +++ A++LA AG+ RL
Sbjct: 117 LPRGSTVGTGSPRRAAQLLARRPDLAVVPIRGNVDTRLRQVSEGHLDAVVLAAAGLNRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L+ + P+P QGA+ +E + E + ++ T +V ER L +
Sbjct: 177 RADAITDVLDADRMLPAPAQGALAVECRSGADTWFTEATRTLDDAPTRAAVVAERVLLRD 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+ C + + FA +G L +V+A DG V R G+ A ++G AA +
Sbjct: 237 LEAGCSAPVGAFAQVQGDALTLRAVVVAVDGSSEFRVHRAGSPAAAADLGARAAADLIGQ 296
Query: 300 SNKNVFN 306
+
Sbjct: 297 GAAGLLG 303
>gi|307187698|gb|EFN72670.1| Porphobilinogen deaminase [Camponotus floridanus]
Length = 357
Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats.
Identities = 102/281 (36%), Positives = 153/281 (54%), Gaps = 7/281 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ R+G+R S LAL SL ++H P I+ ++TKGD+I +++L +IG K
Sbjct: 6 KRDVIRVGSRKSELALIQTKHVIQSLKELH--PKKEFEIVTMNTKGDKILDKSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFTEE+E L + ID VHS KDMPT L G+ + A L RED RD + K L
Sbjct: 64 SLFTEELEIALENDRIDFVVHSLKDMPTTLPAGMALGAILKREDPRDAVVMSKKFKSKKL 123
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
S+IGTSSLRR A L R + + + RG + TRL KL++ AI+LA AG+
Sbjct: 124 SSLPKGSIIGTSSLRRSAQLSRNMPHLKIQNIRGNLNTRLKKLDDENGSYAAIILAAAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KR+ E I ++L E+ + GQGA+ +E ++ + + L++ + +T CER+F
Sbjct: 184 KRMGWEDRISQLLEPEEALYAIGQGALGVECRESDWEIRSLLEPLFDVETTLRCVCERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
L L G C + +A + K + L G V + DG+ +
Sbjct: 244 LKTLGGGCSAPVAVSSCLKKNELTITGAVWSLDGQTLVTNT 284
>gi|241766973|ref|ZP_04764769.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN]
gi|241362537|gb|EER58429.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN]
Length = 244
Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 140/241 (58%), Gaps = 4/241 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H + ++ ++T+GD+I +R+L+++GGKGLF
Sbjct: 8 PLVIATRESRLALWQAEHVQALLRAR----GHTVSLLGMTTQGDQILDRSLSKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G ++ + RED RD F+S SL+ L
Sbjct: 64 VKELEVALEEGRAHIAVHSLKDVPMELPEGFALACVMEREDPRDAFVSPRYASLEALPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL ++
Sbjct: 124 AVVGTSSLRRQVLLQALRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLQER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ P+ GQGA+ IE + E + + H++TW +V ERA + GSC
Sbjct: 184 IRTEFATTAMLPAAGQGALGIEIRSDRQDLIEALAPLAHQETWLTVTAERAVSRAMGGSC 243
Query: 245 K 245
Sbjct: 244 S 244
>gi|317181546|dbj|BAJ59330.1| porphobilinogen deaminase [Helicobacter pylori F57]
Length = 306
Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats.
Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IG+R S LAL A + L I + TKGD+I + L +IGGKGL
Sbjct: 2 KKLVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDAPLNKIGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 59 FTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 119 GAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQG 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ERAF+ L+G
Sbjct: 179 AKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLERAFVKGLNG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ +GK + G++ A+++ ++ + K
Sbjct: 238 GCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAK 297
Query: 303 NVFN 306
+
Sbjct: 298 EILE 301
>gi|317012081|gb|ADU82689.1| porphobilinogen deaminase [Helicobacter pylori Lithuania75]
Length = 306
Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 97/303 (32%), Positives = 151/303 (49%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 120 AKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E N+ ++ +N + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDAKSAFCCRLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ ++ + K
Sbjct: 239 CQIPIGVHASLVGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|301102795|ref|XP_002900484.1| porphobilinogen deaminase [Phytophthora infestans T30-4]
gi|262101747|gb|EEY59799.1| porphobilinogen deaminase [Phytophthora infestans T30-4]
Length = 361
Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 12/303 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK- 61
K+ + +R S LA+A + L + + P V+ T GD++ +R L+++G
Sbjct: 13 KRTIFVSSRKSQLAMAQTNTVIAMLEE--RFPDLQFVVGQEDTVGDQVLDRHLSDLGTTT 70
Query: 62 --GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---- 115
GLFT+ +E+ L++ AVHS KDMPT L GL ++A RE D + H
Sbjct: 71 ASGLFTKSLEEALLAKAASFAVHSLKDMPTTLPDGLVLAAITKRESPEDAAVIHPKHKEK 130
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLA 172
++L++L SVIGTSSLRR+ALL + RG I+TRL KL+ + AI++A
Sbjct: 131 GIKTLQELPEGSVIGTSSLRREALLRSQFPTFEIKTVRGNIQTRLAKLDEHDDYDAIIVA 190
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G +R + I EIL ++ F GQG+I +E ++ + E++K I E +
Sbjct: 191 ACGFRRGELGDRIDEILPMDTFGYGVGQGSIGVECRADDEETIEMLKTITDEKSAQLCKA 250
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
ER+ L L+G C+ A+ A TL VL+ DGK + +G R +G+
Sbjct: 251 ERSLLYHLEGGCQIAMGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQL 310
Query: 293 AQY 295
A+
Sbjct: 311 AER 313
>gi|307332259|ref|ZP_07611338.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
gi|306882087|gb|EFN13194.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
Length = 319
Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT
Sbjct: 15 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMGD-LSKLGGKGAFT 71
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L ++
Sbjct: 72 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDEMPA 131
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L ++ + RG RL KL + A++LA +G++R+ +
Sbjct: 132 GTRIGTSSVRRVAQLAITHPELECVPMRGNANRRLEKLEAGECDALMLAVSGLERIGRTD 191
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EIL ++ P G G + ++ ++ + E V + D W + ER L L G
Sbjct: 192 RISEILPVDTMCPPIGAGVLGLQCREDDTETIEAVAGLGDADVWKEITAERMLLHVLQGH 251
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 252 CNSPIAGYAKAERDGRLSLRARVFSPDGKRVLDAHEWAGPLDPATLGTSVAVALLRQGAR 311
Query: 303 NVFN 306
V +
Sbjct: 312 EVID 315
>gi|25453441|sp|Q59293|HEM3_CLOJO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 291
Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKGL
Sbjct: 2 KKIRIGSRDSKLAIIQSELIMSAIRKY--DPDIELELITMKTTGDKILDKTLDKIEGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L + E+D VHS KDMP + L + A RED RD FI
Sbjct: 60 FVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFILPQNG-----EN 114
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 115 GEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G
Sbjct: 175 RIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNGG 232
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + IA +A +GS + G+ + +GNR + + +G + + ++
Sbjct: 233 CSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMKS 287
>gi|226361138|ref|YP_002778916.1| porphobilinogen deaminase [Rhodococcus opacus B4]
gi|226239623|dbj|BAH49971.1| porphobilinogen deaminase [Rhodococcus opacus B4]
Length = 321
Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 152/314 (48%), Gaps = 15/314 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LA A R +L+ H+ ++ + TKGD+ + ++ +IG G
Sbjct: 6 TRTLRIGTRGSELATTQAGTVRDALISA----GHDAELVIIKTKGDQ-SMESVEKIG-VG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ L +L
Sbjct: 60 VFTAELREALADGRVDVAVHSYKDLPTARDERFTIAAIPPREDPRDALVARDGLVLGELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 120 PGSKVGTSAPRRTSQLRALGLGLDILPLRGNLQRRLGKVESGELDAVVLARAGLARIGRL 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I E L P+P QGA+ +E N ++ ++ ++ +V ERA LAEL+
Sbjct: 180 DLITESLEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALLAELEA 239
Query: 243 SCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + + A L G A DG G+ +A +GR A
Sbjct: 240 GCTAPVGAIAEVVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGSPENAEELGRSVA 299
Query: 294 QYIRFISNKNVFNF 307
+ + + + + N
Sbjct: 300 RELLELGARELMNV 313
>gi|309810452|ref|ZP_07704278.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185]
gi|308435584|gb|EFP59390.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185]
Length = 327
Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats.
Identities = 87/306 (28%), Positives = 142/306 (46%), Gaps = 10/306 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+ + L H + I+ ++T+GD +L ++GG G+F
Sbjct: 10 PIRLGTRRSHLAMTQSTWVAEQLRAH----GHAVEIVEITTEGDVNR-ASLAQMGGTGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
I + L+ E+D AVHS KD+P GL I+ RED RD ++ +L +L
Sbjct: 65 AAAIRRALLEDEVDMAVHSLKDLPVAPEPGLVIAGIPVREDPRDALVARDGLTLGELPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT S RR A L + D RG I+TR+ + + + ++LA AG+ R+++
Sbjct: 125 AVVGTGSPRRAAQLQALGLGFEIRDIRGNIDTRMGYVTSGELDGVILARAGLARVERTGA 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E ++ P+PGQGA+ +E + + + ++ DT +V ERA L L+ C
Sbjct: 185 ISETIDPLQMLPAPGQGALGLECREGDARVIAALAELDDADTRAAVTAERAVLGALEAGC 244
Query: 245 KSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + A + V A DG S G+ + +G A+ +
Sbjct: 245 AAPVGALAEIVEEPDGSLEISLRAFVGAPDGSFELRRSDVGSYDNPAAVGEALARTLLDD 304
Query: 300 SNKNVF 305
V
Sbjct: 305 GAGAVI 310
>gi|150016167|ref|YP_001308421.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052]
gi|254800241|sp|A6LSY5|HEM3_CLOB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|149902632|gb|ABR33465.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052]
Length = 291
Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 160/300 (53%), Gaps = 10/300 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I TR S LA SL D I ++I+ T+GDR + +L +IGG
Sbjct: 1 MNK--LTIATRKSKLAQTQTEIIMKSLKDKFNIDSEKMLIV---TEGDRKLDVSLAKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF ++IE L+ D AVHS KD+P +L +I+A REDIRDV IS K+
Sbjct: 56 KGLFVKDIEIALLEKRADGAVHSMKDVPYELSHEFEIAAITEREDIRDVLISKDNIPFKE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++IGTSS+RR L R+D+ ++ RG ++TRL K+ I+LA AG+KRL
Sbjct: 116 LRKGAIIGTSSIRRACQLKLMRNDLDIVPIRGNVQTRLEKMKEQNLDGIILASAGLKRLN 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+E +I E + + F P+ QGA+ IE + A++ + + + +V ER+F+ L
Sbjct: 176 EEDIITEYFDPKVFIPAVAQGALGIEC-LKTSSAKKYFEKMEDSNAKLTVEAERSFMRML 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C S I ++ +G+ LY GI D G + G++ D I +GR A I I
Sbjct: 235 NGDCHSLIGAYSEIQGNDLYMIGIY---DIGGRIVKKDILGDKNDHIELGRKLANKILEI 291
>gi|29831283|ref|NP_825917.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680]
gi|39931482|sp|Q82E76|HEM31_STRAW RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName:
Full=Hydroxymethylbilane synthase 1; Short=HMBS 1;
AltName: Full=Pre-uroporphyrinogen synthase 1
gi|29608398|dbj|BAC72452.1| putative porphobilinogen deaminase [Streptomyces avermitilis
MA-4680]
Length = 324
Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats.
Identities = 86/322 (26%), Positives = 153/322 (47%), Gaps = 22/322 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + ++ V P + ++ ++T GD + L +IGG
Sbjct: 1 MSEQALRLGTRRSKLAMAQSGQVADAVRQVTGRP---VELVEITTYGDT-SREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + ++
Sbjct: 57 TGVFVTALRDALLRGEVDFAVHSLKDLPTAQPDELALAAVPVREDPRDVLVARDGLTFEE 116
Query: 121 L----ALH-SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILL 171
L + +GT S RR A L + + RG +++R+ + + + ++L
Sbjct: 117 LGAPSPKGTARVGTGSPRRMAQLNAYARSHGLAVETVPIRGNVDSRIGYVRSGELDGVVL 176
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ + + E L ++ P+PGQGA+ IE +N + ++ T +V
Sbjct: 177 AAAGLHRIGRIDEVTEFLPVDTVLPAPGQGALAIECAADNADLIAALAELDDPFTRAAVT 236
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---- 282
ER+ LA L+ C + + A + G+V +DG ++S G
Sbjct: 237 AERSLLAALEAGCSAPVGALADLLADGQIVTEMRLRGVVGTTDGSTLVQLSTTGPVPETH 296
Query: 283 CDAINIGRDAAQYIRFISNKNV 304
A+ +GR+ A + +
Sbjct: 297 DQAMALGRELAAEMLAKGAAGL 318
>gi|86131003|ref|ZP_01049602.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134]
gi|85818414|gb|EAQ39574.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134]
Length = 304
Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats.
Identities = 93/304 (30%), Positives = 146/304 (48%), Gaps = 10/304 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L D + ++P+ + GD I ++ L E+G
Sbjct: 1 MS-KTIRIGTRDSELALWQAKTVQKQLEDH----GYTTELVPVKSTGDLILDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + A D
Sbjct: 56 TGIFTKTLDVAMLNGTVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKGA---PD 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRR+A L + D RG + TRL KL + + A AG+KR+
Sbjct: 113 YKQACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRIN 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+L + P+P QGA+ + + ++E +N T + ER FL L
Sbjct: 173 VLPENYEVL--DWMIPAPAQGAMLVVAMEEDAFSKEACAKLNDRTTALCTHIEREFLRTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A + F G++ + DG EV + + +A+ G D A +
Sbjct: 231 EGGCTAPIGALAQEIDGAIRFKGVLFSLDGATKIEVEQVVSTENALGFGTDCALEVLDNG 290
Query: 301 NKNV 304
+ +
Sbjct: 291 GRAL 294
>gi|163848145|ref|YP_001636189.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl]
gi|222526046|ref|YP_002570517.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl]
gi|163669434|gb|ABY35800.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl]
gi|222449925|gb|ACM54191.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl]
Length = 324
Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 14/312 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA + +L P + + +ST GDR+ + L+ +G KGLF
Sbjct: 4 LLLGTRGSALARVQSVWVADALRTA--FPSLEVELRIISTTGDRVLDVALSAVGDKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122
+E+E L++ E+D VHSAKDMPT GL ++A+ R D RDV + L L
Sbjct: 62 KELEHALLASEVDLCVHSAKDMPTATPDGLVLAAFPVRVDPRDVLVVRQAGLGTDLATLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+ +GTSSLRR + + R D+ + D RG ++TRL KL + + A++LA AG++RL
Sbjct: 122 AGARVGTSSLRRTSQVRHHRPDLQLTDVRGNVDTRLRKLASGQYDALILAAAGLRRLGLW 181
Query: 182 --------EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+ + L P+ QG + IET ++ + LV+ ++ + E
Sbjct: 182 DGTPGAQIGEAVVYPLEPSVMLPAVAQGILAIETRADDEATRTLVESLDDPAARAAALAE 241
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
RA L L+G C+ +A A + ++ G+V DG + G+ A +G A
Sbjct: 242 RALLRRLEGGCQIPVAAHAVMTDTGMHLRGMVGTLDGSTLVFAEQTGDPAQAEALGVAVA 301
Query: 294 QYIRFISNKNVF 305
+ + +
Sbjct: 302 EELLARGGDAIL 313
>gi|308061591|gb|ADO03479.1| porphobilinogen deaminase [Helicobacter pylori Cuz20]
Length = 306
Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|238499723|ref|XP_002381096.1| hydroxymethylbilane synthase, putative [Aspergillus flavus
NRRL3357]
gi|220692849|gb|EED49195.1| hydroxymethylbilane synthase, putative [Aspergillus flavus
NRRL3357]
Length = 337
Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats.
Identities = 105/310 (33%), Positives = 153/310 (49%), Gaps = 17/310 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F +GTR S LAL+ S+L V+ P + I T GD T E K
Sbjct: 16 SRKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTK 73
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + SL
Sbjct: 74 NLWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSL 133
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
DL SV+GTSS+RR A L + VID RG I TRL KL+ I+LA AG+
Sbjct: 134 SDLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGL 193
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER
Sbjct: 194 LRLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAER 253
Query: 235 AFLAELDGSCKSAIAGFAYC----KGS-TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
+ L L+G C + + GS L IV++ DGK EV +G + A
Sbjct: 254 SLLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGSVDSVEAAE 313
Query: 287 NIGRDAAQYI 296
+ G A+ +
Sbjct: 314 DFGVTVAKEL 323
>gi|207092595|ref|ZP_03240382.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_AG0C1]
Length = 306
Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 152/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEKSAFCCRLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|315586235|gb|ADU40616.1| hydroxymethylbilane synthase [Helicobacter pylori 35A]
Length = 306
Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK R G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKERQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|297156263|gb|ADI05975.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1]
Length = 315
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+ +GGKG FT
Sbjct: 11 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMGD-LSALGGKGAFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD + +L L
Sbjct: 68 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAYLKRDDIRDAVVHPGGLTLDQLPE 127
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL KL+ + A+LLA +G++R+ +
Sbjct: 128 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLDAGECDALLLAVSGLERIGRTD 187
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EIL +E P G G + ++ ++ + V + D W + ER L L G
Sbjct: 188 RISEILPVETMCPPIGAGVLALQCREDDTATIDAVSGLGDADAWKEITAERMLLHVLQGH 247
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 248 CNSPIAGYARAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 307
Query: 303 NVFN 306
V +
Sbjct: 308 EVID 311
>gi|110800724|ref|YP_696126.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124]
gi|169347253|ref|ZP_02866192.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495]
gi|123344731|sp|Q0TQG4|HEM3_CLOP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4239996|dbj|BAA74781.1| hydroxymethylbilane synthase [Clostridium perfringens]
gi|110675371|gb|ABG84358.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124]
gi|169296649|gb|EDS78780.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495]
Length = 291
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ K + LY G + +I + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKIL 288
>gi|332673079|gb|AEE69896.1| hydroxymethylbilane synthase [Helicobacter pylori 83]
Length = 306
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 154/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA G+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEVGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLEREFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|326329564|ref|ZP_08195886.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1]
gi|325952560|gb|EGD44578.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1]
Length = 336
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 92/311 (29%), Positives = 157/311 (50%), Gaps = 12/311 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGK 61
+ R+GTR S LA+ + L H + ++ + + GDR N LT
Sbjct: 2 RTLRLGTRRSQLAVTQSTLVAEMLRAQ----GHIVELVEIVSDGDRTQASNTPLTSANST 57
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L + EID AVHS KD+PT +G+++ A LPRED RDV ++ +L +L
Sbjct: 58 GVFVSALRDALHAKEIDLAVHSLKDLPTYPEEGIELVAILPREDPRDVIVARDGLTLGEL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S +GT S RR A + + + RG ++TR+ K+ + + A++LA AG+ R+ +
Sbjct: 118 PPGSRVGTGSPRRVAQIKALGLGLELAGIRGNVDTRIGKVRSGEFDAVVLARAGLARIDR 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+L+ P+PGQGA+ +E + ++++ ++ T +V ERA LA
Sbjct: 178 LDEVTEVLDPIQVLPAPGQGALAVECREGDADADVRKILTSLDDAPTRAAVEAERAVLAT 237
Query: 240 LDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L+G C + I A +G L+ + L+ DG + +S +G DA +GR A+
Sbjct: 238 LEGGCAAPIGTLADVVEGEEGPELWVRAVALSLDGSLSVRLSASGPLDDAAGVGRRLAEE 297
Query: 296 IRFISNKNVFN 306
+ ++ +
Sbjct: 298 MLAEGAADLTD 308
>gi|158287571|ref|XP_564464.3| AGAP011080-PA [Anopheles gambiae str. PEST]
gi|157019715|gb|EAL41625.3| AGAP011080-PA [Anopheles gambiae str. PEST]
Length = 599
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 148/290 (51%), Gaps = 17/290 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+G+R S LAL S L ++ P I ++T GDR+ N++L +IG K
Sbjct: 10 ATKTIRVGSRKSELALTQTKHVISLLQKLN--PDVVYEIHTMTTVGDRVLNKSLPKIGEK 67
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + H +L
Sbjct: 68 SLFTKDLEDALRTGGVDFVVHSLKDLPTSLPLGMAIGAVLEREDPRDALVLNERHRGCTL 127
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
L S++GTSSLRR A L R+ S ++V D RG + TRL KL+ K I+LA AG+
Sbjct: 128 ATLPRGSIVGTSSLRRSAQLARYYSHLAVCDIRGNLNTRLAKLDAEASKFAGIILAQAGL 187
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ K I +I+ + + GQGA+ +E N+ ++ + H +T + ER+F
Sbjct: 188 VRMGWNKRIDQIIEPHEILYAVGQGALAVECRSNDEYILGMLGKLCHLETQCRILTERSF 247
Query: 237 LAELDGSCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEV 276
L L G C + +A GS L G V + DGK
Sbjct: 248 LKTLGGGCSAPVAVRTDLKRRWRADDAEDGSPLVVEGAVWSLDGKTEIRT 297
>gi|182626954|ref|ZP_02954686.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721]
gi|177907690|gb|EDT70308.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721]
Length = 291
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 99/293 (33%), Positives = 158/293 (53%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V+ ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVDAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I ++ K + LY G + +I + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKILE 289
>gi|125717350|ref|YP_001034483.1| porphobilinogen deaminase [Streptococcus sanguinis SK36]
gi|254800260|sp|A3CL78|HEM3_STRSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125497267|gb|ABN43933.1| Porphobilinogen deaminase, putative [Streptococcus sanguinis SK36]
Length = 306
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 160/302 (52%), Gaps = 9/302 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+
Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122
F +EIE+ L++GEI+ AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 60 FVKEIERALLAGEINMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S+IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 120 KGSLIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179
Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L P+ QGA+ +E + + L+ + E T V ERA LA+
Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELLSLLAAVQDEKTAAEVAVERAVLAQ 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 240 MNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF-VSLQG--QDGQQLAEQAVRQLADK 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|118472022|ref|YP_885356.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155]
gi|118173309|gb|ABK74205.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155]
Length = 318
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 15/310 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A R +L+ H ++ +ST+GDR + +IG G+FT
Sbjct: 9 IRLGTRGSLLATTQAGTVRDALLAA----GHPCELVIISTEGDRNQG-PIADIG-IGVFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT + I A RED RD ++ L +L S
Sbjct: 63 AALREAIHDGRVDMAVHSYKDLPTASDERFCIPAIPRREDPRDALVARDGLVLGELPTGS 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRLN++ + + I++A AG+ R+ + V+
Sbjct: 123 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVTSGELDGIVVARAGLARIGRLNVV 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 183 TETLEPVQMLPAPAQGALAVECRAGDTELIAILSELDDADTRAAVTAERVLLAELEAGCS 242
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G DG S G A +G A +
Sbjct: 243 APVGAIAEVVESIDEDGNVFEELSLRGCAATLDGSDVIRASGIGTPDRAAELGVSVAAEL 302
Query: 297 RFISNKNVFN 306
+ + +
Sbjct: 303 FDLGARELLE 312
>gi|168206340|ref|ZP_02632345.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987]
gi|170662220|gb|EDT14903.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987]
Length = 291
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNKYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ K + LY G + +I + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKIL 288
>gi|111019045|ref|YP_702017.1| porphobilinogen deaminase [Rhodococcus jostii RHA1]
gi|110818575|gb|ABG93859.1| hydroxymethylbilane synthase [Rhodococcus jostii RHA1]
Length = 321
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 15/314 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LA A R +L+ H+ ++ + TKGD+ + ++ +IG G
Sbjct: 6 TRTLRIGTRGSELATTQAGTVRDALISA----GHDAELVIIKTKGDQ-SMESVEKIG-VG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ L +L
Sbjct: 60 VFTAELREALADGRVDVAVHSYKDLPTAPDERFTIAAIPPREDPRDALVARDGLVLGELP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S +GTS+ RR + L + + RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 120 AGSKVGTSAPRRTSQLRALGLGLDIRPLRGNLQRRLGKVESGELDAVVLARAGLARIGRL 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I E + P+P QGA+ +E N ++ ++ ++ +V ERA LAEL+
Sbjct: 180 DLITESIEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALLAELEA 239
Query: 243 SCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + + A L G A DG G+ +A +GR A
Sbjct: 240 GCTAPVGAIAEVVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGSPENAEELGRSVA 299
Query: 294 QYIRFISNKNVFNF 307
+ + + + + N
Sbjct: 300 RELLELGARELMNV 313
>gi|94498044|ref|ZP_01304607.1| porphobilinogen deaminase [Sphingomonas sp. SKA58]
gi|94422479|gb|EAT07517.1| porphobilinogen deaminase [Sphingomonas sp. SKA58]
Length = 313
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 117/292 (40%), Positives = 160/292 (54%), Gaps = 6/292 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR SPLALA A T +L+ H I I+ + T GDRI +R L +IGGK L
Sbjct: 11 RPLRLGTRGSPLALAQARLTAQALIAAHGWSADAIEIVTVQTSGDRIQDRALADIGGKAL 70
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+T+E+++ L++GE D +VHS KD+ T I+A LPR D RD I A S L
Sbjct: 71 WTKELDRALVAGETDLSVHSMKDVETVRHDIFHIAAMLPRADPRDKLIG--AASFDALPP 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ ++GTSS RR A + R R D ++ FRG + TRL KL + HA LLA AG+ RL +
Sbjct: 129 NPIVGTSSPRRGAQVKRLRPDATITLFRGNVATRLAKLAAGEVHATLLAAAGLDRLDQGN 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V I+ ++ P+P QGA+ IE N E V INH DT+D+V ERA L L G+
Sbjct: 189 VGT-IIPVDTMLPAPSQGAVGIEILAGNAPVIEAVAAINHRDTFDTVMMERAVLRGLGGT 247
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDA 292
C S IA A G L +++ DG+ + G+ +GR
Sbjct: 248 CHSPIAALALVDGDDLMLRAEIISPDGQETVSENLRLARGDLDAGEALGRAL 299
>gi|157964647|ref|YP_001499471.1| porphobilinogen deaminase [Rickettsia massiliae MTU5]
gi|189028151|sp|A8F1Y8|HEM3_RICM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157844423|gb|ABV84924.1| Porphobilinogen deaminase [Rickettsia massiliae MTU5]
Length = 351
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 98/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF
Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCKIVPIITSGDLIQNKPLYDIGGKALFL 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++
Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEAFNPE 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P GQG I +E ++ ++ INH T++ + ERAFL LD +C
Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLKICNQINHLPTFELIKPERAFLEYLDANC 242
Query: 245 KSAIAGFAYC 254
++ IA ++
Sbjct: 243 RTPIAAYSQY 252
>gi|302553238|ref|ZP_07305580.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
gi|302470856|gb|EFL33949.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
Length = 330
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 154/316 (48%), Gaps = 17/316 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+ R+GTR S LA+A + + ++ V P + ++ ++T GD ++ L +IGG
Sbjct: 13 EQGALRLGTRRSKLAMAQSGQVAEAVRRVTGRP---VELVEITTYGD-VSREQLAQIGGT 68
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A DL
Sbjct: 69 GVFVTALRDALLKGEVDFAVHSLKDLPTTQPDELVVAAVPVREDPRDVIVARDALKFTDL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ IGT S RR A L + DIS + RG ++TR+ + + + A++LA AG+
Sbjct: 129 PSGARIGTGSPRRMAQLNAYARSHSLDISTVPIRGNVDTRIGYVRSGELDAVVLAAAGLN 188
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + + L+++ P+PGQGA+ IE N + ++ T +V ER+ L
Sbjct: 189 RIGRGDEVTDFLSVDTVLPAPGQGALAIECAAGNADLVAALAELDDPFTRVAVTAERSLL 248
Query: 238 AELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINI 288
A L+ C + + A + +V +DG ++S G A +
Sbjct: 249 AALEAGCSAPVGALADLLADGQIVKEMRLRAVVGTTDGTRTVQLSTTGPVPQTHDRATAL 308
Query: 289 GRDAAQYIRFISNKNV 304
GR+ A + +
Sbjct: 309 GRELAAEMLAQGAAGL 324
>gi|95931480|ref|ZP_01314180.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684]
gi|95132465|gb|EAT14164.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684]
Length = 313
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 112/309 (36%), Positives = 174/309 (56%), Gaps = 9/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +IGTR S LAL A+ L D + I+ + T+GD++ + ++ +IG
Sbjct: 1 MSTK-IKIGTRRSKLALWQAYYVEQLLQDA----GMDTEIVEIDTRGDQVLDVSIAKIGS 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLK 119
KG+FTEE+E +L SG+ID AVHSAKDM ++L +G +I A+ RE + DV +S L
Sbjct: 56 KGVFTEELEDQLRSGDIDIAVHSAKDMQSELPEGFEIIAFTIREKVNDVVVSRDKSIRLG 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
D + IG+SS+RR+A+L + +++I+ RG ++TR+ K+++ + AILLAYAG+ R+
Sbjct: 116 DTSRPLTIGSSSVRRRAILKAYYPHLNIIEMRGNLQTRIGKMDDGQCDAILLAYAGVNRM 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQE-LVKVINHEDTWDSVNCERAFL 237
+ +I E L +E F P GQG++ IE+ +N + K +E + K +NH DT + ERAFL
Sbjct: 176 EYNDLIVETLPLEQFIPPVGQGSVAIESAINLDAKKRETIRKAVNHPDTEFRLLAERAFL 235
Query: 238 AELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C A +G L G +++ DG+ + G R DA +G A
Sbjct: 236 KTLKGGCSIPAFCMAELEGDDQLKVTGGMISLDGQTLIKNVLTGARSDAEQLGDQMANLT 295
Query: 297 RFISNKNVF 305
+
Sbjct: 296 LEQGGAQIL 304
>gi|332981813|ref|YP_004463254.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON]
gi|332699491|gb|AEE96432.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON]
Length = 292
Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 104/292 (35%), Positives = 154/292 (52%), Gaps = 4/292 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LALA S+L ++ P + + T+GDR+ + + IG KG+F
Sbjct: 3 KIRVGSRGSRLALAQTDAVISALRSLY--PDIDFERQIVKTEGDRLQHIPVERIGDKGIF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++IE+ L+ G ID AVHS KD+P++L GL I A RED RD FIS ++++ L
Sbjct: 61 VKDIEQALMDGHIDMAVHSMKDVPSQLPDGLMIGAMPWREDPRDAFISSDGRTIEQLGCR 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IG S RR A L I ++ RG I+TR+NK+N I+LA AG+KRL V
Sbjct: 121 ARIGIGSARRSAQLKNCFPGIDIVAIRGNIDTRINKINEAGLDGIVLAVAGLKRLGVSDV 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I +IL ++ P+ GQGA+ IE ++ KA +L+ +NH T +V+ ER F+A + G C
Sbjct: 181 ITQILPVDVCTPAAGQGALGIEIRKSDEKAADLLMPLNHAPTRAAVDAERMFMAMMGGDC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ I + G + V DG I S G N+ +
Sbjct: 241 NTPIGVYGEVDGVDILLRAAV-EKDGCIM-RHSVKGEVAQYQNVVSKLVALL 290
>gi|229490699|ref|ZP_04384537.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121]
gi|229322519|gb|EEN88302.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121]
Length = 324
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 92/312 (29%), Positives = 145/312 (46%), Gaps = 15/312 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ + TKGD+ T+ + +IG G+F
Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIIKTKGDQSTD-PVQKIG-VGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 65 TAELREALVDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E + P+P QGA+ +E N + ++ + T +V ERA LA L+ C
Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSANAELAAILAEHDDAGTRAAVTAERALLAGLEAGC 244
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A L G A DG G A +GR A+
Sbjct: 245 TAPVGAIAEIVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGAPDKAEELGRAVARE 304
Query: 296 IRFISNKNVFNF 307
+ + + + N
Sbjct: 305 LLELGARELMNV 316
>gi|255280051|ref|ZP_05344606.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469]
gi|255269142|gb|EET62347.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469]
Length = 309
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 93/294 (31%), Positives = 151/294 (51%), Gaps = 6/294 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IG+R S LA+ + + ++ + P + I+ + T GD+I +RTL ++GGKG
Sbjct: 2 KRTIIIGSRESRLAVIQSEIVKQAIEQ--ENPQLAVSILTMKTTGDKILDRTLDKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L+ D +VHS KD+P ++ K L + A+ RED+RDV + D
Sbjct: 60 LFVKELDRALLEKRSDLSVHSLKDVPMEVPKELPLLAFSAREDVRDVLVLPEGAVEPDF- 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
G S RR + ++ RG + TRL KL+ + A++LA AG+KRL E
Sbjct: 119 -SKPFGCSGRRRALQIKELYPHVTCHPVRGNVLTRLRKLDEGEYGALILAAAGLKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + E+ P+ GQG + ++ +K + ++ D+ CERAF+ LDG
Sbjct: 178 GRISRYFSTEEMVPAAGQGILAVQGRCGED--HSYLKAFSDDEARDAALCERAFVRALDG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C S +A +A +GS + G+ D + G R DA IG + A+Y+
Sbjct: 236 GCSSPVAAYARTEGSRILLTGLYYEEDTGRWCRGCLGGARTDAERIGAELAEYL 289
>gi|308182412|ref|YP_003926539.1| porphobilinogen deaminase [Helicobacter pylori PeCan4]
gi|308064597|gb|ADO06489.1| porphobilinogen deaminase [Helicobacter pylori PeCan4]
Length = 306
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 157/307 (51%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I + T GD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKEC---SMESEIQIVKTTGDKILDAPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACTTKRADVRDTFLSMKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLE 175
Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ERAF+
Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLERAFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I A G + ++ +GK + G++ A ++ ++ +
Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQS 294
Query: 300 SNKNVFN 306
K +
Sbjct: 295 GAKEILE 301
>gi|18310417|ref|NP_562351.1| porphobilinogen deaminase [Clostridium perfringens str. 13]
gi|168216823|ref|ZP_02642448.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239]
gi|25453024|sp|Q8XKG4|HEM3_CLOPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|18145097|dbj|BAB81141.1| hydroxymethylbilane synthase [Clostridium perfringens str. 13]
gi|182381001|gb|EDT78480.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239]
Length = 291
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + ++++ T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKGKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I ++ K + LY G + +I + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKILE 289
>gi|296123437|ref|YP_003631215.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776]
gi|296015777|gb|ADG69016.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 149/316 (47%), Gaps = 18/316 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A SL + P + ++ ++T GDR+ L + GG+G+FT
Sbjct: 4 LRIATRASQLALWQANFVADSLRSL--DPELTVELVHVTTTGDRVQGEPLRQFGGQGVFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----LKDL 121
E++ L+ G D AVHS KD+PT GL+++A R + D + T S L L
Sbjct: 62 REVQAALLEGRADIAVHSLKDLPTVPTAGLELAAVPARAPVADALLLPTGHSGPASLAML 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGT S RR+A LLR R D+ + RG ++TR+ KL+ + ++LA AG+ RL
Sbjct: 122 PRGARIGTGSPRRQAQLLRIRPDLVCSEVRGNLDTRIRKLDAGEYEGLILAVAGLSRLGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I IL P+ GQGA+ +E + V + T +V+ ERA L L+
Sbjct: 182 SDRISLILAPPTMFPAAGQGALGLECRHGDEATIRWVSQLEDRQTRLAVDAERAVLRTLE 241
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSR----------NGNRCDAI-NIG 289
C + + +A K TL+ I++A DG + +GN DA +G
Sbjct: 242 AGCHAPVGTWASWKSPETLHLEAILIAPDGSETLAAASSMQGPLSQYGSGNALDAAHELG 301
Query: 290 RDAAQYIRFISNKNVF 305
+ A +
Sbjct: 302 ANVAHLLLKQGASRYL 317
>gi|168214449|ref|ZP_02640074.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969]
gi|170714079|gb|EDT26261.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969]
Length = 291
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 100/292 (34%), Positives = 158/292 (54%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG I+TR+ K+ I+LA AG+KRL E+VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNIQTRIKKITEENLDGIILAAAGLKRLGMEEVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ K + LY G + +I + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKIL 288
>gi|108562665|ref|YP_626981.1| porphobilinogen deaminase [Helicobacter pylori HPAG1]
gi|123073837|sp|Q1CUR5|HEM3_HELPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|107836438|gb|ABF84307.1| porphobilinogen deaminase [Helicobacter pylori HPAG1]
Length = 306
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 152/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++++ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C
Sbjct: 181 YRKAFSVKEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEKSAFCCRLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|332877010|ref|ZP_08444763.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332685118|gb|EGJ57962.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 290
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 100/296 (33%), Positives = 152/296 (51%), Gaps = 10/296 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP RIGTR S LAL A + L + + I+ + ++GD L E+G G+
Sbjct: 2 KPIRIGTRDSQLALWQAETVQYQLELL----GYPTEIVGIKSEGDLELTTPLYEMGVTGI 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L+ GEID AVHS KD+PT L G+ + A L R + D+ + + DL
Sbjct: 58 FTKALDIALLKGEIDIAVHSMKDVPTLLPDGIAVGAVLERGNPHDILVYKG--DVSDLDS 115
Query: 124 H-SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ I TSSLRRKA L ++ + RG + TRL KL +N + A AG++R+ +
Sbjct: 116 RVATIATSSLRRKAQWLHRYPHHTIENLRGNVNTRLQKLADNPWDGAIFAAAGLERI--D 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
K+ ++ L ++ P+P QGAI + H +N Q ++ I+ T+ ERAFL L+G
Sbjct: 174 KLPEDYLVLDWMLPAPAQGAIMVLAHEDNVDLQGILLKIHDGKTYIETQVERAFLRALEG 233
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + I +A G ++F G + + DGK V+ + D G A IR
Sbjct: 234 GCTAPIGAYAEFDGEQVHFKGGLWSEDGKQEALVNETFDHID-EFTGEWLASKIRD 288
>gi|29827579|ref|NP_822213.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680]
gi|39931490|sp|Q82P95|HEM32_STRAW RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName:
Full=Hydroxymethylbilane synthase 2; Short=HMBS 2;
AltName: Full=Pre-uroporphyrinogen synthase 2
gi|29604679|dbj|BAC68748.1| putative porphobilinogen deaminase [Streptomyces avermitilis
MA-4680]
Length = 314
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++ + T GD+ L+++ GKG FT
Sbjct: 10 IRIVSRDSPMALAQVARVRAELAALH--PRTRTEVVAVKTTGDKWMGD-LSKVDGKGAFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L
Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTMFAAFLKRDDIRDALVHPGGLTLDELPP 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +E
Sbjct: 127 GTRIGTSSVRRVAQLAAAYPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRED 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L E P G G + ++ + E + + T ER FL L G
Sbjct: 187 VITEVLEPETMMPPIGAGILALQCREGDTGLIETISELGDPGTHREATAERMFLHVLQGH 246
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V DGK R D +G A + +
Sbjct: 247 CNSPIAGYARTERNGELSLRASVFTLDGKTVLNAHEWAGRLDPATLGTSVAVALLRQGAR 306
Query: 303 NVFN 306
+ +
Sbjct: 307 ELID 310
>gi|88607872|ref|YP_505325.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ]
gi|88598935|gb|ABD44405.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ]
Length = 304
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 102/293 (34%), Positives = 160/293 (54%), Gaps = 4/293 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A ++++ + + II + T GD T+ L +IGGKGLF
Sbjct: 7 IRIGTRGSLLAMQQARIVKTAIETNYA--ELSTRIITIKTSGDMNTHVPLYDIGGKGLFI 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHSAKD+P + L I LPR D F+S S+ L L++
Sbjct: 65 KEIEEALLDNIIDVAVHSAKDVPGIYSEDLDIPCILPRASALDAFLSSKYDSIASLPLNA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RRK LL R D+ +I RG +ETR++K+ + I+LA AG+ R+ K+ +I
Sbjct: 125 KIGTSSVRRKVQLLTMRPDLEIIPMRGNVETRISKMQMGECDGIVLAEAGLYRVSKDNLI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L E + GQGAIC++ + + E++K +N ++ +V+ ER+F+ +DGSC
Sbjct: 185 SEVLQPEVMLGAVGQGAICVQCRRYDRRILEILKKLNCHKSYTTVSAERSFMRAVDGSCN 244
Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ +A A L ++ D + R +A + G + ++
Sbjct: 245 TPLAAMAKYIDMDILTMKCMLAD-DARNMVFTERVFAEQNAESAGYEMGTLLK 296
>gi|225548234|ref|ZP_03769519.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM
10507]
gi|225040673|gb|EEG50919.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM
10507]
Length = 291
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 8/295 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LA+ + ++ L + II + T GD I +RTL +IGGKGLF
Sbjct: 3 TIRIGSRESKLAVIQSELVQNYLRAQ----GLDAQIITMKTTGDIILDRTLDQIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+++ L+ G D +VHS KD+P ++ + L + AY RED RDV I + K+L L
Sbjct: 59 VKELDRALLDGRSDLSVHSLKDLPMEVAQDLPVVAYSKREDPRDVLILPQGE--KELDLS 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG+SSLRR L + + RG + TRL KL++ + A++LA AG+KRL +
Sbjct: 117 KPIGSSSLRRCIQLKKLFPEAECKSVRGNVLTRLEKLDSGQYSALVLAAAGVKRLGLQGR 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I +E+ P+ GQG + ++ + N ERAF+ LDG C
Sbjct: 177 ISRYFTVEEMLPAAGQGILAVQGKAGQDY--SYLGAYNDRQAQAEALAERAFVRWLDGGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S +A A C+G L G+ +H+ G A +G + A+ ++
Sbjct: 235 SSPVAAHAVCQGERLQMTGLYYHDLTGQWHKEQIAGETSQAKMLGVELAKRMKGR 289
>gi|225872374|ref|YP_002753829.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196]
gi|225793745|gb|ACO33835.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196]
Length = 312
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 103/324 (31%), Positives = 151/324 (46%), Gaps = 39/324 (12%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI----GGK 61
RIG+R S LAL A + L + H + I + T GD + + T ++ GGK
Sbjct: 2 MRIGSRGSQLALWQANHIAARLRTL----GHEVTIEIIRTTGDALQHVTFAKVSTELGGK 57
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+EIE+ L G ID AVHS KD+PT L ++A R D RD +S SL L
Sbjct: 58 GIFTKEIEEALREGRIDLAVHSLKDLPTDLDPAFTLAAIPERVDPRDALLSARYTSLASL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSS RR+A LL RSD+ +FRG ++TR+ K+ +A AI+LA AG++RL
Sbjct: 118 PHGACVGTSSERRRAQLLVHRSDLRFQEFRGNVDTRIRKMVEGQADAIILASAGLERLGL 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +E L E P+ GQGA+ IET ++ + ++ ++H T +V ER LA L
Sbjct: 178 TEYRRECLAPEILCPAAGQGALAIETRADDAETLAILASLDHSATRYAVTAERTALASLG 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC------------------ 283
G C+ I V +DG + G
Sbjct: 238 GGCQVPIGIHC----------APVPGADGAYAIQGVVAGAAAKAASSAAHPVIRVAFEHQ 287
Query: 284 ---DAINIGRDAAQYIRFISNKNV 304
+GR A+ + +
Sbjct: 288 QGLSPQALGRQLAEELLRQGAQPF 311
>gi|167754990|ref|ZP_02427117.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402]
gi|237735283|ref|ZP_04565764.1| porphobilinogen deaminase [Mollicutes bacterium D7]
gi|167705040|gb|EDS19619.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402]
gi|229381028|gb|EEO31119.1| porphobilinogen deaminase [Coprobacillus sp. D7]
Length = 297
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 3/292 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL L + P + I + T GD++ + L +I KG+F
Sbjct: 2 KIIVGSRGSSLALKQTEYVIEKLQRAY--PENEYEIKVIHTIGDKMQHIALDKINDKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK+L+ ID AVHS KDMP+ GL + L D RD + SL L H
Sbjct: 60 VKEIEKELLEHTIDLAVHSLKDMPSDNPAGLVYAKTLAPSDYRDCLVLKNCSSLARLPQH 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ I T S RRK LL+ R D+ ++D RG + TRL K+ N + ++LA AG+KRL E +
Sbjct: 120 ATIATGSKRRKYQLLKLRPDLKIVDIRGNVNTRLQKMANQEIDGLVLASAGLKRLGLEDL 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQG + I+ + + ++ I+ E T + ER FL ++GSC
Sbjct: 180 ISEYLDETKMIPACGQGILAIQVRQ-DSELLTMINNISDEITTTRMELERLFLKTVNGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ G+A G ++FYG++ DG + + + + DA A+ +
Sbjct: 239 HIPVGGYAKIIGDQVHFYGLLGNEDGTVLKNIDKKFSLKDASEEVTALAEML 290
>gi|254388880|ref|ZP_05004112.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|254393333|ref|ZP_05008481.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294813175|ref|ZP_06771818.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064]
gi|326441528|ref|ZP_08216262.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197702599|gb|EDY48411.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|197706968|gb|EDY52780.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294325774|gb|EFG07417.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064]
Length = 319
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 156/317 (49%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + + + P + ++ ++T GD I+ L +IGG
Sbjct: 1 MTERALRLGTRRSMLAMAQSGQVAQEVRRLTGRP---VELVEITTYGD-ISREQLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ +
Sbjct: 57 TGVFVAALREALLRGEVDFAVHSLKDLPTGQPDELALAAIPRREDPRDVLVARDGLTFDR 116
Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L I + RG I+TR+ + + K A++LA AG+
Sbjct: 117 LPDGARVGTGSPRRMAQLNAYARAHGLRIETVPIRGNIDTRIGYVRSGKLDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + ++L+++ P+PGQGA+ IE + + ++ T +V ER+
Sbjct: 177 NRIGRADEVTDVLSVDSVLPAPGQGALAIECAAADADLAATLGALDDPHTRVAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A G + G+V +DG ++S G DAI
Sbjct: 237 LAALEAGCSAPVGALADLLGDEEVVTEMRLRGVVGTTDGSTLVQLSTTGPVPTSHGDAIA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+GR+ A + +
Sbjct: 297 LGRELASEMLAKGAAGL 313
>gi|291615715|ref|YP_003518457.1| HemC [Pantoea ananatis LMG 20103]
gi|291150745|gb|ADD75329.1| HemC [Pantoea ananatis LMG 20103]
Length = 244
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 124/234 (52%)
Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS 131
++ D AVHS KD+P +GL + R+D RD F+S+ S+ +L +VIGTSS
Sbjct: 1 MLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDELPQGAVIGTSS 60
Query: 132 LRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNI 191
LRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL I++ L
Sbjct: 61 LRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLGLADRIRQPLPA 120
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251
+ P+ GQGA+ IE +++ L++ +NH+DT V ERA L+G C+ I F
Sbjct: 121 DISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVKAERAMNTRLEGGCQVPIGSF 180
Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
A +G L+ G+V A DG + R G R A +G A + + +
Sbjct: 181 AVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGGAREIL 234
>gi|182416929|ref|ZP_02948313.1| porphobilinogen deaminase [Clostridium butyricum 5521]
gi|237667199|ref|ZP_04527183.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379227|gb|EDT76728.1| porphobilinogen deaminase [Clostridium butyricum 5521]
gi|237655547|gb|EEP53103.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 292
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 8/297 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K + TR S LA SL + ++I+ T+GDR + +L +IGG
Sbjct: 1 MDK--LILATRKSRLAQVQTEIVMDSLKNKINKESEKLLIV---TEGDRKLDVSLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF ++IE L+ G D AVHS KD+P +L +I+A + REDIRDV IS S
Sbjct: 56 KGLFVKDIECALLEGSADAAVHSMKDVPYELSNEFEITAIIEREDIRDVLISKDGISFSK 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RR A L RSDI V+ RG ++TRL K+ + I+LA AGI RLK
Sbjct: 116 LRYGAKIGTSSIRRAAQLKLLRSDIEVVPIRGNVQTRLAKMESENLDGIILAAAGIHRLK 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +I E + ++F P+ QGAI IE V N + + K++++ + +V ER+F+ EL
Sbjct: 176 LDSIITEYFDPKEFIPAVSQGAIGIEC-VKNSENSKYFKMLDNSEARITVEAERSFMREL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
G C S I ++ G LY G + +G + G + + + +GR A+ I
Sbjct: 235 KGDCHSLIGAYSEVTGDELYMIG-IYDLNG-VIVRKDIKGKKSNHLEVGRKLAEKIL 289
>gi|256820282|ref|YP_003141561.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271]
gi|256581865|gb|ACU93000.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271]
Length = 288
Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats.
Identities = 97/293 (33%), Positives = 151/293 (51%), Gaps = 8/293 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A ++ L + + I+ + GD ++ L E+G G+F
Sbjct: 3 TIRIGTRDSELALWQAKTVQNQLKTL----GYPTEIVSTKSHGDIELSKPLYEMGVTGIF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ ++ L++GEID AVHS KD+PT L +G+ + A L R + DV + S + A
Sbjct: 59 TKALDIALLNGEIDIAVHSMKDVPTALPEGIAVGAVLKRGNPHDVLVYKGDLSFLE-AEI 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K+
Sbjct: 118 ATIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERIN--KL 175
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ L ++ P+P QGAI + +N Q+ + ++ + T+ + ER FL L+G C
Sbjct: 176 PEKHLVLDWMLPAPAQGAIVVVVREDNVALQKKLLPLHDDYTYIATQLERDFLRALEGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ I FA K LYF G + + DGK + + D G A I+
Sbjct: 236 TAPIGAFAEFKDDKLYFKGGLWSEDGKEASVIDEVLTQID-EYTGEKLATMIK 287
>gi|145220672|ref|YP_001131350.1| porphobilinogen deaminase [Mycobacterium gilvum PYR-GCK]
gi|315442377|ref|YP_004075256.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1]
gi|189028094|sp|A4T340|HEM3_MYCGI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145213158|gb|ABP42562.1| hydroxymethylbilane synthase [Mycobacterium gilvum PYR-GCK]
gi|315260680|gb|ADT97421.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1]
Length = 312
Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 14/310 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +IG G+FT
Sbjct: 2 IRIGTRGSLLATTQAGTIRDALIAA----GHDAELVIISTEGDRRADEPIADIG-VGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +D AVHS KD+PT + I+A RED RD ++ L +L S
Sbjct: 57 AALREAIADNVVDAAVHSYKDLPTAVDPRFMIAATPVREDARDALVARDGMVLGELPAGS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +V+
Sbjct: 117 VIGTSSPRRVAQLKALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVAKAGLSRIGRLEVV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + +L+ ++ DT +V ER LAEL+ C
Sbjct: 177 TETLEPVQMLPAPAQGALAIECRAGDTALAQLLAELDDADTRAAVTAERTLLAELEAGCS 236
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V DG S G+ A +G A +
Sbjct: 237 APVGAIAEVVESIDEDGRVFEELSLRGCVATLDGSDVIRASGIGSPDRARELGLSVAAEL 296
Query: 297 RFISNKNVFN 306
+ +++ +
Sbjct: 297 FDLGARDLLD 306
>gi|300774730|ref|ZP_07084593.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910]
gi|300506545|gb|EFK37680.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910]
Length = 302
Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 159/301 (52%), Gaps = 8/301 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A E L + + + I+P+ + GD+ N+ L +G G+
Sbjct: 2 KSIRIGTRNSALALWQAREVARHLQNNNYL----TEIVPIVSSGDKNLNQPLYSLGITGV 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT +++ L++ EID AVHS KD+PT+L + +++ AYL R+ +D+ I + K+
Sbjct: 58 FTRDLDIALLNDEIDIAVHSLKDVPTQLPQNIEMIAYLERDYPQDILIRKESSRNKEF-H 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ TSSLRR+A LR D RG I+TRL KL A +L+ AGIKR+K E
Sbjct: 117 ELKLATSSLRRRAFWLRNYPTAEFSDIRGNIQTRLQKLEEGDFDATILSLAGIKRMKME- 175
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E+L + +P QG I + H + P+ E+V+ INH++T V ER FL+ L+G
Sbjct: 176 IDYEMLPL--MISAPSQGVISVAGHTDKPEINEIVRQINHQETQICVEIERNFLSTLEGG 233
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + I FA G + F + + DGK V N A N G A+ + K
Sbjct: 234 CTAPIGAFAEIIGDQIRFKAALCSLDGKNCIAVDENFVYTPAENFGEKYAKVVLENGGKE 293
Query: 304 V 304
+
Sbjct: 294 L 294
>gi|38233015|ref|NP_938782.1| porphobilinogen deaminase [Corynebacterium diphtheriae NCTC 13129]
gi|55976429|sp|Q6NJK0|HEM3_CORDI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|38199274|emb|CAE48905.1| Porphobilinogen deaminase [Corynebacterium diphtheriae]
Length = 294
Score = 298 bits (765), Expect = 6e-79, Method: Composition-based stats.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 9/302 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA + R L P+ ++ ++T GD N E G G+F
Sbjct: 2 TLKIGTRGSLLATTQSGHVRDDLR------PYEAELVIVTTHGDV--NMAPVERIGVGVF 53
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + ++L +G D AVHS KD+PT+L R D RD I+ SL DL
Sbjct: 54 TQALREELHTGGCDIAVHSFKDLPTELDP-RFHLVVPKRADFRDCLIARDGLSLADLPAG 112
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 113 ALIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVTSGELDAVVLAYAGLTRVGRGDE 172
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + +DF P+P QGA+ +E ++ A+E + I E ER L L+ C
Sbjct: 173 ATQVFDPQDFLPAPAQGALAVECRADDAYAREAIDSICDEQAQVCAVTERVVLNRLEAGC 232
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A A TL V+A DG + + + + + + + +
Sbjct: 233 TAPVAAHATLNDGTLTLTAAVIALDGSKVVRRELSAPVAENVALAEELTRALIADGAATI 292
Query: 305 FN 306
Sbjct: 293 LG 294
>gi|313905566|ref|ZP_07838929.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6]
gi|313469629|gb|EFR64968.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6]
Length = 299
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 9/299 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME IGTR S LAL L + K P ++ ++ ++T GDRI +R L +IGG
Sbjct: 1 MENNRIIIGTRESRLALVQTGMVADFLRE--KYPERSVELLKMTTTGDRILDRRLDQIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L +GE D VHS KD+P +L + L + RED RDV + + D
Sbjct: 59 KGLFVKELDRALAAGECDLCVHSMKDLPMELPEELPLLGCSRREDPRDVLVLPAGRKEPD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
IGTSS RR + + D RG ++TRL KL+ ++LA AG+KR+
Sbjct: 119 --PSLPIGTSSRRRILQVQKLYPDAKFESVRGNLQTRLKKLDEGLYGGLILAAAGLKRMG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E+ P+ GQG + I+ + + T + ERAF+ L
Sbjct: 177 LENRISRYFSTEEVIPAAGQGVLAIQGRADTYDFD--LDGFIDPGTMLATLAERAFVRRL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296
+G C +A + G +L G+ + ++ R+ + +A +GR A+ +
Sbjct: 235 NGGCSLPVAAYGEFDGESLALRGLYYDEEKRVSRTEERSAIVRTKEEAEALGRGLAEQL 293
>gi|303239240|ref|ZP_07325769.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2]
gi|302593285|gb|EFL63004.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2]
Length = 293
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 148/297 (49%), Gaps = 9/297 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+G+R S LA+ + ++ +I + T GD+I + TL +IGGKGL
Sbjct: 2 KTIRVGSRDSKLAIIQSQMVMDAIKSYDS--NIKTELITMKTTGDKILDVTLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+++ LI+GE+D VHS KDMP ++ + L + A RED RDV I Q+ D
Sbjct: 60 FVKELDEALINGEVDITVHSYKDMPMQIDEDLPVVALSTREDERDVLILPKGQTFSDKP- 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+G SS RR L ++ RG + TRL KL++ + AI+LA AGIKRL E+
Sbjct: 119 ---VGCSSERRTMQLKEL-GFENIKPLRGNVITRLKKLDDGEYSAIVLAAAGIKRLGLEE 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I +++ P+ QG I ++ ++ + + ERAF+ L+G
Sbjct: 175 RISRYFTVDEIMPAACQGIIAVQARKGED--TSYLRCFHSYASQVISEAERAFITALNGG 232
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C S +A +AY L G+ + + KI S++G A +G + A ++
Sbjct: 233 CSSPVAAYAYLDKDILVLNGLYVDKENKIAVRGSQHGTPAQAAVLGEELANRLKERG 289
>gi|302556915|ref|ZP_07309257.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
gi|302474533|gb|EFL37626.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
Length = 311
Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L P ++P+ T GD+ L+ + GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAAAR--PGVRTEVVPVKTTGDKWLGD-LSAVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++G D AVH KD+P L G +A+L R+D+RD + +L +LA
Sbjct: 64 KEVDAALLAGRADVAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELAP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L ++ + RG R+ KL +A A+LLA +G++R+ +
Sbjct: 124 GTRIGTSSVRRVAQLAVSHPHLTCVPLRGNANLRMEKLAAGEADALLLAVSGLERIGRAD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + H DT ER FL L G
Sbjct: 184 VISEVLSPEAMMPPIGAGILALQCREGDTALIEAVSALGHPDTHREATAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A L V +DGK R D +G A + +
Sbjct: 244 CNSPIAGYAQVDLSGELSLRACVFTADGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 EIID 307
>gi|154496817|ref|ZP_02035513.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC
29799]
gi|150274069|gb|EDN01169.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC
29799]
Length = 287
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 144/296 (48%), Gaps = 11/296 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LA+ + ++ P + ++ + T GD+I +RTL ++GGKGLF
Sbjct: 2 KLRIGSRESVLAVTQSELVMEAIRAF--DPSIELELVTMKTTGDKILDRTLDKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E++ L+ G +D VHS KD+P + L ++ + RED RD + ++ +L
Sbjct: 60 VRELDAALLEGRVDITVHSCKDLPMETDPRLPLAGFSKREDPRDALVLPAGKT--ELDPS 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG +S RR L D+ V RG ++TRL KL+ + A++LA AG+KRL E
Sbjct: 118 LPIGCASRRRAIQLAALYPDMEVAPVRGNVQTRLRKLDEGQYSALVLASAGLKRLGLEGR 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E+ P+ GQG + ++T + + + + ERAF+ LDG C
Sbjct: 178 IARYFTAEEMIPAAGQGILAVQTRAG--ENYPCLAAVTDREGTICALAERAFVRMLDGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
S +A G TL G+ +G+ +G +A +G A+ ++ +
Sbjct: 236 SSPVAAHGVVDGDTLILTGM--DENGR---RDRISGPVTEAEQLGETLARRMKEAA 286
>gi|296138401|ref|YP_003645644.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162]
gi|296026535|gb|ADG77305.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162]
Length = 318
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 15/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ ++T GD ++ + +IG G+F
Sbjct: 14 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIVTTPGDLSSD-PVEKIG-VGVF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + L +GE+D AVHS KD+PT L ++A PRED RD ++ L +L
Sbjct: 68 TSALRDALANGEVDVAVHSYKDLPTAPDDRLVLAAVPPREDSRDALVARDGMVLGELPAG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSS RR L + + RG +++RL K+ + + AI++A AG+KR+ +
Sbjct: 128 SVVGTSSPRRATQLTALGLGLEIRPLRGNLDSRLRKVADGELDAIVVALAGLKRIGRHDE 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L+ P+P QGA+ +E + Q ++ ++ T +V ERA LAEL+ C
Sbjct: 188 VTEALDPVQMLPAPAQGALAVECRRGDADLQSVLSELDDHWTRAAVTAERALLAELEAGC 247
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A L GI LA+DG + S G +A +G A+
Sbjct: 248 TAPVGAIAEVVESLDDDGRIFEELSLRGIALAADGSDSVKASAVGPVGEAGALGTALARE 307
Query: 296 IRFISNKNVF 305
+ + +++
Sbjct: 308 LLDLGARDLL 317
>gi|72004296|ref|XP_781025.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115932051|ref|XP_001188143.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 324
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 145/318 (45%), Gaps = 17/318 (5%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M K R+G+R S LA+ L VH P I+ + T GD I ++ L I
Sbjct: 1 MADKMEIVRVGSRKSELAMIQTNHVVEMLQKVH--PETEFKIVTMETIGDHIQDKPLASI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---A 115
G LFT+E+EK L E+D VHS KDMP++L + I A RED D + H
Sbjct: 59 GESNLFTKELEKALALDEVDMLVHSLKDMPSRLPSNMAIGAICEREDPHDALVLHKKLTG 118
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYA 174
S++ + SV+GTSS+RR A L R + D RG + TRL KL+ + ++LA A
Sbjct: 119 ISIETMKEGSVLGTSSVRRVAQLKRKFPHLVFKDVRGNLNTRLRKLDEGQVYDGLVLAVA 178
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R+ E I +IL + S QGA+ IE N + EL++ +NH T ER
Sbjct: 179 GMMRMGWEHRISQILKPDICKYSVSQGALGIEIKTKNRRMHELLRQLNHVPTLIRCIAER 238
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN------RCDAINI 288
L L+G C + +A + + + ++ ++ S +A +
Sbjct: 239 GLLKTLEGGCSAPVAVHSELEENRHSLDAE---TNEEMKLFSSVIAPWVSQHAMQEAEAL 295
Query: 289 GRDAAQYIRFISNKNVFN 306
G A+ + +
Sbjct: 296 GVSVAKGLFDKGAGPILE 313
>gi|269215656|ref|ZP_06159510.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122]
gi|269131143|gb|EEZ62218.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122]
Length = 318
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 96/311 (30%), Positives = 143/311 (45%), Gaps = 7/311 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A + ++ P + I + T GDR L EIG
Sbjct: 1 MHNDTCVIGTRGSALALWQAHAVKRAIEASR--PDVSCEIRVIKTTGDRNLATPLAEIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117
KGLFT+++E L++GE+D VHS KD+PT+L G I+A L R D RDV + A+
Sbjct: 59 KGLFTKDLEAALVAGEVDICVHSMKDVPTELANGCGITAMLERADARDVIVCGPRIQAEC 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L D+ S +GT SLRR A + S I RG ++TR+ K + +LA AG+
Sbjct: 119 LADVPAGSRLGTGSLRRVAQIRAGFSGIVPTPIRGNVDTRIAKACGEEYEGAVLAAAGVT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ I + + + P+ GQGA+ IE + + + EL I+ T V ER L
Sbjct: 179 RMGLADRIAAYIPVSEIVPAVGQGAVGIEARLGDERVCELCARIDDAATRVCVEAERIVL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA--INIGRDAAQY 295
L+G C+ + + + +V + DG V+ DA ++ R
Sbjct: 239 CALEGGCQVPMGAYMRFDSGDIAADAVVASVDGSRVARVALRVPASDATPADVARRVLAE 298
Query: 296 IRFISNKNVFN 306
+ +
Sbjct: 299 LSAQGADVILE 309
>gi|298674197|ref|YP_003725947.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303]
gi|298287185|gb|ADI73151.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303]
Length = 308
Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 146/302 (48%), Gaps = 7/302 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LAL L + N + + T GD T+R L E+GG G F
Sbjct: 3 LIIGTRGSSLALTQTRRVSQMLKE----EGVNTFLKIIKTSGDSFTDRPLHELGGVGAFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+++++SGE+D AVHS KD+PT+ + L SA L R+ D ++ +L +L +
Sbjct: 59 REIDERMLSGELDIAVHSMKDLPTERPEELPTSAVLKRDSPFDALLTRDGSTLDELPEGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT+SLRRK+ +LR+R D V RG I+TRL KL + I+LA AG++R+ +
Sbjct: 119 VIGTTSLRRKSQVLRYRPDFDVQSLRGNIDTRLKKLESGIYDGIILAEAGLRRMGW-DIP 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ + F PS QGAI + + + +V INH T ER + + G C
Sbjct: 178 VHQLDTDHFCPSANQGAIAVVAKSGDES-ENVVSRINHPQTKIETEIERILIGNVGGGCI 236
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
I +A ++ VLA DG + V + + + + + K +
Sbjct: 237 VPIGAYAEFVNDEKIHIRSEVLALDGSHYVAVDDVISADNYKEEANELGEELVRKGGKKL 296
Query: 305 FN 306
Sbjct: 297 VQ 298
>gi|307331356|ref|ZP_07610476.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
gi|306882979|gb|EFN14045.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
Length = 329
Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 155/313 (49%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + +V P + ++ ++T GD + L +IGG G+F
Sbjct: 15 PLRLGTRRSALAMAQSGLVADLVREVTGRP---VELVEITTYGDT-SREHLAQIGGTGVF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+SGEID AVHS KD+PT GL+++A RED RD I+ + L
Sbjct: 71 VSALREALLSGEIDLAVHSLKDLPTAEPDGLRLAAIPRREDPRDALIARDGLTFAQLPPG 130
Query: 125 SVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
S IGT S RR A L + DI + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 131 SRIGTGSPRRAAQLNAWARAFGLDIETVPIRGNVDTRIGYVRSGRLDAVVLAAAGLIRLG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+L++ P+PGQGA+ +E ++ + I+ T +V ER+ LA L
Sbjct: 191 RIGEATELLDVGHVLPAPGQGALAVECAASSVALTARLAEIDDPYTRVAVTAERSLLAAL 250
Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRD 291
+ C + + A + G+V +DG ++S G +A ++GR+
Sbjct: 251 EAGCSAPVGALADLLADGQAVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPSEAGDLGRE 310
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 311 LAAEMLAKGAAGL 323
>gi|118376440|ref|XP_001021402.1| porphobilinogen deaminase family protein [Tetrahymena thermophila]
gi|89303169|gb|EAS01157.1| porphobilinogen deaminase family protein [Tetrahymena thermophila
SB210]
Length = 362
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 102/335 (30%), Positives = 161/335 (48%), Gaps = 30/335 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPL--------------- 43
++ + F+I +R S LAL+ +E L+ V + N ++P+
Sbjct: 16 LKNRKFKIASRSSQLALSQTYEVIDLLVGVKELGLTKENFEVVPISNAPGKNCTLKFKIN 75
Query: 44 ------STKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97
+ KGD+ L +GG G+FT+ +E +L++ D AVHS KD+PT + + L I
Sbjct: 76 ITNKQFTNKGDQNLKDPLYVMGGVGVFTKIVEVELLNKNGDIAVHSLKDLPTIIDERLFI 135
Query: 98 SAYLPREDIRDVFIS---HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154
A P + DV I H + LKDL SVIGTSSLRR L + + RG +
Sbjct: 136 GAVPPLKPRGDVVIFNEKHKGKELKDLPEGSVIGTSSLRRITNLKNRYPHLKYENIRGNL 195
Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA 214
TRL KL N + AI+LA AG+ RL + + + L EDF +PGQGA+ ++ ++ +A
Sbjct: 196 NTRLTKLENGQYDAIILAEAGVFRLGWIEKVGQFLKQEDFLYAPGQGALGVQCRADDKEA 255
Query: 215 QELVKVINHEDTWDSVNCERAFLAELDG---SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271
L+ IN ++ V+ ER FL +L+G CK IA + TL G V + +
Sbjct: 256 IALLSYINQKEPRIRVDAERQFLNKLEGVILGCKLPIAVHSEIIDQTLRLTGQVWSLEAD 315
Query: 272 IFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G+ D ++G ++ ++ +
Sbjct: 316 KTIREVIEGHISD-QDLGLKLSEKMKQAGAGEILE 349
>gi|256397425|ref|YP_003118989.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928]
gi|256363651|gb|ACU77148.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928]
Length = 317
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 154/305 (50%), Gaps = 7/305 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ R+GTR S LALA + +L + ++ ++T GD + L+ IGG G
Sbjct: 16 ERALRLGTRASTLALAQSGMVAEALTAAT---GRAVELVHVTTYGDT-SREALSVIGGTG 71
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + + +G++D AVHS KD+PT +GL ++A R + D ++ L DL
Sbjct: 72 VFVNALREAIYAGDVDFAVHSLKDLPTAAPEGLHLAAITERAAVNDALVARDGLKLADLP 131
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT + RR ALL R D+ ++ RG ++TR+N + + A+++A AG++RL +
Sbjct: 132 AGAKVGTGAARRMALLKMIRPDLEIVPIRGNVDTRVNHVRSGDLDAVVVALAGLQRLGRA 191
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E+ + PSPGQGA+ +E +P+ EL+ V++ T +V ER LA L+
Sbjct: 192 EEATEVFGPDVILPSPGQGALAVEC--KDPELAELLAVLDSPLTRAAVVAERTMLAVLEA 249
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + G A + L G+V G +S G + +GR AQ +
Sbjct: 250 GCSAPVGGHAIALDDNVLSLTGVVATVSGSRGLRLSHAGAVSEPEALGRRVAQALLADGA 309
Query: 302 KNVFN 306
+
Sbjct: 310 AELME 314
>gi|19551663|ref|NP_599665.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|62389318|ref|YP_224720.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|25453022|sp|Q8NT90|HEM3_CORGL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21323183|dbj|BAB97811.1| Porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|41324652|emb|CAF19134.1| PORPHOBILINOGEN DEAMINASE [Corynebacterium glutamicum ATCC 13032]
Length = 302
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 10/305 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA A R L + + + ++T GD N + E G G+F
Sbjct: 2 TLKIGTRGSKLATTQAGTIRDQLKHYGR----DAELHIVTTPGDV--NMSPVERIGVGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L SGE D AVHS KD+PT R D R+ I+ +L +L
Sbjct: 56 TQALRDVLHSGECDVAVHSMKDLPTATDP-RFHLVVPTRADSREALIARDGLTLAELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C
Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A G T+ V A DG S G+ +G AQ +
Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQLIDAGA 294
Query: 302 KNVFN 306
N+
Sbjct: 295 ANLLG 299
>gi|163787007|ref|ZP_02181454.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1]
gi|159876895|gb|EDP70952.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1]
Length = 526
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 153/308 (49%), Gaps = 10/308 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LA+ A +S L + H V++P+ + GD + ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSQLAMWQAKTVQSQLEHL----GHKTVLVPVKSTGDLVLDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++ +ID AVHS KD+PT L KG+ +A L R +I D + +
Sbjct: 56 TGIFTKTLDIAMLNEDIDIAVHSLKDVPTILPKGIVQAAVLKRGNINDTLVYKANEEFLS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179
A +VI T SLRR+A L +++ RG + +RL KL N +A + A AG+ RL
Sbjct: 116 -ARDAVIATGSLRRRAQWLNRYPTHTIVGLRGNVNSRLEKLETNEDWNAAIFAGAGLGRL 174
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+N+ P+P QGAI I ++ + + + IN E + ER FL
Sbjct: 175 GITPENS--INLHWMIPAPAQGAIMITALESDEETRAICAEINDEVSEICTTIEREFLNR 232
Query: 240 LDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C + I Y K + F G++L+ DG E ++ + + AA YI
Sbjct: 233 LEGGCTAPIGAICYINKEEEVNFKGVLLSKDGTKKIEYTKVVALDQKDELAKLAADYIIE 292
Query: 299 ISNKNVFN 306
K + +
Sbjct: 293 KGGKTLID 300
>gi|326383045|ref|ZP_08204734.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395]
gi|326198181|gb|EGD55366.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395]
Length = 315
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 144/310 (46%), Gaps = 15/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A + L H ++ +ST GD ++ + +IG G+F
Sbjct: 8 TIRIGTRGSLLATTQAQDIADRLTAA----GHPAELVIISTAGDT-SSAPVAQIG-VGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T I L SGE D A+HS KD+PT L ++A R D RD +S L +L
Sbjct: 62 TTAIRLALRSGECDVAIHSYKDLPTAPEDDLAMAAVPTRVDPRDALVSRDGMVLGELPSG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSS RR A L + + RG +++RL K+ + + AI++A AG+ R+ + V
Sbjct: 122 SVVGTSSPRRAAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAIVVARAGLVRIGRADV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L+ +P QGA+ +E ++ + ++ ++ T +V+ ERA LA L+ C
Sbjct: 182 VTEALDPLVMLSAPAQGALAVECRSDDAELVRILAELDDPSTRAAVDAERAVLATLEAGC 241
Query: 245 KSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A S L V A DG S G A +G+D A
Sbjct: 242 TAPVGALAEVVDSIDEDGRIFAELSLRAAVAAEDGSEVIRASVVGPVDRAAQLGKDLAAE 301
Query: 296 IRFISNKNVF 305
+ + +
Sbjct: 302 LLELGAAALV 311
>gi|213964237|ref|ZP_03392470.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno]
gi|213953127|gb|EEB64476.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno]
Length = 293
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 156/297 (52%), Gaps = 9/297 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L + ++ I+ + GD ++ L E+G G+
Sbjct: 2 KTIRIGTRDSELALWQAKTVQHQLEAL----GYSTEIVSTKSHGDIELSKPLYEMGVIGI 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L++GEID AVHS KD+PT L G+ + A L R + DV + S D+ +
Sbjct: 58 FTKALDIALLNGEIDIAVHSMKDVPTALPDGIVVGAVLKRGNPHDVLVYKGDLSFLDVEI 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ I TSSLRRKA L ++ + RG + TRL KL +N + + A AG++R+ K
Sbjct: 118 -ATIATSSLRRKAQWLHRYPHHNIENLRGNVNTRLQKLADNPWNGAIFAAAGLERIN--K 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + L ++ P+P QGAI + H +N Q ++ I+ +T+ + ERAFL L+G
Sbjct: 175 LPENHLRLDWMFPAPAQGAIMVTLHEDNVPLQGVLLRIHDGNTYVATQVERAFLRALEGG 234
Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + I FA G +YF G + + DGK + + + + G A+ ++
Sbjct: 235 CTAPIGAFAQYDGQQKVYFKGGLWSEDGKKAAVIEEILTQIN-EHTGEQLAEKVKSK 290
>gi|188589216|ref|YP_001922029.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska
E43]
gi|254800242|sp|B2UXC4|HEM3_CLOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188499497|gb|ACD52633.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska
E43]
Length = 290
Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats.
Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA S L I ++I+ T+GDR + +L +IGGKGLF
Sbjct: 4 LIIATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ +
Sbjct: 61 KDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E +I
Sbjct: 121 KVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDENLI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G C
Sbjct: 181 TDYFDPKEFLPAVSQGALGIECL-KDGDANKYFEALIDAEATLTVEAERSFMKELQGDCH 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ +G LY G + GKI + G + + I +G+ AQ I
Sbjct: 240 SLIGAYSEIQGDDLYMIG-IYDIGGKIVKKD-ILGCKTNNIELGKKLAQKIL 289
>gi|251778553|ref|ZP_04821473.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082868|gb|EES48758.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 290
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA S L I ++I+ T+GDR + +L +IGGKGLF
Sbjct: 4 LIIATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ +
Sbjct: 61 KDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL + +I
Sbjct: 121 KVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDKNLI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G C
Sbjct: 181 TDYFDPKEFLPAVSQGALGIECL-KDGDANKYFEALIDAEATLTVEAERSFMKELQGDCH 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ KG LY G + GKI + G + + I +G+ AQ I
Sbjct: 240 SLIGAYSEIKGDDLYMIG-IYDIGGKIVKKD-ILGCKTNNIELGKKLAQKIL 289
>gi|67515679|ref|XP_657725.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4]
gi|40746143|gb|EAA65299.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4]
Length = 350
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 20/322 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F IGTR S LAL ++L + + P + I T GD+ T L + K
Sbjct: 14 SQKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTK 71
Query: 62 GLFTEEIEKKLISGEIDCAVHSAK---DMPTKLLKGLQISAYLPREDIRDVFISHTAQ-- 116
L+T+E+E L +G +D VHS K +PT L + + RED RD +
Sbjct: 72 NLWTQELEDLLEAGSVDLIVHSLKGISYVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPN 131
Query: 117 -SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAY 173
SL ++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++LA
Sbjct: 132 MSLAEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAA 191
Query: 174 AGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
AG+ RL I + L+ + + GQGA+ IE + ++++ I H++T +
Sbjct: 192 AGLLRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACL 251
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNG---NRC 283
ER+ L L+G C + + T L +V++ DG EV +G +
Sbjct: 252 AERSLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQ 311
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
A G A+ + +
Sbjct: 312 SAEEFGVTVAKALVNEGAGKIL 333
>gi|183980868|ref|YP_001849159.1| porphobilinogen deaminase HemC [Mycobacterium marinum M]
gi|238054421|sp|B2HRJ2|HEM3_MYCMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|183174194|gb|ACC39304.1| porphobilinogen deaminase HemC [Mycobacterium marinum M]
Length = 314
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 145/308 (47%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAATVRDALIAN----GHAAELVTISTLGDR--SSAPIETLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN+++N AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGIGTSGRARELGLAVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|220928704|ref|YP_002505613.1| porphobilinogen deaminase [Clostridium cellulolyticum H10]
gi|254800245|sp|B8I0Q8|HEM3_CLOCE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219999032|gb|ACL75633.1| porphobilinogen deaminase [Clostridium cellulolyticum H10]
Length = 293
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 88/293 (30%), Positives = 153/293 (52%), Gaps = 7/293 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKGL
Sbjct: 2 KKIRIGSRDSKLAIIQSEMVMAAIREF--DPDIELELITMKTTGDKILDKTLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E++ L + E+D VHS KDMP + L + A RED RD F+ + ++
Sbjct: 60 FVKELDYALYNNEVDITVHSYKDMPLEDNPKLPVVALSKREDPRDAFVLPQGEIAEN--- 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 117 NEPIGSSSQRRQLQLKALFPNRKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 176
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++++ P+ QG I ++ + + +K+ + E++ ER F+ E++G
Sbjct: 177 RISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISQAERTFVREMNGG 234
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + IA +A S + G+ + +G+R + + +G + + +
Sbjct: 235 CSTPIAAYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKM 287
>gi|187933878|ref|YP_001887094.1| porphobilinogen deaminase [Clostridium botulinum B str. Eklund 17B]
gi|254800243|sp|B2TPD7|HEM3_CLOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|187722031|gb|ACD23252.1| hydroxymethylbilane synthase [Clostridium botulinum B str. Eklund
17B]
Length = 290
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 105/292 (35%), Positives = 158/292 (54%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA L I ++I+ T+GDR + +L +IGGKGLF
Sbjct: 4 LIIATRKSKLAQVQTEIIMGKLKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ +
Sbjct: 61 KDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E +I
Sbjct: 121 KVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDENLI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G C
Sbjct: 181 TDYFDPKEFLPAVSQGALGIECL-KDGDANKYFEALIDAEATLTVEAERSFMKELQGDCH 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ +G LY G + GKI + G + + I +G+ AQ I
Sbjct: 240 SLIGAYSEIQGDDLYMIG-IYDIGGKIVKKD-ILGCKTNNIELGKKLAQKIL 289
>gi|87200799|ref|YP_498056.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM
12444]
gi|87136480|gb|ABD27222.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM
12444]
Length = 312
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 107/302 (35%), Positives = 160/302 (52%), Gaps = 4/302 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P ++GTR SPLA+A A E R+ L H + ++P++ GD+I +R L +IGGK
Sbjct: 7 QRPLKLGTRRSPLAMAQAEEARARLCAAHGWAESQVELVPVTASGDKIQDRPLADIGGKA 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
L+T+E++ L+SGEID AVHS KD+ T + I+A LPR D+RDV I A S+ +
Sbjct: 67 LWTKELDAWLVSGEIDFAVHSMKDVETIRPENFAIAAVLPRADVRDVLIG--AASIHAIP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL +
Sbjct: 125 PGARVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLAKLQAGEADVTLLAAAGLGRLGET 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V L+ ++ P+P QGAI IE + + I+ + T ++ ERA L L G
Sbjct: 185 GVG-HPLSEYEWLPAPAQGAIGIECLASRADLCAWLGAIDDKPTHHAIRAERALLLALGG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+C S IA S+L + + DG E D A + +
Sbjct: 244 NCHSPIAVLTTHHESSLTLRAALFSPDGAERVEAHETFAAGDDAGPAH-LAHRLLGEAPD 302
Query: 303 NV 304
+
Sbjct: 303 AI 304
>gi|158320361|ref|YP_001512868.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs]
gi|167008809|sp|A8MGE4|HEM3_ALKOO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158140560|gb|ABW18872.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs]
Length = 296
Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 7/293 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LA+ + ++ P I ++ + T GD ++TL +IGGKGLF
Sbjct: 2 KIRVGSRESKLAVKQSEIVIEAIRKY--DPNIEIELVTMKTTGDIKLDQTLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+++ L +D VHS KDMP + + L I A RED RDV + +++K+
Sbjct: 60 IKELDQALYDDRVDITVHSFKDMPMAIDEYLPIVAVSKREDPRDVLVLP--KTVKEPDFS 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG SS RRK L SV RG + TRL KL+ + AI LA AG+KRL E+
Sbjct: 118 KPIGCSSFRRKIQLQEIYPHCSVEPIRGNVLTRLEKLDRGEFSAITLALAGLKRLGLEER 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I I + + P+ QG I ++ + + ++ WD ER+F+ L+G C
Sbjct: 178 ISRIFEVTEILPAACQGVIVVQARKGFD--VSFLSDFHDKEAWDISMAERSFVRTLNGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S +A + K + L G+ + S + H+ + G R +G + A ++
Sbjct: 236 SSPVAAYGEIKDNYLTLTGLYVDSSNSV-HKKTITGARKQGEEMGFNLALQMK 287
>gi|320587748|gb|EFX00223.1| porphobilinogen deaminase [Grosmannia clavigera kw1407]
Length = 342
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 99/327 (30%), Positives = 150/327 (45%), Gaps = 25/327 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +GTR S LAL A ++L + P V+ T GDR L +G K
Sbjct: 3 SQAIIHVGTRSSALALKQAELVVAALEKAN--PHVKFVVDARETAGDRDKVTPLPNLG-K 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
GL+T E E +L+ G++D VHSAKDMPT L G + A RED RD I + L
Sbjct: 60 GLWTTEFETRLVDGDLDLVVHSAKDMPTTLPVGCLLGAIPKREDPRDAVIFPPGSAYKVL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN---------KAHAI 169
DL + S++GTSS+RR A L R + D RG I+TRL KL+ + I
Sbjct: 120 ADLPVGSIVGTSSVRRSAQLRRRFPGLEFRDLRGNIDTRLRKLDAPVPGPDGTTVRYDCI 179
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDF--PPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
+LA AG+ R+ I ++L+ + GQGA+ +E + K L++ I + T
Sbjct: 180 ILAAAGLIRMGFNDRISQLLDSASSGTLYAVGQGAMAVEIRNGDAKTLALLEPIIDKPTM 239
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNG-- 280
+ ERA + L+G C I + + T L +++ DGKI +
Sbjct: 240 LACLAERAVMRALEGGCSVPIGVESAWEAETAASPRLKLQATIVSLDGKIGIDAELTAMV 299
Query: 281 -NRCDAINIGRDAAQYIRFISNKNVFN 306
+A +G A+ + + + +
Sbjct: 300 TTPQEADALGLKVAEDMIGSGAQKILD 326
>gi|145294537|ref|YP_001137358.1| porphobilinogen deaminase [Corynebacterium glutamicum R]
gi|158513580|sp|A4QB59|HEM3_CORGB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23507698|gb|AAN38291.1| porphobilinogen deaminase [Corynebacterium glutamicum]
gi|140844457|dbj|BAF53456.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 302
Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 10/305 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA A R L + + ++T GD N + E G G+F
Sbjct: 2 TLKIGTRGSKLATTQAGTIRDQLK----YFGRDAELHIVTTPGDV--NMSPVERIGVGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L +GE D AVHS KD+PT R D R+ I+ +L +L
Sbjct: 56 TQALRDVLHAGECDVAVHSMKDLPTAADP-RFHLVVPTRADSREALIARDGLTLAELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C
Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A G T+ V A DG S G+ +G AQ +
Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQLIDAGA 294
Query: 302 KNVFN 306
N+
Sbjct: 295 ANLLG 299
>gi|325967722|ref|YP_004243914.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28]
gi|323706925|gb|ADY00412.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28]
Length = 305
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 8/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S L+L + L V P +I + T GD + ++ L IG KG+F
Sbjct: 2 KIRIATRGSRLSLIQSDIVMRMLRRVE--PNIQFEVIIIRTTGDLVQDKPLYAIGTKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SLKDLA 122
+E+ L+ E D AVHS KD+P+++ GL I+ + PR+ DV + L L
Sbjct: 60 EKEVNLALLKDEADIAVHSLKDLPSEISPGLVIAGFSPRDPPFDVLVVRNDYPSDLMALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179
+ +GTSS+RR+A LL R DIS+ RG ++TR+NKL A+++A AG+ RL
Sbjct: 120 SGAKVGTSSVRRRAFLLSVRKDISINVIRGNVDTRINKLIRGDYDAVVIAEAGLVRLIND 179
Query: 180 -KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
K + + ++ PP+PGQG I + T + +L++ + ERAFL
Sbjct: 180 MKSLHIRYARIPLDLLPPAPGQGIIAVVTREKDTNLIDLLRKASDPKAMVEALAERAFLR 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+ G C + G A G+ + F + +G V + D +G +AA +
Sbjct: 240 TVGGGCHVPVGGIAIYDGNYMEFIAGIADINGNRKVIVKIRDSSIDPERLGINAAHELLR 299
Query: 299 I 299
Sbjct: 300 Q 300
>gi|257791816|ref|YP_003182422.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243]
gi|257475713|gb|ACV56033.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243]
Length = 327
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 15/314 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L P ++ + + TKGDRI L++IG KGLFT
Sbjct: 4 MRIGTRGSKLALWQAHHVADLLRAA--SPGMDVSVEVVKTKGDRILGVALSKIGDKGLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L G +D VHS KD+PT L +GL ++ L R D RDV ++ + + L S
Sbjct: 62 KELEQALFDGRVDVCVHSMKDVPTALPEGLALAGCLIRADARDVLVAASGTTFAGLPAGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT +LRR + L R D+ ++ RG ++TR+ K+ + A++LA AGI+R+ +
Sbjct: 122 RVGTGALRRLSQLRAVRDDLDYVEVRGNLDTRIAKVRDGALDAVVLAAAGIERMGWSAEV 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E +++ P+ GQGAI +E ++ + + T V ER + LDG C+
Sbjct: 182 AEAFSVDTVVPAVGQGAIGLEVRADDERTARACAQVRCAATDACVAAERHVMRALDGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE-------------VSRNGNRCDAINIGRDA 292
I +A + L V + DG + +A + + A
Sbjct: 242 VPIGAYARYEEGLLVLDAFVGSLDGSHVLRSRLSAASQPPNDTDAVEAAVREARALAQRA 301
Query: 293 AQYIRFISNKNVFN 306
+ + V +
Sbjct: 302 VEEFEAQGARAVLD 315
>gi|310780153|ref|YP_003968485.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926]
gi|309749476|gb|ADO84137.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926]
Length = 303
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 153/305 (50%), Gaps = 6/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEI 58
M+K IGTR S LA+A + RS L + K P I + T GD N ++
Sbjct: 2 MKKNKVVIGTRGSLLAVAQSKHVRSMLKE--KYPEIEFEIKEIVTTGDVDLRTNWNNSDT 59
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K LFT+EIEK+L+ G I AVHS KDMP + GL + RED RDV +S + L
Sbjct: 60 SLKSLFTKEIEKELLDGTIHLAVHSMKDMPAESPAGLICGSIPEREDYRDVVVSKSNLKL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L SV+GTSSLRR + R D+ + RG I TRL KL AI+LA AG+KR
Sbjct: 120 SELPEGSVVGTSSLRRTMAVKEMRPDLVIEPIRGNIHTRLRKLKEENFDAIVLAAAGLKR 179
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E I + L + P+P QGA+CI+ ++ +E++ I ++ + V ER F
Sbjct: 180 VGLENEITQYLETHEMMPAPAQGALCIQCKEDDLFIREILSSITEKEVEEVVEIEREFSR 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + A G + G+ ++ ++ G R + ++ + A IR
Sbjct: 240 IFDGGCHTPMGCSAEIIGDEICLKGMYCHE--EVVYKGEVTGKREEGKSLAQKLAGIIRG 297
Query: 299 ISNKN 303
++
Sbjct: 298 QIDEQ 302
>gi|262201010|ref|YP_003272218.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247]
gi|262084357|gb|ACY20325.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247]
Length = 313
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 15/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A +L + H ++ + T GD + + EIG G+F
Sbjct: 8 PIRIGTRGSLLATTQAQTIADALTEA----GHPAELVIIRTAGD-DSAAPVAEIG-VGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T I L + E+D AVHS KD+PT GL I+A PRED RD +S L +L
Sbjct: 62 TTAIRIALHNREVDVAVHSYKDLPTADEPGLYIAAVPPREDPRDALVSRDNMVLGELPPG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGTS+ RR A L + + RG +++RL K+ + + A+++A AG+ R+ +
Sbjct: 122 STIGTSAPRRVAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAVVVARAGLVRIGRADE 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E + P+P QGA+ +E ++ + ++ ++ E T +++ ERA LA L+ C
Sbjct: 182 VTESFDPVVLLPAPAQGALAVECRSDDAQLVRILAELDDESTRAAIDAERAVLAALEAGC 241
Query: 245 KSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ I A S L V A DG S G A +G D A
Sbjct: 242 TAPIGAIAEVVESIDDDGRIFAELSLRAAVAAEDGSDVIRASVVGPVDRAAQLGADLAAE 301
Query: 296 IRFISNKNVF 305
+ + ++
Sbjct: 302 LLELGAGDLV 311
>gi|118619687|ref|YP_908019.1| porphobilinogen deaminase [Mycobacterium ulcerans Agy99]
gi|158512390|sp|A0PW29|HEM3_MYCUA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118571797|gb|ABL06548.1| porphobilinogen deaminase HemC [Mycobacterium ulcerans Agy99]
Length = 314
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 95/308 (30%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAAIVRDALIAN----GHAAELVTISTLGDR--SSAPIETLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A + + RG ++TRLN+++N AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQFRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGIGTSGRARELGLAVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|294630701|ref|ZP_06709261.1| porphobilinogen deaminase [Streptomyces sp. e14]
gi|292834034|gb|EFF92383.1| porphobilinogen deaminase [Streptomyces sp. e14]
Length = 326
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 29/324 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA+A + + ++ V P + ++ ++T GD + L +IGG G+F
Sbjct: 1 MRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGDT-SREHLAQIGGTGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L GE+D AVHS KD+PT L ++A RED RDV ++ A DL +
Sbjct: 57 AALREALARGEVDFAVHSLKDLPTAQPAELVLAAIPEREDPRDVLVARDALKFADLPRGA 116
Query: 126 VIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+GT S RR A L DI + RG ++TR+ ++ + A++LA AG+ R+ +
Sbjct: 117 RVGTGSPRRMAQLNAYARAHGLDIETVPIRGNVDTRIGFVHGGELDAVVLAAAGLNRIGR 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + L+++ P+PGQGA+ IE + + ++ T +V ER+ LA L+
Sbjct: 177 GDEVTDFLSVDTVLPAPGQGALAIECAADRADLVAALAELDDPHTRAAVTAERSLLAALE 236
Query: 242 GSCKSAIAGFAYCKG-----------------STLYFYGIVLASDGKIFHEVSRNGNR-- 282
C + + A + G+V +DG ++S G
Sbjct: 237 AGCSAPVGALADLPPLSAPLERAEPQADRQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPR 296
Query: 283 --CDAINIGRDAAQYIRFISNKNV 304
DA+ +GR+ A + +
Sbjct: 297 THDDAMALGRELATEMLARGAAGL 320
>gi|88802327|ref|ZP_01117854.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P]
gi|88781185|gb|EAR12363.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P]
Length = 531
Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 10/304 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K RIGTR S LAL A + R L + + V++P+ + GD + L E+G G
Sbjct: 2 QKIIRIGTRDSQLALWQANKVRKELAGL----GYESVLVPIKSSGDINLDTPLYEMGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L+ G+ID AVHS KD+PT L KG+ +A L R + DV + + +
Sbjct: 58 IFTKSLDIALLEGKIDIAVHSLKDVPTALPKGIVQAAVLKRGNYNDVLVLNGTEEFFGEE 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKK 181
+I T SLRRKA+ L V RG ++TRL KL +K + + A AG++RL
Sbjct: 118 QG-LIATGSLRRKAMWLDRYPTHKVAPLRGNVQTRLEKLETSKTWNGAVFAAAGLERLGI 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+++ P+P QGAI I + + + INH +T V ER FL L+
Sbjct: 177 TPEDT--VDLPWMLPAPAQGAIMIAALEKDDFTLDACEQINHHETSVCVGVEREFLRLLE 234
Query: 242 GSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C + I AY + F ++L DG V++ + +D A Y+
Sbjct: 235 GGCTAPIGALAYVDARTDEVNFKAVLLKKDGSKKIRVAKTAKFGSHKFLAKDCADYVINR 294
Query: 300 SNKN 303
K
Sbjct: 295 GGKE 298
>gi|291528492|emb|CBK94078.1| porphobilinogen deaminase [Eubacterium rectale M104/1]
Length = 338
Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 141/309 (45%), Gaps = 41/309 (13%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL L + P + + + T GD + L +IG KG+F +E
Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI
Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------------------- 165
GT S RRK LL+ R D+ V+ RG I+TRL KL + +
Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEIADNTVNNNEIANEKQN 182
Query: 166 ------AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
I+LA AGIKR+ ++ I + + +D P+P QG + +E +N + +
Sbjct: 183 KYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAELMAKLD 242
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268
++ E T ER FL + G+C +A + K + L + +
Sbjct: 243 ALSDEKTNLCAGIEREFLKRIGGNCHLPVAAYCDIVSEKDCGNDSDKNNRLKLLAMFGSE 302
Query: 269 DGKIFHEVS 277
DGK
Sbjct: 303 DGKKLARTE 311
>gi|291525403|emb|CBK90990.1| porphobilinogen deaminase [Eubacterium rectale DSM 17629]
Length = 338
Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL L + P + + + T GD + L +IG KG+F +E
Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI
Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------------------- 165
GT S RRK LL+ R D+ V+ RG I+TRL KL + +
Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEKQN 182
Query: 166 ------AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K +
Sbjct: 183 KYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAKLD 242
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268
++ E T ER FL ++ G+C +A + K + L + +
Sbjct: 243 ALSDEKTNLCAGIEREFLKQIGGNCHLPVAAYCDIVSEKDRGNDSNKNNRLKLLAMFGSE 302
Query: 269 DGKIFHEVS 277
DGK
Sbjct: 303 DGKQLARTE 311
>gi|120401860|ref|YP_951689.1| porphobilinogen deaminase [Mycobacterium vanbaalenii PYR-1]
gi|158513128|sp|A1T3D3|HEM3_MYCVP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119954678|gb|ABM11683.1| hydroxymethylbilane synthase [Mycobacterium vanbaalenii PYR-1]
Length = 312
Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 149/310 (48%), Gaps = 14/310 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GD+ + + EIG G+FT
Sbjct: 2 IRIGTRGSLLATTQAGTVRDALIAA----GHDAELVIVSTEGDQRADAPIAEIG-VGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A RED RD ++ L +L S
Sbjct: 57 AALREAIADGLVDAAVHSYKDLPTAPDPRFMIAATPVREDARDALVARDGLVLGELPAGS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +
Sbjct: 117 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVARAGLARIGRLDAV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + +++ ++ DT ++ ER LAEL+ C
Sbjct: 177 TEALEPVQMLPAPAQGALAVECRAGDTALAQVLSQLDDADTRAAITAERTLLAELEAGCS 236
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V DG + G A +G A+ +
Sbjct: 237 APVGAIAEVVESIDEDGRVFEELSLRGCVATLDGSDVIRATGIGTPDRARELGLSVAEEL 296
Query: 297 RFISNKNVFN 306
+ +++ +
Sbjct: 297 FELGARDLLD 306
>gi|302541659|ref|ZP_07294001.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC
53653]
gi|302459277|gb|EFL22370.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC
53653]
Length = 311
Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT
Sbjct: 7 IRIVSRSSPMALAQVERVRTELAALR--PGIRTEVVPVTTSGDRWMGD-LSKLGGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L +
Sbjct: 64 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDQMPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL K+ A++LA +G++R+ +
Sbjct: 124 GTRIGTSSVRRVAQLAVTHPHVECVPMRGNANRRLEKMAAGDCDALMLAVSGLERIDRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI EIL +E P G G + ++ ++ E V + + W + ER L L G
Sbjct: 184 VISEILPVETMCPPIGAGVLGLQCREDDTTTIEAVAGLGDTEVWKEITAERMLLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 244 CNSPIAGYAKAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
V +
Sbjct: 304 EVID 307
>gi|326336014|ref|ZP_08202190.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691811|gb|EGD33774.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 308
Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 7/302 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RIGTR S LAL A + +S L + + ++P+ ++GD + L +G G
Sbjct: 2 KKTLRIGTRDSELALWQARKVQSLLEAL----GYPTTLVPVKSQGDLTLDIPLYTMGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV +
Sbjct: 58 VFTKVLDVAMLQGVIDIAVHSMKDVPTTLPKGIIKGAILKRANVQDVLVYKENLDFLS-H 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
H+ I T SLRRKA LR V + RG I TRL KL+ + + A A ++RL K+
Sbjct: 117 THATIATGSLRRKAQWLRRFPTHLVENLRGNINTRLEKLHKSPWQGAIFAAAALERLDKK 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+V ++ P+P QGAI + + + +E + +IN + T N ER FL L+G
Sbjct: 177 EVNA--FPLDWMTPAPAQGAIMVVSKAEDTYTKEALALINDQPTDIETNIERRFLKRLEG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + I A G T+ F G + + DGK EV + + D N A I
Sbjct: 235 GCTAPIGAKATLDGKTISFVGNLFSLDGKHAIEVKKTISLDDIENFPEACADEILLKGGA 294
Query: 303 NV 304
++
Sbjct: 295 DL 296
>gi|327400408|ref|YP_004341247.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6]
gi|327315916|gb|AEA46532.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6]
Length = 296
Score = 294 bits (754), Expect = 8e-78, Method: Composition-based stats.
Identities = 108/299 (36%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +GTR S LALA + + L + + I + T GD + +R L E G
Sbjct: 1 MPEK-IVVGTRGSKLALAQTEKVIAHLKA----EGYEVEIRIIKTPGDIMKDRPLHEFKG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F I++ L+ G+ID AVHS KD+P+K+ I+A L RE D F++ ++ +
Sbjct: 56 MGAFVRVIDEALVDGDIDIAVHSYKDVPSKI--NGVIAAVLERESPCDAFVTREGLTIDE 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +SV+GTSSLRR+A + R+R D+ + + RG ++TRL KL + AILLA AG+ RL
Sbjct: 114 LESYSVVGTSSLRRRAQIKRYRPDLKIENLRGNVDTRLRKLREKQYDAILLAEAGLIRLG 173
Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
EKV + LN E F PS QG I +ET LV +NH+ T ERA L E
Sbjct: 174 LNEKVRYQSLNPEIFVPSANQGIIAVETRKGEED---LVSFMNHKRTAVEAEVERAVLKE 230
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L C + +A G + Y VL+ DG V + AI A+ ++
Sbjct: 231 LGVGCAVPVGIYAKFDG-KIRLYCEVLSHDGSRAVRVEETLSPKTAIEEAIIIARELKK 288
>gi|149369456|ref|ZP_01889308.1| porphobilinogen deaminase [unidentified eubacterium SCB49]
gi|149356883|gb|EDM45438.1| porphobilinogen deaminase [unidentified eubacterium SCB49]
Length = 313
Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats.
Identities = 97/311 (31%), Positives = 149/311 (47%), Gaps = 18/311 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LAL A + L + + ++P+ + GD + ++ L E+G G
Sbjct: 2 NKVIRIGTRDSELALWQANTVKRQLESL----GYKTELLPVKSTGDLVLDKPLYEMGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ +++G +D AVHS KD+PT L KG+ +A L R DV ++ S D
Sbjct: 58 IFTKTLDVAMLNGTVDIAVHSMKDVPTALPKGIIQTAVLERAMTEDVLVT---TSEIDYT 114
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
I T SLRRKA L +V+D RG ++TRL KL +N + A AG+ RL+
Sbjct: 115 KPCTIATGSLRRKAQWLNRYPHHTVVDLRGNVQTRLQKLKDNPWDGAIFAKAGLDRLEYL 174
Query: 183 KVIKEILNIE---------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
EI + + P+P QGA+ I T N+ + V +N+ E
Sbjct: 175 N-NTEITSPDFSGTFENLSWMLPAPAQGAMVIVTLQNDDFTTKAVSKLNNTAADICTQIE 233
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
R FL +L+G C + I A + F G + + DGK EV + ++ + G DAA
Sbjct: 234 RDFLRKLEGGCTAPIGALAQVVEENIQFTGCLFSLDGKTKIEVEKTIDKNNNNG-GVDAA 292
Query: 294 QYIRFISNKNV 304
+ +
Sbjct: 293 IELLENDGAAL 303
>gi|238923292|ref|YP_002936807.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656]
gi|238874966|gb|ACR74673.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656]
Length = 338
Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL L + P + + + T GD + L +IG KG+F +E
Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI
Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------------------- 165
GT S RRK LL+ R D+ V+ RG I+TRL KL + +
Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEKKN 182
Query: 166 ------AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K +
Sbjct: 183 KYSEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAKLD 242
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268
++ E T ER FL ++ G+C +A + K + L + +
Sbjct: 243 ALSDEKTNLCAGIEREFLKQIGGNCHLPVAAYCDIVSEKDRGNDSNKNNRLKLLAMFGSE 302
Query: 269 DGKIFHEVS 277
DGK
Sbjct: 303 DGKQLARTE 311
>gi|284039864|ref|YP_003389794.1| porphobilinogen deaminase [Spirosoma linguale DSM 74]
gi|283819157|gb|ADB40995.1| porphobilinogen deaminase [Spirosoma linguale DSM 74]
Length = 309
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 162/304 (53%), Gaps = 8/304 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A ++ L ++ + TKGD + +R+L +IG KG+FT
Sbjct: 3 IRIGTRSSRLAVWQAEHIQALLEK----GGLTSELVLIETKGDLVLDRSLAKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E +L SG ID AVHSAKD+P+ L L I A+ RE DV +S
Sbjct: 59 QELEDQLRSGTIDIAVHSAKDLPSNLPADLHIIAFTEREPANDVLVSRNKSLSLQGGESF 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A+L + ++ +D RG ++TR+ KL+ A+LLAYAG+ R+ + +I
Sbjct: 119 RIGTSSTRRVAMLKHYCPQLATVDMRGNLQTRIRKLDEGHCDALLLAYAGVHRMGYDDLI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVN---NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E L +++F P+ GQG+I IE + + A+ + ++INHE T + ERAFLA L+G
Sbjct: 179 VERLPLDEFTPAVGQGSIAIEVATDALKSDIAEAITRLINHEPTAACLRAERAFLARLEG 238
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C A T+ G +++ DG + +G+ ++ +G A+ I
Sbjct: 239 GCSIPSFALAQWTDDTTVSLTGGLVSLDGSQLLRETFSGSAQESHLLGHSLAEAILARGG 298
Query: 302 KNVF 305
+
Sbjct: 299 DTLL 302
>gi|315223357|ref|ZP_07865216.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287]
gi|314946688|gb|EFS98677.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287]
Length = 288
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 8/294 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A ++ L + + I+ + GD ++ L E+G G+F
Sbjct: 3 TIRIGTRDSELALWQAKTVQNQLKTL----GYATEIVSTKSHGDIELSKPLYEMGVTGIF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ ++ L++ EID AVHS KD+PT L +G+ + A L R + DV + S + A
Sbjct: 59 TKALDIALLNSEIDIAVHSMKDVPTALPEGIVVGAVLKRGNPHDVLVYKGDLSFLE-AEI 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K+
Sbjct: 118 VTIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERIN--KL 175
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ L ++ P+P QGAI + N Q+ + ++ + T+ + ER FL L+G C
Sbjct: 176 PEKHLVLDWMLPAPAQGAIVVVVREANVALQKKLLPLHDDYTYIATQLERDFLRALEGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+ I FA K LYF G + + DGK + + D G A +R
Sbjct: 236 TAPIGAFAEFKDDKLYFKGGLWSEDGKESSVIDEVLTQID-EYTGEKLATMVRS 288
>gi|332531340|ref|ZP_08407248.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624]
gi|332039204|gb|EGI75622.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624]
Length = 323
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 108/314 (34%), Positives = 161/314 (51%), Gaps = 25/314 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A + L H + ++ ++T+GD+I +R L+++GGKGLF
Sbjct: 5 LTIATRESRLALWQAEHVQGLLRQQ----GHAVTLLGMTTQGDQILDRALSKVGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++A L RED RD ++S L DL +
Sbjct: 61 KELEVALDEGRADLAVHSLKDVPMELPEGFVLAAVLEREDERDAWVSPHCAGLADLPSGA 120
Query: 126 VIGTSSLRRKALLLRW-----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
++GTSSLRR LL R D+ + RG ++TRL KL+ + HAI+LA AG+KRL
Sbjct: 121 IVGTSSLRRVVLLREALRALGRDDVRIEPLRGNLDTRLRKLDEGQYHAIVLAAAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVN----NPKAQELVKVINHEDTWDSVNCERAF 236
I++I E+ P+ GQGA+ IE ++ + + H+ TW V ERA
Sbjct: 181 LAARIRKIFTPEEMLPAAGQGALGIEIKHGATAQTAALEQALSNLAHQPTWLRVAAERAV 240
Query: 237 LAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFH-----EVSRNGNRCDA 285
+ GSC +A A KG+TL G++ E + +G DA
Sbjct: 241 SRAMGGSCSMPLAAHAAFVSSPAPKGATLRLRAAWGDVQGRLPLVQAQDEAAVHG-LDDA 299
Query: 286 INIGRDAAQYIRFI 299
+G A+ ++
Sbjct: 300 EALGLRVARQLQEA 313
>gi|239942156|ref|ZP_04694093.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 15998]
gi|239988619|ref|ZP_04709283.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 11379]
gi|291445603|ref|ZP_06584993.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998]
gi|291348550|gb|EFE75454.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998]
Length = 328
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 90/313 (28%), Positives = 152/313 (48%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + ++ +V + ++ ++T GD + L +IGG G+F
Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEAVREVT---GRAVELVEITTYGDT-SREHLAQIGGTGVF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L GE+D AVHS KD+PT L ++A RED RD ++ + + L
Sbjct: 70 VAALREALARGEVDFAVHSLKDLPTSQPDELVLAAVPQREDPRDALVARDGLTFEQLPDG 129
Query: 125 SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR A L + + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 130 ARIGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRLG 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + + L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA L
Sbjct: 190 RTGEVTDFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRVAVTAERALLAAL 249
Query: 241 DGSCKSAIAGFAY--CKG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291
+ C + + A G + L G+V ++DG ++S G DA +GR+
Sbjct: 250 EAGCSAPVGALADVLVDGHVVNELRLRGVVGSTDGSSLVQLSTTGPVPTSHDDAAALGRE 309
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 310 LASEMLAKGAAGL 322
>gi|329764682|ref|ZP_08256278.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138828|gb|EGG43068.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 308
Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 101/293 (34%), Positives = 156/293 (53%), Gaps = 4/293 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S L+LA S L + P + I + TKGD R L I KG+F +E
Sbjct: 2 IGARGSQLSLAQTKLVISELKKI--TPDVDFEIKSIKTKGDTDA-RPLFTIDQKGIFEKE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I++ + GE+D AVHS KD+P++L++ L +++ RE + D+FIS +L + +VI
Sbjct: 59 IDRAVADGEVDFAVHSLKDVPSQLVENLTLASIPKREMVNDIFISSDGTTLDSIKSGAVI 118
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR + R RSD++V RG IETR+ K+ + I+LA AGI RL V
Sbjct: 119 GTSSLRRAVQITRKRSDVTVRPIRGNIETRIKKVTDKIFDGIVLAQAGISRLGI-DVQYT 177
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+I+DF PSPGQGA+ I + + ++K I D+ + ER+ +D C+
Sbjct: 178 PLSIQDFSPSPGQGALAIVSRKDESSTISMLKKIEDTDSRLEIEAERSLSDFVDSGCRFP 237
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
I +A G+ + + DGK V ++G++ D ++G+ + +
Sbjct: 238 IGAYAKSNGNQMTLSVSAFSVDGKKSLFVEKSGDKNDPFSLGKSVGEELHKKG 290
>gi|223939088|ref|ZP_03630972.1| porphobilinogen deaminase [bacterium Ellin514]
gi|223892248|gb|EEF58725.1| porphobilinogen deaminase [bacterium Ellin514]
Length = 332
Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 106/332 (31%), Positives = 160/332 (48%), Gaps = 40/332 (12%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG- 60
KP I TR S LALA A S P +I + + T GD++ +L + G
Sbjct: 5 NNKPIFIATRGSALALAQANAVLSQCRSA--FPKLDIELKIIKTTGDKLQKASLAKEGES 62
Query: 61 --KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KGLFT+E+E L++G+ D AVHS KD+PT+L GL + A R D+RDV + A+ L
Sbjct: 63 LPKGLFTKELEVALLNGDADIAVHSLKDLPTELPTGLILGAVSKRADVRDVLVYRDAEYL 122
Query: 119 ------------------KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
KD + + TSS RRKA LL R D++V++ RG + TRL K
Sbjct: 123 RSQPGKSNRRGFTPKLAIKDFPPGATVATSSTRRKAQLLAQRGDLNVVEIRGNVATRLEK 182
Query: 161 LNNN-KAHAILLAYAGIKRLKK--------------EKVIKEILNIEDFPPSPGQGAICI 205
L N + A +LA AG++RL E ++ IL+ + P GQ A+ +
Sbjct: 183 LANQPELDATVLAAAGLERLNFKITAEGKLAGEGIPEGLLATILDFDVMLPCVGQAALGM 242
Query: 206 ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265
E N+ + QE+ +NH +T V ER+FL+ + G C+S +A +A G L
Sbjct: 243 EIRENDARIQEICDRLNHPETHACVLAERSFLSGMGGGCQSPVAAYAEIAGDQLQMRAAS 302
Query: 266 LASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ +A+ +G++ A ++
Sbjct: 303 FRE--TSARRAVGGKSINEAVALGQELAAKLK 332
>gi|134103372|ref|YP_001109033.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
gi|291004409|ref|ZP_06562382.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
gi|133915995|emb|CAM06108.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
Length = 315
Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 151/312 (48%), Gaps = 19/312 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LA+A +L + ++ +ST GDR + + EIG G
Sbjct: 2 NKTLRIGTRGSALAMAQTSWVAEALEKA----GYRTELVTVSTPGDR-SMAPIAEIG-VG 55
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L
Sbjct: 56 VFTSALRDALADGEVDVAVHSYKDLPTAPDPRLSLAAVPVREDPRDALVARDGLTLGELP 115
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT S RR L + V D RG ++TR+ K+ + + A++LA AG+ R+ +
Sbjct: 116 PGSVVGTGSPRRAGQLKALGLGLEVRDIRGNVDTRMRKVTDGELDAVVLARAGLARVGRL 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELD 241
I E L+ P+P QGA+ +E V++ + L++ V++ + + +V ERA LA L+
Sbjct: 176 AGITETLDPLQMLPAPAQGALAVECRVDDVDTEHLLQSVLDDQASRVAVAAERAMLAALE 235
Query: 242 GSCKSAIAGFAYCKGS---------TLYFYGIVLASD--GKI-FHEVSRNGNRCDAINIG 289
C + + A L+ G+V D G++ S G A +G
Sbjct: 236 AGCSAPVGALAEVVEDLDADGRVAQRLFVRGVVAVDDASGRVDLLRASVTGETTAAEQLG 295
Query: 290 RDAAQYIRFISN 301
R+ A +
Sbjct: 296 RELAAQLLDARA 307
>gi|254390668|ref|ZP_05005882.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294812261|ref|ZP_06770904.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064]
gi|326440901|ref|ZP_08215635.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197704369|gb|EDY50181.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294324860|gb|EFG06503.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064]
Length = 311
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E + RI +R SP+ALA R+ L P ++P++T GDR L +GGK
Sbjct: 3 ETEVMRIVSRSSPMALAQVERVRAELAVAR--PGVRTEVVPVTTSGDRWMGD-LAALGGK 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLK 119
G FT+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L
Sbjct: 60 GAFTKEVDAALLAGEADLAVHCMKDVPADRPLPAGTTFAAFLRRDDIRDALVHPGGLTLD 119
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + IGTSS+RR A L + + RG RL KL A A+LLA +G++R+
Sbjct: 120 ELPDGTRIGTSSVRRIAQLASSHPQLECVPMRGNANRRLEKLAAGDADALLLAVSGLERI 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ VI E+L+ + P G G + ++ + + + V + T V ER L
Sbjct: 180 GRTDVISEVLSADVMCPPIGAGVLALQCREEDEETIDAVSGLGDPATHREVTAERMLLHV 239
Query: 240 LDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C S IAG+A + G L V DGK D +G A +
Sbjct: 240 LQGHCNSPIAGYARAERGGELSLRAKVFTPDGKRVLNAHEWAGPLDPATLGTSVAVALLR 299
Query: 299 ISNKNVFN 306
+ + +
Sbjct: 300 QGARELID 307
>gi|182437949|ref|YP_001825668.1| porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778585|ref|ZP_08237850.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1]
gi|178466465|dbj|BAG20985.1| putative porphobilinogen deaminase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326658918|gb|EGE43764.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1]
Length = 328
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 151/313 (48%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + ++ +V + ++ ++T GD + L +IGG G+F
Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEAVREVT---GRAVELVEITTYGDT-SREHLAQIGGTGVF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GE+D AVHS KD+PT L ++A RED RD I+ + L
Sbjct: 70 VAALREALVRGEVDFAVHSLKDLPTFQPDDLVLAAVPQREDPRDALIARDGLTFGQLPEG 129
Query: 125 SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +GT S RR A L + + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 130 ARVGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRLG 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA L
Sbjct: 190 RSGEVTEFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRAAVTAERALLAAL 249
Query: 241 DGSCKSAIAGFAY--CKG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291
+ C + + A G + L G+V +DG ++S G DA IGR+
Sbjct: 250 EAGCSAPVGALADLLVDGQVVNELRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAAIGRE 309
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 310 LAAEMLAKGAAGL 322
>gi|256826210|ref|YP_003150170.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547]
gi|256689603|gb|ACV07405.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547]
Length = 358
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 36/334 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + +L H + ++ ++T+GD L+ IGG
Sbjct: 12 QGRVVRLGTRRSDLATTQSTHVADALRAR----GHEVELVLVTTEGDVNR-APLSRIGGT 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L++GEID AVHS KD+P + L I+A RED RD ++ +L+ L
Sbjct: 67 GVFVSALRDALLAGEIDIAVHSLKDLPVAQPQELVIAAVPEREDPRDALVARDGLTLETL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT S RR+A L R D+ V+D RG + RL + + A++LA AG++RL
Sbjct: 127 PAGARVGTGSPRREAQLRVARPDLEVVDLRGNVPRRLATVAEGELDAVVLAGAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + + L + P+PGQGA+ +E ++ ++ +++ ++H T + ERA L L+
Sbjct: 187 TEHVTQWLEPQVMVPAPGQGALAVECRSDDAESIAMLEPLDHLPTRTATTAERAVLGTLE 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--------------------------- 274
C + I A G+ + DG
Sbjct: 247 AGCSAPIGALARHDGARVDLMTFAGPRDGSRALLEADCARGVPAGHPADTPDDTPADTPD 306
Query: 275 ---EVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R A +GR A+ +R +V
Sbjct: 307 DSRNDDRVALDTAARELGRRVAEALRG-GGADVL 339
>gi|240171918|ref|ZP_04750577.1| porphobilinogen deaminase [Mycobacterium kansasii ATCC 12478]
Length = 317
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 143/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAATVRDALIAN----GHPAELVTISTAGDR--SSAPIETLGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR D RD ++ L +L S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAEDPRFTIAAIPPRNDPRDAVVARDGLVLGELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAADHRLAAVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGVGTSGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|158317872|ref|YP_001510380.1| porphobilinogen deaminase [Frankia sp. EAN1pec]
gi|158113277|gb|ABW15474.1| porphobilinogen deaminase [Frankia sp. EAN1pec]
Length = 354
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 40/337 (11%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ ++P R+GTR S LA A + + +L P + ++P+ T GD+ +++IGG
Sbjct: 15 LARRPLRLGTRRSALARAQSEKVAETLRTRLSRP---VELVPIVTAGDQSQ-VAISQIGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L++GEID AVHS KD+PT GL ++A R D RDV +S + + L +
Sbjct: 71 TGVFVSALRDALLAGEIDLAVHSLKDLPTATPDGLVLAAVPRRADTRDVLVSPSGRRLSE 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A LL V+ RG ++TR+ K + + A++LA+AG+ RL
Sbjct: 131 LGPGARVGTGSPRRAAQLLALGHGFEVVPIRGNVDTRIKKAIDGEVDAVVLAHAGLDRLD 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIET-------------------HVNNPKAQELVK-V 220
+ + EI++ E P+PGQGA+ IE + EL++ V
Sbjct: 191 RLDAVTEIISPEVMLPAPGQGALAIECVRTPAGGGPAHDQTGPEAGRGFDEGLAELLRFV 250
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC------------KG----STLYFYGI 264
++ + +V ERAFLA ++ C + + A+ + +
Sbjct: 251 LDDATSSVAVRAERAFLAGIEAGCTAPVGALAHVLPGTDARLVAGGDDAPAVGEIRLRAV 310
Query: 265 VLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
V A DG G+ D +G+ A +
Sbjct: 311 VAAPDGGRVLRRELTGSAVDPEALGQRLADELLSAGA 347
>gi|304317047|ref|YP_003852192.1| porphobilinogen deaminase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778549|gb|ADL69108.1| porphobilinogen deaminase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 297
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 104/298 (34%), Positives = 152/298 (51%), Gaps = 10/298 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+GTR S LAL + + P I+ +STKGD + N L+EIGGKGL
Sbjct: 2 KKIRVGTRSSELALTQTLIVINEIKKYK--PNIEFEIVKISTKGDSVLNAPLSEIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE LI+ EID AVHS KDMP ++ L++ + RED RDVFIS + + DL
Sbjct: 60 FVKEIEDALINNEIDMAVHSMKDMPYEVPNDLKLLSVYRREDPRDVFISRS-EKFIDLKN 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR L R DI ++ RG I TR+ K++ I+LA +GIKRL E
Sbjct: 119 NARIGTSSLRRSVQLKNLRPDIEIVPIRGNIATRIKKMHELNLDGIVLAASGIKRLGLED 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+IK+ ++ P+P QG + +E + + E+ ++ T+ + ER + + G
Sbjct: 179 MIKDYFPVDLIVPAPCQGILAVEIRRDFEEEFFEIYPMLLDAKTFFESSAERKIMKKFGG 238
Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+CK + ++ K + DGK + G D IG + I
Sbjct: 239 NCKIPLGIYSEYKRNGNDDLITVRVSYY-KDGK-LIKGRETGLMRDIDKIGDRLVEKI 294
>gi|254292449|ref|YP_003058472.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814]
gi|254040980|gb|ACT57775.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814]
Length = 323
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 155/303 (51%), Gaps = 7/303 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IG R SPLA+ A + + ++ I I +T GD++ ++ L + GGK
Sbjct: 17 STQIVKIGARGSPLAVQQAEDFAARFKEIVGN-TVEIEIHTFTTSGDQLLDKRLQDAGGK 75
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT E++ +SG ID VHS KD+PT L GLQ+ YLPRED RD ++KDL
Sbjct: 76 GLFTRELDIAQLSGRIDIVVHSLKDVPTVLPDGLQMGCYLPREDPRDALFGKVG-NIKDL 134
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT+SLRR A L R D+ ++ FRG ++TRL KL +A A LLA AG+ RL
Sbjct: 135 PHGATLGTASLRRSAQALALRPDLKIVMFRGNVQTRLRKLEEGQADATLLAAAGLNRLGM 194
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+ P+ GQG +C N + I+ ++ + ERAFL L
Sbjct: 195 TDKAAGFMPKEEMLPACGQGIVCTTLTNNAEDWIFKACLQIDVLESRIAAIAERAFLKRL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDAAQYI 296
DGSC++ IAG + + G VLA DG + + A ++G + + +
Sbjct: 255 DGSCRTPIAGHLSFNETGVDMRGEVLADDGSKRWFSQMSLDTIPDENQAASLGFELGEKV 314
Query: 297 RFI 299
+
Sbjct: 315 AKL 317
>gi|330946190|ref|XP_003306713.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1]
gi|311315692|gb|EFQ85212.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1]
Length = 398
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 106/347 (30%), Positives = 150/347 (43%), Gaps = 47/347 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60
P IGTR S LA A SL D + P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVVVQGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116
K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYA 174
+L L ++IGTSS+RR A L + + D RG + TRL KL+ AI+LA A
Sbjct: 148 TLATLPQGAIIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLGKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDDAMKELMSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262
ERA L L+G C I KG L
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLAVGPQPAKDYDKHGNAIEEDEPDVDDQELVLR 327
Query: 263 GIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306
+V++ DGK E N +A +GR+ A+ + +
Sbjct: 328 AMVVSVDGKESVEYEATRKVRNAEEAEEMGREVAKVLIEKGADKILE 374
>gi|256380712|ref|YP_003104372.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827]
gi|255925015|gb|ACU40526.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827]
Length = 313
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 17/309 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LALA +L + I+ +ST GDR ++ + EIG G
Sbjct: 2 NRTLRIGTRGSALALAQTGTVAEALRAAGA----QVEIVTVSTPGDR-SHAPIAEIG-IG 55
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L
Sbjct: 56 VFTSALRDALAHGEVDVAVHSYKDLPTAPDTRLSLAAIPQREDPRDALVARDGLTLGELP 115
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S +GT S RR L + ++ RG I++R+ ++ + + A++LA AGI RL +
Sbjct: 116 PGSKVGTGSPRRATQLAALGLGLEILPIRGNIDSRMARVFDGELDAVVLARAGISRLGRV 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELD 241
+ I E+L+ P+P QGA+ IE V++ + L++ ++ + +V ERA LA L+
Sbjct: 176 ENITEVLDPIQMLPAPAQGALAIECRVDDVDTEHLLRSTLDDSASRAAVTAERAMLAALE 235
Query: 242 GSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
C + + A + G+V A DG S G+ A +GR
Sbjct: 236 AGCSAPVGALADVVEDLDDEGAAVLRISLRGVVAAEDGD-LLRASATGDLTAAEELGRAL 294
Query: 293 AQYIRFISN 301
A + +S
Sbjct: 295 AAELLDLSG 303
>gi|297543913|ref|YP_003676215.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841688|gb|ADH60204.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 299
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 9/298 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGKG
Sbjct: 2 KKVIKVGTRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 60 VFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL E
Sbjct: 120 EGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241
+I E + P+P QG + +E + QE I T+ + ER L
Sbjct: 180 SIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFG 239
Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+C+ +A + + D + G + + +
Sbjct: 240 VNCRQPFGAYAQYRKERDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEE 295
>gi|284034243|ref|YP_003384174.1| porphobilinogen deaminase [Kribbella flavida DSM 17836]
gi|283813536|gb|ADB35375.1| porphobilinogen deaminase [Kribbella flavida DSM 17836]
Length = 294
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 95/298 (31%), Positives = 148/298 (49%), Gaps = 10/298 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR S LA A A +L ++ H + ++P+ T GD L +IGG G+F
Sbjct: 2 IKLGTRRSALATAQAALVADALRNL----GHEVDLVPIVTTGDVNR-APLEQIGGTGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++GEID AVHS KD+PT + GL + A RED RDV ++ +L +L +
Sbjct: 57 SALRDALLAGEIDIAVHSLKDLPTAPVDGLTLGAIPVREDPRDVLVARDGLTLGELQTGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR A L + + RG ++TR+ + + K A++LA AG+ RL + I
Sbjct: 117 LVGTGSPRRVAQLEALGLGLELTGIRGNVDTRIAMVADGKVDAVVLARAGLARLGRLAEI 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+PGQGA+ IE ++ + ++ T +V ER LA L+ C
Sbjct: 177 TETLDPIQMLPAPGQGALGIECRSDDTAVLAALAPLDDPGTRAAVTAERQLLATLEAGCT 236
Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + A G L+ G + DG +S NG+ D +GR A +
Sbjct: 237 APVGALAEVVDGEDGPELWLRGALG-EDGGGVRRLSANGSVDDPAAVGRALANELLEQ 293
>gi|332519549|ref|ZP_08396016.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4]
gi|332045397|gb|EGI81590.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4]
Length = 527
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 163/307 (53%), Gaps = 9/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + H V++P+ + GD + ++ L E+G
Sbjct: 1 MS-KTIRIGTRDSELALYQANAVKSQLEHL----GHKTVLVPVKSTGDIVLDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT ++ +++G+ID AVHS KD+PT L KG+ +A L R ++RD + T +
Sbjct: 56 TGIFTRTLDIAMLNGDIDIAVHSLKDVPTLLPKGIVQAAVLKRGNVRDTLVYKTTEEFLG 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
A +VI TSSLRRKA L ++ D RG + TRL KL N ++ +A + A AGI RL
Sbjct: 116 -AREAVIATSSLRRKAQWLNRYPTHTIEDIRGNVNTRLEKLKNTSRFNAAIFAAAGIGRL 174
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +N+E P+P QGAI + + + + ++ INHE+T ER FL +
Sbjct: 175 GL--RPETAVNLEWMIPAPAQGAIMVTALEEDEETRAILAEINHEETQICTQIEREFLNK 232
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C + I Y K + F G++L+ +G V R + +I A Y+
Sbjct: 233 LEGGCTAPIGALCYIKDEEVNFEGVLLSPNGTKKITVQRVKKLGEHTDIATWCADYVIDK 292
Query: 300 SNKNVFN 306
K++ +
Sbjct: 293 GGKHLMD 299
>gi|257063872|ref|YP_003143544.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476]
gi|256791525|gb|ACV22195.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476]
Length = 318
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 98/310 (31%), Positives = 146/310 (47%), Gaps = 8/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ F IGTR S LAL ++M P + I +T GD L EIG
Sbjct: 1 MPER-FVIGTRGSKLALWQTETVGRAIMRA--FPEIEVEIRVRNTTGDINLASPLAEIGD 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117
KGLFT E+E L+ GE+D VHS KD+ T+ +G ++ LPR D RDV + A S
Sbjct: 58 KGLFTRELETDLLLGEVDMCVHSLKDLETEQPEGCVVAGVLPRADARDVLVCGPRIQAAS 117
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L ++ S IGT S RR A L ++ RG ++TR+ K + +LA AG+K
Sbjct: 118 LAEVPEGSRIGTGSRRRVAQLKANFPNMVPEGIRGNVDTRVAKAEGDDYEGAILAAAGMK 177
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I L IED P+PGQGAI +E N +A ++ + +N T + ER L
Sbjct: 178 RMGYEDHIAAYLPIEDMIPAPGQGAIAMEVLKKNERAYQIARALNDPVTKACTDAERFVL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNGNRCDAINIGRDAAQY 295
L+G C + I + F VL+ G + + + D +++ +
Sbjct: 238 FSLEGGCSAPIGAHCRLEDGKYIFDACVLSLGGTKAARCHLEADADSADPMDMAWEVVSE 297
Query: 296 IRFISNKNVF 305
+ + +
Sbjct: 298 LIGEGARAIL 307
>gi|288561002|ref|YP_003424488.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1]
gi|288543712|gb|ADC47596.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1]
Length = 289
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 95/293 (32%), Positives = 152/293 (51%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL R L + I + + TKGD+ITN L + KGLFT
Sbjct: 1 MIVGTRGSKLALVQTDYIRQCL---YNITGEEVEKNIIKTKGDKITNSQLYNMDSKGLFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ L+ E+D AVHS KD+PT+L + L+I A RE +V IS+ S +L S
Sbjct: 58 RELDNALLDEEVDFAVHSLKDVPTELNEDLEIVAVPIRESPNEVLISN--YSWSELEEGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A D + RG +ETR+ K+ + + A ++A AG+ RL +K I
Sbjct: 116 TLGTSSLRREAFCKHHNKDFELKPIRGNVETRIEKVMDGQVDATIMAEAGLNRLGLQKYI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K + P+ GQGA+ + T + + +E ++ +NH + V E+ L E+ C+
Sbjct: 176 KAKFPTDYIMPAAGQGALAVMTR-KDSEHKETIRKLNHYFSHQEVLAEKTILEEIGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
I + K + L I+L +G+I ++ + +G+ +A +G + +
Sbjct: 235 WPIGAISGIKNNQLELKSILLDKNGEILYQKTLSGSIREAKEMGVQIGKEMIE 287
>gi|20089471|ref|NP_615546.1| porphobilinogen deaminase [Methanosarcina acetivorans C2A]
gi|23821686|sp|Q8TT56|HEM3_METAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|19914376|gb|AAM04026.1| hydroxymethylbilane synthase [Methanosarcina acetivorans C2A]
Length = 317
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 152/300 (50%), Gaps = 9/300 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64
IGTR S LALA L + I + T GDR T+R L + GG G F
Sbjct: 1 MIIGTRGSQLALAQTENVARLLKER----GVETSIKIIKTSGDRFTDRPLHAVSGGVGAF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E++ +++GEID AVHS KDMPT +GL A L R+ D+ +++ +L +L
Sbjct: 57 VRELDDVMLAGEIDIAVHSMKDMPTIRPEGLPTVAVLKRDTPFDILLTYDGTTLDELPEQ 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++IGTSSLRR A + R+R D+ + RG I+TRL KL + ILLA AG++R+ E +
Sbjct: 117 AIIGTSSLRRTAQIRRYRPDLITQELRGNIDTRLRKLKEGQYDGILLAKAGLERMGWE-I 175
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
EIL+ + F PSP QG + + T +P+ + V ++H ++ ER ++EL G C
Sbjct: 176 DGEILSPDFFCPSPNQGTVAVVTRA-DPEIEAAVSGLDHTESRIVTEIERILISELGGGC 234
Query: 245 KSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+ I +A ++ VL+ DGK + + R+ + + K
Sbjct: 235 TTPIGSYAELTSDKQEIHIRAEVLSLDGKEDVRIDEFIPMLGGLEKARELGHRLVEMGGK 294
>gi|213406619|ref|XP_002174081.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275]
gi|212002128|gb|EEB07788.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275]
Length = 335
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 149/318 (46%), Gaps = 18/318 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GK 61
F +G+R S LAL L +++ P +N I+ T GD I N+ L E K
Sbjct: 10 TFPLGSRKSKLALIQTNLVLKQLKELY--PEYNFPILSRDTVGDEIINKALFEFKTQMAK 67
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+T E+E L+ GE VHS KD+PT L +G+ I+ R D + +S+
Sbjct: 68 SLWTRELEVLLMHGECRMLVHSLKDLPTDLPEGMTIACITRRSCPLDAVVMRAGSPYKSV 127
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176
+L +SV+GTSS+RR+A+L R + D RG + TRL KL ++ ++LA AG+
Sbjct: 128 SELPPNSVVGTSSIRRRAMLQRHFPHLKFRDIRGNVGTRLAKLDAPDSPFDCLILAAAGL 187
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + I ++L + GQGA+ +E ++ + EL+K + +T S ERA
Sbjct: 188 IRLNLKDRITQMLQAPFVFYAVGQGALAVEVRADDTEIIELLKPLQDMETTYSCLAERAL 247
Query: 237 LAELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINI 288
+ L G C I C ++ G+V++SDG S + DA +
Sbjct: 248 MKRLQGGCAIPIGVETQCLPLSKDKYSVVLQGMVVSSDGTRSAYASEFMEVSSEKDAEQL 307
Query: 289 GRDAAQYIRFISNKNVFN 306
G + A + +
Sbjct: 308 GMNVATALLKRGAGAILE 325
>gi|293402361|ref|ZP_06646498.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304208|gb|EFE45460.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 299
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 2/294 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ IGTR S LALA + + R+ L + + P H+ + ++TKGD + L ++ KG+F
Sbjct: 3 YIIGTRGSALALAQSEQVRTLLQNTY--PQHSFTLQIIATKGDLQQHVALDQMDAKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G+I AVHS KDMPT+L KGL + L RED RDVFIS T + +L +
Sbjct: 61 KEIEEALLAGKIHMAVHSLKDMPTQLPKGLCFTKTLLREDARDVFISRTKTAFHELGPQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT S RRK L++ R DISV+ RG ++TRL K+ + I+LA AG+KRL+ + +
Sbjct: 121 KIGTGSKRRKVQLMKLRPDISVVGIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLQVQGIS 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E P+ GQGA+ IE + ++ + + + ER FL +DG C
Sbjct: 181 YEYFPYTSMIPACGQGALAIEVKEQDATLLTMINALANTHIDQEIQIERTFLQAIDGGCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + + F + D + DA + +AA+Y+
Sbjct: 241 TPVGAHCKITEKEIVFDALYGNEDCSKMCNLHWRRPLTDAQQLPFEAAKYLIKA 294
>gi|166033239|ref|ZP_02236068.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC
27755]
gi|166027596|gb|EDR46353.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC
27755]
Length = 310
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 97/305 (31%), Positives = 147/305 (48%), Gaps = 13/305 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+R+GTR S LALA + L P ++ + T GD L +IG KG+F
Sbjct: 3 YRVGTRGSKLALAQTKQVIEKLKSA--FPEDEFDVVIIKTTGDMDQKSRLDQIGSKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++L+ +I AVHS KDMP GL + RED RDV I A S+ DL +
Sbjct: 61 KEIEEELLEEKIHLAVHSMKDMPDTTADGLIFAKAWKREDPRDVLILREAVSVDDLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT S RRK LL+ R D++++ RG ++TR+ K+ + I+LA AGI RL +E+ I
Sbjct: 121 VIGTGSKRRKYQLLKIRPDLNIVGIRGNVDTRIRKMQEEEMDGIVLAVAGINRLGREQEI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L + P+P QG + +E +N + + ++ ++T V ER FL ++ GSC
Sbjct: 181 TCYLEPDQMIPAPAQGTLALEVKADNIQLIRKLNRLSDQETDICVKAERQFLKQIGGSCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----------AINIGRDAAQ 294
+ + + L + DGK + I R+A +
Sbjct: 241 LPVGAYCKIQDEKLVLRAMFGTEDGKKMAYTKVESAVLNKIEDSSQIDEICRQIAREAVE 300
Query: 295 YIRFI 299
I+
Sbjct: 301 KIQMQ 305
>gi|15839903|ref|NP_334940.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551]
gi|253797442|ref|YP_003030443.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
1435]
gi|254363472|ref|ZP_04979518.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str.
Haarlem]
gi|308231570|ref|ZP_07412948.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001]
gi|308369414|ref|ZP_07417699.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002]
gi|308370431|ref|ZP_07421471.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003]
gi|308371690|ref|ZP_07425840.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004]
gi|308372913|ref|ZP_07430371.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005]
gi|308374024|ref|ZP_07434556.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006]
gi|308375179|ref|ZP_07442991.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007]
gi|308376421|ref|ZP_07438780.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008]
gi|308377443|ref|ZP_07479182.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009]
gi|308378656|ref|ZP_07483377.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010]
gi|308379797|ref|ZP_07487609.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011]
gi|308395586|ref|ZP_07492111.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012]
gi|13880040|gb|AAK44754.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551]
gi|134148986|gb|EBA41031.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str.
Haarlem]
gi|253318945|gb|ACT23548.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
1435]
gi|308216828|gb|EFO76227.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001]
gi|308327689|gb|EFP16540.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002]
gi|308332040|gb|EFP20891.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003]
gi|308335827|gb|EFP24678.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004]
gi|308339432|gb|EFP28283.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005]
gi|308343307|gb|EFP32158.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006]
gi|308347203|gb|EFP36054.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007]
gi|308351144|gb|EFP39995.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008]
gi|308355775|gb|EFP44626.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009]
gi|308359835|gb|EFP48686.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010]
gi|308363637|gb|EFP52488.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011]
gi|308367292|gb|EFP56143.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012]
gi|323721187|gb|EGB30249.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis
CDC1551A]
Length = 312
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 150/308 (48%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +G G+FT
Sbjct: 5 IRIGTRGSLLATTQAATVRDALIA----GGHSAELVTISTEGDR-SMAPIASLG-VGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + S
Sbjct: 59 TALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + +
Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ C
Sbjct: 179 TETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCS 238
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G+ A +G A +
Sbjct: 239 APVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAEL 298
Query: 297 RFISNKNV 304
+ + +
Sbjct: 299 FELGAREL 306
>gi|242827493|ref|XP_002488841.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC
10500]
gi|218712002|gb|EED11431.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC
10500]
Length = 413
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 103/339 (30%), Positives = 154/339 (45%), Gaps = 36/339 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT---LTEIGG 60
K R+G+R S +AL ++L H + S +GDR L + G
Sbjct: 72 KAVRVGSRNSKMALIQTSSVAAALYKAHHGF-FTFPVSTHSVQGDRDKTSAFRDLAKAHG 130
Query: 61 ---------KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111
K L+T EIE +L++G+ID VHS KD+PT L G +I A+ R D D +
Sbjct: 131 NKQTAADTAKSLWTLEIEARLLAGDIDLIVHSLKDVPTTLPDGCEIGAFPHRNDPTDALL 190
Query: 112 SH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKA 166
+SL++L SV+GT S+RR A L + + + + RG ++TR+ KL N++
Sbjct: 191 VKAGLPYKSLEELPAGSVVGTCSVRRTAQLRHYCPHLIIQECRGNVDTRVAKLDANDSPY 250
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
AI++A AGI RL E I + L+ + + GQGA+ IE + KA+ELV I+H T
Sbjct: 251 TAIVVAAAGIVRLNLEHRITQRLSGPAYTYAVGQGALGIEIRKEDQKARELVACIDHWPT 310
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCK---------------GSTLYFYGIVLASDGK 271
ERA L L G C + I + TLY G +L DG
Sbjct: 311 RVRCLAERALLRFLQGGCSAPIGVHSAFVRTPAKGEPNVNDNHYEGTLYLTGTLLHPDGG 370
Query: 272 IFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVFNF 307
+ G D+ IG+ + I + + +
Sbjct: 371 MEIRAHEKGQVKCTADSETIGKSVGKKILDLGGAQILDI 409
>gi|330470294|ref|YP_004408037.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032]
gi|328813265|gb|AEB47437.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032]
Length = 336
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 105/325 (32%), Positives = 169/325 (52%), Gaps = 24/325 (7%)
Query: 1 MEKK----PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56
M ++ P R+GTR S LA+A + +L P + ++ + T GDR ++ +
Sbjct: 1 MSQRQPSGPLRLGTRGSKLAMAQSGHVAEALTARTGRP---VELVEVITAGDR-SSAPVH 56
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
+G G+F + L++ EID AVHS KD+PT + GL I+A PRED RD ++ +
Sbjct: 57 RLG-VGVFVSALRDALVAREIDFAVHSYKDLPTAMPAGLHIAAVPPREDPRDALVARDGR 115
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174
+L +LA + IGT +LRR A L +SV RG I+TRL ++ + AI+LA A
Sbjct: 116 TLAELAPGASIGTGALRRIAQLHALGMQLSVSPIRGNIDTRLARVLGPDADLDAIVLARA 175
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R+ + VI E L+ P+P QGA+ +E V++P+ EL+ ++H + +V ER
Sbjct: 176 GLARIGRLDVITETLDPMLMLPAPAQGALAVECRVDDPEMVELLGTLDHAASRATVTAER 235
Query: 235 AFLAELDGSCKSAIAGF----------AYCKGS---TLYFYGIVLASDGKIFHEVSRNGN 281
A LA L+ C + +A + + +G +Y G V++ DG +SR G
Sbjct: 236 AMLATLEAGCSAPVAAYAVVAEGEPTGSGVEGDVVQEIYLRGAVISPDGSRDIRLSRTGT 295
Query: 282 RCDAINIGRDAAQYIRFISNKNVFN 306
DA IG+ A + + ++
Sbjct: 296 LADAAEIGKALATELLDLGADSILG 320
>gi|323305779|gb|EGA59518.1| Hem3p [Saccharomyces cerevisiae FostersB]
Length = 275
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 129/274 (47%), Gaps = 13/274 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + K P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ K I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYG 263
ERA + L+G C I + T + G
Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKITIKG 272
>gi|119174394|ref|XP_001239558.1| hypothetical protein CIMG_09179 [Coccidioides immitis RS]
Length = 331
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LAL R++L P + GD L K
Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQAA--FPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + +L
Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPSACVLAAVMKRENPRDVLVLKKGLPSMTL 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL + ++LA AG+
Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R +E I + L+ + + GQG + IE ++ ++++ I T + ER
Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYTCLAER 242
Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
+ L L+G C + + L IV + DGK E+ +GN A
Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGNVQSDEAAE 302
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G++ A + +
Sbjct: 303 TFGKEVALKLVARGAGKILE 322
>gi|184200499|ref|YP_001854706.1| porphobilinogen deaminase [Kocuria rhizophila DC2201]
gi|183580729|dbj|BAG29200.1| porphobilinogen deaminase [Kocuria rhizophila DC2201]
Length = 314
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 13/310 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M F +GTR S LA+ + ++ + ++ + T+GD + L+++GG
Sbjct: 1 MSGAVFTVGTRGSQLAMTQSRWAAEAVSRAG---GIDHELVTVRTEGD-VLTGPLSQMGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + +++ G +D AVHS KD+PT ++GL+I A RED RD + +L +
Sbjct: 57 TGVFATALRSQVLDGRVDLAVHSLKDLPTAPVEGLRIVALPEREDPRDALCARDGLTLAE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---NNNKAHAILLAYAGIK 177
L + +GT S RR A L R D+ ++D RG + TRLN++ + A++LA +G+K
Sbjct: 117 LPEGAAVGTGSPRRVAQLRALRPDLRIVDIRGNVGTRLNRVAPADPGDLDAVVLAASGLK 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVN---NPKAQELVKVINHEDTWDSVNCER 234
RL E I E L+ P+PGQGA+ +E + ++ ++H T +V ER
Sbjct: 177 RLGLEGRITEYLDPHVMLPAPGQGALALEVSARLDPSGALMRGLEAVDHLPTRLAVTAER 236
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRD 291
A LA+L+ C + + FA G L +V DG S + +A GR
Sbjct: 237 AVLAQLEAGCAAPVGTFARVAGDVLELDVVVANPDGSEVMRRSESVPAPSVEEAEAFGRR 296
Query: 292 AAQYIRFISN 301
A +
Sbjct: 297 IADDLLAQGA 306
>gi|15607651|ref|NP_215024.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Rv]
gi|31791692|ref|NP_854185.1| porphobilinogen deaminase [Mycobacterium bovis AF2122/97]
gi|121636428|ref|YP_976651.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660279|ref|YP_001281802.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|148821712|ref|YP_001286466.1| porphobilinogen deaminase [Mycobacterium tuberculosis F11]
gi|167970665|ref|ZP_02552942.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|215402275|ref|ZP_03414456.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|215410034|ref|ZP_03418842.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|215425741|ref|ZP_03423660.1| porphobilinogen deaminase [Mycobacterium tuberculosis T92]
gi|215429335|ref|ZP_03427254.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|215444616|ref|ZP_03431368.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|218752147|ref|ZP_03530943.1| porphobilinogen deaminase [Mycobacterium tuberculosis GM 1503]
gi|219556337|ref|ZP_03535413.1| porphobilinogen deaminase [Mycobacterium tuberculosis T17]
gi|224988900|ref|YP_002643587.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172]
gi|254230857|ref|ZP_04924184.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C]
gi|254549461|ref|ZP_05139908.1| porphobilinogen deaminase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185382|ref|ZP_05762856.1| porphobilinogen deaminase [Mycobacterium tuberculosis CPHL_A]
gi|260199512|ref|ZP_05767003.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|260203666|ref|ZP_05771157.1| porphobilinogen deaminase [Mycobacterium tuberculosis K85]
gi|289441896|ref|ZP_06431640.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|289446056|ref|ZP_06435800.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A]
gi|289552764|ref|ZP_06441974.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605]
gi|289568434|ref|ZP_06448661.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17]
gi|289573100|ref|ZP_06453327.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85]
gi|289744220|ref|ZP_06503598.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|289749005|ref|ZP_06508383.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92]
gi|289752545|ref|ZP_06511923.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|289756587|ref|ZP_06515965.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|289760632|ref|ZP_06520010.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503]
gi|294996019|ref|ZP_06801710.1| porphobilinogen deaminase [Mycobacterium tuberculosis 210]
gi|297632998|ref|ZP_06950778.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN 4207]
gi|297729974|ref|ZP_06959092.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN R506]
gi|298523991|ref|ZP_07011400.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|313657302|ref|ZP_07814182.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN V2475]
gi|54037281|sp|P64337|HEM3_MYCBO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54041348|sp|P64336|HEM3_MYCTU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158512923|sp|A1KFY6|HEM3_MYCBP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513358|sp|A5TZP0|HEM3_MYCTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800256|sp|C1AKJ0|HEM3_MYCBT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3261607|emb|CAB00957.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE
SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE)
[Mycobacterium tuberculosis H37Rv]
gi|31617278|emb|CAD93385.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE
SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE)
[Mycobacterium bovis AF2122/97]
gi|121492075|emb|CAL70538.1| Probable porphobilinogen deaminase hemC [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124599916|gb|EAY58926.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C]
gi|148504431|gb|ABQ72240.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|148720239|gb|ABR04864.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis F11]
gi|224772013|dbj|BAH24819.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172]
gi|289414815|gb|EFD12055.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|289419014|gb|EFD16215.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A]
gi|289437396|gb|EFD19889.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605]
gi|289537531|gb|EFD42109.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85]
gi|289542188|gb|EFD45836.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17]
gi|289684748|gb|EFD52236.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|289689592|gb|EFD57021.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92]
gi|289693132|gb|EFD60561.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|289708138|gb|EFD72154.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503]
gi|289712151|gb|EFD76163.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|298493785|gb|EFI29079.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|326902339|gb|EGE49272.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis W-148]
gi|328457228|gb|AEB02651.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
4207]
Length = 309
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 150/308 (48%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAATVRDALIA----GGHSAELVTISTEGDR-SMAPIASLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + S
Sbjct: 56 TALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G+ A +G A +
Sbjct: 236 APVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|225010397|ref|ZP_03700869.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C]
gi|225005876|gb|EEG43826.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C]
Length = 303
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 146/301 (48%), Gaps = 9/301 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LA+ A +S L ++P+ + GD ++ L E+G G+
Sbjct: 3 KTLRIGTRDSALAMWQAKTVQSQLAAH----GIASELVPVKSLGDLKLDQPLYELGVTGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L++GEID AVHS KD+PT L KGL +A L R DV + +S
Sbjct: 59 FTKTLDLALLAGEIDLAVHSYKDVPTVLAKGLSTAAVLKRASTADVLV---HKSPDFTTS 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I TSSLRRKA L + ++D RG ++TRL KL NN + A AG+ RL
Sbjct: 116 GLQIATSSLRRKAQWLAKYPEHQLVDIRGNVQTRLEKLANNSWGGAIFAAAGLARLDL-- 173
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + + ++ P+P QGA+ + + E + V+N T ER FL EL+G
Sbjct: 174 LPENAMRLDWMVPAPAQGAMVVVAQSAHTVLLEELSVLNDSQTALCTQIEREFLNELEGG 233
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + I L+F G++ + DGK E + A GR AQ I K
Sbjct: 234 CTAPIGALCTTTQDQLHFIGVLHSLDGKQHIETNTFVPLDQAPGYGRKMAQKILSQGGKA 293
Query: 304 V 304
+
Sbjct: 294 L 294
>gi|189200240|ref|XP_001936457.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983556|gb|EDU49044.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 399
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 106/347 (30%), Positives = 149/347 (42%), Gaps = 47/347 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60
P IGTR S LA A SL D + P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVIVQGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116
K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYA 174
+L L + IGTSS+RR A L + + D RG + TRL KL+ AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDEAMKELMSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262
ERA L L+G C I KG L
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLSVGPQPAKDYDKHGNAVEEDEPDVDDQELVMR 327
Query: 263 GIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306
+V++ DGK E N +A +GR+ A+ + +
Sbjct: 328 AMVVSVDGKESVEYEATRKVRNAEEAEEMGREVAKILIEKGADKILE 374
>gi|257054363|ref|YP_003132195.1| porphobilinogen deaminase [Saccharomonospora viridis DSM 43017]
gi|256584235|gb|ACU95368.1| hydroxymethylbilane synthase [Saccharomonospora viridis DSM 43017]
Length = 316
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 19/313 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIGTR S LA++ L + + + ++P+ST GDR ++ + EIG
Sbjct: 5 SSRTLRIGTRASNLAMSQTRTIAKMLEEAGQ----KVELVPVSTPGDR-SSAPIAEIG-V 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT + + L++ E+D AVHS KD+PT G+ ++A RED RDV IS +L +L
Sbjct: 59 GVFTSALREALLANEVDVAVHSYKDLPTAPQPGIVLAAVSKREDPRDVLISRDGLTLGEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT S RR L + ++ RG I+TR+ K+ + + AI+LA AG+ R+ K
Sbjct: 119 PPGAKVGTGSPRRMTQLRALGLGLEIVPIRGNIDTRIAKVTSGELDAIVLAKAGLTRVGK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-NHEDTWDSVNCERAFLAEL 240
+I E+++ P+P QGA+ +ET V++ + L++ I +HE T +V ERA LA L
Sbjct: 179 LDLITEVIDPMQILPAPAQGALAVETRVDDVDTEHLLRSIVDHEATRVAVAAERAVLATL 238
Query: 241 DGSCKSAIAGFAYCKGS---------TLYFYGIVLAS---DGKIFHEVSRNGNRCDAINI 288
C + + A L G+ + D S ++ +A +
Sbjct: 239 QAGCSAPVGALAEVVEDLDSEGAVVERLSLRGVAATATEGDSVQILRASGVADKHEADRL 298
Query: 289 GRDAAQYIRFISN 301
GR A + +
Sbjct: 299 GRTVASELLDLGA 311
>gi|307266129|ref|ZP_07547673.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918819|gb|EFN49049.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 299
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 92/304 (30%), Positives = 142/304 (46%), Gaps = 12/304 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK ++G+R S LAL + + + I+ ++T+GD + ++ ++EIGGKG
Sbjct: 2 KKVIKVGSRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPISEIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+ GEID AVHS KDMP ++ + L++ A L RED +DVF+S DL
Sbjct: 60 VFVKEIESALLKGEIDMAVHSMKDMPYEIPEKLKLMAVLKREDPKDVFVSRNGTKFIDLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR+ L R DI ++ RG + TRL K+ I+L+ AG+ RL E
Sbjct: 120 KGAKIGTSSLRRQVQLKALRPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241
+I E + P+P QG + +E + QE I T+ + ER L
Sbjct: 180 SIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFG 239
Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+C+ +A G + D + G + + I+
Sbjct: 240 VNCRQPFGAYAQYGRENDGEKIDIKVAYQKED--KLLKSEMTGLIVETDKMIEKL---IK 294
Query: 298 FISN 301
Sbjct: 295 EFGG 298
>gi|290958356|ref|YP_003489538.1| hydroxymethylbilane synthase [Streptomyces scabiei 87.22]
gi|260647882|emb|CBG70987.1| putative hydroxymethylbilane synthase [Streptomyces scabiei 87.22]
Length = 322
Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 17/315 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA++ + + ++ + P + ++ ++T GD ++ L +IGG G
Sbjct: 6 NRALRLGTRRSTLAMSQSRQVADAVRRLTGRP---VELVEITTYGD-VSREQLAQIGGTG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + L+ GE+D AVHS KD+PT L ++A R D RDV ++ + + L
Sbjct: 62 VFVAALREALLRGEVDFAVHSLKDLPTTYPDELTLAAVPVRADARDVLVARDGLTFEQLP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ +GT S RR A L + + RG ++TR+ + + A++LA AG+ R
Sbjct: 122 AGARVGTGSSRRMAQLNAYARGHGLTIETVPIRGNVDTRIGYVRKGELDAVVLAAAGLSR 181
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + + L+++ P+PGQGA+ IE + + + ++ DT +V ER+ LA
Sbjct: 182 IGRIDEVTDFLSVDTVLPAPGQGALAIECAAADAELIAALAGLDDPDTRAAVTAERSLLA 241
Query: 239 ELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIG 289
L+ C + + FA + G+V +DG ++S G A+ +G
Sbjct: 242 ALEAGCSAPVGAFADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETYDQAMALG 301
Query: 290 RDAAQYIRFISNKNV 304
R+ A + +
Sbjct: 302 RELAAEMLAKGAAGL 316
>gi|254821058|ref|ZP_05226059.1| porphobilinogen deaminase [Mycobacterium intracellulare ATCC 13950]
Length = 315
Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ + H ++ ++T GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGVVRDALIAL----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAMEEGRVDAAVHSHKDLPTADDPRFAVAAIPVRNDPRDAVVARDGLVLGELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ER LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDTRLAAVLAELDDADTRASVTAERTLLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEEGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|269796870|ref|YP_003316325.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542]
gi|269099055|gb|ACZ23491.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542]
Length = 312
Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 17/317 (5%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P RIGTR S LAL L + P + I+P++T GD + +L+++G
Sbjct: 1 MTGHPALRIGTRSSLLALTQTGTVADDLRRLTGRP---VEIVPVTTDGD-VLTGSLSQMG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + L+ D AVHS KD+PT + GLQ R+D RD S L
Sbjct: 57 GTGVFVTALRAALLDDRCDVAVHSLKDLPTAGVLGLQH-VTPVRQDPRDALCSRAGHRLA 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
DL + +GT S RR A L R D+ V+D RG I+TRL +++ A++LA AG+
Sbjct: 116 DLPHGARVGTGSPRRAAQLRLVRPDLDVVDIRGNIDTRLGRVHPETGDLDAVVLAAAGLN 175
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCE 233
R+ +E I E++++ D P+PGQGA+ +ET +P ++ T SV E
Sbjct: 176 RIGREHAITELISVTDMAPAPGQGALAVETRSSLLEEDPVVARAFDQLDDPATSLSVLAE 235
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AINI 288
RA LA L+ C + + A L + +V DG +++ D A+ +
Sbjct: 236 RALLARLEAGCAAPVGTHATVSDGLLTLHAVVARPDGSEQLRHNQSTEVADTSTAEAVAL 295
Query: 289 GRDAAQYIRFISNKNVF 305
G A + + +
Sbjct: 296 GEAVADHFLALGAASFI 312
>gi|289811310|ref|ZP_06541939.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 235
Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 116/225 (51%)
Query: 81 VHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLR 140
+HS KD+P GL + RED RD F+S+ SL DL S++GTSSLRR+ L
Sbjct: 1 MHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAE 60
Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ 200
R D+ + RG + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQ
Sbjct: 61 RRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQ 120
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
GA+ IE +++ + Q L+ +NH T V ERA L+G C+ I +A ++
Sbjct: 121 GAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIW 180
Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+V A DG + R G+ A +G A+ + + +
Sbjct: 181 LRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAIL 225
>gi|145476419|ref|XP_001424232.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391295|emb|CAK56834.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats.
Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 15/309 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGK 61
+K RI TR S LA+A L II +S + GD L ++
Sbjct: 2 QKQIRIATRSSALAMAQTNYVIGELKQ-------EFEIIKVSNEVGDVNLQDPLYQMPTV 54
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +SL
Sbjct: 55 GVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLYLAAYTKFEQRGDVVLLNNKYNYKSL 114
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L IGTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI R
Sbjct: 115 SELPEGFKIGTSSLRRIATIKNRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGILR 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I L ++F +P Q A+ I+ ++ + ++++N D+ ER FL
Sbjct: 175 LGLSERISFDLEEKEFLYAPAQAALGIQCRKDDLQTIARLQILNDIDSQKRCVAERMFLN 234
Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ IA ++ C + +Y G V+A DG E +G+ + I+
Sbjct: 235 LLEGGCRLPIAVYSECREDGQVYIKGRVMAVDGSKVIEDEA---LDHFEKVGQILCEKIK 291
Query: 298 FISNKNVFN 306
+ +
Sbjct: 292 VLGGVELIE 300
>gi|295839212|ref|ZP_06826145.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197695664|gb|EDY42597.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 314
Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 161/313 (51%), Gaps = 15/313 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA + L P +I ++P++TK D+ L ++GGKGLF
Sbjct: 1 MRIGTRSSPLALAQVEQVSGLLRKFE--PDLDIEVVPVTTKADKWQGD-LAQLGGKGLFV 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
EI++ L G++D AVH KD+P + +GL +AYLPR+D+RDV + QSL
Sbjct: 58 REIDQMLQRGQVDMAVHCMKDVPGDVPMPRGLIFAAYLPRDDVRDVLLVPEGSDVQSLAG 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-----AHAILLAYAG 175
L + + TS++RRKA + R R D++V+ RG + +R++KL+ K A++LA AG
Sbjct: 118 LPPGASVATSAVRRKAQINRVRPDLNVVRVRGLVGSRIDKLDGRKPMDHMLDAMVLARAG 177
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
++RL +++ + + P+ G GA+ +E ++ L++ +N E T + ER
Sbjct: 178 LERLDLMHRARQVFEVAEMLPAVGAGALGLECREDDDAVAYLLQQLNDEPTMTEITAERV 237
Query: 236 FLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDAA 293
L L G C S IAG L G+V + DG F G + D +G
Sbjct: 238 MLHGLRGHCNSPIAGHCVTDPDGQLSLRGMVFSRDGSKFVHAHFWGESMNDPAVLGSRVC 297
Query: 294 QYIRFISNKNVFN 306
+ +++
Sbjct: 298 AELLRQGARDIIE 310
>gi|298252253|ref|ZP_06976056.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963]
gi|297546845|gb|EFH80713.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963]
Length = 334
Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 147/319 (46%), Gaps = 20/319 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IGTR S LA+ + + P I I + T GDR+T+ L+ IGG G+
Sbjct: 5 KRITIGTRASKLAMIQTQWIIERI--HQQWPGLEIAIEQIRTTGDRVTSVPLSRIGGDGV 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ------S 117
F EIE L ID AVHS KD+PT +GL + PRED+RDV +S +
Sbjct: 63 FVTEIESALQERRIDIAVHSLKDLPTAQPEGLCVLTPGPREDVRDVLVSKGDLHISARGT 122
Query: 118 LKDLALH--SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L+ + IGT SLRR A + D ++ RG ++TRL KL + AI+LA AG
Sbjct: 123 LEGITPGRAPRIGTCSLRRTAQIRHLCPDAEILSLRGNVDTRLRKLEAGEYDAIILAAAG 182
Query: 176 IKRLKKE---KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
+ RL + + + P+PGQGA+ +E + P +EL+ + + + +
Sbjct: 183 LHRLDLQGTLEGKLSYFPVAQMLPAPGQGALGLEIR-DEPAFRELLAPLQDRNVQAATSA 241
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN------GNRCDAI 286
ER F+ L C +A A+ L G+V + DG+ V + +A
Sbjct: 242 ERMFMRRLGAGCYLPVAAHAHIIDERLVLRGLVTSLDGQRRILVQQETGWNAYAFLENAE 301
Query: 287 NIGRDAAQYIRFISNKNVF 305
+G + A+ ++
Sbjct: 302 RLGIELAEIALAQGAHDII 320
>gi|159041687|ref|YP_001540939.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167]
gi|189042877|sp|A8MDU3|HEM3_CALMQ RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|157920522|gb|ABW01949.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167]
Length = 305
Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats.
Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 3/296 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S L+L +++ +K +I + T GD ++ L EIG KG+F
Sbjct: 2 IIRIATRGSALSLKQTKIVMDRILEFNK--DVEFKLIIVKTTGDVDLSKPLYEIGVKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E+ + ++ GE D AVHS KDMP ++ L + PR++ RD +S ++ L L+
Sbjct: 60 EREVNQAVLRGEADVAVHSLKDMPAQISNDLTLVMTPPRDNPRDALVSLRQYTVDTLPLN 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR+ LL R D++V RG ++TR+ KLNN + A+++A AG++RL
Sbjct: 120 SIVGTSSLRRRGFLLSLRRDVTVKPIRGNVDTRIRKLNNGEYDALIMAAAGLERLSINAN 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E ++ E PP+PGQG I + + ++++ + E+T+ ERAFL+ + C
Sbjct: 180 VSE-ISPELMPPAPGQGIIGVVARRDRDDLIKVLRRSSDEETFKEAAAERAFLSRIGAGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ G A F V+ DG S + + GR AA+ + +
Sbjct: 239 HVPLGGLALLDDGYFDFTYGVVDPDGVEKFINSTRIDARNPEEAGRVAAEDLLRNA 294
>gi|329936060|ref|ZP_08285860.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045]
gi|329304538|gb|EGG48416.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045]
Length = 323
Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 21/321 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + ++ +V P + ++ ++T GD + L +IGG
Sbjct: 1 MTEQALRLGTRRSKLAMAQSGQVADAVGEVTGRP---VELVEITTYGDT-SREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT + L ++A RED RDV I+ + D
Sbjct: 57 TGVFVAALREALLRGEVDLAVHSLKDLPTTQPEELTLAAVPLREDPRDVLIARDGLAFAD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L + D + RG I+TR+ + + A++LA AG+
Sbjct: 117 LPEGARVGTGSPRRMAQLNAYARDHGTRIETVPIRGNIDTRIGYVRKGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN----PKAQELVKVINHEDTWDSVNC 232
R+ + + + L+++ P+PGQGA+ +E + ++ T +V
Sbjct: 177 NRIGRTSEVTDFLSVDTVLPAPGQGALAVECRTAGNPADAALAAALAQLDDPFTRAAVTA 236
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----C 283
ERA LA L+ C + + A + G+V +DG ++S G
Sbjct: 237 ERALLAALEAGCSAPVGALADLLNDGQIDKEMRLRGVVGTTDGSTLVQLSTTGPVPETHD 296
Query: 284 DAINIGRDAAQYIRFISNKNV 304
A+ +GR+ A + +
Sbjct: 297 QAMALGRELAAEMLAKGAAGL 317
>gi|303314269|ref|XP_003067143.1| porphobilinogen deaminase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106811|gb|EER24998.1| porphobilinogen deaminase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037407|gb|EFW19344.1| porphobilinogen deaminase [Coccidioides posadasii str. Silveira]
Length = 331
Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LAL R++L P + GD L K
Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQAA--FPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + +L
Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPTACVLAAVMKRENPRDVLVLKKGLPSMTL 122
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL + ++LA AG+
Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R +E I + L+ + + GQG + IE ++ ++++ I T + ER
Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYACLAER 242
Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
+ L L+G C + + L IV + DGK E+ +G+ A
Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGDVQSDEAAE 302
Query: 287 NIGRDAAQYIRFISNKNVF 305
G++ A + +
Sbjct: 303 TFGKEVALKLVARGAGKIL 321
>gi|124027712|ref|YP_001013032.1| porphobilinogen deaminase [Hyperthermus butylicus DSM 5456]
gi|158513943|sp|A2BL26|HEM3_HYPBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|123978406|gb|ABM80687.1| Porphobilinogen deaminase [Hyperthermus butylicus DSM 5456]
Length = 303
Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats.
Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 5/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L++A ++ V P ++ + T+GD ++ T IGGKGLF
Sbjct: 2 KLRVATRGSKLSIAQTMIALEAIKRVE--PSLEYELVIVKTRGDIHQDKPFTAIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SLKDLA 122
+E+ ++ G D AVHS KD+P+ + GL ++ PR+ DV + + ++ DL
Sbjct: 60 EKEVNLAVLEGRADIAVHSLKDVPSAISPGLVLAMTPPRDPPYDVLVVRGGKEKTIWDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSS RR A+L R D+ RG ++TRL KL + AI+LA AG+KRL
Sbjct: 120 SGAIVGTSSARRVAMLKHVRRDLVFKVLRGNVDTRLRKLEQGQYDAIVLAEAGLKRLGV- 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + + PP+PGQG I + T + +++ + + ERAFLA G
Sbjct: 179 DIEYWRIPPDILPPAPGQGIIGVYTLSSRSDILPILEKASDQKAMAEARAERAFLAYAGG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + + +A +G+TLYF+ + + DG EV G+ +G +AA +R ++ +
Sbjct: 239 GCHTPLGAYAELRGNTLYFHAALASPDGSRRVEVRVEGDPDKPTQVGLEAAFELRRLAAR 298
Query: 303 N 303
Sbjct: 299 E 299
>gi|213964875|ref|ZP_03393074.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46]
gi|213952411|gb|EEB63794.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46]
Length = 310
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 90/301 (29%), Positives = 147/301 (48%), Gaps = 7/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R +L+++ + ++ + T GD + + +IG G+F
Sbjct: 6 TIRIGTRGSELATTQAGHVRDALIELGQPA----ELVIVKTAGDHNRHDPVEKIG-IGVF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L G D VHS KD+PT + ++A R D R+ IS A L DL
Sbjct: 61 TQALRHALREGVCDIIVHSFKDLPTVPEDDMMVAAVPERVDPREALISRDATPLMDLPEG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L RSD+ ++ RG IETR+ ++ + A++LA AG++R +
Sbjct: 121 ARVGTSAPRRVSQLRALRSDLELVPLRGNIETRMGRV-SEDLDAVILARAGLERTGRLGE 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+++ P+P QGA+ +E + + ++++ I+H + ERA L +L+ C
Sbjct: 180 IAESLDVDVLMPAPAQGALALECRTADREIVDILRKIDHPVSHARAVAERAVLNKLEAGC 239
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ +A +A L V A DG + N A +GR A +
Sbjct: 240 TAPVAAYATVSDSGELTLQAGVFALDGSRQLLETATANVDKADELGRKVAAALLERGAHE 299
Query: 304 V 304
V
Sbjct: 300 V 300
>gi|228472965|ref|ZP_04057722.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624]
gi|228275547|gb|EEK14324.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624]
Length = 315
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 7/302 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RIGTR S LAL A + ++ L + + ++P+ ++GD + L E+G G
Sbjct: 9 KKTLRIGTRDSELALWQAKKVQTLLENF----GYTTSLVPVKSQGDLSLDIPLYEMGITG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV +
Sbjct: 65 VFTKVLDVAMLQGSIDIAVHSMKDVPTSLPKGIVKGAVLTRANVQDVLVYKDGLDFLSQE 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ I T SLRRKA LR V + RG I TRL+KL+ + H + A A ++RL ++
Sbjct: 125 Q-ATIATGSLRRKAQWLRRYPTHQVENLRGNIATRLHKLHEHSWHGAIFAAAALERLAQD 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + L++E P+P QGAI ++P E + +IN ER FL L+G
Sbjct: 184 HLQR--LSLEWMTPAPAQGAILAVAMDSDPYTLEALSLINDPKADTETQIERRFLKRLEG 241
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + I A +G TL F G + + DGK EV ++ + D AQ + +
Sbjct: 242 GCTAPIGAKATLEGDTLSFVGNLFSLDGKQAVEVRKSIPTHSIGSFPEDCAQELLHSGGE 301
Query: 303 NV 304
+
Sbjct: 302 GI 303
>gi|91782420|ref|YP_557626.1| porphobilinogen deaminase [Burkholderia xenovorans LB400]
gi|91686374|gb|ABE29574.1| Porphobilinogen deaminase [Burkholderia xenovorans LB400]
Length = 285
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 98/266 (36%), Positives = 147/266 (55%), Gaps = 3/266 (1%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L +G +S +
Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVPMALPEGFALSTIME 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD +S+T SL L +V+GTSSLRR+A+L + V RG ++TRL KL+
Sbjct: 61 REDPRDALVSNTYDSLAALPEGAVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+KRL + I+ +L+ ED P+ GQGA+ IE + + + ++
Sbjct: 121 RGDYAAIILAAAGLKRLGLGERIRALLDPEDSLPAAGQGALGIEIRADRAELAAWLAPLH 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
HE T +V ER L GSC+ +A +A L+ GIV DG+ +
Sbjct: 181 HEHTAAAVEAERMVSRALGGSCEVPLAAYATWHDGALHLRGIVATPDGQRVLSAQASAPA 240
Query: 283 ---CDAINIGRDAAQYIRFISNKNVF 305
AI +G++ A + +
Sbjct: 241 TSVEQAIALGQEVAGALEQQGAMEIV 266
>gi|108797657|ref|YP_637854.1| porphobilinogen deaminase [Mycobacterium sp. MCS]
gi|119866744|ref|YP_936696.1| porphobilinogen deaminase [Mycobacterium sp. KMS]
gi|108768076|gb|ABG06798.1| hydroxymethylbilane synthase [Mycobacterium sp. MCS]
gi|119692833|gb|ABL89906.1| hydroxymethylbilane synthase [Mycobacterium sp. KMS]
Length = 314
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 15/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ +ST+GDR + +IG G+F
Sbjct: 7 PIRIGTRASLLATTQAGTIRDALIAR----GHAAELVLISTEGDRNQG-PIADIG-VGVF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + + + G +D AVHS KD+PT + I A RED RD ++ L +L
Sbjct: 61 TAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVLGELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R+ +
Sbjct: 121 STVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLARIGRLGD 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L P+P QGA+ +E + L+ ++ DT +V ER LAEL+ C
Sbjct: 181 VTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLAELEAGC 240
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A + G V A DG S G A ++G A
Sbjct: 241 SAPVGAIAEVVESIDEDGRVFEEVSLRGCVAALDGSDVIRASGIGTPGRAADLGVSVAAE 300
Query: 296 IRFISNKNVF 305
+ + + +
Sbjct: 301 LFELGARELI 310
>gi|261749160|ref|YP_003256845.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497252|gb|ACX83702.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 310
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 146/307 (47%), Gaps = 9/307 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR SPLA++ A E + L + + ++GD I N L + G
Sbjct: 2 NKIIRIGTRNSPLAISQAIEVQKVLHRLGYCSHLFF----IKSEGDLIQNIPLYKFKKVG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121
+FT + L+SG+ID AVHS KD+PT L + + +SAYL R D+ I + + L +
Sbjct: 58 IFTRNLTDVLLSGKIDMAVHSLKDVPTSLPEKIVLSAYLKRGSFSDLLIYQGSSNFLLNS 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +VI T SLRR+A +++D RG I TRL KL NN + A G++RL
Sbjct: 118 KIEAVIATGSLRRRAFWKNRYPHHTIVDLRGNINTRLKKLYNNSWKGAIFAKVGLERLGL 177
Query: 182 EK--VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ PSPGQG I + T +N L K ++ +T S N ER FL
Sbjct: 178 LNDLEGFNFKVLDWMIPSPGQGIIVVSTRKDNEWIHYLTKELDDRNTRLSANIERQFLKT 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C + I A K +YF GI+ + DG + G + IG A+ I
Sbjct: 238 LGGGCVTPIGAHAIIKNKIIYFTGILFSLDGMQKIRKKKIGTNYNV--IGYQCAKEILEE 295
Query: 300 SNKNVFN 306
K +
Sbjct: 296 GGKKILE 302
>gi|289577611|ref|YP_003476238.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9]
gi|289527324|gb|ADD01676.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9]
Length = 299
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 93/298 (31%), Positives = 141/298 (47%), Gaps = 9/298 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK ++G+R S LAL + + + I+ ++T+GD + ++ ++EIGGKG
Sbjct: 2 KKVIKVGSRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPISEIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+ GEID AVHS KDMP + +GL++ L RED RDVFIS +L
Sbjct: 60 VFVKEIESALLKGEIDMAVHSLKDMPYETPEGLKLIPVLKREDPRDVFISKDGTQFMNLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR+ L RSD+ I RG I+TRL K+ I+L+ AG+ RL E
Sbjct: 120 EGAKIGTSSLRRQVQLKDLRSDMQTIPIRGNIKTRLRKIEELNLDGIVLSAAGLHRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241
+I E + P+P QG + +E + QE I T+ + ER L
Sbjct: 180 SIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASIERELLKVFG 239
Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+C+ +A + + D + G + + +
Sbjct: 240 VNCRQPFGAYAQYRKERDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEE 295
>gi|257069787|ref|YP_003156042.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810]
gi|256560605|gb|ACU86452.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810]
Length = 337
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 33/335 (9%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL + ++L+D H + ++ +ST+GDR L +IGG
Sbjct: 1 MTGASLRIGTRASDLALTQSGHVGAALVD---GTGHEVELVHVSTRGDRDRTSPLAQIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ G +D VHS KD+PT L+ + ++ Y PRED RD + +L
Sbjct: 58 TGVFVTAVRQALLDGTVDVVVHSCKDLPTAPLEEITLACYPPREDPRDALCARDGLTLAQ 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178
L S +GT S RR A LLR R D+ V RG +ETRL + +A A++LA +G++R
Sbjct: 118 LPAGSRVGTGSPRRAAQLLRARPDLEVTGIRGNVETRLKRALGPEADLDAVVLAASGLRR 177
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIE----THVNNPKAQELVKVINHEDTWDSVNCER 234
+ +E VI E+L +E P+P QGA+ +E P E + ++ T +V ER
Sbjct: 178 VGREAVISELLPVEVMLPAPAQGALAVEATTAALAQEPWFAERLTAVDDPATRAAVTAER 237
Query: 235 AFLAELDGSCKSAIAGFAYCK-------------GSTLYFYGIVLASDGKIFHEVSR--- 278
L L+ C + +A +A + G L + + +DG E
Sbjct: 238 MLLRTLEAGCSAPVAAYAEIEAPGAATAEGEPAGGGVLRLRALAIRTDGSHVVEGEARMA 297
Query: 279 --------NGNRCDAINIGRDAAQYIRFISNKNVF 305
+G +G + A + ++
Sbjct: 298 LDLAADALSGPESVPAALGAELAADLLSRGAGDIL 332
>gi|41410101|ref|NP_962937.1| porphobilinogen deaminase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254777076|ref|ZP_05218592.1| porphobilinogen deaminase [Mycobacterium avium subsp. avium ATCC
25291]
gi|55976459|sp|Q73SS0|HEM3_MYCPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|41398934|gb|AAS06553.1| HemC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 315
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGVRDALIAR----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLAELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEDGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|118467030|ref|YP_883768.1| porphobilinogen deaminase [Mycobacterium avium 104]
gi|158512461|sp|A0QLI0|HEM3_MYCA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118168317|gb|ABK69214.1| porphobilinogen deaminase [Mycobacterium avium 104]
Length = 315
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGVRDALIAR----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLGELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEDGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|260654411|ref|ZP_05859901.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1]
gi|260631044|gb|EEX49238.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1]
Length = 714
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 90/298 (30%), Positives = 149/298 (50%), Gaps = 9/298 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+ +R S LA+A + L H+ ++ IIP T+GD + +R L GGKGL
Sbjct: 424 RPLRLASRESELAMAQSRLVAERL---HEATGFDVEIIPFRTRGDAVADRRLESAGGKGL 480
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++SG+ D AVHS KDMP+ GL +A + R+ D + +
Sbjct: 481 FVKELERAILSGQADLAVHSLKDMPSSCPDGLAFAALMDRQTAFDCLVLRPGLT----GR 536
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IGTSS RR A SD + RG + TRL+KL+ + A++LA AG++RL ++
Sbjct: 537 PVRIGTSSARRIAQGRALFSDAQFVPLRGNLRTRLSKLDGGEFDALILAEAGLRRLGLQE 596
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + + + PS GQG + ++ + P +LV ++ ERAF+ L+G
Sbjct: 597 RVSRVFSADQMIPSAGQGTLAVQCPFDGP-VFDLVSQLDEPAVRTCCLAERAFIDRLNGG 655
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + +A G T+ G+ + DGK +G D ++ + A ++ +
Sbjct: 656 CTAPHGAYARVDGETIEMIGLYVRPDGKTL-SGKISGPAADGPSLAAELADRLKRRGD 712
>gi|126433281|ref|YP_001068972.1| porphobilinogen deaminase [Mycobacterium sp. JLS]
gi|126233081|gb|ABN96481.1| hydroxymethylbilane synthase [Mycobacterium sp. JLS]
Length = 314
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 15/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ +ST+GDR + +IG G+F
Sbjct: 7 PIRIGTRASLLATTQAGTIRDALIGR----GHAAELVLISTEGDRNQG-PIADIG-VGVF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + + + G +D AVHS KD+PT + I A RED RD ++ L +L
Sbjct: 61 TAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVLGELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R+ +
Sbjct: 121 STVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLARIGRLGD 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L P+P QGA+ +E + L+ ++ DT +V ER LAEL+ C
Sbjct: 181 VTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLAELEAGC 240
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A + G V A DG S G A ++G A
Sbjct: 241 SAPVGAIAEVVESIDEDGRVFEEVSLRGCVAALDGSDVIRASGIGTPGRAADLGVSVAAE 300
Query: 296 IRFISNKNVF 305
+ + + +
Sbjct: 301 LFELGARELI 310
>gi|239607866|gb|EEQ84853.1| porphobilinogen deaminase [Ajellomyces dermatitidis ER-3]
Length = 347
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 147/319 (46%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + +L
Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+
Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 195 LRTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + L IV + DGK E+ ++ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKQVADELVTLGAGRIL 333
>gi|326391319|ref|ZP_08212859.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200]
gi|325992648|gb|EGD51100.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200]
Length = 299
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 9/298 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGKG
Sbjct: 2 KKVIKVGTRSSELALKQTAMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 60 VFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL E
Sbjct: 120 EGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241
+I E + P+P QG + +E + QE I T+ + ER L
Sbjct: 180 NIITEYFPPDVVVPAPCQGILSVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAFG 239
Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+C+ +A + + + G + + +
Sbjct: 240 VNCRQPFGAYAQYRKEEDEEKINIKVAYQKEN--KLLKSEATGLIEETDKMIEKLIEE 295
>gi|305679995|ref|ZP_07402805.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC
14266]
gi|305660615|gb|EFM50112.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC
14266]
Length = 298
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 8/299 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LA A R +L H P + ++T GD E G G+FT+
Sbjct: 4 IGTRGSLLATTQAGHVRDALTS-HGYPS---ELRIVTTTGDVNL--APVERIGVGVFTQA 57
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+ L++GE D AVHS KD+PT + + RE+ RD I+ +L +L +V+
Sbjct: 58 LRDSLLAGECDIAVHSFKDLPTAVDE-RFHLVVPHRENARDCLIARNNLTLAELPTGAVV 116
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT + RR A L R DI + RG I+TR+ K+++ + A++LAYAG+ R+ + E
Sbjct: 117 GTGAPRRIAQLKALRPDIHTVPLRGNIDTRMAKVHDGELDAVVLAYAGLSRVHRADEATE 176
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ + +F P+P QGA+ +E ++ + I + + ER LA L+ C +
Sbjct: 177 VFDPLEFLPAPAQGALAVECRADDADTIAAITTIADPKAYACAHTERVVLARLEAGCTAP 236
Query: 248 IAGFAYCKGSTL-YFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A + + V+A DG + G A N+G A+ + ++
Sbjct: 237 VAAYATVAADNIMTLHAAVIAVDGSATLRATAAGPIDTAENLGMTVARALLDDGASSLL 295
>gi|58699644|ref|ZP_00374329.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58533839|gb|EAL58153.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 267
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 104/263 (39%), Positives = 148/263 (56%), Gaps = 6/263 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 3 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L +
Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 121 TIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLA 267
+ +A A + LY V
Sbjct: 238 TPLAALAEYVSENMLYLSLYVGR 260
>gi|327355808|gb|EGE84665.1| porphobilinogen deaminase [Ajellomyces dermatitidis ATCC 18188]
Length = 347
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 146/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + +L
Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+
Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 195 LRTGQGDRITYYLGSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + L IV + DGK E+ ++ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKQVADELVTLGAGRIL 333
>gi|261198286|ref|XP_002625545.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081]
gi|239595508|gb|EEQ78089.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081]
Length = 347
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 146/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---L 118
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + L
Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMAL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+
Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 195 LRTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + L IV + DGK E+ ++ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKQVADELVTLGAGRIL 333
>gi|325846167|ref|ZP_08169236.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481646|gb|EGC84682.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 779
Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 95/301 (31%), Positives = 147/301 (48%), Gaps = 6/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG+R S LAL A + L I+ +STKGDRI +R + ++ KG+F
Sbjct: 2 IKIGSRASKLALIQANMVKDILEK----EGLEAQIVEISTKGDRIRDRKIDQLNSKGVFV 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D ++
Sbjct: 58 REIEEKLLDKTIDLAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDIFKKMDDLNNA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR + ++I RG +ETR+ K+ + ++LA +G+ R + I
Sbjct: 118 LVGTGSNRRVCQGKNYFTNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ F PSP QG + IE + K E+ K + E T + ERAF EL C
Sbjct: 178 NFDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCS 237
Query: 246 SAIAGFAYCKGSTLYFYG-IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + F + G + D +I +E +GN D IN+ + A+ ++ S K +
Sbjct: 238 TPMGIFTEIDHDKITLTGSMAFDKDDRINYE-KVSGNISDRINLAQKLARTLKKKSYKKI 296
Query: 305 F 305
Sbjct: 297 I 297
>gi|167038985|ref|YP_001661970.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514]
gi|300913424|ref|ZP_07130741.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561]
gi|307723560|ref|YP_003903311.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513]
gi|166853225|gb|ABY91634.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514]
gi|300890109|gb|EFK85254.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561]
gi|307580621|gb|ADN54020.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513]
Length = 299
Score = 288 bits (739), Expect = 6e-76, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 9/298 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGKG
Sbjct: 2 KKVIKVGTRSSELALKQTAMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 60 VFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSGDGTQFMDLK 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL E
Sbjct: 120 EGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241
+I E + P+P QG + +E + QE I T+ + ER L
Sbjct: 180 NIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAFG 239
Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+C+ +A + + + G + + +
Sbjct: 240 VNCRQPFGAYAQYRKEEDEEKINIKVAYQKEN--KLLKSEVTGLIEETDKMIEKLIEE 295
>gi|309389759|gb|ADO77639.1| porphobilinogen deaminase [Halanaerobium praevalens DSM 2228]
Length = 310
Score = 288 bits (739), Expect = 6e-76, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 159/306 (51%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK + IGTR S LAL ++ L K P I +ST GDR ++ +EI +G
Sbjct: 2 KKEYIIGTRNSSLALKQCEILKAKLSS--KFPELEFKIKEISTTGDRERDKKFSEINVEG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F EIE L++ EID AVHS KD+PTKL L+++A + R + DV + L +LA
Sbjct: 60 IFIREIEYALLAEEIDLAVHSFKDLPTKLPAELEVAAVVDRANRYDVLAGAENK-LAELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT SLRRK+ LL +R D+ ++ RG IETRL K+ + ++LA AG++RL +
Sbjct: 119 KGARLGTGSLRRKSQLLAYRPDLEIVPIRGNIETRLKKIKTHNLDGVILAAAGLERLGYK 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E L E P+ QGA+ +E + K +E++K I E V E +FLAE++
Sbjct: 179 EQITEYLAPEICLPAARQGAVAVEIRKEDSKLKEILKTIETEKNNLEVWTEHSFLAEMEA 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFI 299
C + +A A + TL V DG + ++ + ++ + A ++
Sbjct: 239 GCHAPVAAEAIIENKTLTLTAAVGEIDGSRIIKKVAKTKKLDLDSVRSLAQKLAVKVKQA 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAAEII 304
>gi|319949783|ref|ZP_08023807.1| porphobilinogen deaminase [Dietzia cinnamea P4]
gi|319436542|gb|EFV91638.1| porphobilinogen deaminase [Dietzia cinnamea P4]
Length = 354
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 85/333 (25%), Positives = 143/333 (42%), Gaps = 35/333 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + ++GTR S LA A R +L+ + ++ + T+GD + E G
Sbjct: 1 MSSRTLKVGTRGSTLATTQAGHVRDALIAA----GYPAELVIVRTRGDVVM--APVERIG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT E+ L G+ D AVHS KD+PT A PR D DV I+ +++
Sbjct: 55 VGVFTLELRAALERGDCDIAVHSYKDLPTARDDRFAPIAVPPRVDPSDVLIARDGLTMET 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+ RR++ L R D+ + RG I+TR+ + + A++LA AG+ R
Sbjct: 115 LPQGARVGTSAPRRRSQLAALRPDLDLHPLRGNIDTRMGYVTSGDLDAVVLAAAGLDRTG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++ P+P QGA+ +E ++ +A + V++H + + ER L +L
Sbjct: 175 AGERATHRFGIDEMLPAPAQGALAVEARADDTEAIAALAVVDHLPSRVRIAAERTLLRDL 234
Query: 241 DGSCKSAIAGFAYCKGST---------------------LYFYGIVLASDGKIFHEVSRN 279
+ C + + A G+ L + +V A DG S
Sbjct: 235 EAGCTAPVGARAELSGTDSARSDFAGTDPGADAPAADAVLTLHAVVAAHDGTTVLRTSGT 294
Query: 280 --------GNRCDAINIGRDAAQYIRFISNKNV 304
G A +GR A + ++
Sbjct: 295 TVPAEHPDGPVAAAEELGRRLAAELLDRGASDL 327
>gi|260061130|ref|YP_003194210.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501]
gi|88785262|gb|EAR16431.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501]
Length = 315
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 141/310 (45%), Gaps = 20/310 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LAL A R L H ++P+ + GD + ++ L E+G G
Sbjct: 2 SRALRIGTRDSELALWQAQTVRDRLEAA----GHRAELVPVKSTGDLVLDKPLYELGITG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L+ +ID AVHS KD+PT L +G+ +A L R RDV H D
Sbjct: 58 IFTKTLDVALLREDIDLAVHSMKDVPTALPEGICQAAVLERASARDVL-VHKGLGFLDGP 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
I T SLRRKA L V RG + TRL L N + A AG++R+
Sbjct: 117 --GTIATGSLRRKAQWLNRYPAHQVTGLRGNVNTRLKLLRENSWDGAIFAQAGLERIGL- 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+P QGA+ + ++ A+E + ++HE + V ER FL L+G
Sbjct: 174 -LPDNAEPLDWMLPAPAQGAMLVVARTSDTAAREAARPLHHEQSALEVAVEREFLRTLEG 232
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---------NGNR--CDAINIGRD 291
C + I + L+ G + + DGK V+R G+ DA G
Sbjct: 233 GCSAPIGARVHAADGQLHLEGGLFSLDGKKAFRVTRHTGSLEAGGTGDARFQDAGEFGAA 292
Query: 292 AAQYIRFISN 301
A+ I
Sbjct: 293 CAREILDSGG 302
>gi|153814114|ref|ZP_01966782.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756]
gi|317499921|ref|ZP_07958157.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087856|ref|ZP_08336781.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848510|gb|EDK25428.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756]
gi|316898638|gb|EFV20673.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330409551|gb|EGG88992.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 307
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 96/307 (31%), Positives = 149/307 (48%), Gaps = 9/307 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LA+ A + + + + II + T GD+I +R+L +GGKG
Sbjct: 2 QSVIRIGSRESRLAVKQAEIIKDQIRRCDQ--TILVEIITMKTTGDKILDRSLESVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L G ID AVHS KDMP + I AY RED RDV I + + +
Sbjct: 60 LFVKELDQALADGRIDLAVHSLKDMPMEESSEFPILAYSRREDPRDVLIYKSEKKEQGTE 119
Query: 123 LH-------SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+VIGTSS RR + + + RG I+TRL+KLN + A +LA AG
Sbjct: 120 EGSILTKTGAVIGTSSKRRMIQIQKLYPNAVFQGIRGNIQTRLSKLNKEEYDAAVLAAAG 179
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KRL E VI ++++ P+ GQG + ++ K + ++ + + ER+
Sbjct: 180 VKRLNMEAVIGRYFSVDEVIPAAGQGILAVQGRKEFLKDTVWRQYVDDKKSRVQALAERS 239
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
F+ LDG C S A +A KG+ L G+ + DA ++G A
Sbjct: 240 FIRVLDGGCTSPSAAYAKVKGNELELTGLYYNEKSGQYFVKKAASYIEDASSLGERLALT 299
Query: 296 IRFISNK 302
++ +
Sbjct: 300 MKKQFGE 306
>gi|296168169|ref|ZP_06850190.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896847|gb|EFG76476.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 317
Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats.
Identities = 95/308 (30%), Positives = 142/308 (46%), Gaps = 16/308 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GDR + E G G FT
Sbjct: 5 IRIGTRGSLLATTQAGVVRDALIAN----GHPAELVIITTAGDR--SSAPIETLGVGAFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR D RDV ++ L +L S
Sbjct: 59 TALREAINDGRVDAAVHSHKDLPTADDPRFTIAAIPPRNDPRDVVVARDGLVLGELPPGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + ++ ++ DT SV ERA LAEL+ C
Sbjct: 179 TETLEPVQMLPAPAQGALAVECRAGDG-LAAVLAELDDADTRASVTAERALLAELEAGCS 237
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 238 APVGAIAEVVESLDEEGRVFEELSLRGCVAALDGSDVIRASGIGTADRARELGVSVAAEL 297
Query: 297 RFISNKNV 304
+ + +
Sbjct: 298 FELGAREL 305
>gi|329903547|ref|ZP_08273542.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480]
gi|327548285|gb|EGF32978.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480]
Length = 280
Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 96/263 (36%), Positives = 145/263 (55%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T+GD+I +RTL+++GGKGLF +E+E + G D AVHS KD+P +L G ++A+L
Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEVAIAEGRADLAVHSLKDVPMELPDGFMLAAFLE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL+ L +V+GTSSLRR+AL+ + + RG ++TRL KL+
Sbjct: 61 REDPRDAFVSNEYASLEALPAGAVVGTSSLRRQALIAARFPHLVIRPLRGNLDTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL + I+ L E P+PGQGA+ IE L+ ++
Sbjct: 121 RGEYAAIILAAAGLKRLGVPERIRMALEPEHSLPAPGQGAMAIEIKAGRTDLAALLAPLD 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H T +V ER GSC+ +A FA G L+ +V DG G
Sbjct: 181 HLATARAVQAERTLSRAFGGSCQIPLAAFAVVDGDQLHLRAMVATPDGVRVASAEARGPA 240
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
+ +G+ A +R + +
Sbjct: 241 DNPEAVGQQVADALRGQDAEIIL 263
>gi|227541639|ref|ZP_03971688.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227182607|gb|EEI63579.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 290
Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 13/301 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R +L+ ++ + ++T GD+ + + +IG G+F
Sbjct: 2 TLRIGTRGSKLATTQAGHVRDALIRA----GYDAELTIITTPGDKNLS-PVQKIG-VGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + + + EID AVHS KD+PT +GL Y RE + I+ +L L
Sbjct: 56 TQALREAMDRDEIDIAVHSCKDLPTGQPEGLATI-YPVRETPCEALIARDGLTLDQLPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 115 AKVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + P+P QG + +E+ + L I+ T S ERA L+ L C
Sbjct: 175 ATQVFDPTYLMPAPAQGILAVESRTHVDAISTL---IDDHAT-LSAQAERAVLSTLQAGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A ++ G + A DG + G D + +G A+ +R + +
Sbjct: 231 TAPLAAYSTVSGDEITLTAGAFALDGSKQIVETATGT--DPVALGTSVAEKLRACGAEEI 288
Query: 305 F 305
Sbjct: 289 I 289
>gi|312216693|emb|CBX96643.1| hypothetical protein [Leptosphaeria maculans]
Length = 398
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 102/346 (29%), Positives = 146/346 (42%), Gaps = 47/346 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60
P IGTR S LA A SL + H P I P+ +GDR L ++
Sbjct: 30 PINIGTRNSVLAQIQARAVERSLKEAH--PERTYNICPVVVQGDRDKTTPLQQLSRGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116
K L+T E+E L SGE+D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGELDLIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYA 174
+L L + IGTSS+RR A L + + D RG + TRL KL+ AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRSATLRKLFPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE + + L+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKGDESTKALLSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262
ERA L L+G C I +G L
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWRGGRGLTTGAQPARDYDKHGNAVEEEEPHVDDQELVLR 327
Query: 263 GIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+V++ DG E + + +A +GR+ A + +
Sbjct: 328 TLVVSVDGTESVEYEVAQKVRSAEEAETMGREVALKLIEKGADKIL 373
>gi|47206204|emb|CAF91821.1| unnamed protein product [Tetraodon nigroviridis]
Length = 385
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 107/378 (28%), Positives = 156/378 (41%), Gaps = 87/378 (23%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT+E+E L
Sbjct: 1 SQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSLFTKELENAL 58
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGT 129
E+D VHS KD+PT L G I A L RE+ D + H ++L L HSVIGT
Sbjct: 59 ERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGT 118
Query: 130 SSLRRKALLLRWRSDISVIDF------------------------RGKIETRLNKLNNNK 165
SSLRR A L + + D RG + TRL KL+ +
Sbjct: 119 SSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKE 178
Query: 166 -AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
AI+LA AG++R+ + I +IL ED + GQGA+ +E + E+V V++
Sbjct: 179 DFAAIILAAAGLRRMGWDNRISQILEPEDCMYAVGQGALAVEVRAKDADILEMVSVLHDP 238
Query: 225 DTWDSVNCERAFLAEL----------------------------DGSCKSAIAGFAYCKG 256
DT ERAFL L +G C +A K
Sbjct: 239 DTVLRCIAERAFLKHLVQHTHTHTHTHTHTRSLAVAHWNLFCLQEGGCSVPVAVHTKVKD 298
Query: 257 STLYFYGIVLASDGKIFHEVS--------RNGNRCD---------------------AIN 287
S LY G V + DG + + +G+ + A
Sbjct: 299 SQLYLTGAVYSLDGSDSLKETMQTSVAAPADGSPDEVDECARVGVTANKIPGEAQDRAER 358
Query: 288 IGRDAAQYIRFISNKNVF 305
+G D A+ + K +
Sbjct: 359 LGVDLAKLLLSKGAKEIL 376
>gi|221633109|ref|YP_002522334.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159]
gi|221155998|gb|ACM05125.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159]
Length = 560
Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 110/293 (37%), Positives = 169/293 (57%), Gaps = 5/293 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIG+R S LALA E L + +P ++ ++P+ T GDR +LT +GG
Sbjct: 1 MAAR-IRIGSRGSTLALAQTEEVVERLRRL--VPECSVTVVPIVTTGDRDRATSLTVLGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F +E+ + L++G ID AVHSAKD+PT+L GL + A L RED RDV ++ + L +
Sbjct: 58 SGVFAKELHEALLAGTIDLAVHSAKDLPTQLPPGLVLVAVLAREDARDVLVTSPPRKLGE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSS RR+ALL R R D+ V+D RG ++TRL KL A++L AG++RL
Sbjct: 118 LPAGARVGTSSRRRQALLQRARPDLIVVDIRGNVDTRLRKLREGIVDALVLGAAGLRRLS 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ E L+ ++F P+PGQGA+ + ++ + EL+ ++ ++V ERAFLA
Sbjct: 178 QADLVAEYLDPDEFVPAPGQGALAVVARESDGRL-ELLSRLDEPLVHEAVAVERAFLAAF 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
C + +A G+ L F VL DG+ F + R +AI R+
Sbjct: 237 GSGCSVPLGAYATIAGNRLRFRIAVLLPDGR-FISQCLDWPREEAIERARELG 288
>gi|160879927|ref|YP_001558895.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
gi|160428593|gb|ABX42156.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
Length = 301
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 8/305 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K+ +G+R S LA+ + P + ++ L T GD I +++L +IGG
Sbjct: 1 MKKQKIVVGSRDSKLAVMQTELIMHEI--NRNNPEIELELVTLKTTGDLILDQSLDKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E++ L+ G ID AVHS KDMP + K L I A R D RDV + +
Sbjct: 59 KGLFVKELDLALLDGRIDIAVHSLKDMPMEENKELPIVALPKRGDARDVLVLPKGCEFIE 118
Query: 121 LALHSV----IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
++ IG+SS RRK + + RG + TRL+KL+ + +++LA AG+
Sbjct: 119 YEDMNLYYQNIGSSSARRKLQIQKLLPSAGTSGVRGNVITRLDKLDRGEYTSLILAAAGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+R+ I ++E+ P+ GQG + I+ + + ++ I +T + ER+F
Sbjct: 179 QRVGLPHRISHYFSVEEMIPAAGQGILSIQARRDLN--VDFLENIKDANTTYASLAERSF 236
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ LDG C S IA +A +G L G+ + ++ A +G A +
Sbjct: 237 VRTLDGGCSSPIAAYAAVEGEELKLVGLYYNEKTTEHRVATVVDHKERAERVGEQLALRL 296
Query: 297 RFISN 301
R
Sbjct: 297 RGEIG 301
>gi|54310580|ref|YP_131600.1| putative porphobilinogen deaminase [Photobacterium profundum SS9]
gi|46915023|emb|CAG21798.1| putative porphobilinogen deaminase [Photobacterium profundum SS9]
Length = 234
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 122/203 (60%), Gaps = 2/203 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PSLVVELVPMVTKGDIILDTPLAKVGG 89
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ +
Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209
Query: 181 KEKVIKEILNIEDFPPSPGQGAI 203
I+ + E+ P+ GQGA
Sbjct: 210 MHDRIRSAIEPEESLPAVGQGAG 232
>gi|149278622|ref|ZP_01884758.1| porphobilinogen deaminase [Pedobacter sp. BAL39]
gi|149230617|gb|EDM36000.1| porphobilinogen deaminase [Pedobacter sp. BAL39]
Length = 526
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 10/260 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IGTR S LAL A + L ++ + + T+GD+I N L ++ GKG
Sbjct: 2 KRLIIGTRGSDLALWQANFIKDRLAEIGA----EAELKIIKTQGDKILNLRLDKLEGKGF 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QSLK 119
FT+E+E++L+ G ID AVHS KD+PT GL I+A RED ++ + +
Sbjct: 58 FTKELEEELLGGTIDIAVHSHKDLPTTHPAGLTIAAVTEREDPSELLLILKDCVDIKQKL 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +++GTSS RRKA LL RSD+++ D RG + TR+ KL + AI+LA AG+ RL
Sbjct: 118 SLKTGAMVGTSSNRRKAQLLALRSDLNIEDLRGNVPTRIQKLRDENYDAIVLAKAGVNRL 177
Query: 180 K--KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ E+++ + P+P QGA+ ++ N+ + L++ +NH+DT D + ER L
Sbjct: 178 NIDLSEFHVEVIDPTEIVPAPAQGALAVQIRENDTELFALLQQLNHQDTIDEIAVERKVL 237
Query: 238 AELDGSCKSAIAGFAYCKGS 257
+G C + + +
Sbjct: 238 NLFEGGCHMPLGCYCKKEEG 257
>gi|313901685|ref|ZP_07835116.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965]
gi|313468036|gb|EFR63519.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965]
Length = 362
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 105/326 (32%), Positives = 161/326 (49%), Gaps = 23/326 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LA A L H P + ++P++T GDR +R L +
Sbjct: 1 MTAAVLRIGTRASALARIQAQWVARQLETHH--PGLRVELVPVTTLGDRNRSRPLYALSS 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117
G F +E+E+ L+ G ID AVHSAKD+PT+L +GL+++A+ RED D + +
Sbjct: 59 PGAFVKELEEALLEGRIDLAVHSAKDVPTRLPEGLELAAFPQREDPADALVIPRPATGRL 118
Query: 118 ------------------LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
L L + +GTSSLRR+A L R D++V RG ++TRL
Sbjct: 119 SVRGPGGEEPPGSEARDLLAALPPGARVGTSSLRRQAWLRARRPDLAVEPARGNLDTRLR 178
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
+L+ A+LLA AG++RL I ++ + P+PGQGA+ +E + + V+
Sbjct: 179 RLDEGHWDALLLAAAGLRRLGFAGRISALVPPLELLPAPGQGALAVEIRAGDEAVRRRVQ 238
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
V++ + +V ERAFLAEL G+C+ + +A +G + G+V G +
Sbjct: 239 VLDRPEVSRAVRAERAFLAELGGTCRVPLGAWARVQGGRIVIDGMVAGPAGSPWLSGRGE 298
Query: 280 GNRCDAINIGRDAAQYIRFISNKNVF 305
G+ D GR A+ + V
Sbjct: 299 GSLSDPEGTGRRLAEQLLAKGAAGVL 324
>gi|242763889|ref|XP_002340664.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC
10500]
gi|218723860|gb|EED23277.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC
10500]
Length = 335
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 146/320 (45%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LALA + +L + P + I T GDR ++ K
Sbjct: 9 ERKTFNIGTRKSKLALAQTYMVVDALKK--EYPQYEFNIKSKDTAGDRDKITAFKDMQTK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+TEE+E+ LI G++D VHS KD+PT L + LPRED RDV I SL
Sbjct: 67 NLWTEELEELLIGGQLDFIVHSLKDVPTLLPPTCALGGVLPREDPRDVLIVKPGLPYTSL 126
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
++ SV+GTSS+RR A L + V RG I+TRL KL+ I+LA AG+
Sbjct: 127 AEIPAGSVVGTSSIRRTAQLAMKFPHLKVQSLRGNIDTRLAKLDGEDSPYTCIILAAAGL 186
Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R I + L+ + GQGAI IE ++ E++ + + T+ V ER
Sbjct: 187 LRTGMGHRITQYLDSRSGSLLYAVGQGAIGIEVRSDDGLVLEMLNKVGDQKTFKEVLAER 246
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
+ L ++G C + + + L+ I+++ DGK + A
Sbjct: 247 SLLRTIEGGCSAPLGVESEWINEVEGTTKLHVRSIIVSVDGKRHSTAELEKVIESAAAAE 306
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G + AQ + +
Sbjct: 307 TFGLELAQELIANGAGPILE 326
>gi|315049563|ref|XP_003174156.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311342123|gb|EFR01326.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 312
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 141/312 (45%), Gaps = 33/312 (10%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A RS L + P H I L T GD+ N L G K L+
Sbjct: 12 PLRIGTRRSNLAVIQAKTIRSQLEKI--APEHTFEIEALHTLGDKDQNSALYNFGAKDLW 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+ L SG++D VH KDMPT+L ++A R+D RD + SL+ L
Sbjct: 70 TTELEELLTSGKLDIVVHCLKDMPTQLPDSCDLAAIPLRDDPRDALVIKAGLPYTSLQTL 129
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179
+++GTSS+RR A L R + ++ RG +ETRL KL++ ++ I+++ G++
Sbjct: 130 PEGAIVGTSSVRRSAQLRRLFPHLRFMNIRGNVETRLAKLDDPKSEYICIVMSACGLE-- 187
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
GQGAI +E + K L + + + ER+ +
Sbjct: 188 ------------------LGQGAIGLEVRKGDAKILRLTDQLLDHKSSLACLAERSLMRT 229
Query: 240 LDGSCKSAIAGFAYCKGS---TLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293
L+G C I TL IV++ DG E + + + +A +G++ A
Sbjct: 230 LEGGCSVPIGVETEWIDKPDATLRIRAIVVSIDGTQSVEDTTDTVVHTKEEATALGQELA 289
Query: 294 QYIRFISNKNVF 305
+ +
Sbjct: 290 ARLLEAGAAAIL 301
>gi|148554852|ref|YP_001262434.1| porphobilinogen deaminase [Sphingomonas wittichii RW1]
gi|148500042|gb|ABQ68296.1| porphobilinogen deaminase [Sphingomonas wittichii RW1]
Length = 308
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 109/291 (37%), Positives = 154/291 (52%), Gaps = 4/291 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P R+GTR SPLAL A ++L H + I+ + T GDRI +R L E+GGK
Sbjct: 6 SRPLRLGTRGSPLALTQARMVIAALRAAHGWDETAVEIVAIKTSGDRIQDRALAEVGGKA 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
L+T+E++ L G ID AVHS KD+ T + I+A LPR D+RD I A SL L
Sbjct: 66 LWTKELDIALADGTIDFAVHSMKDVETIRPAAIVIAAMLPRADVRDRLIG--AASLAALP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSS RR A + R R D+ ++ FRG ++TRL KL +A A LLA AG+ RL ++
Sbjct: 124 QGARVGTSSPRRSAQVRRARPDVGIVLFRGNVDTRLGKLAAGEAEATLLAGAGLIRLGRD 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ + IE+ P+P Q A+ IET + L+ I+ T SV+ ERA LA L
Sbjct: 184 EIG-HPIPIEEMLPAPAQAAVGIETLAERTDVRALLGAIDDAPTNASVSAERALLAALGA 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDA 292
C+S +A A G+ L ++ DG DA +
Sbjct: 243 DCRSPVAALAVRSGAGLLLRAEIMTEDGSEHRSGEAMLFETGDAAALAHRL 293
>gi|189220198|ref|YP_001940838.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4]
gi|189187056|gb|ACD84241.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4]
Length = 298
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 109/299 (36%), Positives = 157/299 (52%), Gaps = 5/299 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP IG+R S LAL A SL + P +I I + T GD + + + +I +G+
Sbjct: 2 KPLIIGSRGSRLALIQAQLIVDSLKK--EYPLLDIQIRVIKTTGDHLEAQPIRDIDQRGI 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EIE KL+ GEID AVHS KD+ +L L I+A PRED RD +IS L
Sbjct: 60 FTKEIENKLLEGEIDLAVHSLKDLQVELHPRLVIAAIPPREDPRDCWISLQHPHPSSLQA 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRLKKE 182
+++ T S RR LLR R D+ ++ RG +E+RL KL N + +LA AGIKRL +
Sbjct: 120 GAIVVTGSPRRANQLLRKRPDLRIVPVRGNVESRLRKLRENRQWQGTVLALAGIKRLGID 179
Query: 183 --KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
L+++ P+PGQGA+ ++ + + Q LVK +N T +V ER FL EL
Sbjct: 180 ISSFFCTPLSMDWMLPAPGQGALALQARIEDKHTQSLVKHLNDFSTACAVTAERVFLHEL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C++A+ A +GS L GI E G A ++G+ A ++ +
Sbjct: 240 GGGCRTAVGARAEVEGSRLVLEGIWWPQQAIEPKEGKVVGEIHRAEDLGKKLADLLKNL 298
>gi|302521073|ref|ZP_07273415.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
gi|318061890|ref|ZP_07980611.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG]
gi|318078097|ref|ZP_07985429.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF]
gi|302429968|gb|EFL01784.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
Length = 323
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 90/297 (30%), Positives = 147/297 (49%), Gaps = 21/297 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP R+GTR S LA+A + ++ + P + ++ ++T GD + L IGG
Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VELVEITTYGDT-SREHLARIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ G++D AVHS KD+PT +GL ++A RED RD I+ +L+
Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLER 116
Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L DI + RG ++TR+N + + + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRMAQLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + + L + P+PGQGA+ +E E + ++ T +V ERA
Sbjct: 177 NRLGRGGEVTAYLASDTVLPAPGQGALAVECPPG--PLAEALARLDDPRTRAAVTAERAL 234
Query: 237 LAELDGSCKSAIAGFAYCKG-----------STLYFYGIVLASDGKIFHEVSRNGNR 282
LA L+ C + + A G + + G+V ++DG +++ G+
Sbjct: 235 LATLEAGCSAPVGALADFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGHV 291
>gi|134055399|emb|CAK43953.1| unnamed protein product [Aspergillus niger]
Length = 346
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 99/334 (29%), Positives = 143/334 (42%), Gaps = 30/334 (8%)
Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54
M + R+GTR S LAL A L H P + +GD +
Sbjct: 1 MSQNTTTTVQELRLGTRNSKLALVQAEHVSKELTSAH--PGVQFPWQTVVVRGDADKSSP 58
Query: 55 LTEIGG-----KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+ G K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D
Sbjct: 59 FLKFAGPSDAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDA 118
Query: 110 FISH-----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN- 163
+ L L SV+GTSS RRKALL + V + RG + TRL KL++
Sbjct: 119 LVIKEGLRSQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDP 178
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I
Sbjct: 179 EGPFSAIILATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIE 238
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHE 275
T ER+ L L G C S +A + + L G ++ G
Sbjct: 239 DLVTRRICLAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDGTIIHPHGTTLLS 298
Query: 276 VSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306
G DA +G AQ + + +
Sbjct: 299 ERTTAEVGTDEDAEALGATVAQQLLKNGGQALLE 332
>gi|262341328|ref|YP_003284183.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272665|gb|ACY40573.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 309
Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 149/307 (48%), Gaps = 9/307 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RIGTR SPLA+ A + + L + + ++GD I N + + G
Sbjct: 2 KKIIRIGTRNSPLAVFQAQKVQKLLKKEGYFSH----LFKIKSEGDLIQNVPIHALKHVG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121
+FT+++ ++SGEID AVHS KD+P L +G+ +SA+L RE D + + L D
Sbjct: 58 VFTKKLTNIMLSGEIDMAVHSLKDVPINLPEGIILSAFLKRESFFDSLVYKGSSDFLYDP 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+H+VI T S+RR A +ID RG I TRL KL N+ L A G++RL
Sbjct: 118 KIHAVIATGSIRRSAFWKNRYPHHGLIDLRGNINTRLKKLQNSSWKGALFAQVGLERLGI 177
Query: 182 EKVIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K ++ PSPGQG I + T L+K ++ +T S N ER FL
Sbjct: 178 LNNFKCLNCKILDWMIPSPGQGIIVVSTLEKKDSINSLIKKLDDIETRLSANIERQFLKT 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C S I A K +YF G++L+ DG + +R G D IG A+ I
Sbjct: 238 LGGGCISPIGAHAKIKNKIIYFTGMLLSLDGMHKIKKTRIGTNYD--LIGFQCAEEILKE 295
Query: 300 SNKNVFN 306
+ +
Sbjct: 296 GGREILE 302
>gi|304315023|ref|YP_003850170.1| porphobilinogen deaminase [Methanothermobacter marburgensis str.
Marburg]
gi|302588482|gb|ADL58857.1| porphobilinogen deaminase [Methanothermobacter marburgensis str.
Marburg]
Length = 289
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 94/288 (32%), Positives = 146/288 (50%), Gaps = 6/288 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LAL L ++ I + TKGDRI + L + +GLFT E+
Sbjct: 4 GTRGSRLALVQTDHVIDMLSEIC---GERIERRIIKTKGDRIKDSQLYSMDSRGLFTREL 60
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ ++ E+D AVHS KD+P+ L L I+A PRE +V +S +L + +G
Sbjct: 61 DIAVLEEEVDFAVHSLKDVPSDLDPELVIAAVPPRESPNEVLVSR--FDWDELPPAAKLG 118
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSSLRR+A + + + RG I+TR+ K+ + HA ++A AG+KRL E IK+
Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMEGEVHATIMAEAGLKRLGLENYIKKR 178
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
+E F P+ GQGA+ + T + + ++ I H + V E+ L EL C+ +
Sbjct: 179 FTLEYFTPAAGQGALAVITR-RDSELMVSIEKITHYPSHQEVTAEKTLLRELGAGCQCPL 237
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A + Y ++L DG+I V+ G+ A IG+ AA+ +
Sbjct: 238 GVIARASDGKINLYAVLLTRDGEILKRVNVKGSVDKAEEIGKKAAKEM 285
>gi|58040313|ref|YP_192277.1| porphobilinogen deaminase [Gluconobacter oxydans 621H]
gi|58002727|gb|AAW61621.1| Porphobilinogen deaminase [Gluconobacter oxydans 621H]
Length = 357
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 159/313 (50%), Gaps = 9/313 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGG 60
K P R+G+R SPLAL + L + +ST+GDR + L EIGG
Sbjct: 40 KLPLRVGSRASPLALVQTRNFLTRLTRFCPVLRDMGAFQEYQISTEGDRNLVQRLAEIGG 99
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EI + L +G ID AVHS KD+ T L GL ++ L RED RD I D
Sbjct: 100 KGLFAKEIHEALAAGRIDFAVHSLKDLETNLPPGLVLACTLKREDARDALILRDRDVKVD 159
Query: 121 -------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
L ++IG +S+RR+A +L R D+ RG ++TRL+KL A LLA
Sbjct: 160 PQRPYDCLPEGALIGCASVRRQAQMLHVRPDLRFCLLRGNVQTRLDKLRAGACEATLLAL 219
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG++RL E + +L + P+ GQG + + ++ + +EL+ I + E
Sbjct: 220 AGLRRLGMEDRVDVVLEPDQMLPASGQGIVGVTVRESDLELRELLSAIEDPEARAVSTAE 279
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
RA LAELDGSC++ I G+A + L G++ + DG G +A +G + A
Sbjct: 280 RALLAELDGSCRTPIGGYARIENGVLKLSGMIASEDGTFLLRREIEGAPLEAARLGTELA 339
Query: 294 QYIRFISNKNVFN 306
+R + ++F+
Sbjct: 340 DELRRDTPAHIFD 352
>gi|114640812|ref|XP_001149046.1| PREDICTED: porphobilinogen deaminase [Pan troglodytes]
Length = 276
Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 6/243 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVTTLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256
Query: 240 LDG 242
L G
Sbjct: 257 LVG 259
>gi|227487191|ref|ZP_03917507.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092849|gb|EEI28161.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51867]
Length = 290
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 13/301 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R +L+ ++ + ++T GD+ + + +IG G+F
Sbjct: 2 TLRIGTRGSKLATTQAGHIRDALIRA----GYDAELTIITTPGDKNLS-PVQKIG-IGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + + + EID AVHS KD+PT +GL Y RE + I+ +L L
Sbjct: 56 TQALREAMDRDEIDIAVHSCKDLPTGQPEGLATI-YPVRETPCEALIARDGLTLDQLPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 115 AKVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + P+P QG + +E+ + L I+ T S ERA L+ L C
Sbjct: 175 ATQVFDPTYLMPAPAQGILAVESRTHVDAISTL---IDDHAT-LSAQAERAVLSTLQAGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A ++ G + A DG + G D + +G A+ +R + +
Sbjct: 231 TAPLAAYSTVSGDEITLTAGAFALDGSKQIVETATGT--DPVALGTTVAEKLRARGAEEI 288
Query: 305 F 305
Sbjct: 289 I 289
>gi|189184545|ref|YP_001938330.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda]
gi|238054423|sp|B3CUP9|HEM3_ORITI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189181316|dbj|BAG41096.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda]
Length = 298
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 109/293 (37%), Positives = 163/293 (55%), Gaps = 7/293 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LAL A + D+ N +IIP+ T GD I N+ L +IGGKGLF
Sbjct: 2 IIRVGSRASRLALIQAQAVVQKINDLL---GLNAIIIPIKTTGDLIQNKNLYDIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L++ ID AVHS KD+P L GLQ++A L R ++ D+ +S A + DL L
Sbjct: 59 LKEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGNVGDMLVSKIANKITDLPLG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GTSS+RR+ LLR R D++++ FRG ++TR NK+ NN+ A +LA AG++RL +
Sbjct: 119 ARVGTSSVRRRIQLLRLRPDLNIVLFRGNVDTRWNKIFNNEVDATVLAAAGLQRLNYDTS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I++ ++ P+ GQG I IE ++ L INH+ TW + ER +L L+
Sbjct: 179 RFCNIISQDEMLPAIGQGVIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNAD 238
Query: 244 CKSAIAGFAYCKGSTLYFYG--IVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C I G A G+ F ++ + + F G +IG +AA+
Sbjct: 239 CNVPIGGLANYIGNN-NFEAKFMLGDYNMRYFFYSEVCGKLQHGYDIGVEAAK 290
>gi|326388534|ref|ZP_08210128.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM
19370]
gi|326206999|gb|EGD57822.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM
19370]
Length = 309
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 111/281 (39%), Positives = 154/281 (54%), Gaps = 4/281 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLA+A A ETR+ L H P + ++P+ GDRI +R L EIGGK L+T
Sbjct: 1 MRLGTRQSPLAMAQAEETRARLCAAHGWPVDAVELVPVVASGDRIQDRPLAEIGGKALWT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ L G ID AVHS KD+ T + L I+A LPR D+RDV + A S+ D+ +
Sbjct: 61 KELDAWLAEGTIDAAVHSMKDVETLRPETLTIAAVLPRADVRDVLVG--AASVADIPTGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL + +
Sbjct: 119 RVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLGKLERGEADVTLLAAAGLVRLGETGIG 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ E + P+P QGAI IE L I+ T ++ ERA L L G+C
Sbjct: 179 T-PLDAETWLPAPAQGAIGIECLAARADLLSLFAAIDDAPTHAAIRAERALLTGLGGTCH 237
Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDA 285
S IA +G T L+ + + DG E S +
Sbjct: 238 SPIAVLTRPEGDTELFLRAALFSPDGAHRVEASATFPMTEP 278
>gi|294496111|ref|YP_003542604.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219]
gi|292667110|gb|ADE36959.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219]
Length = 308
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 95/302 (31%), Positives = 155/302 (51%), Gaps = 8/302 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LALA A L+D P + T GD T+R L E+ G G F
Sbjct: 1 MIIGTRGSDLALAQAKTV-EGLLDSRGFPTTR---KIIKTSGDTFTDRPLHEVEGVGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ +++SGEID AVHS KD+PT+ L I+A + R+ D+ +++ +L +L +
Sbjct: 57 RELDDRMLSGEIDIAVHSMKDLPTERPAELSIAAVIERDSPHDLLLTNDGSTLDELPEGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT+S+RR+A LR+R D+ V D RG I TRL KL + AI+LA AG++R+ +
Sbjct: 117 IVGTTSMRRRAQFLRYRPDLDVQDLRGNINTRLKKLESGMYDAIILAEAGLQRMGW-DIE 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++F PS QG I + T +A+ L I+H ++ + ER + +++G C
Sbjct: 176 CHRLDGDNFCPSANQGTIAVVTLAGG-EAELLCSQIDHTESRIATEVERLVIRDVEGGCI 234
Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ FA G+ ++ +L+ DGK + + + + + K
Sbjct: 235 VPVGSFAEFVDNGNKIHIRAEILSLDGKRDIRLDEIIPVDNYREHAEKLGKKLVAMGGKE 294
Query: 304 VF 305
+
Sbjct: 295 LV 296
>gi|256810719|ref|YP_003128088.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86]
gi|256793919|gb|ACV24588.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86]
Length = 292
Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 12/297 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ +++ I + T GDR+ N+ L++IG G+FT
Sbjct: 2 IRIGTRGSKLALYQANKVAELLKNL----GYDVEIKIIKTTGDRVLNKKLSDIG-IGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + +
Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNKNVDFDE-NSEI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSSLRR+A L + RG ++TRL KL + AI+L+ AGI RL +
Sbjct: 116 IIGTSSLRRRAFLKFLYPNARFELLRGNVDTRLKKLKDGLYDAIVLSEAGIIRLGI-NLD 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ P+P QG I + ++ + +E++K INH+ T+ +CERA L + G C
Sbjct: 175 DFNYKRLNILPAPAQGIIAVACKRDDEEIKEILKEINHKKTYLGSSCERAALNQFGGGCS 234
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297
A L V+ D D AI +G++ + +R
Sbjct: 235 VPFGALAVYDEKNEVLKLNAGVVIEDELKTASGEVKCKIDDIDKAIELGKNIGKKLR 291
>gi|72163131|ref|YP_290788.1| porphobilinogen deaminase [Thermobifida fusca YX]
gi|123747085|sp|Q47LA7|HEM3_THEFY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71916863|gb|AAZ56765.1| hydroxymethylbilane synthase [Thermobifida fusca YX]
Length = 320
Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 13/314 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P R+GTR S +A + L +P + ++ +++ GD IT LT++GG
Sbjct: 1 MSTTPARLGTRRSTMATNQSRRVAEILTARTGVP---VELVLITSFGD-ITRAHLTQLGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L++GE++ AVHS KD+PT +G+ ++A R+D RD + D
Sbjct: 57 TGVFVSALRDALLAGEVEFAVHSLKDLPTAPTEGIVLAAVTERDDPRDALCARDGLKFAD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+
Sbjct: 117 LPPGATVGTGSPRRVAQLAALRPDLRYVPIRGNAETRLGKVASGELDAVVLAYAGLHRVG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + ++ +++ P+PGQGA+ +E + + ++H T +V ER LAE
Sbjct: 177 RLDDVTDVFDVDQVLPAPGQGALAVECRTADFTGPLRYLTAVDHLPTRAAVTAERVILAE 236
Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-------AINIGRD 291
L+ C + + +A L V+A+DG + + A +GR
Sbjct: 237 LEAGCAAPVGAYAEFVAEDRLRLRAAVVATDGSQAVRAEQTVTVTEFPDAVQAATALGRQ 296
Query: 292 AAQYIRFISNKNVF 305
A + +
Sbjct: 297 LAHDMIEQGADQIV 310
>gi|308177931|ref|YP_003917337.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117]
gi|307745394|emb|CBT76366.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117]
Length = 324
Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats.
Identities = 98/320 (30%), Positives = 142/320 (44%), Gaps = 25/320 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FR+GTR S LA L I ++ + + T+GD +T +L +GG G+F
Sbjct: 5 FRVGTRGSALATTQTGWAAQKLA---GISGLDVETVLVKTEGDVVTG-SLATLGGTGVFA 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L+ D AVHS KD+PT +GL ++A RED+RD S + L L +
Sbjct: 61 AALRQHLLDAGCDLAVHSLKDLPTAQPEGLVLAAIPAREDVRDALCSRDSLGLDQLPHGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------------NNKAHAIL 170
IGT S RR A LL +RSD ++D RG + TRL ++ A++
Sbjct: 121 KIGTGSPRRAAQLLAYRSDFEIVDIRGNVPTRLGRVKGVGKTLDDGSVGRSTQGDLDAVI 180
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH---VNNPKAQELVKVINHEDTW 227
LA AG++RL E I E L+ P+PGQGA+ +ET + + + T
Sbjct: 181 LAAAGMRRLGLEDHITEYLDPSIMLPAPGQGALALETRSAGSGHQALDAALSQFDDAHTR 240
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCD 284
V ERA L+ L+ C + I A+ G L + DG S
Sbjct: 241 MQVEAERALLSTLEAGCAAPIGALAHIDGDDLVLEAVACNPDGSETMRRSARIACSTTDA 300
Query: 285 AINIGRDAAQYIRFISNKNV 304
A +GR AQ + V
Sbjct: 301 AQQLGRSLAQSMIADGAAVV 320
>gi|325960061|ref|YP_004291527.1| porphobilinogen deaminase [Methanobacterium sp. AL-21]
gi|325331493|gb|ADZ10555.1| Porphobilinogen deaminase [Methanobacterium sp. AL-21]
Length = 290
Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 149/291 (51%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR S LA + L V I + + + GD+I N L I KG+FT
Sbjct: 1 MKVGTRGSSLATYQTKTIINELSIVT---DEKIDVEIIKSTGDKIQNSQLYNIDAKGIFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ ++ G +D AVHS KD+PT+L L+I A RE +V +S +L +
Sbjct: 58 RELDDAVLDGTVDFAVHSLKDLPTELEGDLEIVAVPERESPNEVLVSKLG--WDELPKGA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR+A + ++ RG I+TR+ K+ + + A ++A AG+ RL + I
Sbjct: 116 TVGTSSIRREAFCNHHDKEFNIKPIRGNIDTRIKKVFSGEYDATIMAEAGLNRLGLTEYI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K+ +IE F P+ GQGAI + + ++ ++ INH ++ V E+ L E+ C+
Sbjct: 176 KQRFSIEYFTPAAGQGAIAVVARS-DSDVKDDLQKINHLKSFQEVTAEKRVLLEMGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
S + A + L ++L +GKI V G+ A N+G AA+ +
Sbjct: 235 SPLGVSARINENKLKLCAVLLTQEGKIVSRVMVEGSADKASNLGLKAAKLM 285
>gi|297618662|ref|YP_003706767.1| porphobilinogen deaminase [Methanococcus voltae A3]
gi|297377639|gb|ADI35794.1| porphobilinogen deaminase [Methanococcus voltae A3]
Length = 316
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 14/305 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR S LA+ L ++ + II + T GD+ N+ L ++G G+
Sbjct: 4 TIRIGTRGSKLAMVQTNYVNEILNKEIQTNKDIDTEIIKIKTVGDKDQNKKLVDLG-LGV 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+K ++ E D AVHS KD+PT L I A PRE D+ I + L
Sbjct: 63 FTKEIDKSMLLNETDIAVHSLKDVPTLWSDELIIKAVPPRESYNDLLIWKKNRKLNVFQD 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
V+GTSS+RR A L ++ V RG ++TRL KL++ + AI++A AG+ RL
Sbjct: 123 DIVVGTSSIRRAAFLEIRYPNLDVKLLRGNVQTRLKKLDDEEYDAIIMAEAGLNRLNI-N 181
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + + P+P QGAI I T + + E+V++++ + T V ER L E G
Sbjct: 182 LEDYNYEVLNMLPAPAQGAIGIATRKADEEINEIVELLDDKKTHLEVLAERNALKEYGGG 241
Query: 244 CKSAIAGFAYCKGST--LYFYG-IVLASDGKIFHEVSRNG-------NRCDAINIGRDAA 293
C++ A L +V ++GK VS+ G + A ++G++
Sbjct: 242 CQAPFGALAVYDEEENVLSLTCDLVFEANGKNVL-VSKEGFVYCDIDDFEKAADLGKNLG 300
Query: 294 QYIRF 298
+ ++
Sbjct: 301 KLLKS 305
>gi|227549755|ref|ZP_03979804.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078141|gb|EEI16104.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM
44291]
Length = 301
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 13/305 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LA A R ++ H+ + ++T GD ++ E G G+FT
Sbjct: 2 LHIGTRGSHLATTQAGHVRDDIIAA----GHDAELTIVTTPGD--LSQAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L GE++ AVHS KD+PT + RED R+ I+ L DL +
Sbjct: 56 SALRDALFRGEVEIAVHSFKDLPTA-DEPRAHIVVPAREDNREALIARDGMQLADLPQGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG IE+R+ ++ + + AI+LAYAG+ R
Sbjct: 115 RVGTSAPRRISQLKALRPDLDIRPLRGNIESRMGRVTSGELDAIVLAYAGLLRAGYGDRA 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + +F P+P QGA+ +E ++ + + ++ + T V+ ER LA L+ C
Sbjct: 175 TQLFDASEFLPAPAQGALAVECRSDDAETRAVLDPLMDAATALQVSAERHVLATLEAGCT 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD------AINIGRDAAQYIRFI 299
+ +A A+ G L V A DG S + D A +GR+ A +
Sbjct: 235 APVAAHAFYDGGELSLRAGVFALDGSHQLVESGSVTVADTLDREAARGLGRELASRLLDA 294
Query: 300 SNKNV 304
+
Sbjct: 295 GAAEL 299
>gi|145525120|ref|XP_001448382.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415926|emb|CAK80985.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 92/309 (29%), Positives = 151/309 (48%), Gaps = 15/309 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGK 61
++ RI TR S LA+A S L II +S + GD L ++
Sbjct: 2 QRQLRIATRSSALAMAQTNYVISELKQ-------ECEIIKVSNEVGDVNLQDPLYQMPTV 54
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +SL
Sbjct: 55 GVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLHLAAYTKFEQRGDVVLLNKKYNYKSL 114
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L +GTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI R
Sbjct: 115 SELPDGLKVGTSSLRRIATIRSRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGILR 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I L+ ++F +P Q A+ I+ ++ + ++++N D ER FL
Sbjct: 175 LGLAEKISFDLDEKEFLYAPAQAALGIQCRKDDLETIGRLQILNDTDAQKRCVAERMFLN 234
Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ IA ++ C + +Y G VLA DG E +G+ + I+
Sbjct: 235 LLEGGCRLPIAVYSECREDGQVYIKGRVLAVDGSKVIEDEA---LDHFEIVGQILCEKIK 291
Query: 298 FISNKNVFN 306
+ +
Sbjct: 292 VLGGVELIE 300
>gi|261402865|ref|YP_003247089.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7]
gi|261369858|gb|ACX72607.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7]
Length = 295
Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 151/302 (50%), Gaps = 14/302 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ + + II T GD+I N+ L+EIG G+FT
Sbjct: 2 LRIGTRGSKLALYQANKVAELLKNL----GYEVEIIIKKTTGDKILNKKLSEIG-IGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ L++ EID AVHS KD+PT + L I A L R+ D+ I + L +L
Sbjct: 57 KELDLALMNNEIDIAVHSFKDVPTIWNENLMIGAVLERDSYYDLIIWDKNKDL-ELDKEI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR++ L ++ RG ++TRL KL + AI+L+ AGI RL +
Sbjct: 116 TVGTSSIRRRSFLKAMYPNVKFKLLRGNVDTRLKKLKEGQYDAIVLSEAGIIRLNIDLSD 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ PSP QG I + ++ K +++++ INH+ T+ CER L E G C
Sbjct: 176 FNYRRLDI-TPSPAQGVIAVACRRDDNKIKKILERINHKKTFLECLCERTALNEFGGGCS 234
Query: 246 SAIAGFAYCKGST--LYFYGIVLASDGKIFH-EVSRNGNRCD---AINIGRDAAQYIRFI 299
+ L V +GK+ H N D AI +G+ + ++ +
Sbjct: 235 VPFGALSIYDEDKKILTLKATVF-LNGKLKHASGKINCEIDDLDSAITLGKTIGKRLKDL 293
Query: 300 SN 301
N
Sbjct: 294 EN 295
>gi|21227846|ref|NP_633768.1| porphobilinogen deaminase [Methanosarcina mazei Go1]
gi|23821683|sp|Q8PW57|HEM3_METMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|20906258|gb|AAM31440.1| Porphobilinogen deaminase [Methanosarcina mazei Go1]
Length = 316
Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/300 (32%), Positives = 149/300 (49%), Gaps = 9/300 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64
IGTR S LALA L + I + T GDR T+R L + GG G F
Sbjct: 1 MIIGTRGSQLALAQTENVARLLKEK----GVETSIKIIKTSGDRFTDRPLHAVSGGVGAF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E++ +++GEID AVHS KDMPT K + A L R+ D+ +++ L +L
Sbjct: 57 VRELDDVMLAGEIDIAVHSMKDMPTIRPKAIPTVAVLKRDTPFDILLTYDGTPLDELPEQ 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S+IGTSSLRR A + R+R DI + RG I+TRL KL + I+LA AG++R+ E +
Sbjct: 117 SIIGTSSLRRTAQIRRYRPDIITQNLRGNIDTRLRKLREGQYDGIMLAKAGLERMGWE-I 175
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
EI + + F PSP QG + + T +A+ V +++H ++ ER +AEL G C
Sbjct: 176 EGEIFSPDFFCPSPNQGTVAVVTREG-TEAEAAVSMLDHTESRIVTEIERILIAELGGGC 234
Query: 245 KSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+ + +A ++ VL+ DG+ + I R+ + + +
Sbjct: 235 TTPVGSYAEITPDRQEIHVRAEVLSLDGREAIRIDEFIPLRGGIEKARELGHRLVEMGGR 294
>gi|169614115|ref|XP_001800474.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15]
gi|111061407|gb|EAT82527.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15]
Length = 397
Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 102/346 (29%), Positives = 150/346 (43%), Gaps = 47/346 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60
P IGTR S LA A ++L H P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSTLAQIQARAVAAALKSAH--PERTYNICPVVVEGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116
K L+T E+E L G++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELETMLEKGDLDIIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPGDT 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYA 174
+L L + IGTSS+RR A L R + D RG + TRL KL+ AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRAAQLRRLYPHLQFADLRGNVGTRLGKLDKEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G++R+ E I + L+ + GQGA+ IE ++ + L+ I E T + +
Sbjct: 208 GLRRMGLESRITQYLDSATGGMLHAVGQGALAIEIRKDDETMKALLNKIACERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262
ERA L L+G C I +G L
Sbjct: 268 ERALLRALEGGCSVPIGIETSWRGGKGLAVGAQPAKDYDKHGNAVEEAEPDLDDQELVMK 327
Query: 263 GIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+V++ DGK E V + ++ +A +GR+ A+ + +
Sbjct: 328 TMVVSVDGKDAVEHDAVRKVRSKEEAEEMGREVAKILIEKGADQIL 373
>gi|163814461|ref|ZP_02205850.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759]
gi|158450096|gb|EDP27091.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759]
Length = 350
Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 104/311 (33%), Positives = 164/311 (52%), Gaps = 28/311 (9%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK
Sbjct: 38 QKKTVKVGTRGSKLALAQTELVIKALNE--RFPQIDFQMVTMSTRGDRDTSRALLEFGGK 95
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
+F EE E+ ++ G+ID AVHSAKDMP ++++GL IS LPR +DVFI + +S D
Sbjct: 96 AVFVEEFEEAILKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDVFIYKSGRSF-DR 154
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180
V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL
Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYPNAVCKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214
Query: 181 ---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
K+++ L+ E P+ QG I IET + +A ++V+ IN +
Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYLSTESMLPAACQGIIAIETRTSG-EAYDMVRAINDTE 273
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI---VLASDGK-----IFHEVS 277
+ + CERA L+ L+ C I ++ KG + + +SD + H +
Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELKGKHMKLSLMKVDAASSDKEKDEEIQIHRKT 333
Query: 278 RNGNRCDAINI 288
GN + +
Sbjct: 334 VEGNTSEWEQL 344
>gi|83308731|emb|CAJ01641.1| porphobilinogen deaminase (ec 4.3.1.8) [Methylocapsa acidiphila]
Length = 293
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 122/292 (41%), Positives = 169/292 (57%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA A E R L +I I I+ + T GD I +R L+E GGKGLFT+E++ L+
Sbjct: 1 MALAQAHELRGRLAASSRIDGDAIEIVVIKTSGDVIQDRALSEAGGKGLFTKELDFALMR 60
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
GE+D AVHSAKD+PT L + I+ YLPRED+RD +IS A +L +V+GT+SLRR
Sbjct: 61 GEVDIAVHSAKDLPTSLPGEIAIAGYLPREDVRDAWISPKAAHPLELPAGAVVGTASLRR 120
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
A++ R R D+S++ RG +ETRL KL + A LLA AG+KRL E +L+ +F
Sbjct: 121 GAMVKRLRPDLSIVLLRGNVETRLGKLAAGEVDATLLALAGLKRLGLEDRATAVLDAGEF 180
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+ GQGAI I + A + + + T ++ ERAFL LDGSCK+ I A
Sbjct: 181 VPAAGQGAIAITLRAGDQAALDALAPVLDAATGAALAAERAFLHVLDGSCKTPIGAHARL 240
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G + F+G+VL DG F EV +G+ +A +G A +R F
Sbjct: 241 AGDEINFHGVVLKPDGSQFFEVVLSGSAREAAALGAAAGDDVRARLPAAFFE 292
>gi|114568594|ref|YP_755274.1| porphobilinogen deaminase [Maricaulis maris MCS10]
gi|114339056|gb|ABI64336.1| porphobilinogen deaminase [Maricaulis maris MCS10]
Length = 321
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 12/305 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV----IIPLSTKGDRITNRTLTEI 58
+P I TR SPLAL A + ++ L + + I+ L + GDRI +RTL E
Sbjct: 5 SRPLAIATRRSPLALVQARDVQAKLAAQCGLSGEDAERCFPILGLVSTGDRIQDRTLIEA 64
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS- 117
GGKGLFT+EI++ + G AVHS KD+PT L G+ + A L RED RD+ I+ ++
Sbjct: 65 GGKGLFTKEIDEAQLDGRAAFAVHSMKDVPTVLPDGIVLGALLEREDPRDMLIARDGETR 124
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L DL IGT+SLRR+A LL R D+ V+ RG ++TRL KL + HA LA AG+
Sbjct: 125 LADLPEGVTIGTASLRRQAQLLHKRPDLHVVPLRGNVDTRLGKLADGGIHATFLARAGLN 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + + +++ L ++ P+ QGA+ + + +A V ++H DT +V ERAFL
Sbjct: 185 RLGRAEALRDPLEADEMLPAAAQGAVGVAIRDGDEEAASYVAGLHHRDTELAVLAERAFL 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCDAINIGRDA 292
ELDGSC++ IA ++ F G VL DG+ A G+D
Sbjct: 245 FELDGSCRTPIAAH--VNKVSMDFIGEVLTPDGQQSWRRQIRFDMTHATPDSARQAGQDL 302
Query: 293 AQYIR 297
+ +R
Sbjct: 303 GRAVR 307
>gi|146296661|ref|YP_001180432.1| porphobilinogen deaminase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|254800238|sp|A4XK06|HEM3_CALS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145410237|gb|ABP67241.1| hydroxymethylbilane synthase [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 290
Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 150/295 (50%), Gaps = 6/295 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG R S L+ + +P+ TKGD ++L + G+
Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L
Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGVGFYQLKP 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 119 NAKIGTSSLRREVHLKNLRQDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ I ++ + P PGQGAICIE ++P + ++ IN D + ER L L G
Sbjct: 179 HVSYIFDVNEITPCPGQGAICIECLKDSPY-KNILSKINDADAYIQTQFERLVLKFLGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C S+I F +Y + +L+ D + S G++ D +++ + ++
Sbjct: 238 CHSSIGVFCKTDQDKIYAFASILSGD--KLIKASIEGDKDDFLSLANKLSNMLKS 290
>gi|147920614|ref|YP_685587.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I]
gi|121683115|sp|Q0W5T2|HEM3_UNCMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|110620983|emb|CAJ36261.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I]
Length = 303
Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 103/296 (34%), Positives = 142/296 (47%), Gaps = 6/296 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A + R L + I + T GD + L + G G F
Sbjct: 1 MRIGTRGSKLALAQAEKVRRLLKEQ----GVEATITVIKTSGDVQKDSPLYMMKGYGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ L+ E+D AVHS KD+PT + L +A L RE DV + A+ L DL +
Sbjct: 57 REIDDLLLKNEVDLAVHSLKDIPTVRPENLVTAAVLKRESALDVAVIRNAERLADLPEGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR A++ R + D RG ++TRL KL + + AILLA AG+ RL +
Sbjct: 117 VVGTSSTRRAAMIYRHYPGLVTKDIRGNVDTRLRKLRDGEYDAILLAEAGLIRLGL-DLK 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ +F P+ QG I I P+A E+VK +N E TW ER A LDG C
Sbjct: 176 VERLDPYNFVPAANQGVIAIVARQGTPEA-EVVKELNDETTWIETRVERIIAAGLDGGCV 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A G + G VL+ DG+ V + ++ +
Sbjct: 235 VPMGVYATRVGDEIDVIGEVLSLDGRQQVRVRETIPVAGCEEHAKQVSEKLVLAGG 290
>gi|20094183|ref|NP_614030.1| porphobilinogen deaminase [Methanopyrus kandleri AV19]
gi|19887202|gb|AAM01960.1| Porphobilinogen deaminase [Methanopyrus kandleri AV19]
Length = 305
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 84/297 (28%), Positives = 148/297 (49%), Gaps = 3/297 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S LA+ E L + I+ ++GD + +R L ++G KG+F
Sbjct: 11 TIRVATRSSRLAIIQTREVIELLERESPR-DVEVEIVKTKSRGDVVRDRPLHKLGEKGVF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+L
Sbjct: 70 VKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSRHG-GLKELPRG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL
Sbjct: 129 ATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLGMTSE 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL C
Sbjct: 189 VSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVRELGVGC 248
Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ G + + DG H + G+ D + A+ +
Sbjct: 249 SEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVVREAVSQAREVLSDG 305
>gi|307826350|ref|ZP_07656554.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732591|gb|EFO03464.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 321
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ +K RI TR SPLAL A L P ++ ++T+GD+I + L +IGG
Sbjct: 6 LTEKIIRIATRRSPLALWQAEHVAERLER--TFPGCRTELVKMTTQGDKILDAPLAKIGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL ++A L RED D F+S+ +L D
Sbjct: 64 KGLFVKELEQGMLEGLADIAVHSMKDVPVEFPEGLHLAAILIREDPTDAFVSNHYATLHD 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++ IGTSSLRR+ + + ++ RG + TRL+KL++ + AI+LA AG+KRL
Sbjct: 124 LPANARIGTSSLRRQCQIKELYPEAEILSLRGNVNTRLSKLDSGEYDAIILASAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHV 209
+ I + L+ P+ GQGAI IE +
Sbjct: 184 MAERITQCLDTSVSLPAIGQGAIGIECRI 212
>gi|158518657|sp|Q8TXC8|HEM3_METKA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
Length = 298
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 4/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+ TR S LA+ E L + I+ ++GD + +R L ++G
Sbjct: 1 MSE-TIRVATRSSRLAIIQTREVIELLERESPR-DVEVEIVKTKSRGDVVRDRPLHKLGE 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+
Sbjct: 59 KGVFVKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSRHG-GLKE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL
Sbjct: 118 LPRGATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL
Sbjct: 178 MTSEVSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVREL 237
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + G + + DG H + G+ D + A+ +
Sbjct: 238 GVGCSEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVVREAVSQAREVLSD 297
Query: 300 S 300
Sbjct: 298 G 298
>gi|119871570|ref|YP_929577.1| porphobilinogen deaminase [Pyrobaculum islandicum DSM 4184]
gi|158512988|sp|A1RQK2|HEM3_PYRIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|119672978|gb|ABL87234.1| hydroxymethylbilane synthase [Pyrobaculum islandicum DSM 4184]
Length = 301
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 97/301 (32%), Positives = 149/301 (49%), Gaps = 9/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F
Sbjct: 2 KIRVATRGSKLSLIQTEELLAQIKAVE--PDVQFEIVVVKTTGDLIQDKPLFQIGVKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D AVHS KD+P++L GL ++ + R DV IS +L+ L
Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSELTPGLVLAGFSKRAPPHDVLISRGGYTLETLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG++RL
Sbjct: 120 AVVGTSSVRRAEFLKAVRPDVEVKPLRGNVDTRVGKVLSGQYDAAVMAAAGLQRLYGSSP 179
Query: 185 IKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ +E+ PP PGQG + + +L+K + + ERAFLA +
Sbjct: 180 PVSIVPLRVEEVPPPPGQGIVVAVVKEEDSWLIDLLKKASDKTAAIEATAERAFLAGVGA 239
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C AI G A +L F A G + V G D + +G+ AAQ I +
Sbjct: 240 GCHVAIGGVAKLTPQGSLEFTAGYAA--GGAKYVVKVFG--EDPVEVGKRAAQLIAEVRQ 295
Query: 302 K 302
K
Sbjct: 296 K 296
>gi|294085042|ref|YP_003551802.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664617|gb|ADE39718.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 347
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 108/313 (34%), Positives = 158/313 (50%), Gaps = 20/313 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P + +R S LA+A A R +L V I P +TKGD I +R L E+GGKG+F
Sbjct: 42 PLVLASRASTLAMAQAELVRVALKPVASR------IEPFTTKGDLILDRPLVEVGGKGVF 95
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L++GE D AVHS KDM + G I A LPRED RD + + L L
Sbjct: 96 IKELERSLLAGESDAAVHSMKDMESDFAAGTMIGAVLPREDRRDALVG-SYADLDALPDG 154
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GTSS+RR+ALLL R D+ + RG I R+ KLN AI+LA AG+KRLK +
Sbjct: 155 AIVGTSSVRRRALLLHHRPDLRIKLLRGNINKRIAKLNQGDYDAIILAVAGLKRLKLS-L 213
Query: 185 IKEILNIEDFPPSPGQGAICIETH----------VNNPKAQELVKVINHEDTWDSVNCER 234
L+ + P + QGA+ ++ + + + + ++ V ER
Sbjct: 214 DYTPLDEKLMPTAAAQGALAVQLCDPSLAQGEKAIRQQAVFDAISPLACVNSTIEVTAER 273
Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
A LA LDGSC + IA A TL G+VL+SDG + ++ +A+ +G
Sbjct: 274 AMLAHLDGSCHTPIAASARFVDDKTLRLDGMVLSSDGSAAFRRTMTASKDEAVALGIKVG 333
Query: 294 QYIR-FISNKNVF 305
+ +
Sbjct: 334 VALLDDAGGRGFL 346
>gi|241762462|ref|ZP_04760539.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241372964|gb|EER62631.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 308
Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 156/301 (51%), Gaps = 9/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+
Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I SL+ L
Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIGIP--SLEVLPYS 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GT+S RR A + R DI + RG I+TRL KL N + A LLA AG+ RL + V
Sbjct: 122 GCVGTASPRRAAQIRCIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ ++ P+ GQGAI IE + A E V +I+H T +V ER L L+ C
Sbjct: 182 GY-DVPLDQMLPAAGQGAIGIEALA-DSAAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRDAAQYIRFISNKN 303
S IA FA + + +GK + + + DA +G + S
Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGKFSASIDKEISQPSDAFEVG----SLLLNQSPPE 295
Query: 304 V 304
V
Sbjct: 296 V 296
>gi|296118431|ref|ZP_06837010.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM
20306]
gi|295968572|gb|EFG81818.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM
20306]
Length = 300
Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 7/300 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+IGTR S LA A R + D + ++T GD N E G G+FT
Sbjct: 6 KIGTRGSKLATTQAGHVRDWITDNGTPS----ELHIVTTAGDV--NMAPVERIGVGVFTH 59
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
+ + L E D AVHS KD+PT RED R+ I+ +L DL +
Sbjct: 60 ALREALHEQECDIAVHSFKDLPTA-PDERFHLIVPKREDNREALIARDGLTLDDLPEGAK 118
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTS+ RR + L R D+ + RG IETR++ + N + A++LAYAG+ R
Sbjct: 119 VGTSAPRRISQLKAMRPDLDIRPLRGNIETRMSYVTNGELDAVMLAYAGLVRAGYADRAT 178
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
++ + + P+P QGA+ +E + + + V I ERA L L+ C +
Sbjct: 179 QVFSPDVLMPAPAQGALAVEVNAQDAELVNAVNAIADAKAGLQAAGERAILRRLEAGCTA 238
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+A + + + +G V DG S G ++ +G A+ + +
Sbjct: 239 PVAATSVIEDDLITVHGGVFQLDGSRQAVASETGPLENSYELGIKVAEALIEQGAFEIIE 298
>gi|227505107|ref|ZP_03935156.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940]
gi|227198310|gb|EEI78358.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940]
Length = 295
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 8/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA + R L + ++T GD N E G G+FT
Sbjct: 2 FKIGTRGSKLATTQSGHVREWLKAN----GFESELHIVTTHGDV--NMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + L GE D AVHS KD+PT + R+D+R+ ++ +L L +
Sbjct: 56 QALREALYGGECDIAVHSFKDLPTA-ADERFLLVVPERQDVREALVARDGLTLAQLPEGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG I+TR+ K+ + + A++LAYAG+ R + +
Sbjct: 115 RVGTSAPRRISQLKAMRPDLDIQPLRGNIDTRMGKVTSGELDAVVLAYAGLVRADYQDMA 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ + F P+P QGA+ IE V + A ++ + E + ER L+ L+ C
Sbjct: 175 SEVFAPDTFMPAPAQGALAIEA-VKDSAAARAIETLIDEQASAASLGERTVLSRLEAGCT 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + + L G V A DG S G DA +G ++ + +
Sbjct: 234 APVAATSTIENGQLTVRGGVFALDGSRQLLASATGPLSDAAQLGSAVSEELFSRGAAELL 293
Query: 306 N 306
Sbjct: 294 G 294
>gi|119587854|gb|EAW67450.1| hydroxymethylbilane synthase, isoform CRA_d [Homo sapiens]
Length = 321
Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 94/337 (27%), Positives = 137/337 (40%), Gaps = 75/337 (22%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQ
Sbjct: 197 GWHNRVGQILHPEECMYAVGQ--------------------------------------- 217
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
+G C +A K LY G V + DG + + +G D
Sbjct: 218 -EGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 276
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 277 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 313
>gi|297564830|ref|YP_003683802.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
gi|296849279|gb|ADH62294.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
Length = 294
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 17/304 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IGTR S LALA L + P ++ NR+ G
Sbjct: 2 RVIVIGTRGSLLALAQTRWVVERLKE--NWPEVEFRTKTIT-------NRSEDPAAG--- 49
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
++ L EID A+H+ +D+P GL ++A R D R+ F+ +A+ L+DL
Sbjct: 50 ----LQDALRKREIDIALHALRDLPPAQADGLHLTAVTRRVDPREAFVGRSAKRLEDLPD 105
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+G SLRRKA LL +R D+ V + +G ++ +L L + AI++ + RL
Sbjct: 106 GAVVGAPSLRRKAQLLAYRPDLVVRETKGDVDDQLEALGTGEYDAIIMPAGSLLRLDLRN 165
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + ++ E P+PGQGA+ +E + + A+EL +NH + D V ERAF+A L
Sbjct: 166 RIDQFVDPEILLPAPGQGALGLEVRLGDDYAEELAYSLNHRPSSDRVCAERAFVAALGVG 225
Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
++ +A A+ + TL G V + DG+ G+ +A+ +G + AQ + K
Sbjct: 226 LEAPVAALAFVEDDGTLRLEGGVFSPDGREMIRGEIEGDASEAVELGSELAQDLLAEGGK 285
Query: 303 NVFN 306
+
Sbjct: 286 EILE 289
>gi|313835649|gb|EFS73363.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA2]
gi|314928321|gb|EFS92152.1| porphobilinogen deaminase [Propionibacterium acnes HL044PA1]
gi|314970250|gb|EFT14348.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA3]
Length = 337
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 94/329 (28%), Positives = 145/329 (44%), Gaps = 32/329 (9%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ + ++T+GD + +L +GG G+F
Sbjct: 7 IRLGTRASTLATTQSEMVAGMLRS----EGLDVDLTTITTRGDT-STTSLAAMGGIGVFA 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L DL +
Sbjct: 62 SAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLNDLPQGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAG 175
+GT S RR A LL R D+++ID RG ++TRL ++ A++LA +G
Sbjct: 122 SVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVVLAASG 181
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232
+ RL V+ E LN P+P QGA+ +E + + + + I+ T +
Sbjct: 182 LARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTRLAATA 241
Query: 233 ERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSR 278
ERA L+ L+ C + I A K L +V A DG
Sbjct: 242 ERAVLSHLEAGCAAPIGALAQLKPAPGKSPEVLTLDVVVTAVDGSRTIREQVSVELPEEV 301
Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307
+ A +G AA+ + +V +
Sbjct: 302 DPALAAAHTLGMTAAEELLDDGAADVADL 330
>gi|325954067|ref|YP_004237727.1| porphobilinogen deaminase [Weeksella virosa DSM 16922]
gi|323436685|gb|ADX67149.1| porphobilinogen deaminase [Weeksella virosa DSM 16922]
Length = 306
Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 140/308 (45%), Gaps = 16/308 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR SPLAL A + + L I IIP+ ++GD + + +G G+
Sbjct: 2 KKIRIGTRQSPLALWQANKVAALLSKK----GCEIEIIPIKSEGDLNLKQPIYSLGITGV 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L++ +ID AVHS KD+PT L +GL + A+ R + D+ + +
Sbjct: 58 FTKSLDIALLNNKIDIAVHSLKDVPTVLPEGLALKAFPERANSSDILVYKSNDIFT--KT 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180
H I T SLRR+A L + +++D RG ++ RL KL +N + A AG+ R +
Sbjct: 116 HRTIATGSLRRRAFWLHRYPEDTLVDLRGNVQLRLQKLQDNDWDGAIFAMAGLDRSEIIA 175
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I+ +P QG + + + IN+E+ ER FL
Sbjct: 176 DLENRKLHYSTIDWMLAAPSQGILGVVAREDFD-----FPSINNEECELYATVERQFLNV 230
Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C + I F G +L+ DGK EV NR + GR A+
Sbjct: 231 LEGGCTAPIGALVSPLSADMYRFQGTILSLDGKEKIEVVDQFNRSEYKEFGRKMAEKCLE 290
Query: 299 ISNKNVFN 306
K + +
Sbjct: 291 QGAKQLID 298
>gi|255533333|ref|YP_003093705.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366]
gi|255346317|gb|ACU05643.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366]
Length = 526
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 10/261 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K IGTR S LAL A + L + + + T+GD+I N L ++ GKG
Sbjct: 2 KRLIIGTRGSDLALWQANFIKDKLAAI----GVEAELKIIKTQGDKILNLRLDKLEGKGF 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QSLK 119
FT+E+E++L+ G ID AVHS KD+PT GL I+A RED ++ +
Sbjct: 58 FTKELEEELLGGTIDIAVHSHKDLPTVHPAGLTIAAVTEREDPSELLLILKDCVSINHKL 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +++GTSS RRKA LL R D+++ D RG + TR+ KL + AILLA AG+ RL
Sbjct: 118 SLKKGAMVGTSSNRRKAQLLALRPDLNIEDLRGNVPTRIQKLRDEDYDAILLARAGVNRL 177
Query: 180 K--KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ E+++ + P+P QGA+ I+ N + ++++ INH +T + + ER L
Sbjct: 178 NIDLSEFHVEVVDTTELVPAPAQGALAIQIRENENELFDILQQINHSETAEEIAIERKVL 237
Query: 238 AELDGSCKSAIAGFAYCKGST 258
+G C + + +
Sbjct: 238 NLFEGGCHMPLGCYCKKEDGQ 258
>gi|119587853|gb|EAW67449.1| hydroxymethylbilane synthase, isoform CRA_c [Homo sapiens]
Length = 304
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 94/337 (27%), Positives = 137/337 (40%), Gaps = 75/337 (22%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+
Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL+ E+ + GQ
Sbjct: 180 GWHNRVGQILHPEECMYAVGQ--------------------------------------- 200
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
+G C +A K LY G V + DG + + +G D
Sbjct: 201 -EGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 259
Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 260 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 296
>gi|302695979|ref|XP_003037668.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8]
gi|300111365|gb|EFJ02766.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8]
Length = 358
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 88/327 (26%), Positives = 145/327 (44%), Gaps = 22/327 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGG 60
+ + F + +R SP+A A + +++L + P +ST GD+ + L +GG
Sbjct: 5 QPRTFVLASRKSPMAQAQTVQVQAALRALDTSPSAPKFETSFMSTAGDKNQVQALYFLGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-- 118
K L+T ++E L D VHS KD+PT L +G ++ R++ DV
Sbjct: 65 KELWTGDLEVALKERAADMLVHSLKDVPTVLPEGFVLAGISERDEPVDVMCVKAGMPWRT 124
Query: 119 -KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAG 175
++L SV+GTSS+RR A+L R + +D RG I TRL KL++ A++ A AG
Sbjct: 125 PEELPEGSVVGTSSVRRIAMLKRRFPHLKFLDVRGNIATRLAKLDDPALPYAALIAAKAG 184
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ + I L + + GQGA+ IE ++ +A L K I H + ERA
Sbjct: 185 LVRVNLQHRITCDLAPPTYSYAVGQGALGIEVRADDTEALALCKRITHWPSLWRCRAERA 244
Query: 236 FLAELDGSCKSAIAG-------------FAYCKGSTLYFYGIVLASDGKIFHEVSRNG-- 280
L EL+G C + A + L V + DG +
Sbjct: 245 CLRELEGGCSVPVGVVSAIEIENEGEGEEAVGRAGVLSLTAGVTSVDGTEHVQHEIREHV 304
Query: 281 -NRCDAINIGRDAAQYIRFISNKNVFN 306
+ +A +G A+ ++ + +
Sbjct: 305 RSVEEAEALGVRMAKTLKQNGAQKILE 331
>gi|114329088|ref|YP_746245.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1]
gi|114317262|gb|ABI63322.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1]
Length = 344
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 107/315 (33%), Positives = 156/315 (49%), Gaps = 10/315 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLSTKGDRITNRTLTEI 58
M P R+GTR SPLAL + L I ++T GDR+ +R L EI
Sbjct: 28 MHGLPLRVGTRASPLALVQTRAFLARLRSFCPILRDMEVFEEHQINTTGDRVQDRRLAEI 87
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +EI + L ID AVHS KD+ T+L G+ ++ L RED RD I +
Sbjct: 88 GGKGLFAKEIHEALADRRIDFAVHSLKDLETQLPPGIVLACTLKREDARDAIILPPGFTP 147
Query: 119 KD-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171
L +++GTSS+RR+A L R D+ RG ++TRL KL + A LL
Sbjct: 148 PPPGDPFSVLQQGALVGTSSVRRQAQLAHARPDLRFATIRGNVQTRLAKLARGECDASLL 207
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++RL E+ +L+ E P+ QG + + ++ ++L+ I +
Sbjct: 208 ALAGLRRLDMEQAASVVLDTEIMVPAACQGIVGVTVREDDYALRDLLAGIEDREAKAVST 267
Query: 232 CERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
ERA L LDGSC++ I G A G L+ G+V A DG + G +A +G
Sbjct: 268 AERALLNLLDGSCRTPIGGHARILSGGVLHLTGLVAAEDGSFLLRRTLQGAVSEAEALGA 327
Query: 291 DAAQYIRFISNKNVF 305
+ + +R S ++F
Sbjct: 328 ELGRSLRADSPPDIF 342
>gi|325108657|ref|YP_004269725.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305]
gi|324968925|gb|ADY59703.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305]
Length = 329
Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 22/322 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LAL A + L H P N+ ++ +ST+GD L +GG G+F
Sbjct: 7 TVRIATRSSELALWQATHVAALLRAEH--PDINVELVDVSTQGDADQRAPLWSMGGTGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKL-LKGLQISAYLPREDIRDVFISHT--------A 115
T+E+++ ++ G D AVHS KD+PT++ L ++A RE D + A
Sbjct: 65 TKEVQRTVLDGMADLAVHSLKDLPTEIVDPDLTLAAVPEREQRWDALVLRNDLKGDVDPA 124
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L L + IG+ SLRR+A L R D+ +++ RG + TRL KL+ + AI+LA AG
Sbjct: 125 DPLASLQDGARIGSGSLRRRAQLRAQRPDLKLLEIRGNLNTRLRKLDEGEYDAIILATAG 184
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + + L P+ GQGA+ +E ++ + ++L++ +N + + + ER
Sbjct: 185 LLRLGWNERLSCRLQPPVMFPAVGQGALGLECRTDDEQTRKLLESLNDPEARLATHAERR 244
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD----------- 284
L L C + + +VL+ DG + + + D
Sbjct: 245 LLNSLRAGCHAPVGVNCERAEGRFTLSSVVLSPDGAHQVDAEDSVDLGDDWANWQEKLSE 304
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
+G A+ + + +
Sbjct: 305 VGKLGEKVAEVLLEHGAQELIE 326
>gi|317507248|ref|ZP_07964994.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974]
gi|316254442|gb|EFV13766.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974]
Length = 309
Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 97/305 (31%), Positives = 151/305 (49%), Gaps = 10/305 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A R ++ + ++ ++T GDR++ + EIG G+FT
Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRAL----GEQAELVIVNTIGDRVSG-PIVEIG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++ EID AVHS KD+PT + A R D RDV +S + L DL S
Sbjct: 56 SALRDALLADEIDVAVHSLKDLPTAQDPRFSLVAVPERADPRDVLVSRSGSRLADLPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L R+D+ + RG +++R+ K+ + AI++A AG+ RL +E+
Sbjct: 116 AVGTGAPRRSAQLRLARADLEIQPIRGNLDSRMRKVATAECDAIVVARAGLLRLGREQEA 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
EIL+ P+PGQGA+ +E P E++ ++HE + + ERA LAEL C
Sbjct: 176 TEILDPAVMLPAPGQGALAVECRSEAPVSLTEVLGRLDHEHSRVTSAAERAVLAELSAGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ A TL V A DG +++ N A +GR A+ +R +
Sbjct: 236 SGPVGALARIDAQTLRVEAAVCALDGSRQIREAQSAQLLNESHAAALGRRVAESLRSMGA 295
Query: 302 KNVFN 306
+
Sbjct: 296 MELVG 300
>gi|148642941|ref|YP_001273454.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061]
gi|222445181|ref|ZP_03607696.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii
DSM 2375]
gi|261350258|ref|ZP_05975675.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374]
gi|148551958|gb|ABQ87086.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061]
gi|222434746|gb|EEE41911.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii
DSM 2375]
gi|288861043|gb|EFC93341.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374]
Length = 289
Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 102/291 (35%), Positives = 158/291 (54%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LALA + D+ I NI + + TKGD+ITN L + KGLFT+E
Sbjct: 3 VGTRGSQLALAQTNQVC---KDLASITNENIDVNIIKTKGDKITNSQLYNMDAKGLFTKE 59
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++K L+ EID AVHS KD+PT+L + L+I+A R +V IS+ ++ +L +S +
Sbjct: 60 LDKALLEEEIDFAVHSFKDLPTELDEELEIAAVPKRVAPNEVLISN--KNWDELGPNSKL 117
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A + RG IETR++K+N + A L+A AG+ RL + IK
Sbjct: 118 GTSSLRREAFCNYHNKCFELKPIRGNIETRISKVNGSDLDATLMAQAGLIRLNLTQHIKT 177
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++ P+ GQGA+ I T ++ K +E++ +N + V E+ L EL C+
Sbjct: 178 VFPLDYITPAAGQGALAIITRKDSDK-KEIISKLNDYQSRQEVFAEKQVLEELGVGCQWP 236
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
I A K Y I+L +G++ E + G+ DA+ G+ + +
Sbjct: 237 IGAIAQMKDKQFCIYSILLTKEGEVLKEHTEKGSIRDAVQFGKKIGKVFKD 287
>gi|239980250|ref|ZP_04702774.1| porphobilinogen deaminase [Streptomyces albus J1074]
Length = 307
Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 81/305 (26%), Positives = 146/305 (47%), Gaps = 21/305 (6%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A + + ++ + P + ++ ++T GD + L +IGG G+F + + L+ GE
Sbjct: 1 MAQSGQVADAVHQLTGRP---VELVEITTYGDT-SREHLAQIGGTGVFVAALREALVRGE 56
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
+D AVHS KD+PT L ++A PRED RDV I+ ++L + +GT S RR A
Sbjct: 57 VDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFEELPEGARVGTGSPRRMA 116
Query: 137 LLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
L + R + + RG I+TR+ + + + A++LA AG+ R+ + + E L+++
Sbjct: 117 QLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAGLHRVGRSDEVTEYLSVD 176
Query: 193 DFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
P+PGQGA+ IE + ++ ++ T +V ER+ LA L+ C + +
Sbjct: 177 TILPAPGQGALAIECAAGHEADGLPLAAVLAELDDPATRAAVTAERSLLAALEAGCSAPV 236
Query: 249 AGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYIRFI 299
A + G+V + DG ++S G +A +G + A +
Sbjct: 237 GALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTGPVPTTHDEAAALGTELAAEMLAK 296
Query: 300 SNKNV 304
+
Sbjct: 297 GAAGL 301
>gi|167761211|ref|ZP_02433338.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704]
gi|167660877|gb|EDS05007.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704]
Length = 803
Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +G+R S LA+ + + H P + ++ + T GD+ + TL +IGG
Sbjct: 1 MSRK-IVVGSRESRLAIIQTEKVMEHIRRSH--PKIELEMMTMETTGDKRLDVTLDQIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E++K L+ G ID AVHS KDMP K + I Y PRED+RDV + +++
Sbjct: 58 KGLFVKELDKALLDGRIDLAVHSLKDMPMDESKVIPIVRYSPREDVRDVLVLPKG--VEE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+IG SS RR+ R + RG + TRL KL+ + A++LA AG+KRL
Sbjct: 116 WDGRGIIGCSSFRRRIQAKRLFKEAEFRSVRGNVITRLEKLDRGEYDALILAAAGLKRLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + ++ P+ GQG + ++ ++ + ++ ++ ERAF+ L
Sbjct: 176 LEYRISRYFSTDEILPAAGQGTMAVQGRIDMNY--DFLEGYGKKEDAYIAKGERAFVRYL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
DG C S +A + L G+ + + S++G +A IGR+ A
Sbjct: 234 DGGCSSPVAAYGEVIDGQLLMKGLYYMEETGNYAIGSKSGPVEEAEKIGRELA 286
>gi|300779915|ref|ZP_07089771.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC
33030]
gi|300534025|gb|EFK55084.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC
33030]
Length = 295
Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 90/301 (29%), Positives = 136/301 (45%), Gaps = 9/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S LA A R +L+ H+ + ++T GD E G G+F
Sbjct: 4 TLRVATRGSKLATTQAGHIRDALISA----GHSAELTIVTTAGDMSQ--APVERIGVGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T I + L GE D AVHS KD+PT + RED R+ I+ L DL
Sbjct: 58 TTAIRQALFDGEADVAVHSFKDLPTA-HEPRTHLIIPVREDRREALIARDGLKLADLPSG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR A L R D+ + RG IE+R+ ++ + + A++LAYAG+ R+ +
Sbjct: 117 ARVGTSAPRRIAQLRAKRPDLDIHPLRGNIESRMGRVTSGELDAVVLAYAGMSRVGLGER 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ EDF P+P QGA+ +E + +A + + + ER LA L+ C
Sbjct: 177 ATEVFAPEDFMPAPAQGALAVECRAEDAQAVAAIDTLVDDFATRCALTERFVLATLEAGC 236
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A A G + G V A DG +G D +G+ AQ +
Sbjct: 237 TAPVAASAVLDGDEITVRGGVFALDGSAQLVREASGT--DPREVGQACAQQLFDAGAAQF 294
Query: 305 F 305
Sbjct: 295 L 295
>gi|148259148|ref|YP_001233275.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5]
gi|146400829|gb|ABQ29356.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5]
Length = 333
Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 108/312 (34%), Positives = 156/312 (50%), Gaps = 11/312 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMD---VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P R+GTR SPLAL ++L + P +ST GDR+T+R L EIGGK
Sbjct: 20 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 79
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114
GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I +
Sbjct: 80 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 139
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A
Sbjct: 140 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 199
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER
Sbjct: 200 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 259
Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
A LA LDGSC++ I G A L+ G+ DG + S N DA+ +G +
Sbjct: 260 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAVRLGAELG 319
Query: 294 QYIRFISNKNVF 305
+R S ++F
Sbjct: 320 ASLRRDSPADIF 331
>gi|328908097|gb|EGG27856.1| hydroxymethylbilane synthase [Propionibacterium sp. P08]
Length = 334
Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats.
Identities = 94/329 (28%), Positives = 145/329 (44%), Gaps = 32/329 (9%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ + ++T+GD + +L +GG G+F
Sbjct: 4 IRLGTRASTLATTQSEMVAGMLRS----EGLDVDLTTITTRGDT-STTSLAAMGGIGVFA 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L DL +
Sbjct: 59 SAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLNDLPQGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAG 175
+GT S RR A LL R D+++ID RG ++TRL ++ A++LA +G
Sbjct: 119 SVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVVLAASG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232
+ RL V+ E LN P+P QGA+ +E + + + + I+ T +
Sbjct: 179 LARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTRLAATA 238
Query: 233 ERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSR 278
ERA L+ L+ C + I A K L +V A DG
Sbjct: 239 ERAVLSHLEAGCAAPIGALAQLKPAPGKSPEVLTLDVVVTAVDGSRTIREQVSVELPEEV 298
Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307
+ A +G AA+ + +V +
Sbjct: 299 DPALAAAHTLGMTAAEELLDDGAADVADL 327
>gi|326402301|ref|YP_004282382.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301]
gi|325049162|dbj|BAJ79500.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301]
Length = 335
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 108/312 (34%), Positives = 155/312 (49%), Gaps = 11/312 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMD---VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P R+GTR SPLAL ++L + P +ST GDR+T+R L EIGGK
Sbjct: 22 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 81
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114
GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I +
Sbjct: 82 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 141
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A
Sbjct: 142 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 201
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER
Sbjct: 202 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 261
Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
A LA LDGSC++ I G A L+ G+ DG + S N DA +G +
Sbjct: 262 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAARLGAELG 321
Query: 294 QYIRFISNKNVF 305
+R S ++F
Sbjct: 322 ASLRRDSPADIF 333
>gi|302205429|gb|ADL09771.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis C231]
gi|308275667|gb|ADO25566.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis I19]
Length = 296
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 7/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F IGTR S LA + R +L+ ++ + ++T GD N E G G+F
Sbjct: 2 TFTIGTRGSLLATTQSGHVRDALISQ----GYSAELSIVTTPGDV--NMAPVERIGVGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L+ G D AVHS KD+PT+ + R D RD ++ +L +L
Sbjct: 56 TQALRDVLVKGGCDIAVHSFKDLPTQRDPRFHLI-VPERADARDCLVARDGLTLAELPQG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C
Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + L G V++ DG + G +A+ IG A + +
Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVFRATMTGGLSEAVAIGEKVAAKLIQDGAAEL 294
Query: 305 F 305
Sbjct: 295 L 295
>gi|307244624|ref|ZP_07526728.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM
17678]
gi|306492005|gb|EFM64054.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM
17678]
Length = 310
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 99/304 (32%), Positives = 143/304 (47%), Gaps = 12/304 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LALA S ++D K P I + TKGD+I +++L +IG KGLF
Sbjct: 2 KLIVGTRGSALALAQTDSIISLVLD--KFPDLEIEKKIIKTKGDKILDKSLDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122
EIE++L+ G ID AVHS KDMPTK+ GL+++ R+D RDV + + L+
Sbjct: 60 VSEIERELLEGTIDFAVHSLKDMPTKISPGLKLAQTPERQDPRDVLVINPKHQLRPEDIM 119
Query: 123 ------LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
IGT S RR + L R I + RG I TRL KL + AI+LA AGI
Sbjct: 120 DWLRSSQGLKIGTGSKRRTSQLKRINESIQPMMIRGNIGTRLEKLVSQDLDAIVLAAAGI 179
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + + + E+ P+ GQGA+ IE N+ + + + + ER F
Sbjct: 180 NRLGMDGLNLYHFSYEEMIPACGQGALAIEVRSNDENTDRIFDFLADDQACMEIEAERTF 239
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQ 294
L ++G C + G+ G+ D + A +G+D A
Sbjct: 240 LEVINGGCHVPVGATVKKVGNKWVLMGMYGREDCSSIVYGQLDFEPSLGGAKKVGQDLAS 299
Query: 295 YIRF 298
Y+
Sbjct: 300 YLIK 303
>gi|302523839|ref|ZP_07276181.1| porphobilinogen deaminase [Streptomyces sp. AA4]
gi|302432734|gb|EFL04550.1| porphobilinogen deaminase [Streptomyces sp. AA4]
Length = 315
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 90/306 (29%), Positives = 148/306 (48%), Gaps = 19/306 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIGTR S LALA ++ + I+ ++T GD +++ +++IG G
Sbjct: 2 TRVIRIGTRGSKLALAQTGIVADTIRATGA----EVEIVTVTTPGD-LSSAPISQIG-VG 55
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT + + L+ EID AVHS KD+PT GL ++A PRED RD I+ +L +L
Sbjct: 56 VFTSALREALLRNEIDVAVHSYKDLPTAPEAGLVLAAVPPREDPRDALIARDGLTLGELP 115
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ +
Sbjct: 116 PGAKVGTGAARRMAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGRV 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELD 241
I E L+ P+P QGA+ +E + + L+ ++ E T +V ERA LA L+
Sbjct: 176 DEITETLDPIQMLPAPAQGALALECRAADVDIEHLLASAVDDETTRVAVTAERALLAALE 235
Query: 242 GSCKSAIAGFAYCKGS---------TLYFYG--IVLASDGKI-FHEVSRNGNRCDAINIG 289
C + + A + G V +G + S +A +G
Sbjct: 236 AGCSAPVGALAEIVEDLDDEGAVVERISLRGTAAVEGENGGVDMVRASAIAGIGEAEKLG 295
Query: 290 RDAAQY 295
R+ A
Sbjct: 296 RELAAE 301
>gi|290955334|ref|YP_003486516.1| porphobilinogen deaminase [Streptomyces scabiei 87.22]
gi|260644860|emb|CBG67946.1| porphobilinogen deaminase [Streptomyces scabiei 87.22]
Length = 296
Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats.
Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT+E++ L++
Sbjct: 1 MALAQVERVRAELAVLH--PALRTEVVPVKTTGDKWMGD-LSQVEGKGAFTKEVDAALVA 57
Query: 75 GEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132
GE D AVH KD+P L G +A+L R+DIRD + ++L +L + IGTSS+
Sbjct: 58 GEADLAVHCVKDIPADRPLPAGTMFAAFLKRDDIRDALVDPAGRTLDELPAGTRIGTSSV 117
Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
RR A L + + FRG RL KL +A A+LLA +G++R+ + VI E L++E
Sbjct: 118 RRTAQLAASHPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRADVISEFLSVE 177
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P G G + ++ + + V + DT ER FL L G C S IAGFA
Sbjct: 178 TMMPPIGAGVLALQCREGDALTIDTVSGLGDPDTHRETLAERMFLHVLQGHCNSPIAGFA 237
Query: 253 YCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G L V DGK R D +G A + +++ +
Sbjct: 238 RTDRGGELSLRASVFTPDGKTVLNAHEWAGRLDPATLGTSVAVALLRQGARDLID 292
>gi|218509456|ref|ZP_03507334.1| porphobilinogen deaminase [Rhizobium etli Brasil 5]
Length = 279
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 132/226 (58%), Positives = 164/226 (72%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 54 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 113
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D
Sbjct: 114 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 173
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 174 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 233
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T
Sbjct: 234 KVEVLTDILDPDTFPPAPAQGAICIESRIGDTRIDDLLAAVNDAAT 279
>gi|212695966|ref|ZP_03304094.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM
7454]
gi|212677089|gb|EEB36696.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM
7454]
Length = 318
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 94/299 (31%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG+R S LAL A + L I+ +STKGDRI +R + ++ KG+F
Sbjct: 2 IKIGSRASKLALIQANMVKDILEK----EGLEAQIVEISTKGDRIRDRKIDQLNSKGVFV 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D ++
Sbjct: 58 REIEEKLLDKTIDIAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDVFKKMDDLNNA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR S+I RG +ETR+ K+ + ++LA +G+ R + I
Sbjct: 118 LVGTGSNRRVCQGKNHFSNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ F PSP QG + IE + K E+ K + E T + ERAF EL C
Sbjct: 178 NFDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCS 237
Query: 246 SAIAGFAYCKGSTLYFYG-IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ + F + G + D +I +E +GN + I++ + A+ ++ S K
Sbjct: 238 TPMGIFTEIDHDKITLTGSMAFDKDDRINYE-RVSGNISERIHLAQKLARTLKKKSYKK 295
>gi|295837224|ref|ZP_06824157.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197699853|gb|EDY46786.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 328
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP R+GTR S LA+A + ++ + P + ++ ++T GD + L IGG
Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VALVEITTYGDT-SREHLARIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ G++D AVHS KD+PT + L ++A RED RD I+ +L+
Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEELVLAAIPRREDPRDALIARDGLALEQ 116
Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L I + RG ++TR+N + + + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRTAQLNAHARAHGLGIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + + + L + P+PGQGA+ +E E + ++ T +V ERA
Sbjct: 177 HRLGRGAEVTQYLAPDTVLPAPGQGALAVECPPG--PLAEALARLDDPYTRAAVAAERAL 234
Query: 237 LAELDGSCKSAIAGFAYCKGST----------------LYFYGIVLASDGKIFHEVSRNG 280
LA L+ C + + A T + G+V ++DG +++ G
Sbjct: 235 LATLEAGCSAPVGALADFPDGTQDQAARPNEPARQTTEMRLRGVVGSTDGSALVQLTTTG 294
Query: 281 NR 282
+
Sbjct: 295 HV 296
>gi|300857688|ref|YP_003782671.1| porphobilinogen deaminase [Corynebacterium pseudotuberculosis
FRC41]
gi|300685142|gb|ADK28064.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis
FRC41]
gi|302329983|gb|ADL20177.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis 1002]
Length = 296
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 7/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F IGTR S LA + R +L+ ++ + ++T GD N E G G+F
Sbjct: 2 TFTIGTRGSLLATTQSGHVRDALISQ----GYSAELSIVTTPGDV--NMAPVERIGVGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L+ G D AVHS KD+PT+ + R D RD ++ +L +L
Sbjct: 56 TQALRDVLVKGGCDIAVHSFKDLPTQRDPRFHLI-VPERADARDCLVARDGLTLAELPQG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C
Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + L G V++ DG + G +A+ IG A + +
Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVLRATMTGGLSEAVAIGEKVAAKLIQDGAAEL 294
Query: 305 F 305
Sbjct: 295 L 295
>gi|51244454|ref|YP_064338.1| porphobilinogen deaminase [Desulfotalea psychrophila LSv54]
gi|50875491|emb|CAG35331.1| probable porphobilinogen deaminase [Desulfotalea psychrophila
LSv54]
Length = 313
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 7/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IG+R S LA+ L I + TKGD+I +R++ +IG KG
Sbjct: 2 KNIINIGSRKSKLAMWQTNTIAGQLEAA----GMETRINSMETKGDKILDRSIVKIGSKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDL 121
+FTEE+E +L +G D AVHSAKDM ++L + ++ A+ RE + DV +S + L D
Sbjct: 58 VFTEELEVQLATGITDIAVHSAKDMQSQLPEDFELIAFSQREKVNDVLVSDDKEIDLADP 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
IGTSS+RR+A+L ++ + ++ RG ++TR+ K+ N A++LAYAG+KR++
Sbjct: 118 TKKIRIGTSSVRRRAMLKQYYPHVQAVEMRGNLQTRIEKMRNGDCDALMLAYAGVKRMEN 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVK-VINHEDTWDSVNCERAFLAE 239
+ +I + F P GQG I IE N +P +E ++ +N D+ + ERA+L +
Sbjct: 178 DDMIVMEFDTARFTPPVGQGCIAIEAATNLDPARREAIRTALNDADSESCLLAERAYLKK 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C G A +G L + + DG NR +A +G + +YI
Sbjct: 238 LEGGCSIPAFGLACLEGEELVMRAGLSSLDGTRILVKEVRANRSEAETLGNNLGEYILEN 297
Query: 300 SNKNVF 305
+ +
Sbjct: 298 GGREML 303
>gi|312200104|ref|YP_004020165.1| porphobilinogen deaminase [Frankia sp. EuI1c]
gi|311231440|gb|ADP84295.1| porphobilinogen deaminase [Frankia sp. EuI1c]
Length = 380
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 46/338 (13%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LALA + L + ++ + T+GDR ++++G G++
Sbjct: 40 LRLGTRRSALALAQSGMVADELRTRL---GIEVDLVHVVTEGDRNRAE-ISQLGSTGVWV 95
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L+SGE+D AVHS KD+PT +G+ ++A PRED+RDV +S T ++L L +
Sbjct: 96 SALREALLSGEVDLAVHSLKDLPTAPPEGITLAAIPPREDVRDVLVSPTGRTLAQLGPGA 155
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT + RR A L + V+ RG ++TR+ K + + A++LA AG+ RL + I
Sbjct: 156 RIGTGAPRRAAQLRALGLGLDVVPIRGNVDTRIKKAIDGEVDAVVLARAGLARLDRLDAI 215
Query: 186 KEILNIEDFPPSPGQGAICIET-----------HVNNPK--------------------- 213
E+L E P+PGQGA+ IE V P+
Sbjct: 216 TELLEPEVMLPAPGQGALAIECVATTLAPLTLLTVGTPEDQGAVTGMSCPVAPGSGVEIP 275
Query: 214 AQELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC---------KGSTLYFYG 263
+ L++ V++ + +V ERAFLA ++ C + + A +
Sbjct: 276 LERLLRFVLDDAPSSVAVRAERAFLAAIEAGCTAPVGALAQVLPARGQAPASEGEVRLRA 335
Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+V + DG G+ D +GR A +
Sbjct: 336 VVASLDGTTVLRRELGGSTADPEALGRRLADDLLSAGA 373
>gi|307595857|ref|YP_003902174.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429]
gi|307551058|gb|ADN51123.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429]
Length = 304
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 92/300 (30%), Positives = 148/300 (49%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S L+L + + V P +I + T GD I ++ L IG KG+F
Sbjct: 3 IRIATRGSRLSLIQTEIVMNMIRRVE--PNVRFDVIIVRTTGDVIQDKPLYAIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--LKDLAL 123
+E+ L+ E D AVHS KD+P+++ GL ++ + PR+ DV + L L
Sbjct: 61 KEVNLALLRNEADIAVHSLKDLPSEISPGLVVAGFSPRDPPFDVLVVKDDYPSELMALPS 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---- 179
+ +GTSS+RR+A LL R DIS+ RG ++TR+NKL AI++A AG+ RL
Sbjct: 121 GARVGTSSVRRRAFLLNVRRDISINVIRGNVDTRINKLIRGDYDAIVIAEAGLVRLINDV 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K + ++ + PP+PGQG I + + +L+ + ERAFL
Sbjct: 181 KSLNIKYTRISPDVLPPAPGQGIIAVVAREKDTDLVDLLNKASDPKARAEALAERAFLRT 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ G C + G A +G+ + F + +G+ V +G+ + +G +AA+ +
Sbjct: 241 IGGGCHVPVGGMAIHEGARMEFIAGMADLNGERKVLVKLSGSPSNPEELGVNAARELLKR 300
>gi|256088596|ref|XP_002580415.1| hydroxymethylbilane synthase; porphobilinogen deaminase
[Schistosoma mansoni]
gi|238665988|emb|CAZ36654.1| hydroxymethylbilane synthase [Schistosoma mansoni]
Length = 411
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 90/300 (30%), Positives = 144/300 (48%), Gaps = 27/300 (9%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+G+R S LAL + L + P ++ ++T GD+I + +L++IG K
Sbjct: 7 RNVVRVGSRRSNLALLQTGMAVNLLQK--QNPHILFEVVEMATVGDKILDVSLSKIGDKS 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLK 119
LFT+E+E L+SGE+D VHS KD+P+ L GL + R DV + + + L
Sbjct: 65 LFTKELENALLSGEVDLVVHSLKDVPSTLPSGLVLGCVFARVSPEDVVLMAPHYRGRKLS 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-------------- 165
DL + S +GTS++RR A L R + + RG + TRL KL+
Sbjct: 125 DLPIGSTVGTSAVRRVATLTRKYPHLKFVSIRGNLNTRLAKLDTPPASKDNCCSGNPSPS 184
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
AI+LA AG++R+ I ++L D + QGA+ E + + +L+ I+ E
Sbjct: 185 YDAIILAKAGVERMGWSHRIDQVLT--DSFYAVSQGALACECRLVDNFIMDLLSHIHDES 242
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFA--YCKGS----TLYFYGIVLASDGKIFHEVSRN 279
+ ER+ + +LDG C I + KG L + +L+ DG E S +
Sbjct: 243 AALTTIAERSLMRQLDGGCSIPIGVRSDLVLKGDLNYYQLTLHANILSVDGGKSIERSAS 302
>gi|302875078|ref|YP_003843711.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
gi|307690298|ref|ZP_07632744.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
gi|302577935|gb|ADL51947.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
Length = 300
Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 104/301 (34%), Positives = 159/301 (52%), Gaps = 10/301 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK RIGTR S LAL ++ H P N ++ +STKGD I +++L GGKG
Sbjct: 2 KKIIRIGTRKSKLALMQTNIVIDAIKKKH--PEINCEVVEMSTKGDEILDKSLLSFGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDL 121
F E EK + SGEID AVHSAKDMP LL GL+I A RED RDV + ++ ++ D
Sbjct: 60 AFVSEFEKAIKSGEIDLAVHSAKDMPMDLLTGLKIVAVTKREDPRDVLVTANNKDTINDF 119
Query: 122 AL-HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +IGT+SLRRK + R +++ D RG ++ RL KL + + I+LA AG+KRL
Sbjct: 120 NKTNKLIGTTSLRRKLQIKRLLNNVDTKDLRGNVQRRLEKLISGEYDGIILAAAGLKRLG 179
Query: 181 KEKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ L++EDF P+ GQG I +E + L I++E+ S+ ER +
Sbjct: 180 LLDDERINLNYLSVEDFIPAGGQGIIAVEGRAE-EEFSFLKDSIHNEEAMYSLEVERYVM 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+L+ C I +++ T++ I+ +GK+ + + + + + + I
Sbjct: 239 KKLNAGCNEPIGAYSFIDKDTIFLD-IIYEHNGKVS-RKKGSDSIENRLKLTEKLVEEIL 296
Query: 298 F 298
Sbjct: 297 Q 297
>gi|169631071|ref|YP_001704720.1| porphobilinogen deaminase [Mycobacterium abscessus ATCC 19977]
gi|238054424|sp|B1MHI5|HEM3_MYCA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169243038|emb|CAM64066.1| Porphobilinogen deaminase (HemC) [Mycobacterium abscessus]
Length = 306
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 92/310 (29%), Positives = 138/310 (44%), Gaps = 15/310 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L H ++ ++T GD + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGIRDALRAK----GHEAELVIVTTAGD--QSAAPVEQIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +D AVHS KD+PT I A PRED RD ++ L +L S
Sbjct: 56 AALREAIADDVVDVAVHSYKDLPTAADPRFVIPAIPPREDYRDALVARDGLVLGELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRL++++N +++A AG+ R+ + I
Sbjct: 116 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLSRVSNGDLDGVVVARAGLARIGRLDHI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E ++ ++H DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQVLPAPAQGALAVECRSEATDLVAVLAELDHADTRAAVTAERALLAELEAGCT 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G A DG S G A +G A+ +
Sbjct: 236 APVGAIAEVVESIDEEGRVFDELSLRGCAAALDGSDVIRASGIGTPDRAAELGLAVAREL 295
Query: 297 RFISNKNVFN 306
+ + +
Sbjct: 296 LDLGARALIG 305
>gi|15668749|ref|NP_247548.1| porphobilinogen deaminase [Methanocaldococcus jannaschii DSM 2661]
gi|2495178|sp|Q57989|HEM3_METJA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|1591276|gb|AAB98563.1| porphobilinogen deaminase (hemC) [Methanocaldococcus jannaschii DSM
2661]
Length = 292
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 89/297 (29%), Positives = 140/297 (47%), Gaps = 12/297 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ + + I + T GDR+ ++ L++IG G+FT
Sbjct: 2 IRIGTRGSKLALYQANKVAELLKNL----GYKVEIKIIKTTGDRVLDKKLSDIG-IGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + +
Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYHDLLIWNKDIDFNE-DSKI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR+A L + RG ++TRL KL AI+L+ AGI RL
Sbjct: 116 VIGTSSMRRRAFLKFIYPNAKFELLRGNVDTRLRKLKEGLYDAIVLSEAGIIRLGVSLED 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ P+P QG I + ++ + + ++K INHE T+ CER L E G C
Sbjct: 176 FNYKRLDI-LPAPAQGIIAVACKRDDEEMKSILKEINHERTYLESLCERTALNEFGGGCS 234
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297
A L V+ +D + A+ +G+ ++
Sbjct: 235 VPFGALAVYDEKNELLKLKAAVVTNDELKNASGEVKCKIDEIDKAVELGKKIGLKLK 291
>gi|91773206|ref|YP_565898.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242]
gi|121684353|sp|Q12WM8|HEM3_METBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|91712221|gb|ABE52148.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242]
Length = 309
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 98/303 (32%), Positives = 153/303 (50%), Gaps = 8/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA+A A L + N+ + T GD T+R L E+ G G+F
Sbjct: 1 MILGTRGSALAIAQADLVTKMLEEKGHELTRNV----IKTSGDVFTDRPLHEVAGVGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ ++I GE+D AVHS KD+PT L I+A L R+ DV ++ +L +L +
Sbjct: 57 RELDDRMIEGEVDIAVHSMKDLPTVRPPELAIAAVLKRDSPYDVLLTADGSTLDELPDGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGT+S+RR+A LLR+R D++V D RG I TR+ KL + ILLA AG++R+ +
Sbjct: 117 IIGTTSMRRRAQLLRYRPDLNVEDLRGNINTRIQKLKAGQYDGILLAEAGLQRMGW-DMD 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E F PS QG I + T ++ +A+ V+NHE + ER + +++G C
Sbjct: 176 VQRLPAEAFCPSANQGTIVVVTRADD-EAERACSVLNHERSRMETEVERLLITDVEGGCI 234
Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
I FA G ++ VLA DG + + + + + + K
Sbjct: 235 VPIGSFAQMNEDGDEIHVLVEVLAVDGTREIRIEDDIPVKNYREHALSIGRMLVEMGGKE 294
Query: 304 VFN 306
+
Sbjct: 295 LVQ 297
>gi|73668987|ref|YP_305002.1| porphobilinogen deaminase [Methanosarcina barkeri str. Fusaro]
gi|121731279|sp|Q46CH0|HEM3_METBF RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|72396149|gb|AAZ70422.1| hydroxymethylbilane synthase [Methanosarcina barkeri str. Fusaro]
Length = 316
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 152/304 (50%), Gaps = 9/304 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-GKGLF 64
IGTR S LALA A L + + T GDR T+R L + G G F
Sbjct: 1 MIIGTRGSQLALAQAETVARLLKAK----GVETSLKIIKTSGDRFTDRPLHAVSSGVGAF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E+++ ++ G+ID AVHS KDMPT L A L R+ D+ +++ L +L+
Sbjct: 57 VRELDEVMLEGKIDIAVHSMKDMPTIRPPTLPTVAVLKRDTPFDLLLTYDGTPLDELSEQ 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S+IGTSSLRR A + R+R D+ D RG I+TRL KL K ILLA AG++R+ E +
Sbjct: 117 SIIGTSSLRRAAQIKRYRPDLVTQDLRGNIDTRLRKLKEGKYDGILLAKAGLERMGWE-L 175
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
EIL+ + F PSP QG I + T +A+ V ++H D+ + ER ++EL G C
Sbjct: 176 EGEILSPDFFCPSPNQGTIAVVTRAE-TEAEAAVSRLDHTDSRIATEIERILISELGGGC 234
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+ I +A L+ VL+ DG+ ++ I R+ + + K
Sbjct: 235 TTPIGSYAEIMPDRKKLHVRAEVLSLDGEETVGINEFIPMAGGIEKARELGSSLVHMGGK 294
Query: 303 NVFN 306
+ +
Sbjct: 295 KLAD 298
>gi|297563292|ref|YP_003682266.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847740|gb|ADH69760.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 335
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 13/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S +A + + ++ I + +++ GD +T LT++GG G+F
Sbjct: 20 PARLGTRRSTMATSQSRMVADAITART---GRVIELELITSFGD-VTKAHLTQLGGTGVF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ +L +G +D AVHS KD+PT +GL ++A R+D RD + DL
Sbjct: 76 VNALRDELHAGTVDFAVHSLKDLPTTPAEGLVLAAIPERDDPRDALCARDGLKFADLPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ + +
Sbjct: 136 ARIGTGSPRRVAQLAALRPDLVYVPIRGNAETRLGKVASGELDAVVLAYAGLGRVGRTED 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E+ E P+PGQGA+ +E V + ++H T V ER L+EL+
Sbjct: 196 VTEVFEPEQMLPAPGQGALAVECSVERLDGDLAYLASVDHPATRAEVVAERTVLSELEAG 255
Query: 244 CKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN------GNRCDAINIGRDAAQY 295
C + + +A T L V+A+DG R G+ A +GRD A+
Sbjct: 256 CAAPVGAYAQYDAETGRLRLRAAVVATDGAEAVRRERAADLASPGDLAAATALGRDLARQ 315
Query: 296 IRFISNKNVF 305
+ +
Sbjct: 316 MIAEGADRIV 325
>gi|89889812|ref|ZP_01201323.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7]
gi|89518085|gb|EAS20741.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7]
Length = 317
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 157/313 (50%), Gaps = 19/313 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LA+ A +S L + + P+ ++GD + L E+G
Sbjct: 1 MSLK-IRIGTRDSQLAMWQATTVQSQLNAL----GFQTELAPVKSQGDLNLDEPLYEMGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ L+ G+ID AVHS KD+PT+L KG+ +A L R +D+ + +S +
Sbjct: 56 TGIFTKTLDVALVKGDIDIAVHSLKDVPTQLPKGMVQAAVLERASQKDILV---YKSSFN 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179
I T SLRRKA L + V+D RG + TRL+KL+ N +A + A AG+ R+
Sbjct: 113 PDEAMTIATGSLRRKAQWLNMYAQHHVVDLRGNVNTRLSKLHSNKDWNAAIFAKAGLDRI 172
Query: 180 KKEKVIK-----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
++ E +++ F P+P QGAI I +N E V +NH T V+ ER
Sbjct: 173 GLLSQLRGNYGFEYSDLDSFVPAPAQGAIMIAAMGHNTAVLEAVSQLNHAQTQRCVDIER 232
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA-INIGRDAA 293
FL EL+G C + I A + + F G +L+ DG +V N + +++G A
Sbjct: 233 RFLRELEGGCTAPIGAIAQVHDNKIDFTGCLLSIDGTERIDVKDQINLTETDVDLGLAFA 292
Query: 294 ----QYIRFISNK 302
+ + K
Sbjct: 293 KAQSEKVFAKGGK 305
>gi|301630715|ref|XP_002944462.1| PREDICTED: porphobilinogen deaminase-like, partial [Xenopus
(Silurana) tropicalis]
Length = 291
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 88/281 (31%), Positives = 122/281 (43%), Gaps = 33/281 (11%)
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--- 114
IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 1 IGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRY 60
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAY 173
+L L SVIGTSSLRR A L + + D RG + TR+ KL+ + AI+LA
Sbjct: 61 GNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAA 120
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG++R+ E I +IL ++ + GQGA+ IE + +V + +T E
Sbjct: 121 AGLRRMGWENRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAE 180
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNR 282
RAF+ L+G C +A K S LY G V + DG + G
Sbjct: 181 RAFMKRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPN 240
Query: 283 CD------------------AINIGRDAAQYIRFISNKNVF 305
D A +G A + K +
Sbjct: 241 DDVQHVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 281
>gi|11498841|ref|NP_070070.1| porphobilinogen deaminase [Archaeoglobus fulgidus DSM 4304]
gi|6225498|sp|O29026|HEM3_ARCFU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|2649337|gb|AAB90000.1| porphobilinogen deaminase (hemC) [Archaeoglobus fulgidus DSM 4304]
Length = 289
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 95/297 (31%), Positives = 146/297 (49%), Gaps = 17/297 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LALA + L + + + I + T GD + ++ L E G G F
Sbjct: 2 KLIVGTRGSKLALAQTNKVAERLKERY-----EVEIRIVKTAGDIMKDKPLYEFKGMGAF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++ L G++D AVHS KD+P++ ++G ++A + R+ DV IS +L++L
Sbjct: 57 VRALDTALAEGKVDVAVHSFKDVPSQRVEGTVVAAVIERDSPCDVLISRDGSTLEELDEG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+V+GTSSLRR+A L R R D+ + RG ++TRL KL AI++A AG+KRL + +
Sbjct: 117 AVVGTSSLRRRAQLSRLRGDLRFENLRGNLDTRLRKLREGNYDAIVVAEAGLKRLGLDRE 176
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + E P QG I I T LV +N E TW ERA + EL
Sbjct: 177 VEYQPFPPEVIVPPANQGIIAIATRKGEED---LVAFLNDEKTWLEAMVERAVIKELGVG 233
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYI 296
C + +A + S + +L K + V ++ +A IG+D + I
Sbjct: 234 CAVPVGVYAEAQ-SRVRLICEILD---KKYLRVEEKLSKDTAVEEAAEIGKDLRKEI 286
>gi|312888384|ref|ZP_07747960.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603]
gi|311299218|gb|EFQ76311.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603]
Length = 526
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 89/266 (33%), Positives = 139/266 (52%), Gaps = 16/266 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IGTR S LAL A ++ L + + + T+GDRI N + ++ G
Sbjct: 1 MFDRKLIIGTRGSELALWQANFVKNKLAEN----GIQADLKIIKTQGDRILNLSFDKLEG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-------DVFISH 113
KG FT+E+E++L++G ID AVHS KD+PT+ GL I+A RED D H
Sbjct: 57 KGFFTKELEEELLAGTIDLAVHSHKDLPTENPPGLTIAAVSEREDPAELLLVLKDCVDVH 116
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
S+K ++GTSS RRKA LL R D+ + + RG + TR+NKL N AI++A
Sbjct: 117 QKLSVK---YGGIVGTSSNRRKAQLLAVRPDLEIDELRGNVPTRINKLRNEDYDAIMIAK 173
Query: 174 AGIKRLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
AG+ RL + + E + + P+P QG + I+ + + E ++++NH D + +
Sbjct: 174 AGVVRLGLDMSEFHVEEIPPTELIPAPAQGVLAIQVREADTELFEALQILNHPDVAEELA 233
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS 257
ER+ L G C + + + +
Sbjct: 234 VERSLLKLFGGGCHLPLGCYCRKRDN 259
>gi|15828303|ref|NP_302566.1| porphobilinogen deaminase [Mycobacterium leprae TN]
gi|221230780|ref|YP_002504196.1| porphobilinogen deaminase [Mycobacterium leprae Br4923]
gi|13093996|emb|CAC31937.1| porphobilinogen deaminase [Mycobacterium leprae]
gi|219933887|emb|CAR72519.1| porphobilinogen deaminase [Mycobacterium leprae Br4923]
Length = 318
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT
Sbjct: 5 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + G +D AVHS KD+PT ++A PR D RD ++ L +L S
Sbjct: 59 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 179 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 238
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S A +G A +
Sbjct: 239 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 298
Query: 297 RFISNKNV 304
+ + +
Sbjct: 299 FELGAREL 306
>gi|326428753|gb|EGD74323.1| uroporphyrinogen decarboxylase [Salpingoeca sp. ATCC 50818]
Length = 737
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/337 (29%), Positives = 155/337 (45%), Gaps = 36/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ + IGTR S LAL A L V K P H I + T GD+ L + G G
Sbjct: 374 QRVYTIGTRGSVLALWQAHYVLDRL--VKKYPTHRFRIKVVDTAGDKDLTTALDKFGTTG 431
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-----AQS 117
+FT+ +E+ L+SGE+DC VHS KD+P+ L +++A R D RD + + S
Sbjct: 432 VFTDALERALVSGEVDCVVHSLKDVPSTLHPSTRLAAISERHDPRDCVVFNPRHNGRYSS 491
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175
+ DL SV+GTSS RR+A L R ++ RG ++TRL KL++ N A++LA AG
Sbjct: 492 IADLPPGSVLGTSSARRRAFLARAYPSLTFKHVRGNVKTRLRKLDDPANGYDALVLASAG 551
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---------------------- 213
++RL E + E L+++ P + GQ A+ ++ +
Sbjct: 552 LERLNMEARVGEKLSVDVVPHAVGQAALGVQVRCSAKPGPHGGEGGDDDDDDGDKDAAVL 611
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGK 271
A+ L + +T + ER FL L G C IA + T + G V + DGK
Sbjct: 612 AEMLHASVQCNETALVCSAERGFLRSLGGGCSLPIAVRSQRDADTGRIVLCGNVCSVDGK 671
Query: 272 IFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVF 305
+ + +A +G A ++ + +
Sbjct: 672 TLASRTCDAVVTTEAEAAALGEKVAADLKADGGEAIL 708
>gi|13627125|sp|Q49808|HEM3_MYCLE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 315
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + G +D AVHS KD+PT ++A PR D RD ++ L +L S
Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S A +G A +
Sbjct: 236 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|32474491|ref|NP_867485.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1]
gi|39931387|sp|Q7UPN0|HEM3_RHOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|32445029|emb|CAD75031.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1]
Length = 337
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 149/324 (45%), Gaps = 29/324 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ A L I+PL +KGD R + GLFT
Sbjct: 12 LRIATRESPLAMWQAEHVAKLLKKH----GFQTEIVPLVSKGDTDM-RPIDGTRQVGLFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-------- 117
+ I++ L+ E D AVHS KD+PT+ ++A PRE + D +
Sbjct: 67 KRIQQALVDDEADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLESQTGA 126
Query: 118 ---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
L L + +GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+A
Sbjct: 127 ESPLDYLPQGARVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHA 186
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
GI RL+ + + +++ P+PGQGA+ IE ++ A + + +N + ER
Sbjct: 187 GILRLEMTDLPHRLFPLDEMIPAPGQGALGIEVRSDDAGAMDAIANLNDAAARLAATAER 246
Query: 235 AFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGN--------- 281
L+EL G C + IA A + G+ L IV+++DG+ +
Sbjct: 247 KVLSELHGGCLAPIACHAKLETSNHGTELCLRAIVMSADGEQRLQEDARITVQPNDADLH 306
Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305
+A +G A+ +R +
Sbjct: 307 VAEAHELGTLVAKRLRDKGADKLI 330
>gi|288932129|ref|YP_003436189.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642]
gi|288894377|gb|ADC65914.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642]
Length = 292
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 10/299 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ IG+R S LALA A + + L + + + + T GD + ++ L E G
Sbjct: 1 MSERVV-IGSRGSKLALAQAEKVKKLLEER----DFEVEVKVIKTHGDIMKDKPLHEFKG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F I++ L GEID AVHS KD+P++ ++G I+A L RE D FIS ++
Sbjct: 56 MGAFVRAIDEALKRGEIDLAVHSYKDVPSQRVEGTVIAAVLERESACDAFISREGLKFEE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ + S IGTSSLRR+A + + R D+ V + RG ++TRL KL I++A AG+ RL
Sbjct: 116 MPVASKIGTSSLRRRAFVKKLRKDLEVENLRGNLDTRLRKLREGFYDGIIVAEAGLIRLG 175
Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ E LN E F PS QG I + + N + L +NHE T + ERA L E
Sbjct: 176 LDKEIEYERLNPEVFVPSANQGVIAVASRENEAE---LFSFLNHEKTRLETDVERAVLRE 232
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L C +A +G + +L+ +G+ V ++ +A+ + A+ ++
Sbjct: 233 LGIGCAIPAGIYAKAEG-KVRLIVEILSEEGEKSVRVDEKLSKENAVEEAVEIAKNLKS 290
>gi|302325361|gb|ADL24562.1| hydroxymethylbilane synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 351
Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 95/352 (26%), Positives = 152/352 (43%), Gaps = 55/352 (15%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------HNIVIIPLSTKGDR 49
M RI TR S LALA +++ + + ++ ++T+GDR
Sbjct: 1 MSDLKLRIATRKSALALAQTTMVADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD
Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120
Query: 110 FISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
F+S DL + +GT S+RR L R D+ + RG I+TR+ KL +
Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKLA--EL 178
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NPKAQE 216
++LA AG+KR+ + E + E P+ GQG + IET + +
Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIETLNDATVQESRVTGRADLAQ 238
Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY--CKGS----------------- 257
++ +N T+ + E A+L L+ C+ +A FA C+
Sbjct: 239 ILARVNDVATYCIASAEMAYLKALNAGCQFPVASFAEFVCEDGIENRGTCGALEENANRI 298
Query: 258 --TLYFYGIVLASDGKIFHEVSRNGNRC--------DAINIGRDAAQYIRFI 299
TL GI + GN + N+G + A I+
Sbjct: 299 AQTLKIRGIYWDEKSEKLLRAEVAGNVDLNSEDCVQQSKNLGIELACAIQKQ 350
>gi|300782413|ref|YP_003762704.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32]
gi|299791927|gb|ADJ42302.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32]
Length = 309
Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 21/307 (6%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LAL +L + I+ ++T GD+ + IG G+FT +
Sbjct: 2 GTRGSKLALTQTGTVADALRAT----GVEVEIVKVTTPGDKSL-APIATIG-VGVFTSAL 55
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+ E+D VHS KD+PT G+ ++A PRED RD I+ +L +L S +G
Sbjct: 56 REALLRNEVDVIVHSYKDLPTAPEPGITLAAVPPREDPRDALIARDGLTLGELPPGSTVG 115
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
T + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + I E
Sbjct: 116 TGAARRTAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGLVEAITET 175
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELDGSCKSA 247
L+ P+P QGA+ +E + + L++ ++ E T +V ERA LA L+ C +
Sbjct: 176 LDPIQMLPAPAQGALAVECRSADVDLEHLLRSTLDDEGTRAAVTAERALLAALEAGCSAP 235
Query: 248 IAGFAYCKGS---------TLYFYGIVLASDGKI----FHEVSRNGNRCDAINIGRDAAQ 294
+ A + G A +G+ ++ A +G+D A
Sbjct: 236 VGALAEIVEDLDAEGKVVERISLRGT-AAIEGEEGAVDMVRAIALADKDQAAQLGKDLAA 294
Query: 295 YIRFISN 301
+ +
Sbjct: 295 ELLDLGA 301
>gi|297180020|gb|ADI16245.1| porphobilinogen deaminase [uncultured bacterium HF0010_16H03]
Length = 301
Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats.
Identities = 93/302 (30%), Positives = 153/302 (50%), Gaps = 5/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL A + + + + + +IP+S++GD +T++ L ++GGKGLF
Sbjct: 2 KIRIATRKSPLALFQAEYVANQIKQLDQ--KIKVELIPMSSEGD-LTDKPLHQVGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ +E L++ D AVHS KD+P L K +I + R D+ ++ S K +
Sbjct: 59 IKTLESALLNDSADIAVHSLKDVPANLEKNFKIISVCKRAAASDILLTKKGTSFKSMPEG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S+IGTSS RRKA + R D+S I RG I TR+NKL+ N +++A A ++RL
Sbjct: 119 SIIGTSSPRRKAQIKILRPDLSTISVRGNIATRINKLHKNHFDGLIIAKAAMERLNLPFK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ ++ P+ QG I IE +N +++ IN E ER+F+A+L+GSC
Sbjct: 179 NTYEFSYQEMLPAATQGFIGIECIASNKDLIKMLGSINSEKDMILAEAERSFVAQLNGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
S IA + + + + L+ +G K + + + +I + A+
Sbjct: 239 LSPIAIYCREESNQILISAKALSQNGDKQIFKEIISSHASINEDI-KSLAKEFISKGADK 297
Query: 304 VF 305
+
Sbjct: 298 LI 299
>gi|212529280|ref|XP_002144797.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC
18224]
gi|210074195|gb|EEA28282.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC
18224]
Length = 336
Score = 278 bits (713), Expect = 6e-73, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 148/320 (46%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F+IGTR S LALA +L K P ++ I T GDR ++ K
Sbjct: 10 ERKCFKIGTRKSKLALAQTDLVVEALKK--KYPQYDFNIETKDTAGDRDKITAFKDMTSK 67
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+TEE+E+ LI G+ID VHS KD+PT L + LPRED RDV I SL
Sbjct: 68 NLWTEELEELLIGGQIDFIVHSLKDVPTILPPTCALGGVLPREDPRDVLIVKPGLPYTSL 127
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L + V RG IETRL KL+ + I+LA AG+
Sbjct: 128 SELPAGSVVGTSSIRRTAQLAMKFPHLKVQSVRGNIETRLAKLDAEDGPFTCIILAAAGL 187
Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R I + L+ + + GQGAI IE ++ +++ + + T+ V ER
Sbjct: 188 LRTGMGGRITQYLDSKSGSLLYAVGQGAIGIEIRSDDALVLDMLNNVGDQKTFKEVLTER 247
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
+ L ++G C + + + L+ I+++ DG + A
Sbjct: 248 SLLRSIEGGCSAPLGVESEWVEDADGTTKLHVRSIIVSVDGTRHSTAELEKVIESPVAAE 307
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G + AQ + +
Sbjct: 308 TFGLELAQELVTNGAGPILE 327
>gi|295094641|emb|CBK83732.1| porphobilinogen deaminase [Coprococcus sp. ART55/1]
Length = 350
Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 28/311 (9%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK
Sbjct: 38 QKKTVKVGTRSSKLALAQTELVIKALNE--RFPQVDFQMVTMSTRGDRDTSRALLEFGGK 95
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
+F EE E+ + G+ID AVHSAKDMP ++++GL IS LPR +D+ I + + D
Sbjct: 96 AVFVEEFEEAIFKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDILIYKSGRIF-DR 154
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180
V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL
Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYRNAECKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214
Query: 181 ---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
K+++ ++ E P+ QG I IET + + ++V+ IN +
Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYISTESMLPAACQGIIAIETRTSG-EVYDMVRAINDTE 273
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF---YGIVLASDGK-----IFHEVS 277
+ + CERA L+ L+ C I ++ G + +SD + H +
Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELHGDHMKLSLMKADAASSDKEKDEEIQIHRKT 333
Query: 278 RNGNRCDAINI 288
GN + +
Sbjct: 334 VEGNTAEWEQL 344
>gi|167769475|ref|ZP_02441528.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM
17241]
gi|167668443|gb|EDS12573.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM
17241]
Length = 295
Score = 278 bits (712), Expect = 8e-73, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 7/300 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K ++G+R S LA+ A ++ + P + ++ + T GD+I +RTL +IGGKGL
Sbjct: 2 KHLKVGSRESRLAVIQAKLAMDAVREW--DPEIELELVAMKTTGDKILDRTLDKIGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F E++ L++G +D VHS KD+P L L ++ + R D RD + + +L
Sbjct: 60 FVRELDAALLNGMVDFTVHSCKDLPMDLDPRLPLAGFSKRADPRDALVLPNG--VYELDP 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IG +S RR L + V RG ++TRL KL++ + A++LA AG+ RL E
Sbjct: 118 AKPIGCASARRAVQLKKLFPGQPVAPVRGNVQTRLQKLDDGQYAALVLAAAGLVRLGLED 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + ++ P+ GQG + ++ + + D+ D ERAF+ LDG
Sbjct: 178 RITRYFSTDEMLPAAGQGILAVQARAG--ENASYLSAFFDRDSADCALAERAFVRRLDGG 235
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C S A +A +G TL G+ + + G + G R +G + A+ I ++
Sbjct: 236 CTSPTAAYATVQGETLTLRGMDVTAKGAPVF-DTILGPRSQGEALGIELAERILQKRTED 294
>gi|289193013|ref|YP_003458954.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22]
gi|288939463|gb|ADC70218.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22]
Length = 292
Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 12/297 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LAL A + L ++ +++ I + T GDR+ ++ L++IG G+FT
Sbjct: 2 ITIGTRGSKLALYQANKVAELLKNL----GYDVKIKIIKTTGDRVLDKKLSDIG-IGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + +
Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNKDVDFDE-NSKI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR+A L + RG ++TRL KL N AI+L+ AGI RL +
Sbjct: 116 VIGTSSLRRRAFLKFLYPNAKFELLRGNVDTRLRKLKENLYDAIVLSEAGIIRLGI-NLD 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ P+P QG I + ++ + ++++K INHE T+ CERA L E G C
Sbjct: 175 DFNYKRLNILPAPAQGIIAVACKRDDEEMKDILKEINHEKTYLESLCERAALNEFGGGCS 234
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297
A L V+ +D + AI +G+ ++
Sbjct: 235 VPFGALAVYDEKNEILKLDAGVVINDELKSASGEIKCKIDEIDKAIELGKKIGMKLK 291
>gi|304320177|ref|YP_003853820.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503]
gi|303299080|gb|ADM08679.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503]
Length = 324
Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 111/283 (39%), Positives = 154/283 (54%), Gaps = 4/283 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLT 56
M KP RI +R SPLA+A A R L + I + T GDR+ N TL
Sbjct: 1 MSFKPLRIASRRSPLAVAQALWVRDRLAEALGIDEVDRDAAFPHETFVTTGDRMLNPTLA 60
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
+IGGKGLFT+EIE L+ G+ D AVHS KDMP ++ GL ++A RED RD F++ +
Sbjct: 61 DIGGKGLFTKEIEIALLDGQADIAVHSMKDMPAQMPPGLVLAAVPVREDPRDAFVTLDGR 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + + IGTSS RR+A L R R D++++ RG + TRL KL +A LA AG+
Sbjct: 121 PLDQMPAGARIGTSSTRRRAQLARLRPDLALVPMRGNVGTRLQKLAAGEAEGTFLAEAGL 180
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+RL V +E L+ P+ GQGA+C++ + + IN+ T + ERA
Sbjct: 181 RRLGMTDVKREALSPARMLPALGQGALCVQARSGDHETLSACAHINNRPTALAAAAERAL 240
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
++ LDGSCK+ I G A G +L G +L DG+ R
Sbjct: 241 ISGLDGSCKTPIGGLARQTGDSLILEGQILTPDGRRVLRGERT 283
>gi|291563543|emb|CBL42359.1| porphobilinogen deaminase [butyrate-producing bacterium SS3/4]
Length = 827
Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 149/302 (49%), Gaps = 15/302 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+++ RIGTR S LAL ++ P ++PL TKGD+I +L GGK
Sbjct: 5 KRRTIRIGTRKSRLALVQTKMVAEAIEA--SCPEAKCELVPLMTKGDKILKTSLVAFGGK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G F EE E+ L++G+ID AVHSAKDMP L GL I A L RED RDVF++ ++ +
Sbjct: 63 GAFVEEFEQSLLNGDIDLAVHSAKDMPMDLSDGLCIGAVLKREDPRDVFVTVKGRTPERS 122
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+IGT S RR+ ++ D+ RG ++TRL KL + I+LA AG+ RL
Sbjct: 123 PR--IIGTGSPRRQVQIMEH-GDMECRLLRGNVDTRLEKLYQGEYDGIILAAAGLNRLGL 179
Query: 182 EKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E L E F P+ GQG I +E + + +++K +N ++ ++ ER L
Sbjct: 180 FNDPRFSFEFLEPEMFLPAGGQGIIAVEAKKGS-EVLKILKKLNDKEAERALFAERKVLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L C +A+ +A + T + + +G +G ++ A+ +
Sbjct: 239 LLGAGCTAAVGVYAKEENGTFWMGLMRETKNG--LIRRKISGAPENS----MKLAELLVK 292
Query: 299 IS 300
Sbjct: 293 QG 294
>gi|145592441|ref|YP_001154443.1| porphobilinogen deaminase [Pyrobaculum arsenaticum DSM 13514]
gi|158514284|sp|A4WN24|HEM3_PYRAR RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|145284209|gb|ABP51791.1| hydroxymethylbilane synthase [Pyrobaculum arsenaticum DSM 13514]
Length = 297
Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ TR S L++ E + + V P I + T GD + ++ L +IG KG+F
Sbjct: 3 LVVATRGSKLSMLQTEELLAQIKAVE--PSIEFEIKIVKTTGDEVQDKPLYQIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ ++ GE D AVHS KD+P++L GL ++ + R D +S L+ L +
Sbjct: 61 KEVNLAVLRGEADVAVHSLKDLPSELSPGLVLAGFSKRAPPFDAVVSTAGYVLETLPRGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEK 183
++GTSS+RR + R D+ V RG ++TR+NK+ K A ++A AGI RL
Sbjct: 121 LVGTSSVRRAEFVKAIRPDVRVEPLRGNVDTRINKILQGKYDAAIMAVAGIYRLYGASPP 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +L E PP PGQG + + +L+K + ER FL +
Sbjct: 181 IKLAVLRPEVLPPPPGQGIVAAVVREADSWLIDLLKKASDPKASLEAIAEREFLKAVGAG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C AI G A+ + T+ F + G + V G+ D + +GR AA+ IR
Sbjct: 241 CHVAIGGVAFARNDTVEFIAGYAS--GGRKYIVRVVGD--DPVEVGRRAAEEIRK 291
>gi|220913234|ref|YP_002488543.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6]
gi|219860112|gb|ACL40454.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6]
Length = 332
Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats.
Identities = 97/332 (29%), Positives = 157/332 (47%), Gaps = 33/332 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL +T L V P + ++ + T GD + L+++GG G+F
Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIRTDGD-VLTGPLSQMGGTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ E D AVHS KD+PT GL ++A R D+RDV + L DL
Sbjct: 58 VAALRDALLRNECDVAVHSLKDLPTGAAVGLSLAATPKRVDVRDVLCARDGLKLADLPAG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--------------NNKAHAIL 170
+ +GT S RR A L R+D+ ++D RG ++TRL ++ + A++
Sbjct: 118 AKVGTGSPRRAAQLRAARADLEIVDIRGNVDTRLGRVPGLPGNATNEVVPGKSCDLDAVV 177
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN------------PKAQELV 218
LA AG++R+ + + E L + P+ GQG++ IE+ + + +
Sbjct: 178 LAAAGLERISRLDAVSEYLEPDVMLPAAGQGSLAIESRTADAPRKPGSTEGSQEVLAQAL 237
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
++ DT +V ERA LA L+ C + + +AY KGS L+ +V A DGK R
Sbjct: 238 AALDDPDTRLAVTAERALLARLEAGCAAPVGAYAYRKGSMLHLEAVVCAVDGKASVRDKR 297
Query: 279 NGN---RCDAINIGRDAAQYIRFISNKNVFNF 307
+ A +G + A+ + ++ +
Sbjct: 298 ATDGLTEVGATLLGIELAEVLLAGGAADIADL 329
>gi|227832129|ref|YP_002833836.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
gi|262184020|ref|ZP_06043441.1| porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
gi|254800247|sp|C3PKG2|HEM3_CORA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|227453145|gb|ACP31898.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
Length = 296
Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA + + L + + ++T+GD N E G G+FT
Sbjct: 2 LKIGTRGSLLATTQSGHVQEWLQQK----GYEAELHIVTTQGDV--NMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + + GE + AVHS KD+PT R+D+R+ I+ +LK+L +
Sbjct: 56 QALREAVDRGECEIAVHSFKDLPTA-ADERFDLVVPQRQDVREALIARDGLTLKELPEGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG I+TR+ K+ + + A+LLAYAG+ R +
Sbjct: 115 RVGTSAPRRISQLRAMRPDLDIRPLRGNIDTRMGKVTSGELDAVLLAYAGLVRAGYAERA 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ + E F P+P QGA+ IE +A + + ++ + ER L++L+ C
Sbjct: 175 TEVFDPEVFMPAPAQGALAIEAVKG-TEAAKAIALLADGPATAATRAERTVLSQLEAGCT 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A ++ +G L G V A DG G +A +GR ++ + +V
Sbjct: 234 APVAATSHWEGEQLVVRGGVFALDGSRQLIAQAQGAASEAEELGRAVSKELFAQGAADVL 293
>gi|291546286|emb|CBL19394.1| hydroxymethylbilane synthase [Ruminococcus sp. SR1/5]
Length = 257
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 6/259 (2%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T GD I +RTL ++GGKGLF +E++K LI G +VHS KDMP ++ + L + A+
Sbjct: 1 MKTTGDIILDRTLDKVGGKGLFVKELDKALIDGRSILSVHSLKDMPMEVPEELPLLAFSK 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RDV + S +L +G SSLRR L + D+ V RG ++TRL KL+
Sbjct: 61 REDPRDVLVLPEGAS--ELDKSKPLGCSSLRRTLQLKKLYPDMDVRSIRGNLQTRLRKLD 118
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ A++LA AG+KRL I ++ P+ GQG + ++ +A + ++
Sbjct: 119 EGQYSALILAAAGLKRLGLGSRINRYFTADEIIPAAGQGILAVQGRKG--EAYDFLEGYC 176
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGN 281
+D W + + ERAF+ LDG C S +A A G +Y G+ DG + + GN
Sbjct: 177 DKDAWTAGSAERAFVKLLDGGCSSPVAAHAEILGDEIYLRGLYYNEKDGS-YVTGTLRGN 235
Query: 282 RCDAINIGRDAAQYIRFIS 300
+ DA ++GR+ A+ +R
Sbjct: 236 KADAESLGRELAETLRKKG 254
>gi|317026261|ref|XP_001389286.2| porphobilinogen deaminase [Aspergillus niger CBS 513.88]
Length = 329
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/331 (29%), Positives = 140/331 (42%), Gaps = 41/331 (12%)
Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54
M + R+GTR S LAL A L H P + +GD +
Sbjct: 1 MSQNTTTTVQELRLGTRNSKLALVQAEHVSKELTSAH--PGVQFPWQTVVVRGDADKSSP 58
Query: 55 LTEIGG-----KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+ G K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D
Sbjct: 59 FLKFAGPSDAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDA 118
Query: 110 FISH-----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN- 163
+ L L SV+GTSS RRKALL + V + RG + TRL KL++
Sbjct: 119 LVIKEGLRSQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDP 178
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I
Sbjct: 179 EGPFSAIILATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIE 238
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHE 275
T ER+ L L G C S +A + + L V
Sbjct: 239 DLVTRRICLAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDAEV---------- 288
Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G DA +G AQ + + +
Sbjct: 289 ----GTDEDAEALGATVAQQLLKNGGQALLE 315
>gi|327403451|ref|YP_004344289.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823]
gi|327318959|gb|AEA43451.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823]
Length = 304
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 94/259 (36%), Positives = 144/259 (55%), Gaps = 10/259 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL A + L + + I ++TKGD+I + + ++ GKG
Sbjct: 2 RNIRIGSRGSDLALWQANHVKKQLEALGA----EVGITIITTKGDQIQDLSFDKLEGKGF 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD--- 120
FT+EIE+ L+ ID AVHS KD+ T +GL I+A RE+ DV + H KD
Sbjct: 58 FTKEIEQALLDNSIDLAVHSHKDLETNTPEGLIIAAVSERENPADVLLIHPNAFDKDEFW 117
Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR- 178
L +V+GTSS RRK+ ++ +RSDI + D RG + TRL KL + AILLA AG+ R
Sbjct: 118 SLKKGAVVGTSSARRKSQVIAFRSDIEIKDLRGNVPTRLQKLIDGGYDAILLAKAGLDRL 177
Query: 179 -LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
L + + + +L+ E+F P+P QG + ++ N+ + ++ +NHED + ER L
Sbjct: 178 QLDLKGMHEVVLDPEEFIPAPAQGVLALQIRENDNELYNFMQAMNHEDIQSQIALERNLL 237
Query: 238 AELDGSCKSAIAGFAYCKG 256
L G C+ + + +G
Sbjct: 238 NRLQGGCQLPLGAYCPEEG 256
>gi|148271775|ref|YP_001221336.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829705|emb|CAN00621.1| hemC [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 328
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LALA + + + ++P++T GD + +L+ +GG G+F
Sbjct: 13 TLRIGTRGSALALAQTRAIAAEITGAS---GLEVELVPVTTHGDT-SRESLSSLGGTGVF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GE D VHS KD+PT GL +++ RED RDV + +L L
Sbjct: 69 ASALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ +
Sbjct: 129 ARVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIGRIDA 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAEL 240
E L ++ +P +PGQGA+ +E + + V+ ++ T +V ER LA L
Sbjct: 189 ATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAAL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDA------ 292
+ C + I +A + L +V DG S + D +G A
Sbjct: 249 EAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGP 308
Query: 293 -AQYIRFISNKNV 304
++ + ++
Sbjct: 309 VSRELLDAGAADL 321
>gi|85374658|ref|YP_458720.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594]
gi|84787741|gb|ABC63923.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594]
Length = 292
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD+I +R L EIGGK L+T+E++ L G
Sbjct: 1 MAQAVETRNRLCAAHGWDEEAVELVPVVASGDKIQDRPLAEIGGKALWTKELDAWLGEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T + L I+A LPRED RDV + ++D+ + +GTS+ RR A
Sbjct: 61 IDAAVHSMKDVETFRPEALHIAAILPREDKRDVLVGAAG--IEDIPKGAKVGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L R D+ V+ FRG + TRL KL +A LLA AG+KRL + + L ++++ P
Sbjct: 119 QMLSLRPDVEVVTFRGNVATRLGKLEAGEADVTLLAAAGLKRLGELDIGS-PLELDEWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QGAI IE ++ A+ L+ I+H + + ERA LA L+G+C S IA A G
Sbjct: 178 AAAQGAIGIECRADDAGARALLSPIDHAPSRAEIMAERALLAGLNGTCHSPIAVLAEAMG 237
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ L + + DG D I A + ++ +
Sbjct: 238 NRLSIRATLYSPDGTDKVAGEGELALADYAAI-ERLAADLLDRASPAI 284
>gi|303244099|ref|ZP_07330437.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1]
gi|302485484|gb|EFL48410.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1]
Length = 311
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 155/314 (49%), Gaps = 17/314 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LALA + ++ L ++++ ++ I + T GD+ L+E+G G+F
Sbjct: 2 KIIIGTRGSKLALAQTYYIKNLLENLNENLSIDVKI--IKTTGDKNQKSKLSELG-LGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K+++ EID AVHS KD+PT + L ISA RE D+ I + + +
Sbjct: 59 TKELDTKMLNNEIDIAVHSLKDVPTVWNENLTISATPKRESYHDLIIWNKNNDIDIEKDN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++GTSS+RRKA L ++ RG I+TRL KL N AI+LA AG+ RLK +
Sbjct: 119 LIVGTSSIRRKAFLSIKYPNLKTKLLRGNIDTRLRKLRENNYDAIILAEAGLNRLKIDLS 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P+P QG I + + ++ + +++K IN T+ ER L E G C
Sbjct: 179 EFNYKRLKI-LPAPAQGVIGVASRKDDKEIIDILKKINDNKTYLESIAERYALREYGGGC 237
Query: 245 KSAIAGFAYCK--GSTLYFYG-IVLASDGK---IFHEVSRNGNRCD---AINIGRDAAQY 295
++ + + LY +V +GK I E + D A IG +
Sbjct: 238 QAPFGALSKYDTKNNELYLTCDVVYTLNGKNNIISKEDKIQCDIEDIHLAKKIGIKLGKE 297
Query: 296 IR----FISNKNVF 305
I+ S K++
Sbjct: 298 IKEAESEKSEKHIL 311
>gi|323691803|ref|ZP_08106060.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum
WAL-14673]
gi|323504169|gb|EGB19974.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum
WAL-14673]
Length = 297
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 144/297 (48%), Gaps = 6/297 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIG+R S LA+ + + V P + ++ + T GD I +++L +IGG
Sbjct: 1 MINGTIRIGSRESVLAVIQSELIIEEIKRV--CPGVSAQLVTMKTTGDMILDKSLEQIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + L+
Sbjct: 59 KGLFVKELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLRKG--LES 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+
Sbjct: 117 LPAGPVIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++ PS GQG + ++ + +K ++ D+ ERAF+ L
Sbjct: 177 FEGRISRYFSVDEIIPSAGQGIMAVQGRKED--YFPFIKEVDAPDSRAMALAERAFVRIL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
DG C S A A LY G+ + G +A +G A ++
Sbjct: 235 DGGCSSPCAACAEAAAGRLYLRGLYYDEASDRYITGEMEGMAEEAEQLGVKLALTLK 291
>gi|85710451|ref|ZP_01041515.1| porphobilinogen deaminase [Erythrobacter sp. NAP1]
gi|85687629|gb|EAQ27634.1| porphobilinogen deaminase [Erythrobacter sp. NAP1]
Length = 292
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/288 (33%), Positives = 149/288 (51%), Gaps = 4/288 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A AFETR L H + ++P+ GD++ +R L EIGGK L+T+E++ L G+
Sbjct: 1 MAQAFETRERLCKAHGWAEGEVELVPVVASGDKVLDRPLAEIGGKALWTKELDAWLAEGK 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHSAKD+ T + +A+LPR D RD + A S+ D+ + +GTS+ RR +
Sbjct: 61 IDVAVHSAKDVETIRPDAFRFAAFLPRADRRDALVG--AASIADIPRGATVGTSAPRRAS 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D V+ FRG + TRL KL +A LA AG++RL + +V L D+ P
Sbjct: 119 QLLNLRPDCKVVTFRGNVATRLGKLEAGEADVTFLAAAGLERLGQSEVGA-PLETGDWIP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QG I +E ++ +A EL+ I+H T + ERA LA+L G+C S +A
Sbjct: 178 AAAQGVIALECRADDDEAGELLAAIDHAATRAELEAERALLAKLGGTCHSPVAVLCSGDA 237
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
L + + DG + + + D + A + + +
Sbjct: 238 GELTMRAALFSPDGSERVDGEASFSAGDHAPV-HALAADLLHRATPAI 284
>gi|282165595|ref|YP_003357980.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE]
gi|282157909|dbj|BAI62997.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE]
Length = 303
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 104/301 (34%), Positives = 150/301 (49%), Gaps = 6/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA+A A + L + I + T GD T+ L + G G F
Sbjct: 1 MRVGTRGSRLAMAQARKVCGLLSERGVEASPAI----IKTSGDVHTSEPLHAMKGVGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ +L++GE+D AVHS KD+PTK +GL +A L RE DV ++ + L +L +
Sbjct: 57 REIDDRLLAGEVDIAVHSLKDVPTKRPEGLATAAVLKRESALDVAVTREGKKLSELEEGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR AL+ + + + RG ++TRL KL + AILLA AG+ RL +I
Sbjct: 117 VVGTSSTRRAALIKKHYPHLRTNNIRGNVDTRLRKLGEGEYDAILLAEAGLIRLGM-DII 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KE L+ DF PS QG I I P+ + V +N DTW ERA + LDG C
Sbjct: 176 KERLDPYDFVPSANQGVIAIVARPGTPEF-DAVSALNDHDTWLETGVERAIASALDGGCV 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ + +A +G L VL+ DG+ V D A+ + +++
Sbjct: 235 APMGAYARLEGDGLDVVCEVLSLDGRRQARVRETIPVKDHERHALRLAEKLAACGGRDLV 294
Query: 306 N 306
Sbjct: 295 E 295
>gi|294637953|ref|ZP_06716220.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685]
gi|291088885|gb|EFE21446.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685]
Length = 230
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 89/215 (41%), Positives = 123/215 (57%), Gaps = 2/215 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ RI TR SPLAL A R L + P I ++P+ T+GD + + L ++GGK
Sbjct: 18 AQQTLRIATRQSPLALWQAHYVRDQL--LTHWPQLTIELVPMVTRGDVLLDTPLAKVGGK 75
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P GL + PRED RD F+S SL L
Sbjct: 76 GLFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICPREDPRDAFVSPHFASLDQL 135
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 136 PPGSIVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGEYDAIILAAAGLKRLQL 195
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216
E I+ L E P+ GQGA+ IE + + +
Sbjct: 196 EARIRTPLTAEQSLPAVGQGAVGIECRLADEATRA 230
>gi|467039|gb|AAA17223.1| hem3b [Mycobacterium leprae]
Length = 315
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + G +D AVHS KD+PT ++A PR D RD ++ L +L S
Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ R + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARPGRLDEV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S A +G A +
Sbjct: 236 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|256787075|ref|ZP_05525506.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 303
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 81/301 (26%), Positives = 149/301 (49%), Gaps = 17/301 (5%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A + + ++ V P + ++ ++T GD + L +IGG G+F + L+ GE
Sbjct: 1 MAQSGQVADAVSQVTGRP---VELVEITTYGDT-SREHLAQIGGTGVFVAALRDALLRGE 56
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
+D AVHS KD+PT +GL ++A RED RDV ++ A+ L DL + +GT + RR A
Sbjct: 57 VDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLTDLPRGARVGTGAPRRMA 116
Query: 137 LLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
L + +I + RG ++TR+ + + + A++LA AG+ R+ + + + L+++
Sbjct: 117 QLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLNRVGRIDEVTDFLSVD 176
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+PGQGA+ +E +N + ++ T +V ER+ LA L+ C + + A
Sbjct: 177 TVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERSLLAALEAGCSAPVGALA 236
Query: 253 YCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFISNKN 303
+ G+V +DG ++S G + A+ +G + A +
Sbjct: 237 DLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAALALGGELAAEMLAQGAAG 296
Query: 304 V 304
+
Sbjct: 297 L 297
>gi|323484735|ref|ZP_08090094.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163]
gi|323401972|gb|EGA94311.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163]
Length = 297
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 144/297 (48%), Gaps = 6/297 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIG+R S LA+ + + V P + ++ + T GD I +++L +IGG
Sbjct: 1 MINGTIRIGSRESVLAVIQSELIIEEIKRV--CPGVSAQLVTMKTTGDMILDKSLEQIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + L+
Sbjct: 59 KGLFVKELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLRKG--LES 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+
Sbjct: 117 LPAGPVIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++ PS GQG + ++ + +K ++ D+ ERAF+ L
Sbjct: 177 FEGRISRYFSVDEIIPSAGQGIMAVQGRKED--YFPFMKEVDAPDSRAMALAERAFVRIL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
DG C S A A LY G+ + G +A +G A ++
Sbjct: 235 DGGCSSPCAACAEAAAGRLYLRGLYYDEASDRYITGEMEGMAEEAEQLGVKLALTLK 291
>gi|311895732|dbj|BAJ28140.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 323
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 104/314 (33%), Positives = 161/314 (51%), Gaps = 16/314 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR SPLALA ++L + +P +P++T+ D L ++GGKGL
Sbjct: 9 RTLRIGTRSSPLALAQTDMVVAALRE--HVPDLVAETVPVTTEADLWQGD-LAQLGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
+T++I+ L +G +D AVH KD+P L +GL +AY+ R D+RDV + ++L
Sbjct: 66 YTKQIDAMLQAGAVDMAVHCVKDVPGDVPLPRGLVFAAYMERPDVRDVLLFPEGSGYRTL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-----AHAILLAY 173
DL +VI +S++RRKA +LR R D+ V+ RG + +RL KL+ K A ++LA
Sbjct: 126 ADLPPGAVILSSAVRRKAQILRARPDLEVVRVRGAVGSRLEKLDGAKQIDVHADGMVLAA 185
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ RL E +L++++ P+ G G + +E +P L++ INH T V E
Sbjct: 186 AGLARLGIE-RPGYVLSMDEMLPAVGAGVLGLECRQGDPATAALLEKINHPRTQREVTAE 244
Query: 234 RAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRD 291
R L L G C S IAG+ + L G+V +G F R D +G
Sbjct: 245 RVLLHNLRGHCNSPIAGYCTTEPDGQLSLRGMVFDREGSKFANAMLWNEHRQDPATLGAR 304
Query: 292 AAQYIRFISNKNVF 305
A + + +
Sbjct: 305 VAAELLRQGAREII 318
>gi|260905127|ref|ZP_05913449.1| glutamyl-tRNA reductase [Brevibacterium linens BL2]
Length = 825
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 94/334 (28%), Positives = 151/334 (45%), Gaps = 40/334 (11%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA + + L + + I+ + T+GD + LT GG
Sbjct: 475 SGRTIRLGTRRSKLARSQSTAIAHQLAALTGW---RVEIVEVVTEGDVNMS-PLTGFGGT 530
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + + L G+ID AVHS KD+PT G+Q++A PR D DV I S +L
Sbjct: 531 GVFVSAVRQALHQGKIDIAVHSLKDLPTTPEAGIQMAAIPPRVDPADVLIGRDGLSFAEL 590
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GT S RR L R DI V RG ++TR+ + + + A++LA AG++R+ +
Sbjct: 591 PAGSVVGTGSPRRAVQLRAARPDIEVRGVRGNVDTRIAHVRDGRLDAVVLAAAGVRRIGR 650
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETH-------------VNNPKAQELVKVINHEDTWD 228
+ L+ + P+PGQGA+ +ET + + + +K ++ E T
Sbjct: 651 LAEATDSLDFDTMLPAPGQGALAVETRGADSPFALDNEVMEADAEVRTQLKRLHDETTDL 710
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---------- 278
+V CERA L+ + C + I A +GS ++ DGK+
Sbjct: 711 AVTCERAILSRAEAGCSAPIGALATIQGSDFVVDAVMADDDGKLARTRQVAPLPTTPDVD 770
Query: 279 --NGNRCD-----------AINIGRDAAQYIRFI 299
+G+ A +G AA+ +
Sbjct: 771 LDSGSANQLSITGKELARLADELGTAAAEDLLGQ 804
>gi|284161707|ref|YP_003400330.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631]
gi|284011704|gb|ADB57657.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631]
Length = 292
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 108/301 (35%), Positives = 160/301 (53%), Gaps = 12/301 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ +GTR S LALA + L + +++ I + + GD + ++ L E G
Sbjct: 1 MSERVV-VGTRGSKLALAQTSKVVERLKE----EGYSVEIRIIKSTGDIMKDKPLYEFKG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F +E L+ GEID AVHS KD+P+ +L+G+ +SA L R+ D FI+ +SL++
Sbjct: 56 SGAFVRALEHALVRGEIDVAVHSYKDIPSNMLEGVTVSAVLERDSPYDAFIARNGESLEE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ ++VIGTSSLRR+A L +RSD+ + RG ++TRL KL AI+LA AGI+RL
Sbjct: 116 IKPNAVIGTSSLRRRAQLKLYRSDLRFENLRGNVDTRLRKLREGLYDAIVLAEAGIQRLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + L IE F P QG I ++T V LVK +NHE+TW ER + L
Sbjct: 176 L-NVKYQRLPIERFVPPANQGIIAVQTRVGEED---LVKFMNHEETWIEAEVERIVMKTL 231
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C +A C+G + V+ DG+ F + +R AI R+ A+ R
Sbjct: 232 GVGCAIPAGIYAECRG-KVRLIVQVIR-DGREFKVIE-ELSRESAIEEAREIAENFREEV 288
Query: 301 N 301
Sbjct: 289 G 289
>gi|171914695|ref|ZP_02930165.1| Hydroxymethylbilane synthase [Verrucomicrobium spinosum DSM 4136]
Length = 318
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 151/313 (48%), Gaps = 20/313 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----- 59
R+GTR S LAL A ++L H P + ++T GD+ + +E
Sbjct: 8 TLRLGTRGSELALRQAEMVEAALHAAH--PYLRVERKVIATTGDKRPDLRFSEFTEGDRL 65
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KG+FT+E+E L SGEID AVHS KD+PT L + I+ LPR I DV IS +L
Sbjct: 66 DKGIFTKELEIALASGEIDIAVHSLKDVPTVLDEKFFIAGVLPRAPIEDVLISREGYTLA 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
L + +GTSS+RR L + ++ RG + TR+ KL + AILLA AG++R
Sbjct: 126 TLPAGAKVGTSSVRRIRQLQWLNPGVECVEIRGNVPTRIRKLFAPSDLDAILLARAGLER 185
Query: 179 LKKEK----------VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
L + IL+ E+F P+ GQGAI IE V++ E +K INHE+T+
Sbjct: 186 LSLLDGEHVVVDGQPLHAVILDCEEFLPAAGQGAIGIEARVDDAHTLEFLKAINHEETYA 245
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS-D-GKIFHEVSRNGNRCDAI 286
V ER FL L C++ I + + L V D G+ EV+
Sbjct: 246 RVTAEREFLHILKAGCQTPIGAHTFLENGVLQMKVRVFDETDPGRPPKEVTSTEPYHSPK 305
Query: 287 NIGRDAAQYIRFI 299
+ + A + +
Sbjct: 306 GLAAEVAALVTAL 318
>gi|291542328|emb|CBL15438.1| porphobilinogen deaminase [Ruminococcus bromii L2-63]
Length = 286
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 102/295 (34%), Positives = 155/295 (52%), Gaps = 14/295 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA +L ++ P I + +ST GD+ ++ LT +GGKG+F
Sbjct: 2 TIKIGTRKSRLALAQTEMLIKTLK--NRFPNVKIETVYISTTGDKTLDKPLTALGGKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+SGE D AVHSAKD+PTK+ GL+ISA LPR DVF++ KD
Sbjct: 60 IKELEMSLLSGETDVAVHSAKDLPTKIADGLEISAVLPRGSYGDVFVTRNNFETKD---G 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK--- 181
VIGT SLRRK + + D RG ++TRL KL N + A++LA AG++RL
Sbjct: 117 FVIGTGSLRRKLFAEKIYPNAKFKDIRGNVDTRLKKLLNGEYDALVLAKAGLERLDLCNG 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + ++F P+P QG + IE+ N+ + +++ I+ ++T S ER L L+
Sbjct: 177 EDYTVTPFDADEFLPAPCQGIVAIESRKNS-EVSKMLAEISDKNTMLSFETERQVLHSLN 235
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + + + + + L++D K VS + I + + I
Sbjct: 236 ADCSTPVGAISKVENDRITLS---LSADCKK--TVSGTDEISNRIKLAKRLVSEI 285
>gi|329848284|ref|ZP_08263312.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19]
gi|328843347|gb|EGF92916.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19]
Length = 311
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 8/307 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIGGK 61
+IGTR S LAL + ++ + ++T+GDRI +R L E GGK
Sbjct: 4 LKIGTRGSKLALTQCGWVQRRIVAALGEDVARADEVAPLTVITTQGDRIQDRRLIEAGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT+EIE L+ G+ID AVHS KDMP + GL + A RED RD F+S ++L DL
Sbjct: 64 ALFTKEIEDALLRGDIDVAVHSLKDMPAADVPGLSLCAIPVREDPRDAFLSPNYETLADL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT+S+RR+A L R D+ VI RG ++TRL KL A+LLA AG+ RL
Sbjct: 124 PQGARLGTASMRRQAQALAQRPDLQVIMTRGNVDTRLAKLQAGACDALLLAAAGLNRLGL 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I+ ++ + F +PGQGA+ I+ + A + ++ T+ + ER L L+
Sbjct: 184 SHHIRSHIDPDLFASAPGQGALAIQCRTEDLGAGWM-AKVHDVTTFLRIQAERGALEALE 242
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF--HEVSRNGNRCD-AINIGRDAAQYIRF 298
SC++A+ +A + L + L++DG S + A ++G I+
Sbjct: 243 ASCRTAVGAYATLENDQLALFVEALSADGSKRWQRRESLSAPTAQSARDLGLKLGHEIKT 302
Query: 299 ISNKNVF 305
+ +
Sbjct: 303 EAGPELI 309
>gi|67989478|ref|NP_001018179.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe 972h-]
gi|12644400|sp|Q09899|HEM3_SCHPO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|5834802|emb|CAB55280.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe]
Length = 336
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/315 (28%), Positives = 147/315 (46%), Gaps = 18/315 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GKGLF 64
IGTR S LA+ + R L + P II T GD I ++ L E K L+
Sbjct: 9 IGTRKSKLAVIQSEIIREELEKHY--PHLEFPIISRDTIGDEILSKALFEFKRQLAKSLW 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L++ + VHS KD+P+++ G+ I+ R D + +++ DL
Sbjct: 67 TRELEALLVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIVFKAGSHYKTVADL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
SV+GTSS+RR+ALL R + +D RG + TRL KL +++ ++LA AG+ RL
Sbjct: 127 PPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L + GQGA+ +E ++ + E++K + H++T + ERA +
Sbjct: 187 GLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKR 246
Query: 240 LDGSCKSAIA----GFAYCKGS-TLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRD 291
L G C I A S + G VL++DG + + +A +G
Sbjct: 247 LQGGCAIPIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGIT 306
Query: 292 AAQYIRFISNKNVFN 306
A + +
Sbjct: 307 VALALLKNGAGPILE 321
>gi|225569053|ref|ZP_03778078.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM
15053]
gi|225161852|gb|EEG74471.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM
15053]
Length = 298
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 7/296 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LA+ A + ++ P I+ + T+GD+I +R L GGKG
Sbjct: 2 QSIIRIGSRESRLAVKQAEIVKQAVER--NCPDIKAEIVTMKTEGDKILDRRLELAGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+EK L+ G ID VHS KD+P ++ + L + A+ RED RDV I ++ +
Sbjct: 60 LFVKELEKALLDGRIDICVHSLKDVPMEVPEDLPVVAFGEREDPRDVLIYKPGRT--SIP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
VIGTSS RR+ L R + RG ++TRL KL+ +LA AG+KRL E
Sbjct: 118 EGGVIGTSSRRRELQLKRLYPSCTFRSIRGNVQTRLRKLSEEGFDGTVLAAAGLKRLHME 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+V + ++++ P+ GQG + ++ + + ER F A L G
Sbjct: 178 EVAGRVFSVDEIIPAVGQGILAVQGRKGRDY--SWLTSFACGKSRAEAEAEREFAAALGG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C S +A A +G+ L G+ G I+ +R G A +G A+ +R
Sbjct: 236 GCTSPVAAHAQAQGAELKLTGLYYCG-GDIYRTRTRTGETDRARQLGAALAEEMRR 290
>gi|222529189|ref|YP_002573071.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725]
gi|222456036|gb|ACM60298.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725]
Length = 290
Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 6/295 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG R S L+ + +P+ TKGD ++L + G+
Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFQSPGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L+S EID AVHS KD+P ++ I A + RED RDV +S L
Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDPRDVLVSKDGVGFYQLKP 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + +I + P PGQGAICIE ++P + ++ IN + + ER L L G
Sbjct: 179 HVSYVFDINEITPCPGQGAICIECLEDSPY-KSILSKINDVNAYIQTQFERLVLKLLGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C S+I F +Y + +L D + S G++ D +++ + ++
Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGD--KLVKASIEGDKADFLSLANKLSNMLKS 290
>gi|261417417|ref|YP_003251100.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373873|gb|ACX76618.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 351
Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 95/352 (26%), Positives = 152/352 (43%), Gaps = 55/352 (15%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------HNIVIIPLSTKGDR 49
M RI TR S LALA +++ + + ++ ++T+GDR
Sbjct: 1 MSDLKLRIATRKSALALAQTTMAADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD
Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120
Query: 110 FISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
F+S DL + +GT S+RR L R D+ + RG I+TR+ KL +
Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKLA--EL 178
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NPKAQE 216
++LA AG+KR+ + E + E P+ GQG + IET + +
Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIETLNDATVQESRVTGRADLAQ 238
Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY--CKGS----------------- 257
++ +N T+ + E A+L L+ C+ +A FA C+
Sbjct: 239 ILARVNDVATYCIASAEMAYLKALNAGCQFPVASFAEFVCEDGIENRGTCGALEENANRI 298
Query: 258 --TLYFYGIVLASDGKIFHEVSRNGNRC--------DAINIGRDAAQYIRFI 299
TL GI + GN + N+G + A I+
Sbjct: 299 AQTLKIRGIYWDEKSEKLLRAEVAGNVDLNSEDCVQQSKNLGIELACAIQKQ 350
>gi|205374358|ref|ZP_03227156.1| porphobilinogen deaminase [Bacillus coahuilensis m4-4]
Length = 252
Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 97/245 (39%), Positives = 140/245 (57%), Gaps = 3/245 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL L + + + TKGD I + TL+++GGKGL
Sbjct: 2 RKIVVGSRRSTLALTQTNWVIEQLKQLGG--NFTFEVKEIVTKGDVILDVTLSKVGGKGL 59
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ EID AVHS KDMP++L GL + PRED RD IS LKDL
Sbjct: 60 FVKEIEQAMMDKEIDMAVHSMKDMPSELPSGLTLGCVPPREDRRDALISKNHVKLKDLPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182
+VIGTSSLRR A LL R D+ + RG I+TRL KL+ + AI+LA AG+ R+ +
Sbjct: 120 GAVIGTSSLRRGAQLLAVRPDLDIKWIRGNIDTRLAKLDGEEYDAIILAAAGLARMGWAK 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V+ E L+ + P+ GQGA+ IE ++ + +L+ N ++T + ER FL +++G
Sbjct: 180 DVVTEFLSEDICVPAIGQGALGIECREDDEELLDLLSKFNDKETERTTKAERTFLHKMEG 239
Query: 243 SCKSA 247
S
Sbjct: 240 GVPSP 244
>gi|312622563|ref|YP_004024176.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis
2002]
gi|312203030|gb|ADQ46357.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis
2002]
Length = 290
Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 147/295 (49%), Gaps = 6/295 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG R S L+ + +P+ TKGD ++L + G+
Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L S EID AVHS KD+P ++ I A + RED RDV +S L
Sbjct: 59 FVKEIELALFSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDSRDVLVSKDGVGFYQLKP 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ I ++ + P PGQGAICIE ++P + ++ IN D + ER L L G
Sbjct: 179 RVSYIFDVNEITPCPGQGAICIECLKDSPY-KNILNKINDTDAYIQTQFERLVLKFLGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C S+I F +Y + +L D + S G++ D +++ + ++
Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGD--KLVKASIEGDKADFLSLANKLSNMLKS 290
>gi|196004682|ref|XP_002112208.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens]
gi|190586107|gb|EDV26175.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens]
Length = 314
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 96/335 (28%), Positives = 141/335 (42%), Gaps = 66/335 (19%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME+ RIGTR S LA+ +L ++H P I I+ + T GDR+ ++ L EIG
Sbjct: 4 MEETVVRIGTRKSQLAMIQTHSVVDALREIH--PKARIEIVTMDTIGDRVLDKALPEIGQ 61
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
LFT+++E L +ID +HS KD+P+ L +GL I+A
Sbjct: 62 TNLFTKDLEVALTDNKIDLIIHSLKDVPSTLPEGLAIAAI-------------------- 101
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
+VIGTSSLRR A L R + + RG + TRL KL+ A++LA AG++
Sbjct: 102 ---GNVIGTSSLRRIAQLKRRFPHLKFENVRGNLNTRLKKLDESGIYDALVLAGAGVE-- 156
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
L ++ + GQGA+ IE N+ K L+ D+ ERAFL
Sbjct: 157 ---------LTPDECLYAIGQGALGIEIRKNDKKTFSLISAYTDFDSLVCNAAERAFLRF 207
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH----EVSRNG--------------- 280
LD C I + + L G V + DG E + +G
Sbjct: 208 LDKGCSVPIGVYTEFTENKLKITGAVFSLDGSKRVQYSDECTISGLNAKDDCESNYESLS 267
Query: 281 ----------NRCDAINIGRDAAQYIRFISNKNVF 305
+ +A +G+ A+ I V
Sbjct: 268 SILCPSEMCNSLIEAERLGKYVAEMILKNHGGEVL 302
>gi|325102976|ref|YP_004272630.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145]
gi|324971824|gb|ADY50808.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145]
Length = 532
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 85/262 (32%), Positives = 137/262 (52%), Gaps = 12/262 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ F+IGTR S LAL A S L + + I + T+GD I N L ++ GKG
Sbjct: 3 RIFKIGTRGSDLALWQANHVASKLNEA----GYQTEIKIIKTQGDNILNLRLDKLEGKGF 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----SLK 119
FT+E+E+ L++G+ID AVHS KD+PT+ GL ISA RED +V +
Sbjct: 59 FTKELEEHLLAGDIDLAVHSHKDLPTENPPGLFISAVSEREDPSEVLLILKDCVDTSKKL 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ + ++GTSS RR++ + R D+ D RG + TR+ KL + AI+LA AG+ RL
Sbjct: 119 SVKHNGLVGTSSNRRQSQISSVRPDLEFEDLRGNVNTRIQKLRDENYDAIVLAKAGVSRL 178
Query: 180 KKEKVIKEILNIE---DFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERA 235
+ I IE + P+P QG + ++ + + ++K VI++++ + ++ ER
Sbjct: 179 NLDLSEFYIETIEPVAEMIPAPAQGVLAVQIREGDSELDAVLKEVIHNQEVANCISVERK 238
Query: 236 FLAELDGSCKSAIAGFAYCKGS 257
L +G C + + +
Sbjct: 239 VLNLFNGGCHMPLGSYCKKEDD 260
>gi|312793378|ref|YP_004026301.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180518|gb|ADQ40688.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 290
Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 151/293 (51%), Gaps = 6/293 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG R S L+ + +P+ TKGD ++L E G+
Sbjct: 2 KKLRIGARDSRLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKEFKSPGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L
Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGLGFYQLKS 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR+ L R DI VI+ RG IETRL+K+ + I+LAYA +KRLK +
Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVINIRGNIETRLSKIQSEGLDGIVLAYAALKRLKLDS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ I +I + P PGQGAICIE ++P + ++ IN D + ER L L G
Sbjct: 179 YVSYIFDINEITPCPGQGAICIECLKDSPY-KSILSKINDADAYIQTQFERLVLKFLGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C S+I F + +Y + +L D + S GN+ D +++ ++ +
Sbjct: 238 CHSSIGVFCKTDQNKIYAFASLLRGD--KLVKASIEGNKDDFLSLANKLSKML 288
>gi|170783140|ref|YP_001711474.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157710|emb|CAQ02912.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 328
Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats.
Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LALA + + + ++P++T GD + +L+ +GG G+F
Sbjct: 13 TLRIGTRGSALALAQTRAIAAEITGAS---GLEVELVPVTTHGDT-SRESLSSLGGTGVF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GE D VHS KD+PT GL +++ RED RDV + +L L
Sbjct: 69 ASALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ +
Sbjct: 129 ARVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIDRIGA 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAEL 240
E L ++ +P +PGQGA+ +E + + V+ ++ T +V ER LA L
Sbjct: 189 ATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAAL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDA------ 292
+ C + I +A + L +V DG S + D +G A
Sbjct: 249 EAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGP 308
Query: 293 -AQYIRFISNKNV 304
++ + ++
Sbjct: 309 VSRELLDAGAADL 321
>gi|281348599|gb|EFB24183.1| hypothetical protein PANDA_019874 [Ailuropoda melanoleuca]
Length = 298
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 39/290 (13%)
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
+IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 1 QIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKF 60
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLA 172
++L+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA
Sbjct: 61 VGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILA 120
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG++R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T
Sbjct: 121 AAGLQRMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIA 180
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST------LYFYGIVLASDGKIFHEVSR-------- 278
ERAFL L+G C +A K LY G V + DG + +
Sbjct: 181 ERAFLRHLEGGCSVPVAVHTAMKDGQASRGRWLYLTGGVWSLDGSDSMQETMQATIRVTA 240
Query: 279 ---NGNRCD------------------AINIGRDAAQYIRFISNKNVFNF 307
+G D A N+G A + KN+ +
Sbjct: 241 QLEDGPEDDPQLVGITARNIPREAQLAAENLGISLASLLLNKGAKNILDV 290
>gi|209886240|ref|YP_002290097.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5]
gi|209874436|gb|ACI94232.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5]
Length = 338
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 20/322 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S +ALA E L P ++ I+ T GD+ L ++GGK
Sbjct: 10 TDKAMRIGTRKSVMALAQTSEIARQLTAA--DPALDVEIVKFETTGDQDQTGKLLDLGGK 67
Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G F +I + G ++ A+HS KDMP + GL I A L R+ D + +L
Sbjct: 68 GGAFVAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGATLTRDPPTDALVVRHGVTLA 127
Query: 120 DL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------- 165
DL IGT+++RR A + R + +I FRG +TR+ KL+N +
Sbjct: 128 DLRRTGGKGFKIGTNAVRRAAYVRRLFPECEIIHFRGAADTRIRKLDNGEKQRLPEGGEV 187
Query: 166 --AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A A+++A AG++R+ I + ++ P+ GQG + +E ++ + I+
Sbjct: 188 GPADALVMAQAGLERVGCADRIAHCFSPDEILPAVGQGIVAVECAASDWCTLARLAQIDD 247
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ ER L L+G C S IAG+A +G + VL F EV+R G
Sbjct: 248 PVSRCCAAAEREVLWVLNGHCNSPIAGYAIVEGDDVLLKAAVLDEANDHFIEVTRRGPAS 307
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
+GR A + +V
Sbjct: 308 RPRELGRAVAFELLAKGAADVI 329
>gi|316935323|ref|YP_004110305.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1]
gi|315603037|gb|ADU45572.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1]
Length = 326
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 20/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63
P RIGTR S +ALA + L + II T GD L GGKG
Sbjct: 4 PVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGGKGGA 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L+DL
Sbjct: 62 FVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLEDLK 121
Query: 123 L----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------A 166
IGT+++RR A R ++ VI FRG ++R+ KL+N + A
Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNGEKQRMPDGSEVGPA 181
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++ +
Sbjct: 182 DALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDNHQS 241
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
+ ER L L+G C S IA + G + VL +G +F E R G
Sbjct: 242 RLCCDAEREVLWVLNGHCNSPIAAHSIITGDEMTLRASVLDLEGGMFIEAVRTGPANRPR 301
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GRD + V
Sbjct: 302 ELGRDVGLELLDKGAAAVIE 321
>gi|300741887|ref|ZP_07071908.1| hydroxymethylbilane synthase [Rothia dentocariosa M567]
gi|300381072|gb|EFJ77634.1| hydroxymethylbilane synthase [Rothia dentocariosa M567]
Length = 371
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 97/363 (26%), Positives = 152/363 (41%), Gaps = 64/363 (17%)
Query: 5 PFRIGTRCSPLALAH----AFETRSSL----MDVHKIPPHNIVIIPLSTKGDRITNRTLT 56
P+ +GTR S LAL A + + I + T GD + L
Sbjct: 4 PYILGTRGSALALTQSTLAAEHIVQVFNAHSREHGAERTLSFDITTVKTDGD-VLTGPLA 62
Query: 57 EIGGKGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
+GG G+F + ++L+ G+ +D AVHS KD+P + GL I+A L RED RD ++
Sbjct: 63 TLGGTGVFAAALRQRLLDGDTPGGVDVAVHSLKDLPAEPCPGLVIAAILEREDPRDALVA 122
Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------- 161
+L L + +GT S RR A + R D+ ++D RG + TR+ ++
Sbjct: 123 RDNLTLDTLPTGARVGTGSPRRAAQVRALRPDLEIVDIRGNVGTRIARVKGLEEHGNRQV 182
Query: 162 -------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202
N A++LA +G+KRL KE VI E L+ P+PGQGA
Sbjct: 183 VVRDSTETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPAPGQGA 242
Query: 203 ICIETHVN-----------NPKAQELVKVI-------NHEDTWDSVNCERAFLAELDGSC 244
+ IE +P+ + V+ + +H +T V ER L L+ C
Sbjct: 243 LAIEVRETEFVNPDTATLFDPEISQPVRTLGEALIAADHFETHLEVTAERRLLRRLEAGC 302
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-VSRNG--NRCDAINIGRDAAQYIRFISN 301
+ I +A K L +V + DG S G + A +G A+ + +
Sbjct: 303 AAPIGAYATVKDGDLVLTAVVASPDGTESLRHTSATGELDVPGAERLGIRVAEDLLQMGA 362
Query: 302 KNV 304
+
Sbjct: 363 AAL 365
>gi|32490989|ref|NP_871243.1| hypothetical protein WGLp240 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166195|dbj|BAC24386.1| hemC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 291
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 84/277 (30%), Positives = 143/277 (51%), Gaps = 1/277 (0%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89
+H P NI ++P+ T GD I KGLF +E+EK L+ + D AVHS KD +
Sbjct: 11 LHYHPKLNIKLVPILTTGDLINKIRNNITNEKGLFIKELEKSLLKYQSDIAVHSMKDFSS 70
Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
L L ++A R+D RD +S+ ++ L ++ +GTSSLRRK LL R D+ +
Sbjct: 71 SFLDSLGLAAICKRDDPRDAIVSNYYNNIISLPNNAKVGTSSLRRKCQLLSIRPDLKIFP 130
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
+G I +RL KLN A++LA A +KRLK + + ++ P+ GQG+I I+ +
Sbjct: 131 CKGNIHSRLKKLNQGVFDALILATAALKRLKINEQMYTPIDPSYLLPAMGQGSIAIQCRL 190
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLAS 268
+ K ++V+ IN++ T +N E+ ++ L C+ I +A + +T++ +V +
Sbjct: 191 YDNKIIDIVRNINNKKTALCINSEKIVVSMLGTGCRVPIGSYAKIENKNTIWIRALVGSI 250
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
DG +A + + + + + KN+
Sbjct: 251 DGSNIIRSEGKSCVSNAEKLSKKQVKNLINLGAKNIL 287
>gi|156937477|ref|YP_001435273.1| porphobilinogen deaminase [Ignicoccus hospitalis KIN4/I]
gi|166217774|sp|A8AAB4|HEM3_IGNH4 RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|156566461|gb|ABU81866.1| hydroxymethylbilane synthase [Ignicoccus hospitalis KIN4/I]
Length = 304
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 152/299 (50%), Gaps = 11/299 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT---LTEIGGK 61
+I R S L+L S L + P +I + T GD+ N L + G
Sbjct: 2 KIKIAARGSKLSLKQVSMFTSYL--LKFFPDLEYEVITVKTTGDK-ANAPFEELAKRGLT 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120
GLF +E+ K ++ G+ D AVHS KD+PT+L L+I+A+LPR+ DV IS + D
Sbjct: 59 GLFEKEVNKAVLEGKADVAVHSLKDLPTELDPRLEIAAFLPRDPPYDVLISRAGNYDIFD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSS RRKAL+ R D+ V D RG ++TRL KL + AI+LA AG+ RL
Sbjct: 119 LPKGSVVGTSSARRKALIKNLRPDLVVKDLRGNVDTRLEKLRRGEYDAIVLAEAGVSRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V L+ FPPSPGQG I T + + +L+K I+ + ER L E
Sbjct: 179 L-NVDYVRLDWRLFPPSPGQGIIVAVTRKGS-EISDLLKSISDVKSEKLATAERTVLKEF 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C A+ A+ +GS + VL+ G+ +V G +G AA+ ++ +
Sbjct: 237 GGGCFVALGAIAFEEGSLIRLRATVLSPSGRERVDVELIGKG--PEEVGMRAAERLKAL 293
>gi|225684419|gb|EEH22703.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb03]
Length = 347
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 143/314 (45%), Gaps = 19/314 (6%)
Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
R S LAL RSSL P + + T GD L E K L+TEE+E+
Sbjct: 26 RKSKLALLQTDLIRSSLKAA--WPEYEFRVHSQDTAGDLNKVTPLREFTTKNLWTEELEE 83
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKDLALHSVI 127
L++ +ID VHS KD+PT+L K + A +PRED RDV + +L +L SV+
Sbjct: 84 LLVAKKIDFVVHSLKDVPTQLPKPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVV 143
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVI 185
GTSS+RR A L R + D RG IETRL KL+ + I+LA AG+ R + I
Sbjct: 144 GTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARI 203
Query: 186 KEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L+ ++ + GQGA+ +E ++ + + +++ I + ER+ L L+G
Sbjct: 204 SHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGG 263
Query: 244 CKSAIAGFAYCKGST-------LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293
C + + L IV + DGK EV + +A G+ A
Sbjct: 264 CSAPLGVETEWVKGEGQGEVEKLRLRAIVASVDGKEAVEVEMEAEIRSEAEAEGFGKTVA 323
Query: 294 QYIRFISNKNVFNF 307
+ + +
Sbjct: 324 EELIVKGAGKILEV 337
>gi|170096450|ref|XP_001879445.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645813|gb|EDR10060.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 340
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 12/314 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K IG R S LA A RS L + P I I +TE GG
Sbjct: 15 EQKAIVIGCRPSTLAKIQAELVRSRLKVL--FPASRFEISSKKFPQPEIGTSQITERGGA 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
L+T E+E L G+ID VHS KD+PTKL +G +I L RED RD + ++L
Sbjct: 73 SLWTTELEDALFDGDIDILVHSLKDVPTKLKEGCEIIHVLEREDRRDCLVVKDGLPYRTL 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
++L SV+GT S+RR A + R + + D RG I+TRL KL++ A++LA AG+
Sbjct: 133 EELPAGSVVGTGSVRRVAQMKRRYPLLVIKDVRGNIDTRLQKLDSPDLPYTALILASAGL 192
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL I L+ P+ GQG + E + K + +V + +V ERA
Sbjct: 193 LRLSLHDRITSYLSPPISYPAVGQGCLGAEFRSADTKVKAMVSRLEVWQDGWAVRAERAL 252
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGI--VLASDGKIFHEVSRNG---NRCDAINIGRD 291
L L+G C + ++ G + + + + DG V G + + + +G+
Sbjct: 253 LWVLEGGCAFPVGIWSSWSGDNIASESLSVMTSPDGSEEITVETTGVVASVEEVLELGKQ 312
Query: 292 AAQYIRFISNKNVF 305
AA+ + + +
Sbjct: 313 AARSLLEKGGRGII 326
>gi|296282337|ref|ZP_06860335.1| porphobilinogen deaminase [Citromicrobium bathyomarinum JL354]
Length = 292
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 4/288 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD++ +R L ++GGK L+T E++ L G
Sbjct: 1 MAQAHETRARLCAAHGWDESAVELVPVVAGGDKVQDRPLADVGGKALWTRELDAWLDEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T + + ++A LPR D RDV + A SL+ + + +GTS+ RR A
Sbjct: 61 IDAAVHSLKDVETIRPEWITLAAILPRADRRDVLLG--ASSLRSIPQGATLGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+ R DI + FRG + TR+ KL +A LLA AG++RL +E V L +E + P
Sbjct: 119 QMKNLRPDIETVLFRGNVATRMAKLQAGEADVTLLAAAGLERLGQESVGT-PLPLETWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+P QGAI IE + + + +N T V ERA L L GSC S +
Sbjct: 178 APSQGAIGIECRTEDSVTRGHLDALNDAPTRREVEAERALLEALGGSCHSPVGVLVENAD 237
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
L+ + ++DG + S + D I R A + + +
Sbjct: 238 EGLHMRAALFSADGAERVDGSSDLTPGDDEAI-RAFAADLLARATPGI 284
>gi|126640355|ref|YP_001083339.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978]
Length = 226
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 73/222 (32%), Positives = 121/222 (54%)
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KD+P L +GL ++ RED D F+S+ + DL + +GTSSLRRK+ +L+ R
Sbjct: 1 MKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVGTSSLRRKSQILKQRP 60
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
D+ +ID RG + TRL KL++ + AI+LA AG+KRL + I+ + P+ GQGA+
Sbjct: 61 DLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAERIRHCIEPSVSLPAVGQGAL 120
Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263
+E ++ + L++ + H +T V ERAF A L+G C+ IAG+A + ++ G
Sbjct: 121 GLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGGCQVPIAGYATLQDGKIHIEG 180
Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
V + DG+ +A +G + A+ + ++
Sbjct: 181 RVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGDLL 222
>gi|119713318|gb|ABL97382.1| porphobilinogen deaminase [uncultured marine bacterium EB80_02D08]
Length = 300
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/301 (32%), Positives = 143/301 (47%), Gaps = 4/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR S LA+ A + + K + +IP++++GD+ TN+ L EIGGKGLF
Sbjct: 2 KIKIATRQSELAMYQANFVANEIKKSIK--DVEVELIPMTSEGDQ-TNKPLHEIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E L S ++D AVHS KD+P +L +I RE D+ +S +S D +
Sbjct: 59 ISTLESALESNKVDIAVHSLKDVPARLDPKFKIINVFKRESPSDLLLSKDGKSFSDFLEN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTS RRKA + R DI I RG I TR+NKLN +++A A I RL ++
Sbjct: 119 ATIGTSGPRRKAQINYLRPDIKTIPVRGNIATRINKLNEGYFDGLVVAKAAINRLGLQQN 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E +I++ P+ QG I E +N + E ++ I N ER+F+A +DG C
Sbjct: 179 SYE-FSIDEMLPAASQGHIATECLSSNKEIIETLESIGDSKELILANAERSFVASMDGGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
S IA + G VL+ G N + D A K++
Sbjct: 238 LSPIAILCQNFNDEIKVIGKVLSYKGDKLIYKKMNSSFKDIDKDIISFADEFILEGAKSL 297
Query: 305 F 305
Sbjct: 298 I 298
>gi|50841792|ref|YP_055019.1| porphobilinogen deaminase [Propionibacterium acnes KPA171202]
gi|289424694|ref|ZP_06426477.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187]
gi|289428901|ref|ZP_06430581.1| hydroxymethylbilane synthase [Propionibacterium acnes J165]
gi|295129869|ref|YP_003580532.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137]
gi|50839394|gb|AAT82061.1| porphobilinogen deaminase, HemC [Propionibacterium acnes KPA171202]
gi|289155391|gb|EFD04073.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187]
gi|289157902|gb|EFD06125.1| hydroxymethylbilane synthase [Propionibacterium acnes J165]
gi|291376805|gb|ADE00660.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137]
Length = 366
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 91/329 (27%), Positives = 141/329 (42%), Gaps = 32/329 (9%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ + ++T GD + +L +GG G+F
Sbjct: 36 IRLGTRASTLATTQSEMVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFA 90
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL +
Sbjct: 91 SAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEA 150
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------NKAHAILLAYAG 175
+GT S RR A LL R D++++D RG ++TRL ++ A++LA +G
Sbjct: 151 SVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASG 210
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232
+ RL + E L+ P+P QGA+ +E + + + + I+ T +
Sbjct: 211 LARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATA 270
Query: 233 ERAFLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHE--------VSR 278
ERA L+ L+ C + I A K L +V A DG
Sbjct: 271 ERAVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEV 330
Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307
A +G AA+ + +V +
Sbjct: 331 EPALAAAHTLGVTAAEELLDDGAADVADL 359
>gi|144479|gb|AAA23113.1| porphobilinogen deaminase [Prosthecochloris vibrioformis]
Length = 279
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 94/276 (34%), Positives = 140/276 (50%), Gaps = 12/276 (4%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT----KLL 92
NI + + T GD + + L++IG GLFT++IEK L++GEID AVHS KD+PT L
Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEIDLAVHSLKDVPTVRRKAWL 61
Query: 93 KGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRG 152
S PR R F + + + + TSSLRR + LL R D+ ++D RG
Sbjct: 62 SPRSPSVKTPR---RHHFQVRQG--VDGPSAEAKMATSSLRRMSQLLSLRPDLEIMDIRG 116
Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212
+ TR K + A++LAYAG+ RL+ I EIL E P+ GQGA+ IET ++
Sbjct: 117 NLNTRFKKFDEGDFDAMMLAYAGVYRLEFSDRITEILPHETMLPAVGQGALGIETRTDDA 176
Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+ +E+V+V+N ++T ERA L L G C+ I F TL V + DGK
Sbjct: 177 ETREIVRVLNDDNTEMCCRAERALLRHLQGGCQIPIGSFGSYIDGTLKLLAFVGSVDGKT 236
Query: 273 FHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVF 305
+A +G + A+ + + + +
Sbjct: 237 GLRNEVTKAVKTPEEAEAVGIELAEILLSMGAEKIL 272
>gi|39934577|ref|NP_946853.1| porphobilinogen deaminase [Rhodopseudomonas palustris CGA009]
gi|39648426|emb|CAE26947.1| putative porphobilinogen deaminase [Rhodopseudomonas palustris
CGA009]
Length = 327
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 147/324 (45%), Gaps = 20/324 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K P RIGTR S +ALA + L + II T GD L GG
Sbjct: 1 MVKFPVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGG 58
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L
Sbjct: 59 KGGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTL 118
Query: 119 KDLAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163
++L IGT+++RR A R ++ VI FRG ++R+ KL+N
Sbjct: 119 EELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSE 178
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I+
Sbjct: 179 VGPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALID 238
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ + + ER L L+G C S IA + G + VL +G +F E +R G
Sbjct: 239 NHQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPA 298
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+GR + V
Sbjct: 299 NRPRELGRTVGLELLDKGAAAVIE 322
>gi|15678894|ref|NP_276011.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|11386772|sp|O26960|HEM3_METTH RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|2621967|gb|AAB85372.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 289
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LAL L +V K +I KGDRI + L + +GLFT E+
Sbjct: 4 GTRGSRLALVQTNHVIEMLSEVCKEKIEKKIIKT---KGDRIRDSQLYSMDSRGLFTREL 60
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ +++ E+D AVHS KD+P+ L L I+A PRE +V +S +DL S +G
Sbjct: 61 DMAVLNEEVDLAVHSLKDVPSDLDPDLAIAAVPPRESPAEVLVSR--LDWEDLPQGSKLG 118
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSSLRR+A + + + RG I+TR+ K+ + + HA ++A AG+KRL E+ IK
Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMDGEVHATIMAEAGLKRLGLEEHIKRR 178
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
+E F P+ GQGA+ + T + + + I H + V E+ L EL C+ +
Sbjct: 179 FPVEYFTPAAGQGALAVITRA-DSELISSIGRITHHPSLQEVTAEKTLLRELGAGCQCPL 237
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G+ L Y ++L +G++ +V+ G +A +IG+ AA+ +
Sbjct: 238 GVIGRATGNQLTLYAVLLTREGEMLRKVTVRGPLAEAEDIGKKAAKEM 285
>gi|283457696|ref|YP_003362282.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18]
gi|283133697|dbj|BAI64462.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18]
Length = 454
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 95/372 (25%), Positives = 158/372 (42%), Gaps = 69/372 (18%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSL-------MDVHKIPPHNIV---IIPLSTKGDRI 50
M + +GTR S LAL + ++ H +V + + T+GD +
Sbjct: 78 MSHHEYILGTRGSALALTQSRIAAETVTSLYTEHQAHHGAADAEVVDFTLRTVKTEGD-V 136
Query: 51 TNRTLTEIGGKGLFTEEIEKKLISG-------EIDCAVHSAKDMPTKLLKGLQISAYLPR 103
L +GG G+F + ++L+ G +D AVHS KD+P+ GL I+A L R
Sbjct: 137 LTGPLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVIAATLKR 196
Query: 104 EDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-- 161
ED RD ++ +L L S +GT S RR A L R D+ ++D RG + TR+ ++
Sbjct: 197 EDPRDALVARDGLTLDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDIRGNVGTRIGRVKG 256
Query: 162 ----------------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
+ A++LA +G+KRL KE++I E L+
Sbjct: 257 LEEHAGKQVVLRQNTETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDPTR 316
Query: 194 FPPSPGQGAICIETHVN-----------NPKAQELVKVI-------NHEDTWDSVNCERA 235
P+PGQGA+ +E + +P+ V+ + NH +T +V+ ERA
Sbjct: 317 MLPAPGQGALALEVRESEFENPDPAVLADPEVARPVRALGRALLAANHHETRLAVSAERA 376
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292
L L+ C + I +A+ L +V + DG + + A +G
Sbjct: 377 LLRRLEAGCAAPIGAYAHVVEGDLVLSVVVASPDGTDMLRHTSATAELDVPGAERLGVRV 436
Query: 293 AQYIRFISNKNV 304
A+ + + +
Sbjct: 437 AEDLLQMGAAAL 448
>gi|255324252|ref|ZP_05365374.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum
SK141]
gi|311740973|ref|ZP_07714798.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298768|gb|EET78063.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum
SK141]
gi|311303775|gb|EFQ79853.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 295
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 91/301 (30%), Positives = 140/301 (46%), Gaps = 8/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA A R L+D + + ++T GD N E G G+FT
Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDA----GFDSQLHIVTTAGDV--NMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + L +GE D AVHS KD+PT R+D R+ ++ SL L +
Sbjct: 56 QALREALYAGECDIAVHSFKDLPTA-PDERFRLVVPQRQDSREALVARDGLSLAQLPQGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG I+TR++K+ + + A+LLAYAG+ R
Sbjct: 115 RVGTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVLLAYAGLLRGGYADRA 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
EI F P+P QGA+ IE +A + I + + ERA LA L+ C
Sbjct: 175 TEIFEPSVFMPAPAQGALAIEAVAG-TEAAAALDAIVDDRASAAAAGERAVLARLEAGCT 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + G L G V A DG + +G+ +A ++G + + +
Sbjct: 234 APVAATSRWDGDQLTVRGGVFALDGSRQLTATASGSAAEAADLGARISDELFAGGAAELL 293
Query: 306 N 306
Sbjct: 294 G 294
>gi|269837831|ref|YP_003320059.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745]
gi|269787094|gb|ACZ39237.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745]
Length = 311
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 3/299 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P ++ +ST GDR LT IGG+G+F
Sbjct: 11 VRLGTRGSALAREQTRRVMAALAALR--PDLELIETIVSTAGDRDKRTPLTVIGGQGVFA 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ L++G +D AVHSAKD+PT+ + GL I A+ RED RDV +S +SL DL +
Sbjct: 69 RELQTALLAGTVDVAVHSAKDLPTEPVPGLVIGAFFSREDARDVLVSRDGRSLADLPPGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS RR L R R D+ +D RG ++TRL K+ + A +LA AG+ R+ ++ I
Sbjct: 129 RVGTSSRRRLVALRRLRPDLEAVDLRGNLDTRLRKVREGEVDAAILAAAGLLRMGWQEHI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+++DF P+PGQGA+ IE ++P E++ +N + ER+FL L G C+
Sbjct: 189 TEFLSLDDFVPAPGQGALAIECRADDPAVNEMLAALNDPAAALAARTERSFLRALGGGCR 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303
S I A G T+ ++ + +A A + R ++ +
Sbjct: 249 SPIGAHATVSGDTVTLRVMLGDEAMTRVRLSTWTLPAAEAETRAGALAVEVQRSLAGAD 307
>gi|296115106|ref|ZP_06833747.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769]
gi|295978207|gb|EFG84944.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769]
Length = 358
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 162/316 (51%), Gaps = 15/316 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62
P ++GTR SPLAL + L + +ST GD++ NR L EIGGKG
Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQISTTGDQVLNRKLAEIGGKG 100
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120
LF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I D
Sbjct: 101 LFAKEIHEALLDGRIDFAVHSLKDLETALPPGLVLACTLRREDARDVLILGPDCPTPDPM 160
Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
LA +++G +S+RR+A +L R D+ RG ++TRL+KL + A LLA AG
Sbjct: 161 DPYSALAPGALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCEATLLALAG 220
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
++RL E IL+ P+ GQG + + ++ + +EL+ I + ERA
Sbjct: 221 LRRLGMEDRADVILDPTVMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVATAERA 280
Query: 236 FLAELDGSCKSAIAGFAY----CKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LAELDGSC++ I G+A G L+ G+V DG + S +G DA +G
Sbjct: 281 LLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPSDAARLG 340
Query: 290 RDAAQYIRFISNKNVF 305
+ +R S ++F
Sbjct: 341 HALGRSLRADSPSDIF 356
>gi|149186168|ref|ZP_01864482.1| porphobilinogen deaminase [Erythrobacter sp. SD-21]
gi|148830199|gb|EDL48636.1| porphobilinogen deaminase [Erythrobacter sp. SD-21]
Length = 292
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 4/288 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD++ +R L +IGGK L+T E++ L G
Sbjct: 1 MAQAHETRARLCAAHSWDEARVELVPVIASGDKVQDRPLADIGGKALWTRELDIWLAEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T G+ I+A LPRED DV + A SL+ + + +GTS+ RR A
Sbjct: 61 IDAAVHSMKDVETIRPDGIAIAAILPREDKADVLLG--ATSLEAIPQGAKVGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D+ V+ RG + TR+ KL +A A LA AG+ RL EK + L ED+ P
Sbjct: 119 QLLYARPDLEVVGIRGNVATRMAKLQAGEADATFLAAAGLVRLG-EKSVGVRLEPEDWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+P Q AI IE ++ +AQE++ I+H + + V ERA L L G+C S IA +G
Sbjct: 178 APAQAAIGIECRASDERAQEVLAAIDHAHSREEVFAERALLEGLGGTCHSPIAALTRREG 237
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
L + + DG I D + R A + + +V
Sbjct: 238 DALRMTAAIYSPDGAIRIAREARFEPGD-LAAPRQLAHELLGEAPDHV 284
>gi|312127739|ref|YP_003992613.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108]
gi|311777758|gb|ADQ07244.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108]
Length = 290
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 96/293 (32%), Positives = 150/293 (51%), Gaps = 6/293 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIG R S L+ + +P+ TKGD ++L + G+
Sbjct: 2 KKLRIGARDSRLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ EID AVHS KD+P ++ +I A + RED RDV +S L
Sbjct: 59 FVKEIERALLTREIDLAVHSLKDLPCEIDSNFEIVAVVEREDPRDVLVSKDGVGFYQLKP 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + +++AYA +KRL +
Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVIVAYAALKRLNLDS 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ I +I + P PGQGAICIE ++P + ++ IN + + ER L L G
Sbjct: 179 YVSYIFDINEITPCPGQGAICIECLKDSPY-KSILSKINDVNAYIQTQFERLVLKFLGGG 237
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C S+I F +Y + +L D + S G++ D +++ ++ +
Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGD--KLVKASIEGDKADFLSLANKLSKML 288
>gi|9971935|gb|AAG10497.1|AF279106_59 predicted porphobilinogen deaminase [uncultured marine gamma
proteobacterium EBAC31A08]
Length = 303
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 151/302 (50%), Gaps = 6/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LA+ A L+ KI + ++P++++GD+ T++ L EIGGKGLF
Sbjct: 2 KIRIATRQSELAMYQAKFVADELLA--KINNIKVELVPMTSEGDQ-TDKPLHEIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E L + E D AVHS KD+P KL +I + RE D+ +S +S + A +
Sbjct: 59 ISTLESSLEADEADIAVHSLKDVPAKLDPKFKIISVFSRESPEDLLLSKDGKSFSEFARN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGTS RRKA + R DI I RG I TR+ KLN+ +++A A IKRL ++
Sbjct: 119 STIGTSGPRRKAQINNLRPDIKTIPVRGNIATRIKKLNDGLFDGLVVAKAAIKRLGLKQN 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E +IE+ PS QG I IE + EL++ I + ER+F+A ++G+C
Sbjct: 179 SYE-FSIEEMLPSASQGYIAIECLSDKKDIIELLENIGDPKELILASAERSFVAAMEGTC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA-AQYIRFISNKN 303
S IA K + G +L+ +G + + D I I A K+
Sbjct: 238 LSPIAILCEDKNGQIKISGKILSYEGNEKIYKEKISSFQD-IAIDIMLFADEFILEGAKS 296
Query: 304 VF 305
+
Sbjct: 297 LI 298
>gi|332668763|ref|YP_004451770.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484]
gi|332337800|gb|AEE44383.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484]
Length = 326
Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 90/288 (31%), Positives = 134/288 (46%), Gaps = 16/288 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LAL +L I + + T GDR +L +GG G+
Sbjct: 3 QQVRIGTRASTLALTQTGHVADALAAHG---GLAIETVRVRTDGDR-LTGSLASLGGAGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L+ G D AVHS KD+PT GL ++A PRED RD + +L DL
Sbjct: 59 FVTALRDALLDGRCDVAVHSLKDLPTADAPGLVLAAVPPREDPRDALCARDGLTLADLPR 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-----NKAHAILLAYAGIKR 178
+ +GT S RR A LL R D+ V+D RG ++TRL ++ A++LA AG+ R
Sbjct: 119 GARVGTGSPRRAAQLLAARPDLDVVDIRGNVDTRLGRVAGSPTGPGDLDAVVLARAGLAR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNN------PKAQELVKVINHEDTWDSVNC 232
+ + + + E+ + P+PGQGA+ +ET + ++ T +V
Sbjct: 179 IGRLEAVTELFGPDVMLPAPGQGALAVETRAAGLTTDLAGPLHAALAALDDRPTRLAVLA 238
Query: 233 ERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRN 279
ERA LA L+ C + + A TL +V+ +DG
Sbjct: 239 ERALLARLEAGCAAPVGTLATLDADGTLTLDAVVVRTDGTASLRRRAR 286
>gi|154508275|ref|ZP_02043917.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC
17982]
gi|153797909|gb|EDN80329.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC
17982]
Length = 344
Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats.
Identities = 96/335 (28%), Positives = 156/335 (46%), Gaps = 29/335 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEI 58
M + F +GTR S LALA + ++ + + + + T GD ++ L +
Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRVNLEVVRTHGD-VSAAPLAAL 59
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + +L
Sbjct: 60 GGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAADGATL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------------- 162
L +++GT S RR A +L R D+ V D RG + TRL+++
Sbjct: 120 ASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGADAGTAPSALG 179
Query: 163 -NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKV 220
+ A++LA AG++R+ + ++L+ P+ QGA+ IET ++P + L+
Sbjct: 180 TGERLDAVVLALAGLRRIGLDAHATDVLDPAIMMPAASQGALAIETRDEDDPLLRALLGT 239
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSR 278
+NH T + + ERA L+ L C + + FA S L V++ DG+ E S
Sbjct: 240 LNHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRERVEASG 299
Query: 279 NGNRCD------AINIGRDAAQYIRFISNKNVFNF 307
+ D A +G D + + V +
Sbjct: 300 SLALTDSVGLDEAARLGEDVVRQLLAGGAAEVTDL 334
>gi|288574447|ref|ZP_06392804.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570188|gb|EFC91745.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 454
Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats.
Identities = 101/291 (34%), Positives = 140/291 (48%), Gaps = 10/291 (3%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
+R S LA A E +L + I +ST GD + L+ GG G F + +E
Sbjct: 160 SRKSALARAQTMEAARALAKK----GLPVEIKTMSTCGDEKQDCHLSAFGGNGAFVKCLE 215
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+ ++ G+ D A+HS KD+P+ L GL++ A LPR DV +S+ L+ L +V+GT
Sbjct: 216 EAIMEGKGDGAIHSLKDVPSVLPDGLELVAVLPRASTSDVIVSNHKGGLEGLPAGAVVGT 275
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189
SSLRRKA L R D+ RG + TRL KL + A AI+LA AG+ RL L
Sbjct: 276 SSLRRKAQLAITRPDLDYTLIRGNVNTRLAKLQSGDADAIVLAKAGLDRLGISPEGATTL 335
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F P+P QG I +E + + E + INH TW ER L L C A
Sbjct: 336 P---FLPAPCQGIIAVEARSGS-RLAEEFRAINHRPTWLMALAERELLESLQVGCHVPFA 391
Query: 250 GFAYCKGSTLYFYGIVLASDGKIF-HEVS-RNGNRCDAINIGRDAAQYIRF 298
+ G L L+ DG+ E S + DA ++GRD A I+
Sbjct: 392 ALSEWVGGELRLRAQTLSYDGRHIDFEGSLAVRSDDDARDLGRDVALSIKA 442
>gi|162147854|ref|YP_001602315.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542474|ref|YP_002274703.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786431|emb|CAP56013.1| Porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530151|gb|ACI50088.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
Length = 367
Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats.
Identities = 111/320 (34%), Positives = 159/320 (49%), Gaps = 19/320 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62
P R+GTR SPLAL + L + ++T GD++ NR L EIGGKG
Sbjct: 46 PLRVGTRASPLALVQTRAFLTMLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIGGKG 105
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----- 117
LF +EI L G ID AVHS KD+ T L GL ++ L RED RD I
Sbjct: 106 LFAKEIHDALSDGRIDFAVHSLKDLETTLPPGLVLACTLRREDARDALILGPGAGGRHDA 165
Query: 118 ------LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171
L ++++G +S+RR+A +L R D+ RG ++TRL+KL + A LL
Sbjct: 166 ADAADPYAALPRNALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCDATLL 225
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++RL E +L+ E P+ GQG + + ++ + +EL+ I +
Sbjct: 226 ALAGLRRLGMEDRADIVLDPEIMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVAT 285
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDA 285
ERA LAELDGSC++ I G+A +L G+V DG + G R DA
Sbjct: 286 AERALLAELDGSCRTPIGGYARLVPGLAGAEASLRLTGLVAREDGSFLLRRTVTGLRADA 345
Query: 286 INIGRDAAQYIRFISNKNVF 305
+GR+ + +R S +VF
Sbjct: 346 EEMGRELGRSLRMDSPSDVF 365
>gi|255326986|ref|ZP_05368062.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296]
gi|255296203|gb|EET75544.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296]
Length = 377
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/372 (24%), Positives = 158/372 (42%), Gaps = 69/372 (18%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------KIPPHNIVIIPLSTKGDRI 50
M + +GTR S LAL + ++ ++ + + + T+GD +
Sbjct: 1 MSHHEYTLGTRGSALALTQSRIAAETVTSLYTEHQAHHGAENPEAVSFELRTVKTEGD-V 59
Query: 51 TNRTLTEIGGKGLFTEEIEKKLISG-------EIDCAVHSAKDMPTKLLKGLQISAYLPR 103
L +GG G+F + ++L+ G +D AVHS KD+P+ GL ++A L R
Sbjct: 60 LTGPLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVVAATLKR 119
Query: 104 EDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-- 161
ED RD ++ ++ L S +GT S RR A L R D+ ++D RG + TR+ ++
Sbjct: 120 EDPRDALVARDGLTVDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDVRGNVGTRIGRVKG 179
Query: 162 ----------------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
+ A++LA +G+KRL KE++I E L+
Sbjct: 180 LEEHAGKQVVLRQNAETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDPTR 239
Query: 194 FPPSPGQGAICIETHVN-----------NPKAQELVKVI-------NHEDTWDSVNCERA 235
P+PGQGA+ +E + +P+ V+ + NH +T +V+ ERA
Sbjct: 240 MLPAPGQGALALEVRESEFENPDSAVLADPEVARPVRALGRALLAANHHETRLAVSAERA 299
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292
L L+ C + I +A+ L +V + DG + + A +G
Sbjct: 300 LLRRLEAGCAAPIGAYAHVVEGDLVLNVVVASPDGTDMLRHTSATAELDVPGAERLGVRV 359
Query: 293 AQYIRFISNKNV 304
A+ + + +
Sbjct: 360 AEDLLQMGAAAL 371
>gi|311111780|ref|YP_003983002.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931]
gi|310943274|gb|ADP39568.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931]
Length = 371
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 98/363 (26%), Positives = 149/363 (41%), Gaps = 64/363 (17%)
Query: 5 PFRIGTRCSPLALAH----AFETRSSL----MDVHKIPPHNIVIIPLSTKGDRITNRTLT 56
P+ +GTR S LAL A + + I + T GD + L
Sbjct: 4 PYILGTRGSALALTQSTLAAEHIVQMFNAHSREHGAERTLSFDITTVKTDGD-VLTGPLA 62
Query: 57 EIGGKGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
+GG G+F + ++L+ G+ +D AVHS KD+P + GL I+A L RED RD ++
Sbjct: 63 TLGGTGVFAAALRQRLLDGDTPDGVDVAVHSLKDLPAEPCPGLVIAAILEREDPRDALVA 122
Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------- 161
+L L + +GT S RR A + R D+ ++D RG + TR+ ++
Sbjct: 123 RDNLTLDTLPTGARVGTGSPRRAAQVHALRPDLEIVDIRGNVGTRIARVKGLEEHGNRQV 182
Query: 162 -------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202
N A++LA +G+KRL KE VI E L+ P+PGQGA
Sbjct: 183 IVRDSAETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPAPGQGA 242
Query: 203 ICIETHV---NNPKAQEL---------------VKVINHEDTWDSVNCERAFLAELDGSC 244
+ IE NP L + +H +T V ER L L+ C
Sbjct: 243 LAIEVRETEFANPDTATLFNSEISQPVRTLGEALIAADHFETHLEVTAERRLLRRLEAGC 302
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-VSRNG--NRCDAINIGRDAAQYIRFISN 301
+ I +A K L +V + DG S G + A +G A+ + +
Sbjct: 303 AAPIGAYATVKDGDLVLTAVVASPDGTESLRHTSATGELDVPGAERLGIRVAEDLLQMGA 362
Query: 302 KNV 304
+
Sbjct: 363 AAL 365
>gi|297159419|gb|ADI09131.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1]
Length = 345
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 19/315 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + ++ V P + ++ ++T+GD ++ L +IGG G+F
Sbjct: 29 PLRLGTRRSALAMAQSGQIADAVRRVTGRP---VELVEITTRGD-VSREDLAQIGGTGVF 84
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GEID AVHS KD+PT L ++A RED RD I+ + +L
Sbjct: 85 ATALREALLRGEIDFAVHSLKDLPTAQPDDLVLAALPAREDPRDALIARDGLTFAELPPG 144
Query: 125 SVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR + L W I + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 145 ARIGTGSPRRTSQLRAWARSLGLRIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLARLG 204
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ EIL+ + P+PGQGA+ +E N + ++ T +V ER+ LA L
Sbjct: 205 RLDEATEILDADHILPAPGQGALAVECAAANAALAAQLAELDDPLTRVAVTAERSLLAAL 264
Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR-----CDAINI-G 289
+ C + + A G + G+V +DG ++S G +A + G
Sbjct: 265 EAGCSAPVGALADLLGDGQAVTEMRLRGVVGTTDGSSLVQLSITGPVPTAPGEEAAQLMG 324
Query: 290 RDAAQYIRFISNKNV 304
+ A + +
Sbjct: 325 HELAAEMLAKGAAGL 339
>gi|282853361|ref|ZP_06262698.1| hydroxymethylbilane synthase [Propionibacterium acnes J139]
gi|282582814|gb|EFB88194.1| hydroxymethylbilane synthase [Propionibacterium acnes J139]
Length = 334
Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 90/329 (27%), Positives = 141/329 (42%), Gaps = 32/329 (9%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ + ++T GD + +L +GG G+F
Sbjct: 4 IRLGTRASTLATTQSEMVARLLRS----EGLDVDLTTITTHGDT-STASLAAMGGIGVFA 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL +
Sbjct: 59 SAIRATLLKGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------NKAHAILLAYAG 175
+GT S RR A LL R D++++D RG ++TRL ++ A++LA +G
Sbjct: 119 SVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232
+ RL + E L+ P+P QGA+ +E + + + + I+ T +
Sbjct: 179 LARLGHSGTVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATA 238
Query: 233 ERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSR 278
ERA L+ L+ C + I A K L +V DG
Sbjct: 239 ERAVLSHLEAGCAAPIGALAQLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEV 298
Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307
+ A +G AA+ + +V +
Sbjct: 299 DSALAAAHTLGVTAAEELLDDGAADVADL 327
>gi|55976374|sp|Q6AB05|HEM3_PROAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|313772844|gb|EFS38810.1| porphobilinogen deaminase [Propionibacterium acnes HL074PA1]
gi|313802779|gb|EFS43997.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA2]
gi|313806434|gb|EFS44941.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA2]
gi|313810983|gb|EFS48697.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA1]
gi|313815286|gb|EFS53000.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA1]
gi|313817301|gb|EFS55015.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA2]
gi|313824153|gb|EFS61867.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA2]
gi|313826520|gb|EFS64234.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA1]
gi|313828701|gb|EFS66415.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA2]
gi|313831749|gb|EFS69463.1| porphobilinogen deaminase [Propionibacterium acnes HL007PA1]
gi|313840063|gb|EFS77777.1| porphobilinogen deaminase [Propionibacterium acnes HL086PA1]
gi|314916105|gb|EFS79936.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA4]
gi|314917026|gb|EFS80857.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA1]
gi|314921302|gb|EFS85133.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA3]
gi|314955012|gb|EFS99418.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA1]
gi|314959051|gb|EFT03153.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA1]
gi|314961324|gb|EFT05425.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA2]
gi|314977093|gb|EFT21188.1| porphobilinogen deaminase [Propionibacterium acnes HL045PA1]
gi|314989126|gb|EFT33217.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA3]
gi|315078439|gb|EFT50470.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA2]
gi|315082761|gb|EFT54737.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA2]
gi|315086120|gb|EFT58096.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA3]
gi|315087704|gb|EFT59680.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA1]
gi|315102048|gb|EFT74024.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA1]
gi|327331372|gb|EGE73111.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA2]
gi|327333359|gb|EGE75079.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA3]
gi|327334882|gb|EGE76593.1| hydroxymethylbilane synthase [Propionibacterium acnes HL097PA1]
gi|327449721|gb|EGE96375.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA2]
gi|327454571|gb|EGF01226.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA3]
gi|327456643|gb|EGF03298.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA2]
gi|328755626|gb|EGF69242.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA1]
gi|328756706|gb|EGF70322.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA2]
gi|328761895|gb|EGF75405.1| hydroxymethylbilane synthase [Propionibacterium acnes HL099PA1]
gi|332674709|gb|AEE71525.1| porphobilinogen deaminase [Propionibacterium acnes 266]
Length = 334
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 91/329 (27%), Positives = 141/329 (42%), Gaps = 32/329 (9%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L ++ + ++T GD + +L +GG G+F
Sbjct: 4 IRLGTRASTLATTQSEMVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFA 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL +
Sbjct: 59 SAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------NKAHAILLAYAG 175
+GT S RR A LL R D++++D RG ++TRL ++ A++LA +G
Sbjct: 119 SVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232
+ RL + E L+ P+P QGA+ +E + + + + I+ T +
Sbjct: 179 LARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATA 238
Query: 233 ERAFLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHE--------VSR 278
ERA L+ L+ C + I A K L +V A DG
Sbjct: 239 ERAVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEV 298
Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307
A +G AA+ + +V +
Sbjct: 299 EPALAAAHTLGVTAAEELLDDGAADVADL 327
>gi|192290090|ref|YP_001990695.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1]
gi|192283839|gb|ACF00220.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1]
Length = 326
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 20/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63
P RIGTR S +ALA + L + II T GD L GGKG
Sbjct: 4 PVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGGKGGA 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L++L
Sbjct: 62 FVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLEELK 121
Query: 123 L----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166
IGT+++RR A R ++ VI FRG ++R+ KL+N A
Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSEVGPA 181
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++ +
Sbjct: 182 DALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDNHQS 241
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
+ ER L L+G C S IA + G + VL +G +F E +R G
Sbjct: 242 RLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPANRPR 301
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GR + V
Sbjct: 302 ELGRTVGLELLDKGAAAVIE 321
>gi|90422760|ref|YP_531130.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB18]
gi|90104774|gb|ABD86811.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB18]
Length = 326
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 20/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63
P RIGTR S +ALA + L ++ I+ T GD L GGKG
Sbjct: 4 PVRIGTRKSIMALAQTEDIARRLSAAAS--ELDVEIVKFETVGDSDQVSKLLPHGGKGGA 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
F EI + +G+++ +HS KDMP + GL I A L R+ D + +L+DL
Sbjct: 62 FVAEIRAAVTAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPPTDALVLRKGLTLEDLR 121
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166
IGT+++RR A R +++VI FRG +TR+ KL+N A
Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRVRKLDNAEKQRLPDGGHVGPA 181
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A+++A +G++R+ I ++ PS GQG + +E VNN + ++ +++I+
Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVNNWQIRKYLELIDDPVA 241
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
S + ER L L+G C S +A F+ KGS + VL +G +F E SR+G
Sbjct: 242 RLSCDAEREVLWVLNGHCNSPMAAFSTIKGSEMTLSASVLDEEGGLFIEASRSGPANRPR 301
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GR A + +
Sbjct: 302 ELGRAVALELLDKGAAAIIE 321
>gi|297516477|ref|ZP_06934863.1| porphobilinogen deaminase [Escherichia coli OP50]
Length = 221
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 108/208 (51%)
Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
RED RD F+S+ +L L S++GTSSLRR+ L R D+ + RG + TR
Sbjct: 4 VTICEREDPRDAFVSNNYDNLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 63
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL
Sbjct: 64 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTREL 123
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 124 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 183
Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 184 RRGAPQDAEQMGISLAEELLNNGAREIL 211
>gi|300770169|ref|ZP_07080048.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC
33861]
gi|300762645|gb|EFK59462.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC
33861]
Length = 528
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 145/314 (46%), Gaps = 27/314 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K IGTR S LA+ A + L + + + T+GD I + L ++ G
Sbjct: 1 MNRK-LIIGTRGSQLAMWQANHIKDRLAAA----GIDSELKVIKTQGDIIQHLRLDKLEG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----Q 116
KG FT+E+E++L+S ID AVHS KD+PT GL I+A RE ++ I +
Sbjct: 56 KGFFTKELEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLIVLKDCVDIK 115
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG+
Sbjct: 116 KRLSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGV 175
Query: 177 KR--LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+R + + E + + P+P QG + I+ ++ + E ++VI++++ + + ER
Sbjct: 176 ERIDMDLSEFYVEEIPPVELIPAPAQGVLAIQIRESDQELYEALQVIHNKEVAEVIAVER 235
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA-----SDGKIFHEVSRNGNRCDAINIG 289
L D C + + + + V D S G
Sbjct: 236 KVLNLFDAGCHAPLGCYCRKSEGKYEAWTSVADTSDEFPDRLYIQRDSTEG--------- 286
Query: 290 RDAAQYIRFISNKN 303
A+ I K+
Sbjct: 287 --MAEEIFAKFAKD 298
>gi|168334266|ref|ZP_02692463.1| uroporphyrinogen III synthase/methyltransferase [Epulopiscium sp.
'N.t. morphotype B']
Length = 785
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 11/300 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F +GTR S LA+A + + + + P I + TKGD IT L +IG KGLF
Sbjct: 4 TFTVGTRGSALAIAQTKQIIALMQQ--QNPDATFSIKIIQTKGDAITEIPLDKIGDKGLF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLA 122
EIE +L+SG+ID A+HS KD+P+ + GL I+ R +D + SL +
Sbjct: 62 VSEIEHQLLSGQIDIAIHSYKDLPSNITPGLIIAHPPARAPRQDALVLRDGTISSLDAIP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ I T SLRRK LL R D++V+ RG I+TRL KL + I++A AG+ RL
Sbjct: 122 RNATIATGSLRRKLQLLHHRPDLNVVPIRGNIDTRLKKL--SDVDGIVIAAAGLARLDLA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + + P+ QGAI I+ + A I+ T V+ ERAFL+ +DG
Sbjct: 180 HKISYLFPEDILVPAAAQGAIAIQCRATDTTAIACANSISDSTTALEVSAERAFLSAIDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299
SC + A+ T+Y I + F S + A +G A+ +
Sbjct: 240 SCHIPVGATAHLIDDTMYLKAIFGNT--TTFITHSAEAHVTTEIQAQALGIATARSVLAQ 297
>gi|91978235|ref|YP_570894.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB5]
gi|91684691|gb|ABE40993.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB5]
Length = 330
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 148/322 (45%), Gaps = 20/322 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K P RIGTR S +ALA + L ++ I+ T GD L GGKG
Sbjct: 6 KIPVRIGTRKSVMALAQTEDIAKQLRAAAS--ELDVEIVKFETVGDSDQISKLLPHGGKG 63
Query: 63 -LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
F EI +I+G++ A+HS KDMP + GL I A L R+ D + +L++
Sbjct: 64 GAFVAEIRAAVIAGQLQAAMHSLKDMPGNEDTPGLVIGATLARDPATDALVLREGLTLEE 123
Query: 121 LAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------N 164
L IGT+++RR A R +++VI FRG +TR+ KL+
Sbjct: 124 LKKSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRIRKLDAREKQRLPDGGEVG 183
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
A A+++A AG++R+ I ++ PS GQG + +E V++ + + + +I+
Sbjct: 184 PADALIMARAGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVDDWQTRRYLAMIDDP 243
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
+ + ER L L+G C S +A + G+ + + VL +G +F E +R+G
Sbjct: 244 KSRLCCDAEREVLWVLNGHCNSPMAAHSTVNGAEMTLHASVLDEEGGLFIETTRSGPANR 303
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
+GR + V
Sbjct: 304 PRELGRAVGLDLLDKGAAAVIE 325
>gi|146338934|ref|YP_001203982.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278]
gi|146191740|emb|CAL75745.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278]
Length = 325
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 146/324 (45%), Gaps = 22/324 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + FRIGTR S +ALA E L IP +I I+ T GD L GG
Sbjct: 1 MTR--FRIGTRKSTMALAQTEEIARRLQAA--IPSLDIEIVKFETTGDSDQTSKLLTHGG 56
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG F EI + ++ G++ A+HS KDMP + GL I+A L R+ DV + +L
Sbjct: 57 KGGAFVAEIRRAMLDGKLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRKGLAL 116
Query: 119 KDLAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--------- 165
+D IGT+++RR A R +I FRG +TR+ KL+N +
Sbjct: 117 EDFRKDGGRGFKIGTNAVRRAAYARRLFPHAELIHFRGAADTRIRKLDNGELQRMPDGGA 176
Query: 166 ---AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A +G++R+ + D P+ GQG + +E ++ + + ++ ++
Sbjct: 177 VGPADALIMARSGLERVGLSDRASHEFPVADMLPAVGQGIVAVECPASDFETRRILATVD 236
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ ER L L+G C S IAGF+ G+ + VL DG F E R G
Sbjct: 237 DAAARTCADAEREVLWVLNGHCNSPIAGFSTIDGAQMTLTASVLDEDGGRFIEAQRTGPA 296
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+GR + +
Sbjct: 297 DRPRELGRAVGLELLASGAAALIE 320
>gi|213583404|ref|ZP_03365230.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 206
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 118/202 (58%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERA 235
Q L+ +NH T V ERA
Sbjct: 185 TQALLAPLNHSQTALRVTAERA 206
>gi|332666630|ref|YP_004449418.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100]
gi|332335444|gb|AEE52545.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100]
Length = 300
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 17/305 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGK 61
+ RIGTR S LAL A TR L + + ++ + T GD + N + +I GK
Sbjct: 3 QTIRIGTRGSKLALWQAEFTREKLREA----GYASELVIIKTTGDNTQHLNLSFDKIEGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD- 120
G FT+EIE L+ G++D AVHS KDMPT GL ++A RED D + +SL++
Sbjct: 59 GFFTKEIEDALLRGDVDMAVHSMKDMPTSSPDGLVLTAVSYREDPADWLLVRK-ESLEEG 117
Query: 121 ----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + ++GTSS RRKA +L R D ++ D RG + TR++KL + AI+LA AG+
Sbjct: 118 QRFQLKQNPIVGTSSARRKAQILDLRPDATLKDIRGNVPTRVDKLLQGEFDAIMLAAAGL 177
Query: 177 KRLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL+ + V + +F P+P QG + + + ++ ++ ++H D N ER
Sbjct: 178 SRLELDLSAVHVVKFDPREFIPAPAQGVLAYQACTEDKVIRKALQHLHHSDVSLVTNIER 237
Query: 235 AFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
L ++G C+ + + + + + +V ++ + + A
Sbjct: 238 RILQLMEGGCQMPLGVYCEHDAAGNYHVWAAKADAWNAPVKKVRQSSSTS--YLLAEKVA 295
Query: 294 QYIRF 298
+ ++
Sbjct: 296 EELKK 300
>gi|84490120|ref|YP_448352.1| porphobilinogen deaminase [Methanosphaera stadtmanae DSM 3091]
gi|84373439|gb|ABC57709.1| HemC [Methanosphaera stadtmanae DSM 3091]
Length = 290
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA +L ++ + T GD+I N L I KG+FT
Sbjct: 1 MIVGTRGSKLATTQTKTVVKALEEITGEEIET---KIIKTTGDKIKNSQLYNIDAKGIFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ LI G ID AVHS KD+P++L L I+A RE I +V IS+ S +L ++
Sbjct: 58 KELDTALIDGSIDFAVHSFKDLPSELNDQLTITAIPQREAINEVLISN--YSWDELPENA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR+A I RG I+TR+ K+ + A ++A AGI RL ++ I
Sbjct: 116 TLGTSSVRREAFCKLHGKKIQTKPIRGNIDTRIRKVEEGEYDATIMALAGINRLGLQEHI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KE+ + + P GQGA+ + TH + + +++ +NHED+ E+A L + C+
Sbjct: 176 KEVFDEQYITPPAGQGALAVMTH-KDSEYNDVISKLNHEDSRIEAMTEKAILETIGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
I + G+ + + +L+ +GK+ +V++ ++ +AIN + +R
Sbjct: 235 WPIGIVSKVDGNNINIHCKLLSPEGKLLADVNKTTDKNNAINTAKVIGTKLRE 287
>gi|154283391|ref|XP_001542491.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1]
gi|150410671|gb|EDN06059.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1]
Length = 345
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 147/319 (46%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ L++ +ID VHS KD+PT++ K + A +PRED RDV + +L
Sbjct: 75 NLWTEELEELLLAKQIDLVVHSLKDVPTQIPKTCILGAMMPREDPRDVLVIKKGLPNMTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176
+L S++GTSS+RR A L R + D RG I+TRL KL + A++LA AG+
Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLAKLDAQDGPFSALILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + TL IV + DGK E+ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDADGKETLMLRAIVSSVDGKEAVEIEKYEKVTSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKKVADELVVLGAGRIL 333
>gi|50954011|ref|YP_061299.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|55976376|sp|Q6AHF1|HEM3_LEIXX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|50950493|gb|AAT88194.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 329
Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 17/312 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLA+A +++ +I ++ ++T GD + +L+E+GG G+F
Sbjct: 15 LRVGTRGSPLAVAQTQAVSAAVARATGF---DIELVTVTTHGDT-SRESLSELGGTGVFA 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L +GE D VHS KD+PT GL + A R D RD + +L +
Sbjct: 71 TALRDALRNGECDLVVHSLKDLPTAPAPGLVLGAVPKRADARDTLCARDGLRFGELPEGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L R + ++D RG ++TRL++++ A++LA AG+ RL +
Sbjct: 131 SVGTGSPRRAAQLRAQRPGLDIVDIRGNVDTRLSRVSAGDLDAVVLAAAGLGRLGRLDAA 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ P +PGQGA+ +E + + + ++H T + ERA LA L+
Sbjct: 191 TDFFSLSTMPTAPGQGALALEVREGDERGRGPIARALAAVDHATTCAATTAERAVLAGLE 250
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---------CDAINIGRDA 292
C + + A L+ V DG S A ++G
Sbjct: 251 AGCAAPVGATAMIDDGLLFLTATVYRPDGAAQLTASHAATPDSFGAAHLDEAARDVGERV 310
Query: 293 AQYIRFISNKNV 304
+ ++
Sbjct: 311 VAELLASGAADL 322
>gi|227538630|ref|ZP_03968679.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241549|gb|EEI91564.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC
33300]
Length = 528
Score = 268 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 16/295 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K IGTR S LA+ A + L + + + T+GD I + L ++ G
Sbjct: 1 MNRK-LIIGTRGSQLAMWQANHIKDRLAAA----GIDSELKVIKTQGDIIQHLRLDKLEG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----Q 116
KG FT+E+E++L+S ID AVHS KD+PT GL I+A RE ++ I +
Sbjct: 56 KGFFTKELEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLIVLKDCVDIK 115
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG+
Sbjct: 116 KRLSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGV 175
Query: 177 KR--LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+R + E + + P+P QG + I+ ++ + E ++VI++++ + + ER
Sbjct: 176 ERIDMDLSDFYVEEIPPVELIPAPAQGVLAIQIRESDQELFEALQVIHNKEVAEVIAVER 235
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA-----SDGKIFHEVSRNGNRCD 284
L D C + + + + V D S G +
Sbjct: 236 KVLNLFDAGCHAPLGCYCRKSEGKYEAWTSVAETSDEFPDRLYIQRDSTEGMAEE 290
>gi|226478112|emb|CAX72749.1| hydroxymethylbilane synthase [Schistosoma japonicum]
Length = 413
Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 27/301 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+G+R S LAL S L P ++ ++T GD I + L++IG K
Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L
Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164
DL + + +GTSS+RR A L+R + I RG + TRL KL+
Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
A++LA AG++R+ I ++L+ D + QGA+ E NN +L+ +I+ E
Sbjct: 184 SYDALILAKAGVERMGWVDRIDQVLS--DSFYAVSQGALACECLQNNTFIMDLLSLIHDE 241
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSR 278
+ + ER+ + +LDG C I+ + K S L + +L+ DG E S
Sbjct: 242 SSALTAIAERSLMHQLDGGCSIPISVRSDLTLKEDFKSSKLTLHANILSVDGVKSVERSA 301
Query: 279 N 279
+
Sbjct: 302 S 302
>gi|254796754|ref|YP_003081590.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois]
gi|254589999|gb|ACT69361.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois]
Length = 286
Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats.
Identities = 105/294 (35%), Positives = 159/294 (54%), Gaps = 11/294 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G RCS LALA A +L I ++ + T GD +++ LTE+GGK LF
Sbjct: 4 LKVGARCSTLALAQARLVERALAPY----CERIDLVGVRTSGDILSDIPLTEVGGKALFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L +
Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPSGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT + RR L + VI RG I TR+ K N I+LA+ G++RL K+I
Sbjct: 120 VIGTCAPRRVVQLNQRF---RVIPLRGNIATRVEKAKN--LDGIILAFCGLERLGLCKMI 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+++ + P QGA+C+E + +EL+ I+ +T ERAFL E++G CK
Sbjct: 175 SEVIHEDVMLPGVAQGALCVEFRKKDHFLRELILNISDRETIICTTAERAFLEEINGDCK 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+A+ A K +TLYF G++ + + S G+ +A IGR AA + +
Sbjct: 235 TALGALAVVKNNTLYFTGMLGKDNRPCYFRTS--GSCLNAKQIGRSAALALLRM 286
>gi|56552799|ref|YP_163638.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753474|ref|YP_003226367.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|56544373|gb|AAV90527.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552837|gb|ACV75783.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 308
Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 157/301 (52%), Gaps = 9/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+
Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I SL+ L
Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIGIP--SLEVLPYS 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GT+S RR A + R R DI + RG I+TRL KL N + A LLA AG+ RL + V
Sbjct: 122 GCVGTASPRRAAQIRRIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ ++ P+ GQGAI IE + A E V +I+H T +V ER L L+ C
Sbjct: 182 GY-DVPLDQMLPAAGQGAIGIEALA-DSAAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRDAAQYIRFISNKN 303
S IA FA + + +GK + + + DA +G + S
Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGKFSASIDKEISQPSDAFEVG----SLLLNQSPPE 295
Query: 304 V 304
V
Sbjct: 296 V 296
>gi|126460312|ref|YP_001056590.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548]
gi|158513494|sp|A3MWV7|HEM3_PYRCJ RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|126250033|gb|ABO09124.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548]
Length = 296
Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats.
Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 8/297 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L E + V P ++ + T GD + +R L +IG KG+F
Sbjct: 2 KIRVATRGSKLSLLQTQELLDQVKAVE--PKVEFELVVVKTTGDVVQDRPLYQIGVKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D AVHS KD+P++L GL I+ + R DV S SL L
Sbjct: 60 EKEVNLAVLRGEADVAVHSLKDLPSELTPGLVIAGFSRRAPPYDVVASREGYSLYTLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-KKEK 183
+V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG+ RL E
Sbjct: 120 AVVGTSSVRRAEFLRAVRPDVEVRPLRGNVDTRVGKILSGQYDAAIMAMAGLVRLYGWEA 179
Query: 184 VIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+K + E+ PP PGQG + ++++ + ER FL +
Sbjct: 180 PVKLSPIRPEEIPPPPGQGIVVAVVKEGEAWLIDILRRASDRRAAVEATAEREFLMHVGA 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C A+ G A + + F + G + + G D +GR AA+ IR I
Sbjct: 240 GCHVAVGGLARYEDGGMSFVAGYAS--GGRRYVIKLWG--EDPREVGRRAAEEIRKI 292
>gi|289705146|ref|ZP_06501550.1| hydroxymethylbilane synthase [Micrococcus luteus SK58]
gi|289558174|gb|EFD51461.1| hydroxymethylbilane synthase [Micrococcus luteus SK58]
Length = 377
Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats.
Identities = 89/356 (25%), Positives = 145/356 (40%), Gaps = 63/356 (17%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA +L + ++ + T+GD +T +L +GG G+F
Sbjct: 3 PLRIGTRGSALATTQTTHVAEALTERS---GLAHELVVIRTEGD-VTTGSLASLGGTGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ ++ G +D AVHS KD+P + L+I+A R D+RD + +L L
Sbjct: 59 ASALRAAVLDGAVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTLATLPEG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NKAHA 168
+ +GT S RR A L R D+ ++D RG ++TRL ++ A
Sbjct: 119 ARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAAGSPRGDLDA 178
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP---------------K 213
++LA AG+ RL + VI E ++ E P+PGQGA+ +E + +
Sbjct: 179 VILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAVEIRAEDESFLGRALLDPQAPVGR 238
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLAS 268
+++++ DT +V ERA L L+ C + I A + +V A
Sbjct: 239 LHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVARVSDGEAGAPRIEMTAMVAAL 298
Query: 269 DGKIFHEVSRN-----------GNRC------------DAINIGRDAAQYIRFISN 301
DG + + G+ A +G A+
Sbjct: 299 DGSRVLRRTSSVQLDPVPADVAGDPAAADEWLEDTLFVAAEALGVHVAEQFVAEGA 354
>gi|330507063|ref|YP_004383491.1| porphobilinogen deaminase [Methanosaeta concilii GP-6]
gi|328927871|gb|AEB67673.1| porphobilinogen deaminase [Methanosaeta concilii GP-6]
Length = 305
Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 150/301 (49%), Gaps = 9/301 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR SPLAL + L + + + T GD ++ L ++ G G+F EI
Sbjct: 2 GTRGSPLALRQTQIVQERLKGL----GIQTQLCRVKTSGDVFLDKPLHQLTGFGVFVAEI 57
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLALHSV 126
+++++SG+ID AVHS KD+PTK + L +SA L R+ DV + +S+++L +
Sbjct: 58 DERMLSGKIDLAVHSMKDLPTKRPEELIVSAVLKRDSPYDVLLCREKSVKSIEELDQGAR 117
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSS+RR A LLR R D++++ RG ++TRL+KL AI+LA AG++R+
Sbjct: 118 VGTSSMRRMAQLLRARPDLNILSLRGNLQTRLSKLERGDYDAIVLAEAGLERMGY-HPDY 176
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ E F PS QG I + + +A+ + ++ ER + + G C
Sbjct: 177 VRLDGERFVPSANQGTIIVVAKAGS-EAEACSRALDDAHARSETMIERKIMETVGGGCVV 235
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRDAAQYIRFISNKNVF 305
+A A + VL+ DGK F + + + + + D + + + + +
Sbjct: 236 PMAVHALVQKGEARVLAEVLSPDGKRFVRLEERISLVQNHLAVAEDMGERLMRMGGRELV 295
Query: 306 N 306
+
Sbjct: 296 D 296
>gi|323358316|ref|YP_004224712.1| porphobilinogen deaminase [Microbacterium testaceum StLB037]
gi|323274687|dbj|BAJ74832.1| porphobilinogen deaminase [Microbacterium testaceum StLB037]
Length = 372
Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 86/278 (30%), Positives = 143/278 (51%), Gaps = 7/278 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LALA + ++ + ++P+ ++GD +L+++GG+G+F
Sbjct: 4 PLRLGTRRSALALAQSQMVADAVAAAS---GREVELVPIVSEGDVNR-ASLSQLGGRGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L +G D VHS KD+PT +GL I+A PRED RDV I+ L L
Sbjct: 60 ANGLREALAAGRCDFLVHSLKDLPTAQPEGLVIAATPPREDARDVVITRDGTPLHALEAG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--KE 182
+ +GT S RR A LR + + D RG +++RL ++ + + A++LA AG+ RL
Sbjct: 120 ARVGTGSPRRIAQALRHNPRLDIRDIRGNVDSRLARVRDGELDAVILAAAGLSRLGGELG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ E L + ++P +PGQG++ +ET + + + ++ E T ++ ER L+ LD
Sbjct: 180 GLQSEPLGLAEWPTAPGQGSLAVETRTDIDADILAALSALDDEVTRAAITAERTVLSVLD 239
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
C + + A L +V A DG + R
Sbjct: 240 AGCHAPVGTHASIVDGDLRLRAVVYALDGAHRIGIDRT 277
>gi|88608800|ref|YP_506274.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str.
Miyayama]
gi|88600969|gb|ABD46437.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str.
Miyayama]
Length = 286
Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 11/294 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTRCSPLAL A +L ++ + T GD +++ LTE+GGK LF
Sbjct: 4 LKVGTRCSPLALIQARLVERALAPYCA----RTDLVEVKTSGDIVSDVPLTEVGGKALFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L +
Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPNGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT + RR L + VI RG I TR+ K N I+LA+ ++RL ++I
Sbjct: 120 VIGTCAPRRVVQLNQRF---RVIPLRGNIATRIEKAKN--LDGIILAFCALERLGLRRMI 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+++ P QGA+C+E + +EL+ I+ +T ERAFL E++G CK
Sbjct: 175 SEVIHENVMLPGVAQGALCVEFRKKDRFLRELILNISDRETIICTAAERAFLEEINGDCK 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+A+ A K + LYF G++ + + S G+ +A +GR AA + +
Sbjct: 235 TALGALAIVKNNILYFTGMLAKDNRPRYFRTS--GSCLNAKQVGRRAALALLRM 286
>gi|116671313|ref|YP_832246.1| porphobilinogen deaminase [Arthrobacter sp. FB24]
gi|116611422|gb|ABK04146.1| hydroxymethylbilane synthase [Arthrobacter sp. FB24]
Length = 332
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL +T L + P + ++ + T GD + +L+++GG G+F
Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAIGGFP---VELVHIRTDGD-VLTGSLSQMGGTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ + D AVHS KD+PT GL ++A R D+RDV + L DL
Sbjct: 58 VAALREALLRDDCDVAVHSLKDLPTGAAPGLNLAATPKRVDVRDVLCARDGFKLADLPQG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--------------NNKAHAIL 170
+ +GT S RR A L R D+ V+D RG ++TRL ++ + A++
Sbjct: 118 ARVGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLGRVPGLPGNTTDAVVLGKSCDLDAVV 177
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP------------KAQELV 218
LA AG++R+ + + E L + P+ GQG++ IE + + +
Sbjct: 178 LAAAGLERIGRLDTVSEYLETDVMLPAAGQGSLAIECRTADAPRRTGSTEGSQGPLAQAL 237
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
++ DT +V ERA LA L+ C + + +A+ KGS LY V A DG R
Sbjct: 238 AALDDTDTRLAVTAERALLARLEAGCAAPVGAYAFRKGSMLYLEAAVCAVDGSATVRDKR 297
>gi|313901219|ref|ZP_07834707.1| hydroxymethylbilane synthase [Clostridium sp. HGF2]
gi|312954177|gb|EFR35857.1| hydroxymethylbilane synthase [Clostridium sp. HGF2]
Length = 299
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 107/277 (38%), Positives = 153/277 (55%), Gaps = 2/277 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LALA E ++ L + P H+ I ++TKGDRI + L ++ KG+F
Sbjct: 3 IRMGTRGSALALAQCNEVKALLEKAY--PQHSFEICVITTKGDRIQHVALDQMKDKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++L+ ID AVHS KDMP+ L + L + L RED RDV + A SL+ L LH+
Sbjct: 61 KEIEQQLLEHTIDLAVHSMKDMPSVLDERLCFTETLLREDARDVLVLRNAASLESLPLHA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I T S RR+ LLR R D+ ++ RG IETRL KL + + I+LA AG+KRL+ + I
Sbjct: 121 RIATGSKRRRFQLLRQREDLEIVGIRGNIETRLKKLEDQQLDGIVLAAAGLKRLQLAQYI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ QGAI IE H ELV + + + V ERAFL EL+G C
Sbjct: 181 TQTLPEHIMVPAVAQGAIAIEVHKKRNDLVELVNALCTKRVDEEVCAERAFLQELNGGCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ + + + + + DG ++ +G R
Sbjct: 241 TPLGARCILHEADAELFAVYGSEDGTRLFDLHVSGPR 277
>gi|83282130|ref|XP_729634.1| porphobilinogen deaminase [Plasmodium yoelii yoelii str. 17XNL]
gi|23488022|gb|EAA21199.1| porphobilinogen deaminase, putative [Plasmodium yoelii yoelii]
Length = 583
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 101/341 (29%), Positives = 170/341 (49%), Gaps = 41/341 (12%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIG 59
K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ G
Sbjct: 69 ATKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFG 128
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKG+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S ++L+
Sbjct: 129 GKGIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKNLR 188
Query: 120 DLALHS-----------VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
D+ L S I TSSLRR + + ++ + RG I TR+ KL NN +
Sbjct: 189 DINLSSHVIDKEIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINTRIAKLFNNSFDS 248
Query: 169 ILLAYAGIKRL----------------------------KKEKVIKEILNIEDFPPSPGQ 200
I++A+ G++RL + + LN P+ Q
Sbjct: 249 IIIAFCGLERLVSKKILRQIMKNNIKDKSYIINYKNISIDLRHLNIQKLNTNIMCPALCQ 308
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
G I + ++ NNP+ +++K IN+E + N ERAFL ++DGSC I G+ + ++
Sbjct: 309 GIIGVTSNKNNPEISQILKNINNEKSQIMANIERAFLQKIDGSCTMPIGGYTKFSKNKIF 368
Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
F I+ +G +++ + D I +AA+ I+
Sbjct: 369 FNAIINDINGLENYKIKVVRHLNDLDGIADEAAEKIKEKIG 409
>gi|225389494|ref|ZP_03759218.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme
DSM 15981]
gi|225044437|gb|EEG54683.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme
DSM 15981]
Length = 301
Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 155/301 (51%), Gaps = 15/301 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ +SL + P + + T GD+I N+ L E GGKG+F
Sbjct: 4 TIRIGTRNSRLAMIQTEMVAASLREA--APGIQVSLEARMTTGDKILNKPLQEFGGKGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E E+ ++ G +D AVHSAKDMP +L +GL I RED RDV ++ + +
Sbjct: 62 VSEFEEGILEGRLDLAVHSAKDMPMELAEGLSIVGVPMREDPRDVLVTAAGRPVPKTGE- 120
Query: 125 SVIGTSSLRRKALLLRWRSD------ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
VIGTSS RRK + ++ + + RG ++TRL KL + H I+LA AG+KR
Sbjct: 121 IVIGTSSPRRKLQIELLGTNLWPGGSVRCENLRGNVQTRLGKLESGMYHGIILAAAGLKR 180
Query: 179 LKKEKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
L + + + L E F P+ GQG + +E +A ++ I+H +TW +N ER
Sbjct: 181 LGLLEDPRYNFQFLECESFVPAGGQGILAVEGRAEG-RAAGILSGISHRETWLCLNLERQ 239
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L LD C I ++ + L +GI +G+++ ++ G +A + R AA+
Sbjct: 240 VLKLLDAGCHEPIGVYSRLEDGLLEVFGISGR-NGRVY-KIHLKGQPEEAGELARRAAEG 297
Query: 296 I 296
+
Sbjct: 298 L 298
>gi|295395608|ref|ZP_06805802.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030]
gi|294971627|gb|EFG47508.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030]
Length = 821
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 13/305 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA + + + + I+ + T+GD L +GG G
Sbjct: 498 TRTVRLGTRRSNLARSQSVGVAQDIAAHTGW---RVEIVEVVTEGDVNM-TPLANMGGTG 553
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + L+SG+ID AVHS KD+PT G+ ++A PR D DV ++ + L
Sbjct: 554 VFVSAVRQALLSGKIDIAVHSLKDLPTAQAPGITLAAVPPRVDPSDVLVARDGLTFDTLP 613
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT S RR A + R D+ + RG ++TR+ + + + A++LA AG++RL +
Sbjct: 614 QGAVVGTGSPRRAAQMRAARPDLDIRGVRGNVDTRIKYVTDGRLDAVVLAAAGMRRLGRL 673
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-------NPKAQELVKVINHEDTWDSVNCERA 235
+ + L E P+PGQGA+ IE + K + + I+ E T+ +V ERA
Sbjct: 674 AEVSQTLTTELMLPAPGQGALAIECRAENADREPFDAKLRSGLLAIHDETTYRAVVAERA 733
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAA 293
L+ C + I A ++ ++ GK N AI++G A
Sbjct: 734 ILSRAQAGCSAPIGALANVTERSIELSAVMADDAGKLARITRSVANTGVNAAIDVGTQIA 793
Query: 294 QYIRF 298
+
Sbjct: 794 DELLD 798
>gi|269958021|ref|YP_003327810.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894]
gi|269306702|gb|ACZ32252.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894]
Length = 343
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 142/313 (45%), Gaps = 18/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA + L ++ P + ++ + T GD + +L +GG G+F
Sbjct: 7 PLRLGTRASLLATTQSGLVAKRLEELTGRP---VELVHIRTDGD-VLTGSLASLGGTGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ D AVHS KD+PT ++GL RED RD + +L L
Sbjct: 63 VAALREALLDDRCDVAVHSLKDLPTAAVEGLTF-VTPEREDPRDALCARDGLTLDTLPRG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182
+ IGT S RR A L R D+ V+D RG ++TRL + + A++LA +G+ RL +
Sbjct: 122 ARIGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLKRALGPDADLDAVVLACSGLARLGRT 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNCERAFLA 238
+ + L+ P+PGQGA+ +E + ++H T SV ERA LA
Sbjct: 182 DTVTQALDPAVVAPAPGQGALAVEARTTDLAPGGPLAAAFAALDHRATRLSVTAERAVLA 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-------VSRNGNRCDAINIGRD 291
L+ C + + A L +V DG + +G+ A ++G
Sbjct: 242 RLEAGCAAPVGALARVDEGQLTLTAVVARVDGTEKLRHRASVALGAISGDDDAARDLGVR 301
Query: 292 AAQYIRFISNKNV 304
A+ + ++
Sbjct: 302 VAEALLADGAADL 314
>gi|148253694|ref|YP_001238279.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1]
gi|146405867|gb|ABQ34373.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1]
Length = 325
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 141/324 (43%), Gaps = 22/324 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + FRIGTR S +ALA E L IP +I I+ T GD L GG
Sbjct: 1 MTR--FRIGTRKSTMALAQTEEIARRLQAA--IPSLDIEIVKFETTGDSDQTSKLLTHGG 56
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG F EI + ++ G + A+HS KDMP + GL I+A L R+ DV + SL
Sbjct: 57 KGGAFVAEIRRAMLDGRLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRRGLSL 116
Query: 119 KDLAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--------- 165
+ IGT+++RR A R +I FRG +TR+ KL+N +
Sbjct: 117 DEFRKDGGRGFKIGTNAVRRAAYARRLFPQAELIHFRGAADTRIRKLDNGELQRLPDGGA 176
Query: 166 ---AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A +G++R+ D P+ GQG + +E + + + ++ I+
Sbjct: 177 VGPADALIMARSGLERVGLSDRASFDFAAADMLPAVGQGIVAVECPSLDWETRRILATID 236
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ ER L L+G C S IAGFA G + VL DG F E R G
Sbjct: 237 DGAARSCADAEREVLWVLNGHCNSPIAGFATIDGDQMTLTASVLDEDGGRFIEAQRAGPA 296
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+GR + +
Sbjct: 297 DRPRELGRTVGLELLANGAAELIE 320
>gi|225561829|gb|EEH10109.1| porphobilinogen deaminase [Ajellomyces capsulatus G186AR]
Length = 345
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 146/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ L++ +ID VHS KD+PT++ + A +PRED RDV + +L
Sbjct: 75 NLWTEELEELLLAKQIDLVVHSLKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176
+L S++GTSS+RR A L R + D RG I+TRL KL + A++LA AG+
Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + TL IV + DGK E+ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQGAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKKVADELVVLGAGRIL 333
>gi|119963156|ref|YP_948463.1| porphobilinogen deaminase [Arthrobacter aurescens TC1]
gi|119950015|gb|ABM08926.1| porphobilinogen deaminase [Arthrobacter aurescens TC1]
Length = 332
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 30/300 (10%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL +T L V P + ++ + T+GD + +L+++GG G+F
Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIKTEGD-VKTGSLSQMGGTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L++ D AVHS KD+PT GL I+A R D+RDV + +L L
Sbjct: 58 VAALRDALLADACDVAVHSLKDLPTGAALGLSIAATPKRVDVRDVLCARDGMTLAQLPGG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--------------NNKAHAIL 170
+ +GT S RR A L R DI V+D RG ++TRL ++ + A++
Sbjct: 118 AKVGTGSPRRAAQLRAARPDIEVLDIRGNVDTRLGRVPGLPGNTTDEVVQGKSCDLDAVV 177
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK------------AQELV 218
LA AG++R+ + + E + P+PGQGA+ IE + + +
Sbjct: 178 LAAAGLERMDRLDTVSEFFESDVMLPAPGQGALAIECRTEDAPSVAGSAEGADGVLAQAL 237
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
+N DT +V ERA LA L+ C + + +A+ KGS L+ +V A DG +
Sbjct: 238 AALNDHDTRLAVTAERAVLARLEAGCAAPVGAYAFRKGSMLHLEAVVCAVDGTKTVREKK 297
>gi|115523326|ref|YP_780237.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisA53]
gi|115517273|gb|ABJ05257.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisA53]
Length = 326
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 20/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63
P RIGTR S +ALA + L ++ I+ T GD L GGKG
Sbjct: 4 PVRIGTRKSVMALAQTEDIARRLSAAAS--ELDVEIVKFETVGDSDQVSKLLPHGGKGGA 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F EI +I+G+++ +HS KDMP + GL I A L R+ D + +L +L
Sbjct: 62 FVAEIRAAVIAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPATDALVLRKGLTLDELK 121
Query: 123 L----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------A 166
IGT+++RR A R ++++I FRG +TR+ KL+N + A
Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVNIIHFRGAADTRIRKLDNGEMQRLPGGGEVGPA 181
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A+++A +G++R+ I ++ PS GQG + +E +N+ + ++ + +I+
Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAINDWQIRKYLAMIDDPVA 241
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
S + ER L L+G C S +A F+ GS + VL G +F E SR+G
Sbjct: 242 RLSCDAEREVLWVLNGHCNSPMAAFSTINGSDMTLSASVLDETGGLFIEASRSGPANRPR 301
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GR A + +
Sbjct: 302 ELGRAVALDLLNKGAAAIIE 321
>gi|150398808|ref|YP_001322575.1| porphobilinogen deaminase [Methanococcus vannielii SB]
gi|150011511|gb|ABR53963.1| porphobilinogen deaminase [Methanococcus vannielii SB]
Length = 304
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 16/311 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ S L ++ II + T GD+ N+ L ++G G+F
Sbjct: 2 KLRIGTRGSKLAMIQTKYIASLLNEL----GVETEIIIIKTTGDKDQNKKLADLG-IGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K++ EID AVHS KD+PT LQI+A RE D+ + + +
Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDLILWNKNSNFNIEYDE 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++GTSS+RR A L ++ V RG + TR++KL NN+ I++A AG+ R +
Sbjct: 117 LIVGTSSIRRTAFLELSNPNLKVKLLRGNVATRIDKLRNNEYDGIIMAKAGLIRQGIDLS 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+E P+P QG I + + + + E+++ IN + T+ ER L E G C
Sbjct: 177 DFNYEKLEI-LPAPAQGVIGVASRKKDYEINEILEKINDKKTYLEAVAERWSLKEYGGGC 235
Query: 245 KSAIAGFAYC--KGSTLYFYG-IVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYI- 296
++ FA+ L +V GK +S+ G N D + + +D + +
Sbjct: 236 QAPFGAFAFYDFDEGILTLKCDLVKEIHGKK-ISISKEGFVYCNVND-VELSKDLGKRVG 293
Query: 297 RFISNKNVFNF 307
++F
Sbjct: 294 LSFKESDIFEI 304
>gi|296394051|ref|YP_003658935.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985]
gi|296181198|gb|ADG98104.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985]
Length = 308
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 16/311 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A R ++ + + ++ ++T GD+ ++ +TEIG G+FT
Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRSL----GESAELVIVATVGDK-SSGPITEIG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ LI+GEID AVHS KD+PT + A R D DV +S + L +L S
Sbjct: 56 SALRDALIAGEIDIAVHSLKDLPTAQDPRFSLVAVPERADPSDVLVSRSGLPLAELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L R+D+ + RG ++TR+ K+ + AI++A AG+ RL +E+
Sbjct: 116 TVGTGAPRRAAQLRLARADLEIQPIRGNLDTRMRKVATAECDAIVVARAGLLRLGREQEA 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+L+ P+PGQGA+ +E + P E + ++HE + + ERA LAEL C
Sbjct: 176 TEVLHPAVMLPAPGQGALAVECRSDAPASLTETLAKLDHEHSRAASAAERAVLAELSAGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---------CDAINIGRDAAQY 295
+ A G TL V+A DG + A+ +GR A+
Sbjct: 236 SGPVGALARMTGQTLRVEASVIAIDGSRSVRAHAETSVLGTELLSQEQHAVALGRRVAES 295
Query: 296 IRFISNKNVFN 306
+R + +
Sbjct: 296 LRSMGAMELIG 306
>gi|239918007|ref|YP_002957565.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
gi|259646260|sp|C5CB88|HEM3_MICLC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|239839214|gb|ACS31011.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
Length = 377
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 89/356 (25%), Positives = 144/356 (40%), Gaps = 63/356 (17%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA +L ++ + T+GD +T +L +GG G+F
Sbjct: 3 PLRIGTRGSALATTQTSHVAEALTARS---GLAHELVVIRTEGD-VTTGSLASLGGTGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ ++ G +D AVHS KD+P + L+I+A R D+RD + +L L
Sbjct: 59 ASALRAAVLDGVVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTLATLPEG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NKAHA 168
+ +GT S RR A L R D+ ++D RG ++TRL ++ A
Sbjct: 119 ARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAVGSPRGDLDA 178
Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP---------------K 213
++LA AG+ RL + VI E ++ E P+PGQGA+ +E + +
Sbjct: 179 VILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAMEIRAEDESFLGRALLDPEAPVGR 238
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLAS 268
+++++ DT +V ERA L L+ C + I A + +V A
Sbjct: 239 LHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVARVGDGEAGAPRIEMTAMVAAL 298
Query: 269 DGKIFHEVSRN-----------GNRC------------DAINIGRDAAQYIRFISN 301
DG + + G+ A +G A+
Sbjct: 299 DGSRVLRRTSSVQLDPVPADVVGDPAAADEWLEDTLFVAAEALGVHVAEQFVAEGA 354
>gi|311896763|dbj|BAJ29171.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 318
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 15/286 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + V I + ++ ++T GD ++ +L IGG G+F
Sbjct: 3 PLRLGTRRSALAMAQSGMVA---EAVAGITGRRVELVEITTYGD-VSRESLARIGGTGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ G ID AVHS KD+PT GL ++A RED RD ++ +L +L
Sbjct: 59 VSALRDALLEGRIDLAVHSLKDLPTAAPAGLLLAAVPEREDARDALVARDGLTLAELVGK 118
Query: 125 S-----VIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
S +GT S RR A L +++ + RG ++TR+ + + + A++LA AG
Sbjct: 119 STGRAVRVGTGSPRRMAQLNAWARARGAELETVAIRGNVDTRIGFVASGELDAVVLATAG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + I E L+ E P+PGQGA+ +E +P ++ ++H T +V ERA
Sbjct: 179 LNRLGRAAEITEHLDTELMLPAPGQGALAVECV--DPTLAAVLARLDHRPTRAAVVAERA 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
LA L+ C + +A A G+ L G+V ++DG ++S NG
Sbjct: 237 LLATLEAGCSAPVAALATWAGTELRLDGVVGSTDGTELIKMSANGP 282
>gi|86751126|ref|YP_487622.1| porphobilinogen deaminase [Rhodopseudomonas palustris HaA2]
gi|86574154|gb|ABD08711.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris HaA2]
Length = 326
Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 145/322 (45%), Gaps = 20/322 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K P RIGTR S +ALA + + L + I+ T GD L GGKG
Sbjct: 2 KIPVRIGTRKSVMALAQTEDIANQLRAAAS--ELDPEIVRFETVGDSDQVSKLLPHGGKG 59
Query: 63 -LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L +
Sbjct: 60 GAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPANDSMVLRKGLTLDE 119
Query: 121 LA----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------N 164
L IGT+++RR A R ++ VI FRG +TR+ KL+N
Sbjct: 120 LKASRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADTRIRKLDNREKQRMPDGGEVG 179
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
A A+++A +G++R+ I ++ P+ GQG + +E V+ + ++ + +I+
Sbjct: 180 PADALIMARSGLERVGFVDRIVHDFTPQEMLPAAGQGIVAVECPVHEWQTRKYLALIDDP 239
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
+ ER L L+G C S +A ++ GS + VL G +F E +R G
Sbjct: 240 KARLFCDAEREVLWVLNGHCNSPMAAYSTINGSEMTLSASVLDEAGGLFIEATRTGPANR 299
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
+GR + +
Sbjct: 300 PRELGRTVGLDLLDKGAAAIIE 321
>gi|299132980|ref|ZP_07026175.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
gi|298593117|gb|EFI53317.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
Length = 325
Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats.
Identities = 92/324 (28%), Positives = 144/324 (44%), Gaps = 22/324 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S +A+A E L V + I+ T GD L+ GG
Sbjct: 1 MASDRLRIGTRKSAMAIAQTEEIARRLKAV----GTEVEIVKFETMGDIDQAGKLSPHGG 56
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG F +I + +++G + A+HS KD+P + GL I A L R+ DV + S+
Sbjct: 57 KGGAFVAQIREAVLNGRLHAAMHSLKDVPGNEDTPGLVIGAALSRDPPGDVLVLRPGTSV 116
Query: 119 KDLA----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163
+L IGT+S+RR A + R +I VI FRG ++R+ KL+
Sbjct: 117 DELKRTRGKGFEIGTNSVRRAAYVRRLFPEIEVIHFRGAADSRVRKLDQRAKQKLPDGGA 176
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A +G++R+ + I +I + P+ GQG + +E + + + ++ I+
Sbjct: 177 VGPADALIMARSGLERVGLKSRIAYEFSIAEMLPAVGQGIVAVECAARDFETRYILSAID 236
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ ER L L+G C S IAGFA G+ + VL G E SR G
Sbjct: 237 DASAHACADAEREVLWVLNGHCNSPIAGFAEIMGTEMQLAASVLDHAGSRIIEASRVGCA 296
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+GR + +
Sbjct: 297 SRPRELGRAVGMELLARGAAEIIE 320
>gi|327311850|ref|YP_004338747.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20]
gi|326948329|gb|AEA13435.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20]
Length = 303
Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 87/300 (29%), Positives = 141/300 (47%), Gaps = 6/300 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L S+ +V P I+ + T GD + +R L IG KG+F
Sbjct: 2 KLRVATRGSKLSLLQTELFIKSIKEVE--PDLEFEIVVVKTTGDLVQDRPLYAIGVKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ G+ D AVHS KD+P+++ + L ++ Y R+ D S + L
Sbjct: 60 EKEVNLAVLRGQADVAVHSLKDLPSEIHEDLVVAGYSKRDSPYDAIASTRGYDVWGLPRG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS+RR A L R D+ + RG ++TR+ K+ + A +LA AG++RL E
Sbjct: 120 ARVGTSSVRRGAFLKSIRPDLHIEPLRGNVDTRIGKVLSGAVDAAVLAEAGVRRLYGENP 179
Query: 185 IKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
EI ++ PP PGQG + ++ +L++ + ERAFL E+ G
Sbjct: 180 PVEIRRVKPDEIPPPPGQGIVAAVARKDDRGIIDLLRKASDPRAALEARAERAFLKEMGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C A+ G A + + F + DG V G +G AA+ ++
Sbjct: 240 GCHVAVGGLATATPNGIEFLAGWASVDGSRKVLVKAFG--ESPEEVGVRAARMLKSALGP 297
>gi|330945628|gb|EGH47118.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 201
Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats.
Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 2/202 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGA 202
E I ++++D P+ G G
Sbjct: 179 FEDRITSAISVDDSLPAGGPGG 200
>gi|299134347|ref|ZP_07027540.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
gi|298591094|gb|EFI51296.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
Length = 324
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 91/318 (28%), Positives = 141/318 (44%), Gaps = 20/318 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LF 64
RIGTR S +ALA E L P + I+ T GD+ L ++GGKG F
Sbjct: 1 MRIGTRKSVMALAQTNEIARQLTAA--DPSLAVEIVKFETMGDQDQTGKLLDLGGKGGAF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
+I + G ++ A+HS KDMP + GL I A L R+ D + +L +L
Sbjct: 59 VAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGAMLLRDPPTDALVVRNGVTLDELRR 118
Query: 122 --ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKAH 167
IGT+++RR A + R + +I FRG +TR+ KL+ A
Sbjct: 119 SRGKGFKIGTNAVRRAAYVRRLFPEAEIIHFRGAADTRIRKLDGREMQRLPDGGEVGPAD 178
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
A+++A AG++R+ I + ++ P+ GQG + +E + + + I++ +
Sbjct: 179 ALVMARAGLERVGFADRIVHQFSPDEMLPAVGQGIVAVECAAADWQTLARLAGIDNAVSR 238
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
ER L L+G C S IAG+A G + VL F EV+R G
Sbjct: 239 QCGEAEREVLWVLNGHCNSPIAGYATLDGGEISLKAAVLDEANHHFIEVTRRGPVGRPRE 298
Query: 288 IGRDAAQYIRFISNKNVF 305
+GR A + +V
Sbjct: 299 LGRAVAFDLLEKGAADVI 316
>gi|307353670|ref|YP_003894721.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571]
gi|307156903|gb|ADN36283.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571]
Length = 292
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 96/293 (32%), Positives = 147/293 (50%), Gaps = 20/293 (6%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LALA L D+ + +ST GD +TN L ++GG+G+F + +
Sbjct: 6 GTRASKLALAQTKRVSRMLYDL----EIETQVKKISTSGDNVTNVPLHKVGGQGIFVKAL 61
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ ++ GEID AVHS KD+P K G+ A L R+ D + + L ++G
Sbjct: 62 DDAILEGEIDFAVHSMKDIPAKRPDGVVTCAILKRDSPADFLVHY-----CPLKEVKIVG 116
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSS RR+A LR D+ V + RG ++TR+ KL + AI+LA AG++RL +
Sbjct: 117 TSSTRRRAQFLRGGLDVEVKELRGNVDTRIRKLKEGEYDAIVLAEAGMERLGL-DLPGTR 175
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
L + PSP QG I + ++P+ + + +NHE T + ERA + E+ G C +
Sbjct: 176 LLPQWHVPSPNQGIIAVVCR-DDPELIKTFEPLNHEQTRMDASVERAVMEEIGGGCYTPQ 234
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDAAQYIRFIS 300
F G + VL+ DGK + + +G + +A IG Q +R I
Sbjct: 235 GVFCE-DG---FLIAEVLSLDGKRWERIEDDGSSVEEARLIG----QKLRSIG 279
>gi|320106346|ref|YP_004181936.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4]
gi|319924867|gb|ADV81942.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4]
Length = 350
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 97/353 (27%), Positives = 145/353 (41%), Gaps = 60/353 (16%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-------LTEI 58
R+G+R S LAL A +SL + T GDR+ + E+
Sbjct: 3 LRLGSRGSQLALWQANHIAASLRGAGHTTKIT----IIRTTGDRMQDPAYVKENPVTPEM 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG+F +EIE+ L+ GEID AVHS KD+PT + ++A R D RD +S L
Sbjct: 59 DAKGIFIKEIEEALLRGEIDLAVHSLKDLPTVMDPRFTLAAIPTRADARDALLSPEWVQL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + +GT+S RRKA +L R D+ ++ RG I+TRL KL + A++LA AGI R
Sbjct: 119 HTLPDGARVGTTSPRRKAQMLAHRPDLQFVEIRGNIDTRLRKLAAGQCDALVLACAGIDR 178
Query: 179 LK--------------------------------KEKVIKEILN------------IEDF 194
L E+ E +
Sbjct: 179 LGARLLHPVDLDPAHPEHGRAPHVECVTHADHDHLEEHPTEHEPAGQVDWIRERFAADTM 238
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+PGQGA+ +ET + P+ V ++ +T +V ER L L G C + +
Sbjct: 239 CPAPGQGALGVETLSDAPEVIAAVSALDDAETRYAVEAERWMLHALGGGCSLPVGAWCVD 298
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCD-AINIGRDAAQYIRFISNKNVFN 306
K V A+DG + N + A ++G A + + +
Sbjct: 299 K----RLTANVTAADGDEMLSSEISANEGESARSLGERVAADLVARGARELLQ 347
>gi|150401746|ref|YP_001325512.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3]
gi|150014449|gb|ABR56900.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3]
Length = 342
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 87/304 (28%), Positives = 150/304 (49%), Gaps = 14/304 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL ++ L ++++ + I+ T GD+ + L+E+G G+F
Sbjct: 43 KIIIGTRGSKLALTQTNYIKALLENLNENIDIEVKIV--KTTGDKDQSSKLSELG-LGVF 99
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-----LK 119
T+E++ K+++ EID AVHS KD+PT + L I++ RE D+ + + +
Sbjct: 100 TKELDLKMLNNEIDIAVHSLKDVPTVWNENLTIASTPKRESYADLILWNKEDNDINIEKC 159
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ + ++GTSS+RR+ L ++ RG ++TRLNKL N + AI+LA AG+ RL
Sbjct: 160 NEKDNIIVGTSSIRRQEFLKIKYPNLKTKLLRGNVDTRLNKLRNKEYDAIILAEAGLNRL 219
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K + + P+P QG + + + +N + +++ INH+ T+ ER L E
Sbjct: 220 KM-DLSDFNYERLNILPAPAQGVVGVASRTDNKEVISILQKINHKKTFLEALAERYALRE 278
Query: 240 LDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQ 294
G C++ + L V+ + E + N + D A N+G +
Sbjct: 279 YGGGCQAPFGALSKYDEENKILNLKCSVVIGNTIKSKEENINCDIMDIEGAKNLGIKIGK 338
Query: 295 YIRF 298
YI+
Sbjct: 339 YIKQ 342
>gi|307195489|gb|EFN77375.1| Porphobilinogen deaminase [Harpegnathos saltator]
Length = 313
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/301 (31%), Positives = 148/301 (49%), Gaps = 39/301 (12%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ TKGD+I +++L +IG K LFTEE+E+ L G +D VHS KD+PT L G+ + A L
Sbjct: 1 MFTKGDKILDKSLPKIGEKSLFTEELEQALGEGSLDFVVHSLKDLPTILPAGMALGALLK 60
Query: 103 REDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
RED RD + ++L L SVIGTSSLRR A L R + V + RG + TRL
Sbjct: 61 REDPRDAVVMSKKFKEKTLSTLPKGSVIGTSSLRRTAQLARNLPHLKVENIRGNLNTRLK 120
Query: 160 KLNNNKAHAILLAYA--GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
KL++ K+ + A G+KR+ + I +I+ E+ + GQGA+ +E ++ + + L
Sbjct: 121 KLDDEKSAYAAIVLAAAGLKRIGWKDRISQIMEPEEALYAVGQGALGVECRESDWETRSL 180
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
++ + +T CER+FL L G C + +A + +G L G V + DG+ + +
Sbjct: 181 LEPLYDMETTLKCVCERSFLKTLGGGCSAPVAVASSLEGEELKITGAVWSLDGQTLIKDT 240
Query: 278 RNG----NRCD------------------------------AINIGRDAAQYIRFISNKN 303
G + D A +G+D A + + +
Sbjct: 241 CKGKLFIPKDDGEPPRKCPYQEPRLYCGVVPGRMNALSLHGAEQLGKDLANNLIEKNAID 300
Query: 304 V 304
V
Sbjct: 301 V 301
>gi|124485351|ref|YP_001029967.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit
[Methanocorpusculum labreanum Z]
gi|124362892|gb|ABN06700.1| uroporphyrin-III C-methyltransferase [Methanocorpusculum labreanum
Z]
Length = 542
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 25/308 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LALA + L + + + + T GD++T+R L +IGG
Sbjct: 1 MSK--IRIGTRGSKLALAQTKKVIGLLAEN----GIDAEYVIIKTTGDKVTDRGLHQIGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F E++ ++ GEIDCAVHS KD+P + KGL A L R+ D + + ++D
Sbjct: 55 FGMFVRELDNAILRGEIDCAVHSMKDIPAERPKGLLTVAVLKRDPPYDFLVMNG--KVED 112
Query: 121 LALHSVIGTSSLRRKALLLRWR---SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L VIGTSSLRRKA LLR+ + V RG ++TRL KL++ I++A AG+
Sbjct: 113 L---MVIGTSSLRRKAQLLRYFHNCPAVRVEMLRGNLDTRLGKLDDGLYDGIMVAEAGLM 169
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL K L+ + F P+ QG I I + + P+ + +N + ER +
Sbjct: 170 RLDY-KRNGVRLSPDMFVPAANQGTIAIVSR-DTPELRAAFAPLNDPQSALDCAIERIVM 227
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDAAQYI 296
++ G C + + F + + VL+ DG ++ G+ A G +
Sbjct: 228 EQVGGGCFTPMGIFCENQ----HLTAEVLSLDGTRAERITAEIGDLEGARVAGI----RL 279
Query: 297 RFISNKNV 304
+ + + +
Sbjct: 280 KNVGAELI 287
>gi|240275436|gb|EER38950.1| porphobilinogen deaminase [Ajellomyces capsulatus H143]
Length = 345
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKSTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + +L
Sbjct: 75 NLWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176
+L S++GTSS+RR A L R + D RG I+TRL KL + A++LA AG+
Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + TL IV + DGK E+ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
+ A + + +
Sbjct: 315 VFAKKVADELVVLGAGRIL 333
>gi|172039905|ref|YP_001799619.1| hypothetical protein cur_0225 [Corynebacterium urealyticum DSM
7109]
gi|171851209|emb|CAQ04185.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 316
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 18/315 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIG 59
+ +GTR S LA A R ++D ++ + + T GD + + + ++G
Sbjct: 3 NNRRLLVGTRGSTLATTQAGHVRQGMIDA----GYDAELHIVHTPGDASQASQIPVAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G+FTE + L E D AVHS KD+PT + R D R+V IS + L
Sbjct: 59 -VGVFTETLRTALDERECDVAVHSFKDLPTA-PDARFRAVVPKRVDSREVLISVDNKKLM 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + +GTS+ RR + L R D+ ++ RG I TR+ ++ + A++LA AG++R+
Sbjct: 117 ELPEGAKVGTSAPRRVSQLRALRPDLQILPLRGNIGTRMGRVGD-DLDAVILARAGLERV 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E ++ E P+P QGA+C+E ++ +A V NH ++ V ER L+
Sbjct: 176 GWLDKAAESIDPELILPAPAQGALCVEVRADDEEAWNSVADQNHTPSYACVVSERTVLST 235
Query: 240 LDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGR 290
L+ C + +A A + L G V A DG +R + R A +G
Sbjct: 236 LEAGCSAPVAAHATLNEQQNQLTVTGGVFAIDGSRKLLETRTVDIDLAGDWRAAAAGVGA 295
Query: 291 DAAQYIRFISNKNVF 305
+ + + +
Sbjct: 296 EIGRILLDAGAAELV 310
>gi|302387415|ref|YP_003823237.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1]
gi|302198043|gb|ADL05614.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1]
Length = 300
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/305 (32%), Positives = 149/305 (48%), Gaps = 15/305 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K RIGTR S LA+A A +L + ++ T+GDRI ++ L E GG
Sbjct: 1 MKSKTIRIGTRRSALAVAQANIMAEALERTGT--GLSAELVLKLTEGDRILDKPLLEFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F E E+ L+ GEID AVHSAKD+P +L +GL I A L RED RDV ++ + L
Sbjct: 59 KGVFVTEFEQALLRGEIDFAVHSAKDLPMELEEGLGIVAVLEREDPRDVLVTPASGILSG 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI------SVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+IGTSSLRRK + + + RG + TRL+KL I+LA A
Sbjct: 119 -KREIIIGTSSLRRKIQIEEIGKTMWPEALVRCENLRGNVLTRLSKLMEGSYDGIILAAA 177
Query: 175 GIKRLKK---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
G+KRL + + + F P+ GQG + +E + + + +VK + E+ +
Sbjct: 178 GLKRLGLWEDSRYHYHCFDCDTFIPAGGQGILAVEGRL-DSGLEAVVKSLEDEEARLCLT 236
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
ER L L+ C I ++ K + GI + G+ + G + +
Sbjct: 237 MERKILKLLNAGCHEPIGVYSRLKNGEIEILGI--SRRGEEAKRIHLRGGIGELDRLALL 294
Query: 292 AAQYI 296
AA+ +
Sbjct: 295 AAESL 299
>gi|325091275|gb|EGC44585.1| porphobilinogen deaminase [Ajellomyces capsulatus H88]
Length = 352
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 24 TKSTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 81
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + +L
Sbjct: 82 NLWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 141
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176
+L S++GTSS+RR A L R + D RG I+TRL KL + A++LA AG+
Sbjct: 142 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 201
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 202 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 261
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + TL IV + DGK E+ + +A
Sbjct: 262 NLLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 321
Query: 287 NIGRDAAQYIRFISNKNVF 305
+ A + + +
Sbjct: 322 VFAKKVADELVVLGAGRIL 340
>gi|163784391|ref|ZP_02179282.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880338|gb|EDP73951.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 185
Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 83/186 (44%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A L P + +I ++TKGD+I + L ++GGKGLF
Sbjct: 2 KIRIGTRKSKLALWQANFVAEQLKK--HFPELEVELIKITTKGDKILDVPLAKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S SLK+L
Sbjct: 60 VKEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITKREDPRDAFLSVKYSSLKELPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRK L R D+ + D RG ++TR+ KL + A++LAYAG+KRL E
Sbjct: 120 AVVGTSSLRRKVQLKINRPDLQIKDLRGNVDTRIRKLEEGQYDAVILAYAGLKRLGLEDK 179
Query: 185 IKEILN 190
+K++ +
Sbjct: 180 VKQVFS 185
>gi|167737626|ref|ZP_02410400.1| porphobilinogen deaminase [Burkholderia pseudomallei 14]
Length = 246
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 137/236 (58%), Gaps = 2/236 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRAL 246
>gi|134045720|ref|YP_001097206.1| porphobilinogen deaminase [Methanococcus maripaludis C5]
gi|132663345|gb|ABO34991.1| hydroxymethylbilane synthase [Methanococcus maripaludis C5]
Length = 304
Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats.
Identities = 86/297 (28%), Positives = 133/297 (44%), Gaps = 11/297 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+F
Sbjct: 2 KLRIGTRGSTLAMIQTEYIAGLLNDL----GVETEIIIVKTTGDKDQNKKLADLG-LGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K++ EID AVHS KD+PT + LQI+A RE D+ I
Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSEELQITATPKRESPDDIIIWRKDSDFDIEHDE 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RR + L +++ RG + TR+NKL + I++A AG+ R +
Sbjct: 117 LNIGTSSIRRTSFLQFTHPNLTPKLLRGNVATRINKLRTGEYDTIIMAKAGLIRQGIDLS 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E P+P QG I + + + K E++ I + T+ ER L E G C
Sbjct: 177 EFNYKKPEI-LPAPAQGVIGVASRKADTKINEILDKICDKKTYIEAAAERWALKEYGGGC 235
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296
++ FA + L ++ G I S G D + + ++ +
Sbjct: 236 QAPFGAFAIYDTEDGILNLRCELVDEQGTIKRVKSNEGFIICTTDDVELAKELGARV 292
>gi|331699360|ref|YP_004335599.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190]
gi|326954049|gb|AEA27746.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190]
Length = 327
Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats.
Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 22/297 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+A + + L H + ++P+ST GDR + + E+G G+F
Sbjct: 5 LRIGTRPSALAMAQSGQIADRLRAA----GHTVELVPVSTVGDR-SGAPVAELG-VGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + SGE+D A+HS KD+PT L + A RED RD ++ + L +L S
Sbjct: 59 SAVRDAVASGEVDVAIHSYKDLPTAPDPRLTLVAVPGREDPRDALVARDGKVLGELPAGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L + V+ RG ++TR+ K+ + + +++A AG++RL +
Sbjct: 119 RVGTGSARRTAQLQALGLGLEVVPIRGNVDTRIGKVTSGELDGVIVAAAGLRRLGRIGEA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQEL------VKVINHEDTWDSVNCERAFLAE 239
E+L P+P QGA+ +E P + E +++ +V ERA LA
Sbjct: 179 TELLEPVQMLPAPAQGALAVECRAGVPGSTEHGLALALTALLDDPAARAAVTAERAVLAS 238
Query: 240 LDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L+ C + I A L +V +DG S G+ DA
Sbjct: 239 LEAGCTAPIGALADVVSDLDDAGRVVDRLSLRAVVGTADG-ALLRASVTGDIDDAEK 294
>gi|86739201|ref|YP_479601.1| porphobilinogen deaminase [Frankia sp. CcI3]
gi|86566063|gb|ABD09872.1| hydroxymethylbilane synthase [Frankia sp. CcI3]
Length = 395
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 94/344 (27%), Positives = 147/344 (42%), Gaps = 59/344 (17%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
S LALA + ++L + ++P+ T GDR + +++IGG G+F + L
Sbjct: 49 SALALAQSGTVAATLRARV---GCAVELVPIVTAGDRSSGE-ISQIGGTGVFVSALRDAL 104
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132
+SGEID AVHS KD+PT GL ++A PR D RDV ++ + + L +L + I T S
Sbjct: 105 LSGEIDLAVHSLKDLPTATPPGLVLAAVPPRADPRDVLVAPSGRRLAELRAGARIATGSP 164
Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
RR A L + V+ RG ++TRL K + + A++LA+AG+ RL + + EIL
Sbjct: 165 RRAAQLRALGLGLEVVTIRGNVDTRLKKAIDGEVDAVVLAHAGLARLDRLDAVTEILEPT 224
Query: 193 DFPPSPGQGAICIETHVN--------------------------------------NPKA 214
P+PGQGA+ IE +
Sbjct: 225 VMLPAPGQGALAIECTGGAGLVVAGPARALVPAGPGSGPAVGQTGGETWSDGGQPVDTGL 284
Query: 215 QELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS---------------- 257
EL++ V++ + +V ERAFLA ++ C + + A
Sbjct: 285 AELLRFVLDDASSSVAVRAERAFLAGIEAGCTAPVGALAELLPELAEGAAAEAGGAPPAG 344
Query: 258 TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
L +V A DG G+ D +G+ A +
Sbjct: 345 RLCLRAVVAAPDGSDVLRRDVTGSAVDPEALGQRLADDMLSAGA 388
>gi|304393221|ref|ZP_07375149.1| porphobilinogen deaminase [Ahrensia sp. R2A130]
gi|303294228|gb|EFL88600.1| porphobilinogen deaminase [Ahrensia sp. R2A130]
Length = 324
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 85/317 (26%), Positives = 136/317 (42%), Gaps = 20/317 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTE 66
I TR S +ALA A L + +P ++ + + +GDR L GGKG F
Sbjct: 6 IATRKSKMALAQANHVADLLREA--VPGLDVDLAENNPRGDRDQISKLDRHGGKGGAFVA 63
Query: 67 EIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL-- 123
EI +++G A+HS KDMP + GL I AYL R+D D + ++ +
Sbjct: 64 EIRADIVAGRSQVAMHSLKDMPGNEETPGLVIGAYLTRDDPTDSLVLRDGITMDQMRETQ 123
Query: 124 --HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN------------KAHAI 169
+GT+S+RR A L + +I FRG ++R+ KL+ A I
Sbjct: 124 GDGLKLGTNSVRRAAFLRNLFPNAEIIHFRGAADSRIEKLDKGLMQQLVDGGEVGPADGI 183
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
LLA +G+ R+ I + P+ GQG + +E ++ + +E + I+ +
Sbjct: 184 LLATSGMARVGVSDRISHTFTTSEMLPAVGQGIVAVECGSSDWQTREWLARIDDANARAC 243
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ER L LDG C S IA + +G T+ V+ DG + +G +G
Sbjct: 244 AEAEREVLWVLDGHCNSPIAAHSVIEGDTMTMESAVMEIDGDKIIRHTASGPAEYPRELG 303
Query: 290 RDAAQYIRFISNKNVFN 306
R + + +
Sbjct: 304 RTVGLALVAKGAQAIIE 320
>gi|207109051|ref|ZP_03243213.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_CA4C1]
Length = 242
Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats.
Identities = 90/246 (36%), Positives = 131/246 (53%), Gaps = 5/246 (2%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
+R S LAL A + L I + TKGD+I + L +IGGKGLFT+E+E
Sbjct: 1 SRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFTKELE 57
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +GT
Sbjct: 58 ELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGT 117
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KVIKEI 188
+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + ++
Sbjct: 118 TSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYRKA 177
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
++E+ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C+ I
Sbjct: 178 FSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEKSAFCCRLEREFIKGLNGGCQIPI 236
Query: 249 AGFAYC 254
A
Sbjct: 237 GVHASL 242
>gi|256371068|ref|YP_003108892.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331]
gi|256007652|gb|ACU53219.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331]
Length = 291
Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 147/302 (48%), Gaps = 16/302 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR S LA A L ++ + T GDR +L EIGG+G+F
Sbjct: 3 PVRIATRRSALARWQASLVGERLGR--------YELVEVHTAGDRDQASSLAEIGGQGVF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E++ ++ GE D AVHSAKD+PT L ++A L R D RD + L++LA+
Sbjct: 55 VKEVQAAVVRGEADIAVHSAKDLPTAAGP-LLLAAVLERADARDAIV---GARLEELAIG 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR A L R D+ V+ RG I TRL ++ + AI++A A ++RL E+
Sbjct: 111 ARVGTSAPRRAAQLRLLRPDLEVVSIRGNIATRLGRV--GELDAIVMAVAALERLGLEEP 168
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L E P GQGAI +E + E ++ ++ + + + ERA LA C
Sbjct: 169 PWWPLPEEVLCPQAGQGAIAVECAPDADGLIERLRSLDDDRSRREIEAERAVLAAFGTGC 228
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ A+ GS+L + + DG EV R G D +G A+ +R + +
Sbjct: 229 ALPLGARAHADGSSLRLRAVAVDPDGTRQLEVEREG--VDPATLGATVAEVLRRLGADAL 286
Query: 305 FN 306
Sbjct: 287 VG 288
>gi|154150777|ref|YP_001404395.1| porphobilinogen deaminase [Candidatus Methanoregula boonei 6A8]
gi|153999329|gb|ABS55752.1| porphobilinogen deaminase [Methanoregula boonei 6A8]
Length = 294
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 92/301 (30%), Positives = 143/301 (47%), Gaps = 20/301 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LALA + + + +ST+GD +T L EIG +G+F
Sbjct: 2 PVRIGTRGSRLALAQTAIVIKKIEAL----GIEVEQKIISTQGDEVTGVPLHEIGKQGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++ +++ EIDCAVHS KD+P G+ SA L R+ D S
Sbjct: 58 VRALDDAILNNEIDCAVHSMKDIPAIRPSGVFTSAILKRDSPADYLAFTGPVS-----AV 112
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
V+GTSS RR+A LLR + + D RG ++TR+ K++ + +A++LA AG+ RL +
Sbjct: 113 KVVGTSSTRRRAQLLRHDPGLDIRDLRGNVDTRIRKMSEGQYNAVVLAEAGLSRLGIR-I 171
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E L E F PSP QG I + + +P E++ ++H T V ERA + ++ C
Sbjct: 172 PGERLPPEKFVPSPNQGTIAVVSRA-DPSIMEVLSSLDHPATRKDVAIERAVMEQVGAGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDAAQYIRFISNKN 303
+ + + K VL+ DG + + G +A G +R +
Sbjct: 231 FTPMGIYC--KDG--SLIAEVLSLDGTRAERIEKKIGTLEEARAEGNA----LRERAGAL 282
Query: 304 V 304
+
Sbjct: 283 I 283
>gi|187734604|ref|YP_001876716.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835]
gi|187424656|gb|ACD03935.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835]
Length = 325
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 92/312 (29%), Positives = 147/312 (47%), Gaps = 23/312 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-- 59
K IGTR S LALA A R++L + P ++ + T GDR T+ L ++
Sbjct: 3 SKNTLIIGTRGSALALAQADMVRAAL--SLRYPELDVRCEIIHTIGDRRTDVPLADVARV 60
Query: 60 ----GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
KG+F +E+E L G ID AVHS KD+P++L G ++A LPR + DV I+
Sbjct: 61 SGMVDKGIFIKELETALRDGRIDVAVHSLKDVPSELAAGFTLAAVLPRAAVEDVLITKE- 119
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKLNN-NKAHAILLAY 173
D + T S+RR+ + + S + + RG + TRL KL A++LA
Sbjct: 120 ---PDWNGSGTLATGSVRRRLMARTYWGSGLRFENLRGNVPTRLGKLVEHPGWDAVILAR 176
Query: 174 AGIKRLKK---------EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
AG++RL K+ L +E F P+ GQG + +E ++ + E+++ IN
Sbjct: 177 AGLERLGLYAPETLVEGRKLYMRPLPVEVFIPAVGQGIVGMECRSSDRETAEMLEGINDP 236
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
+++ ERAFL L +C + + +A+ G L + V G+R
Sbjct: 237 ESFACALAERAFLVRLGANCSTPVGVYAHPDGEELVLRAAYYVPGREEPFAVVIRGDRKA 296
Query: 285 AINIGRDAAQYI 296
+G A + +
Sbjct: 297 PEALGLRAFEEL 308
>gi|167900391|ref|ZP_02487792.1| porphobilinogen deaminase [Burkholderia pseudomallei 7894]
Length = 245
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 136/235 (57%), Gaps = 2/235 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRA 245
>gi|134109785|ref|XP_776442.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259118|gb|EAL21795.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 481
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 95/410 (23%), Positives = 151/410 (36%), Gaps = 105/410 (25%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK-----------------------IPPHNI 38
+ F +GTR S LAL L +H + P+
Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSGAGSKFGETREEGDDAEQGDVPFVHPYTF 88
Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L
Sbjct: 89 SIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148
Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
G +I R D RD + + L+DL +V+GT S+RR A L R ++
Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208
Query: 149 DFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
D RG + TR NKL+N + A++LA +G++RL L+ + GQGA+ IE
Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY------------- 253
+P+ + ++ + H T S ER L L+G C + +
Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESELVELDEDEVAAHP 328
Query: 254 -----------------CKGS--TLYFYGIV----------------------------- 265
+G L+F G+V
Sbjct: 329 ELLEGVEDPFKGQEESPLEGDSPMLWFSGLVDTTSAPTPSTPTFSSHSLPPLRTRLAKLT 388
Query: 266 -----LASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
++DG + + A G + A+ +R + + +
Sbjct: 389 LHSCVTSTDGSKHVLFTPPPVLVRSYRQAEQFGEECARRLRGMGAGEILD 438
>gi|237786464|ref|YP_002907169.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM
44385]
gi|237759376|gb|ACR18626.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM
44385]
Length = 295
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 142/306 (46%), Gaps = 20/306 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGGKGL 63
RIGTR S LAL A R +L+ + + T GD + IG G+
Sbjct: 2 IRIGTRGSALALTQAGHVRDALISA----GLEAELFTVHTPGDASQGAGTPVARIG-VGV 56
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ + L +GE AVHS KD+PT A PR D RDV S L DL
Sbjct: 57 FTQTLRTALAAGECSLAVHSFKDLPTA-PDPRFRLAVPPRVDARDVVFSRDRIPLADLPA 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S+IGT + RR + R D +V+ RG ++TR+ +L A++LA AG++RL +
Sbjct: 116 GSMIGTGAPRRMGQVRALRPDCTVVPIRGNVDTRIGRL-EKDLDAVILARAGVERLGRLA 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN-----NPKAQELVKVINHEDTWDSVNCERAFLA 238
E L+++ P+P QGA+ +E + +A + V++HE + ERA LA
Sbjct: 175 EATETLDVDTVLPAPAQGALAVEAVAEGHENCSEEALYAIHVLDHEMSHRRAIAERAVLA 234
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+ C + + +A F V A DG S G +IG AA+Y+R
Sbjct: 235 SLNAGCTAPVGAYATED----SFRAGVFAVDGSERVTWSSEGEPT--EDIGHQAAEYLRA 288
Query: 299 ISNKNV 304
+ ++
Sbjct: 289 HNAMDL 294
>gi|58264690|ref|XP_569501.1| hydroxymethylbilane synthase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57225733|gb|AAW42194.1| hydroxymethylbilane synthase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 481
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 95/410 (23%), Positives = 151/410 (36%), Gaps = 105/410 (25%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK-----------------------IPPHNI 38
+ F +GTR S LAL L +H + P+
Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSGAGSKFGETREEGDDAEQGDVPFVHPYTF 88
Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L
Sbjct: 89 SIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148
Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
G +I R D RD + + L+DL +V+GT S+RR A L R ++
Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208
Query: 149 DFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
D RG + TR NKL+N + A++LA +G++RL L+ + GQGA+ IE
Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY------------- 253
+P+ + ++ + H T S ER L L+G C + +
Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESELVELDEDEVAAHP 328
Query: 254 -----------------CKGS--TLYFYGIV----------------------------- 265
+G L+F G+V
Sbjct: 329 ELLEGVEDPFKGQEEIPLEGDSPMLWFSGLVDTTSAPTPSTPTFSSHSLPPLRTRLAKLT 388
Query: 266 -----LASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
++DG + + A G + A+ +R + + +
Sbjct: 389 LHSCVTSTDGSKHVLFTPPPVLVRSYRQAEQFGEECARRLRGMGAGEILD 438
>gi|327398182|ref|YP_004339051.1| porphobilinogen deaminase [Hippea maritima DSM 10411]
gi|327180811|gb|AEA32992.1| porphobilinogen deaminase [Hippea maritima DSM 10411]
Length = 299
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 90/278 (32%), Positives = 144/278 (51%), Gaps = 10/278 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K +IGTR S LAL A + L D I+P+ T GD+ T++ L ++GGKG
Sbjct: 5 RKQLKIGTRGSKLALWQAEFAKKRLEDK----GFECEIVPIKTSGDK-TDKPLYQLGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIEK L+ ID AVHS KDM + R+ D+F+S L ++
Sbjct: 60 LFIKEIEKALLDKTIDIAVHSLKDMSVFEDERFDFI-VFERDYWEDIFVSFEGNFL-EIK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ +GTSSLRR+A LL++R D +D RG ++TRL KL + + AI+++ +G+KRL
Sbjct: 118 KNARVGTSSLRRRAELLQYRDDFEFVDLRGNLDTRLKKLRDGEVDAIVVSKSGLKRLGLY 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ GQG I +E + + ++ +K + E T ++ ERAF+ + +
Sbjct: 178 DEAY-MYDLRFATPAAGQGVIAVEFLSDF-EFRDELKQLEDEKTRICIDSERAFVRQFNA 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRN 279
SC I A + + D + + SR
Sbjct: 236 SCNYPIGALARFEQDEFFMQITYGFVDNLRRVIKYSRR 273
>gi|296109592|ref|YP_003616541.1| porphobilinogen deaminase [Methanocaldococcus infernus ME]
gi|295434406|gb|ADG13577.1| porphobilinogen deaminase [Methanocaldococcus infernus ME]
Length = 287
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 138/296 (46%), Gaps = 17/296 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A L + + + + T+GD+I +R L IG G+FT
Sbjct: 1 MIIGSRGSKLALYQANLVLKKLKSL----GIDGEVKIIKTRGDQIKDRALHSIG-IGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ L++ EID AVHS KD+PT L L R+ D+ I++
Sbjct: 56 KELDLSLLNHEIDIAVHSLKDIPTVWNSRLSY-VVLERDYPNDLLIANK-------EDIK 107
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR+A L D RG ++TRL KL +N+ AI+L+ AG++RL +
Sbjct: 108 VIGTSSLRRRAFLKELYRDAEFKLLRGNVDTRLRKLKDNEYDAIVLSEAGVRRLNIDLSE 167
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+PGQG I + + K + +++ IN + T+ ER L EL C
Sbjct: 168 FLVYKLPI-LPAPGQGVIAVAYRKEDEKIKNILEKINDKKTFLETTAERKALNELGCGCH 226
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298
FA +G L V D I E S + A +G + +R
Sbjct: 227 VPFGAFAKYEGKRLMLKVAVANKDRVIKKESSICCEVDEIEKAEKLGESLGRELRR 282
>gi|269791662|ref|YP_003316566.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099297|gb|ACZ18284.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 307
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 99/290 (34%), Positives = 145/290 (50%), Gaps = 12/290 (4%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
TR SPLA+A A + + + H++ ++ +ST GDR R L GG G F + +E
Sbjct: 8 TRSSPLAMAQARMWKDRIESL----GHSVRLLDVSTHGDRDRRRHLACFGGFGAFVKALE 63
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+L+SG+ AVHS KD+P+ GL I+ L R DV ++ SL++L +VIGT
Sbjct: 64 DRLLSGQGHGAVHSLKDVPSVQPDGLVIAGVLERGPRGDVLVTREGLSLEELPSGAVIGT 123
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189
SS+RR A + R D++V RG + +RL KL H I+LA AG++RL + E+
Sbjct: 124 SSIRRAAQVRMLRGDLNVECCRGNVHSRLRKLEQGLFHGIVLARAGLERLGIRAPMAELP 183
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F SPGQGA+ +E + + L + H TW V ER+FL C + +A
Sbjct: 184 ----FITSPGQGAVALEAREGS-ELHLLGARLTHRSTWLEVLAERSFLKAFGMGCSAPVA 238
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYI 296
A TL VL+ +G E + DA +G A + I
Sbjct: 239 ASAVMDRDTLTLKVQVLSPNGTSAAEAEVSCVPWGEEDAYALGEAAFREI 288
>gi|45358435|ref|NP_987992.1| porphobilinogen deaminase [Methanococcus maripaludis S2]
gi|44921193|emb|CAF30428.1| Porphobilinogen deaminase [Methanococcus maripaludis S2]
Length = 304
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 11/297 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+F
Sbjct: 2 KLRIGTRGSTLAMVQTEYIAGLLNDL----DIETEIIIVKTTGDKDQNKKLADLG-IGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDE 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSS+RR + L +++ RG + TR+NKL N + I++A AG+ R +
Sbjct: 117 LNVGTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGIDLS 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P+P QG I + + + K ++++ I + T+ ER L E G C
Sbjct: 177 EFNYKKLDI-LPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGC 235
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296
++ FA + L ++ G I S G D + + ++ +
Sbjct: 236 QAPFGAFAIYDTEEGILNLRCELVDEQGTIKRVKSNEGFVICTTDDVELSKELGARV 292
>gi|227502550|ref|ZP_03932599.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725]
gi|227076712|gb|EEI14675.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725]
Length = 295
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 8/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA A R L+D + + ++T GD TN E G G+FT
Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDA----GFDSELHIVTTAGD--TNMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + L GE D AVHS KD+PT ++ R+D R+V ++ +L L +
Sbjct: 56 QALREALCRGECDIAVHSFKDLPTAEDDRFRL-VIPQRQDSREVLVARDGMTLMQLPEGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG I+TR++K+ + + A++LAYAG+ R E
Sbjct: 115 RVGTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRA 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+I + E F P+P QGA+ IE A L V++ + T ++ RA LA L+ C
Sbjct: 175 SDIFDPELFMPAPAQGALAIEAVAGTEAAAALDAVVDEQATAAALAE-RAVLARLEAGCT 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + G L G V A DG + +G +A +G + + ++
Sbjct: 234 APVAATSRWNGDQLTVRGGVFALDGSRQLTATASGTAAEAAELGARVSDELFAQGAADLL 293
Query: 306 N 306
Sbjct: 294 G 294
>gi|321253441|ref|XP_003192732.1| phorphobilinogen deaminase; Hem3p [Cryptococcus gattii WM276]
gi|317459201|gb|ADV20945.1| Phorphobilinogen deaminase, putative; Hem3p [Cryptococcus gattii
WM276]
Length = 481
Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 94/410 (22%), Positives = 146/410 (35%), Gaps = 105/410 (25%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIP-----------------------PHNI 38
+ F +GTR S LAL L +H P+
Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSAAGSKFGETREEGDDAEQGDVPFVHPYTF 88
Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L
Sbjct: 89 TIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148
Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
G +I R D RD + + L+DL +V+GT S+RR A L R ++
Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208
Query: 149 DFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
D RG + TR NKL+N + A++LA +G++RL L+ + GQGA+ IE
Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA--------------IAGFA 252
+P+ + ++ + H T S ER L L+G C IA
Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESELVELDEDEIAAHP 328
Query: 253 YCKGS----------------------------------------------------TLY 260
+ L
Sbjct: 329 ELREGVEDPFKDQEESPLEGDSPMLWFSGLVDTTSAATPSTPTFSSHSLPPLRTRLAKLT 388
Query: 261 FYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+ V ++DG + + A G + A+ +R + + +
Sbjct: 389 LHSCVTSTDGTKHVLFTPPPVLVRSYRQAEQFGEECARKLRGMGAGEILD 438
>gi|126178933|ref|YP_001046898.1| porphobilinogen deaminase [Methanoculleus marisnigri JR1]
gi|125861727|gb|ABN56916.1| hydroxymethylbilane synthase [Methanoculleus marisnigri JR1]
Length = 294
Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 97/288 (33%), Positives = 136/288 (47%), Gaps = 16/288 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA + L D ++ ++T+GD T L IGG+G+F
Sbjct: 3 LRIGTRGSALALAQTNKVVGMLADR----GIEAEVVTIATEGDTATGVPLHAIGGQGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++ ++ GEID AVHS KD+P GL A L R+ D + L S
Sbjct: 59 RALDDAILRGEIDAAVHSMKDIPAARPAGLVCCAVLERDSPADFLVHE-----CPLDAVS 113
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIG+SS RR A LLR + V RG ++TRL KL + AI+LA AG++RL +
Sbjct: 114 VIGSSSTRRCAQLLRDAPALEVKQLRGNVDTRLRKLREGQYDAIVLAEAGLQRLGLT-LP 172
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L + F PSP QG I + ++P ++H T V ERA + E+ G C
Sbjct: 173 GEPLPTDRFVPSPNQGTIAVVCR-DDPAVAGAFAALDHAPTRLDVEIERAVMEEVGGGCF 231
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDA 292
+ + G+ VLA DG + + R+ +A GR
Sbjct: 232 TPQGIYCR-NGN---LIAEVLALDGSRWERIERHVATVGEAREWGRAL 275
>gi|219852323|ref|YP_002466755.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c]
gi|219546582|gb|ACL17032.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c]
Length = 294
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 89/302 (29%), Positives = 140/302 (46%), Gaps = 20/302 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + S L + ++T GD +T L EIGG+G+F
Sbjct: 3 IRVGTRGSALARVQTEKVCSMLASR----GIETETVVITTHGDAVTGVPLHEIGGQGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++ + + EIDCAVHS KD+P G+ A L R D ++
Sbjct: 59 RALDDAIEAQEIDCAVHSLKDVPALRPPGVLTCAVLKRNSPADFLAVDAVEN------PQ 112
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IG+SS RR+A LLR + V RG ++TR+ KL + I+LA AG++RL +
Sbjct: 113 IIGSSSTRRRAQLLRHDPSLEVKQLRGNVDTRIRKLKAGEYDGIVLAEAGLQRLGLS-LK 171
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L +++F PSP QG + + + + L ++HE T V ERA + EL G C
Sbjct: 172 GKRLPVDEFVPSPNQGTVAVVCREDPSLIETLACALDHEGTRQDVVFERAVMEELGGGCF 231
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDAAQYIRFISNKNV 304
+ G + VLA DG + + + + +A IGR ++ + +
Sbjct: 232 VPEGVYCR-DG---HLIAEVLALDGSRYQRIEADPSDVREAREIGR----RLKVQAADLI 283
Query: 305 FN 306
+
Sbjct: 284 SD 285
>gi|18312026|ref|NP_558693.1| porphobilinogen deaminase [Pyrobaculum aerophilum str. IM2]
gi|25453025|sp|Q8ZYW7|HEM3_PYRAE RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|18159451|gb|AAL62875.1| porphobilinogen deaminase (hemC) [Pyrobaculum aerophilum str. IM2]
Length = 297
Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 8/298 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++ TR S L+L E + + V P + I + T GD + ++ L +IG KG+F
Sbjct: 3 LKVATRGSRLSLLQTEEFLAQIKAVE--PRVDFEIKIVKTTGDLVQDKPLFQIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ ++ GE D A+HS KD+P+++ GL ++ + R D +S L+ L +
Sbjct: 61 KEVNLAVLKGEADIAIHSLKDLPSEISPGLVLAGFSKRTLPYDAVVSAVGYDLESLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEK 183
++GTSS+RR + R D+ + RG ++TR+ K+ K A ++A AGI RL +
Sbjct: 121 LVGTSSVRRAEFIKSLRPDVRIEPLRGNVDTRVQKILQGKYDAAVMAAAGILRLYGESPP 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V +L E PP PGQG + +L+K + ER FL +
Sbjct: 181 VKLSLLRPELLPPPPGQGIVAAVVREGEGWLIDLLKKASDPRATVEALAEREFLKNVGAG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C A+ G A+ + + F AS GK F V G D + +GR AA+ I+ ++
Sbjct: 241 CHVAVGGTAFSRNGYIEFIAGYAAS-GKRFV-VKLFG--EDPVEVGRRAAEEIKRVAA 294
>gi|68068433|ref|XP_676126.1| porphobilinogen deaminase [Plasmodium berghei strain ANKA]
gi|56495675|emb|CAH94424.1| porphobilinogen deaminase, putative [Plasmodium berghei]
Length = 383
Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats.
Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 54/359 (15%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIG 59
K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ G
Sbjct: 14 ANKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFG 73
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL- 118
GKG+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S +SL
Sbjct: 74 GKGIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLR 133
Query: 119 -----------------------KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155
KD+ L I TSSLRR + + ++ + RG I
Sbjct: 134 DINKELSQKNITNNISSSSHVIDKDIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNIN 193
Query: 156 TRLNKLNNNKAHAILLAYAGIKRL----------------------------KKEKVIKE 187
TR+ KL N +I++A+ G++RL ++ +
Sbjct: 194 TRIAKLFNETFDSIIIAFCGLERLISKKVLGQIMKNNIKSKPYIINYKDISIDLSRLNIQ 253
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
LN P+ QG I + ++ NN + +++K IN+E + + ER FL ++DGSC
Sbjct: 254 KLNTNIMCPALCQGIIAVTSNKNNSEISQILKNINNEKSQIMGSIERTFLHKIDGSCTMP 313
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
I G+ + ++F I+ +G +++ + + I +AA+ I+ FN
Sbjct: 314 IGGYTKFSKNKIFFNAIINDINGLENYKIKVVRHLNNLDGIADEAAEKIKEKIGIEQFN 372
>gi|119480587|ref|XP_001260322.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181]
gi|119408476|gb|EAW18425.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181]
Length = 363
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 97/334 (29%), Positives = 139/334 (41%), Gaps = 39/334 (11%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT---LTEIGG----- 60
G R S LAL S L P I S GD L+++ G
Sbjct: 26 GCRKSELALVQTRWVTSKLGQTLD-PSPTFQIATGSAVGDADKQAPFAVLSKLTGGSDIG 84
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
K L+T E+E L++G++ C VHS KDMPT L + A RED D S
Sbjct: 85 KSLWTNELELDLVAGKVHCLVHSLKDMPTTLPPHCLLGAVPEREDCSDAVCMRSDLKFTS 144
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAG 175
+ L S++GTSS RRKAL+ R + V++ RG ++TRL KL +++ ILLA AG
Sbjct: 145 IDQLPPGSIVGTSSSRRKALVRRNWPHLEVVECRGNVDTRLAKLDAPSSRFSCILLATAG 204
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL I L+ FP + GQGA+ +E + P ELV+ ++H+ + ERA
Sbjct: 205 LLRLGLGHRITHRLDDSIFPYAVGQGALGLEVSTDRPDILELVRHVDHKPSRWRGIAERA 264
Query: 236 FLAELDGSCKSAIAGFAYCK----------------------GSTLYFYGIVLASDGKIF 273
L L G C S I + + G L +VL +G
Sbjct: 265 MLRSLQGGCSSPIGVQSSLEPLGKEENGSTEDDSQRGRDSSSGGNLSLRAMVLHIEGTSE 324
Query: 274 HEVSRNGNR---CDAINIGRDAAQYIRFISNKNV 304
+A +G A + + +
Sbjct: 325 IVAEDMATVRCDEEAELLGVSVANMLLAKGARGL 358
>gi|291295115|ref|YP_003506513.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
gi|290470074|gb|ADD27493.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
Length = 299
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 85/316 (26%), Positives = 138/316 (43%), Gaps = 40/316 (12%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IG R S LA A L + P I + +K +
Sbjct: 2 RVIVIGARASLLAQAQTRWVVERLKE--NWPETEFKIRTIQSKSASEQSAA--------- 50
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
E + + L E+D AV+S K +PT+ GL++ A R + R+ + +A+ L+DL
Sbjct: 51 --EALRQALGKREVDIAVYSLKYLPTQEAPGLRLVAVPKRMEPREALVGRSAKRLEDLPK 108
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+G +SLRRKA LL R D++V D G ++ RL+ L + A+++ A + RL
Sbjct: 109 GAVVGVNSLRRKAQLLAHRPDLNVCDLEGDVDDRLSALGTGEYDAMIIGAASLLRLDLRN 168
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA----- 238
I ++++ E P+PGQGA+ +E + A+EL +NH ++ ERAFL
Sbjct: 169 RIDQLIDPEVMLPAPGQGALGLEVRQGDDWAEELAYSLNHRASFVRTTAERAFLRALGAG 228
Query: 239 ---------ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
L+G TL G+V + DG G+ +A +G
Sbjct: 229 DGCAAAALATLEG-------------DDTLLLQGVVASPDGHELIRAEIEGDAEEAAELG 275
Query: 290 RDAAQYIRFISNKNVF 305
D AQ + + +
Sbjct: 276 HDLAQDLLAEGGRELL 291
>gi|294815172|ref|ZP_06773815.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|294327771|gb|EFG09414.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
Length = 333
Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 11/308 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GK 61
+ +G+R S LA A E L + + P + GDR TL+ + G
Sbjct: 7 TYFVGSRASNLAKAQVREYLRPLRE--RFPEITFTHRVILEGGDRDRTSTLSAVSAVNGG 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
F+ E L G++D VHS KD+PT GL + RED+RD +L L
Sbjct: 65 SAFSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDALC---GSTLAGL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++RL
Sbjct: 122 RKGARVGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRRLGL 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNN--PKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L ++ FPPSPGQGA+ I+ ++ ++L+ + +V ERA LAE
Sbjct: 182 DDAIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERALLAE 241
Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C + +A L G V + DG+ + G + +G A +
Sbjct: 242 LHGGCSVPVGAYAEPLPNGELSLAGQVTSLDGRERVAGTLTGPATEPEKLGASLAALLID 301
Query: 299 ISNKNVFN 306
+ +
Sbjct: 302 RGAHAILD 309
>gi|159906164|ref|YP_001549826.1| porphobilinogen deaminase [Methanococcus maripaludis C6]
gi|159887657|gb|ABX02594.1| porphobilinogen deaminase [Methanococcus maripaludis C6]
Length = 304
Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 84/296 (28%), Positives = 134/296 (45%), Gaps = 11/296 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+FT
Sbjct: 3 LRIGTRGSTLAMIQTEYIAGLLNDL----GVETEIIIVKTTGDKDQNKKLVDLG-IGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQIAATPKRESPDDIIIWRKDSDFDIEHDEL 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR + L +++ RG + TR++KL + I++A AG+ R +
Sbjct: 118 NVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRKGEYDTIIMAKAGLIRQGIDLSE 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+E P+P QG I + + + K E+++ I + T+ ER L E G C+
Sbjct: 178 FNYKKLEI-LPAPAQGVIGVASRKADAKINEILEKICDKKTYIEATAERWALKEYGGGCQ 236
Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYI 296
+ FA + L ++ G I S G D + + ++ +
Sbjct: 237 APFGAFANYDTEAGILNLRCELVDEQGTIKRVKSNEGFIFCNTDDVELAKELGARV 292
>gi|254387445|ref|ZP_05002684.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|326443531|ref|ZP_08218265.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197701171|gb|EDY46983.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
Length = 329
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 11/308 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GK 61
+ +G+R S LA A E L + + P + GDR TL+ + G
Sbjct: 3 TYFVGSRASNLAKAQVREYLRPLRE--RFPEITFTHRVILEGGDRDRTSTLSAVSAVNGG 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
F+ E L G++D VHS KD+PT GL + RED+RD +L L
Sbjct: 61 SAFSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDALC---GSTLAGL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++RL
Sbjct: 118 RKGARVGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRRLGL 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNN--PKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L ++ FPPSPGQGA+ I+ ++ ++L+ + +V ERA LAE
Sbjct: 178 DDAIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERALLAE 237
Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C + +A L G V + DG+ + G + +G A +
Sbjct: 238 LHGGCSVPVGAYAEPLPNGELSLAGQVTSLDGRERVAGTLTGPATEPEKLGASLAALLID 297
Query: 299 ISNKNVFN 306
+ +
Sbjct: 298 RGAHAILD 305
>gi|150402047|ref|YP_001329341.1| porphobilinogen deaminase [Methanococcus maripaludis C7]
gi|150033077|gb|ABR65190.1| porphobilinogen deaminase [Methanococcus maripaludis C7]
Length = 304
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 11/297 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ L D+ I+ + T GD+ + L ++G G+F
Sbjct: 2 KLRIGTRGSTLAMVQTEYIAGLLNDL----GVETEIVIVKTTGDKDQTKKLVDLG-LGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 57 TKELDSKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDSDFDIEHDE 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSS+RR + L +++ RG + TR++KL N + I++A AG+ R +
Sbjct: 117 LDVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRNREYDTIIMAKAGLIRQGIDLS 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P+P QG I + + + K E+++ I + T+ ER L E G C
Sbjct: 177 EFNYTKLD-MLPAPAQGVIGVASRKADIKINEILEKICDKKTYIEATAERWALKEYGGGC 235
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296
++ FA + L ++ G I S G D + + ++ +
Sbjct: 236 QAPFGAFAVYDTEDGILNLRCELVDEQGTIKRVKSNEGFVICTTDEVELAKELGARV 292
>gi|47224902|emb|CAG06472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 49/334 (14%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LA L +++ P ++ I+ +ST GD+I + L++IG K L
Sbjct: 18 RVIRIGTRKSQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSL 75
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H ++L
Sbjct: 76 FTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDA 135
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L HSVIGTSSLRR A L + +DF+ + + L H + +R
Sbjct: 136 LPAHSVIGTSSLRRAAQLKKRFP---HLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGN 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+K++ EDF A +N + +++ ED +V E
Sbjct: 193 LNTRLKKLDEKEDFAAIILAAAGLRRMGWDN----RISQILEPEDCMYAVGQE------- 241
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS--------RNGNRCD-------- 284
G C +A K S LY G V + DG + + +G+ +
Sbjct: 242 -GGCSVPVAVHTKVKDSQLYLTGAVYSLDGSDSLKETMQTSVAAPADGSPDEVDECARVG 300
Query: 285 -------------AINIGRDAAQYIRFISNKNVF 305
A +G D A+ + K +
Sbjct: 301 VTANKIPGEAQDRAERLGVDLAKLLLSKGAKEIL 334
>gi|48477321|ref|YP_023027.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790]
gi|55976421|sp|Q6L2G8|HEM3_PICTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|48429969|gb|AAT42834.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790]
Length = 282
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 95/257 (36%), Positives = 142/257 (55%), Gaps = 10/257 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A + L + + ++KGD + L IGG G+F
Sbjct: 3 IRIGTRSSKLAMIQAMMVKDRLDSL----GIETEVKGFTSKGDINLDSPLYSIGGTGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++ + ++ EID AVHSAKD+P+ + L+ISA L R+D RDV IS SL DL S
Sbjct: 59 DDLNRMILKNEIDIAVHSAKDIPSFIDDSLEISAVLKRDDPRDVLISQH--SLNDLEASS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR L R+DI + D RG I+TRL KL+N I++A A R+ +
Sbjct: 117 VIGTSSLRRIKELKTLRNDILIKDLRGNIDTRLKKLDNGDYDGIIMAKAAYDRM-RINRR 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
ILN +DF P+P QG I I + + +++K IN ++T++ + ER L+ L+ C
Sbjct: 176 HFILNYDDFVPAPNQGIIAI-ISKKDSEINDVLKKINDDETYNDMKAERLILSGLNLGCS 234
Query: 246 SAIAGFAYCKGSTLYFY 262
+ +A+ + ++
Sbjct: 235 KPVGIYAH--KNRIFMR 249
>gi|297627045|ref|YP_003688808.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922810|emb|CBL57388.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 310
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 11/303 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ +IGTR S LA + + T + + V +P ++ + T GD + L+ G
Sbjct: 12 RRVLKIGTRGSRLARSQSAMTAALIEQVTGLP---TELVIVHTDGD-DLSIPLSAPPRPG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F + L+ GE+D AVHS KD+P + GL + A R D +S A L +L
Sbjct: 68 AFVARLRDVLLDGEVDIAVHSFKDLPFAPMPGLSVVAVPQRAAALDALVSRDALGLDELP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S +GTSS RR + LLR+R D+ ++ RG ++TR+ K+ + A +LA AG++RL
Sbjct: 128 AGSKVGTSSPRRASALLRYRDDLEIVPIRGNVDTRIRKVREGRVDAAVLAAAGLERLGLH 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+++ + P+P QGA+ +E ++P V IN DT V ER L +
Sbjct: 188 DEITELIDPKVIVPAPAQGALAVEMRTDDP-LAATVAQINDHDTRIQVAAERQVLTGVQA 246
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN------GNRCDAINIGRDAAQYI 296
+C +AI + +G +L + G V+R DA +G A+ +
Sbjct: 247 TCTTAIGAHSVLQGYSLTLMADLTDHMGVAHAHVARTIGLRRGDPTDDARALGESVAEQL 306
Query: 297 RFI 299
Sbjct: 307 LER 309
>gi|160937983|ref|ZP_02085340.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC
BAA-613]
gi|158438977|gb|EDP16732.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC
BAA-613]
Length = 302
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 94/300 (31%), Positives = 136/300 (45%), Gaps = 18/300 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL L V P + I+ T GDRI ++ L E GGKG+F
Sbjct: 4 IIRIGTRKSALALIQTQLVADELRQV--CPGIQVEIVTKDTLGDRILDKPLQEFGGKGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E E+ + G ID AVHSAKD+P +L +GL I+A RED RDV ++ ++
Sbjct: 62 VSEFEQAIQEGVIDLAVHSAKDLPMELAQGLTIAAVSGREDPRDVLVTMRGHRIRP-ESV 120
Query: 125 SVIGTSSLRRKALLLRWRS-------DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
IGTSS RR+ RG + TRL KL I+LA AG+K
Sbjct: 121 VRIGTSSPRRQLQARLMCKTLWPEAAGAECSTLRGNVHTRLRKLEEENFDGIILAAAGLK 180
Query: 178 RLKKEKVIKEILN---IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL + E+F P+ GQG + +E A L + ++H ++ ER
Sbjct: 181 RLGLLEQDTYEYTFLAPEEFIPAGGQGLMAVEAKAG-TAAHSLAQAMDHAQGRLCLDLER 239
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDA 292
+ L +LD C I ++ + L +G + + + + G +R D + +A
Sbjct: 240 SVLKQLDAGCHEPIGIYSVLQNGQLEVWG-ISSP-REEVKRIHLTGGTSRRDIEKLASEA 297
>gi|167814759|ref|ZP_02446439.1| porphobilinogen deaminase [Burkholderia pseudomallei 91]
Length = 240
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 135/230 (58%), Gaps = 2/230 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
I+ +L+++D P+ GQGA+ IE + ++ + +V ER
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAER 240
>gi|327539486|gb|EGF26101.1| porphobilinogen deaminase [Rhodopirellula baltica WH47]
Length = 315
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 89/313 (28%), Positives = 140/313 (44%), Gaps = 29/313 (9%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A L I+PL +KGD R + GLFT+ I++ L+ E
Sbjct: 1 MWQAEHVAKLLKKH----GFQTEIVPLVSKGDTDM-RPIDGTRQVGLFTKRIQQALVDDE 55
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-----------LKDLALHS 125
D AVHS KD+PT+ ++A PRE + D + L L +
Sbjct: 56 ADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLEPQTGAESPLDYLPQGA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+AGI RL+ +
Sbjct: 116 RVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHAGILRLEMTDLP 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +++ P+PGQGA+ IE ++ A + +N + ER L+EL G C
Sbjct: 176 HRLFPLDEMIPAPGQGALGIEVRSDDAGAMHAIANLNDAAARLAATAERKVLSELHGGCL 235
Query: 246 SAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGN---------RCDAINIGRDA 292
+ IA A + G+ L IV+++DG+ + +A +G
Sbjct: 236 APIACHAKLETSNHGTELCLRAIVMSADGEQRLQEDARITVQPNDADLHVAEAHELGTLV 295
Query: 293 AQYIRFISNKNVF 305
A+ +R +
Sbjct: 296 AKRLRDKGADKLI 308
>gi|326802537|ref|YP_004320356.1| porphobilinogen deaminase [Sphingobacterium sp. 21]
gi|326553301|gb|ADZ81686.1| Porphobilinogen deaminase [Sphingobacterium sp. 21]
Length = 546
Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 84/256 (32%), Positives = 139/256 (54%), Gaps = 10/256 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ IGTR S LAL A + L + + + T+GD I + L ++ GKG
Sbjct: 3 RTLIIGTRGSDLALWQANHVKDRLATI----GVQAELKVIKTQGDNIQHLRLDKLEGKGF 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QSLK 119
FT+E+E++L++ +ID AVHS KD+PT GL+I+A RED ++ I +
Sbjct: 59 FTKELEEELLAEKIDIAVHSHKDLPTANPPGLRIAAVSEREDPSELLIILKDCVDLKKRL 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR- 178
+ ++++GTSS RRKA LL +R D+ + D RG + TRL KL + K AI+LA AG++R
Sbjct: 119 SVKHNAIVGTSSNRRKAQLLAFRPDLEIEDLRGNVNTRLQKLRDEKYDAIMLAKAGVERL 178
Query: 179 -LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
L + EI+ + P+P QG + I+ ++ E+++ ++ +D +++ ER L
Sbjct: 179 KLDLSEFHVEIIPPTEIIPAPAQGVLAIQIRESDHTLYEVLQKLHQKDVAETIGVERKVL 238
Query: 238 AELDGSCKSAIAGFAY 253
+G C + +
Sbjct: 239 NLFEGGCHMPLGCYCR 254
>gi|221059912|ref|XP_002260601.1| Porphobilinogen deaminase [Plasmodium knowlesi strain H]
gi|193810675|emb|CAQ42573.1| Porphobilinogen deaminase, putative [Plasmodium knowlesi strain H]
Length = 449
Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats.
Identities = 97/374 (25%), Positives = 162/374 (43%), Gaps = 71/374 (18%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVI--IPLSTKGDRITNRTLTEIGGK 61
K IGTR SPLA+ + + R+ L K N+ I + T GD I ++ + GGK
Sbjct: 65 KEIIIGTRDSPLAIKQSEKVRTKLEAYFKKVNKNVKITLKSIKTMGDNILDQKVDLFGGK 124
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+E++++LI G++ VHS KD+P +L + +Q+S +L R+ I D F+S +L+D+
Sbjct: 125 GIFTKELDEELIKGKVHICVHSLKDVPMELPEQVQLSCFLKRDTINDAFLSVKYGTLEDM 184
Query: 122 ---------------ALH------------------------SVIGTSSLRRKALLLRWR 142
IGTSSLRR + +
Sbjct: 185 NKMKMANKMEEGSYQPKGMSQRVINQNVKRDNYEGDHYDNFIPTIGTSSLRRSSQIKYKY 244
Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL----------------------- 179
+++V + RG I TR+ KL N + AI++A G++RL
Sbjct: 245 KNVAVKNMRGNINTRIAKLCNGQYDAIIIAKCGLERLTTKKGIRNIIGGKNKVTPKNFLI 304
Query: 180 -------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
+ + +N P+ QG I + +H ++ +++K IN E N
Sbjct: 305 NYNNTEINLTSLHIQQINKRTIYPALCQGIIAVSSHKSDKYISDVLKNINDEKAQIMANI 364
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
ER+FL +++G+C I G+A + F ++ G+ + V G I A
Sbjct: 365 ERSFLYQIEGNCMMPIGGYAKIVNGEIVFNAVINDIHGREKYHVREVGKVESYNEIAVMA 424
Query: 293 AQYIRFISNKNVFN 306
A ++ + FN
Sbjct: 425 ATKMKEKIGTHRFN 438
>gi|217077158|ref|YP_002334874.1| porphobilinogen deaminase [Thermosipho africanus TCF52B]
gi|217037011|gb|ACJ75533.1| porphobilinogen deaminase [Thermosipho africanus TCF52B]
Length = 280
Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats.
Identities = 97/259 (37%), Positives = 134/259 (51%), Gaps = 8/259 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++GTR S LAL L K+ + +IP+ TKGD I + + EIGGKG+F
Sbjct: 2 KIKVGTRGSKLALIQTNMVVERLKS--KLSNVSFEVIPIKTKGD-IVKKPVGEIGGKGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+IEK L++GEID A+HS KDMP+K+ GL +++ L RED RDVF+ L L
Sbjct: 59 VSDIEKLLLNGEIDIAIHSMKDMPSKIPDGLYLTSVLKREDARDVFVGKKDFFL--LESG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS RR L R DI ++ RG ++TRL ++ + I+LA AG+KRL EK
Sbjct: 117 AKIGTSSKRRMLQLSILRPDIEIVPIRGNVDTRLKRI--GELDGIVLAAAGLKRLGLEKK 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243
I +IE P+P QG + +E E VK I DT ER L+
Sbjct: 175 ITNYFSIEQVVPAPCQGILALEFTSKFLPLFEKVKDEIVDPDTEFVSKIERKVLSISGFD 234
Query: 244 CKSAIAGFAYCKGSTLYFY 262
C + + L F+
Sbjct: 235 CNTPFGFYCEKNDDNLVFH 253
>gi|239624018|ref|ZP_04667049.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales
bacterium 1_7_47_FAA]
gi|239522049|gb|EEQ61915.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales
bacterium 1_7_47FAA]
Length = 301
Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 137/308 (44%), Gaps = 24/308 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL L P + ++ T GD+I ++ L E GG
Sbjct: 1 MSN-IIRIGTRKSALALIQTHLIADGLKRA--WPDIEVELVTKETLGDKILDKPLQEFGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F E E+ + G ID AVHSAKD+P +L +GL I+A R D RDV ++
Sbjct: 58 KGVFVSEFEQAMKEGAIDLAVHSAKDLPMELGEGLVIAAVSGRGDPRDVLVTMKGSPKD- 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSD-------ISVIDFRGKIETRLNKLNNNKAHAILLAY 173
H VIGTSS RR+ + +R ++ RG + TRL KL I+LA
Sbjct: 117 -REHIVIGTSSPRRQLEAVEYRGQLWPGAASLTCATLRGNVHTRLRKLEEGLYDGIILAA 175
Query: 174 AGIKRLKKEKVIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG++RL L+ F P+ GQG + +E + A L + I+ + +
Sbjct: 176 AGLERLDLLGNPSYDFKYLDPTVFIPAGGQGIMAVEAREGS-DAARLCQAIDSREGRLCL 234
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD------ 284
ER L LD C I ++ + +G + D ++ +S G +
Sbjct: 235 TLERMVLKLLDAGCHEPIGIYSNIMDGKMEVWG-ISRPD-RVTRRISLEGAVTEKELEAL 292
Query: 285 AINIGRDA 292
A+ GR
Sbjct: 293 ALQAGRGL 300
>gi|291295782|ref|YP_003507180.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
gi|290470741|gb|ADD28160.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
Length = 300
Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 140/268 (52%), Gaps = 12/268 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A + L + + ++ + T+GDR + R ++ G+G FT
Sbjct: 4 VRIATRGSRLALWQAGWVQQQLERLGA----QVELVVVETQGDRES-RPFAQMQGQGFFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-----AQSLKD 120
+ ++ +++ E D AVHS KD+P+ +GL+I+A RED R++ + A
Sbjct: 59 KAVQDAVLNWEADLAVHSFKDLPSARPEGLEIAAVPKREDPRELLLVRPEALDEAAPGLP 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++ GTS+ RR+A L + R D+ + + RG + TR++KL + AILLAYAG+KRL+
Sbjct: 119 LRSGALAGTSAARRQAQLRQLRPDLGLKELRGNVPTRVDKLRCGEYDAILLAYAGLKRLE 178
Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + ++L P+P QGA+ +E ++ + + L++ ++ +V ER +
Sbjct: 179 LDLSGLYTQVLPTTVLVPAPAQGALALECRSDDHRLKALLQPLDDPQARRTVEAERGLMQ 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
+L G C+ A+ A L
Sbjct: 239 KLAGGCQLALGALAQAGPQGLMLLAWYG 266
>gi|333025240|ref|ZP_08453304.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
gi|332745092|gb|EGJ75533.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
Length = 307
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 21/281 (7%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A + ++ + ++ ++ ++T GD + L IGG G+F + L+ G+
Sbjct: 1 MAQSGLVADAVREAT---GRSVELVEITTYGDT-SREHLARIGGTGVFVTALRDALLRGD 56
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
+D AVHS KD+PT +GL ++A RED RD I+ +L+ L + IGT S RR A
Sbjct: 57 VDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLERLPRGARIGTGSPRRMA 116
Query: 137 LL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
L DI + RG ++TR+N + + + A++LA AG+ RL + + L +
Sbjct: 117 QLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAGLNRLGRGGEVTAYLASD 176
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+PGQGA+ +E E + ++ T +V ERA LA L+ C + + A
Sbjct: 177 TVLPAPGQGALAVECPPG--PLAEALARLDDPRTRAAVTAERALLAALEAGCSAPVGALA 234
Query: 253 YCKG-----------STLYFYGIVLASDGKIFHEVSRNGNR 282
G + + G+V ++DG +++ G+
Sbjct: 235 DFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGHV 275
>gi|108804800|ref|YP_644737.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941]
gi|123069014|sp|Q1AUK3|HEM3_RUBXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108766043|gb|ABG04925.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941]
Length = 305
Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 7/302 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR SPLALA A + L + + + T DR + L+ I + +FT
Sbjct: 5 LVLGTRGSPLALAQAEACAAGLRAA----GFAVELRRIRTTSDRRPDDPLSVIDQRDVFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++++ L++GE+D AVHS KD+PT++ +G+ ++A R D D +S + L +
Sbjct: 61 RQLDEALLAGEVDLAVHSMKDVPTEVPEGIVLAAVAGRADPSDALVSEGGWGVDGLPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A LL R D+ V++ RG ++TR+ K+ A A++LA AG+ RL E V
Sbjct: 121 RVATSSLRRRAQLLHRRPDLRVVEIRGNVDTRIRKMRAGAAEAVVLARAGLVRLGLE-VP 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + P+ GQGA+ + +P+ +E+ + +N V ERA L L+G C+
Sbjct: 180 HAVIPHDVLLPAVGQGALAVAVRRGDPRLEEIRRALNDPAAEREVAAERALLRALEGGCR 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A G + G+V++ DG G + + R A + +
Sbjct: 240 VPVGARAVAGGRGVLLRGVVVSPDGAALCGGEERGEEPEEVG--RRLAARLLERGAAGIL 297
Query: 306 NF 307
F
Sbjct: 298 GF 299
>gi|289581680|ref|YP_003480146.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099]
gi|289531233|gb|ADD05584.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099]
Length = 378
Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 91/360 (25%), Positives = 151/360 (41%), Gaps = 60/360 (16%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+ TR S LA A + +L + + + ++ + T GD+I + + +G
Sbjct: 3 TRGTLRLATRGSTLARRQATLVKEALENRR----YEVELVTVETTGDQIRDELIHRLGKT 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G F E++++++ G++D A+HS KDMPT+ L +A R D I+ +L++L
Sbjct: 59 GAFVRELDERVLEGDLDGAIHSMKDMPTEQPDDLVTAAVPERGRPGDYLITPEGATLEEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-------------------- 161
+ +GTSSLRR+A LL R D++V RG ++TRL KL
Sbjct: 119 PQGATVGTSSLRRRAQLLSERPDLTVEPLRGNVDTRLEKLLAPSLQAEHEERSEADKERK 178
Query: 162 -------NNNKAH---------------------------AILLAYAGIKRLKKEK-VIK 186
+ AI+LA AG+ R + V
Sbjct: 179 GNTGEEDFEPEFDQTVDEWFDGLSELEKQALGREVETEYDAIVLAQAGLVRSGLDHYVDA 238
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ L F P+PGQGA+ + + A E+ I+H + ER LAEL G C +
Sbjct: 239 QELPTGTFVPAPGQGALAVTA-TDGETATEIQSAIDHPRSRVETTVERTVLAELGGGCIA 297
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
I +A +G ++ V DG+ +R+ + R+ AQ + +
Sbjct: 298 PIGIYAIVQGEYVHATVSVFNRDGEESVAATRDLPVENHATAAREFAQDLADRGAAELIE 357
>gi|323475281|gb|ADX85887.1| porphobilinogen deaminase [Sulfolobus islandicus REY15A]
gi|323478006|gb|ADX83244.1| porphobilinogen deaminase [Sulfolobus islandicus HVE10/4]
Length = 293
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIINIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAE--KNLDKLDSN 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL +
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303
S I +G FYGI SDGK VS + D IG + + + + N++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNED 290
Query: 304 VF 305
+
Sbjct: 291 II 292
>gi|227828214|ref|YP_002829994.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25]
gi|229585443|ref|YP_002843945.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27]
gi|259646265|sp|C3MZR8|HEM3_SULIA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|259709751|sp|C3MYD9|HEM3_SULIM RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|227460010|gb|ACP38696.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25]
gi|228020493|gb|ACP55900.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27]
Length = 293
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAE--KNLDKLDSN 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL +
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303
S I +G FYGI SDGK VS + D IG + + + + N+N
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNEN 290
Query: 304 VF 305
+
Sbjct: 291 II 292
>gi|229581489|ref|YP_002839888.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51]
gi|259709752|sp|C3NF70|HEM3_SULIN RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|228012205|gb|ACP47966.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51]
Length = 293
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLKRDPPYDILIAE--KNLDKLDSN 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL +
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303
S I +G FYGI SDGK VS + D IG + + + + N++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNED 290
Query: 304 VF 305
+
Sbjct: 291 II 292
>gi|118576540|ref|YP_876283.1| porphobilinogen deaminase [Cenarchaeum symbiosum A]
gi|118195061|gb|ABK77979.1| porphobilinogen deaminase [Cenarchaeum symbiosum A]
Length = 311
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 92/303 (30%), Positives = 137/303 (45%), Gaps = 6/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ +GTR S L+LA +L + + P + + T+GD +R L I KG+F
Sbjct: 4 YTVGTRGSRLSLAQTGHVLDALKEAN--PEDEYKVRRIKTQGDTD-DRPLFAIDQKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ + G D AVHS KD+PT+L GL ++ R DV +S L L +
Sbjct: 61 KEIDRAVSEGGADFAVHSLKDVPTELAPGLVLACVPRRAAANDVLVSPGGSGLGSLPRGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR + R RSD+ V RG IETR+ K+ A++LA AGI RL V
Sbjct: 121 TVGTSSLRRAVQVGRSRSDLHVKPVRGNIETRIAKVGAG-YDAVVLAEAGISRLGL-DVK 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L E F PSPGQG++ + + ++ I + ERA + C+
Sbjct: 179 YAALPEESFAPSPGQGSLALVARSGDAGTISMLNRIEDAASRAEAEAERALSERIGSGCR 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV- 304
+ A G L + DG V +G R +G A + ++
Sbjct: 239 FPVGALARSAGELLTIRAEAFSVDGSRSVSVQASGPRGSPRKVGESAGNEMLERGAGDLA 298
Query: 305 FNF 307
N+
Sbjct: 299 LNW 301
>gi|255513653|gb|EET89918.1| porphobilinogen deaminase [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 301
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 147/310 (47%), Gaps = 15/310 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLST---KGDRITNRTLTE 57
M + IGTR S LA+A A R+ L + P + I+ + T K DR RT
Sbjct: 1 MSESEITIGTRGSELAVAQAEIVRNKLAAIE--PRISFRIVKIKTLNEKVDRSKART--- 55
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
K ++T+EI++ ++ ID AVHS KD+ + + +QI A R+D RDVFI +T
Sbjct: 56 --EKDIYTKEIDEAILERRIDIAVHSLKDLKFNMDENMQIGAVPDRDDPRDVFIGNTETE 113
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ L +++GTSS+RR+ L R + D G I+TRL+KLN+ + I++A AG+K
Sbjct: 114 FEHLGTDALVGTSSIRRRVQLTRINPKPMISDLHGNIDTRLSKLNSGEFSGIVIAAAGVK 173
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + V + + D P+ GQGAI + H +N A EL+K I++ V E F
Sbjct: 174 RLG-KAVRMQYFDERDVVPAIGQGAIAVTVHKDNSAAAELLKRIDNMKARVEVGEEIEFG 232
Query: 238 AELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C I A + + G V GK + A G+ A+ +
Sbjct: 233 KAFGTGCNLPIGANAKMLESGKIGIVGFVSDLAGKTLVKGETETGPGHA---GKSLAELL 289
Query: 297 RFISNKNVFN 306
N+
Sbjct: 290 IKKGAGNLIE 299
>gi|227830973|ref|YP_002832753.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15]
gi|238620405|ref|YP_002915231.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4]
gi|284998461|ref|YP_003420229.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5]
gi|259709727|sp|C4KIZ9|HEM3_SULIK RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|259709750|sp|C3MJ21|HEM3_SULIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|227457421|gb|ACP36108.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15]
gi|238381475|gb|ACR42563.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4]
gi|284446357|gb|ADB87859.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5]
Length = 293
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAE--KNLDKLDSN 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL +
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303
S I +G FYGI SDGK VS + D IG + + + + N++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNED 290
Query: 304 VF 305
+
Sbjct: 291 II 292
>gi|1749684|dbj|BAA13899.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 335
Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 19/315 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GKGLF 64
IGTR S LA+ H R L P II T GD I ++ E K L+
Sbjct: 9 IGTRKSKLAVIHQNY-REELEK--HNPHLEFPIISRDTIGDEILSKAWLEFKRQLAKSLW 65
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L++ + VHS KD+P++ + I+ R D + +++ DL
Sbjct: 66 TRELEALLVTNQCRILVHSLKDLPSENARWYGIACIPKRSCPLDAIVFKAGSHYKTVADL 125
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
SV+GTSS+RR+ALL R + +D RG + TRL KL +++ ++LA AG+ RL
Sbjct: 126 PPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L + GQGA+ +E ++ + E++K + H++T + ERA +
Sbjct: 186 GLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKR 245
Query: 240 LDGSCKSAIA----GFAYCKGS-TLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRD 291
L G C I A S + G VL++DG + + +A +G
Sbjct: 246 LQGGCAIPIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGIT 305
Query: 292 AAQYIRFISNKNVFN 306
A + +
Sbjct: 306 VALALLKNGAGPILE 320
>gi|229579851|ref|YP_002838250.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14]
gi|259709753|sp|C3N841|HEM3_SULIY RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|228010566|gb|ACP46328.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14]
Length = 293
Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTDPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAE--KNLDKLDSN 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL +
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303
S I +G FYGI SDGK VS + D IG + + + + N++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNED 290
Query: 304 VF 305
+
Sbjct: 291 II 292
>gi|296534852|ref|ZP_06897187.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
gi|296264818|gb|EFH11108.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
Length = 304
Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats.
Identities = 113/309 (36%), Positives = 154/309 (49%), Gaps = 14/309 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R G+R SPLAL L + + P +PLST GD R L E+GGKGLF
Sbjct: 1 PLRAGSRASPLALRQTAMV---LAALGETPCLT---VPLSTSGDAEPRRRLAELGGKGLF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD---- 120
+EI + L+ G ID AVHS KD+ T+L GL I+A LPRED RD + A ++
Sbjct: 55 AKEIHEALLDGRIDFAVHSLKDLETELPPGLVIAACLPREDARDALLLAPACPPEERALP 114
Query: 121 ---LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L + + IGT+S RR A L R D+ RG ++TRL++L A LLA AG+K
Sbjct: 115 LGFLPVGARIGTASARRAAQLRHLRPDLRFGLLRGNVQTRLHRLEQGDFAATLLAMAGLK 174
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL IL+ E+ P+ GQG I I N +E + I+H T + ERA L
Sbjct: 175 RLDLAARASRILSPEEMLPAAGQGVIAITARAGNEALREKLAGIDHAATRLAAAAERALL 234
Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A L+GSC++ + A L+ G+V DG +G +A IG +
Sbjct: 235 AALEGSCRTPVGAHATLDAEGRLHLTGLVAREDGTFLLRRRLSGPASEAARIGATLGAEL 294
Query: 297 RFISNKNVF 305
R S ++
Sbjct: 295 RADSPADLL 303
>gi|726352|gb|AAC44323.1| porphobilinogen deaminase [Yersinia pestis]
Length = 184
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 83/186 (44%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIK 186
K
Sbjct: 179 LGKPNS 184
>gi|229822489|ref|YP_002884015.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333]
gi|229568402|gb|ACQ82253.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333]
Length = 334
Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats.
Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 23/294 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIP---PHNIVIIPLSTKGDRITNRTLTEI 58
+ R+GTR S LA + ++ + ++ ++T GD + +L +
Sbjct: 18 STRTLRVGTRASALATTQSEWAGEAIAARVAAATGSDVEVELVRVTTTGD-VLTGSLASM 76
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GG G+F + + L+ G D AVHS KD+PT GL + A RED RDV + L
Sbjct: 77 GGTGVFVTALREALLDGRCDVAVHSLKDLPTAAAPGLVLGAVPQREDPRDVLCARAGAGL 136
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
DL +GT S RR A L R R D+ ++D RG ++TRL++++ A++LA AG+
Sbjct: 137 ADLPAGGRVGTGSPRRAAQLRRARPDLEIVDIRGNVDTRLSRISPGKGDLDAVVLARAGL 196
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIET-HVNNPKAQELVKVINHEDTWDSVNCERA 235
RL + + E L+ P+PGQGA+ +E ++ + T +V ERA
Sbjct: 197 ARLGRLDAVTEALDAGVMVPAPGQGALAVEAVDAAPDWLLAGLRAFDDAPTRLAVTAERA 256
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LA L+ C + + A GS L V DA ++G
Sbjct: 257 MLARLEVGCSAPVGALATLAGSQLLLRTSVG----------------EDAEDLG 294
>gi|227496731|ref|ZP_03927005.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434]
gi|226833762|gb|EEH66145.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434]
Length = 402
Score = 251 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 88/377 (23%), Positives = 147/377 (38%), Gaps = 75/377 (19%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKG 62
R+GTR S LAL + L + ++ ++P+ T+GD L+++GG G
Sbjct: 3 TVRLGTRGSALALTQSGLVARMLEQAAALAGQELHVELVPVRTRGDVDP-TALSQLGGVG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDL 121
+F + + L++GE D AVHS KD+PT + GL+I+A RED RDV + A L DL
Sbjct: 62 VFATALREALLAGECDLAVHSYKDLPTAAVPGLRIAAVPAREDPRDVLCTRAATLGLHDL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NNNKAH 167
+ +GT S RR A LL R D++++ RG + TRL ++
Sbjct: 122 PAGARVGTGSPRRSAQLLAQRPDLTIVPIRGNVPTRLARVVGSVVSADGPMGATAEPDLD 181
Query: 168 AILLAYAGIKRLKKEKVIKEI---------------------------LNIEDFPPSPGQ 200
A +LA +G++RL E + P+ Q
Sbjct: 182 AAILALSGMRRLGLEDYASQPLAARCGARSQVEVQGIPDGGSAAGSPATTEPWMLPAAAQ 241
Query: 201 GAICIETHV----NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-- 254
GA+ +ET P + +++ T + ER+ + L C + + A
Sbjct: 242 GALAVETRDRVSCELPVLTVALALVDDPVTRACADAERSLMRCLAAGCAAPVGALARPLD 301
Query: 255 ------------------------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+ + +V + DG S G +A ++GR
Sbjct: 302 VAGEPAAGRDLPTEPGTALEPGPDQAPAICLEALVASLDGTQLRRASATGTLEEAEDLGR 361
Query: 291 DAAQYIRFISNKNVFNF 307
A+ + + +
Sbjct: 362 CVAERLLADGAAQITDL 378
>gi|300933794|ref|ZP_07149050.1| hypothetical protein CresD4_06949 [Corynebacterium resistens DSM
45100]
Length = 355
Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 12/282 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIG 59
++ IGTR S LA + ++ + + + + T GD + + + +IG
Sbjct: 26 SQRTLLIGTRRSQLATTQSGHVQAGITEQGWAS----ELHIVQTPGDASQASQIPVAQIG 81
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G+FTE + L + E D AVHS KD+PT R D R+V +S + LK
Sbjct: 82 -VGVFTETLRNALAAKECDVAVHSFKDLPTA-PDKRFRIIVPERVDPREVLVSVDNRLLK 139
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + +GTS+ RR + L R D+ ++ RG I++R+ ++ A++LA AG++R+
Sbjct: 140 DLPEGAKVGTSAPRRVSQLRAVRPDLEILPLRGNIDSRMGRVGT-DLDAVILARAGLERV 198
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E L+ P+P QGA+ +E ++ +A + V + H + ERA LA
Sbjct: 199 GQLDRAAESLDPHVIMPAPAQGALAVEVRADDDEAWQAVLPLEHLPSHLMAAAERAVLAT 258
Query: 240 LDGSCKSAIAGFAYCKGS---TLYFYGIVLASDGKIFHEVSR 278
L+ C + +A + GS L V DG +
Sbjct: 259 LEAGCSAPVAAHSEWTGSDHTELTISAGVFGMDGTKQLVDTV 300
>gi|164661463|ref|XP_001731854.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966]
gi|159105755|gb|EDP44640.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966]
Length = 530
Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats.
Identities = 91/391 (23%), Positives = 160/391 (40%), Gaps = 90/391 (23%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLM----------------------------------DV 30
+ +R S LA+ A + + L D
Sbjct: 89 TLVLSSRKSELAVRQATQVQMLLDTRYGRASPVFAPGADQWPSTEVANIRAFLRTFSPDQ 148
Query: 31 HKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG--LFTEEIEKKLISGEIDCAVHSAKDMP 88
+ P + + ++T GD+ L IGG+G ++T+E+E L++G +D VHS KD+P
Sbjct: 149 KDVRPVDFPVRTMATLGDQNLKSPLYVIGGEGRAIWTKELEVALMAGGVDAIVHSLKDVP 208
Query: 89 TKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145
T + G++++A L RED RD + +SL+++ SVIGTSS+RR +LL R +
Sbjct: 209 TTMPDGVELAAILEREDPRDALVVKENLPYKSLQEMPQGSVIGTSSVRRVSLLRRAYPHL 268
Query: 146 SVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
D RG I TRL KL+ + A++LA AG+KR+ E I ++ + GQG++
Sbjct: 269 MFSDVRGNINTRLAKLDAADGPYTALVLAAAGLKRMDLEHRITAYVSEPVMLHAVGQGSL 328
Query: 204 CIETH-------VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG------ 250
IE + + + +++ I++ ERA + ++G C +
Sbjct: 329 AIEVRTPRGESAERDERIRRMIRSISNWRATWRCVAERALMHRMEGGCSIPLGVSTRFED 388
Query: 251 FAYCK--------------------------------GSTLYFYGIVLASDGKIFHEVSR 278
A + GS L ++++ DG + S
Sbjct: 389 HADIEGLLNERNETPSEMASAGISRPDIRIAHEPPPQGSFLTMAAVIVSLDGTRMCKHSH 448
Query: 279 N---GNRCDAINIGRDAAQYIR-FISNKNVF 305
+ DA +G A+ + + + +
Sbjct: 449 TQLCRSEKDAEQLGILVAEELEHHQNARAIL 479
>gi|256833700|ref|YP_003162427.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603]
gi|256687231|gb|ACV10124.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603]
Length = 344
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 18/264 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A + T + + + + + T GD + +L +GG G+F
Sbjct: 4 LRLGTRASALATAQSRATAALIAQAT---GVTVDLTHIRTDGD-VLTGSLATMGGAGVFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I + L++G+ID AVHS KD+PT +G I RE+ +D S +SL L +
Sbjct: 60 TAIRQALLAGDIDIAVHSLKDLPTTPHEGTTII-VPERENPQDALCSRHGESLAHLPHGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------NNNKAHAILLAYAGI 176
++GT S RR A LL R D+ ++D RG ++TRL ++ N A++LA AG+
Sbjct: 119 LVGTGSPRRAAQLLVARPDLRIVDIRGNVDTRLARVGLSTADKPHIRNDLDAVVLAAAGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----NPKAQELVKVINHEDTWDSVNC 232
+RL + VI E+L P+PGQGA+ IE + +P ++ ++H+ T +V
Sbjct: 179 RRLGRAHVISELLPPTSMLPAPGQGALAIEVRHDMADHHPSILAGIRTLHHQPTAYAVAA 238
Query: 233 ERAFLAELDGSCKSAIAGFAYCKG 256
ERA L L+ C + + A
Sbjct: 239 ERAVLRHLEAGCAAPVGALATMHN 262
>gi|302349001|ref|YP_003816639.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15]
gi|302329413|gb|ADL19608.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15]
Length = 298
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 81/297 (27%), Positives = 149/297 (50%), Gaps = 7/297 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++ TR S L+L L + + T+GD + +R L IG KG+F
Sbjct: 3 KLKVATRGSKLSLEQVVIAMRFLEQRLG-ERVEYEPVIVKTRGDVMQDRPLFSIGVKGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----LKD 120
+E+ + +++GE D AVHS KD+P++L + L+I+ PRE D + ++D
Sbjct: 62 EKEVNRAVLNGEADVAVHSMKDLPSQLEEDLEIAMVPPREVPNDSLVIGAGSPEVTGVED 121
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +GTSS+RR A L + ++ RG ++TR+ KLN + + +L+A AG++RL
Sbjct: 122 VPSGLSVGTSSVRRIAFLRHYNRNVITKVVRGNVDTRIAKLNRGEVNYLLMAEAGLRRLN 181
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + +L ++ FPP PGQG I + ++P +L++ + E T+ ER F+ +
Sbjct: 182 IPQ-KRVMLPLDKFPPEPGQGIIAVVAPSSSP-LFDLLRRASDEVTYAMAMAERKFVELI 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + I + +G L + DG++ + +G+ + I R+ + ++
Sbjct: 240 GAGCHTPIGAVSILEGGRLAMIAAAASPDGEVMNFARASGSLGEPERIARELVENLK 296
>gi|103488353|ref|YP_617914.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256]
gi|123379466|sp|Q1GP41|HEM3_SPHAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|98978430|gb|ABF54581.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256]
Length = 315
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 8/304 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR SPLA+A A ++L+ H + + I+P++ GDRI +R L E+GGK L+
Sbjct: 10 PLRIGTRASPLAMAQAHMAAAALIAAHGLAMAALEIVPMTATGDRIQDRALAEVGGKALW 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121
T E++ L +G ID AVHS KD+ T + A L R D RD + Q + +L
Sbjct: 70 TRELDAALDAGTIDVAVHSLKDVETLRDARFFLGAMLERADPRDRLVVREGIAAQKISEL 129
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSS RR A + R R D+ + RG + TRL KL +A A LLA AG++RL
Sbjct: 130 PHGARLGTSSPRRAAQVRRLRPDLDTVLLRGNVATRLAKLAAGEADATLLAAAGLERLGM 189
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + E P+ QGAI IE ++ L+ I+H T +V ERA LA L
Sbjct: 190 HDIGA-VQGTELLLPAASQGAIGIECRADDAATIALLAAIDHAPTHRAVAAERALLAVLG 248
Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+S +A +A + L + + DG DA + + +
Sbjct: 249 GDCRSPVAAYAEWQADGVLRLDAEIFSEDGADHVAGHVI--VTDAGVVA-ALGHRLLAEA 305
Query: 301 NKNV 304
++
Sbjct: 306 PPSI 309
>gi|150020602|ref|YP_001305956.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429]
gi|149793123|gb|ABR30571.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429]
Length = 279
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 8/249 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LAL + L ++ +P + I P+ TKGDR + +IGGKG+F
Sbjct: 2 KIRVGTRKSKLALIQTQLVVNKLKEL--LPNIDFEITPVVTKGDR-LKTPIDKIGGKGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+IEK ++ ++D A+HS KD+P+K+ L +++ L RE DVFI ++ +L
Sbjct: 59 VSDIEKLILDDKLDIAIHSMKDLPSKIPDKLFLTSVLKRECPNDVFIGK--ENFFNLKKG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS RR + R DI ++ RG ++TR+ K+ + I++A AG+ RL +
Sbjct: 117 AKIGTSSKRRALQINMLRPDIEIVPIRGNVDTRIKKI--GELDGIVIAAAGVIRLGLKDK 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + E P+P QG + +E K +E+ VI T ER L+ L+
Sbjct: 175 ITNLFEFEKIVPAPCQGILALEFSEKFLKPFEEIKDVIVDPKTEVETQIERKILSLLNFD 234
Query: 244 CKSAIAGFA 252
C + +
Sbjct: 235 CNTPFGFYC 243
>gi|88854547|ref|ZP_01129214.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1]
gi|88816355|gb|EAR26210.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1]
Length = 290
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 11/292 (3%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A +L IIP+ST+GDR + +L+ IGG+G+F + L++GE
Sbjct: 1 MAQTTTVARALESKT---GVETEIIPISTQGDR-STESLSTIGGQGVFANALRDALLAGE 56
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D VHS KD+PT + GL I+A R D RDV + +L+ L + +GT S RR+A
Sbjct: 57 CDVVVHSLKDLPTAEVPGLTIAAVPKRADERDVVCARDGLTLETLPAGARVGTGSPRRQA 116
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L D+ V+D RG I++RL+K+ + A++LA AG+ R + + E L I +P
Sbjct: 117 QLRSLYPDLEVVDLRGNIDSRLDKVTDGHLDAVILAAAGLARAGRSDAVTEHLGIAGWPT 176
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+PGQGA+ IET K L V++H+ + + ER LA LD C + + A
Sbjct: 177 APGQGALAIETRTGEEK---LAAVLDHKPSRTKTDAERYVLAFLDAGCSAPLGAHAVIDD 233
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFISNKNV 304
L+ V A DG + S D A + A + ++
Sbjct: 234 GLLFLDARVYALDGSRYLTSSHALYVNDVEDPAREAAQRVADELLAQGAGDL 285
>gi|284166931|ref|YP_003405210.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511]
gi|284016586|gb|ADB62537.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511]
Length = 380
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 91/360 (25%), Positives = 151/360 (41%), Gaps = 60/360 (16%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+ TR S LA A + +L D + + ++ + T GD+I + + +G
Sbjct: 3 TRGTLRLATRGSTLARRQASLVKEALEDRR----YEVELVTVETTGDQIRDELIHRLGKT 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G F E++++++ G++D AVHS KDMPT+ + L +A R DV I+ +L++L
Sbjct: 59 GAFVRELDERVLEGDLDGAVHSMKDMPTEQPQDLVTAAVPERGPPGDVLITPDGSTLEEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-------------------- 161
+ +GTSSLRR+A LL R D+ V RG ++TRL KL
Sbjct: 119 PDGATVGTSSLRRRAQLLSERPDLEVEPLRGNVDTRLEKLLAPSLQEEHQERSEADKERK 178
Query: 162 -------NNNKA---------------------------HAILLAYAGIKRLKKEK-VIK 186
+ AI+LA +G++R V
Sbjct: 179 GNAGDDDYEPEYDRTVDEWFDDLSELERQAMEREVETEYDAIVLAQSGLERSGLAHSVDY 238
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L F P+PGQGA+ + + A+++ I+ + ER LAEL G C +
Sbjct: 239 RELPTGTFVPAPGQGALAVTAR-DGETARDIQSAIDFPRSRVETTVERTILAELGGGCIA 297
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+ +A +G ++ V DG+ E SR+ R+ A+ + +
Sbjct: 298 PVGIYAVVQGEYVHATVNVFDRDGEESVEGSRDLPVEAHAEAAREFARDLADRGAAELIE 357
>gi|312878897|ref|ZP_07738697.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260]
gi|310782188|gb|EFQ22586.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260]
Length = 301
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 94/286 (32%), Positives = 137/286 (47%), Gaps = 11/286 (3%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
TR SPLA +L + + +ST GDR L GG G F + +E
Sbjct: 5 TRGSPLARIQTRGWMDALESLGA----ETTLQAVSTHGDRDRTTPLPCFGGFGAFVKALE 60
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+KL++GE D AVHS KD+P +GL ++ LPR + D+ ++ SL+ L + +G+
Sbjct: 61 EKLLAGEGDGAVHSLKDVPVAQPEGLVLAGVLPRGPVGDLLVTREGLSLETLPPGARVGS 120
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189
SSLRR A LR R D+ + RG ++TRL KL + A++LA AG++RL + L
Sbjct: 121 SSLRRTAQGLRVRKDLRFLCCRGNVQTRLRKLEAGELDALILAEAGVRRLGLDLPGAVRL 180
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F +PGQGA+ +E + + L + NH TW V ER L C + +A
Sbjct: 181 P---FLSTPGQGAVALEARAGSV-LESLARQTNHLPTWLEVCGERQVLGAFGKGCSAPVA 236
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292
+G L VLA DG S G +A +G+
Sbjct: 237 VQGRYEGGVLTLEAEVLALDGSQSVGASLGGPAGTEEEARALGQTL 282
>gi|296131260|ref|YP_003638510.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109]
gi|296023075|gb|ADG76311.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109]
Length = 342
Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LAL + + + + + + T+GDR+ +L +GG G+
Sbjct: 3 QQVRIGTRASALALTQTGHVADA---LADLADLAVETVRVRTQGDRVR-ASLASLGGTGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L+ G D AVHS KD+PT GL ++A PR D RD + +L L
Sbjct: 59 FVTALRDALLDGRCDVAVHSLKDLPTGPADGLVVAAVPPRADARDALCARDGLTLATLPA 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------------- 161
+ IGT S RR A L R D+ V+D RG + TRL ++
Sbjct: 119 GARIGTGSPRRAAQLRALRPDVDVVDIRGNVGTRLGRVRGLDATTVATGSQVGPDAPHPG 178
Query: 162 -----NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK--- 213
A++LA AG+ RL + + E + P+PGQGA+ +E +
Sbjct: 179 VATDAPRGDLDAVVLAAAGLGRLGRLDAVTEWFAPDVLAPAPGQGALAVEVRTADAAADT 238
Query: 214 -AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
++ ++ T +V ERA LA L+ C + + + +T
Sbjct: 239 PLAHALRALDDPPTRRAVVAERAVLARLEAGCAAPVGAWGRVDDAT 284
>gi|268324707|emb|CBH38295.1| porphobilinogen deaminase [uncultured archaeon]
Length = 290
Score = 248 bits (635), Expect = 7e-64, Method: Composition-based stats.
Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 13/297 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L ++ I + + GD +T+R L E+ G+F
Sbjct: 1 MIVGTRGSNLALVQTKKVCERLSEL----GVECEIKTVQSLGDVMTDRGLYEMPTIGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++++ L+ +ID AVHS KDMP++ + L SA LPR+ D +S L D+ +
Sbjct: 57 KKLDMMLLDAKIDIAVHSMKDMPSEREEELDTSAVLPRDSPYDALVSR--YRLDDMPEGA 114
Query: 126 VIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
VIGTSS+RR+ L + + +++ D RG ++TR+ K + +++LA AG +RLK
Sbjct: 115 VIGTSSVRRRYQFLNYVGERGVKVTIKDIRGNVDTRIAKFRRGEYDSVILAEAGFERLKL 174
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ E L+ + F PSP QG I + + + E++K I+ +T E L +
Sbjct: 175 -DIEYERLDRDPFVPSPRQGIIAVVARRGSKE-SEILKQIDDSETRIEAEVEEEVLKVIG 232
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C + A KG ++ V ASD + E G R+ AQ +
Sbjct: 233 GGCSLPVGVHATAKGGSVELAVYVAASDVRYKLEKVVLGKDYYMEET-RELAQKFKS 288
>gi|291523525|emb|CBK81818.1| porphobilinogen deaminase [Coprococcus catus GD/7]
Length = 799
Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 97/305 (31%), Positives = 146/305 (47%), Gaps = 30/305 (9%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ ++ V P I I TKGDR +++L+ G KG FT+E+E ++ G
Sbjct: 1 MVQTEMAAEAIKKV--FPSIEIEIAGFETKGDRHLDKSLSAFGSKGAFTKELEGAMLDGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS--HTAQSLKDLALHSVIGTSSLRR 134
ID AVHSAKD+P +L +GL + A L R D RDV++S +++ +V+GT SLRR
Sbjct: 59 IDLAVHSAKDLPVELPEGLTVGAVLKRGDSRDVWVSLRREFSIIEECKEKTVVGTGSLRR 118
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK------------- 181
+ + + + D RG + TRL KL++ I+LA AG+KRL
Sbjct: 119 ALQIQQICPGVDIRDIRGNVPTRLKKLSDGMYDGIILAAAGLKRLGYLSEDCETEGSFEA 178
Query: 182 --EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ EIL+ E F P+ GQG I +ET + + + ++ I+ EDTW ER+FL
Sbjct: 179 EEQTFFYEILSKEQFLPAAGQGIIALETRQKDCE--DCMQAIHDEDTWQMFLTERSFLRA 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--------AINIGRD 291
+ G C A A G + DG E + G RC A+++G
Sbjct: 237 IGGGCNEAAAVDVRMDGQKVSVRARYA-GDGLHMKEKTVTGTRCGNIEEDRKLAVSLGEQ 295
Query: 292 AAQYI 296
A +
Sbjct: 296 MAARL 300
>gi|171185430|ref|YP_001794349.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta]
gi|229846306|sp|B1YDP0|HEM3_THENV RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|170934642|gb|ACB39903.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta]
Length = 296
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 93/301 (30%), Positives = 144/301 (47%), Gaps = 9/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F
Sbjct: 2 KIRVATRGSKLSLIQTEELLAQIKAVE--PDIRFEIVVVKTTGDLIQDKPLFQIGVKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D AVHS KD+P+ L GL ++ Y R D +S +L+ L
Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSDLTPGLALAGYSRRAPPNDALVSPRGYTLETLPRG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKE 182
+V+GTSS+RR L R D+ + RG ++TR+ K+ + + A ++A AG++RL
Sbjct: 120 AVVGTSSVRRAEFLKAARPDLEIKPLRGNVDTRVAKILSGQYDAAVMAAAGLQRLYGGAP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ L +ED PP PGQG + + +L++ + ERAFLAE+
Sbjct: 180 PIPAVPLAVEDLPPPPGQGIVAAVAREEDTWLTDLLRRASDRKAAAEAAAERAFLAEVGA 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C A+ G A + + F G H V G D +GR AA + + K
Sbjct: 240 GCHVAVGGIARQTPAGIEFTAGYA--QGGRKHLVKVYG--EDPTEVGRRAA-RLVAQAMK 294
Query: 303 N 303
Sbjct: 295 K 295
>gi|258567590|ref|XP_002584539.1| porphobilinogen deaminase [Uncinocarpus reesii 1704]
gi|237905985|gb|EEP80386.1| porphobilinogen deaminase [Uncinocarpus reesii 1704]
Length = 287
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 76/320 (23%), Positives = 128/320 (40%), Gaps = 60/320 (18%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K + IGTR SPLAL
Sbjct: 5 ERKTYTIGTRKSPLALVQTDLV-------------------------------------- 26
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118
+ L + +C + +PT++ + A +PRE+ RDV + +L
Sbjct: 27 -------RRALQTAYPNCDLKVHGHVPTQIPDACVLGAMMPRENPRDVLVIKKGLPWMTL 79
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL+ + +++A AG+
Sbjct: 80 AELPAGSVVGTSSVRRTAQLARHYPHLVVQDIRGNIDTRLAKLDAEDGPFTCLIMAAAGL 139
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R E + + L+ ++ + GQGA+ IE ++ +++V I T + ER
Sbjct: 140 LRTGHENRVTQYLDSKNGKMLHAVGQGALGIEVRTDDEVMKDMVNKIGDMPTTYACMAER 199
Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L ++G C + + L IV++ DGK E+ ++G+ +A
Sbjct: 200 NLLRTVEGGCSAPLGVETEWIQDDNGKSLLRLRAIVVSVDGKEAVELEKDGDVESIEEAE 259
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G+ A + +
Sbjct: 260 AFGKQVALELIDKGAGKILE 279
>gi|27377509|ref|NP_769038.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110]
gi|27350653|dbj|BAC47663.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110]
Length = 313
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 135/310 (43%), Gaps = 20/310 (6%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTEEIEKKLI 73
+ALA E L +P ++ I+ T GD L GGKG F +I ++
Sbjct: 1 MALAQTEEIARRLTAA--VPGLDVEIVKFDTTGDLDQTSKLLPHGGKGGAFVAQIRAAVL 58
Query: 74 SGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL----HSVIG 128
SGE+ A+HS KDMP + GL I A L R+ D + +L+ L IG
Sbjct: 59 SGELQAAMHSLKDMPGNEDTPGLVIGATLSRDPPSDALVLRDGVTLEALRQSRGKGFKIG 118
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AHAILLAYAGI 176
T+++RR A R D+ VI FRG +TR+ KL+N + A A+++A +G+
Sbjct: 119 TNAVRRAAYARRLFPDVEVIHFRGAADTRVRKLDNGEKQRLPDGGAVGPADALIMARSGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I + P+ GQG + +E + + ++++ I+ + ER
Sbjct: 179 DRVGLASRIAYEFTPAEMLPAAGQGIVAVECAAQDWQTRKILSSIDDPAAHACADAEREV 238
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L L+G C S +AGF+ G + VL G E SR G+ +GR +
Sbjct: 239 LWVLNGHCNSPVAGFSTIAGDQMSLTASVLDLSGNTIIEASRTGSANRPRELGRAVGLEL 298
Query: 297 RFISNKNVFN 306
+
Sbjct: 299 LGKGAAEIIE 308
>gi|232245|sp|P30527|HEM3_YERIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|48614|emb|CAA47276.1| hydroxymethylbilane synthase [Yersinia intermedia]
Length = 183
Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 76/184 (41%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + +D RD F+S + D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDPRDAFVSPHFAHIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++G SSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGNSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKV 184
Sbjct: 179 LASR 182
>gi|322371455|ref|ZP_08046004.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253]
gi|320548987|gb|EFW90652.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253]
Length = 366
Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/363 (23%), Positives = 158/363 (43%), Gaps = 63/363 (17%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + R+ TR S LA+ + E +++L D ++ ++ + T GD++ + +TE+
Sbjct: 1 MSNRGTELRLATRGSDLAIRQSGEVKAALEDRR----FSVELVEVETTGDQLDDALITEL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G F ++++++ E+D A+HS KDMPT L ++A R DV ++ + +
Sbjct: 57 GKTGAFVRNLDQEVLDEEVDGAIHSMKDMPTDHPDELVVAAVPERASANDVLVTPDGKPI 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA---------- 168
L +V+GTSSLRRKA LL +R D++V RG ++TR+ KL A
Sbjct: 117 DALPDGAVVGTSSLRRKAQLLNFRPDLTVKPLRGNVDTRIEKLLAPVLQAEHEERTEEEK 176
Query: 169 -------------------ILLAYAGIKRLKKEKVIKEIL-------------------- 189
I + + +++ + ++I
Sbjct: 177 ERKGHVGKKDSYEFPYDKTIDEWFNDLSEVERRALERDIETEYDGIVLAEAGLQRSGLAH 236
Query: 190 -------NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ F P+PGQGA+ + T ++ AQ+L V++H T ER L EL+G
Sbjct: 237 HVEYDRLPPKQFVPAPGQGALAVMT-LDGELAQDLHTVLDHPRTRVETTVERTILRELNG 295
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + I + +G ++ V + DG + R+ + + A+ + +
Sbjct: 296 GCIAPIGVHSIIQGENVHVEAQVFSQDGSEVISIKRDVPVETHVTGAKKVAEELADRGAR 355
Query: 303 NVF 305
++
Sbjct: 356 DLI 358
>gi|327329283|gb|EGE71043.1| hydroxymethylbilane synthase [Propionibacterium acnes HL103PA1]
Length = 315
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 83/309 (26%), Positives = 135/309 (43%), Gaps = 28/309 (9%)
Query: 26 SLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAK 85
+ + + ++ + ++T GD I+ +L +GG G+F I L+ GE D AVHS K
Sbjct: 1 MVARLLRSEGLDVDLTTITTHGD-ISTASLAAMGGIGVFASAIRATLLKGEADIAVHSFK 59
Query: 86 DMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145
D+PT GL I A R D RD ++ +L DL + +GT S RR A LL R D+
Sbjct: 60 DLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDL 119
Query: 146 SVIDFRGKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195
+++D RG ++TRL ++ A++LA +G+ RL + E L+
Sbjct: 120 TIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDPSVVL 179
Query: 196 PSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+P QGA+ +E + + + + I+ T + ERA L+ L+ C + I A
Sbjct: 180 PAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALA 239
Query: 253 YCK------GSTLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRF 298
K L +V DG + A +G AA+ +
Sbjct: 240 QLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEVDSALAAAHTLGVTAAEELLD 299
Query: 299 ISNKNVFNF 307
+V +
Sbjct: 300 DGAADVADL 308
>gi|152964587|ref|YP_001360371.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216]
gi|151359104|gb|ABS02107.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216]
Length = 326
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 12/299 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P R+GTR S LA + L + ++ ++T+GD L +IGG G
Sbjct: 2 TRPLRLGTRRSALATTQSSWVADLLRR----GGSPVELVEITTRGDVDR-APLAQIGGTG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L++GE+D AVHS KD+PT GL ++A RED RDV ++ +L DL
Sbjct: 57 VFVSALRDALLAGEVDLAVHSLKDLPTSAADGLALAAVPGREDPRDVLVAAGGATLADLP 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT S RR+ALLL R D+ V+ RG ++TR+ + A++LA AG+ R +
Sbjct: 117 RGARVGTGSPRRRALLLALRPDLDVVAVRGNVDTRIGFATGGELDAVVLAAAGLARTGRL 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E+ E F P+PGQGA+ +E ++ + + ++ +V ER LA L+
Sbjct: 177 HEASELFAPEVFVPAPGQGALAVECRADDAEVLAALAALDVPAVRWAVAAERQVLASLEA 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298
C + + A G L+ V DG + D A +G A +
Sbjct: 237 GCSAPVGAHA--AGGVLHV--AVEDPDGALVRRAVPAAGLDDEGAARRLGASVAADLLE 291
>gi|257387166|ref|YP_003176939.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286]
gi|257169473|gb|ACV47232.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286]
Length = 377
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 60/357 (16%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S LAL A +L + + I+ + T GD+I + + +G G F
Sbjct: 6 TVRLATRGSDLALRQAATVTETLEAR----GYTVEIVEVETTGDQIRDELIHRLGKTGAF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++++++ GE+D AVHS KD+PT+ + L ++ RE DV ++ ++ +L
Sbjct: 62 VRSLDEQVVDGEVDAAVHSMKDVPTEQPEELVVAGVPQRESPDDVLVTPDGATVDELPDG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------------- 161
+ +GTSSLRRKA LL R D+ V RG ++TR+ KL
Sbjct: 122 ATVGTSSLRRKAQLLAERPDLDVQPLRGNVDTRIEKLLAPTLQSEHEERSEAEKEQKEKV 181
Query: 162 NNNKA-------------------------------HAILLAYAGIKRLK-KEKVIKEIL 189
++ + A++LA AG++R V + L
Sbjct: 182 DDEEYEFPYEQDVETWFDGLTEIERQALGREVETAYDAVVLARAGLERAGLLHHVEYQSL 241
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F P+PGQGA+ + ++ A+EL ++H + ER L EL G C + +
Sbjct: 242 PTGTFVPAPGQGALAVTA-TDDEFARELNDALDHPRSRAETTVERTVLDELGGGCVAPLG 300
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
A +GS + VL G+ +R+ + ++ R A + ++
Sbjct: 301 VHAILQGSVIRTTVRVLDQAGEREVAATRDLSADRHVDDARAFAADLAEQGGADLIE 357
>gi|13676388|dbj|BAB41183.1| porphobilinogen deaminase [Amaranthus tricolor]
Length = 198
Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
+IGGKGLFT+EI++ L++ EID AVHS KD+PT L + + L RED+RD FIS TA
Sbjct: 1 ADIGGKGLFTKEIDEALLNNEIDIAVHSMKDVPTYLPDKIILPCNLEREDVRDAFISTTA 60
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYA 174
SL DL SV+GT+SLRRK+ LL + V+D FRG ++TRL KLN A LLA A
Sbjct: 61 SSLADLPAGSVVGTASLRRKSQLLHRYPSLEVLDNFRGNVQTRLRKLNEGLVQATLLALA 120
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+KRL + + +L+I+D P+ QGAI I ++ K + ++NHE+T +V CER
Sbjct: 121 GLKRLNMTENVSSVLSIDDMLPAVAQGAIGIACLQDDDKMANYLALLNHEETQLAVACER 180
Query: 235 AFLAELDGSCKSAIAGFA 252
AFL LDGSC++ IAG+A
Sbjct: 181 AFLETLDGSCRTPIAGYA 198
>gi|167823214|ref|ZP_02454685.1| porphobilinogen deaminase [Burkholderia pseudomallei 9]
Length = 233
Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 2/223 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
I+ +L+++D P+ GQGA+ IE + ++ +
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASA 233
>gi|313814512|gb|EFS52226.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA1]
gi|314922347|gb|EFS86178.1| porphobilinogen deaminase [Propionibacterium acnes HL001PA1]
gi|314965338|gb|EFT09437.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA2]
gi|314982570|gb|EFT26662.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA3]
gi|315091095|gb|EFT63071.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA4]
gi|315094182|gb|EFT66158.1| porphobilinogen deaminase [Propionibacterium acnes HL060PA1]
gi|315104838|gb|EFT76814.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA2]
Length = 315
Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 28/309 (9%)
Query: 26 SLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAK 85
+ + + ++ + ++T GD + +L +GG G+F I L+ GE D AVHS K
Sbjct: 1 MVARLLRSEGLDVDLTTITTHGDT-STASLAAMGGIGVFASAIRATLLKGEADIAVHSFK 59
Query: 86 DMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145
D+PT GL I A R D RD ++ +L DL + +GT S RR A LL R D+
Sbjct: 60 DLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDL 119
Query: 146 SVIDFRGKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195
+++D RG ++TRL ++ A++LA +G+ RL + E L+
Sbjct: 120 TIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDPSVVL 179
Query: 196 PSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+P QGA+ +E + + + + I+ T + ERA L+ L+ C + I A
Sbjct: 180 PAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALA 239
Query: 253 YCK------GSTLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRF 298
K L +V DG + A +G AA+ +
Sbjct: 240 QLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEVDSALAAAHTLGVTAAEELLD 299
Query: 299 ISNKNVFNF 307
+V +
Sbjct: 300 DGAADVADL 308
>gi|313765242|gb|EFS36606.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA1]
gi|313793133|gb|EFS41200.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA1]
gi|313821951|gb|EFS59665.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA1]
gi|313834370|gb|EFS72084.1| porphobilinogen deaminase [Propionibacterium acnes HL056PA1]
gi|314926611|gb|EFS90442.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA3]
gi|314931036|gb|EFS94867.1| porphobilinogen deaminase [Propionibacterium acnes HL067PA1]
gi|314969645|gb|EFT13743.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA1]
gi|314974711|gb|EFT18806.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA1]
gi|314980332|gb|EFT24426.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA2]
gi|314985507|gb|EFT29599.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA1]
gi|314987331|gb|EFT31422.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA2]
gi|315082096|gb|EFT54072.1| porphobilinogen deaminase [Propionibacterium acnes HL078PA1]
gi|315097342|gb|EFT69318.1| porphobilinogen deaminase [Propionibacterium acnes HL038PA1]
gi|315099447|gb|EFT71423.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA2]
gi|315106337|gb|EFT78313.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA1]
gi|327445624|gb|EGE92278.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA2]
gi|327447246|gb|EGE93900.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA1]
gi|327457080|gb|EGF03735.1| porphobilinogen deaminase [Propionibacterium acnes HL092PA1]
gi|328758364|gb|EGF71980.1| porphobilinogen deaminase [Propionibacterium acnes HL020PA1]
Length = 315
Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 28/303 (9%)
Query: 32 KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
+ ++ + ++T GD + +L +GG G+F I L+ GE D AVHS KD+PT
Sbjct: 7 RSEGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGEADIAVHSFKDLPTGR 65
Query: 92 LKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151
GL I A R D RD ++ +L DL + +GT S RR A LL R D++++D R
Sbjct: 66 PLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIR 125
Query: 152 GKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201
G ++TRL ++ A++LA +G+ RL + E L+ P+P QG
Sbjct: 126 GNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQG 185
Query: 202 AICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-- 256
A+ +E + + + + I+ T + ERA L+ L+ C + I A K
Sbjct: 186 ALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLKPVS 245
Query: 257 ----STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRFISNKNV 304
L +V A DG A +G AA+ + +V
Sbjct: 246 GKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAEELLDDGAADV 305
Query: 305 FNF 307
+
Sbjct: 306 ADL 308
>gi|315110126|gb|EFT82102.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA2]
Length = 315
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 28/303 (9%)
Query: 32 KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
+ ++ + ++T GD + +L +GG G+F I L+ GE D AVHS KD+PT
Sbjct: 7 RSEGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGEADIAVHSFKDLPTGR 65
Query: 92 LKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151
GL I A R D RD ++ +L DL + +GT S RR A LL R D++++D R
Sbjct: 66 PLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIR 125
Query: 152 GKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201
G ++TRL ++ A++LA +G+ RL + E L+ P+P QG
Sbjct: 126 GNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQG 185
Query: 202 AICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-- 256
A+ +E + + + + I+ T + ERA L+ L+ C + I A K
Sbjct: 186 ALAVECRTADSRHGKFAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLKPVS 245
Query: 257 ----STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRFISNKNV 304
L +V A DG A +G AA+ + +V
Sbjct: 246 GKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAEELLDDGAADV 305
Query: 305 FNF 307
+
Sbjct: 306 ADL 308
>gi|314964545|gb|EFT08645.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA1]
Length = 315
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 28/303 (9%)
Query: 32 KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
+ ++ + ++T GD + +L +GG G+F I L+ GE D AVHS KD+PT
Sbjct: 7 RSEGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGETDIAVHSFKDLPTGR 65
Query: 92 LKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151
GL I A R D RD ++ +L DL + +GT S RR A LL R D++++D R
Sbjct: 66 PLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIR 125
Query: 152 GKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201
G ++TRL ++ A++LA +G+ RL + E L+ P+P QG
Sbjct: 126 GNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQG 185
Query: 202 AICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-- 256
A+ +E + + + + I+ T + ERA L+ L+ C + I A K
Sbjct: 186 ALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLKPVS 245
Query: 257 ----STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRFISNKNV 304
L +V A DG A +G AA+ + +V
Sbjct: 246 GKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAEELLDDGAADV 305
Query: 305 FNF 307
+
Sbjct: 306 ADL 308
>gi|15920398|ref|NP_376067.1| porphobilinogen deaminase [Sulfolobus tokodaii str. 7]
gi|25453026|sp|Q976H1|HEM3_SULTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|15621180|dbj|BAB65176.1| 294aa long hypothetical porphobilinogen deaminase [Sulfolobus
tokodaii str. 7]
Length = 294
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 11/301 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S L+ + L + I + TK D N L+++G KG+F
Sbjct: 3 IRIAARGSKLSRIQVMMVENYLHKL----GIETEFIEIKTKADLFQNEPLSKLG-KGVFE 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ + ++ + D AVHS KD+ T++ + L+I A LPR+ D+ IS ++L +L +S
Sbjct: 58 KEVNQAVLDNKADVAVHSMKDILTEISENLEIYAVLPRDPPFDILISR--KNLFNLEPNS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSS+RRK L +R+D+++ D RG I+TRL K + I++A A I RL KE+V
Sbjct: 116 IIGTSSIRRKNFLTFYRNDLNIKDLRGNIDTRLKKYFEGQYDGIIIAEASIYRL-KEQVQ 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ F P QG I + + +++ IN +DT + ER L+ + G C
Sbjct: 175 YYRLDPHLFTPEANQGIIVVIGRKKDETIKKIFNEINDKDTLEIAIAERKALSIVGGGCH 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY-IRFISNKNV 304
S I + F+GI+ +S G+ + + G + + I N+ +
Sbjct: 235 SPIGVYFEKYDKD--FHGIISSSFGRKKITIEEYFHNMTPYEAGELLGKRFLEEIKNEGI 292
Query: 305 F 305
Sbjct: 293 I 293
>gi|260579339|ref|ZP_05847221.1| porphobilinogen deaminase (hydroxymethylbilanesynthase)
(Pre-uroporphyrinogen synthase) [Corynebacterium
jeikeium ATCC 43734]
gi|258602468|gb|EEW15763.1| porphobilinogen deaminase (hydroxymethylbilanesynthase)
(Pre-uroporphyrinogen synthase) [Corynebacterium
jeikeium ATCC 43734]
Length = 359
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 86/338 (25%), Positives = 142/338 (42%), Gaps = 43/338 (12%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGK 61
+ F IGTR S LA R + + + + T GD + +IG
Sbjct: 25 RTFLIGTRRSALATTQTSHVRDGMQSA----GYAAELHLVHTPGDASQAAQIPVAQIG-V 79
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FTE + K L +GE D AVHS KD+PT + R D R+V +S Q L +L
Sbjct: 80 GVFTETLRKALEAGECDVAVHSFKDLPTA-PDPRFRTVVPRRVDPREVLVSRNNQPLLEL 138
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTS+ RR + + R D+ ++ RG I+TR+ + A++LA AG++R+ +
Sbjct: 139 PQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGR-TEKDLDAVVLARAGLERVGQ 197
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L+
Sbjct: 198 LERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTLE 257
Query: 242 GSCKSAIAGFAYCKGST-----------LYFYGIVLASDGKIFHEVSRNG------NRCD 284
C + +A ++ L +G V A DG S D
Sbjct: 258 AGCTAPVAAYSEWVQQEGTAEGADKRYVLRVFGGVFAMDGSRKLVRSGEAGFDIPEPTAD 317
Query: 285 -----------------AINIGRDAAQYIRFISNKNVF 305
A IG D + + +
Sbjct: 318 EGFPAAEEPRWRECIAAARAIGIDIGRALLEDGAAELV 355
>gi|68536995|ref|YP_251700.1| hypothetical protein jk1901 [Corynebacterium jeikeium K411]
gi|68264594|emb|CAI38082.1| hemC [Corynebacterium jeikeium K411]
Length = 367
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 51/346 (14%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGK 61
+ F IGTR S LA R + + + + T GD + +IG
Sbjct: 25 RTFLIGTRRSALATTQTSHVRDGMQSA----GYAAELHLVHTPGDASQAAQIPVAQIG-V 79
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FTE + K L +GE D AVHS KD+PT + R D R+V +S Q L +L
Sbjct: 80 GVFTETLRKALEAGECDVAVHSFKDLPTA-PDPRFRTVVPRRVDPREVLVSRNNQPLLEL 138
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTS+ RR + + R D+ ++ RG I+TR+ + A++LA AG++R+ +
Sbjct: 139 PQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGR-TEKDLDAVVLARAGLERVGQ 197
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L+
Sbjct: 198 LERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTLE 257
Query: 242 GSCKSAIAGFAYCKGST-------------------LYFYGIVLASDGKI-FHEVSRNG- 280
C + +A ++ L +G V A DG S G
Sbjct: 258 AGCTAPVAAYSEWVQQEGTADGAVDGTVDGTEKHYVLRVFGGVFAMDGSRKLVRSSEAGF 317
Query: 281 ----NRCD-----------------AINIGRDAAQYIRFISNKNVF 305
D A IG D + + +
Sbjct: 318 DISEPTADEGFPAAEEPRWREYIDAARAIGIDIGRALLEDGAAELV 363
>gi|254445937|ref|ZP_05059413.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235]
gi|198260245|gb|EDY84553.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235]
Length = 291
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 15/262 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ + I TR SPLA+A + +P I + T GD+ +L + GGKGL
Sbjct: 6 REYVIATRKSPLAMAQTHLAKELFQR--GMPDAVFRIEKMVTTGDKRQEWSLEKQGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E L+ G D AVHSAKD+P+++ KGL ++ +LPR+ DV I L
Sbjct: 64 FTKELEDALLEGRADFAVHSAKDLPSEMPKGLALAGFLPRQTCEDVLILRDGVESPKL-- 121
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180
I T S RR+ L + RG ++TRL K+ A A +LA AG+ RL
Sbjct: 122 ---IATGSPRRRIQLRYLFPKAEFTEIRGNVDTRLTKIARGDADATVLASAGLNRLGIES 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V L +++ P+ GQ A+ I+ + E+T +VN ER+FL EL
Sbjct: 179 WEGVTFRKLTLDECVPAVGQAAVAIQCREEDVDTFRAHL---DEETAIAVNLERSFLEEL 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFY 262
G C+ A A G L Y
Sbjct: 236 GGGCQVAFAVN--YVGGRLRIY 255
>gi|146303002|ref|YP_001190318.1| porphobilinogen deaminase [Metallosphaera sedula DSM 5348]
gi|189028093|sp|A4YD92|HEM3_METS5 RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|145701252|gb|ABP94394.1| hydroxymethylbilane synthase [Metallosphaera sedula DSM 5348]
Length = 290
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 16/299 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+L + L + I + TK D N+ L EIG KG+F
Sbjct: 2 KIRIAARGSKLSLKQVEIVTTYLQAK----GYETEFIEIKTKADLFGNKPLHEIG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G D AVHS KDM ++L GL++ A RE+ DV +S +L++L
Sbjct: 57 EKEVNEAVLQGRADIAVHSMKDMSSELPPGLELLATPKRENPVDVLVSE--LNLEELPEK 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGT SLRR L R D+ V + RG ++TRL K +++ I+LA AG++RL E V
Sbjct: 115 SRIGTGSLRRANFLKVVRPDLVVENIRGNVDTRLRKYRDHEYDGIILAEAGLRRLGVE-V 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L++E F P P QG I + +PK L + +N T E+ + + G C
Sbjct: 174 KRFPLDVESFTPEPNQGIIAVV---GSPKFLGLFQELNDTGTMKEALAEKETVKVVGGGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFIS 300
S + + L+ GI S+G V +R + +G+ + ++
Sbjct: 231 HSPLGVLFRLEDDVLH--GIASYSNGVKRVTVKLSTRESPQIAGNQLGKALVKAMKDEG 287
>gi|15897134|ref|NP_341739.1| porphobilinogen deaminase [Sulfolobus solfataricus P2]
gi|284174377|ref|ZP_06388346.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2]
gi|25453029|sp|Q980U4|HEM3_SULSO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|13813317|gb|AAK40529.1| Porphobilinogen deaminase [Sulfolobus solfataricus P2]
gi|261601798|gb|ACX91401.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2]
Length = 293
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 12/302 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I R S L+ L + +I + TK D + L+++G KG+F
Sbjct: 2 KILIAARGSKLSRVQVDMVGEKLRKI----GIEYDVIDIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A + R+ D+ I+ ++L L +
Sbjct: 57 EKEVNEAVLEGKADVAVHSMKDILSEINPELEIFAVIERDPPYDILIAE--KNLHKLDPN 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS+RRK + R +I+ D RG ++TR+ K + + ++LA A IKRL +
Sbjct: 115 TTIGTSSIRRKNFIKYIRPEINTKDIRGNVDTRIRKYLSKEYDGLILAEASIKRLNIS-I 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + + K +E+ K I H+DT D ERA ++ + G C
Sbjct: 174 SYHRLNVYDFTPEANQGIIVVLGRKKDEKVKEVFKEITHKDTLDEALAERATISVVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303
S I +G FYGI SDGK VS + D IG + + + + N+
Sbjct: 234 HSPIGVLFRKEGKE--FYGIASYSDGKKKITVSIS-KAGDPYTIGSELGLLLKKEMKNEG 290
Query: 304 VF 305
+
Sbjct: 291 II 292
>gi|311895212|dbj|BAJ27620.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 304
Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats.
Identities = 95/303 (31%), Positives = 133/303 (43%), Gaps = 10/303 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIGGKG 62
+G+R S LA A E + L + P + GD L +E GG
Sbjct: 4 LVVGSRASQLARAQVKEFLAPLRA--RFPEVAFRHRVILEDGDLDRKSDLRAVSERGGGS 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F L+ E+D VHS KD+PT GL + PR D+RD L L
Sbjct: 62 AFAGRQAAALLDREVDVVVHSLKDLPTADPDGLLLLPSPPRADVRDALC---GAPLAGLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTS+ RR A LL R D++ RG + TRL +L A++LA AG+ RL ++
Sbjct: 119 TGARVGTSAARRIAQLLYVRPDLAPERIRGNVPTRLTRLRT--LDAVVLAAAGLHRLGRD 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+L + FPPSPGQGA+ I+ ++ A+EL+ T V ERA LAEL G
Sbjct: 177 GEIAELLPLAQFPPSPGQGALGIQVRADDAMARELLAGTGDPVTDAEVRAERAMLAELHG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + A L +G V G E +G +GR A + +
Sbjct: 237 GCSVPVGAHATTADGILTLHGQVTTPRGTRQIEARLSGTSAAPEKLGRAVAGLLLDQDAE 296
Query: 303 NVF 305
+
Sbjct: 297 CLL 299
>gi|88603799|ref|YP_503977.1| porphobilinogen deaminase [Methanospirillum hungatei JF-1]
gi|88189261|gb|ABD42258.1| hydroxymethylbilane synthase [Methanospirillum hungatei JF-1]
Length = 295
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 88/303 (29%), Positives = 139/303 (45%), Gaps = 20/303 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA A A + + L D+ + ++ +ST GD T L EIGG+G+F
Sbjct: 2 PLRVGTRASELAKAQAVKVCTMLEDL----GVDTELVFISTAGDEQTGVPLHEIGGQGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++ L+ +ID AVHS KD+P + GL SA L R+ D ++ +L
Sbjct: 58 VRALDDALVQNKIDLAVHSMKDIPAERPYGLVTSAILARDSPCDYIVTDH-----ELDEI 112
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS RR A R + RG + TRL+KL + + AI+LA AG++RL +
Sbjct: 113 TTLGTSSTRRTAQCRRNLPWADIRPLRGNVNTRLSKLQSGEYDAIMLAKAGLERLSMT-L 171
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L+ PSP QG I + + +P +++ I+ T ER + + G C
Sbjct: 172 DGYQLDPRVHVPSPNQGTIAVVSRT-DPDVTDIISKIDDPKTRMDTLLERRVMEMIGGGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-NGNRCDAINIGRDAAQYIRFISNKN 303
+ + + L VL+ +G + R + DA G + R +
Sbjct: 231 FTPLGIYCK---DRL-MIAEVLSLEGDRHFRLERLVSDIDDADRFGLEV----RERAGDL 282
Query: 304 VFN 306
+
Sbjct: 283 IRE 285
>gi|295836866|ref|ZP_06823799.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197699525|gb|EDY46458.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 335
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 131/308 (42%), Gaps = 14/308 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIG 59
+ +G+R S LA A E ++P V ++ GD + +T
Sbjct: 31 RTVTVGSRGSALARAQVREMVERWER--EVPGVRFVRRVITEAGDADRSTPTVAGVTRRA 88
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL-PREDIRDVFISHTAQSL 118
G F+ E L+ E+D VH KD+PT G + PRED RD +L
Sbjct: 89 GVSAFSSRQEAALVRREVDVVVHCLKDLPTTPAPGTALLRTPGPREDARDALC---GATL 145
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + +GT S RR A LL R D+ VI RG + RL +L A++LA AG+ R
Sbjct: 146 AGLPRGARVGTGSTRRVAQLLALRPDLEVIPVRGNVPARLARLRT--LDAVVLAAAGLHR 203
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I E L+ E +PP+PGQGA+ I+ + A+ L+ T V ER LA
Sbjct: 204 LGLTEEITEYLDPEAYPPAPGQGALAIQVREGSGAAR-LLAASGDPATDTEVRAERVLLA 262
Query: 239 ELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL G C + + + TL + V A DG + G + + A+ +
Sbjct: 263 ELHGGCSVPLGTWTSRPSPGTLRLHAAVTAPDGGRQITATAQGPASEPDKLALTVAERLL 322
Query: 298 FISNKNVF 305
+
Sbjct: 323 AGGAARIL 330
>gi|123210216|emb|CAM15096.1| hydroxymethylbilane synthase [Danio rerio]
Length = 247
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 125/232 (53%), Gaps = 6/232 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K
Sbjct: 18 ASRVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEK 75
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L
Sbjct: 76 SLFTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTL 135
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIK 177
L SVIGTSSLRR A L + + + RG + TRL KL+ AI+LA AG+K
Sbjct: 136 DSLPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLK 195
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
R+ E I ++L ED + GQGA+ +E + E+V V++H DT
Sbjct: 196 RMGWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLR 247
>gi|330835713|ref|YP_004410441.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4]
gi|329567852|gb|AEB95957.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4]
Length = 289
Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 91/299 (30%), Positives = 135/299 (45%), Gaps = 17/299 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L++ S L + I + T+ D + L EIG KG+F
Sbjct: 2 KVRIAARGSRLSVKQVETVSSYLNSR----GYETEFIEVKTRADLFSGTPLHEIG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ + L +GL+I A RE+ DV +S L+++
Sbjct: 57 DKEVNEAVLIGKADLAVHSMKDL-SALPEGLKILATPRRENPSDVLVS--DYELQEMPAG 113
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGT SLRR L R D+ VI+ RG ++TR+ K + I+LA AG+ RL V
Sbjct: 114 SKIGTGSLRRTNFLKVLRPDLQVINLRGNVDTRIRKYLTREYDGIILAEAGLVRLGI-NV 172
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L++ DF P QG I I P EL+K +N E T ER + + G C
Sbjct: 173 KRHELDVHDFTPEANQGIIAIVGR---PHLTELLKELNDEATMTVARAEREVVKVIGGGC 229
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFIS 300
S + + GI SDG S + +GR + ++
Sbjct: 230 HSPLGVLFQMEDD--RLTGIASYSDGIRRVSASVSVMDSPEAAGQALGRALLKEMKNAG 286
>gi|319440758|ref|ZP_07989914.1| hypothetical protein CvarD4_03233 [Corynebacterium variabile DSM
44702]
Length = 336
Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 89/335 (26%), Positives = 141/335 (42%), Gaps = 38/335 (11%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
+ IGTR S LA R +L+D + + T GD ++ IG
Sbjct: 2 TRTLLIGTRASALASTQTGMVRDALVDNGATADLHF----VHTPGDASQKAQTPVSRIG- 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FTE + L +GE D AVHS KD+PT I+ PR D R+V +SH +L++
Sbjct: 57 VGVFTETLRNALAAGECDVAVHSFKDLPTA-PDPRFIAVVPPRVDPREVLVSHGNLTLRE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-----------KAHAI 169
L + IGT + RR + + R D+ I RG I+TR+ + + A+
Sbjct: 116 LPTGAKIGTGAPRRVSQIRAVRPDVECISIRGNIDTRMGRAGDGTTSTVVEGGPGDLAAV 175
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AG++R+ E + + D P+P QGA+C+E ++ +A V ++ +
Sbjct: 176 VLARAGLERVGHLDHAAETVAVTDIMPAPAQGALCVEVRADDAEAVAAVLGLDDPASHAR 235
Query: 230 VNCERAFLAELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGK--IFHEVSRNGNRC 283
ER LA L+ C + + ++ + L A DG + E S +
Sbjct: 236 AVAERGVLATLEAGCTAPVGAYSEFGTAEDAAILTLQAGAFALDGSTRVVREASVTIDLS 295
Query: 284 D-------------AINIGRDAAQYIRFISNKNVF 305
D A +GR Q + V
Sbjct: 296 DVGADPLHPRWRDAARELGRTVGQKLLDAGAAEVI 330
>gi|333024831|ref|ZP_08452895.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
gi|332744683|gb|EGJ75124.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
Length = 308
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 14/311 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LT 56
M + +G+R S LA A E ++P V ++ GD + +T
Sbjct: 1 MVESVVTVGSRGSALARAQVREMVERWER--EVPGARFVRRVITEAGDADRSTPTVAGVT 58
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL-PREDIRDVFISHTA 115
G F+ E L+ GE+D VH KD+PT G + PRED+RD
Sbjct: 59 RRAGASAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDALC---G 115
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+L L + +GT S RR A +L R D+ V+ RG + RL + A++LA AG
Sbjct: 116 ATLAGLPTGARVGTGSTRRVAQMLALRPDLEVVPVRGNVPARLARTRT--LDAVVLAAAG 173
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER
Sbjct: 174 LHRLGLADEITEYLDPEAYPPAPGQGALAIQVRE-DSEAARLLAASGDAATDAEVRAERV 232
Query: 236 FLAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
LAEL G C + + + + L + V DG + G + + A+
Sbjct: 233 LLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPAEEPEKLALTVAE 292
Query: 295 YIRFISNKNVF 305
+ +
Sbjct: 293 RLLAQGAARIL 303
>gi|332796306|ref|YP_004457806.1| porphobilinogen deaminase [Acidianus hospitalis W1]
gi|332694041|gb|AEE93508.1| porphobilinogen deaminase [Acidianus hospitalis W1]
Length = 292
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 11/292 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S L+ L + + I + TK D N L ++G KG+F
Sbjct: 2 IRIAARNSQLSQVQVKVVSDYLNKL----GYETEFIGVKTKADLFVNEPLYKLG-KGVFE 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ + +I G D AVHS KD+ + L + L I A + R+ DV +S + + DL S
Sbjct: 57 KEVNEYVIRGLADLAVHSMKDLTSNLSEELDILATVKRDSPYDVLVSK--KDVFDLDSGS 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RRK + R DI V D RG I+TR+ K + + I++A A I RL +
Sbjct: 115 VIGTSSIRRKNFMTFLRPDILVKDLRGNIDTRIKKYTSGEYVGIIIAEASILRLNL-NIN 173
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
LN DF P QG I + N+ + ++L+ ++ ++T++ ER+ + + G C
Sbjct: 174 YFKLNPIDFTPEANQGIIAVVGKKNDERTRKLLSELHDQETFNEAIAERSTMEIVGGGCH 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S + GI S+GK V+ + + ++G + + +
Sbjct: 234 SPFGVYFEQIDD--RLLGIASFSNGKKKITVTIE-RKGNPKDVGHELGKLLL 282
>gi|318057211|ref|ZP_07975934.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG]
gi|318079308|ref|ZP_07986640.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF]
Length = 314
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 85/306 (27%), Positives = 128/306 (41%), Gaps = 14/306 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIGGK 61
+G+R S LA A E ++P V ++ GD + +T G
Sbjct: 12 VTVGSRGSALARAQVREMVERWER--EVPGTRFVRRVITEAGDADRSTPTVAGVTRRAGA 69
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL-PREDIRDVFISHTAQSLKD 120
F+ E L+ GE+D VH KD+P G + PRED+RD +L
Sbjct: 70 SAFSSRQEAALVRGEVDVVVHCLKDLPNAPAPGTVLLRTPGPREDVRDALC---GATLAG 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A LL R D+ V+ RG + RL + A++LA AG+ RL
Sbjct: 127 LPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLARTRT--LDAVVLAAAGLHRLG 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER LAEL
Sbjct: 185 LADEITEYLDPEVYPPAPGQGALAIQVRE-DSEAARLLAASGDAATDAEVRAERVLLAEL 243
Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C + + + + L + V DG + G + + A+ +
Sbjct: 244 HGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPTAEPEKLALTVAERLLAQ 303
Query: 300 SNKNVF 305
+
Sbjct: 304 GAARIL 309
>gi|315654433|ref|ZP_07907341.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333]
gi|315491468|gb|EFU81085.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333]
Length = 373
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 91/348 (26%), Positives = 146/348 (41%), Gaps = 48/348 (13%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P IGTR S LAL S L ++ + +T+GD I +L +GG
Sbjct: 7 TERPLVIGTRASALALTQTRAVASDLEQR----GLHVQVQTFTTEGD-INRASLASLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL
Sbjct: 62 GVFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165
S +GT S RR + R DI ++D RG + TR+ ++
Sbjct: 122 PAGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEHAGLPSGKAAED 181
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---NNPK---AQELVK 219
++LA AG++RL + I + L P+ GQGA+ +ET ++ + +++K
Sbjct: 182 LDGVVLARAGLRRLGMDDAITDSLEGTV-IPAGGQGALALETRSELLDSDEGRNFAQILK 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAG--------FAYCKGSTLYFY-------GI 264
++ E T V+ ERA L L+ C + + L G
Sbjct: 241 FVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGIVTWDKHTEAPSGRLELTARVIGNQGE 300
Query: 265 VLASDGKIFH-----EVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
VL +G+ R+ A +G D A + + +
Sbjct: 301 VLEVNGETTVLLGAEAAQRDFALAAAEQLGVDLAGELLEAGAATIADL 348
>gi|298345857|ref|YP_003718544.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063]
gi|304390438|ref|ZP_07372391.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315657641|ref|ZP_07910523.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298235918|gb|ADI67050.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063]
gi|304326194|gb|EFL93439.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315492113|gb|EFU81722.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 373
Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 91/348 (26%), Positives = 146/348 (41%), Gaps = 48/348 (13%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P IGTR S LAL S L ++ + +T+GD I +L +GG
Sbjct: 7 TERPLVIGTRASALALTQTRAVASDLEQR----GLHVQVQTFTTEGD-INRASLASLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL
Sbjct: 62 GVFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165
S +GT S RR + R DI ++D RG + TR+ ++
Sbjct: 122 PAGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEQAGLPSGKAAED 181
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---NNPK---AQELVK 219
++LA AG++RL + I + L P+ GQGA+ +ET ++ + +++K
Sbjct: 182 LDGVVLARAGLRRLGMDDAITDSLEGTV-IPAGGQGALALETRSELLDSDEGRNFAQILK 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAG--------FAYCKGSTLYFY-------GI 264
++ E T V+ ERA L L+ C + + L G
Sbjct: 241 FVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGVVTWDKHTEAPSGRLELTARVIGNQGE 300
Query: 265 VLASDGKIFH-----EVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
VL +G+ R+ A +G D A + + +
Sbjct: 301 VLEVNGETTVLLGAEAAQRDFALAAAEQLGVDLAGELLEAGAATIADL 348
>gi|71005230|ref|XP_757281.1| hypothetical protein UM01134.1 [Ustilago maydis 521]
gi|46096460|gb|EAK81693.1| hypothetical protein UM01134.1 [Ustilago maydis 521]
Length = 770
Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats.
Identities = 83/239 (34%), Positives = 115/239 (48%), Gaps = 17/239 (7%)
Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGG--KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLL 92
PH I +ST GD+ L IGG K ++T+E+E L G +D VH KD+PT L
Sbjct: 248 PHAFPITSMSTAGDQNLRSPLYVIGGEGKAIWTKELEVALEQGAVDAIVHCLKDVPTALP 307
Query: 93 KGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
+GL+++A L RED RD + + L +L + SVIGTSS+RR A L R + D
Sbjct: 308 QGLELAAVLEREDPRDALVVKAGLPYKVLDELPVGSVIGTSSVRRVAQLRRRYPHLVFSD 367
Query: 150 FRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207
RG I TRL KL N A++LA AG+ RL I L+ S GQG++ IE
Sbjct: 368 VRGNINTRLAKLDAPNGPYTALILAAAGLVRLNMHARITAFLSSPVLLHSVGQGSLAIEV 427
Query: 208 HV----------NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ + +EL++ I ER+ L EL+G C +
Sbjct: 428 RTPPEGADPTTNRDARIRELIRSIGDWRATFRAEAERSLLKELEGGCSIPVGVETRFDD 486
Score = 41.3 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIR-FISNKNVFN 306
+G TL+ IV++ DG S + DA +G A + + +
Sbjct: 600 EGRTLHLDAIVVSLDGSQESRYSASKHCTTVKDARELGIHVAHELAHKKGARAILE 655
Score = 36.3 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK 32
+ +R S LAL + + L
Sbjct: 147 TLVLASRNSQLALVQSSHVSAMLEARFG 174
>gi|124805668|ref|XP_001350505.1| porphobilinogen deaminase [Plasmodium falciparum 3D7]
gi|23496628|gb|AAN36185.1| porphobilinogen deaminase [Plasmodium falciparum 3D7]
gi|70780284|gb|AAZ08393.1| porphobilinogen deaminase [Plasmodium falciparum]
Length = 435
Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats.
Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 59/363 (16%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITN-RTLTEIG 59
K IGTR SPLAL + + R +M K N+ + T GD I + +++ G
Sbjct: 59 KDEIIIGTRDSPLALKQSEKVRKKIMSYFKKMNKNINVTFKYIKTTGDNILDSKSVGLYG 118
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKG+FT+E++++LI+G +D VHS KD+P L +++S +L R+ I D F+S +S+
Sbjct: 119 GKGIFTKELDEQLINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFLSIKYKSIN 178
Query: 120 DLALHS------------------------VIGTSSLRRKALLLRWRSDISVIDFRGKIE 155
D+ IGTSSLRR++ + +I V + RG I
Sbjct: 179 DMNTVKSVSKTEDIHHINKKDSDHNNDTLCTIGTSSLRRRSQIKNRYKNIYVNNIRGNIN 238
Query: 156 TRLNKLNNNKAHAILLAYAGIKRL--------------------------------KKEK 183
TR+ KL N + A+++A GI+RL
Sbjct: 239 TRIEKLYNGEVDALIIAMCGIERLIKKANLKHLLKNKEQKNICQPFLLKCNNKKCIDLCH 298
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + LN P+ GQG I + +H N L+K IN++ + ER+FL +DG+
Sbjct: 299 VNIQKLNKNLIYPALGQGIIAVTSHKKNYFISSLLKNINNKKSEMMAQIERSFLYHIDGN 358
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C I G+ + +Y + I+ G ++V++ + IG +AA ++ I
Sbjct: 359 CMMPIGGYTNMRNEDIYLHVIINDIHGYNKYQVTQKDTLYNYKEIGPNAAIKMKEIIGTE 418
Query: 304 VFN 306
FN
Sbjct: 419 QFN 421
>gi|163839970|ref|YP_001624375.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209]
gi|162953446|gb|ABY22961.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209]
Length = 290
Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+A + L + + ++ + T GD + L+++GG G+F + + +++
Sbjct: 1 MARTQSQLIADQLSAIGGF---EVELVQIRTDGD-VLTGPLSQMGGTGVFVTALREAVLN 56
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
G +D AVHS KD+PT G++I+A R ++RD S + +SL +LA + +GT S RR
Sbjct: 57 GSVDFAVHSLKDLPTAAAPGMKIAAIPARAEVRDALCSRSNRSLAELATGAKVGTGSPRR 116
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
A L R+DI VID RG ++TRL +L N A++LA AG+ R+ + I E+ +
Sbjct: 117 AAQLRAARADIEVIDIRGNVDTRLARL-ENDLDAVVLAAAGLGRIGRSAAISELFDDAVM 175
Query: 195 PPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+PGQGA+ +ET ++ P + + I+ D+ +V ERA LA L+ C + + FA
Sbjct: 176 LPAPGQGALAVETALDVPTELAAALAAIDDADSRLAVTAERALLARLEAGCSAPVGAFAQ 235
Query: 254 CKGSTLYFYGIVLASDGKIFHE-VSRNGNRCD--AINIGRDAAQYIRFISNKNVF 305
KGS L + + DG + A +G + A+ + ++
Sbjct: 236 RKGSMLRLEACICSLDGSRVIRQAKATDGLAEVAATLLGIELAESMLADGAADLL 290
>gi|196232296|ref|ZP_03131150.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428]
gi|196223664|gb|EDY18180.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428]
Length = 307
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 16/279 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIGG 60
K +GTR S LA+A T +L P I T+GD+ + +L E GG
Sbjct: 2 KSIILGTRASALAVAQVELTTKALAAA--FPAMQIERREFVTRGDKKLDLSLLRANEAGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E L++G ID AVHS KD+P GL I+A L R DV I+ Q+L D
Sbjct: 60 KGLFTKELEDALLNGSIDVAVHSLKDLPGHNPPGLDITAVLERAPTADVLITKQPQTLLD 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L ++GTSS+RR L R D+ V ++RG ++TRL KL + I+LA AG++RL
Sbjct: 120 LPQGVLLGTSSVRRARQLQWRRPDVRVEEWRGNVQTRLRKLAERDDVTGIILAQAGLERL 179
Query: 180 KKE----------KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+ ED P+ GQGAI +++ + + +++ I+H +T +
Sbjct: 180 GHDLSAGRLETEHGKFYVTSLAEDLLPAIGQGAIALQSRADRAEVAAVLQKIDHRETHLA 239
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
+ ER L G C + + I+
Sbjct: 240 IRAERELQRLLAGDCALPVGVRTKLLPGGIAMRAILFGP 278
>gi|121591883|ref|ZP_01679047.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121546249|gb|EAX56552.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
Length = 195
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 97/184 (52%)
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E
Sbjct: 5 SGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELE 64
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L G
Sbjct: 65 SRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQG 124
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I +A +G T++ +V DG G R A +G A+ + K
Sbjct: 125 GCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGAK 184
Query: 303 NVFN 306
+
Sbjct: 185 EILE 188
>gi|284047684|ref|YP_003398023.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731]
gi|283951905|gb|ADB46708.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731]
Length = 288
Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 133/296 (44%), Gaps = 16/296 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K + TR S LALA L + I ++T GDR L +IGG+G+
Sbjct: 2 KKLIVATRGSRLALAQTHIVCRLLEEA----GVETEIRTITTAGDRDRIHALVKIGGRGI 57
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F EIE++L+SGE D AVHSAKD+P +L GL I+ + D RD + + L
Sbjct: 58 FVREIERELLSGEADIAVHSAKDLPYQLASGLVIAGTPSQADPRDALVLLKERK---LEA 114
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GT S RR + R ++ D RG + TRL+KL + AI+LA AGI+RL +
Sbjct: 115 GSVVGTGSPRRIREISRVLPELVFRDIRGNVTTRLHKLERGEYDAIVLAMAGIQRLALDM 174
Query: 184 VIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+I E P+ QG I +E + + L++ I+ +TW ER +
Sbjct: 175 EQFQIRPLSTEQVIPAGCQGIIGVECRQKDRELVRLLQQISDPETWRRFQWERQLFTSMK 234
Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + K + +V DGK + G + + + +
Sbjct: 235 VDCSRPVGIHCRLLKSGRMELLAMV---DGKRARRL---GMEKEGKALCASLKEEL 284
>gi|301167270|emb|CBW26852.1| putative porphobilinogen deaminase [Bacteriovorax marinus SJ]
Length = 512
Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK ++IGTR S LA+ + + L + + + T+GD IT++ L ++ G
Sbjct: 1 MSKKIYKIGTRGSLLAVTQCTQVKEELEKLT---GDQFELEIIKTQGDLITDKPLWQLDG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K FT+E+++ L++ ++D VHS KD+ ++ +G++++A R D+ +++K+
Sbjct: 58 KDFFTKELDEALLTNKVDMVVHSYKDLGSERPQGIKLAAITKRHFAHDILFIKN-ETIKN 116
Query: 121 LALHS--VIGTSSLRR----KALLLRWRSDISV----IDFRGKIETRLNKLNNNKAHAIL 170
L+ ++GTSS RR +A L + ++ RG + TR+ KL + + AI+
Sbjct: 117 LSNKKEFIVGTSSPRRIVNIEAQLSEYLPTDNIKVETKMLRGNVNTRIGKLVDGQYDAIV 176
Query: 171 LAYAGIKRLK------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218
LA GI+RL + + IL FP + QGA+ IE + N + + +
Sbjct: 177 LALPGIERLAHSEKSLEELKVLLKDLNYMILPQSTFPSAASQGALAIECNEENTELYQKL 236
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
++I + T V+ ER G C A+ G
Sbjct: 237 QLIEDKVTVSEVSRERQAFNGYGGGCHLAVGVNVKRVGDN 276
>gi|118431819|ref|NP_148522.2| hydroxymethylbilane synthase [Aeropyrum pernix K1]
gi|152031618|sp|Q9Y9J0|HEM3_AERPE RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|116063141|dbj|BAA81310.2| hydroxymethylbilane synthase [Aeropyrum pernix K1]
Length = 307
Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ R S L+L + L + H ++ + + GD ++R L IG G+FT
Sbjct: 3 VRVAARGSRLSLLQVEQALEELSRYAGVSMHW-EVVRVKSAGDVWSDRPLESIGVVGVFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA-YLPREDIRDVFISHTAQS-LKDLAL 123
E+++ + SG D AVHS KDMPT G R RD IS ++DL
Sbjct: 62 REVDRAVASGAADIAVHSLKDMPTSGYGGPLKIVYIASRPSARDALISRQGPGRVEDLEP 121
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S +GTSS RR+AL L + I V + RG ++TRL KL AI+ + AG+ RL
Sbjct: 122 GSTLGTSSARRRALSLHYNPRIRVENLRGNLDTRLRKLREGLYDAIIASEAGLIRLGV-D 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V L+ FPP+PGQG + + V + +++++ ++ W ER L
Sbjct: 181 VEYTPLDPSYFPPAPGQGFVAVVARVGSN-VEKMLRDLDKPPWWHVAWAERGVLEGARAG 239
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C++ +A +A G S + L+ DG + G +A IG + +
Sbjct: 240 CRTPVAAYAEPLGRSMVRVTAAALSPDGSRAYWARAEGRIEEARRIGVSLGEEL 293
>gi|325001831|ref|ZP_08122943.1| porphobilinogen deaminase [Pseudonocardia sp. P1]
Length = 322
Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 19/312 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA+A + L H ++ +ST GDR + +T++G G+F
Sbjct: 3 TLKIGTRPSKLAVAQSTTIADRLTAA----GHPSELVTVSTSGDR-SMAPVTQLG-VGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L +G+ID AVHS KD+PT + L+I+A RED RD ++ + L +L
Sbjct: 57 VSALRDALDAGDIDVAVHSFKDLPTAQPEHLRIAAVPGREDPRDALVT-GGRVLGELGRG 115
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT S RR A L + V+ RG ++TR+ K+ + + A+++A AG++RL + +
Sbjct: 116 ARVGTGSPRRAAQLYALGQGLEVVPIRGNVDTRIGKVRSGELDAVVVAAAGLRRLGRIEE 175
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243
E+++ P+P QGA+ IE + ++++ V++ +V ERA LA L+
Sbjct: 176 ADELIDPLQMLPAPAQGALAIECRETDTGLADVLRSVLDDPGVRAAVAAERAVLATLEAG 235
Query: 244 CKSAIAGFAYCKG---------STLYFYGI--VLASDGKIFHEVSRNGNRCDAINIGRDA 292
C + + A L + V S G A +G
Sbjct: 236 CTAPVGALADVVSDLDDDGRAVDRLSLRAVTGVGDITEGDVLRASVTGEMDAAEKLGATL 295
Query: 293 AQYIRFISNKNV 304
A + + +++
Sbjct: 296 AHELLDLGGEDL 307
>gi|302521530|ref|ZP_07273872.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
gi|302430425|gb|EFL02241.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
Length = 331
Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats.
Identities = 85/306 (27%), Positives = 127/306 (41%), Gaps = 14/306 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIGGK 61
+G+R S LA A E ++P V ++ GD + +T G
Sbjct: 29 VTVGSRGSALARAQVREMVERWER--EVPGVRFVRRVITEAGDADRSTPTVAGVTRRAGA 86
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL-PREDIRDVFISHTAQSLKD 120
F+ E L+ GE+D VH KD+PT G + PRED+RD +L
Sbjct: 87 SAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDALC---GATLAG 143
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A LL R D+ V+ RG + RL + A++LA G+ RL
Sbjct: 144 LPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLARTRT--LDAVVLAAVGLHRLG 201
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER LAEL
Sbjct: 202 LADEITEYLDPEAYPPAPGQGALAIQVRE-DSEAARLLAASGDAATDAEVRAERVLLAEL 260
Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C + + + + L + V DG + G + + A +
Sbjct: 261 HGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPSAEPEKLALTVAASLLAQ 320
Query: 300 SNKNVF 305
+
Sbjct: 321 GAARIL 326
>gi|153865130|ref|ZP_01997767.1| Porphobilinogen deaminase [Beggiatoa sp. SS]
gi|152145375|gb|EDN72233.1| Porphobilinogen deaminase [Beggiatoa sp. SS]
Length = 211
Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
+ RE+ D F+S+T +L L +++GTSSLRR++ LL R D+ + RG + TRL+K
Sbjct: 1 MRREEPFDAFVSNTYATLAALPEGAIVGTSSLRRQSQLLAHRPDLQIRSLRGNVGTRLSK 60
Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
L+N AI+LA G+KRL + I+EI++ P+ GQGAI IE ++ + ++ +
Sbjct: 61 LDNGDYDAIVLAAVGLKRLGLVERIREIIDSTIMLPAIGQGAIGIECRQDDLETRQHIDN 120
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRN 279
+N DT D V ERA L+G C+ IAG+A + S L G+V +G+ +
Sbjct: 121 LNDPDTQDCVIAERALNESLEGGCQVPIAGYAEIQSSENLTMRGLVGDIEGQHILRHNLQ 180
Query: 280 GNRCDAINIGRDAAQYIRFISNKNVFN 306
G R A +G+ A+ + +
Sbjct: 181 GARHLAAELGKSLAKVLLTQGAAQILE 207
>gi|28572887|ref|NP_789667.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27]
gi|28411020|emb|CAD67405.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27]
Length = 321
Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats.
Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 44/331 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A + + ++ DV + ++I S R + G F
Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSV---RRRD---------GSF 50
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ GE D AVHS KD+P +G I+A LPRED DV + +L L
Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E
Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168
Query: 185 IKEILNIEDFPPSPGQGAICIE-THV--NNPKAQELVKV-INHEDTWDSVNCERAFLAEL 240
I E +I D+P + GQG++ IE ++P+ + V +++ + ER L+ L
Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228
Query: 241 DGSCKSAIAGFA--YCKGSTLYFYGIVLASDGKIFHEV--------------------SR 278
C S IA A +L + V + DGKIF E S
Sbjct: 229 QADCFSPIAVHAVYTANDKSLRLHAKVFSRDGKIFCESIRFARLVKQLTDTNQNHTKNSG 288
Query: 279 NGNRCDAINIGRDAAQ----YIRFISNKNVF 305
+ + +A+ + A+ + + + +
Sbjct: 289 SDDIGNALEVAMTLAKTVVDELLSKNAREIL 319
>gi|111220451|ref|YP_711245.1| porphobilinogen deaminase 1 [Frankia alni ACN14a]
gi|111147983|emb|CAJ59649.1| Porphobilinogen deaminase 1 (PBG 1) (Hydroxymethylbilane synthase
1) (HMBS 1) (Pre-uroporphyrinogen synthase 1) [Frankia
alni ACN14a]
Length = 402
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 91/364 (25%), Positives = 149/364 (40%), Gaps = 79/364 (21%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
S LAL + + L + + ++P+ T GDR + +++IGG G+F + L
Sbjct: 36 SALALTQSGMIAAQLRERV---GCAVDLVPIVTAGDR-SPAEISQIGGTGVFVSALRDAL 91
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132
++GEID AVHS KD+PT GL ++A RED RDV +S + + L L + + T +
Sbjct: 92 LAGEIDLAVHSLKDLPTATPPGLVLAAVPTREDTRDVLVSPSGRGLAALGPGARVATGAP 151
Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
RR A L V+ RG ++TRL K + + A++LAYAG+ RL + + EIL+ E
Sbjct: 152 RRAAQLRALGLGFDVVAIRGNVDTRLKKAIDGEVDAVVLAYAGLARLDRLDAVTEILDPE 211
Query: 193 DFPPSPGQGAICI----------------------------------------------- 205
P+PGQGA+ +
Sbjct: 212 VMLPAPGQGALAVECAAEAGLRLAGPARALVAAGAGDHADGDRPGAEAGRDGRGRGPDVG 271
Query: 206 ----ETHVN-----NPKAQELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
+T + + EL++ V++ + ++ ERAFLA ++ C + + A +
Sbjct: 272 RNSGQTRSDHGQPLDGGLAELLRFVLDDASSSVAIRAERAFLAGIEAGCTAPVGALAVAE 331
Query: 256 ------------------GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L +V A DG G+ D +G+ A +
Sbjct: 332 PAPAAAVGTVAPAGDASPAGRLRLRAVVAAPDGSTVLRRDVTGSAVDPEALGQRLADDLL 391
Query: 298 FISN 301
Sbjct: 392 SAGA 395
>gi|16611929|gb|AAL27412.1|AF429957_3 porphobilinogen deaminase [uncultured bacterium]
Length = 299
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 15/268 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LAL A L+ + ++ + T+GDR R ++ G+G FT
Sbjct: 4 VRLATRGSRLALWQAEWVAKQLVQQGA----EVELVVVETQGDREK-RPFAQMQGQGFFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-----TAQSLKD 120
+ +++ ++ G D AVHS KD+P+ GL+I+A PRED R++ +
Sbjct: 59 KAVQEAVLEGRADFAVHSYKDLPSARPAGLEIAAVPPREDPRELLLVRLQAVDQVAPGLP 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+S+ RR+A L R D+S+++ RG + TR+ KL + A+LLAYAG++RL
Sbjct: 119 LRAGARVGSSAARRQAQLAHLRPDLSLLELRGNVLTRVEKLRQGEYDAVLLAYAGVRRLG 178
Query: 181 KEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV-NCERAFL 237
+ P+P QGA+ +E ++ + + L++ ++ +
Sbjct: 179 LDLSPFHWQVLPPTLLVPAPAQGALALECRQDDKRLRPLLEPLDDPSAGVRCGGA--GLM 236
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIV 265
A L G C+ A+ A L
Sbjct: 237 ARLAGGCQLALGALAQETPEGLQLLAWY 264
>gi|315650219|ref|ZP_07903294.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986]
gi|315487576|gb|EFU77884.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986]
Length = 309
Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RIGTR S LALA ++ + P I +P++T GD+ + +L EIGGKG
Sbjct: 4 KEIIRIGTRKSALALAQTKLVGDAVK--NSFPHIKIEYVPMNTIGDKRLDISLQEIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----L 118
LFT+E+E+ LI G+ID A+HSAKD+P + L++ L R +RDV + +
Sbjct: 62 LFTKELEEALIKGDIDLAIHSAKDLPLEFDNRLKLMPVLKRGAVRDVLVVKNDCPVDLQI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
KDL IGTSS RR + +I ++ RG + TR+ K+ + ++LA AG+ R
Sbjct: 122 KDLPRGFRIGTSSKRRSEQAMLLNHNIKIVPIRGNVLTRIGKIFSGDTDGVILARAGLDR 181
Query: 179 L------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
L +KV + D P+P QG +C + + E++K I ED
Sbjct: 182 LLADTNCAGECDKILQKVNITDIKETDILPAPAQGILCGQYASD--YISEVLKKIQDEDC 239
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263
N ER +L+ L+ C ++ +
Sbjct: 240 NILFNAERKYLSVLEADCHTSAGIYIKKDRDNYSIKA 276
>gi|28493699|ref|NP_787860.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist]
gi|28476741|gb|AAO44829.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist]
Length = 321
Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 44/331 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A + + ++ DV + ++I S R + G F
Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSV---RRRD---------GSF 50
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ GE D AVHS KD+P +G I+A LPRED DV + +L L
Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E
Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168
Query: 185 IKEILNIEDFPPSPGQGAICIE-THV--NNPKAQELVKV-INHEDTWDSVNCERAFLAEL 240
I E +I D+P + GQG++ IE ++P+ + V +++ + ER L+ L
Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228
Query: 241 DGSCKSAIAGFA--YCKGSTLYFYGIVLASDGKIFHEV--------------------SR 278
C S IA A +L + V + DGKIF E S
Sbjct: 229 QADCFSPIAVHAVYTANDKSLGLHAKVFSRDGKIFCESIRFARLVKQLTDTNQNHTKNSG 288
Query: 279 NGNRCDAINIGRDAAQ----YIRFISNKNVF 305
+ + +A+ + A+ + + + +
Sbjct: 289 SDDIGNALEVAMTLAKTVVDELLSKNAREIL 319
>gi|16081675|ref|NP_394046.1| porphobilinogen deaminase [Thermoplasma acidophilum DSM 1728]
gi|13627133|sp|Q9HKM5|HEM3_THEAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|10639740|emb|CAC11712.1| porphobilinogen deaminase related protein [Thermoplasma
acidophilum]
Length = 295
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 8/269 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ A S++ + + I+ ++GD L IG G+F
Sbjct: 3 TIRIGTRPSRLAVRQAEIVASAIRHA----GYEVEIVKYRSEGDSDLKSPLYSIGKTGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E + ++SG+ID AVHSAKD+P ++ + L+ISA +PR D +S L L
Sbjct: 59 VERLNSLILSGDIDAAVHSAKDIPYEIDRRLRISAVMPRGRFEDALVSEN--PLSKLPPG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSSLRR+ +L R D+ V + RG ++TR+ K+ + I++A A I RL+
Sbjct: 117 SVIGTSSLRRRYQILYQRKDVKVSNIRGNVDTRIEKMRSEGMAGIVMALAAIDRLELNLR 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E F P+P QG I + + + KA E++ IN DT+D + ER+ L C
Sbjct: 177 -YWPFDPEKFVPAPNQGIIAVVS-EDGSKASEVLSSINDADTYDDMMAERSITQGLKLGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ + + G + A DG
Sbjct: 235 STPVGILSRHTGKGMRILAQFFAMDGSDM 263
>gi|297567358|ref|YP_003686330.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
gi|296851807|gb|ADH64822.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
Length = 304
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 14/273 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA A + L D ++ + T+GDR +++ G
Sbjct: 1 MSR--VRIATRGSRLARWQAEWVAAQLQDQ----GIASTLVIVETQGDRER-VAFSQMQG 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G FT+ ++ + G D AVHS KD+P+ GL ++A RED R+ + +
Sbjct: 54 QGFFTKAVQDAVREGRADLAVHSLKDLPSAPTPGLVLAAIPIREDPREALLVLPSAWDAQ 113
Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
LA + +G+S++RR+A L + R D+ +++ RG + TR+ KL + AILLA+AG
Sbjct: 114 APALPLAPGARVGSSAVRRQAQLAQLRPDLKLLELRGNVPTRVEKLQSGGYEAILLAWAG 173
Query: 176 IKRLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+KRL + + +L +F P+PGQGA+ +E + + + +++ ++ +V E
Sbjct: 174 LKRLGLDLGGLAVRLLEPREFVPAPGQGALALECREEDTQLRGVLQGLDDPTARLTVGIE 233
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266
R +A L G C+ A+ A
Sbjct: 234 RGLMARLQGGCQLALGASAQRVQGGWQLLAWYG 266
>gi|167844775|ref|ZP_02470283.1| porphobilinogen deaminase [Burkholderia pseudomallei B7210]
Length = 222
Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216
I+ +L+++D P+ GQGA+ IE
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAA 222
>gi|282857646|ref|ZP_06266861.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455]
gi|282584522|gb|EFB89875.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455]
Length = 245
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE----IG 59
K R G+R S LALA ++ H P + + ++P++T+GD + +E G
Sbjct: 2 KTLRFGSRTSDLALAQTRLVMDAVGRAH--PEYRLELVPIATRGDVDM-KPFSEASDTFG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KGLFT E+E+ L+ G ID AVHS KD+P + L + A R D RDV
Sbjct: 59 IKGLFTRELEEALLDGSIDVAVHSLKDLPAVQDERLPLLACFRRGDPRDVLALPAGAEAM 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ ++IG SS RR+ L V RG + TRL KL+ + A++LA AG++RL
Sbjct: 119 N---GALIGCSSARRRLQALDLFEGAEVRPVRGNVGTRLRKLDEGQFSALILAAAGLERL 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++++ P+PGQG + + + ++ + I D D ERAF A
Sbjct: 176 GLRARVSRYFSLDEIVPAPGQGILACQGRAGDKN-EDWLDAIFDPDATDCARAERAFSAA 234
Query: 240 LDGSCKSAIAG 250
L G C S +
Sbjct: 235 LGGGCASPVGA 245
>gi|297622476|ref|YP_003703910.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093]
gi|297163656|gb|ADI13367.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093]
Length = 320
Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 84/269 (31%), Positives = 133/269 (49%), Gaps = 13/269 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKGL 63
RI TR S LAL A R L + ++PL T+GDR + G+G
Sbjct: 20 VRIATRKSALALWQATWVRERLAAL----GVATELVPLDTQGDRTQEAGTPFRLMPGQGF 75
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD--- 120
FT+ ++ ++ G D AVHS KD+P+ L GL+++A RED RDV + + +
Sbjct: 76 FTKAVQDAVLEGRADVAVHSHKDLPSARLAGLELAAVTEREDPRDVLLVRPGAARPESAA 135
Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +V+GTS+ RR+A L R D+ V + RG + TR+ L + A++LA AG+ R
Sbjct: 136 LPLVEGAVVGTSAARRQAQLRHLRPDVRVAELRGNVPTRVRALREGRYDAVVLAAAGLAR 195
Query: 179 LKK--EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
L + L+ + F P+P QGA+ +E + + L+ ++ D + +V ER
Sbjct: 196 LALDLSDLTVYPLDPKRFVPAPAQGALALEIRRGDAELAALLTELHAPDAYQTVAAERGL 255
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIV 265
+ L G C+ A+ +A +G L
Sbjct: 256 MGMLQGGCQLALGAYAALQGGELELTAWY 284
>gi|76801314|ref|YP_326322.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Natronomonas pharaonis DSM 2160]
gi|76557179|emb|CAI48754.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Natronomonas pharaonis DSM 2160]
Length = 361
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 84/357 (23%), Positives = 138/357 (38%), Gaps = 60/357 (16%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S LAL A +L + + ++ + T GD + + + +G G F
Sbjct: 4 TIRLATRGSDLALRQAQRVADALDSRRR----TVELVEVETTGDAVRDELIHRLGKTGAF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+++K+I G++D AVHS KDMPT+ L ++ R DV ++ +L L
Sbjct: 60 VRSLDEKVIDGDVDAAVHSMKDMPTEFPDELVVAGVPERASPGDVLVTPDGDTLDSLPDG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI--------------- 169
+ +GTSSLRRKA LL R D+ V RG ++TR+ KL A
Sbjct: 120 ATVGTSSLRRKAQLLAARPDLDVQPLRGNVDTRVQKLLAPSLQAEHERRLEAEDDEGEAE 179
Query: 170 --------------LLAYAGIKRLKKEKVIKEILN------------------------- 190
+ + ++++ + +EI
Sbjct: 180 DEDGDDADRYDRPPEEWFDDLAEIERQALGREIETRFDGIVLAEAGLQRTGLLAQVETER 239
Query: 191 -IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
E F P+ GQGA+ + + Q L ++H T ER L L G C + +
Sbjct: 240 LPETFVPAAGQGALAVTACDGDV-GQTLQNELDHPRTRVETTVERTILGTLGGGCVAPVG 298
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
A +G + VL+ DG E +R+ R+ A + ++
Sbjct: 299 IHAVVRGEYVQASVRVLSQDGTEEIEATRDLPIERHPEAAREFADELADRGAADLIQ 355
>gi|170044628|ref|XP_001849943.1| porphobilinogen deaminase [Culex quinquefasciatus]
gi|167867697|gb|EDS31080.1| porphobilinogen deaminase [Culex quinquefasciatus]
Length = 474
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 31/243 (12%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVII------------------------PLSTKGD 48
S LAL S L ++ P I ++T GD
Sbjct: 167 SKLALIQTKYVISCLQKLN--PDVVYEIRKYFQHVHLCWHVPSYLLAFFLSPDTMTTVGD 224
Query: 49 RITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108
R+ N++L +IG K LFT+++E L +G +D VHS KD+PT L G+ I A L R+D RD
Sbjct: 225 RVLNKSLPKIGEKSLFTKDLEDALRTGGVDFVVHSLKDLPTALPLGMAIGAVLERDDPRD 284
Query: 109 VFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NN 163
+ +H ++L L SV+GTSSLRR A L R ++ V D RG + TRL KL +
Sbjct: 285 ALVLNEAHRGRTLSTLPKGSVVGTSSLRRSAQLARKYENVVVCDIRGNLNTRLAKLDADG 344
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+K I+LA AG+ R+ + +++ + + GQGA+ +E N+ +++ + H
Sbjct: 345 SKFAGIILAQAGLVRMGWNARVSQVIEPGEILYAVGQGALAVECRSNDEYILDMLSKLCH 404
Query: 224 EDT 226
+T
Sbjct: 405 LET 407
>gi|28202885|gb|AAO35329.1| porphobilinogen deaminase [Clostridium tetani E88]
Length = 218
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 79 CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALL 138
AVHS KD+P ++ I A RED+RD F+S +L S IGTSS RR + +
Sbjct: 1 MAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSGSKIGTSSRRRSSQI 60
Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198
R D+ V+ RG ++TRL K+ +LA AG+KRL E+VI + + E+ P+
Sbjct: 61 KILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEVITDYFSPEEMVPAI 120
Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
GQGA+ IE + +K I+HE+T V ER+F+ L G C S I A +
Sbjct: 121 GQGALGIEI-KKYEDVIDYIKGIDHEETRICVEGERSFMEALKGDCHSTIGAHAIVENDL 179
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+Y G + +GKI + G + + +G+ A I
Sbjct: 180 MYMTG-IFEVNGKIVKKD-IEGKKENYKQLGKTLADRI 215
>gi|331003909|ref|ZP_08327398.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411929|gb|EGG91329.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 311
Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 149/314 (47%), Gaps = 23/314 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S LALA + ++ ++ P I IP+ST GD+ + +L EIGGK
Sbjct: 3 NKNIIRIGTRKSALALAQSKLVGDAI--LNSFPHIKIEYIPMSTAGDKRLDISLQEIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QS 117
GLFT+E+E+ LI+G ID AVHSAKD+P + L++ L R + D+
Sbjct: 61 GLFTKELEEALINGNIDLAVHSAKDLPLEFDHRLKLMPVLKRAPVNDILAVKKDFLKETD 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+K L IGTSS RR+ LL DI +I RG + TR+ K+ +N ++LA AGI+
Sbjct: 121 IKTLPEGFRIGTSSKRREKQLLFLNKDIKIIPVRGNVITRIEKIFSNDVDGVILAAAGIE 180
Query: 178 RLK------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
RLK +K+ + +D P+P QG +C E N + + +++ I +
Sbjct: 181 RLKANDKYAAEFKDILDKISIINIREKDILPAPAQGILCAE--YANDEMETILEKIQDGE 238
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
ER +LA L C ++ + Y +GK + + +
Sbjct: 239 CNTLFFAERKYLAVLQADCHTSAGIYIYKALDKYSIKAYF---EGKYLEKNMIDSSEKAL 295
Query: 286 INIGRDAAQYIRFI 299
+ + A ++
Sbjct: 296 LEAVEELAGRLKRK 309
>gi|70606576|ref|YP_255446.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639]
gi|68567224|gb|AAY80153.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639]
Length = 296
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 14/293 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S L+ L ++ +I + TK D ++ L +G KG+F
Sbjct: 3 IRIAARGSLLSRIQVKMVEDKLRNL----GIETELIVVKTKADLFQDKPLNSLG-KGVFE 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ + +I+GE D AVHS KDM + + + L + LPR+ D ++ + L ++
Sbjct: 58 KEVNEAVINGEADIAVHSMKDMLSDMDEKLVLYGVLPRDSPYDSLVAE--KDLFNIESGK 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR++++ +R D+ V D RG I+TRL K + + I++A A IKRL V
Sbjct: 116 VIGTSSIRRRSMISFYRRDLVVKDLRGNIDTRLKKYQSKEYDGIVIAEAAIKRLN-SVVR 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + P QG I I VN K + L + +N E T ER + L G C
Sbjct: 175 YYKIDPKIITPEANQGIIAIVGRVN-EKLKTLFRELNDERTLKEALVERTVVKLLGGGCH 233
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDAAQYI 296
S I A + + SD K +++ G R D +G + +
Sbjct: 234 SPIGILASMISENEFNVISTYVISDKK---KITIEGIYRGDPTTVGEKVVKDM 283
>gi|294054671|ref|YP_003548329.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221]
gi|293614004|gb|ADE54159.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221]
Length = 284
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 89/250 (35%), Positives = 126/250 (50%), Gaps = 14/250 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLAL R+ L + K+P + + L+T+ D + +L + GG GLFT
Sbjct: 3 ILIATRKSPLALKQTEMVRAWLAE--KLPNDHYEELQLTTQVDERLSWSLEKRGGIGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L++ + AVHSAKDMPT L I+ YLPR DV + ++
Sbjct: 61 KELEEALLANKATLAVHSAKDMPTTFQDDLCIAGYLPRARANDVIVKR-----SEIESPK 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEK- 183
I TSS RR+A L +D RG + TRL K+ +A A LLA AG+ RL +
Sbjct: 116 RIATSSPRRRAQLALLNNDAEWTTLRGNVGTRLRKIAEAQEADATLLAAAGLNRLDIQSY 175
Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ L IE P+PGQ AI I+ + E + + EDT +V ER FL L
Sbjct: 176 DGLDFIELPIEQMVPAPGQAAIAIQCREKD---LEKYQDLFCEDTKLAVTLEREFLHRLG 232
Query: 242 GSCKSAIAGF 251
G C++ +
Sbjct: 233 GGCQTPVGAH 242
>gi|291518806|emb|CBK74027.1| porphobilinogen deaminase [Butyrivibrio fibrisolvens 16/4]
Length = 239
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 109/206 (52%), Gaps = 7/206 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR S LAL L P + ++ + T GD +R L +IG KGLF
Sbjct: 3 IKVGTRGSKLALVQTNYVIEQLKKA--FPENEYEVVVIKTTGDIDQSRPLDQIGSKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++ EI AVHS KDMP+K KG + RED RDV I S+++L ++
Sbjct: 61 DEIERALVADEIQLAVHSMKDMPSKPAKGCVFAKSWTREDARDVIIFREVDSIEELPKNA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-----AHAILLAYAGIKRLK 180
I T S RR LL R D+ + RG I+TRL KL I+LA AG+ RLK
Sbjct: 121 KIATGSKRRSYQLLSLRPDLELCPIRGNIDTRLRKLVEGNSDGTILDGIVLAAAGLNRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIE 206
+IL +++ PSP QG + IE
Sbjct: 181 ISLDHYQILEVDEMIPSPAQGTLAIE 206
>gi|256026474|ref|ZP_05440308.1| porphobilinogen deaminase [Fusobacterium sp. D11]
gi|289764485|ref|ZP_06523863.1| porphobilinogen deaminase [Fusobacterium sp. D11]
gi|289716040|gb|EFD80052.1| porphobilinogen deaminase [Fusobacterium sp. D11]
Length = 220
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KDMP KGL A RED RDV +S L L + IGTSSLRR L R
Sbjct: 1 MKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVTLPQGAKIGTSSLRRAMNLKAVRP 59
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
D + RG I TRL KL AI+LA AG+KR I E L+ E FPP+P QG +
Sbjct: 60 DFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTGMTDKITEYLSGEVFPPAPAQGVL 119
Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263
I+ N+ + +E++K I++E+ V ER F DG C + + ++ G + F
Sbjct: 120 YIQCRENDKEIKEILKSIHNENVAKIVEIEREFSKIFDGGCHTPMGCYSQVNGDKIKFTA 179
Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ L GK + I AA+ I+ NK
Sbjct: 180 VYLDE-GKQ-IRAVIEDDLTKGKEIAYMAAEEIKNKINKG 217
>gi|13541465|ref|NP_111153.1| porphobilinogen deaminase [Thermoplasma volcanium GSS1]
gi|25453027|sp|Q97B26|HEM3_THEVO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|14324849|dbj|BAB59775.1| hydroxymethylbilane synthase [Thermoplasma volcanium GSS1]
Length = 297
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 8/266 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA+A A SSL + + I+ + GD T + IG G+F
Sbjct: 2 KIKIGTRPSNLAVAQANMVASSLEAI----GIDTEIVKHRSAGDIDTKNPIYSIGKTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+++ ++ GEID AVHSAKD+P+++ L I+A L R D +S L+ L +
Sbjct: 58 VQDLNNMILRGEIDVAVHSAKDIPSEIENRLTIAATLKRGSFNDALVSK--YDLRSLPIS 115
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS+RR L R D+ + RG IETR+ K++ AI++A A I+RL V
Sbjct: 116 AKVGTSSIRRIFQLKYARQDLKFENIRGNIETRIAKMSELGLDAIVMAEAAIQRLGL-NV 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L+ F P+P QG I + + +++++ IN E+T++ + ER+ + +L C
Sbjct: 175 EYSKLDENKFVPAPNQGIIAVVSKKEGT-VRKILEEINDENTFEEMQIERSVVQQLKLGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
+ + + G + G
Sbjct: 234 STPVGILSRPSGKGHKIIAQFFSMQG 259
>gi|217070488|gb|ACJ83604.1| unknown [Medicago truncatula]
Length = 214
Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KD+PT L + + LPRED+RD FIS +A SL DL SVIGT+SLRRK+ +L
Sbjct: 1 MKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYP 60
Query: 144 DISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202
+SV D FRG ++TRL KL+ A LLA AG KRL + + L+I+D P+ QGA
Sbjct: 61 SLSVQDNFRGNVQTRLRKLSEGVVKATLLALAGPKRLNMTENVTSTLSIDDMLPAVAQGA 120
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYF 261
I I N+ K E + +NHE+T +++CERAFL LDGSC++ IAG+A K F
Sbjct: 121 IGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLF 180
Query: 262 YGIVLASDGKIFHEVSRNGN--RCDAINIGR 290
G+V + DG E SR G D + +GR
Sbjct: 181 RGLVASPDGTRVLETSRIGPYAYEDMMKMGR 211
>gi|297170423|gb|ADI21455.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0070_10G19]
Length = 302
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 83/275 (30%), Positives = 139/275 (50%), Gaps = 10/275 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R SPLA+ A + ++ + +IP+ + GD +T++ L++IGGKGLF
Sbjct: 3 IRIACRKSPLAVLQANKFIEAIQKKYGK-EIKCRLIPMHSAGD-LTDKDLSQIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--LKDLAL 123
E+E L S D AVHS KD+P KL G +I + L R + DV I ++DL
Sbjct: 61 SELESALASDNADVAVHSLKDVPAKLNDGFEIISCLERGNPNDVIILKQNGPSVIQDLNN 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
HS I TSS RRKA + + RG I TR++K + +L+A ++RL ++
Sbjct: 121 HSKIATSSPRRKAQWKIYNPTFEFVPIRGNISTRISKFLESDLDGLLMAATALERLNIQE 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ N +D PS QG I +E ++ + + +++++ +NH++++++ ER + LD
Sbjct: 181 HHYDEFNYQDVVPSVCQGIIGMEIYLGTISQEKRQIIQSVNHQNSFNAALMEREIIKSLD 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276
C S I +Y +G +++
Sbjct: 241 ADCMSPIGVICR--DKMIYLDA--FNKEGTEIYQL 271
>gi|306817540|ref|ZP_07451283.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239]
gi|304649582|gb|EFM46864.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239]
Length = 360
Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 51/346 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P IGTR S LAL + L + I T+GD +L+ +GG
Sbjct: 7 AQRPLVIGTRGSKLALTQTQMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165
+ +GT S RR L R D+S++D RG + TR+ ++
Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQDRAKED 181
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219
A++LA AG++RL E V + L E P+ GQGA+ +ET + A+E ++
Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDL-SETILPAGGQGALALETVADGLAAEEGRILAQTLR 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDG 270
+++ E T V+ ERA L L+ C + + L V+ +G
Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG 300
Query: 271 KIFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303
EVS G D A +G D A +
Sbjct: 301 -ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345
>gi|332295808|ref|YP_004437731.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796]
gi|332178911|gb|AEE14600.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796]
Length = 297
Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 11/301 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ IGTR S LAL A + I II GD+ L E
Sbjct: 1 MIER-IVIGTRGSKLALTQARYVAEFINKFDSTIKIEIKIIKT--TGDK-LMVALHEAPE 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
+GLF +EIE+ L++ +ID AVHS KDMP + + L+I A RED DV + ++
Sbjct: 57 RGLFVKEIEEALLNKDIDLAVHSMKDMPAEAVSELEIFAVPVREDPSDVIVPRKELSIEN 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L D++ +SV TSSLRR +LL + + + D RG I+TRL KL+ +++A A +
Sbjct: 117 LDDISPNSVFATSSLRRISLLNNFFTFKEIKDIRGNIDTRLKKLDEGFCDYLIMAKAALN 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL K L+ F P+ QGA+ I+ + + +++K ++ +T S + ER
Sbjct: 177 RLGI-KRNYITLDPFTFVPAVAQGALAIQGRRKDFNRFAKIIKFLDDFNTRISTDIERRV 235
Query: 237 LAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L + G C+ + K + + DG I + + D + + +
Sbjct: 236 LKLIGGGCQIPFGCYVCPIKNKSFKISAFI-EKDGNIRRVLFEEDFKKDKNEVANEIYKR 294
Query: 296 I 296
+
Sbjct: 295 L 295
>gi|269977777|ref|ZP_06184737.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1]
gi|269934081|gb|EEZ90655.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1]
Length = 360
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 51/346 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P IGTR S LAL + L + I T+GD +L+ +GG
Sbjct: 7 AQRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165
+ +GT S RR L R D+S++D RG + TR+ ++
Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219
A++LA AG++RL E V + L E P+ GQGA+ +ET + A+E ++
Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDL-SETILPAGGQGALALETVADGLAAEEGRILAQTLR 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDG 270
+++ E T V+ ERA L L+ C + + L V+ +G
Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG 300
Query: 271 KIFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303
EVS G D A +G D A +
Sbjct: 301 -ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345
>gi|227876587|ref|ZP_03994697.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243]
gi|227842788|gb|EEJ52987.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243]
Length = 360
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 51/346 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P IGTR S LAL + L + I T+GD +L+ +GG
Sbjct: 7 AQRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165
+ +GT S RR L R D+S++D RG + TR+ ++
Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219
A++LA AG++RL E V + L E P+ GQGA+ +ET + A+E ++
Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDL-SETILPAGGQGALALETVADGLAAEEGRILAQTLR 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDG 270
+++ E T V+ ERA L L+ C + + L V+ +G
Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG 300
Query: 271 KIFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303
EVS G D A +G D A +
Sbjct: 301 -ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345
>gi|300709477|ref|YP_003735291.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3]
gi|299123160|gb|ADJ13499.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3]
Length = 379
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 60/333 (18%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + P R+ TR S LALA A + +L + + ++ + T GDRI + + +
Sbjct: 1 MTTRSDPIRLATRGSDLALAQAESVKRALSGRRR----EVELVTVETTGDRIDDELIHRL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G F +++K+++G+++ A+HS KDMPT+ + L ++A R D ++ + L
Sbjct: 57 GKTGAFVHSLDEKVLAGDVEGAIHSMKDMPTEESQ-LVVAAVPERATAGDRLVTPDGKPL 115
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------- 161
+L + +GT SLRR A LL R D++V RG ++TR+ KL
Sbjct: 116 AELPEGATVGTGSLRRGAQLLAQRPDLTVEPLRGNVDTRVEKLLSKSLNEEYDRRVAADE 175
Query: 162 ----------------------------------NNNKAHAILLAYAGIKRLKKE-KVIK 186
+ AI+LA AG++R + ++
Sbjct: 176 QRKANTDDDFEPEFDRRPEEWIEGLSERERQAFERSESFDAIVLAAAGLERSGLDREIPT 235
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L E F P+ GQGA+ + T + A+E+ + ++H + ER LA L G C +
Sbjct: 236 SDLPTESFVPAAGQGALAV-TMADGDLAREVNEALDHPRSRVETTVERTVLATLGGGCVA 294
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
I A +G + VLA G+ V+R+
Sbjct: 295 PIGIHAVIQGEHVRTRVQVLARGGEPTISVTRD 327
>gi|292654255|ref|YP_003534152.1| porphobilinogen deaminase [Haloferax volcanii DS2]
gi|291372938|gb|ADE05165.1| porphobilinogen deaminase [Haloferax volcanii DS2]
Length = 363
Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 89/357 (24%), Positives = 151/357 (42%), Gaps = 60/357 (16%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S LA A A + +L ++ ++ + T GDRI + + +G G F
Sbjct: 4 TLRLATRGSALARAQAASVQGALAGRR----LDVELVEVETTGDRIQDELIHRLGKTGAF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++++++ GE+D AVHS KDMPT+ L ++ R DV ++ + DL
Sbjct: 60 VRALDERVLDGEVDAAVHSMKDMPTEKPADLVVAGVPERAPAGDVLVTAEGHDIDDLPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------------- 161
+V+GTSSLRR+A LL +R D+ V RG ++TR+ KL
Sbjct: 120 AVVGTSSLRRQAQLLNYRDDLEVEPLRGNVDTRIEKLLATHLQREHEARVENDKERQGKK 179
Query: 162 ----NNNKAH-AILLAYAGIKRLKKEKVIK---------------------------EIL 189
++ + G+ L+++ + + E L
Sbjct: 180 GKTDHDEAFDETADEWFEGLTELERQALGRQVETEYDAIVLAEAGLKRSGLTEKVNYERL 239
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F P+PGQGAI + ++ + + ++H T ER LAEL G C + +
Sbjct: 240 PRTTFVPAPGQGAIAVTA-ADSVVIELIRDKLDHPRTRVETTVERTILAELGGGCIAPVG 298
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
A +G ++ VLA+DG + SR+ + N R+ A + + +
Sbjct: 299 VHALLQGEHVHVDVQVLATDGSESIKTSRDLPVGNHANAAREFAAALCDRGAGQLVD 355
>gi|307699958|ref|ZP_07637009.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16]
gi|307614996|gb|EFN94214.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16]
Length = 360
Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 51/346 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P IGTR S LAL + L + I T+GD +L+ +GG
Sbjct: 7 AQRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165
+ +GT S RR L R D+S++D RG + TR+ ++
Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219
A++LA AG++RL E V + L E P+ GQGA+ +ET + A+E ++
Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDL-SETILPAGGQGALALETVADGLAAEEGRILAQTLR 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDG 270
+++ E T V+ ERA L L+ C + + L V+ +G
Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG 300
Query: 271 KIFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303
EVS G D A +G D A +
Sbjct: 301 -ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345
>gi|111075012|gb|ABH04865.1| porphobilinogen deaminase [Heliobacillus mobilis]
Length = 187
Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL + L ++ P + + TKGD+I + L +IG KG
Sbjct: 5 QRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKIGDKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L L
Sbjct: 63 LFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHG-GLDALP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ RL
Sbjct: 122 QGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRLGWA 181
Query: 183 KVIKEI 188
+ I +
Sbjct: 182 EKISQY 187
>gi|116754430|ref|YP_843548.1| porphobilinogen deaminase [Methanosaeta thermophila PT]
gi|116665881|gb|ABK14908.1| hydroxymethylbilane synthase [Methanosaeta thermophila PT]
Length = 270
Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 139/264 (52%), Gaps = 3/264 (1%)
Query: 42 PLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101
+ T GD +R L I G+GLF EI+++++SGEID AVHS KD+P+K + L+I+A +
Sbjct: 2 TVRTSGDLFLDRPLHMISGQGLFVREIDERMLSGEIDLAVHSMKDLPSKRPERLRIAAIM 61
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
R+ D+ ++ L DL +VIGTSS+RR A L R R D+ V RG ++TRL KL
Sbjct: 62 KRDSPCDILLTKDGSGLDDLKSGAVIGTSSMRRAAQLRRARPDLVVRSLRGNLQTRLRKL 121
Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
+ + I++A AG++R+ + ++L+ F PSP QG I + + + L +I
Sbjct: 122 HAGEYDGIVIAEAGVQRMGY-HLGYKVLDPGFFVPSPNQGTIAVVSVAG-TEGDALASLI 179
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
+H + + ER + + G C +A FA G ++ +L+ DG+ F +
Sbjct: 180 DHRPSREETMVERRIMEVVGGGCLVPMAVFARHLGDRIHVTAEILSKDGERFVRLEDTVP 239
Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305
R D + + + + +
Sbjct: 240 R-DGLESAERIGRRLLEMGGDELV 262
>gi|313124929|ref|YP_004035193.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM
11551]
gi|312291294|gb|ADQ65754.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM
11551]
Length = 375
Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats.
Identities = 86/365 (23%), Positives = 152/365 (41%), Gaps = 64/365 (17%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M++ R+ TR S LAL R +L D ++ ++ + T+GD+I + L +G
Sbjct: 1 MKRGTLRLATRGSDLALRQTASVRDTLADRR----FDVELVEVETRGDQIRDELLHRLGK 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F ++++++ E+D AVHS KDMPT+ + L ++ R DV ++ + ++
Sbjct: 57 TGAFVRALDERVLDEEVDAAVHSMKDMPTEHPRDLVVAGVPERAPANDVLLTPDGTAFEN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------------- 161
L SV+GTSSLRRKA +L R D+ V RG ++TR+ KL
Sbjct: 117 LPAGSVVGTSSLRRKAQILSARPDLEVEPLRGNVDTRVEKLLAPTLQREHEARVDDDSDK 176
Query: 162 -------------NNNKAHAIL-LAYAGIKRLKKEKVIK--------------------- 186
+ + + +++ + +
Sbjct: 177 KANSAEASASGEEYETDFDRTIEEWFDDLSEIERRSLERDVETEYDAIVLAEAGLKRSGL 236
Query: 187 ------EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ L +F P+PGQGAI + ++ + ++ T + ER LAEL
Sbjct: 237 LHRVEYDRLPPTEFVPAPGQGAIAVTARRDHENLDRIQDALDDPRTRVTTTVERTVLAEL 296
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C + I A +G ++ VL++DG+ SRN + N + A+ +
Sbjct: 297 GGGCIAPIGVHAKLQGEHVHVTARVLSTDGEEEVSASRNLPVHNHANAAAEFAESLASQG 356
Query: 301 NKNVF 305
++
Sbjct: 357 AADLI 361
>gi|284047314|ref|YP_003397654.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684]
gi|283951535|gb|ADB54279.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684]
Length = 314
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 98/290 (33%), Positives = 142/290 (48%), Gaps = 15/290 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A S L D + +IP++T GDR +G K +
Sbjct: 4 LRIGTRASALALVQAEHVASLLRDGGA----QVEVIPITTSGDRGR-----LLGDKSRWV 54
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L++ E+D AVHSAKD+P +L G ++ R D RD A SL+ L +
Sbjct: 55 KELEAALLADEVDVAVHSAKDVPAELPDGFVLAGVPARADARDALCG--AASLEQLPDGA 112
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR A L R D+ V+ RG ++TRL KL + +A AI+LA AG++RL + I
Sbjct: 113 VVGTSSLRRAAELRALRPDLGVVALRGNVDTRLRKLADGQAAAIVLAVAGLERLDRGAAI 172
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ P+PGQGA+ +ET ++ +A+ I D + ERA + L +C
Sbjct: 173 --GAVLDQLVPAPGQGALALETRADDDRARAAAAAITDADAAACLAAERALVRRLGATCH 230
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-DAINIGRDAA 293
+ + A L V DG + + D G A
Sbjct: 231 TPLGAHAVRTADGGLRLRSFVGLPDGSAWLRDELSAAAGIDPETFGVAAG 280
>gi|257076597|ref|ZP_05570958.1| porphobilinogen deaminase [Ferroplasma acidarmanus fer1]
Length = 285
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 91/265 (34%), Positives = 138/265 (52%), Gaps = 12/265 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR S LAL A + +L + + I ++ GD N L + G+F
Sbjct: 2 PVTIGTRNSKLALIQANSVKDALESR----GYEVNIKSYTSAGDSNKNIPLYRMSSTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++++ GEID AVHSAKD+P+ + KGL+I+A R+D RDV IS T L+++
Sbjct: 58 VDELNERVLKGEIDLAVHSAKDIPSNIQKGLEITAVTGRDDFRDVLISRT--PLEEMTAG 115
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSS+RR + +I+V D RG I+TR++K K I++A A KR+K +
Sbjct: 116 SVIGTSSMRRIRQAMTVNPEITVSDIRGNIDTRISKYTEKKYTGIIIAMAAYKRMKL-DI 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
IL+ E F P+P QG I I N+P + + IN +T+ + ER L+ C
Sbjct: 175 EHFILSEEQFLPAPNQGIIAIVGKSNSPASI-ISGEINDRETYRDMKNERFIATSLNLGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASD 269
+ + K + + D
Sbjct: 234 SMPVGILS--KDGKIKTR--FYSLD 254
>gi|288920172|ref|ZP_06414488.1| porphobilinogen deaminase [Frankia sp. EUN1f]
gi|288348422|gb|EFC82683.1| porphobilinogen deaminase [Frankia sp. EUN1f]
Length = 395
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ ++P R+GTR S LALA + +L + ++P+ T GDR +++IGG
Sbjct: 19 LTRRPLRLGTRRSALALAQSGHVAEALRARL---GCQVELVPIVTDGDRSQG-AISQIGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+SGEID AVHS KD+PT GL ++A PR D RDV +S + + L
Sbjct: 75 TGVFVSALREALLSGEIDLAVHSLKDLPTATPDGLVLAAVPPRVDTRDVLVSPSGRGLVK 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++ IGT + RR A L V+ RG ++TR+ K + + A++LA+AG+ RL
Sbjct: 135 LGPNARIGTGAPRRAAQLRAMGLGFDVVPIRGNVDTRIKKAIDGEVDAVILAHAGLARLD 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIET 207
+ + EI+ E P+PGQGA+ IE
Sbjct: 195 RLDAVTEIIPSEVILPAPGQGALAIEC 221
Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 17/109 (15%)
Query: 211 NPKAQELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC------------KG- 256
+ EL++ V++ + +V ERAFLA ++ C + + G
Sbjct: 281 DGGLAELLRFVLDDAPSSVAVRAERAFLAGIEAGCTAPVGALGRVLPSTGSSPTTGGDGA 340
Query: 257 ---STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
L +V A DG G+ D +G+ A + +
Sbjct: 341 PAVGDLRLRAVVAAPDGSRVLRCELTGSAVDPEALGQRLADEMLSAGAQ 389
>gi|290770684|emb|CAY79080.2| Hem3p [Saccharomyces cerevisiae EC1118]
Length = 239
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
MPT L +G ++ R D D + +SL DL ++GTSS+RR A L R
Sbjct: 1 MPTLLPEGFELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVGTSSVRRSAQLKRKYP 60
Query: 144 DISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201
+ RG I+TRL KL++ K I+LA AG+ R+ E I + + + + GQG
Sbjct: 61 HLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQG 120
Query: 202 AICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--L 259
A+ IE + K +++ I + ERA + L+G C I + T L
Sbjct: 121 ALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGGCSVPIGVESKYNEETKKL 180
Query: 260 YFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
IV+ +G E + D++ G+ A+ + K + +
Sbjct: 181 LLKAIVIDVEGTEAVEDEIEMLIENVKEDSMACGKILAERMIADGAKKILD 231
>gi|213616301|ref|ZP_03372127.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 168
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 69/164 (42%), Positives = 96/164 (58%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS 197
+ TRL KL+N AI+LA AG+KRL E I+ L + P+
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPA 168
>gi|182415288|ref|YP_001820354.1| porphobilinogen deaminase [Opitutus terrae PB90-1]
gi|177842502|gb|ACB76754.1| porphobilinogen deaminase [Opitutus terrae PB90-1]
Length = 284
Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats.
Identities = 85/262 (32%), Positives = 120/262 (45%), Gaps = 17/262 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K + TR SPLAL + L ++ L T GDR T +L + GGKGL
Sbjct: 2 KKLILATRKSPLALRQTEMVAAHLEARL---GVQTELLKLVTTGDRQTEWSLEQKGGKGL 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E+E L GE D AVHS KD+P + L ++ YLPR D RDV + +
Sbjct: 59 FTSELENALRRGEADLAVHSTKDLPGDMAAELAVAGYLPRADARDVLVLRAGVA-----A 113
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK-- 180
+ T S RR+ + + ++ + RG ++TRL K+ A +LA AG+ RL
Sbjct: 114 PKSLATGSPRRRLQIAKLYPGVTFTEIRGNVDTRLKKIGELGVADGTVLASAGLNRLGIG 173
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
V L D P+ GQGAI ++ + + T +V+ ERAF A
Sbjct: 174 NWPGVEFHALGFNDMVPAVGQGAIAVQCRAADA---ARFAPVFDAATKRAVDVERAFQAA 230
Query: 240 LDGSCKSAIAGFAYCKGSTLYF 261
L C++A G TL+F
Sbjct: 231 LGVGCQTAFGAH--VAGDTLHF 250
>gi|332186913|ref|ZP_08388654.1| porphobilinogen deaminase [Sphingomonas sp. S17]
gi|332012923|gb|EGI54987.1| porphobilinogen deaminase [Sphingomonas sp. S17]
Length = 210
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FR+GTR SPLAL A R++L D I I+P+ T GDR+ +R L EIGGK L+T
Sbjct: 4 FRLGTRGSPLALTQAHMVRAALADAQGWDEDAIEIVPIKTTGDRVQDRALAEIGGKALWT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+ GEID +VHS KD+ T L I+A LPR D+RD I A+++ +L +
Sbjct: 64 KELDRALLDGEIDASVHSMKDVETIRPDWLHIAAMLPRADVRDRLIG--AETIAELRPGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR+A LL R D+++ RG ++TRL KL + + A LLA AG+ RL +E +
Sbjct: 122 VVGTSSPRRRAQLLSHRPDLTITLLRGNVDTRLAKLASGEMDATLLAAAGLDRLGRE--V 179
Query: 186 KEILNIEDFPPSP 198
+ + P+P
Sbjct: 180 GHAVPTDQMLPAP 192
>gi|167535436|ref|XP_001749392.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772258|gb|EDQ85913.1| predicted protein [Monosiga brevicollis MX1]
Length = 643
Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 108/212 (50%), Gaps = 8/212 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E RIGTR S LA+ L H P ++PLST GD L +
Sbjct: 413 ESPHIRIGTRSSVLAMWQTRWVVERLTRAH--PGVRFSVVPLSTVGDANLTLDLNKFSTT 470
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QS 117
G+FT+ + + L++ E+D VHS KD+P+ + G Q++A PRED RDV + H +
Sbjct: 471 GIFTDALVRALLAQEVDILVHSLKDLPSTISPGTQLAAIGPREDPRDVVVFHHRHSEIKD 530
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175
L L +V+GTSS RR+A L + RG + TRL KL++ N A+ LA AG
Sbjct: 531 LAQLPAGAVVGTSSTRRRAQLAAAYPQLRFAPVRGNVMTRLRKLDDPANGYDALCLAAAG 590
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207
+ RL E I + L + + GQGA+ I+
Sbjct: 591 LIRLGLEARIGQFLPLTVSRHAIGQGALGIQV 622
>gi|257052010|ref|YP_003129843.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940]
gi|256690773|gb|ACV11110.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940]
Length = 373
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 90/367 (24%), Positives = 141/367 (38%), Gaps = 66/367 (17%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + FR+ TR S LAL R +L H + ++ + T GD + + + +
Sbjct: 1 MSSRATTFRLATRGSDLALRQTGAIRDALESRR----HEVELLEVETTGDELRDELIHRL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G F +++++ +GE D AVHS KD+PT+ +GL ++A R DV ++ L
Sbjct: 57 GKTGAFVHSLDERVRAGEADAAVHSLKDVPTEDREGLTVAAVPERAPANDVLVTPDGTDL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA------ 172
DL + +GTSSLRR+A LL R D+ V RG ++TR+ KL A A
Sbjct: 117 DDLPEGATVGTSSLRRRAQLLAERPDLDVQPLRGNVDTRVEKLLAPTLKAEYTARLDAQE 176
Query: 173 --------------------------YAGIKRLKKEKVIKEIL----------------- 189
+ G+ ++++ +E+
Sbjct: 177 SEETTENGDDETKATGQTFEQSFDDWFNGLAEIERKATAREVDTEYDAIVLAEAGLDRLG 236
Query: 190 ----------NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E F PSPGQG A+ + +I+ T ER L
Sbjct: 237 LTHHLDFQALPDEQFVPSPGQGV-VAVVAEEGEAAEAIRDIIDDARTRVEATVERTILET 295
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C + I A +G + VLA DG R D ++ R+ + +
Sbjct: 296 LGGGCVAPIGVRAVFQGRVVTTTVRVLAPDGTEEIADRRALPVEDHVDAARELGEDLADR 355
Query: 300 SNKNVFN 306
V
Sbjct: 356 GADEVIE 362
>gi|313896614|ref|ZP_07830163.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974799|gb|EFR40265.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 190
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 71/164 (43%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKKMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G+ID AVHS KDMP ++ GL I A R D D F+S+ ++++
Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPIEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164
L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+
Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAG 162
>gi|217073904|gb|ACJ85312.1| unknown [Medicago truncatula]
Length = 243
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 85/183 (46%), Positives = 115/183 (62%), Gaps = 4/183 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62
RIGTR SPLALA A ETR L+ H I I+ + T GD+I ++ L +IGGKG
Sbjct: 61 IIRIGTRGSPLALAQAHETRDKLIASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKG 120
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 121 LFTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLP 180
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGT+SLRRK+ +L +SV D FRG ++T L + + L+ + +RL
Sbjct: 181 AGSVIGTASLRRKSQILHRYPSLSVQDNFRGNVQTSLE-TSGGGCQSYLIGSSWTERLNM 239
Query: 182 EKV 184
++
Sbjct: 240 TEM 242
>gi|156101752|ref|XP_001616569.1| porphobilinogen deaminase [Plasmodium vivax SaI-1]
gi|148805443|gb|EDL46842.1| porphobilinogen deaminase, putative [Plasmodium vivax]
Length = 341
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 88/329 (26%), Positives = 147/329 (44%), Gaps = 69/329 (20%)
Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106
GD I ++ + GGKG+FT+E++++LI + VHS KD+P +L + +Q+S +L R+ I
Sbjct: 2 GDHILDKKVGLFGGKGIFTKELDEQLIKKNVHICVHSLKDVPMELPEHVQLSCFLKRDTI 61
Query: 107 RDVFISHTAQSLKDLALHS---------------------------------------VI 127
D F+S +L+D+ I
Sbjct: 62 NDAFLSVKYATLEDMNKRKMANKVEEESDQEKGTIQQMTNQGLKRDNCEGDKCTNFIPTI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR + + +++V + RG I TR+ KL N + AI++A G++RL +KV++
Sbjct: 122 GTSSLRRSSQIKYTYKNVAVKNVRGNINTRIAKLCNGQYDAIIIAKCGLERLLTKKVVRN 181
Query: 188 IL------NIEDFP------------------------PSPGQGAICIETHVNNPKAQEL 217
I+ E F P+ QG I + +H N+ +
Sbjct: 182 IIRGKGKVPPEKFLLNHNDMETNLRLLRIQQINRRTIYPALCQGIIAVTSHKNDVDTSNI 241
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+K IN E N ER+FL +++G+C I G+A G + F ++ + G+ + V
Sbjct: 242 LKNINDEKAQIMANVERSFLYQIEGNCMMPIGGYAQIVGGEIVFNAVINDTHGREKYHVR 301
Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G + NI AA ++ + FN
Sbjct: 302 EVGTVQNCNNIAAMAATKMKEKIGTHRFN 330
>gi|294653592|ref|NP_714555.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str.
56601]
gi|293630693|gb|AAN51570.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str.
56601]
Length = 542
Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 124/313 (39%), Gaps = 40/313 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +IG+R S LA + +L K P + + GD+ L ++G
Sbjct: 1 MS-RILKIGSRKSALAKLQTYLVLGALKK--KFPEIQVELFFREASGDQDLQTPLWKMGT 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+FT+++ L+ ++D +HS KD+ + I L R D RDV + + K
Sbjct: 58 KGVFTQDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKY 117
Query: 121 LALHSVIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAIL 170
I TSS RR+ L ++ S + + RG I+TR+ K + + ++
Sbjct: 118 SPSVLKIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLV 177
Query: 171 LAYAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETH 208
LA A + RL ++ + +I + P +PGQGAI E
Sbjct: 178 LAKAALDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVR 237
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYGIVL 266
+ + ++ ++ + +V ER L G C I G LY G+
Sbjct: 238 TEDNWVLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGVSILQKAYGKILYQRGL-- 295
Query: 267 ASDGKIFHEVSRN 279
SD EV
Sbjct: 296 -SDSGEVLEVEEQ 307
>gi|45655592|ref|YP_003401.1| porphobilinogen deaminase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602563|gb|AAS72038.1| porphobilinogen deaminase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 547
Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 74/311 (23%), Positives = 123/311 (39%), Gaps = 39/311 (12%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +IG+R S LA + +L K P + + GD+ L ++G KG
Sbjct: 7 SRILKIGSRKSALAKLQTYLVLGALKK--KFPEIQVELFFREASGDQDLQTPLWKMGTKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+++ L+ ++D +HS KD+ + I L R D RDV + + K
Sbjct: 65 VFTQDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKYSP 124
Query: 123 LHSVIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAILLA 172
I TSS RR+ L ++ S + + RG I+TR+ K + + ++LA
Sbjct: 125 SVLKIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLVLA 184
Query: 173 YAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETHVN 210
A + RL ++ + +I + P +PGQGAI E
Sbjct: 185 KAALDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVRTE 244
Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYGIVLAS 268
+ + ++ ++ + +V ER L G C I G LY G+ S
Sbjct: 245 DNWVLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGVSILQKAYGKILYQRGL---S 301
Query: 269 DGKIFHEVSRN 279
D EV
Sbjct: 302 DSGEVLEVEEQ 312
>gi|148693634|gb|EDL25581.1| mCG10727, isoform CRA_b [Mus musculus]
Length = 208
Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H K L
Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL-- 134
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKE 182
RG + TRL KL+ + AI+LA AG++R+ +
Sbjct: 135 ------------------------ETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQ 170
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
+ +IL+ E+ + GQ A+ +E + +LV V
Sbjct: 171 NRVGQILHPEECMYAVGQVALAVEVRAKDQDILDLVSV 208
>gi|307254893|ref|ZP_07536715.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306862134|gb|EFM94106.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
Length = 174
Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 82/167 (49%)
Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198
+ + V RG + TRL+KL+N + AI+LA AG+ RL + I+ +++E P+
Sbjct: 1 MAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMPERIRSFISVEQSLPAA 60
Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
GQGA+ IET V++ + + +NH T V ERA L G C+ I GFA G+
Sbjct: 61 GQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQGGCQVPIGGFATLNGNE 120
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +V A DG S +R +A +G A+ + +
Sbjct: 121 ITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGADKIL 167
>gi|261884538|ref|ZP_06008577.1| porphobilinogen deaminase [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 174
Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats.
Identities = 75/171 (43%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94
H++ IIP+ TKGD I + L +IGGKGLF++E+E ++ G D AVHS KD+PT G
Sbjct: 5 GHSVEIIPMKTKGDVILDTPLAKIGGKGLFSKELETSMLEGSADIAVHSLKDVPTTFPDG 64
Query: 95 LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154
L+++ RED+RD +S ++L +L + +GT+SLRRK +L R+D+ +I RG +
Sbjct: 65 LKLACVCSREDVRDAMLSMKYKNLDELPQGAKVGTTSLRRKMQILAHRADLDIISLRGNV 124
Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205
+R+ KL N + AI+LA AGI RL + K K L+I P+ GQGA+ I
Sbjct: 125 NSRIAKLKNGEFDAIILAMAGINRLNRSKDDKATLSINT-IPAMGQGALGI 174
>gi|116329566|ref|YP_799285.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116122459|gb|ABJ80352.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
Length = 542
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 40/313 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I +R S LA + +L K P I + GD L ++G
Sbjct: 1 MS-RVLKIASRKSALAKLQTYLVLDALKK--KFPNIQIELHFREASGDLDLQTPLWKMGT 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+FT+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+
Sbjct: 58 RGVFTQDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKN 117
Query: 121 LALHSVIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAIL 170
I TSS RR+ L ++ S + + RG I+TR+ K N+ + ++
Sbjct: 118 FPSELKIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWRNSDSDGLV 177
Query: 171 LAYAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETH 208
LA A + RL E+ I ++L + P +P QGAI E
Sbjct: 178 LAKAALDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVR 237
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266
++ A V+ ++ + +V ER L G C I K G LY G+
Sbjct: 238 TDDEWALGFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGL-- 295
Query: 267 ASDGKIFHEVSRN 279
+D E+
Sbjct: 296 -TDSGEILEIEEQ 307
>gi|116332455|ref|YP_802172.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
gi|116127322|gb|ABJ77414.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 542
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 40/313 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I +R S LA + +L K P I + GD L ++G
Sbjct: 1 MS-RVLKIASRKSALAKLQTYLVLDALKK--KFPNIQIELHFREASGDLDLQTPLWKMGT 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+FT+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+
Sbjct: 58 RGVFTQDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKN 117
Query: 121 LALHSVIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAIL 170
I TSS RR+ L ++ S + + RG I+TR+ K N+ + ++
Sbjct: 118 FPSELKIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWGNSDSDGLV 177
Query: 171 LAYAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETH 208
LA A + RL E+ I ++L + P +P QGAI E
Sbjct: 178 LAKAALDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVR 237
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266
++ A V+ ++ + +V ER L G C I K G LY G+
Sbjct: 238 TDDEWALSFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGL-- 295
Query: 267 ASDGKIFHEVSRN 279
+D E+
Sbjct: 296 -TDSGEILEIEEQ 307
>gi|19849545|gb|AAL12221.1| porphobilinogen deaminase [Triticum aestivum]
Length = 198
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 77/156 (49%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A +TR L H + I II + T GD I ++ L +IGGKGL
Sbjct: 43 IRIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIIIIKTTGDMILDKPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L
Sbjct: 103 FTKEIDDALLEGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPA 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
SVIG++SLRR++ +L + V++FRG ++TRL
Sbjct: 163 GSVIGSASLRRQSQILYKYPSLKVVNFRGNVQTRLR 198
>gi|56752693|gb|AAW24560.1| SJCHGC02909 protein [Schistosoma japonicum]
Length = 268
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+G+R S LAL S L P ++ ++T GD I + L++IG K
Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L
Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164
DL + + +GTSS+RR A L+R + I RG + TRL KL+
Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205
A++LA AG++R+ I ++L+ D + QGA+
Sbjct: 184 SYDALILAKAGVERMGWVDRIDQVLS--DSFYAVSQGALAA 222
>gi|147899551|ref|NP_001088263.1| hydroxymethylbilane synthase [Xenopus laevis]
gi|54038668|gb|AAH84265.1| LOC495094 protein [Xenopus laevis]
Length = 256
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 30/233 (12%)
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
+ + +L L SVIGTSSLRR A L + + D RG + TRL KL+
Sbjct: 14 HMMPWCFTLKKSGNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLD 73
Query: 163 NNK-AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
+ AI+LA AG++R+ E I +IL ++ + GQGA+ +E + +V +
Sbjct: 74 EQEDFSAIVLAAAGLRRMGWENRIGQILTSDECLYAVGQGALAVEVRTKDQDILSMVSAL 133
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK---------- 271
+T ERAF+ L+G C +A K LY G V + DG
Sbjct: 134 QDPETVLRCVAERAFMKRLEGGCSVPVAVSTVVKDLQLYLTGAVYSLDGSDSLKETMQSC 193
Query: 272 -IFHEVSRNGNRCD------------------AINIGRDAAQYIRFISNKNVF 305
F + G D A +G A + K +
Sbjct: 194 VNFLQQEVEGPNDDVQHVGITALGVSQQALESAQCLGTGLADLLLSKGAKEIL 246
>gi|58699795|ref|ZP_00374427.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58533687|gb|EAL58054.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 199
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 107/202 (52%), Gaps = 6/202 (2%)
Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
L R D FISH SL+ L + I TS++RRK LL +R D++++ RG + TR
Sbjct: 1 CVLERLSPCDAFISHKHNSLESLPQQATIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR- 59
Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218
L N I+LA AG+ RL+K +I E+L + + GQGAICI+ N+ K +L+
Sbjct: 60 --LQNQSFDGIILAEAGLIRLEKHHLITEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLL 117
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVS 277
+ IN+ ++ V ER+F+ ++GSC + +A A + LY ++ DGK +
Sbjct: 118 EKINNNMSFIGVKSERSFMKTVNGSCFTPLAALAEYVSENMLYLRCMLA--DGKNIYFTE 175
Query: 278 RNGNRCDAINIGRDAAQYIRFI 299
R DA +G DA ++
Sbjct: 176 RTSFIEDAEKMGMDAGLELKSK 197
>gi|3172397|gb|AAC18581.1| porphobilinogen deaminase [Brevibacillus brevis]
Length = 151
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF +
Sbjct: 5 KVGTRRSKLALTQTNWVVDKLK--GFAPEADFELHEIVTKGDRILDVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L E D AVHS KDMP +L +GL I A R D RDV +S ++L +L ++
Sbjct: 63 EIEQSLFDKETDFAVHSLKDMPAELPEGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGAL 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIE 155
+GTS+LRR A +L R DI + RG I+
Sbjct: 123 VGTSTLRRSAQILAHRPDIQIESLRGNID 151
>gi|253787595|dbj|BAH84857.1| putative porphobilinogen deaminase [Cucumis sativus]
Length = 188
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 86/187 (45%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EI+ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A S +L S+
Sbjct: 1 EIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSI 60
Query: 127 IGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT+SLRRK+ LL + V++ FRG ++TRL KLN A LLA AG++RL + +
Sbjct: 61 IGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENV 120
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
IL+I++ P+ QGAI I ++ + +NHE+T +V CERAFL LDGSC+
Sbjct: 121 TSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSCR 180
Query: 246 SAIAGFA 252
+ IAG
Sbjct: 181 TPIAGIT 187
>gi|183220566|ref|YP_001838562.1| porphobilinogen deaminase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910676|ref|YP_001962231.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167775352|gb|ABZ93653.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778988|gb|ABZ97286.1| Porphobilinogen deaminase (PBG; Hydroxymethylbilane synthase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 511
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 40/317 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +IG R S L+ ++L + +K N I + GD+ L + GG
Sbjct: 1 MSE-TIKIGGRSSLLSRIQIHTVTNALKEKNK--DLNFETIFRESSGDKDLTTPLWQFGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+FT+++++ L++ ++D +HS KDM K K + LPRED+RDV + + + +
Sbjct: 58 QGIFTKDLQEDLLNHKVDIVIHSYKDMDLKERKETTLIPVLPREDVRDVLLFKKNKWI-N 116
Query: 121 LALHSVIGTSSLRRKA----LLLRWRS------DISVIDFRGKIETRLNKLNNNKAHAIL 170
L I TSS RR+ L + +I + RG I+TRL K ++++ IL
Sbjct: 117 LPNEITILTSSPRREYHIKEFLRNYFPTPINNFEIKIESVRGNIQTRLRKYLDHESGGIL 176
Query: 171 LAYAGIKR-LKKEKVI---------------------KEILNIEDFPPSPGQGAICIETH 208
+A A + R L + +L FP +P QGA+C E
Sbjct: 177 VAKAALDRILNFQDPDQLLPELKEIQQLIKDTMNVSLFMVLPSSIFPSAPAQGALCAEIR 236
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266
+ + L+ I+ +T + N ER L+ G C I + G + GI
Sbjct: 237 KEDKHLETLLSKISDSETNLTTNEEREILSRYGGGCHQKIGVTVLHREYGKVCFIRGI-- 294
Query: 267 ASDGKIFHEVSRNGNRC 283
DG+I + +
Sbjct: 295 TEDGQILQTKELSESPN 311
>gi|322694171|gb|EFY86008.1| porphobilinogen deaminase Hem3, putative [Metarhizium acridum CQMa
102]
Length = 654
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 33/263 (12%)
Query: 63 LFTE-----EIEKKLISGEIDC-AVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
L+T+ E+KL SG+ V S D+P R+D RD +
Sbjct: 87 LWTKKPMDSRAEEKLTSGQWTLSCVVSKTDIPL-------------RDDPRDALVVKAGL 133
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
SL+ L +V+GTSS+R A L R + + RG ++TRL K+ + ++ +++
Sbjct: 134 AYTSLQTLPPGAVVGTSSVRHSAQLRRLYPHLRFSNLRGNVDTRLAKVEDPESEYTCMIM 193
Query: 172 AYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+ AG++R+ + I + L +D + GQGA+ +E + K + V + + +
Sbjct: 194 SAAGLERVGLKSRISQYLGSKDGGILHAVGQGALGLEIRKGDSKTLQFVNQLGDRKSTLA 253
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNG---NR 282
ERA L L+G C I G L IV++ DG E S +
Sbjct: 254 SLAERALLRALEGGCSVPIGVETEWIGQSEHQVLRMKAIVVSLDGTECVERSIDAMLLTN 313
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
A +GRD A + + +
Sbjct: 314 DQASQLGRDLAARLIDGGAEKIL 336
>gi|4884830|gb|AAD31824.1|AF131199_3 porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5]
Length = 144
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDIS 146
L S++GTSSLRR+A LL R D+
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQ 144
>gi|330945695|gb|EGH47153.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 191
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWR 142
L S++GTSSLRR+A LL R
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARR 140
>gi|297180547|gb|ADI16759.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0010_11B23]
Length = 292
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 80/252 (31%), Positives = 125/252 (49%), Gaps = 10/252 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL D++K N I T+GDR + + K F
Sbjct: 1 MRIATRSSKLALKQ----VDIFKDLYKTQEINFEIKTQITEGDRKSKKGENLF-DKAHFV 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++E L++ + D A+HS KDM +GL+I A + + DV + +L DL +
Sbjct: 56 EDLESSLLNYDADIAIHSLKDMSCHDTEGLEIYAAIEHQSRSDVMVYKDQINLNDL-ANI 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR + + + + RG I+TRL KL+ +K AI+LA AGI+RL
Sbjct: 115 KIGTSSLRRTRQCKHFLKNNNCSEIRGNIDTRLLKLHEDKFDAIILAKAGIERLGLNVNF 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ DF P+ GQG I ++ ++ K + L+ I + + + ER + L+ +C
Sbjct: 175 IDL----DFLPAIGQGIIAVQCRSDDKKTKTLLDQIKNFELLQMIEIERRIVRNLNATCN 230
Query: 246 SAIAGFAYCKGS 257
SA++ + G
Sbjct: 231 SALSIRSKIDGD 242
>gi|168705543|ref|ZP_02737820.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246]
Length = 140
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 62/142 (43%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGPKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWR 142
L L S++GTSSLRR+A LL R
Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRR 140
>gi|226294065|gb|EEH49485.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb18]
Length = 249
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 17/233 (7%)
Query: 92 LKGLQISAYLPREDIRDVFISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
+ A +PRED RDV + +L +L SV+GTSS+RR A L R +
Sbjct: 7 PNPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQ 66
Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAIC 204
D RG IETRL KL+ + I+LA AG+ R + I L+ ++ + GQGA+
Sbjct: 67 DIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARISHFLDSKNGKMLHAVGQGALG 126
Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST------ 258
+E ++ + + +++ I + ER+ L L+G C + +
Sbjct: 127 VEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGGCSAPLGVETEWVKGEGQGEVE 186
Query: 259 -LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFNF 307
L IV + DGK EV + +A G+ A+ + +
Sbjct: 187 KLRLRAIVASVDGKEAVEVEMEAEIRSEAEAEWFGKTVAEELIVKGAGKILEV 239
>gi|25010019|gb|AAN71175.1| GH12864p [Drosophila melanogaster]
Length = 558
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 95 LQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151
+ I A L RED RD + ++ L SVIGTSSLRR A + R ++V D R
Sbjct: 1 MAIGAVLEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIR 60
Query: 152 GKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
G + TRL KL+ ++K I+LA AG+ R+ I ++L D + GQGA+ +E
Sbjct: 61 GNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRA 120
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS---------TLY 260
N+ + +++ + +T + ER+FL L G C + +A ++ KG L
Sbjct: 121 NDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLS 180
Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
G V + DG I + + R +
Sbjct: 181 LTGAVWSLDGAIEIRNHLACALNE-----QKLEGDQRKRGAQE 218
>gi|225016972|ref|ZP_03706164.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum
DSM 5476]
gi|224950286|gb|EEG31495.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum
DSM 5476]
Length = 292
Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 126/301 (41%), Gaps = 26/301 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKG-DRITNRTLTEIG 59
MEK IG + L+ A L H P ++P+ G D
Sbjct: 12 MEK--IHIGCAQNELSRNFADHLAQCLHSYH--PELTAELVPIKNTGADEEPT------- 60
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
L +E+ LI +D AV+ A D+P +L L I A RED+RD + +
Sbjct: 61 ---LVARRLEQALIDCRVDLAVYHALDLPLELHPELPIVAISSREDVRDALVFPQGKQQP 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
D IG +S R++ L R D G + +L +L+ + A++L A +
Sbjct: 118 DF--SKPIGCTSRRQQVQLHRVFPDCITAPVGGTVAEQLARLDQGEYGALVLPAAQLGWF 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ + ++ +E+ P+ G AI ++ L++ + D+WD+V CER F
Sbjct: 176 GLQQRVGQLFCVEELVPAAGHAAIAVQAREEFD--AGLLECFHSWDSWDAVFCEREFARA 233
Query: 240 LD---GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L+ G IA A KG TL G I+ S +G+R DA +G + A +
Sbjct: 234 LEEEPG----PIAVHAEVKGETLSVVGFYADEAEGIYRMSSMSGDRKDAGRLGFELAAEL 289
Query: 297 R 297
+
Sbjct: 290 K 290
>gi|29841142|gb|AAP06155.1| similar to GenBank Accession Number P19356 hydroxymethylbilane
synthase (hemC) in Rattus sp [Schistosoma japonicum]
Length = 277
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+G+R S LAL S L P ++ ++T GD I + L++IG K
Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L
Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164
DL + + +GTSS+RR A L+R + I RG + TRL KL+
Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183
Query: 165 KAHAILLAYAGIKRLKKEKVIKE 187
A++LA AG++R+ I +
Sbjct: 184 SYDALILAKAGVERMGWVDRIDQ 206
>gi|167835847|ref|ZP_02462730.1| porphobilinogen deaminase [Burkholderia thailandensis MSMB43]
Length = 159
Score = 194 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGK 153
+V+GTSSLRR+A+L + V RG
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGN 159
>gi|87886445|dbj|BAE79637.1| porphobilinogen deaminase [Danio rerio]
Length = 203
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/185 (40%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA L +++ P I+ +ST GD+I + L++IG K
Sbjct: 17 SRVIRVGTRKSQLARIQTDSVVEKLKELY--PDVLFEIVAMSTTGDKILDTALSKIGEKS 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L
Sbjct: 75 LFTKELENALEKNEVDLVVHSLKDLPTVLPGGFTIGAVLKRENPHDAVVLHPKNKGKRLD 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
L+ SVIGTSSLRR A L + + D RG + TRL KL+ N AI+LA A KR
Sbjct: 135 SLSNKSVIGTSSLRRAAQLKKRXXHLEFKDIRGNLNTRLKKLDEXNDFSAIILAAAXXKR 194
Query: 179 LKKEK 183
+ E
Sbjct: 195 MGWEN 199
>gi|297622583|ref|YP_003704017.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093]
gi|297163763|gb|ADI13474.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093]
Length = 284
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 20/285 (7%)
Query: 16 ALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75
ALA A + L + P + I+ RTL GG +E+ L G
Sbjct: 14 ALAQARAVLAELSE--GWPDVS------------ISQRTLQSRGG----ADELLHALQGG 55
Query: 76 EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRK 135
I AV S +P L GL ++A R + R ++ A+SL DL + +G +LR +
Sbjct: 56 RIHIAVQSLDTLPLTLPDGLSVAAVTKRLEPRSALLARGAKSLGDLPKGAEVGVPTLRDR 115
Query: 136 ALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195
A +L R D+ V F G++E L L+ + A++ A +L + + + +L + P
Sbjct: 116 AFVLAARRDLKVRVFTGELEDALALLSAQELGALVWPSAPFIQLGQRERVTTLLEPQQLP 175
Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
P+PGQGA+ + ++ A +L + H ++D ERAF ++ S I FA
Sbjct: 176 PAPGQGALALVVRDDDDLASDLAYTLQHRPSFDRACAERAFARQMSSSAHH-IGAFASVT 234
Query: 256 -GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+ G +G + G+ +A +GR+ AQ +
Sbjct: 235 ADGELHLLGAAARDEGDWMIQAEVTGDAAEAEELGRELAQDVLEQ 279
>gi|307826231|ref|ZP_07656440.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732693|gb|EFO03561.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 155
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 82/151 (54%)
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +++P+
Sbjct: 1 TRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIDDPEIN 60
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
E++ ++ +T V ERA A L G C+ IAGFA +G L+ G+V + DG + +
Sbjct: 61 EMLSALHDSETGLCVAAERAMNARLSGGCQVPIAGFATMQGEQLFMRGLVGSPDGSVIYR 120
Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
R + A IG+ A+ + +
Sbjct: 121 AERTDSVDSAEAIGKMIAEDLLAQGADEILQ 151
>gi|159483239|ref|XP_001699668.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
gi|158281610|gb|EDP07364.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
Length = 380
Score = 191 bits (487), Expect = 9e-47, Method: Composition-based stats.
Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 46/328 (14%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLS--TKGDRITNRTLTEIGG 60
++P I TR S LA + + L+ ++ + + L ++GD +L +G
Sbjct: 60 QRPLVIATRPSKLAKEQTRQVQQLLLAAAQLKDEQLQLSTLELASRGDTTQGVSLRSLG- 118
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G FTEE+++ ++SG D +VHS KD P L GL ++A LPR D RDV I+ A SL +
Sbjct: 119 SGAFTEELDQAVLSGAADMSVHSLKDCPAALAPGLLLAACLPRADPRDVLIAPEATSLGE 178
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSS RR A + + V+ RG +++RL ++ + A +LA AG+KRL
Sbjct: 179 LVPGSRVGTSSSRRAAQIKHSFPHLQVVQLRGNVDSRLGRIRSRDIGATVLAAAGLKRLG 238
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER------ 234
D + GA+ + ++ L+ I+H T V ER
Sbjct: 239 VMN--------SDEGDTTATGAVGVVCRADDEWVVGLLDAISHRGTALEVAAERACLAAL 290
Query: 235 ----------AFLAELDGSCKSA-I--AGFAYCKGS--TLYFYGIVLASDGKIFHEVSR- 278
AF I A T+ +V +GK +
Sbjct: 291 LGGGGACQRSAF----------PDIAWACHTRHDPDSNTMDLDCLVADLEGKELFRYTEF 340
Query: 279 ---NGNRCDAINIGRDAAQYIRFISNKN 303
+ DA+++G +R ++
Sbjct: 341 YRPVIDEVDAVSLGSLYGSLLRMMAPPG 368
>gi|238488537|ref|XP_002375506.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357]
gi|220697894|gb|EED54234.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357]
Length = 230
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
MPT L +++A PR+D RD I L SL A+L R +
Sbjct: 1 MPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSL--------KSLPEGAVLRRLYPHLR 52
Query: 147 VIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGA 202
+ RG +ETRL K++ +++ ++++ AG++R+ E I + L +D + GQGA
Sbjct: 53 FANLRGNVETRLAKVDNSDSEYTCMVMSAAGLERVGLEHRISQYLGSKDGGILHAVGQGA 112
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYF 261
+ +E + K QEL+ + + + + ER+ + L+G C + I L
Sbjct: 113 LGLEIRKGDRKMQELLGQLADQRSTLACLAERSLMRTLEGGCSAPIGVETEWISAGALSI 172
Query: 262 YGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISNKNVFN 306
+ IV++ DG E + N +A +G++ A + V N
Sbjct: 173 HAIVVSLDGTKSVEDTIVSNVKTVEEATALGKELAARLVKAGAGEVLN 220
>gi|307719295|ref|YP_003874827.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM
6192]
gi|306533020|gb|ADN02554.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM
6192]
Length = 672
Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 113/236 (47%), Gaps = 12/236 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLS--TKGDRITNRTLTEIGGK 61
+ R+GTR S LALA E + D + P+ +GDR L + G
Sbjct: 2 RVLRLGTRGSRLALAQVREWIARWRDASPEAG-EVEWEPMVLHPRGDRDKRTPLHLVEGS 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHT----AQ 116
FT+ +++ L+ G ID A+HSAKD+P +L +GL ++A P E R DV + H A
Sbjct: 61 DFFTDALDEALLEGRIDVALHSAKDLPDELREGLSLAAITPLEGPREDVLVLHPRWASAS 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
S+ +L IGTSS RR+ L RSD ++D RG IE RL ++++ + +++A +
Sbjct: 121 SVDELPAGLRIGTSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAKVAL 180
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
RL E F P P QG + + + + L V++ W V
Sbjct: 181 TRLALE----VPHLPLPFVPHPLQGRLAAVVREGDEEVRRLCAVLDDRGRWGRVAI 232
>gi|322782664|gb|EFZ10527.1| hypothetical protein SINV_04722 [Solenopsis invicta]
Length = 331
Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Query: 103 REDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
RED RD + ++L L SVIGTSSLRR A L R + + + RG + TRL
Sbjct: 44 REDPRDAVVMSKKFKDKTLSSLPKGSVIGTSSLRRSAQLSRNMPHLKIENIRGNLNTRLK 103
Query: 160 KLNN--NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
KL++ AI+LA AG+KR+ E I ++L E+ + GQGA+ +E ++ + + L
Sbjct: 104 KLDDENGPYAAIILAAAGLKRMGWEDRISQLLEPEEALYAVGQGALGVECRQSDWEIRSL 163
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
++ + +T CER+FL L G C + +A + K + L G V + DG+ +
Sbjct: 164 LEPLFDLETTLRCVCERSFLKTLGGGCSAPVAVSSSLKENELTITGAVWSLDGQTLITDT 223
Query: 278 R 278
Sbjct: 224 I 224
>gi|47200553|emb|CAF87716.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 97/200 (48%), Gaps = 30/200 (15%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT+E+E L
Sbjct: 1 SQLARIQTDSVAEKLKELY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFTKELENAL 58
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGT 129
E+D VHS KD+PT L G I A L RE+ D + H ++L L HSVIGT
Sbjct: 59 ERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGT 118
Query: 130 SSLRRKALLLRWRSDISVIDF------------------------RGKIETRLNKLNNNK 165
SSLRR A L + + D RG + TRL KL+ +
Sbjct: 119 SSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKE 178
Query: 166 -AHAILLAYAGIKRLKKEKV 184
AI+ A AG++R+ +
Sbjct: 179 DFAAIISAAAGLRRMGWDNR 198
>gi|119587852|gb|EAW67448.1| hydroxymethylbilane synthase, isoform CRA_b [Homo sapiens]
Length = 171
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 57/150 (38%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF 150
L SV+GTSSLRR A L R +
Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSI 166
>gi|297620494|ref|YP_003708631.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia
chondrophila WSU 86-1044]
gi|297375795|gb|ADI37625.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia
chondrophila WSU 86-1044]
Length = 472
Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ + R SPL+ A E P + ++T GDR +L +
Sbjct: 54 LSTNRITVAARSSPLSEAQVDEI--LYEAQLIQPTLEFEVTLVTTLGDRDQESSLRTLEK 111
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
FT +I++ L++G AVHSAKD+P + GL I A D D + +L
Sbjct: 112 TDFFTRDIDQLLLNGYCRIAVHSAKDLPDPIPNGLNIIAVNQGLDPSDSLVMRPGDTLSS 171
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + I TSS+RR+ + RSD+ V+D RG I RL KLN+ + +++A + + RL
Sbjct: 172 LPKGAKIATSSIRREKAVHSLRSDLEVVDIRGNIGQRLQKLNDREVDGVIVAESALIRLN 231
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
+ + L E +PGQG + + ++ +A ++
Sbjct: 232 LYHLNRIHLPGET---APGQGKLAVVAREDDEEAAVFFSAMDQRP 273
>gi|209732910|gb|ACI67324.1| Porphobilinogen deaminase [Salmo salar]
Length = 174
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K
Sbjct: 17 NRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE D + H +L
Sbjct: 75 LFTKELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLD 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDF 150
L SVIGTSSLRR A L + + D
Sbjct: 135 TLPDGSVIGTSSLRRAAQLKKRFPHLEFKDI 165
>gi|42524803|ref|NP_970183.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100]
gi|39577013|emb|CAE78242.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100]
Length = 502
Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 33/316 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S LA A+ +L + K P I + GD+ L +I KG+FT
Sbjct: 3 LRISARKSDLARLQAYMVGDALKE--KNPQIEIDYRFRESLGDKNLTDPLWKIPEKGVFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
E+ +L+ E D VHS KD+PT+ I+A LPR D RD+ + +
Sbjct: 61 EDFFGELLRDETDLVVHSWKDLPTEHKSETVIAATLPRADQRDLLLVKKSHFDKIKTSKT 120
Query: 125 SVIGTSSLRRKALLLRWRS--------DISVIDFRGKIETRLNKLNNN-KAHAILLAYAG 175
+ +SS RR+ L + D+ RG + TR+ KL + + +++A A
Sbjct: 121 LKVFSSSPRREYNLTGFFKEHLPFGLQDVKFESVRGNMLTRVRKLIESPETDGLIVAKAA 180
Query: 176 IKRL----------KKE-------KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218
RL ++ ++ +L + P + QGA+ +E + Q+L+
Sbjct: 181 FDRLFSATLPEFLEGQQQLRQYFNELNWVVLPLSVNPNAAAQGALAVEVLKSRQDLQDLL 240
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFYGIVLASDGKIFHEV 276
+ I+H DT+ ER L+ G C I A G G+ G++ +
Sbjct: 241 QSIHHADTFHCSQKERDVLSSFGGGCHQKIGVAVLARPYGQITLLKGL--TDAGQVLDKR 298
Query: 277 SRNGNRCDAINIGRDA 292
N +D
Sbjct: 299 ELKLNNPAPQFAAQDL 314
>gi|254380811|ref|ZP_04996177.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1]
gi|194339722|gb|EDX20688.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1]
Length = 231
Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR SP+AL + P + I+ + ++GDR L+ IGGKG F
Sbjct: 10 TVRLGTRPSPMALEQTGRFADVFRA--RYPQVVLDIVEIVSEGDRHRG-PLSTIGGKGAF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
T ++ L+ G + + AKD+P G+ I+A LPRED RD + H +L
Sbjct: 67 TRNADRYLLDGRVQATIACAKDVPGPHDRSPGIVIAAVLPREDTRDALVLPTGHPVTTLA 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177
+L + +GTS+ RR ALL + + RG ++RL L+ + A ++ A AG++
Sbjct: 127 ELPPGTRVGTSAPRRSALLKALHPTLVQVPIRGNADSRLRALDAGRLGADVMIAALAGLR 186
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
RL E EIL+ + P+ G G + +E ++P L+ +
Sbjct: 187 RLGHEDRASEILDPAVWLPAAGAGTVIVEHRSDDPATGWLLAPL 230
>gi|167718597|ref|ZP_02401833.1| porphobilinogen deaminase [Burkholderia pseudomallei DM98]
Length = 142
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 57/132 (43%), Positives = 86/132 (65%), Gaps = 2/132 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPVG 130
Query: 125 SVIGTSSLRRKA 136
+V+GTSSLRR+A
Sbjct: 131 AVVGTSSLRREA 142
>gi|329942690|ref|ZP_08291469.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci Cal10]
gi|332287285|ref|YP_004422186.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC]
gi|313847869|emb|CBY16864.1| putative porphobilinogen deaminase [Chlamydophila psittaci RD1]
gi|325506761|gb|ADZ18399.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC]
gi|328814950|gb|EGF84939.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci Cal10]
gi|328914531|gb|AEB55364.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci 6BC]
Length = 245
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 7/231 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ ++P RI +R S LA A E L P I I +ST+GD+ L +
Sbjct: 16 LGRRPLRIASRKSTLAQAQVHECVRLLRSW--FPKLWIQIHTISTRGDKDKTTPLRLVEN 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
FT+ ++K +I G AVHSAKD+P + A D D+ + K
Sbjct: 74 SQFFTDAVDKLVIRGNCHLAVHSAKDLP--DPPATPVVAITKGLDPSDLLVYAERYLWKR 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+G+SSLRR L + ++D RG IE RL +L N K AI++A A I RL
Sbjct: 132 FPKVPRLGSSSLRRGETLKTLFPEGRILDIRGTIEERLEQLENGKYDAIVIAKAAILRLH 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
++L P P QG + I + + + +N T
Sbjct: 192 LHLPYTKVLPP---PYHPLQGRLAITAGKDIEAWKTFLLPLNTATTSQETL 239
>gi|89898473|ref|YP_515583.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56]
gi|89331845|dbj|BAE81438.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56]
Length = 243
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ ++P RI +R S LA A +E L P I I ++T+GD+ L I
Sbjct: 16 LGRRPLRIASRKSTLAKAQVYECVRLLRSW--FPKLWIQIQTVNTQGDKDKTTPLRLIEN 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
FT+ ++K ++SG AVHSAKD+P I A D D+ + K
Sbjct: 74 SQFFTDAVDKLVLSGNSHLAVHSAKDLPN--PPVTTIIAITQGLDPADLLVYGNRYLWKR 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +G+SSLRR+ +L + ++ RG IE RL +L + K AI++A A RL
Sbjct: 132 FPKNPKLGSSSLRREEILKKLFPAGKILHIRGTIEERLEQLESGKYDAIIVAKAAALRLH 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ E L P P QG + + N ++L+ +N
Sbjct: 192 LKLPYTEELPP---PYHPLQGRLSVTAAKNIESWKKLLYPLN 230
>gi|55379657|ref|YP_137507.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049]
gi|55232382|gb|AAV47801.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049]
Length = 389
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 77/372 (20%), Positives = 137/372 (36%), Gaps = 73/372 (19%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + ++ TR S LAL A R SL + ++ + T GD+I + + +
Sbjct: 1 MTTRGETLQLATRGSDLALRQAATVRDSLSSRR----LAVELVEVETTGDQIRDELIHRL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTK---------------------------- 90
G G F +++K++ GE+D AVHS KDMPT+
Sbjct: 57 GKTGAFVRSLDEKVLDGELDAAVHSMKDMPTERPERLVVAAVPERAAAEDVLVTPDGRSL 116
Query: 91 --LLKGLQISAYLPREDIRDVFISHTAQSLKDLALH-----SVIGTSSLRRKALLLR--- 140
L +G + R + + +++ L + + + SL+++
Sbjct: 117 EELPEGATVGTSSLRRKAQ-LLAERDDLTVEPLRGNVDTRLAKLLAPSLQQEHQERHEAE 175
Query: 141 ---------------WRSDISVIDFRGKIETRLNKL-----------NNNKAHAILLAYA 174
+ + +E + L + + AI+LA A
Sbjct: 176 QEHEGDAGDGDDADPDTDEEEEHPYDRTVEEWFDDLTEFERRAMERDPDVEYDAIVLAKA 235
Query: 175 GIKRLKKEK-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
G+ R + V L+ + F P+PGQGA+ + V+ A ++ ++ T E
Sbjct: 236 GLHRAGLTRYVGMSDLDPDQFVPAPGQGALAVTA-VDGDLALDIKDRLDDPQTRIETTVE 294
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
R L EL G C + I A +G ++ VL+ DG V R+ I +D A
Sbjct: 295 RTILEELGGGCVAPIGVHAQLEGGVVHTRVRVLSQDGTEEVSVGRDVPAEYHIESAQDLA 354
Query: 294 QYIRFISNKNVF 305
+ ++
Sbjct: 355 AELAEQGADDLI 366
>gi|29840104|ref|NP_829210.1| porphobilinogen deaminase [Chlamydophila caviae GPIC]
gi|29834452|gb|AAP05088.1| porphobilinogen deaminase HemC, putative [Chlamydophila caviae
GPIC]
Length = 242
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P RI +R S LA A A E L P + I + T GD+ L +
Sbjct: 18 RRPLRIASRRSTLAQAQAHECVCLLRSW--FPKLWVQIHTVHTLGDKDKKTPLHLVENSQ 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++K ++ G AVHSAKD+P I A D D+ + K
Sbjct: 76 FFTDAVDKLVLRGNCHLAVHSAKDLPN--PSKTSIVAITNGLDPSDLLVYGERYLWKRFP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR +L ++D RG IE RL +L + K AI++A A + RL
Sbjct: 134 KNPRLGSSSLRRGEMLKNLFPKGQILDIRGTIEERLKQLESGKYDAIVVAKAAVIRLHLR 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ L P P QG + I N ++L+ +N
Sbjct: 194 LPYTKTLPP---PYHPLQGRLSITAAKNIEAWKKLLLPLN 230
>gi|47779350|gb|AAT38579.1| predicted porphobilinogen deaminase [uncultured gamma
proteobacterium eBACHOT4E07]
Length = 286
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 18/296 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR S LALA E S + II + T+GD +++ T K F
Sbjct: 2 TLKIATRSSKLALAQVDEFVSE------YNISDYKIIKIKTEGDVKSSKGETLF-DKAHF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+I+K ++ G+ D AVHSAKD P K G++ + + R +DV I +
Sbjct: 55 VTDIQKSILRGDADIAVHSAKDTPAKKTNGIERNFIISRTS-KDVLIFKDNNNF---NSS 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSSLRRK + +V D G ++TRL KL I+LA AG++ + +
Sbjct: 111 MKLGTSSLRRKLQAFHFLKSTNVFDINGNVDTRLEKLYRGDYDCIILAKAGLE--RLRLL 168
Query: 185 IKEILNIEDFPPSPGQGAICIETHV---NNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ D+ + GQG + +E N K E+ I ++ + + ER L +D
Sbjct: 169 KELNYEEMDWITASGQGTLAVEMTESYHENEKLLEIHSNIKNKLATNGIEYERNILERVD 228
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C SAIA + + S G + K F S + +I R + +
Sbjct: 229 AGCNSAIAIESISENSKQIIRGEIYGV--KEFITFSGASDIEAIEDIERQNGRRLL 282
>gi|62184962|ref|YP_219747.1| porphobilinogen deaminase [Chlamydophila abortus S26/3]
gi|62148029|emb|CAH63781.1| putative porphobilinogen deaminase [Chlamydophila abortus S26/3]
Length = 249
Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 7/231 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ K+P RI +R S LA A E L P I I +ST+GD+ + +
Sbjct: 16 LGKRPLRIASRKSILAQAQVHECVRLLRSW--FPKLWIQIHTISTRGDKDKTTPIRLVEN 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
FT+ ++K +I G AVHSAKD+P + A D D+ + +
Sbjct: 74 SQFFTDTVDKLVIRGNCHLAVHSAKDLP--DPPATPVVAITKGLDPSDLLVYAERYLWQR 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+G+SS RR L ++D RG IE RL +L N K AI++A A + RL
Sbjct: 132 FPKVPRLGSSSSRRGETLKMLFPTGRILDIRGTIEERLEQLENGKYDAIVVAKAAVLRLH 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
+ ++L P P QG + I + + + +N T
Sbjct: 192 LQLPYTKVLPP---PYHPLQGRLAITAGKDIEAWKTFLLPLNTATTNQETL 239
>gi|295670329|ref|XP_002795712.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01]
gi|226284797|gb|EEH40363.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01]
Length = 216
Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
+L +L SV+GTSS+RR A L R + D RG IETRL KL+ + I+LA A
Sbjct: 2 TLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAA 61
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+ R + I L+ ++ + GQGA+ +E ++ + + +++ I +
Sbjct: 62 GLLRSGQGARISHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLA 121
Query: 233 ERAFLAELDGSCKSAIAGFAYC-------KGSTLYFYGIVLASDGKIFHEVSRNG---NR 282
ER+ L L+G C + + + L IV + DGK E +
Sbjct: 122 ERSLLRALEGGCSAPLGVETEWVKGEGEGEVDKLRLRAIVASVDGKEAVEAEMEAEIRSE 181
Query: 283 CDAINIGRDAAQYIRFISNKNVFNF 307
+A G+ A+ + +
Sbjct: 182 VEAEGFGKTVAEELIVKGAGKILEV 206
>gi|294953467|ref|XP_002787778.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239902802|gb|EER19574.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 74/310 (23%), Positives = 122/310 (39%), Gaps = 46/310 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RIG+R S LA L ++ + + GD L ++
Sbjct: 5 SNATLRIGSRRSDLARLQTLMVADRLEEM----GYEVECEYQEAPGDTNLKDPLWKMPET 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLK 119
G+FT + +KL+ G +D VHS KD+P G ++A LPR D RD+ I ++
Sbjct: 61 GVFTTFLRQKLLEGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIR 120
Query: 120 DLALHSVIGTSSLRRK----ALLLRWRSD---ISVIDFRGKIETRLNKLNN--------- 163
+ ++ +SS RR+ A L R + D RG I+TR+ KL +
Sbjct: 121 AMNGKLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHNASLG 180
Query: 164 NKAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206
+ HA++LA A + R + +L + P + QGA+ +E
Sbjct: 181 PRPHALVLAKAAVDRFAQSHREEFRNSRELVEGYLSKCHCMVLPLSANPTAAAQGALGVE 240
Query: 207 THVNNPK--AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFY 262
+ K +++V +N E T+ + E+ L G C I G +
Sbjct: 241 VSTASEKEHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIGCTVLPRWYGKVEHLR 300
Query: 263 GIVLASDGKI 272
G +DG +
Sbjct: 301 G---RTDGGV 307
>gi|260890848|ref|ZP_05902111.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Leptotrichia hofstadii F0254]
gi|260859401|gb|EEX73901.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Leptotrichia hofstadii F0254]
Length = 193
Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 71/184 (38%), Positives = 97/184 (52%), Gaps = 20/184 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44
M+ IGTR S LALA A + + L+ + K I + +
Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIKKYDELRENESFCEIEGFEKKNSLEIELKVIV 60
Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101
TKGD+ R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + +
Sbjct: 61 TKGDKDL-RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFP 119
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
RED RDV +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL
Sbjct: 120 MREDNRDVLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179
Query: 162 NNNK 165
Sbjct: 180 MMGN 183
>gi|294919063|ref|XP_002778511.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239886970|gb|EER10306.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 74/310 (23%), Positives = 122/310 (39%), Gaps = 46/310 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RIG+R S LA L ++ + + GD L ++
Sbjct: 5 SNATLRIGSRRSDLARLQTLMVADRLEEM----GYKVECEYQEAPGDTNLKDPLWKMPET 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLK 119
G+FT + +KL+ G +D VHS KD+P G ++A LPR D RD+ I ++
Sbjct: 61 GVFTTFLRQKLLDGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIR 120
Query: 120 DLALHSVIGTSSLRRK----ALLLRWRSD---ISVIDFRGKIETRLNKLNN--------- 163
+ ++ +SS RR+ A L R + D RG I+TR+ KL +
Sbjct: 121 AMNGKLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHDASLG 180
Query: 164 NKAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206
+ HA++LA A + R + +L + P + QGA+ +E
Sbjct: 181 PRPHALVLAKAAVDRFAQSHRGEFRNSRELVQGYLSKCHCMVLPLSANPTAAAQGALGVE 240
Query: 207 THVNNPK--AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFY 262
+ K +++V +N E T+ + E+ L G C I G +
Sbjct: 241 VSTASEKGHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIGCTVLPRWYGKVGHLR 300
Query: 263 GIVLASDGKI 272
G +DG +
Sbjct: 301 G---RTDGGV 307
>gi|325526662|gb|EGD04197.1| porphobilinogen deaminase [Burkholderia sp. TJI49]
Length = 141
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMSREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTS 130
+V+GTS
Sbjct: 136 AVVGTS 141
>gi|297180918|gb|ADI17122.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0070_03O15]
Length = 297
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/314 (27%), Positives = 131/314 (41%), Gaps = 33/314 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR S LAL + +S + P II + T+GD+ + K F
Sbjct: 1 MKIATRSSKLALEQTYFFQSWI------PKQPTKIIEIKTEGDKKSAMGEVLF-DKANFV 53
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+IE+ LI D A+HSAKDMP K L + PR D+ I
Sbjct: 54 SDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPR-SRSDLLIFRKDID-PVFKKDM 111
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG +RLK +
Sbjct: 112 KLGTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAGCQRLKIDFED 171
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELV---------KVINHEDTWDSVNCERAF 236
+ + GQG + ++ +N A+E + +VI+ E E+
Sbjct: 172 LNYIELGH-LTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIHDE-----TEMEKRL 225
Query: 237 LAELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
L ++ SC SAIA A +G + G V + +S G D DA
Sbjct: 226 LEKIGASCNSAIAVRANHEGPKGVDKI-IKGEVYGLN----EYISFEGKSSDVDTAINDA 280
Query: 293 AQYIRFISNKNVFN 306
++ + + N
Sbjct: 281 IDMLQNKNGLELLN 294
>gi|212550635|ref|YP_002308952.1| hydroxymethylbilane synthase/uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548873|dbj|BAG83541.1| hydroxymethylbilane synthase/uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 682
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 20/227 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+ +R SPL+L E P + +I + + GD+ + L +I
Sbjct: 7 SKGNLRVISRNSPLSLLQVKEV------FSFFPNIDYQLITIESFGDKNKHVALFDISNV 60
Query: 62 G-----------LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
FT E+++ LI + D AVHSAKD+P L L++ A D D
Sbjct: 61 SSFFLEEESISDFFTRELDEALIYNKADIAVHSAKDLPYPLPYDLELFALFQAMDKSDSL 120
Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
IS +L+ L + +GTSS +RK LL+ R D+ V+ RG IE R+ K++N A++
Sbjct: 121 ISRNNLTLEQLPPRARVGTSSQKRKTELLKIRPDLEVVSIRGNIEERIAKMDNGFIDALI 180
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+A + RL E I IL E QG + I N+ + L
Sbjct: 181 VATCALIRLGMEARIACILPFET---HSLQGNLAIVGRKNDKNVKNL 224
>gi|297170589|gb|ADI21615.1| porphobilinogen deaminase [uncultured myxobacterium HF0130_06F04]
Length = 197
Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 8/198 (4%)
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
L L + +GTSSLRRKA LL R D+ ++D RG + TR NK + + A++LA
Sbjct: 2 DDNQLWGLKEKARVGTSSLRRKAHLLSKRPDLVMVDIRGNVPTRFNKAVSGELDAVILAE 61
Query: 174 AGIKRLKK------EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
AG+ RL+ + V +++ P+P QGA+ I+T ++ +A +K ++H T
Sbjct: 62 AGLTRLEMGKQAENQGVRLVPIDVASVCPAPAQGALAIQTRSDDERAHAALKALHHPGTA 121
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
V ER L E G C + + +V + DG E GN
Sbjct: 122 ACVEVERLLLGEFGGGCHLPLGAHCTVENGEYTLVALVASPDGGERFEARSTGN--HPNE 179
Query: 288 IGRDAAQYIRFISNKNVF 305
+ + +
Sbjct: 180 VAKQVHLELVRQGADAYL 197
>gi|15835189|ref|NP_296948.1| porphobilinogen deaminase [Chlamydia muridarum Nigg]
gi|270285361|ref|ZP_06194755.1| porphobilinogen deaminase [Chlamydia muridarum Nigg]
gi|270289377|ref|ZP_06195679.1| porphobilinogen deaminase [Chlamydia muridarum Weiss]
gi|301336758|ref|ZP_07224960.1| porphobilinogen deaminase [Chlamydia muridarum MopnTet14]
gi|11386847|sp|Q9PK95|HEM3_CHLMU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|7190611|gb|AAF39408.1| porphobilinogen deaminase HemC, putative [Chlamydia muridarum Nigg]
Length = 242
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
+ K P R+ +R SPLA+ A E L P +I +T+GD + L +
Sbjct: 16 LGKIPLRLASRKSPLAVLQAHECLRRLQTF--FPRLWGQVITETTQGDLDQHTPLHSVEN 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G FT++I+ + SG+ D A+HSAKD+P K ++ A D RD+ + L+
Sbjct: 74 TGFFTDDIDFLVQSGKCDLAIHSAKDLPEK--PKARVIAITASIDPRDILVFQEKYLLQP 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
IG SS RR+AL+ + D RG I+TRL L+ K AI++A A + RL
Sbjct: 132 FPSRLRIGCSSDRRRALISSLYPSAVITDIRGTIQTRLALLDQQKFDAIVMANAAVSRLG 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
+L + P G+ AI H+ + + L I
Sbjct: 192 LRLPCTVVLPPP-YHPFQGRLAITSCHHIASWEKLFLTCKI 231
>gi|297181506|gb|ADI17693.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0130_23I23]
Length = 297
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 85/314 (27%), Positives = 131/314 (41%), Gaps = 33/314 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR S LAL + +S + P II + T+GD+ + K F
Sbjct: 1 MKIATRSSKLALEQTYFFQSWI------PKQPTKIIEIKTEGDKKSAMGEVLF-DKANFV 53
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+IE+ LI D A+HSAKDMP K L + PR D+ I
Sbjct: 54 SDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPR-SRSDLLIFRKDID-PVFKKDM 111
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG +RLK +
Sbjct: 112 KLGTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAGCQRLKIDFED 171
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELV---------KVINHEDTWDSVNCERAF 236
+ + GQG + ++ +N A+E + +VI+ E E+
Sbjct: 172 LNYIELGH-LTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIHDE-----TEMEKRL 225
Query: 237 LAELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
L ++ SC SAIA A +G + G + + +S G D DA
Sbjct: 226 LEKIGASCNSAIAVRANHEGPKGVDKI-IKGEIYGLN----EYISFEGKSSDVDTAINDA 280
Query: 293 AQYIRFISNKNVFN 306
++ + + N
Sbjct: 281 IDMLQNKNGLELLN 294
>gi|46445906|ref|YP_007271.1| porphobilinogen deaminase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399547|emb|CAF22996.1| putative Porphobilinogen deaminase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 233
Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G R SPL+ A E +L + P I T GD +L ++ FT
Sbjct: 18 ISVGARSSPLSRAQVQEILKALRSFY--PSIEFTISYFDTIGDLDQKTSLRDLDKTNFFT 75
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ ++ + +HSAKD+P + GLQ+ D DV + ++L+ L HS
Sbjct: 76 KEIDEAILQKKCQIGIHSAKDLPDPIPDGLQLICLTKGVDCSDVLVLRDGETLQTLPPHS 135
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSS+RR+ ++ R+D +D RG I RL L +A +++A A + RL +
Sbjct: 136 RIATSSIRRENIVKLLRNDFIFLDLRGTIHQRLALLEKKQADGVVVAEAALIRLGLTHLN 195
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ L GQG + I ++ K Q L ++
Sbjct: 196 RIRLPGTTV---EGQGQLAIIARKDDAKMQTLFACLD 229
>gi|62999515|gb|AAY25186.1| putative porphobilinogen deaminase [Streptomyces nodosus subsp.
asukaensis]
Length = 167
Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats.
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 8/159 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP R+GTR S LA+A + ++ +V + ++ ++T GD I+ L +IGG G+
Sbjct: 13 KPLRLGTRRSKLAMAQSGMVADAVSEVT---GRAVELVEVTTYGD-ISREHLAQIGGTGV 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ + + L
Sbjct: 69 FVAALRDALLRGEVDFAVHSLKDLPTAQPEGLVLAAVPVREDPRDVLVARDGLTFEQLPS 128
Query: 124 HSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRL 158
+ IGT S RR A L DI + RG ++TR+
Sbjct: 129 GARIGTGSPRRMAQLNAYARNHGLDIETVPIRGNVDTRI 167
>gi|45644676|gb|AAS73064.1| predicted porphobilinogen deaminase [uncultured marine gamma
proteobacterium EBAC20E09]
Length = 291
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 17/248 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I +R S LALA E V K + II + T+GD I + + K F
Sbjct: 2 TIKIASRSSKLALAQVEEF------VKKFGISDYKIIKVKTEGD-IKSANGETLFDKAHF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+++K L++GE D AVHSAKD P GL +LP + +DV I
Sbjct: 55 VSDVQKCLLNGEADIAVHSAKDTPAGETTGLLRY-FLPSQSNQDVLIFREEDKF---NSE 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSSLRR+ + I++++ G ++TRL KL+ + I+LA AG+ RLK
Sbjct: 111 MKLGTSSLRRQLQAKHHLNAINIVNLSGNVDTRLEKLSQGEYDCIILAKAGLARLKLLNE 170
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN-NPKAQE-LVKVIN--HEDTWDSVNCERAFLAEL 240
+ + D+ + GQG +CIE + + L+K I + +++ ER+ L +
Sbjct: 171 L--QYEVMDWSTASGQGFLCIEVLNDPSADIYNFLLKSIREIDLNLGKNISTERSILEAI 228
Query: 241 DGSCKSAI 248
+ C SAI
Sbjct: 229 NAGCNSAI 236
>gi|15791132|ref|NP_280956.1| porphobilinogen deaminase [Halobacterium sp. NRC-1]
gi|169236887|ref|YP_001690087.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Halobacterium salinarum R1]
gi|25453030|sp|Q9HMY5|HEM3_HALSA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|10581740|gb|AAG20436.1| porphobilinogen deaminase [Halobacterium sp. NRC-1]
gi|167727953|emb|CAP14741.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Halobacterium salinarum R1]
Length = 396
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+ TR S LAL A E +L D H++ ++ + T+GDR+T+ ++++G
Sbjct: 1 MSSQQIRLATRGSDLALRQAGEVVDTLEDRR----HDVELVEVETEGDRVTDALISDLGK 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F ++++++ G +D AVHS KD+PT++ + L ++A RE+ DV ++ L+D
Sbjct: 57 TGAFVRALDQEVMEGTVDAAVHSMKDVPTEVPEDLVVAAVPHRENPADVLVTPDGTDLED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
L SV+GT+SLRR A + R + V RG + TR+ KL
Sbjct: 117 LPAGSVVGTASLRRGAQVQAHRPGLDVEPIRGNVGTRVEKL 157
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 1/153 (0%)
Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
++ + + + + A+++A G++R V E L+ P+ GQGA+C+ ++
Sbjct: 238 QSAMERDPDTEYDALVMARVGLERTGLLHHVGIEELSTGTHVPATGQGALCVTARRDSDV 297
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L + H T V ER L EL G C + I A +G T+ V + DG
Sbjct: 298 VDTLRDALEHVRTRVEVTAERVVLEELGGGCIAPIGVHALVQGDTIRTAVQVFSQDGSEQ 357
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+R + R+ A +R ++
Sbjct: 358 VGETRELDAEQYATDARELAADLRDRGAADLIE 390
>gi|218677853|ref|ZP_03525750.1| porphobilinogen deaminase [Rhizobium etli CIAT 894]
Length = 123
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/122 (64%), Positives = 92/122 (75%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLTTKGDRITDRSLSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D
Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMPTNLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120
Query: 121 LA 122
L
Sbjct: 121 LP 122
>gi|317471679|ref|ZP_07931020.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA]
gi|316900783|gb|EFV22756.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA]
Length = 139
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME K RIG+R S LA+A L + P + ++ L T GD+I N+TL +IGG
Sbjct: 1 MEPKRLRIGSRESLLAVAQTRLVIEQLKANY--PELSFELVTLKTTGDKILNKTLDKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ ++
Sbjct: 59 KGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRS 143
VIG+SS RR R
Sbjct: 119 F--GQVIGSSSARRVLQARRLFP 139
>gi|154762311|gb|ABS86004.1| porphobilinogen deaminase [Cervus elaphus]
gi|155494266|gb|ABS86002.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494267|gb|ABS86003.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494268|gb|ABS86005.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494269|gb|ABS86006.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494270|gb|ABS86007.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494271|gb|ABS86008.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494272|gb|ABS86009.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494273|gb|ABS86010.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494274|gb|ABS86011.2| porphobilinogen deaminase [Cervus elaphus canadensis]
Length = 195
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E
Sbjct: 1 RGNLNTRLQKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
+ +LV V++ +T ER+FL L+G C +A K LY G V + +
Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTTIKDGQLYLTGGVWSLN 120
Query: 270 GKIFHEVSR-----------NGNRCD------------------AINIGRDAAQYIRFIS 300
G + + +G D A N+G A +
Sbjct: 121 GAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITARNIPRQPQLAAENLGISLATLLLNKG 180
Query: 301 NKNVFNF 307
KN+ +
Sbjct: 181 AKNILDV 187
>gi|269302924|gb|ACZ33024.1| porphobilinogen deaminase [Chlamydophila pneumoniae LPCoLN]
Length = 234
Score = 168 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+P RI +R S LA A E S L + P + T GDR L +
Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDRDKKIPLHLVENSY 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++ + G D A+HSAKD+P L + A D+ + + L
Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDLP--ETPSLPVVAITRCLHPADLLVYADHYVHEPLP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL
Sbjct: 134 LRPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLHLH 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
L P QG++ I + K ++L I+ +
Sbjct: 194 HAYSIELPP---PYHALQGSLAITAKDHAGKWKQLFTPIHCHSS 234
>gi|323451311|gb|EGB07188.1| hypothetical protein AURANDRAFT_59094 [Aureococcus anophagefferens]
Length = 331
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 28/320 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT-EIGGKGLF 64
+I TR SPLA+ A +L P ++ +S+ G+ N L + F
Sbjct: 18 VKIATRPSPLAVKQAERVAETLRRA--DPALTTELVRISSTGEYRNNTPLPLALDPTVDF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPR-EDIRDVFISHTAQSLKDL 121
T ++ + SG +D AVHS KD+P L+++ +LPR E D + S+ +
Sbjct: 76 TGLLDDAVGSGAVDVAVHSLKDLPPANRWRGDLRVACHLPRTESAADALVG--YASMDLV 133
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180
+ +GT+S RR+ALL R D+ V+ RG + RL L+ A++L AG++RL+
Sbjct: 134 PRGARVGTASQRRRALLRCARPDLDVVTVRGNVHARLETLDRGDVDALILGAAGLQRLEL 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL--- 237
+ IL+ ++ P+P QG + + +L+ + D + ERA L
Sbjct: 194 LDARRHAILSFDEMLPAPAQGIVGAVARGDGGALGDLLARADDRDARIAATAERAVLDVA 253
Query: 238 --AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG------ 289
A + + G+ + DG + + +A +G
Sbjct: 254 DAASPGAG-RPPTSAAMTRDGAAWLLRARLTRPDGS---RSAATTSTVEADQLGDGDAAA 309
Query: 290 ----RDAAQYIRFISNKNVF 305
A + + + + F
Sbjct: 310 REFGAAAGRDLLRRAGPDFF 329
>gi|15617976|ref|NP_224260.1| porphobilinogen deaminase [Chlamydophila pneumoniae CWL029]
gi|15835588|ref|NP_300112.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138]
gi|16752992|ref|NP_445265.1| porphobilinogen deaminase [Chlamydophila pneumoniae AR39]
gi|33241388|ref|NP_876329.1| porphobilinogen deaminase [Chlamydophila pneumoniae TW-183]
gi|11386861|sp|Q9Z9C9|HEM3_CHLPN RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|4376307|gb|AAD18205.1| Porphobilinogen Deaminase [Chlamydophila pneumoniae CWL029]
gi|7189637|gb|AAF38528.1| porphobilinogen deaminase HemC, putative [Chlamydophila pneumoniae
AR39]
gi|8978426|dbj|BAA98263.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138]
gi|33235896|gb|AAP97986.1| hydroxymethylbilane synthase [Chlamydophila pneumoniae TW-183]
Length = 234
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+P RI +R S LA A E S L + P + T GDR L +
Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDREKKIPLHLVENSY 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++ + G D A+HSAKD+P L + A D+ + + L
Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDLP--ETPSLPVVAITRCLHPADLLVYADHYVHEPLP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL
Sbjct: 134 LSPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLHLH 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
L P QG++ I + K ++L I+ +
Sbjct: 194 HAYSIELPP---PYHALQGSLAITAKDHAGKWKQLFTPIHCHSS 234
>gi|154762327|gb|ABS86012.1| porphobilinogen deaminase [Capra hircus]
gi|154762329|gb|ABS86013.1| porphobilinogen deaminase [Capra hircus]
Length = 195
Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E
Sbjct: 1 RGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
+ +LV V++ +T ER+FL L+G C +A K LY G V + +
Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLN 120
Query: 270 GKIFHEVSR-----------NGNRCD------------------AINIGRDAAQYIRFIS 300
G + + +G D A N+G A +
Sbjct: 121 GAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITARNIPRQPQLAAENLGISLATLLLNKG 180
Query: 301 NKNVFNF 307
KN+ +
Sbjct: 181 AKNILDV 187
>gi|282892112|ref|ZP_06300587.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498007|gb|EFB40351.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 221
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
R SPL+ A E + +L H P ++ + ++T GD+ +L + FT+E+
Sbjct: 2 AARESPLSKAQVLEVQQALHPHH--PMIELIPVWVATTGDKQQEISLRNMEKTDFFTKEL 59
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+SG+ D AVHSAKD+P L +GL + A D RDV + SL L ++I
Sbjct: 60 DALLLSGQCDVAVHSAKDLPDPLPQGLSLIALTEGVDNRDVLVIREGLSLAALPQAAMIA 119
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSS RR+ R+D +D RG I RL+ L A I++A A + RL + +
Sbjct: 120 TSSERREQQARMLRTDFRFMDLRGTIGQRLSLLEAGVADGIIVAEAALIRLGLCHLNRVY 179
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
L E +P QG + I + + +E+ + ++
Sbjct: 180 LPGET---APMQGRLAILAKTEHVEMREIFACL-DAESGLC 216
>gi|15605020|ref|NP_219804.1| porphobilinogen deaminase [Chlamydia trachomatis D/UW-3/CX]
gi|76789021|ref|YP_328107.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13]
gi|255311101|ref|ZP_05353671.1| porphobilinogen deaminase [Chlamydia trachomatis 6276]
gi|255317402|ref|ZP_05358648.1| porphobilinogen deaminase [Chlamydia trachomatis 6276s]
gi|255506878|ref|ZP_05382517.1| porphobilinogen deaminase [Chlamydia trachomatis D(s)2923]
gi|301335770|ref|ZP_07224014.1| porphobilinogen deaminase [Chlamydia trachomatis L2tet1]
gi|11386778|sp|O84301|HEM3_CHLTR RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|3328714|gb|AAC67892.1| Porphobilinogen Deaminase [Chlamydia trachomatis D/UW-3/CX]
gi|76167551|gb|AAX50559.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13]
gi|296435816|gb|ADH17990.1| porphobilinogen deaminase [Chlamydia trachomatis G/9768]
gi|296436741|gb|ADH18911.1| porphobilinogen deaminase [Chlamydia trachomatis G/11222]
gi|296437676|gb|ADH19837.1| porphobilinogen deaminase [Chlamydia trachomatis G/11074]
gi|297140175|gb|ADH96933.1| porphobilinogen deaminase [Chlamydia trachomatis G/9301]
gi|297748428|gb|ADI50974.1| Porphobilinogen deaminase [Chlamydia trachomatis D-EC]
gi|297749308|gb|ADI51986.1| Porphobilinogen deaminase [Chlamydia trachomatis D-LC]
Length = 241
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+ +R S LA+ A E L P II +T+GD L + G F
Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T++++ + SG+ D +HSAKD+P + + D RD+ + H L
Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDLPEN--PKATVVSITASIDPRDILVFHEKYLSIPLPRR 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG+SS+RRK LL + D RG I+TRL L AI++A A + RL
Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+IL + P G+ AI H+ + + L
Sbjct: 196 CTKILPPP-YHPLQGRLAITASRHIRSWRGLFL 227
>gi|255348660|ref|ZP_05380667.1| porphobilinogen deaminase [Chlamydia trachomatis 70]
gi|255503200|ref|ZP_05381590.1| porphobilinogen deaminase [Chlamydia trachomatis 70s]
gi|296434889|gb|ADH17067.1| porphobilinogen deaminase [Chlamydia trachomatis E/150]
gi|296438609|gb|ADH20762.1| porphobilinogen deaminase [Chlamydia trachomatis E/11023]
Length = 241
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+ +R S LA+ A E L P II +T+GD L + G F
Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T++++ + SG+ D +HSAKD+P + + D RD+ + H L
Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDLPEN--PKATVISITASIDPRDILVFHEKYLSIPLPRR 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG+SS+RRK LL + D RG I+TRL L AI++A A + RL
Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+IL + P G+ AI H+ + + L
Sbjct: 196 CTKILPPP-YHPLQGRLAITASRHIRSWRGLFL 227
>gi|293194091|ref|ZP_06609931.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces odontolyticus F0309]
gi|292819785|gb|EFF78795.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces odontolyticus F0309]
Length = 177
Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEI 58
M + F +GTR S LALA + ++ + + + + T GD ++ L +
Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRVNLEVVRTHGD-VSAEPLAAL 59
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + +L
Sbjct: 60 GGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAADGATL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
L +++GT S RR A +L R D+ V D RG + TRL+++ A
Sbjct: 120 ASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGA 169
>gi|149041455|gb|EDL95296.1| hydroxymethylbilane synthase, isoform CRA_b [Rattus norvegicus]
Length = 192
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 3 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 61 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 120
Query: 121 LALHS 125
L S
Sbjct: 121 LPEKS 125
>gi|149041456|gb|EDL95297.1| hydroxymethylbilane synthase, isoform CRA_c [Rattus norvegicus]
Length = 208
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K L
Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136
Query: 121 LALHS 125
L S
Sbjct: 137 LPEKS 141
>gi|260829671|ref|XP_002609785.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae]
gi|229295147|gb|EEN65795.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae]
Length = 140
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ +SL + + II +ST GD+I + L++IG K LFT+E+EK L G
Sbjct: 1 MIQTNSVVASLKKL--CDDVDFEIISMSTTGDKILDTALSKIGEKSLFTKELEKALDDGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLR 133
+D VHS KD+ + L + I A L RED D + H + L DL +SVIGTSS+R
Sbjct: 59 VDFVVHSLKDLQSTLPPNMVIGAVLEREDPYDAVLMHPKHATKCLADLPENSVIGTSSVR 118
Query: 134 RKALLLRWRSDISVIDF 150
R A L R +
Sbjct: 119 RVAQLKRKYPHLKFESV 135
>gi|323338379|gb|EGA79604.1| Hem3p [Saccharomyces cerevisiae Vin13]
Length = 152
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176
++GTSS+RR A L R + RG I+TRL KL++ K I+LA AG+
Sbjct: 1 MTFQTGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGL 60
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ E I + + + + GQGA+ IE + K +++ I + ERA
Sbjct: 61 MRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERAL 120
Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYG 263
+ L+G C I + T + G
Sbjct: 121 MRTLEGGCSVPIGVESKYNEETKKITIKG 149
>gi|222480661|ref|YP_002566898.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239]
gi|222453563|gb|ACM57828.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239]
Length = 385
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S LAL A R +L + ++ + + T+GD+I + + +G G F
Sbjct: 4 TLRLATRGSDLALRQAGTVRDALSSRRR----DVELRRVETRGDQIPDEMIHRLGKTGAF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++++++ G+ D AVHS KD+PT+ + + I+ R DV + ++DL
Sbjct: 60 VRALDEEVLGGDADLAVHSLKDVPTEGMDDMVIAGVPERAPSGDVLVHPDGLGIEDLPSG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
SV+GT SLRR A + R D+ V RG ++TR+ KL A
Sbjct: 120 SVVGTGSLRRTAQIKAARPDLVVEPLRGNVDTRVEKLLAPDLQA 163
Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKA 214
+ + + + AI+LA AG++R + +V L E+F P+ GQGAI + +
Sbjct: 219 SAMERKVETEYDAIVLAEAGLRRSELFYEVPTTRLPREEFVPAAGQGAIAVTA-TDPDVI 277
Query: 215 QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274
+++ ++H T +V ER L EL+G C + I A +G ++ VL++DG
Sbjct: 278 EDVRSAVDHPRTRVAVTVERTILGELNGGCVAPIGVSALVQGEHVHTRVRVLSTDGTEEV 337
Query: 275 EVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+R+ + A + +
Sbjct: 338 ADTRDLPIRSHAKAAEEFAADLADRGAAELIE 369
>gi|307254894|ref|ZP_07536716.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306862135|gb|EFM94107.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
Length = 119
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG
Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106
LF +E+E L+ D AVHS KD+P +GL ++ RED
Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDP 108
>gi|166154510|ref|YP_001654628.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu]
gi|166155385|ref|YP_001653640.1| porphobilinogen deaminase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237802722|ref|YP_002887916.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT]
gi|237804644|ref|YP_002888798.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT]
gi|165930498|emb|CAP03991.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu]
gi|165931373|emb|CAP06945.1| porphobilinogen deaminase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231272944|emb|CAX09855.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273956|emb|CAX10748.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT]
Length = 219
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
+R S LA+ A E L P II +T+GD L + G FT+++
Sbjct: 2 ASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFFTDDV 59
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ + SG+ D +HSAKD+P + + D RD+ + H L IG
Sbjct: 60 DFLVQSGQCDLGIHSAKDLPEN--PKATVVSITASIDPRDILVFHEKYLSIPLPRRLRIG 117
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
+SS+RRK LL + D RG I+TRL L AI++A A + RL +I
Sbjct: 118 SSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLPCTKI 177
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQEL 217
L + P G+ AI H+ + + L
Sbjct: 178 LPPP-YHPLQGRLAITASRHIRSWRGLFL 205
>gi|289525338|emb|CBJ14814.1| porphobilinogen deaminase [Chlamydia trachomatis Sweden2]
Length = 219
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
+R S LA+ A E L P II +T+GD L + G FT+++
Sbjct: 2 ASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFFTDDV 59
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ + SG+ D +HSAKD+P + + D RD+ + H L IG
Sbjct: 60 DFLVQSGQCDLGIHSAKDLPEN--PKATVISITASIDPRDILVFHEKYLSIPLPRRLRIG 117
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
+SS+RRK LL + D RG I+TRL L AI++A A + RL +I
Sbjct: 118 SSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLPCTKI 177
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQEL 217
L + P G+ AI H+ + + L
Sbjct: 178 LPPP-YHPLQGRLAITASRHIRSWRGLFL 205
>gi|262277145|ref|ZP_06054938.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane
synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha
proteobacterium HIMB114]
gi|262224248|gb|EEY74707.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane
synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha
proteobacterium HIMB114]
Length = 492
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 86/293 (29%), Positives = 122/293 (41%), Gaps = 31/293 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LA F + L K STKGD+ + G G+FT
Sbjct: 5 LIIGSRASFLAKIQTFIVKQELKKKIKNIKITTKYH--STKGDKNQGHMPWKNLGYGIFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ +LI+ +C VHS KD+P LK + R+D RDV + K
Sbjct: 63 TSLTNELINKNFNCVVHSYKDLPV--LKSKTDYYVITRDDPRDVLLVKKKCLNK---KKF 117
Query: 126 VIGTSSLRRKALLLRWR-----SDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR- 178
++GTSS RRK+ + + DI RG + TRL K+ + N+ A+ +A A I R
Sbjct: 118 IVGTSSPRRKSSVKDLKDLTGIKDIKTKTIRGNVTTRLLKVISKNQYDAVFMAKAAIDRI 177
Query: 179 ---------------LKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
L +K IL + FP + QGAI +E N+ K + + IN
Sbjct: 178 FKYGNKVDKVETKKFLNLFKKFKPFILPLSIFPTAASQGAIAVEYLKNDKKTKSTLNKIN 237
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFH 274
+ T N ER+ L + G C I K + F V A + K FH
Sbjct: 238 CKKTLSICNQERSLLKKYGGGCGLDIGITIEEIKNNNFLFSKGVDARNKKEFH 290
>gi|110669321|ref|YP_659132.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Haloquadratum walsbyi DSM 16790]
gi|109627068|emb|CAJ53547.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Haloquadratum walsbyi DSM 16790]
Length = 394
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + TR S LAL A + +L D + + +I + T+GD+I + + ++G
Sbjct: 7 TRGTLTLATRGSDLALKQATSVQEALTDER----YEVDLIEVETRGDQIQDELIHQLGKT 62
Query: 62 GLFTEEIEKKLIS--GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G F ++KK++ E D AVHS KDMPT L ++ R D+ I+ Q L
Sbjct: 63 GAFVRALDKKVLDPTAEADAAVHSMKDMPTDSPDDLVVAGIPQRAPPGDLLITTDGQRLS 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
DL + IGTSSLRR+A LL R+DI+V RG I+TR+ KL
Sbjct: 123 DLPSGATIGTSSLRRQAQLLDQRTDITVEPLRGNIDTRIEKL 164
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 1/149 (0%)
Query: 158 LNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216
L + + AI+LA AG++R + L+ F P+PGQGAI I T +
Sbjct: 228 LERSVETEYDAIVLAEAGLQRSGLIHHIEYVQLDTTTFVPAPGQGAIAITTQGEANATAQ 287
Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276
+ + I+H T ER LAEL G C + I A +G ++ V ASDG +
Sbjct: 288 IREAIDHPRTRVETTVERTVLAELGGGCIAPIGVHATLQGEYVHVAAQVFASDGTETVDG 347
Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVF 305
SRN + A + +
Sbjct: 348 SRNLPVDAHADAAAQFANKLADRGADELI 376
>gi|315186776|gb|EFU20534.1| uroporphyrin-III C-methyltransferase [Spirochaeta thermophila DSM
6578]
Length = 661
Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 15 LALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73
LALA E + D + L +GDR L + G FT+ +++ L+
Sbjct: 2 LALAQVREWIARWRDASPEAGEVKWEPVVLHPRGDRDKRTPLHLVEGSDFFTDALDEALL 61
Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHT----AQSLKDLALHSVIG 128
G ID A+HSAKD+P L +GL ++A P E R DV + H A S+++L IG
Sbjct: 62 VGRIDVALHSAKDLPDDLREGLSLAAITPLEGPREDVLVLHPRWASASSVEELPAGLRIG 121
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSS RR+ L RSD ++D RG IE RL ++++ + +++A + ++
Sbjct: 122 TSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAALALT----RLALEVP 177
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
F P P QG + + +A L V++ W V
Sbjct: 178 HLPLPFVPHPLQGRLAAVVREGDEEAHRLCDVLDDRGRWGRVAI 221
>gi|294885317|ref|XP_002771270.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239874766|gb|EER03086.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 556
Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 68/301 (22%), Positives = 113/301 (37%), Gaps = 42/301 (13%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E IG+R S LA L D + + GD L ++
Sbjct: 6 EPSVLHIGSRRSDLARLQTLMIADLLQDEMGV---KVECHYREAPGDTNLKDPLWKMPET 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT + L++G D VHS KD+P G + A LPR D RD+ + +
Sbjct: 63 GVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTTVVATLPRADPRDLLLIRRDAIEEMT 122
Query: 122 ALHS--VIGTSSLRRKALLLRWR-------SDISVIDFRGKIETRLNKLNNN-------- 164
+ ++ +SS RR+ L + + + D RG I+TR+ KL +
Sbjct: 123 SEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQFRDVRGNIQTRMKKLMDPTIHDESLG 182
Query: 165 -KAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206
+ H +++A A + R + +L + P + QGA+ IE
Sbjct: 183 CRPHGLVVAKAAVDRFIRSTREEFKESRQLVQGYISECRCMVLPLSANPTAAAQGALGIE 242
Query: 207 THV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFY 262
+++V+ +N T+D+ + E+ L G C I G L+
Sbjct: 243 VSTAPEKEHVRKIVRSLNDRSTFDAASKEKELLNSYGGGCHQKIGCTILPRQYGDVLFLC 302
Query: 263 G 263
G
Sbjct: 303 G 303
>gi|300726136|ref|ZP_07059593.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Prevotella bryantii B14]
gi|299776606|gb|EFI73159.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Prevotella bryantii B14]
Length = 226
Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/207 (30%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE-IGGKGL 63
P R+ R S L+ E + L I+ T GD+ + +L +
Sbjct: 9 PIRVIARRSKLSQLQVAEVFNRLK------DIPYTIVFTDTFGDKRLDLSLLNGEAPDDM 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L+ + D A+HSAKD+P L L++ A D D +S L DL
Sbjct: 63 FTRELDWALLHDDADIAIHSAKDLPEHLHPDLEVIALYEAFDKTDALVSRDHIKLMDLPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S +GTSS RK L R D+ ++ RG IE R+ ++ + K ++A +KRL E
Sbjct: 123 GSTVGTSSPLRKKGLSELRPDLKIVGIRGCIEDRVAQVRDGKLDCAIVATCALKRLGMED 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN 210
I EIL FP P QG + I
Sbjct: 183 EITEILP---FPTHPMQGRLAITAKRG 206
>gi|218513448|ref|ZP_03510288.1| porphobilinogen deaminase [Rhizobium etli 8C-3]
Length = 137
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/137 (45%), Positives = 94/137 (68%)
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
TRL KL + A LLA AG+KRL K +V+ +IL+ + FPP+P QGAICIE+ + + +
Sbjct: 1 TRLRKLEEGQVDATLLALAGLKRLGKVEVLTDILDPDTFPPAPAQGAICIESRIGDSRID 60
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
+L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G + F G+++ DG+ H
Sbjct: 61 DLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHA 120
Query: 276 VSRNGNRCDAINIGRDA 292
V+ +G+R DA +G A
Sbjct: 121 VTTDGHRRDAAALGTRA 137
>gi|3172401|gb|AAC18584.1| porphobilinogen deaminase [Lysinibacillus sphaericus]
Length = 109
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L P + + TKGD+I + L+++GGKGL
Sbjct: 3 RKIIVGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
F +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS
Sbjct: 61 FVKEIEQALFDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFIS 109
>gi|330444348|ref|YP_004377334.1| Porphobilinogen deaminase, dipyromethane cofactor binding
domain-containing protein [Chlamydophila pecorum E58]
gi|328807458|gb|AEB41631.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila pecorum E58]
Length = 237
Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +I +R S LA A E L + P ++I T+GDR L I F
Sbjct: 19 PLKIASRDSNLAKAQVNECLQLLRTSY--PKLQSLLITTKTQGDRDKLTPLHTIENSDFF 76
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T +++ + G A+HSAKD+PT L + A D+ + + + +
Sbjct: 77 TRDVDALVCQGSCHIAIHSAKDLPT--PSPLPLVALTRCLHPADLLVYADHYTKEPFPSN 134
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+G+SS+RR +L + +++ RG IE RL +L+NN A++LA A RL +
Sbjct: 135 PRLGSSSMRRGEVLKQLFPLGQILNIRGTIEERLQQLHNNTYDAVVLAKAAALRLGLSFL 194
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
E+L P P QG + + + + + + I+ + S+
Sbjct: 195 YSELLPP---PYHPLQGRLALTAYESIDLWRTFLSPIHDTNLRYSI 237
>gi|266622116|ref|ZP_06115051.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Clostridium hathewayi DSM 13479]
gi|288866179|gb|EFC98477.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Clostridium hathewayi DSM 13479]
Length = 107
Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 53/108 (49%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LA+ +L V P I+ T+GDRI N+ L E GGKG
Sbjct: 2 NKTIRIGTRKSALAMVQTELVAEALKQVQ--PGLETRIVTKVTEGDRILNKPLLEFGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
+F E E+ L +GEID AVHSAKD+P L GL I A PRED RDV
Sbjct: 60 VFVTEFEQALQNGEIDFAVHSAKDLPMDLEDGLGIVAVPPREDPRDVL 107
>gi|260890849|ref|ZP_05902112.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254]
gi|260859402|gb|EEX73902.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254]
Length = 135
Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K L+K+IN ++
Sbjct: 1 MLAAAGLKRVGLENRITEYFDTDSFMPAPGQGILCIQCRENDNKILNLLKIINDDEVTIM 60
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ER F DG C + I + +G+TL G+ +G + GNR +
Sbjct: 61 CKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGM-FNDNGTRIFK-EVEGNRENPKETA 118
Query: 290 RDAAQYIRFISNKN 303
+ A+ I+ KN
Sbjct: 119 QKLAEEIKEEEMKN 132
>gi|327493887|gb|AEA86530.1| porphobilinogen deaminase [Euglena gracilis]
Length = 210
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 12/179 (6%)
Query: 140 RWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGIKRLKKEKVIKEILNIED---F 194
+ D RG ++TRL KL + A++LA +G++RL + E+L D F
Sbjct: 1 HQFPHLLFKDVRGNVQTRLAKLEDPTHGYAALVLAVSGLERLALGHHVTEVLASTDRRWF 60
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
+ GQGA+ ++ + ++ ++H++T ERA + EL+G C + IA
Sbjct: 61 GYAVGQGALTVQCREGDAGTLRYLQHLHHQETAQRCIAERALMRELEGGCHAPIAVETRT 120
Query: 255 ------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR-FISNKNVFN 306
L + + DG+ + +A +GR A+ IR + +
Sbjct: 121 FTEPGQPEPQLCLTAALYSLDGRQCVQRRLCQPAVEAEALGRAVAKAIREADGAAAILD 179
>gi|62319114|dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 130
Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL L
Sbjct: 1 MTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETL 60
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIR 297
DGSC++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 61 DGSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELL 120
Query: 298 FISNKNVFN 306
+ F
Sbjct: 121 SRAGPGFFG 129
>gi|297521378|ref|ZP_06939764.1| porphobilinogen deaminase [Escherichia coli OP50]
Length = 92
Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94
KGLF +E+E L+ D AVHS KD+P + +G
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQG 92
>gi|225020272|ref|ZP_03709464.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii
ATCC 33806]
gi|224947016|gb|EEG28225.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii
ATCC 33806]
Length = 152
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+ K+++ + A++LAYAG+ R+ + E+ + +F P+P QGA+ +E ++
Sbjct: 1 MAKVHDGELDAVVLAYAGLSRVHRADEATEVFDPLEFLPAPAQGALAVECRADDADTIAA 60
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL-YFYGIVLASDGKIFHEV 276
+ I + + ER LA L+ C + +A +A + + V+A DG
Sbjct: 61 ITTIADSKAYACAHTERVVLARLEAGCTAPVAAYATVAADNIMTLHAAVIAMDGSATLRA 120
Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ G A N+G A+ + ++
Sbjct: 121 TAAGPIDTAENLGMTVARALLDDGASSLL 149
>gi|297170259|gb|ADI21296.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0010_09F21]
Length = 282
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 28/286 (9%)
Query: 36 HNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95
+ VI + TKGD+ + + T+ K F ++IE+K+ SG+ID AVHSAKD+P K
Sbjct: 7 EDYVIEKIVTKGDKESAKGRTQF-DKLNFVQDIEEKISSGDIDIAVHSAKDLPATESKEF 65
Query: 96 QISAYLPREDIRDVF------ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
+ RE D+ I ++ K + ++GTSSLRRK +
Sbjct: 66 DY--FYLRESTEDISTWSSDRIIFRDKNKKKFSSEMILGTSSLRRKMQAKFLLGAEKIFS 123
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
G I+TR+ KLN+ + I+LA AG RL + DF QG IC++
Sbjct: 124 LNGNIDTRIRKLNSGEYDCIILANAGCTRLGFNLNSYNL----DFLTPSAQGLICLQCLK 179
Query: 210 NNPKAQELVKVINHEDTW----DSVNCERAFLAELDGSCKSAIAGFA----YCKGSTLYF 261
+++ +D + ++ ++FL ++ C SAI+ +
Sbjct: 180 G-TDISKMLNNFFDKDKYKIHKLGMDIYKSFLRNINADCNSAISVRSVGNGRIANGEHKL 238
Query: 262 YGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
V GK F + D + A + + K + +
Sbjct: 239 TFQVF---GKNEFFSAEKT--HSDPQKLIELATEEFNRNNAKKLLD 279
>gi|317471677|ref|ZP_07931019.1| porphobilinogen deaminase domain-containing protein [Anaerostipes
sp. 3_2_56FAA]
gi|316900848|gb|EFV22820.1| porphobilinogen deaminase domain-containing protein [Anaerostipes
sp. 3_2_56FAA]
Length = 133
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ A+++A AG+KR ++ I ++E+ P+ GQG +C++ + Q L I+
Sbjct: 1 GQYSALIMAAAGLKRAGLKERISRYFSVEEMLPAAGQGTLCVQVRKDFD--QSLFFCIHD 58
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+T ER F+ LDG C S IA +A G+ L G+ + ++S NG
Sbjct: 59 RETELVTEAERGFVRALDGGCSSPIAAYAEITGNDLCLTGLYYNAADNTGRKMSINGKAQ 118
Query: 284 DAINIGRDAAQYIRF 298
DA +G A+ I+
Sbjct: 119 DAGELGCRLAEQIQE 133
>gi|41186|emb|CAA47279.1| hydroxymethylbilane synthase [Escherichia coli K-12]
Length = 89
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
KGLF +E+E L+ D AVHS KD+P +
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEF 89
>gi|302850188|ref|XP_002956622.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f.
nagariensis]
gi|300258149|gb|EFJ42389.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f.
nagariensis]
Length = 206
Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L S +GTSS RR A + + V+ RG +ETRL ++ + + A +L+ AG++RL
Sbjct: 1 ELMPGSRVGTSSSRRAAQIRHGFPHLQVVQLRGNVETRLERIKSREISATVLSMAGLQRL 60
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E + +L++++ P+ QGA+ + ++P + + I+H T+ V+ ERA L
Sbjct: 61 GCEDMASAVLSMDEMLPAACQGAVGVVCREDDPWVIQQLTAISHRSTFLEVSAERACLTA 120
Query: 240 LDG-------SCKSAI---AGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNG----NRC 283
L G A T+ V G+ + N+
Sbjct: 121 LLGSEEAGRAGEHFPALAWGCHASHHPDSATMDLDCFVSDLQGEGLTRYTEYDRLILNQT 180
Query: 284 DAINIGRDAAQYIRFISN 301
DA ++G +R ++
Sbjct: 181 DAEDLGSLYGNLMRMVAG 198
>gi|70933882|ref|XP_738249.1| porphobilinogen deaminase [Plasmodium chabaudi chabaudi]
gi|56514312|emb|CAH88223.1| porphobilinogen deaminase, putative [Plasmodium chabaudi chabaudi]
Length = 144
Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIG 59
K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ G
Sbjct: 22 ANKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINQNINVILKPIKTTGDKILDKTVGSFG 81
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKG+FT+E++ +LI +D VHS KD+PT L + +S +L R+ I D F+S +SL
Sbjct: 82 GKGIFTKELDDELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLH 141
Query: 120 D 120
D
Sbjct: 142 D 142
>gi|255029220|ref|ZP_05301171.1| porphobilinogen deaminase [Listeria monocytogenes LO28]
Length = 128
Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +L+G C+
Sbjct: 6 EDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEI 65
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAGFA + F G+V +DG I E + G + IG A+ + +
Sbjct: 66 PIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSEGADTII 122
>gi|330937205|gb|EGH41226.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 119
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 49/109 (44%)
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + L+ ++HEDT V ER+ L+G C+ IA +A +G
Sbjct: 1 AGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGCQVPIACYAVLEG 60
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
++ G+V G + + A +G A+ + ++
Sbjct: 61 DDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQGAADIL 109
>gi|146332076|gb|ABQ22544.1| porphobilinogen deaminase-like protein [Callithrix jacchus]
Length = 163
Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 29/154 (18%)
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL L+G
Sbjct: 2 NRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRHLEG 61
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD------- 284
C +A K LY G V + DG + + +G D
Sbjct: 62 GCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLVGIT 121
Query: 285 -----------AINIGRDAAQYIRFISNKNVFNF 307
A N+G A + KN+ +
Sbjct: 122 ARNIPRGPQLAAQNLGISLANLLLSKGAKNILDI 155
>gi|54310581|ref|YP_131601.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9]
gi|46915024|emb|CAG21799.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9]
Length = 104
Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 41/97 (42%)
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
++ + + L+ +NH +T + CERA L G C+ I ++ +G ++ +V D
Sbjct: 2 DDQRVRALLAPLNHHETATRIFCERAMNNRLQGGCQVPIGSYSELQGDQIWLRALVGEPD 61
Query: 270 GKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G G D +G A+ + K + +
Sbjct: 62 GSKMVRGEITGPAIDGEALGTQLAEQLLADGAKEILD 98
>gi|329945529|ref|ZP_08293267.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528774|gb|EGF55723.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 149
Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVH-------KIPPHNIVIIPLSTKGDRITNRTL 55
++ R+GTR S LAL + + +L + ++ + T GD L
Sbjct: 10 ERRLRLGTRGSRLALTQSGQVADALRQAAAAGARAPGCDNLELDLVTVRTDGDGDR-TPL 68
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED D +
Sbjct: 69 RQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPHDALCARDG 128
Query: 116 QSLKDLALHSVIGTSSLRRKA 136
+L L + +GT S RR A
Sbjct: 129 LTLATLPDGARVGTGSPRRAA 149
>gi|306835115|ref|ZP_07468155.1| possible hydroxymethylbilane synthase [Corynebacterium accolens
ATCC 49726]
gi|304568972|gb|EFM44497.1| possible hydroxymethylbilane synthase [Corynebacterium accolens
ATCC 49726]
Length = 158
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208
RG I+TR++K+ + + A++LAYAG+ R E +I + E F P+P QGA+ IE
Sbjct: 1 PLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRASDIFDPELFMPAPAQGALAIEAV 60
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
A L V++ + T ++ A LA L+ C + +A + G L G V A
Sbjct: 61 AGTEAAAALDAVVDEQATAAALAER-AVLARLEAGCTAPVAATSRWNGDQLTVRGGVFAL 119
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
DG + +G +A +G + + ++
Sbjct: 120 DGSRQLTATASGTAAEAAELGARVSDELFAQGAADLLG 157
>gi|51241768|dbj|BAD36778.1| porphobilinogen deaminase [Homo sapiens]
Length = 157
Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 29/147 (19%)
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+G C +A
Sbjct: 3 HPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVA 62
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------------------------NG 280
K LY G V + DG + + G
Sbjct: 63 VHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITARNIPRG 122
Query: 281 NRCDAINIGRDAAQYIRFISNKNVFNF 307
+ A N+G A + KN+ +
Sbjct: 123 PQLAAQNLGISLANLLLSKGAKNILDV 149
>gi|237833021|ref|XP_002365808.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49]
gi|211963472|gb|EEA98667.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49]
Length = 729
Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 61/306 (19%), Positives = 98/306 (32%), Gaps = 93/306 (30%)
Query: 91 LLKGLQISAYLPRED-IRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS--DISV 147
L + + + R D ++ K IGT SLRR+ALL +
Sbjct: 405 LPEETEEAGRAARASHTEDDAGGVEGEARKADEGRPRIGTCSLRRQALLYALLPPSSFQL 464
Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-----------------------EKV 184
+ RG ++TR++++ A LLA AG+KRL
Sbjct: 465 MGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLLSAMLAPSPSATPSPCPASSPNEASR 524
Query: 185 IKEI--------LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
E L + F P+ QG I ++ + L++ +N + CERAF
Sbjct: 525 GTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAF 584
Query: 237 LAELDGSCKSAI------------------------------------------------ 248
L LDGSC++ I
Sbjct: 585 LRALDGSCRTPIAGIAEWRAVPAQGEAPRPQSQNGSDEPGVEREGEEGCAGSSVERREGR 644
Query: 249 -----AGF--AYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297
G + + + L F G++ DGK R +A +GR A+ I+
Sbjct: 645 SEEGWGGHPDCFTEKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIK 704
Query: 298 FISNKN 303
+ +
Sbjct: 705 KAAGAD 710
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83
S L ++ + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS
Sbjct: 252 ASLLRVDSRLEYGELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHS 311
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFI 111
KD+PT+L +G +I AYLPRED RD I
Sbjct: 312 LKDVPTELPEGTEIGAYLPREDPRDALI 339
Score = 41.7 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLM 28
EK P R+G+R SPLALA A + L
Sbjct: 159 EKTPLRVGSRASPLALAQARQFVYRLA 185
>gi|169837036|ref|ZP_02870224.1| Porphobilinogen deaminase [candidate division TM7 single-cell
isolate TM7a]
Length = 119
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E + + F P+PGQG +CI+ N+ K + L+++IN ++ ER F DG C
Sbjct: 1 MSEYFDTDFFMPAPGQGILCIQCRENDNKIRHLLEIINDDEVTMMCEAEREFSKIFDGGC 60
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+ I + +G TL G+ +G + GN+ + I + A+ I+
Sbjct: 61 HTPIGCSSVIEGDTLKLKGM-FNDNGSRMLK-EVEGNKENPKEIAQKLAEEIKK 112
>gi|729693|sp|P40129|HEM3_ERWCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|41671|emb|CAA44890.1| hemC [Erwinia chrysanthemi]
Length = 89
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+G + + L ++GG
Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGXLLLDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
KGLF +E+E L+ D AVHS KD+P +
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEF 89
>gi|293194048|ref|ZP_06609930.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309]
gi|292819802|gb|EFF78811.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309]
Length = 166
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVI 221
+ A++LA AG++R+ + ++L+ P+P QGA+ IET ++P L+ +
Sbjct: 3 GERLDAVVLALAGLRRIGLDAHATDVLHPAIMMPAPSQGALAIETRDEDDPLLHALLGTL 62
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRN 279
NH T + + ERA L+ L C + + FA S L V++ DG+ + +
Sbjct: 63 NHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRERVKARGS 122
Query: 280 GNRCD------AINIGRDAAQYIRFISNKNVFNF 307
D A +G D A+ + V +
Sbjct: 123 LALTDSVGLDEAARLGEDVARQLLAGGAAEVTDL 156
>gi|149452688|ref|XP_001516450.1| PREDICTED: similar to hydroxymethylbilane synthase [Ornithorhynchus
anatinus]
Length = 218
Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGTSSLR 133
+D VHS KD+PT L G I A RE D + H ++L L SV+GTSSLR
Sbjct: 90 VDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKHVGKTLATLPEKSVVGTSSLR 149
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKE 187
R A L R + RG + TRL KL+ + AI+LA AG++RL + + +
Sbjct: 150 RAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRLGWQSRLGQ 204
>gi|218673006|ref|ZP_03522675.1| porphobilinogen deaminase [Rhizobium etli GR56]
Length = 111
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 69/108 (63%)
Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
QGAICIE+ V + +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G
Sbjct: 1 AQGAICIESRVGDTGIDDLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDL 60
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+ F G+++ DG+ H V+ +G+R DA +G A Q +R + F+
Sbjct: 61 IRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARAGSAFFD 108
>gi|294896302|ref|XP_002775489.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239881712|gb|EER07305.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 539
Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/280 (20%), Positives = 101/280 (36%), Gaps = 53/280 (18%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
+ GD L ++ G+FT + L++G D VHS KD+P G
Sbjct: 7 EVECHYREAPGDTNLKDPLWKMPETGVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTT 66
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHS--VIGTSSLRRK----------------ALL 138
+ A LPR D RD+ + + + ++ +SS RR+
Sbjct: 67 VVATLPRADPRDLLLIRRDAIEEMTSEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQF 126
Query: 139 LRWRSDISV-----IDFRGKIETRLNKLNNN---------KAHAILLAYAGIKRLKKEKV 184
R +I V + G ++TR+ KL + + H +++A A + R +
Sbjct: 127 RDVRGNIQVQPMGSSPYEGLLQTRMRKLMDPTIHDESLGCRPHGLVVAKAAVDRFIRSTR 186
Query: 185 -----------------IKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHED 225
+L + P + QGA+ IE +++V+ +N
Sbjct: 187 EEFKESRQLVQGYISDCRCMVLPLSANPTAAAQGALGIEVSTAPEKEHVRKIVRSLNDRS 246
Query: 226 TWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYG 263
T+D+ + E+ L G C I G L+ G
Sbjct: 247 TFDAASKEKELLNSYGGGCHQKIGCTILPRQYGDVLFLCG 286
>gi|325118217|emb|CBZ53768.1| putative porphobilinogen deaminase [Neospora caninum Liverpool]
Length = 683
Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 61/252 (24%), Positives = 92/252 (36%), Gaps = 76/252 (30%)
Query: 126 VIGTSSLRRKALLLRWRSDISV--IDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---- 179
+ GT SLRR+ALL S + RG ++TR+ ++ K A LLA AG+KRL
Sbjct: 411 IFGTCSLRRQALLHALLPPGSFHLMGLRGNVQTRMRRIEEGKLDATLLAAAGLKRLCLLP 470
Query: 180 ------------------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
+ V +L E F P+ QG + ++ + +
Sbjct: 471 SLLSPSRDSGPLASPLGCVSTHARGRACVEAVLLPAEVFVPAVCQGVVGVQCRSADTRIL 530
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG------------------- 256
L+ +N + CERAFL LDGSC++ IAG A +G
Sbjct: 531 SLLHSLNSLSSRGQARCERAFLRALDGSCRTPIAGIAQWRGVTDRRQETTQPERKTPDER 590
Query: 257 -----------------------STLYFYGIVLASDGKIFHEVSR--NG--NRCDAINIG 289
+ L F G++ DGK R G +A +G
Sbjct: 591 TDRRDVKGGEEGWGGHPDCFTEKAELRFCGVLATPDGKHLFRHERAVQGVRTPEEAEELG 650
Query: 290 RDAAQYIRFISN 301
A+ I+ +
Sbjct: 651 HAVAEEIKKAAG 662
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 53/73 (72%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
I+PL T GD + L ++GGKGLFT+E++ L++G++D VHS KD+PT+L G +I A
Sbjct: 242 IVPLQTTGDSALHLPLAQLGGKGLFTKELDVALLAGQVDVVVHSMKDVPTELPPGTEIGA 301
Query: 100 YLPREDIRDVFIS 112
+LPRED RD FI
Sbjct: 302 FLPREDPRDAFIY 314
Score = 39.0 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLM 28
R+G+R SPLALA A E L
Sbjct: 144 TLRVGSRASPLALAQAREFVYRLA 167
>gi|207347144|gb|EDZ73427.1| YDL205Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 144
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 6/135 (4%)
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I + + + + GQGA+ IE + K +++ I + ERA +
Sbjct: 2 RMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERALM 61
Query: 238 AELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRD 291
L+G C I + T L IV+ +G E + D++ G+
Sbjct: 62 RTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDSMACGKI 121
Query: 292 AAQYIRFISNKNVFN 306
A+ + K + +
Sbjct: 122 LAERMIADGAKKILD 136
>gi|313896589|ref|ZP_07830138.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312974774|gb|EFR40240.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 120
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+ GQGA+ IE ++ + + + D + ERAFL ++G C+ + +A
Sbjct: 1 MLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRVEGGCQIPVGVYAE 60
Query: 254 C-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G LY ++ + DG +G A IG A+ + + + +
Sbjct: 61 IGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDMGGREIL 113
>gi|255030292|ref|ZP_05302243.1| porphobilinogen deaminase [Listeria monocytogenes LO28]
Length = 84
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG
Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDM 87
LF E+E+ L ID AVHS KD+
Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDV 84
>gi|23011609|ref|ZP_00051918.1| COG0181: Porphobilinogen deaminase [Magnetospirillum
magnetotacticum MS-1]
Length = 119
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 56/114 (49%)
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251
E+ P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA
Sbjct: 2 EEMLPAVAQGALGIECRARDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAAL 61
Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
A +G L G++ DG V R G DA IGRDA ++ + F
Sbjct: 62 ARIQGDRLSLDGLLFLPDGSRHWAVHREGATSDAAEIGRDAGAELKRAAGDVYF 115
>gi|294637951|ref|ZP_06716219.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685]
gi|291088912|gb|EFE21473.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685]
Length = 94
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 38/87 (43%)
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
+NHE T V+ ERA L+G C+ I +A G L+ +V DG + R
Sbjct: 1 PLNHESTALRVSAERAMNMRLEGGCQVPIGSYAEIDGDQLWLRALVGRPDGSLIIRGERR 60
Query: 280 GNRCDAINIGRDAAQYIRFISNKNVFN 306
G A ++G D A + + + +
Sbjct: 61 GPLHQAESMGIDLADELLARGARAILD 87
>gi|329944047|ref|ZP_08292313.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328531093|gb|EGF57944.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 206
Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 25/169 (14%)
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVI 221
A++LA +G++RL E E+L++E P+P QGA+ +E + +
Sbjct: 30 GDLDAVVLALSGLRRLGLEHCASEVLDLETMLPAPAQGALAVEARAGEGSAALARAAAAL 89
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFH-- 274
+ E T +V ERA +A L C + + +A+ G L +V + DG
Sbjct: 90 DDEPTRLAVTAERALMARLGAGCAAPVGAWAHLSGGEQEQRVLALRAVVTSLDGGKEVGC 149
Query: 275 EVSRNGNRCD----------------AINIGRDAAQYIRFISNKNVFNF 307
E+S D A +G AA+ + V +
Sbjct: 150 ELSAELPEADSGPDTYGNAVAQAVRAAEALGVRAAEVLLEDGAAEVVDL 198
>gi|70780272|gb|AAZ08387.1| porphobilinogen deaminase [Toxoplasma gondii]
Length = 747
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 78/199 (39%), Gaps = 34/199 (17%)
Query: 91 LLKGLQISAYLPRED-IRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS--DISV 147
L + + + R D ++ K IGT SLRR+ALL +
Sbjct: 408 LPEETEEAGRAARASHTEDDAGGVEGEARKGDEGRPRIGTCSLRRQALLYALLPPSSFQL 467
Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-----------------------EKV 184
+ RG ++TR++++ A LLA AG+KRL
Sbjct: 468 MGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLLSAMLAPSPSATPSPCPAPSPNETSR 527
Query: 185 IKEI--------LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
E L + F P+ QG I ++ + L++ +N + CERAF
Sbjct: 528 GTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAF 587
Query: 237 LAELDGSCKSAIAGFAYCK 255
L LDGSC++ IAG A +
Sbjct: 588 LRALDGSCRTPIAGIAEWR 606
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83
S L ++ + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS
Sbjct: 255 ASLLRVDSRLEYGELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHS 314
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFI 111
KD+PT+L +G +I AYLPRED RD I
Sbjct: 315 LKDVPTELPEGTEIGAYLPREDPRDALI 342
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 249 AGFAYCKGSTL-YFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNKN 303
A G L F G++ DGK R +A +GR A+ I+ + +
Sbjct: 669 GVLATPDGKQLLRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGAD 728
Score = 42.1 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLM 28
EK P R+G+R SPLALA A + L
Sbjct: 159 EKTPLRVGSRASPLALAQARQFVYRLA 185
>gi|167038282|ref|YP_001665860.1| porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|166857116|gb|ABY95524.1| Porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC
33223]
Length = 168
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 7/163 (4%)
Query: 138 LLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS 197
+ SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+
Sbjct: 4 IQALMSDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLESIITEYFPPDVVVPA 63
Query: 198 PGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-- 254
P QG + +E + QE I T+ + ER L +C+ +A
Sbjct: 64 PCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASVERELLKAFGVNCRQPFGAYAQYRK 123
Query: 255 --KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + D + G + + +
Sbjct: 124 EKDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEE 164
>gi|221488268|gb|EEE26482.1| porphobilinogen deaminase, putative [Toxoplasma gondii GT1]
Length = 174
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ F P+ QG I ++ + L++ +N + CERAFL LDGSC++ IA
Sbjct: 37 PADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIA 96
Query: 250 GFAYCKGST-LYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNKN 303
G A + T L F G++ DGK R +A +GR A+ I+ + +
Sbjct: 97 GIAEWRAKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGAD 155
>gi|77799154|gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor]
Length = 98
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 215 QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIF 273
E + +NHEDT +V CER FLA LDG+C++ IA +AY F G++ + DG
Sbjct: 1 MEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPIAAYAYRDKDGNCSFRGLLASPDGSKV 60
Query: 274 HEVSRNGNR--CDAINIGRDAAQYIRFISNKNVFN 306
E +R+G D + +G+DA ++ + F+
Sbjct: 61 FETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFD 95
>gi|256751190|ref|ZP_05492071.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749915|gb|EEU62938.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1]
Length = 161
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 7/158 (4%)
Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202
SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+P QG
Sbjct: 2 SDIQIVPVRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLENIITEYFPPDVVVPAPCQGI 61
Query: 203 ICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC----KGS 257
+ +E + QE I T+ + ER L +C+ +A
Sbjct: 62 LAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFGVNCRQPFGAYAQYRKEEDEE 121
Query: 258 TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + D + G + + +
Sbjct: 122 KINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEE 157
>gi|326772618|ref|ZP_08231902.1| hydroxymethylbilane synthase [Actinomyces viscosus C505]
gi|326637250|gb|EGE38152.1| hydroxymethylbilane synthase [Actinomyces viscosus C505]
Length = 140
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDV-------------HKIPPHNIVIIPLSTKGDR 49
+ R+GTR S LAL + + +LM I ++ + T GD
Sbjct: 8 SRRLRLGTRGSRLALTQSGQVAEALMAAGGGGAAAAAGKASEGSGSLGIDLVTVRTDGDG 67
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
L ++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED RD
Sbjct: 68 DR-TPLRQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPRDA 126
Query: 110 FISHTAQSLKDLAL 123
+ + +L DL
Sbjct: 127 LCARDSLTLADLPE 140
>gi|467060|gb|AAA17244.1| hem3a [Mycobacterium leprae]
Length = 134
Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 9/121 (7%)
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C + + A
Sbjct: 2 QMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCSAPVGAIA 61
Query: 253 YCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
L G V A DG S A +G A + + +
Sbjct: 62 QVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVELFELGARE 121
Query: 304 V 304
+
Sbjct: 122 L 122
>gi|213623045|ref|ZP_03375828.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 88
Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 31/77 (40%)
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
V ERA L+G C+ I +A ++ +V A DG + R G+ A +
Sbjct: 2 RVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQM 61
Query: 289 GRDAAQYIRFISNKNVF 305
G A+ + + +
Sbjct: 62 GISLAEELLENGARAIL 78
>gi|62467569|gb|AAX83934.1| Hem3p [Saccharomyces cerevisiae]
Length = 97
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + K P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGL 95
K L+T+E+E L S ++D VHS KDMPT L +G
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGF 97
>gi|94468604|gb|ABF18151.1| hydroxymethylbilane synthase-like protein [Aedes aegypti]
Length = 349
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL
Sbjct: 1 MGWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSFLK 60
Query: 239 ELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEV 276
L G C + +A K + L G V + DGK
Sbjct: 61 TLGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGKTEIRA 104
>gi|113707391|gb|ABI36594.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 87
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
GA+ +E + +LV V++ +T ERAFL L+G C +A K LY
Sbjct: 1 GALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLY 60
Query: 261 FYGIVLASDGKIFHEVSRNGNR 282
G V + DG + +
Sbjct: 61 LTGGVWSLDGSDSIQETMQATI 82
>gi|167949214|ref|ZP_02536288.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 136
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 21/140 (15%)
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
AG+KRL E+ I + E P+ GQGAI IE ++ + L+ ++H DT V+
Sbjct: 6 PSAGLKRLGFEQRITAFIAPEQSLPAIGQGAIGIECRSDDAQVNALIAPLHHVDTAACVH 65
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFY-GIVLASDGKIFHEV----------SRNG 280
ERA L G S A V A+ G + G
Sbjct: 66 AERAMNNRLMGG--SPCA--------DCRLRDAGVPATSGCVVWWARSTVARSCVGEAEG 115
Query: 281 NRCDAINIGRDAAQYIRFIS 300
+A ++G A+ + +
Sbjct: 116 TPDEAESLGVGLAERLLELG 135
>gi|238488539|ref|XP_002375507.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357]
gi|220697895|gb|EED54235.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357]
Length = 90
Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LA+ A R+ L + P + I L T GDR L G K
Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRNCLQKI--APGRSFEIEALRTLGDRDQLTALYNFGAKS 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAK 85
L+T E+E+KL +GE+D VH K
Sbjct: 66 LWTTELEEKLNAGELDVIVHCLK 88
>gi|70931402|ref|XP_737390.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56512740|emb|CAH87819.1| hypothetical protein PC000109.00.0 [Plasmodium chabaudi chabaudi]
Length = 169
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL +K+ P+ QG I + ++ NNP+ +++K IN E + N ER
Sbjct: 33 LSRLNIQKLNTN-----VMCPALCQGIIAVTSNKNNPEISQILKNINDEKSQIMANIERT 87
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
FL ++DGSC I G+ + + F I+ +G H++ + + I +AA+
Sbjct: 88 FLHKIDGSCTMPIGGYTKFSKNKIIFNAIINDINGLESHKIKVVRHLNNLDGIADEAAEK 147
Query: 296 IRFISNKNVFN 306
I+ FN
Sbjct: 148 IKEKIGIEQFN 158
>gi|332187060|ref|ZP_08388801.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas
sp. S17]
gi|332013070|gb|EGI55134.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas
sp. S17]
Length = 107
Score = 92.9 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262
+ IET ++ A L+ I+H +T V ER+ LA L C S +A A G L
Sbjct: 1 MGIETRADDAAATMLIGSIDHAETHACVMAERSLLAALQADCHSPVAALASLSGEMLTLR 60
Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+LA DG G +G A + + V
Sbjct: 61 AELLAEDGSARVSGWVEGAL--GEELGPRLAIDLLDRAPPEV 100
>gi|73760286|dbj|BAE20060.1| hydroxymethylbilane synthase [Capra hircus]
Length = 109
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAY 173
++L+ L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA
Sbjct: 29 GKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILAA 88
Query: 174 AGIKRLKKEKVIKEILNIEDF 194
AG++R+ + + +IL+ E+
Sbjct: 89 AGLQRMGWQNRVGQILHPEEC 109
>gi|306835113|ref|ZP_07468154.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726]
gi|304569028|gb|EFM44552.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726]
Length = 89
Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA A R L+D + + ++T GD TN E G G+FT
Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDA----GFDSELHIVTTAGD--TNMAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
+ + + L GE D AVHS KD+PT +
Sbjct: 56 QALREALCRGECDIAVHSFKDLPTAEDDRFR 86
>gi|2415549|emb|CAA04300.1| porphobilinogen deaminase [Campylobacter jejuni]
Length = 88
Score = 86.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262
+ IE+ +++ K EL+K +N E+ + ER F+A L+G C+ I A G +
Sbjct: 1 LGIES-IHDEKILELLKCLNDENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVR 59
Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRD 291
++ DG + R + D G
Sbjct: 60 AVLGLPDGSEILKDKRMIKKNDFKGFGES 88
>gi|307826363|ref|ZP_07656567.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732604|gb|EFO03477.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 337
Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
+ TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +
Sbjct: 1 NVNTRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRI 57
>gi|3172393|gb|AAC18578.1| porphobilinogen deaminase [Geobacillus stearothermophilus]
Length = 57
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +G+R S LAL L + P + + TKGD+I N TL+++GGK
Sbjct: 2 RKIIVGSRRSKLALTQTNWVIEQLKRLGA--PFEFEVKEIVTKGDKIINVTLSKVGGK 57
>gi|213583680|ref|ZP_03365506.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 69
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%)
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +A ++ +V A DG + R G+ A +G A+ + + +
Sbjct: 1 PIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAIL 59
>gi|266622117|ref|ZP_06115052.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM
13479]
gi|288866173|gb|EFC98471.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM
13479]
Length = 121
Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E F P+ GQG + +E + + + E+ I ED + ER L LD C
Sbjct: 14 HYFACEAFIPAGGQGILAVEGRIED-RICEMAVRIQDEDAKTCLMLERKILKLLDAGCHE 72
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ ++ +G + +G + D + V G + + AA+ +R
Sbjct: 73 PVGVYSRIRGEEIEVFG-ISRRD-RETKRVYLTGGIGELDLLAERAAKGLR 121
>gi|225159193|ref|ZP_03725496.1| porphobilinogen deaminase [Opitutaceae bacterium TAV2]
gi|224802195|gb|EEG20464.1| porphobilinogen deaminase [Opitutaceae bacterium TAV2]
Length = 125
Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Query: 173 YAGIKRLK---KEKVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWD 228
AG++RL + L E P+ GQ AI ++ + P+ + T
Sbjct: 1 AAGLRRLGITGWPGLTFHPLGFEHMVPAVGQAAIALQCRSADAPRFAPHL----DARTAR 56
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262
+V ERAF L G C++A+ A TL+FY
Sbjct: 57 AVTLERAFQTALGGGCQTALGVHAG--DDTLWFY 88
>gi|281415815|ref|ZP_06247557.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
Length = 71
Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA +L ++ + T+GD +T +L +GG G+F
Sbjct: 3 PLRIGTRGSALATTQTSHVAEALTARS---GLAHELVVIRTEGD-VTTGSLASLGGTGVF 58
Query: 65 TEEIEKKLISG 75
+ ++ G
Sbjct: 59 ASALRAAVLDG 69
>gi|296803895|ref|XP_002842800.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
gi|238846150|gb|EEQ35812.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
Length = 282
Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 62/212 (29%), Gaps = 46/212 (21%)
Query: 86 DMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145
D+ TKL +A V SL+ L ++I TS +R A L R +
Sbjct: 93 DVSTKLPDSCDPAAIP-------VKAGLPYTSLQTLPEGAIIATSLVRPSAQLRRLFPTL 145
Query: 146 SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205
+ RG +E+ + + A V QG
Sbjct: 146 RFANVRGNVES------------LTIPQA------LGTVGSSTRGRPRARRRRHQGY--- 184
Query: 206 ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265
+ + + L V+ L C + I + L IV
Sbjct: 185 SSAGSADRLLALPSVLMC---------------ALRSGCNAPIGIETEWTATHLSIRAIV 229
Query: 266 LASDGKIFHEVSRNG---NRCDAINIGRDAAQ 294
++ D E + + + ++ G+ A+
Sbjct: 230 VSLDISQSVEDAIDAMMHTKDESDAPGQALAR 261
>gi|167946284|ref|ZP_02533358.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 51
Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100
GGKGLF +E+E+ ++ G D AVHS KD+P +L +GL +
Sbjct: 3 RFGGKGLFVKELEQAMLEGRADIAVHSMKDVPAELPEGLHLPVI 46
>gi|238917296|ref|YP_002930813.1| hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750]
gi|238872656|gb|ACR72366.1| Hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750]
Length = 287
Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 22/210 (10%)
Query: 70 KKLISGEIDCAVHSAKDM------PTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+ LI ID + + + +L G+ IS + R D R V I KD+
Sbjct: 53 EALIDDNIDMVLVDMRMLVEMEKSGQQLDDGIVISGVIKRRDPRYVMIRRRGT--KDVVE 110
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA--GIKRL-K 180
++V+ T S A++ ++ + I+ ++KL++ + A+ Y I RL
Sbjct: 111 NAVVVTDSDENAAVICEMYDNVECV-VENNIKDCMSKLDSEECDAVFAFYDDIRIARLYN 169
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE-----RA 235
K +++ D P GQG CI T+ + + ++H T S + E R
Sbjct: 170 GLKYKYTLMDFSDCVPPHGQGIYCILTNGKRSVIKHMFD-VSHRTTAMSFDIEEDIIRRL 228
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265
+ + SC + G + Y V
Sbjct: 229 LMNDYVKSCN----AYVKISGDKIEVYADV 254
>gi|291080775|ref|ZP_06535168.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 47
Score = 66.3 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75
P + ++P+ T+GD I + L ++GGKGLF +E+E L
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALRRK 46
>gi|58698960|ref|ZP_00373817.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534526|gb|EAL58668.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 62
Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
+IGTR S LA+ A E + L+D P +I I+ + + GD+ N L E
Sbjct: 13 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKSSGDKYANANLAE 62
>gi|3668361|gb|AAC61857.1| porphobilinogen deaminase [Prosthecochloris vibrioformis]
Length = 43
Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78
NI + + T GD + + L++IG GLFT++IEK L++GEID
Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEID 43
>gi|227485228|ref|ZP_03915544.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227236790|gb|EEI86805.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 32
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA 267
L+G C+ I +A G +L+ +V A
Sbjct: 1 MNTRLEGGCQVPIGSYAELDGDSLWLRALVGA 32
>gi|77176670|gb|ABA64453.1| hydroxymethylbilane synthase [Sus scrofa]
Length = 33
Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95
LFT+E+E L E+D VHS KD+PT L G
Sbjct: 1 LFTKELEHALERNEVDLVVHSLKDLPTVLPPGF 33
>gi|301102801|ref|XP_002900487.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101750|gb|EEY59802.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ A TL VL+ DGK + +G R +G+ A+
Sbjct: 1 MGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQLAER 48
>gi|209738608|gb|ACI70173.1| Porphobilinogen deaminase [Salmo salar]
gi|221220784|gb|ACM09053.1| Porphobilinogen deaminase [Salmo salar]
Length = 55
Score = 51.7 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL 43
+ RIGTR S LA L ++ P +I I+ +
Sbjct: 16 SRVIRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGI 54
>gi|289449787|ref|YP_003475693.1| putative porphobilinogen deaminase, dipyromethane cofactor binding
domain-containing protein [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184334|gb|ADC90759.1| putative porphobilinogen deaminase, dipyromethane cofactor binding
domain protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 946
Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 90/270 (33%), Gaps = 47/270 (17%)
Query: 4 KPFRIGTRCSPL----AL-AH-----AFETRSSLMDVHKIPPHNIVIIPLSTKG-DRITN 52
+P R+ T PL A+ A S L + + G DR +
Sbjct: 117 RPLRLNTNG-PLVRVGAIPWQIAVDRAEWVVSRLRRA----GLPFHLTQVPVSGFDRHSI 171
Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
+ E++ L++ +I+ V + ++P KL G++++A +
Sbjct: 172 INKEDYYASPAQVEKVFDALLNRQIEIGVIALPELPQKLPAGIRVAAISEVVAAEYALV- 230
Query: 113 HTAQSLKDLALHSV----IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
SL D + + SL R+ + + + E L L+ A
Sbjct: 231 ----SLSDHPAGEHDFIGVYSFSLARQLRSEKLGAHYEQRPY--NFEQALTCLHEGVWGA 284
Query: 169 ILLAYAGIKRLKKEKVIK-EILNIEDFPPSPGQGAICI-ETHVNNPKAQELVKVINHEDT 226
+ A + E+L+ + P GQGA+ + + + A + +++ +T
Sbjct: 285 CAIPLADLIFDGCSSEYSVEVLSKQRVVPPAGQGAVAVLVSDCEDELAAAVFSFLHNVET 344
Query: 227 ----WDSVNC--------ERAFLAELDGSC 244
+ ERA GSC
Sbjct: 345 EKIYRLEIEIANLVSDRKERA------GSC 368
>gi|291546287|emb|CBL19395.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
[Ruminococcus sp. SR1/5]
Length = 40
Score = 44.8 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLM 28
M++ IG+R S LA+ + R +
Sbjct: 1 MKRDKIVIGSRESKLAVLQSEMVRDYIK 28
>gi|90580517|ref|ZP_01236323.1| hypothetical protein VAS14_09065 [Vibrio angustum S14]
gi|90438426|gb|EAS63611.1| hypothetical protein VAS14_09065 [Vibrio angustum S14]
Length = 1030
Score = 43.2 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 2/112 (1%)
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +G +D + D+P+ GL L V S + L+DL
Sbjct: 323 KSLRQAYTNGVLDI-LTVVPDVPSNQDLGLFSQPILKSPFAIAVSDSKHYEKLQDLNGKR 381
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ S+ +++ I ++ + ++ L ++ A + A A +
Sbjct: 382 LALLSNWPIISVIKEKYPLIDIVTYS-HVDEALRAVSKGDVDAFIDAEAVLS 432
>gi|300290|gb|AAC60602.1| porphobilinogen deaminase [Homo sapiens]
Length = 38
Score = 42.8 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 152 GKIETRLNKLNNN-KAHAILLAYAGIKRLKKEKVIKE 187
G + TRL KL+ + AI+LA AG++R+ + +
Sbjct: 2 GNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQ 38
>gi|148840388|gb|ABR14625.1| hydroxymethylbilane synthase [Felis catus]
Length = 31
Score = 42.1 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 19 HAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT 51
+ L ++ P I+ +ST GD+I
Sbjct: 1 QTDSVVAVLKALY--PGLQFEIVAMSTTGDKIL 31
>gi|4469314|emb|CAB38454.1| hydroxymethylbilane synthase [Rattus norvegicus]
Length = 42
Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSL 27
+ R+GTR S LA + L
Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAML 42
>gi|169841475|ref|ZP_02874588.1| hypothetical protein cdivTM_30268 [candidate division TM7
single-cell isolate TM7a]
Length = 22
Score = 39.8 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 1 MEKKPFRIGTRCSPLALAHAF 21
M+ IGTR S LALA A
Sbjct: 1 MKSNKIIIGTRGSILALAQAE 21
>gi|34391573|gb|AAN46745.1| hydroxymethylbilane synthase [Sus scrofa]
Length = 37
Score = 39.4 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSL 27
+ R+GTR S LA ++L
Sbjct: 14 RVIRVGTRKSQLARIQTDSVVATL 37
>gi|168705561|ref|ZP_02737838.1| hypothetical protein GobsU_38873 [Gemmata obscuriglobus UQM 2246]
Length = 443
Score = 39.0 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 19/105 (18%)
Query: 210 NNPKAQELV-KVINHEDTWDSV---NCERAFLAELDGSCKSAIAGFAY-----CKGSTLY 260
++ + L+ ++ T V E+A L+ ++ + +
Sbjct: 168 DDAGVKALIEAKLDAAKTATRVSAFKAEKA----LE---SVPVSAEVRQKLEAVADTQVK 220
Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G + + ++G+ AI IG+ + +++K +F
Sbjct: 221 ARGRIARP---TALLIDKSGSMSQAIEIGKRLGALLAAVADKGLF 262
>gi|120434987|ref|YP_860673.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Gramella forsetii KT0803]
gi|117577137|emb|CAL65606.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Gramella forsetii KT0803]
Length = 242
Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 1/131 (0%)
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
E + + +++ L+ G + + + L R +I V+ G L +
Sbjct: 76 ESEIPTFLNAAKDGKNIGLLSEAGCPGVADPGAEIVKLAHRYNIQVVPLIGPSSILLAMM 135
Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
+ + + G + K+ EI +E Q I IET N K E +
Sbjct: 136 ASG-MNGQSFTFHGYLPIDKKDRKHEIKQLERISTEKNQAQIFIETPYRNMKFLEDLIQN 194
Query: 222 NHEDTWDSVNC 232
H T V C
Sbjct: 195 LHPTTRICVAC 205
>gi|229491101|ref|ZP_04384930.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321988|gb|EEN87780.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 693
Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%)
Query: 108 DVFISHTAQSLKDLALHSVIGTSSLRRKAL-LLRWRSDISVIDFRGKIETRLNKLNNNKA 166
D + +L LA ++++ SS A L R + + L A
Sbjct: 446 DHSSWRRSHTL--LAQYTLMNDSSAEEIAKSLAALRHAGEHKLIEDTV---RHLLRVGPA 500
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE-- 224
A+ A AG+ RL+ + + + +ET + A+ ++ +N
Sbjct: 501 TAVR-AAAGVVRLELGTRTSLHAD----LQTISSVSDVLETDWADTHARWILARLNDTGD 555
Query: 225 -DTWD--SVNCERAFLAEL 240
T + + E A L L
Sbjct: 556 LATRLQPTFSLEHALLKVL 574
>gi|169841914|ref|ZP_02875019.1| hypothetical protein cdivTM_32425 [candidate division TM7
single-cell isolate TM7a]
Length = 30
Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAY 100
++ +ID AVHS KDMP +GL +
Sbjct: 1 MLENKIDLAVHSLKDMPQNTPEGLLNVCF 29
>gi|320534143|ref|ZP_08034681.1| hypothetical protein HMPREF9057_02577 [Actinomyces sp. oral taxon
171 str. F0337]
gi|320133642|gb|EFW26052.1| hypothetical protein HMPREF9057_02577 [Actinomyces sp. oral taxon
171 str. F0337]
Length = 42
Score = 38.2 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 2 EKKPFRIGTRCSPLALAHAFET 23
E + R+GTR S LAL + +
Sbjct: 7 ESRRLRLGTRGSRLALTQSGQV 28
>gi|289809520|ref|ZP_06540149.1| hypothetical protein Salmonellaentericaenterica_35847 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 23
Score = 37.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 55 LTEIGGKGLFTEEIEKKLISGE 76
L ++GGKGLF +E+E L+
Sbjct: 1 LAKVGGKGLFVKELEIALLEKR 22
>gi|242211549|ref|XP_002471612.1| predicted protein [Postia placenta Mad-698-R]
gi|220729288|gb|EED83165.1| predicted protein [Postia placenta Mad-698-R]
Length = 1026
Score = 37.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 18/115 (15%)
Query: 5 PFRIGTRCSPLALAHA--FETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRT------L 55
P IG R S ++L + +M+ + + +TK ++ L
Sbjct: 852 PIPIG-RGSKVSLYQCLDAFVKEEVMEKSDAWNCPHCKALRKATKNLSLSRLPPVLLIHL 910
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAK---DMPTKLLKGLQISAYLPREDIR 107
KG FT++IE +D + S MP L G+ + R+D R
Sbjct: 911 KRFSSKGHFTDKIETF-----VDYPIRSLDLTNYMPPPLPPGVDMGLQPSRDDPR 960
>gi|291541313|emb|CBL14424.1| L-serine ammonia-lyase [Roseburia intestinalis XB6B4]
Length = 294
Score = 37.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 230 VNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYG 263
V ERAFLA G C++ I A G ++ G
Sbjct: 152 VIAERAFLAGAAGGCQAEIGSASAMAAGGVVHLSG 186
>gi|291534472|emb|CBL07584.1| L-serine ammonia-lyase [Roseburia intestinalis M50/1]
Length = 294
Score = 37.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 230 VNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYG 263
V ERAFLA G C++ I A G ++ G
Sbjct: 152 VIAERAFLAGAAGGCQAEIGSASAMAAGGVVHLSG 186
>gi|240145235|ref|ZP_04743836.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Roseburia intestinalis L1-82]
gi|257202699|gb|EEV00984.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Roseburia intestinalis L1-82]
Length = 294
Score = 37.4 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 230 VNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYG 263
V ERAFLA G C++ I A G ++ G
Sbjct: 152 VIAERAFLAGAAGGCQAEIGSASAMAAGGVVHLSG 186
>gi|260907292|ref|ZP_05915614.1| hypothetical protein BlinB_18293 [Brevibacterium linens BL2]
Length = 321
Score = 37.1 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 195 PPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELD 241
P +G I E + + + ++H + ER L EL
Sbjct: 16 LPENSRGDIAAEIRATIDDMVEARLDGLDHPADEQTAAAERDVLEELG 63
>gi|317406131|gb|EFV86388.1| glutamine-binding periplasmic protein [Achromobacter xylosoxidans
C54]
Length = 247
Score = 37.1 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 55/168 (32%), Gaps = 27/168 (16%)
Query: 18 AHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE-IGGKGLFT----EEIEKKL 72
AHA ET ++ D PP V T D L +G K + + + L
Sbjct: 23 AHAQETIRAVTDA-TFPPMEFVKDGKRTGFDIELVEALAAAMGKKVEWIDIDFKGLIPAL 81
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV-----FISHTA--QSLKDLALHS 125
+G D AV + P + S + D ++LKDL
Sbjct: 82 QAGRADIAVSAIYITP-------ERSKVVDFTDPYYAGGLVVLTKKDGPVKTLKDLDGRK 134
Query: 126 V---IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
V +GT S+ L + ++ + N + +A A +
Sbjct: 135 VSVQVGTKSV---NYLKEHYPSVQRVEVEKN-QEMFNLVQIGRADAAV 178
>gi|262283718|ref|ZP_06061482.1| ribose ABC transporter ribose-binding protein [Streptococcus sp.
2_1_36FAA]
gi|262260564|gb|EEY79266.1| ribose ABC transporter ribose-binding protein [Streptococcus sp.
2_1_36FAA]
Length = 322
Score = 37.1 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 245 KSAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVS--RNGNRCD-AINIGRDAAQYI- 296
++AI A K + L YG+ + D K F + G I +GR AQ I
Sbjct: 230 RAAIGALAAIKNNGLNRKLSIYGVDGSPDIKNFLATTNDIEGTVAQSPIQMGRKVAQVIE 289
Query: 297 RFISNK 302
K
Sbjct: 290 LMQEGK 295
>gi|331697403|ref|YP_004333642.1| glycosyl transferase family 51 [Pseudonocardia dioxanivorans
CB1190]
gi|326952092|gb|AEA25789.1| glycosyl transferase family 51 [Pseudonocardia dioxanivorans
CB1190]
Length = 711
Score = 36.7 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 39/100 (39%), Gaps = 18/100 (18%)
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI---AGFAYCKGSTL----YF 261
+ +A + +N D+ ++ E+ + + + +A + +
Sbjct: 445 ADAARAAGITSPLNDPDSRLALG-----NKEV-----TPVELASAYATIADGGVYHVPHL 494
Query: 262 YGIVLASDGKIFHEV-SRNGNRCDAINIGRDAAQYIRFIS 300
V+ SDG++ ++ S +G R + R+ + + ++
Sbjct: 495 ISKVVTSDGRVLYQSRSSDGERRFPEQVARNVTEAMLDVA 534
>gi|313214761|emb|CBY41030.1| unnamed protein product [Oikopleura dioica]
Length = 166
Score = 36.3 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +G+ RR + +L+ R ++++D G+ + +K LL + G+ R++
Sbjct: 37 LPKGLAMGSDEPRRGSQILQRR--MTIMDVSGQPKEENHK------GGQLLWFRGLNRIQ 88
Query: 181 KEKVIKEILNIEDF 194
++ + +
Sbjct: 89 QQIRVVHAFRSSMY 102
>gi|313225952|emb|CBY21095.1| unnamed protein product [Oikopleura dioica]
Length = 1173
Score = 36.3 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +G+ RR + +L+ R ++++D G+ + +K LL + G+ R++
Sbjct: 1044 LPKGLAMGSDEPRRGSQILQRR--MTIMDVSGQPKEENHK------GGQLLWFRGLNRIQ 1095
Query: 181 KEKVIKEILNIEDF 194
++ + +
Sbjct: 1096 QQIRVVHAFRSSMY 1109
>gi|116622078|ref|YP_824234.1| hypothetical protein Acid_2965 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225240|gb|ABJ83949.1| protein of unknown function UPF0118 [Candidatus Solibacter usitatus
Ellin6076]
Length = 612
Score = 36.3 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI +++ + + H+A P + +++ +PRE+ D+F + L
Sbjct: 488 ADEIAAAMLAQLLSASGHAAIPFPVDFARDEKLAIVVPREN--DLFC------ISALPPF 539
Query: 125 SVIGTSSLRRKALLLRWRSDISVID----FRGKIETRLNKLNNNKAHAILLAYA 174
+ G +L R L +I F G E L + ++ ++ + A
Sbjct: 540 AFAGAITLVR--QLKLRFPRTRIIAGVWGFSGNTERALQRFQQSQPDYLVTSLA 591
>gi|308809988|ref|XP_003082303.1| putative dehydratase/deaminase (ISS) [Ostreococcus tauri]
gi|116060771|emb|CAL57249.1| putative dehydratase/deaminase (ISS) [Ostreococcus tauri]
Length = 536
Score = 36.3 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 30/169 (17%)
Query: 65 TEEIEKK---------LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF----- 110
T+E++ L + D A+ S ++ +L + + S YL RED++ VF
Sbjct: 30 TKELDVAREAWYVRAILTADVYDVAIESPCEIAPRLSERIGASIYLKREDLQPVFSFKIR 89
Query: 111 -ISHTAQSLKDLALHSVIGTSSLRRKALLLRW----RSDISVIDFRGKIETRLNKLN--- 162
+ + L + + TSS A + R + +
Sbjct: 90 GAYNKMKQLSEEERARGVITSSAGNHAQGVAMSGKARVQGDHRHAGDDARDQGGAVRRLG 149
Query: 163 -----NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
+ A AYA K+ KE+ + I +D GQG + +E
Sbjct: 150 GEVVLSGNYDAT-QAYA--KQRSKEEGLTYIPPFDDPFVIAGQGTVGVE 195
>gi|332290659|ref|YP_004429268.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Krokinobacter diaphorus 4H-3-7-5]
gi|332168745|gb|AEE18000.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Krokinobacter diaphorus 4H-3-7-5]
Length = 241
Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
+S+ L+ V G + + + + + I V+ G + +++ + A+
Sbjct: 87 QGESVGLLSEAGVPGVADPGAEVVKIAHQKGIQVVPLVGPSSILMAMMSSG-MNGQNFAF 145
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G + ++ +E+ +E GQ + IET N K E + H DT V C
Sbjct: 146 NGYLPIDAQQRKQELKRLERLSSEQGQTQLFIETPYRNNKMLEDICNTVHPDTQVCVAC 204
>gi|239820200|ref|YP_002947385.1| Glucan 1,4-alpha-glucosidase [Variovorax paradoxus S110]
gi|239805053|gb|ACS22119.1| Glucan 1,4-alpha-glucosidase [Variovorax paradoxus S110]
Length = 463
Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 28/109 (25%), Gaps = 7/109 (6%)
Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG-IKRLKKEKVIKEILNI--EDFP 195
R R R A LLA A + R + ++ + +
Sbjct: 168 RWNRPQHDGAPLRALALLRWA--AGGHLDAPLLAEAAELIRFDLDFTLRRWREPSYDIWE 225
Query: 196 PSPGQGAICIETHVNNPKAQE-LVKVINHEDTWDSVNCE-RAFLAELDG 242
GQ + ++ + E RA L LDG
Sbjct: 226 EELGQHYYTLRVAGAALAEGAAWLEGLGDAAQAQRCREESRAVLRLLDG 274
>gi|145300111|ref|YP_001142952.1| LysR family transcriptional regulator [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852883|gb|ABO91204.1| transcriptional regulator, LysR-family [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 303
Score = 35.9 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 19/120 (15%)
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---KKE 182
V+ S LR + ++S+ + + L + + A +L RL
Sbjct: 102 VLHPSVLRLIHDFRQAWPEVSLHPIENSMPNLVRDLMSEELDAAIL------RLPCSSSS 155
Query: 183 KVIKEILNIEDFP-------PSPGQGAICIETHVNNPKA---QELVKVINHEDTWDSVNC 232
+ +++ E+ P GAI IE +P +EL ++ T
Sbjct: 156 ALTHHLIDEEEMLIALPPHHPLASTGAIAIEALAQDPFILFPRELGPGLHDAITQRCQRA 215
>gi|322386642|ref|ZP_08060267.1| ribose ABC superfamily ATP binding cassette transporter, binding
protein [Streptococcus cristatus ATCC 51100]
gi|321269315|gb|EFX52250.1| ribose ABC superfamily ATP binding cassette transporter, binding
protein [Streptococcus cristatus ATCC 51100]
Length = 328
Score = 35.9 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 245 KSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVS--RNGNRCD-AINIGRDAAQYI 296
++AI A K +Y YG+ + D K F + G I +GR A+ I
Sbjct: 236 RAAIGALAAIKDQGVAEKIYIYGVDGSPDIKNFLANTNDIQGTVAQSPIQMGRKVAEVI 294
>gi|269791882|ref|YP_003316786.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099517|gb|ACZ18504.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 290
Score = 35.9 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 13/148 (8%)
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
R RDV L+++ + R ++ G+ +
Sbjct: 27 ERGLPRDVIAGRMLDRLREMKSSVLSVEQRPPRG----------RLVGGEGEALEAYRRS 76
Query: 162 N---NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218
+ A + A + + + + G + + +N+P +EL+
Sbjct: 77 QGALSGDLVATACSMAMKVAVGNAAMRRIVACPTAGSCGIVPGVLGAYSRLNDPSEEELL 136
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKS 246
K + SV +RA LA +G C++
Sbjct: 137 KALIVAGAVGSVIAQRATLAGAEGGCQA 164
>gi|332358396|gb|EGJ36221.1| ribose ABC superfamily ATP binding cassette transporter, binding
protein [Streptococcus sanguinis SK49]
Length = 328
Score = 35.9 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 8/66 (12%)
Query: 245 KSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVS--RNGNRCD-AINIGRDAAQYI- 296
++AI A K + YG+ + D K F + G I +GR AQ I
Sbjct: 236 RAAIGALAAIKNQGLDKRISIYGVDGSPDIKNFLATTSDIEGTVAQSPIQMGRKVAQVIE 295
Query: 297 RFISNK 302
K
Sbjct: 296 LMQEGK 301
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.164 0.502
Lambda K H
0.267 0.0504 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,670,811,018
Number of Sequences: 14124377
Number of extensions: 317217335
Number of successful extensions: 838687
Number of sequences better than 10.0: 2345
Number of HSP's better than 10.0 without gapping: 4417
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 826137
Number of HSP's gapped (non-prelim): 4769
length of query: 307
length of database: 4,842,793,630
effective HSP length: 138
effective length of query: 169
effective length of database: 2,893,629,604
effective search space: 489023403076
effective search space used: 489023403076
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 81 (35.5 bits)