BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase
[Candidatus Liberibacter asiaticus str. psy62]
(307 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|90414241|ref|ZP_01222221.1| porphobilinogen deaminase [Photobacterium profundum 3TCK]
gi|90324688|gb|EAS41229.1| porphobilinogen deaminase [Photobacterium profundum 3TCK]
Length = 341
Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PGLVVELVPMVTKGDIILDTPLAKVGG 89
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ +
Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ + + L+ +NH +T + CERA L
Sbjct: 210 MHDRIRSAIEPEESLPAVGQGAVGIECRLDDHRVRALLATLNHPETATRIFCERAMNNHL 269
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I ++ +G ++ +V DG G D +G A+ +
Sbjct: 270 QGGCQVPIGSYSELQGDQIWLRALVGEPDGSKMVRGEITGAAIDGEALGTQLAEQLLADG 329
Query: 301 NKNVFN 306
K + +
Sbjct: 330 AKEILD 335
>gi|209693832|ref|YP_002261760.1| porphobilinogen deaminase [Aliivibrio salmonicida LFI1238]
gi|226706282|sp|B6EPK1|HEM3_ALISL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|208007783|emb|CAQ77905.1| porphobilinogen deaminase HemC [Aliivibrio salmonicida LFI1238]
Length = 311
Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 168/307 (54%), Gaps = 3/307 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L +IG
Sbjct: 1 MSQQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P + +GL + R D RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + +GT SLRR+ L +R D+ + + RG + TRL KL++ AI+LA AG+ RL
Sbjct: 119 ELPQGATVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E IK + E P+ GQGA+ IET +N+ + + L+ +NH +T V CERA
Sbjct: 179 GLEDRIKSSIEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNHPETAHRVLCERAMNNR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG I G DA +G A+ +
Sbjct: 239 LEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSIMVRGETTGPVSDAEELGTKLAEQLLND 298
Query: 300 SNKNVFN 306
K++ +
Sbjct: 299 GAKDILD 305
>gi|90581042|ref|ZP_01236842.1| porphobilinogen deaminase [Vibrio angustum S14]
gi|90437738|gb|EAS62929.1| porphobilinogen deaminase [Vibrio angustum S14]
Length = 310
Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSNQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIIVELVPMITKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L
Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLAALSDQATTTRVLCERAMNNYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G A +G A+ +
Sbjct: 239 QGGCQVPIGSYAELEGDQIWLRALVGEPDGSKIVRAEIRGPIEQAEQLGETLAEQLLNDG 298
Query: 301 NKNVFN 306
+++ +
Sbjct: 299 ARDILD 304
>gi|330444901|ref|ZP_08308556.1| porphobilinogen deaminase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489211|dbj|GAA03053.1| porphobilinogen deaminase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 310
Score = 295 bits (754), Expect = 6e-78, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MTSQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ V D RG + TRL KL++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQIRAQRPDLIVNDLRGNVNTRLRKLDDGEYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + E P+ GQGA+ IE +++ + ++L+ +NH+ T V CERA L
Sbjct: 179 MDDRIRSEIAPETSLPAVGQGAVGIECRLDDTRVRQLLDALNHQPTATRVLCERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G A +G A +
Sbjct: 239 QGGCQVPIGSYALLEGDEIWLRALVGEPDGSKIVRAEIRGPIAQAEQLGTTLADQLLADG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKDILD 304
>gi|157368427|ref|YP_001476416.1| porphobilinogen deaminase [Serratia proteamaculans 568]
gi|167008819|sp|A8G848|HEM3_SERP5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157320191|gb|ABV39288.1| porphobilinogen deaminase [Serratia proteamaculans 568]
Length = 313
Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMANH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRERRPDLIVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDETTRALLAPLNHAVTETRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G +L+ +V + DG R G A +G + A+ +
Sbjct: 239 EGGCQVPIGSYAELDGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGIELAEELLAQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|261210172|ref|ZP_05924469.1| porphobilinogen deaminase [Vibrio sp. RC341]
gi|260840712|gb|EEX67261.1| porphobilinogen deaminase [Vibrio sp. RC341]
Length = 311
Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKSARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLEQG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|270264251|ref|ZP_06192518.1| porphobilinogen deaminase [Serratia odorifera 4Rx13]
gi|270041900|gb|EFA14997.1| porphobilinogen deaminase [Serratia odorifera 4Rx13]
Length = 313
Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ S
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIDFPAGLGLVTICERDDPRDAFVSNRFASFDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR++ L R D+ V D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQSQLRERRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDDATRALLAPLNHAATDIRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G +L+ +V + DG R G A +G + A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGVELAEELLARG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|330827978|ref|YP_004390930.1| Porphobilinogen deaminase [Aeromonas veronii B565]
gi|328803114|gb|AEB48313.1| Porphobilinogen deaminase [Aeromonas veronii B565]
Length = 330
Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L +H P + ++P+ST+GD+I + L ++GG
Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALH--PQLQVELVPMSTQGDKILDTPLAKVGG 79
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +++ +
Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAE 139
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHTETRARVLTERAMNRAL 259
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 260 QGGCQVPIGAYALVEGEQIWLRGLVGSPDGTQVIRDEIRGPLADGEALGEQLAQRLLAAG 319
Query: 301 NKNVF 305
+
Sbjct: 320 ADEIL 324
>gi|162139476|ref|YP_855002.2| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 315
Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + +
Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 245 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRLLADG 304
Query: 301 NKNVF 305
+
Sbjct: 305 ADVIL 309
>gi|262172879|ref|ZP_06040557.1| porphobilinogen deaminase [Vibrio mimicus MB-451]
gi|261893955|gb|EEY39941.1| porphobilinogen deaminase [Vibrio mimicus MB-451]
Length = 311
Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|308051395|ref|YP_003914961.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799]
gi|307633585|gb|ADN77887.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799]
Length = 310
Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 176/305 (57%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L H P + ++ +STKGDRI + L ++GG
Sbjct: 1 MARKEIRIATRKSPLALWQAEFVKAELEKAH--PGLTVTLLKMSTKGDRILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E +++GE D AVHS KD+P + +GL ++ RED RD F+S+T ++L D
Sbjct: 59 KGLFVKELEVAMLNGEADIAVHSMKDVPVEFPEGLGLAVICDREDPRDAFVSNTYKNLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++G+SSLRR+ L R D+ V D RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPHGAIVGSSSLRRQCQLRAMRPDLDVRDLRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I + E P+ GQGA+ IE +++ + L+ V+NH T V ERA L
Sbjct: 179 LEERITAFIEPEQSLPANGQGAVGIECRLDDAELLALIGVLNHAPTHARVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I ++ +G TL+ G+V DG + G DA +G + A+ +
Sbjct: 239 EGGCQVPIGAYSVIEGDTLWLRGLVGDPDGSKIIQDELRGPVADAQKLGIELAERLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AGEIL 303
>gi|117559297|gb|ABK36245.1| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 330
Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 79
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + +
Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 139
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 259
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 260 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRLLADG 319
Query: 301 NKNVF 305
+
Sbjct: 320 ADVIL 324
>gi|294142612|ref|YP_003558590.1| porphobilinogen deaminase [Shewanella violacea DSS12]
gi|293329081|dbj|BAJ03812.1| porphobilinogen deaminase [Shewanella violacea DSS12]
Length = 309
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+ +S+ D
Sbjct: 59 KGLFVKELEIAMLDGRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPKGAVVGTSSLRRQCQIRAMRPDLKITDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERISSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHTETRYRVTAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I FA +G TL G+V DG + G + DA IG A+ +
Sbjct: 239 QGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTSVGPKTDAKAIGITLAKELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|262404857|ref|ZP_06081411.1| porphobilinogen deaminase [Vibrio sp. RC586]
gi|262348941|gb|EEY98080.1| porphobilinogen deaminase [Vibrio sp. RC586]
Length = 311
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYVKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDDIWLRALVGEPDGSQIVHGEIRGPRSEAEQLGITLAEQLLEQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|311281516|ref|YP_003943747.1| porphobilinogen deaminase [Enterobacter cloacae SCF1]
gi|308750711|gb|ADO50463.1| porphobilinogen deaminase [Enterobacter cloacae SCF1]
Length = 318
Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLRIATRQSPLALWQAHYVKDRLTACH--PGLQVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL ++ RED RD F+S+ SL
Sbjct: 64 KGLFVKELELALLEHRADIAVHSMKDVPVEFPQGLGLTTICEREDPRDAFVSNQYASLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAAQRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LESRIRQALSPEQSLPAVGQGAVGIECRLDDDATRALLAPLNHPETAVRVGAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ +V A DG R G +A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELQGGELWLRALVGAPDGSRMVRGERRGTPEEAERLGVSLAEELLDNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|258626632|ref|ZP_05721462.1| porphobilinogen deaminase [Vibrio mimicus VM603]
gi|258581136|gb|EEW06055.1| porphobilinogen deaminase [Vibrio mimicus VM603]
Length = 311
Score = 292 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLVPLNHTDTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|254291929|ref|ZP_04962710.1| porphobilinogen deaminase [Vibrio cholerae AM-19226]
gi|150422139|gb|EDN14105.1| porphobilinogen deaminase [Vibrio cholerae AM-19226]
Length = 311
Score = 292 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSKIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|59710673|ref|YP_203449.1| porphobilinogen deaminase [Vibrio fischeri ES114]
gi|197333951|ref|YP_002154835.1| porphobilinogen deaminase [Vibrio fischeri MJ11]
gi|75431912|sp|Q5E8T5|HEM3_VIBF1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706298|sp|B5FF97|HEM3_VIBFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|59478774|gb|AAW84561.1| hydroxymethylbilane synthase [Vibrio fischeri ES114]
gi|197315441|gb|ACH64888.1| porphobilinogen deaminase [Vibrio fischeri MJ11]
Length = 311
Score = 292 bits (746), Expect = 6e-77, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 168/307 (54%), Gaps = 3/307 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MSQQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L R D+ + + RG + TRL KL++ AI+LA AG+ RL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEARPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E IK + E P+ GQGA+ IE +++ + + L++ +NH +T + V CERA
Sbjct: 179 GLEDRIKSAIEPEQSLPAVGQGAVGIEARLDDDRLRALLEPLNHPETANRVLCERAMNNR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG + +G DA +G A +
Sbjct: 239 LEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSVMIRGEVSGPVSDAEALGTQLADQLLND 298
Query: 300 SNKNVFN 306
K +
Sbjct: 299 GAKEILE 305
>gi|255743926|ref|ZP_05417881.1| porphobilinogen deaminase [Vibrio cholera CIRS 101]
gi|262151165|ref|ZP_06028304.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1]
gi|262167035|ref|ZP_06034752.1| porphobilinogen deaminase [Vibrio cholerae RC27]
gi|262189994|ref|ZP_06048299.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93]
gi|11386839|sp|Q9KVM1|HEM3_VIBCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|255738409|gb|EET93799.1| porphobilinogen deaminase [Vibrio cholera CIRS 101]
gi|262024553|gb|EEY43237.1| porphobilinogen deaminase [Vibrio cholerae RC27]
gi|262031059|gb|EEY49684.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1]
gi|262034117|gb|EEY52552.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93]
Length = 311
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|153214841|ref|ZP_01949649.1| porphobilinogen deaminase [Vibrio cholerae 1587]
gi|153830620|ref|ZP_01983287.1| porphobilinogen deaminase [Vibrio cholerae 623-39]
gi|124115084|gb|EAY33904.1| porphobilinogen deaminase [Vibrio cholerae 1587]
gi|148873892|gb|EDL72027.1| porphobilinogen deaminase [Vibrio cholerae 623-39]
Length = 311
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|188532369|ref|YP_001906166.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99]
gi|238058922|sp|B2VG55|HEM3_ERWT9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188027411|emb|CAO95258.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99]
Length = 313
Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+ H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRRSPLALWQAEYVQRRLIACH--PGLRVELLPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P GL + A RED D F+SH S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ + L+ +NH +T V+ ERA L
Sbjct: 179 LGDRIRQVMPAEESLPAVGQGAVGIECRLDDIQTIALLAALNHSETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + L+ G+V + DG R G R DA +G A+ +
Sbjct: 239 EGGCQVPIGSYALLEDDQLWLRGLVGSPDGNEMVRGERRGPRADAEKMGISLAEELLENG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|262273217|ref|ZP_06051033.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886]
gi|262222795|gb|EEY74104.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886]
Length = 311
Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 165/306 (53%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RI TR SPLAL A +++L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MTSTPIRIATRQSPLALWQAEFVKAALEATH--PGLTVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ S+ +
Sbjct: 59 KGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYTSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAMRPDLVIKDLRGNVGTRLGKLDNGEYDAIILASAGLKRLN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ + + L++ + +T V CERA L
Sbjct: 179 LHDRIRNEIEPEEILPAVGQGAVGIECRLDDERVRALLEPLADANTTYRVLCERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G A +G A+ +
Sbjct: 239 MGGCQVPIGSYAEIHGDQIHLRALVGEPDGSKIVRGEVTGPLEKAEELGTGLAEQLLDDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARAILE 304
>gi|327483021|gb|AEA77428.1| Porphobilinogen deaminase [Vibrio cholerae LMA3894-4]
Length = 311
Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|89074445|ref|ZP_01160922.1| porphobilinogen deaminase [Photobacterium sp. SKA34]
gi|89049733|gb|EAR55283.1| porphobilinogen deaminase [Photobacterium sp. SKA34]
Length = 310
Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ + H P ++ ++P+ TKGD I + L ++GG
Sbjct: 1 MSNQLIRIATRKSPLAMWQAEFVKAEIEQAH--PGISVELVPMITKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ +
Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK
Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L
Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLTALSDQATTTRVLCERAMNNHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G A +G A+ +
Sbjct: 239 QGGCQVPIGSYAELEGDQVWLRALVGEPDGSKIVRAEIRGPIEQAEQLGETLAEQLLNDG 298
Query: 301 NKNVFN 306
+++ +
Sbjct: 299 ARDILD 304
>gi|288937772|ref|YP_003441831.1| porphobilinogen deaminase [Klebsiella variicola At-22]
gi|288892481|gb|ADC60799.1| porphobilinogen deaminase [Klebsiella variicola At-22]
Length = 318
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNG 303
Query: 301 NKNVF 305
+++
Sbjct: 304 ARDIL 308
>gi|153803403|ref|ZP_01957989.1| porphobilinogen deaminase [Vibrio cholerae MZO-3]
gi|124121060|gb|EAY39803.1| porphobilinogen deaminase [Vibrio cholerae MZO-3]
Length = 311
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|310766129|gb|ADP11079.1| porphobilinogen deaminase [Erwinia sp. Ejp617]
Length = 313
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 173/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ L+ +NH++T V+ ERA L
Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLDDMHTIGLLAALNHDETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ G+V + DG R G+R DA +G A+ +
Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|238793582|ref|ZP_04637206.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909]
gi|238727172|gb|EEQ18702.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909]
Length = 313
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S + D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICERDDPRDAFVSPHFAHIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LASRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRVTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G+TL+ G+V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRGLVGAPDGSEIIRGERRGPAENAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|259906881|ref|YP_002647237.1| porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96]
gi|224962503|emb|CAX53958.1| Porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96]
gi|283476674|emb|CAY72503.1| hemC [Erwinia pyrifoliae DSM 12163]
Length = 313
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 172/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE + + L+ +NH++T V+ ERA L
Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLEDMHTIGLLAALNHDETACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ G+V + DG R G+R DA +G A+ +
Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|238750675|ref|ZP_04612174.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380]
gi|238711065|gb|EEQ03284.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380]
Length = 313
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLNKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LKSRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLVPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G DA +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSEIIRGERRGPAEDAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|206580079|ref|YP_002241132.1| porphobilinogen deaminase [Klebsiella pneumoniae 342]
gi|290513167|ref|ZP_06552529.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55]
gi|226706289|sp|B5XYL1|HEM3_KLEP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|206569137|gb|ACI10913.1| porphobilinogen deaminase [Klebsiella pneumoniae 342]
gi|289774378|gb|EFD82384.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55]
Length = 313
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L
Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|238765355|ref|ZP_04626280.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638]
gi|238696442|gb|EEP89234.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638]
Length = 313
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSNYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDYTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G+TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELDGNTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELADELLARG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|15640152|ref|NP_229779.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587718|ref|ZP_01677479.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121728303|ref|ZP_01681334.1| porphobilinogen deaminase [Vibrio cholerae V52]
gi|147675270|ref|YP_001218298.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|153818935|ref|ZP_01971602.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457]
gi|153822325|ref|ZP_01974992.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|227080356|ref|YP_002808907.1| porphobilinogen deaminase [Vibrio cholerae M66-2]
gi|229508398|ref|ZP_04397902.1| porphobilinogen deaminase [Vibrio cholerae BX 330286]
gi|229508921|ref|ZP_04398411.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|229517035|ref|ZP_04406481.1| porphobilinogen deaminase [Vibrio cholerae RC9]
gi|229606671|ref|YP_002877319.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236]
gi|254851504|ref|ZP_05240854.1| porphobilinogen deaminase [Vibrio cholerae MO10]
gi|298501111|ref|ZP_07010911.1| porphobilinogen deaminase [Vibrio cholerae MAK 757]
gi|9654520|gb|AAF93298.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121548017|gb|EAX58095.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121629433|gb|EAX61862.1| porphobilinogen deaminase [Vibrio cholerae V52]
gi|126510497|gb|EAZ73091.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457]
gi|126520151|gb|EAZ77374.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|146317153|gb|ABQ21692.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|227008244|gb|ACP04456.1| porphobilinogen deaminase [Vibrio cholerae M66-2]
gi|227011878|gb|ACP08088.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|229346098|gb|EEO11070.1| porphobilinogen deaminase [Vibrio cholerae RC9]
gi|229354038|gb|EEO18971.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|229354671|gb|EEO19593.1| porphobilinogen deaminase [Vibrio cholerae BX 330286]
gi|229369326|gb|ACQ59749.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236]
gi|254847209|gb|EET25623.1| porphobilinogen deaminase [Vibrio cholerae MO10]
gi|297540145|gb|EFH76206.1| porphobilinogen deaminase [Vibrio cholerae MAK 757]
Length = 317
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|238892405|ref|YP_002917139.1| porphobilinogen deaminase [Klebsiella pneumoniae NTUH-K2044]
gi|329997497|ref|ZP_08302799.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3]
gi|238544721|dbj|BAH61072.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328539065|gb|EGF65104.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3]
Length = 318
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A K L+ +V A DG R G A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|238760184|ref|ZP_04621331.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236]
gi|238701620|gb|EEP94190.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236]
Length = 313
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSHFAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLVIRDLRGNVGTRLAKLDKGEYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPVANAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|152972793|ref|YP_001337939.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|166217775|sp|A6TGI8|HEM3_KLEP7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150957642|gb|ABR79672.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 313
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ +
Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A K L+ +V A DG R G A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|229525016|ref|ZP_04414421.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426]
gi|229338597|gb|EEO03614.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426]
Length = 317
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|258623142|ref|ZP_05718154.1| porphobilinogen deaminase [Vibrio mimicus VM573]
gi|258584625|gb|EEW09362.1| porphobilinogen deaminase [Vibrio mimicus VM573]
Length = 326
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 16 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D
Sbjct: 74 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 134 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L
Sbjct: 194 LESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V DG G R +A +G A+ +
Sbjct: 254 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 313
Query: 301 NKNVFN 306
K +
Sbjct: 314 AKEILE 319
>gi|163748699|ref|ZP_02155952.1| porphobilinogen deaminase [Shewanella benthica KT99]
gi|161331809|gb|EDQ02613.1| porphobilinogen deaminase [Shewanella benthica KT99]
Length = 309
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ +S+ D
Sbjct: 59 KGLFVKELEVAILEDRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIGD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ +ID RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRGMRPDLKIIDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ ED P+ GQGA+ IE +N + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISTEDSLPANGQGAVGIECRTDNERVKALLAPLEHAETRFRVTAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G TL G+V DG + G + DA IG A+ +
Sbjct: 239 EGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTCVGPKTDAKAIGIALAEELLGKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKEILD 304
>gi|229515846|ref|ZP_04405304.1| porphobilinogen deaminase [Vibrio cholerae TMA 21]
gi|229527138|ref|ZP_04416532.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)]
gi|229335369|gb|EEO00852.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)]
gi|229347109|gb|EEO12070.1| porphobilinogen deaminase [Vibrio cholerae TMA 21]
Length = 317
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|254473214|ref|ZP_05086612.1| porphobilinogen deaminase [Pseudovibrio sp. JE062]
gi|211957935|gb|EEA93137.1| porphobilinogen deaminase [Pseudovibrio sp. JE062]
Length = 307
Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 136/306 (44%), Positives = 195/306 (63%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KP RIGTR S LALA A ETR+ L H + + I+ + T GD+I +R L+E GG
Sbjct: 1 MQTKPIRIGTRGSALALAQAHETRARLAKAHGLTDDDFEIVVIKTTGDQIQDRPLSEAGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+ ID AVHS+KDMPT L GL ++AYLPRED+RD FIS + L D
Sbjct: 61 KGLFTKEIEEALLDKSIDLAVHSSKDMPTVLPDGLGMTAYLPREDVRDAFISPKVEKLTD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A + R R D+ V+ +RG ++TRL KL+ A LAYAG++RL
Sbjct: 121 LPQGAVVGSSSLRRQAQIKRLRPDLDVVMYRGNLQTRLRKLDEGVVDATFLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ ++++E F P+ GQGAI IE + + + ++ I+H +T + ERA+LAE+
Sbjct: 181 QGDLVTSLMDLEHFLPAVGQGAIGIEARLGDEETARILAPIHHAETESRLLLERAYLAEM 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG ++ +G + F G V+ DG H V G DA IGR+ + ++ S
Sbjct: 241 DGSCRTPIAGLSHVEGDRIKFRGEVIKPDGSQTHTVEGEGPVSDAEEIGRELGKELKAKS 300
Query: 301 NKNVFN 306
N
Sbjct: 301 GPNFLE 306
>gi|21957067|gb|AAM83970.1|AE013638_8 porphobilinogen deaminase; hydroxymethylbilane synthase [Yersinia
pestis KIM 10]
gi|45437816|gb|AAS63365.1| porphobilinogen deaminase [Yersinia pestis biovar Microtus str.
91001]
Length = 369
Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 57 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 114
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 115 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 174
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 175 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 234
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 235 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 294
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A +
Sbjct: 295 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 354
Query: 301 NKNVF 305
+ +
Sbjct: 355 AREIL 359
>gi|297581838|ref|ZP_06943759.1| porphobilinogen deaminase [Vibrio cholerae RC385]
gi|297533932|gb|EFH72772.1| porphobilinogen deaminase [Vibrio cholerae RC385]
Length = 317
Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L RSD+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARSDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G+T++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|153826278|ref|ZP_01978945.1| porphobilinogen deaminase [Vibrio cholerae MZO-2]
gi|149739946|gb|EDM54125.1| porphobilinogen deaminase [Vibrio cholerae MZO-2]
Length = 311
Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 179 LESRIRSFIEPEQSLPAVGQGALGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 AKEILE 304
>gi|156935870|ref|YP_001439786.1| porphobilinogen deaminase [Cronobacter sakazakii ATCC BAA-894]
gi|166217766|sp|A7MQJ1|HEM3_ENTS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|156534124|gb|ABU78950.1| hypothetical protein ESA_03753 [Cronobacter sakazakii ATCC BAA-894]
Length = 313
Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL +
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ S++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+
Sbjct: 119 MPAGSIVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L
Sbjct: 179 LDARITSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + L+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELRDGELWLRALVGAPDGSRIVRGERRGAPEDARQLGISLAEELLNHG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|238784737|ref|ZP_04628740.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970]
gi|238714333|gb|EEQ06342.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970]
Length = 313
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S + L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSSYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + +E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPVEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDVLWLRALVGAPDGSEIIRGERRGPANNAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|238789375|ref|ZP_04633161.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641]
gi|238722518|gb|EEQ14172.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641]
Length = 313
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQDLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSPNYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRSAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ +V A DG R G A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDILWLRALVGAPDGSEIIRGERRGPAQHAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|262040885|ref|ZP_06014111.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041774|gb|EEW42819.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 318
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + + L + R+D RD F+S+ S+ +
Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPECLGLVTICERDDPRDAFVSNRYASIDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L
Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A K L+ +V A DG R G A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|324111028|gb|EGC05015.1| porphobilinogen deaminase [Escherichia fergusonii B253]
gi|325499227|gb|EGC97086.1| porphobilinogen deaminase [Escherichia fergusonii ECD227]
Length = 313
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G ++ +V A DG R G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|218550973|ref|YP_002384764.1| porphobilinogen deaminase [Escherichia fergusonii ATCC 35469]
gi|226740637|sp|B7LU53|HEM3_ESCF3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218358514|emb|CAQ91161.1| hydroxymethylbilane synthase [Escherichia fergusonii ATCC 35469]
Length = 313
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G ++ +V A DG R G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|170724850|ref|YP_001758876.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908]
gi|238059003|sp|B1KQC6|HEM3_SHEWM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169810197|gb|ACA84781.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908]
Length = 309
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PDLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPKGAVVGTSSLRRQCQIRAARPDLQIRDLRGNVGTRLGKLDAGTYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHAETRFRVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A TL G+V DG ++ G + DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIVDDTLTLRGLVGNPDGTQIIASTKVGPKTDAKALGISLAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|157960202|ref|YP_001500236.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345]
gi|189028157|sp|A8GZG4|HEM3_SHEPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157845202|gb|ABV85701.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345]
Length = 310
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++++D
Sbjct: 59 KGLFVKELEVAMLEGLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL G+V DG S +G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITASSSGSTADAEKLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|292486675|ref|YP_003529545.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430]
gi|292897912|ref|YP_003537281.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946]
gi|291197760|emb|CBJ44855.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946]
gi|291552092|emb|CBA19129.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430]
gi|312170741|emb|CBX79003.1| Porphobilinogen deaminase [Erwinia amylovora ATCC BAA-2158]
Length = 313
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 173/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PRLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++SG D AVHS KD+P +GL + A R+D D F+S+ S+
Sbjct: 59 KGLFVKELENAMLSGHADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNHYASVDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPAGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++++ E+ P+ GQGA+ IE +++ + L+ +NH+DT V+ ERA L
Sbjct: 179 LSGRIRQVMPAEESLPAVGQGAVGIECRLDDMRTIGLLAALNHDDTACRVSAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ G+V + DG R G+R DA +G A+ +
Sbjct: 239 EGGCQVPIGSYALLEGDRLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|123440582|ref|YP_001004576.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332159812|ref|YP_004296389.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|158512667|sp|A1JI86|HEM3_YERE8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|122087543|emb|CAL10324.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607646|emb|CBY29144.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664042|gb|ADZ40686.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862558|emb|CBX72712.1| porphobilinogen deaminase [Yersinia enterocolitica W22703]
Length = 313
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDNFTRQLLAPLNHRETELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|261250035|ref|ZP_05942612.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891]
gi|260939539|gb|EEX95524.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891]
Length = 312
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 173/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALKAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++GT SLRR+ L +R D+ + + RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 119 ELPQGAIVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDDGQYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA
Sbjct: 179 ELEERIKSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKETADRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG G+R DA +G + A +
Sbjct: 239 LEGGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIIRGEIRGSRADAETLGVELANQLLDD 298
Query: 300 SNKNVF 305
K +
Sbjct: 299 GAKEIL 304
>gi|27364543|ref|NP_760071.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6]
gi|37678265|ref|NP_932874.1| porphobilinogen deaminase [Vibrio vulnificus YJ016]
gi|33301181|sp|Q8DD85|HEM3_VIBVU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|55976475|sp|Q7MQC7|HEM3_VIBVY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|27360662|gb|AAO09598.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6]
gi|37197004|dbj|BAC92845.1| porphobilinogen deaminase [Vibrio vulnificus YJ016]
Length = 312
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+
Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A +G ++ +V DG G R A +G A + + +
Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREI 303
Query: 305 F 305
Sbjct: 304 L 304
>gi|320154944|ref|YP_004187323.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O]
gi|319930256|gb|ADV85120.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O]
Length = 312
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF
Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+
Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C
Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHTDTADRVKCERAMNLTLEGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A +G ++ +V DG G R A +G A + + +
Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREI 303
Query: 305 F 305
Sbjct: 304 L 304
>gi|145300736|ref|YP_001143577.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142853508|gb|ABO91829.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 315
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG
Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++
Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFSQIEA 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L
Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHTLLAPLEHAETRIRVLTERAMNRAL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ G+V + DG G D +G AQ +
Sbjct: 245 QGGCQVPIGAYALVQGDEVWLRGLVGSPDGSQVIHDEIRGPLADGEALGHTLAQRLLAAG 304
Query: 301 NKNVF 305
+
Sbjct: 305 ADVIL 309
>gi|114561627|ref|YP_749140.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400]
gi|122300909|sp|Q088L3|HEM3_SHEFN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114332920|gb|ABI70302.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400]
Length = 309
Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L +IGG
Sbjct: 1 MSENIIRIATRKSPLAMWQAEFVKAELERIH--PGLTVELLPMSTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDLPVEFPEGLGLQVICEREDPRDAFVSNNYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LNERIANFISAEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G L G+V DG + +G++ DA+ +G A+ +
Sbjct: 239 EGGCQVPIGAFAEINGDNLTLRGLVGNPDGSQIIIGTVSGSKTDAVALGESLAEDLLSRG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|260596029|ref|YP_003208600.1| porphobilinogen deaminase [Cronobacter turicensis z3032]
gi|260215206|emb|CBA27057.1| Porphobilinogen deaminase [Cronobacter turicensis z3032]
Length = 313
Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL +
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYKSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ S++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+
Sbjct: 119 MPAGSIVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L
Sbjct: 179 LDARITSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A K L+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSRIVRGERRGAPQDASQLGVSLAEELLNHG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|157377265|ref|YP_001475865.1| porphobilinogen deaminase [Shewanella sediminis HAW-EB3]
gi|189028158|sp|A8G0W4|HEM3_SHESH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157319639|gb|ABV38737.1| Hydroxymethylbilane synthase [Shewanella sediminis HAW-EB3]
Length = 309
Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRASRPDLVIRDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRINDERVKALLAPLEHTETRHRVIAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TL G+V DG E ++ G++ DA IG A+ +
Sbjct: 239 EGGCQVPIGAYAEIQDDTLTLRGLVGNPDGSHIIEATKVGSKTDAQAIGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKAILD 304
>gi|148978777|ref|ZP_01815157.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3]
gi|145962198|gb|EDK27482.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3]
Length = 326
Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G
Sbjct: 15 MTNSAPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 72
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 73 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNID 132
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 133 ELPQGAVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRL 192
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA
Sbjct: 193 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLT 252
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG +G R DA +G A +
Sbjct: 253 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGPRKDAEALGVTLANQLLDD 312
Query: 300 SNKNVF 305
+ +
Sbjct: 313 GAREIL 318
>gi|322834934|ref|YP_004214961.1| porphobilinogen deaminase [Rahnella sp. Y9602]
gi|321170135|gb|ADW75834.1| porphobilinogen deaminase [Rahnella sp. Y9602]
Length = 313
Score = 288 bits (736), Expect = 8e-76, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A +S LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAQYVQSRLMACH--PGLQVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYASLAD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGSIVGTSSLRRQCQLRQKRPDLMIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L E+ P+ GQGA+ IE +++ ++L+ + H +T V ERA L
Sbjct: 179 LENRITYALTPEECLPAVGQGAVGIECRLDDQTTRDLLAPLAHRETTLRVQAERAMNMRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L+ +V A DG R G +A +G D A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDELWLRALVGAPDGSQMVCGERRGPAANAHRMGVDLAEELLANG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|127511252|ref|YP_001092449.1| porphobilinogen deaminase [Shewanella loihica PV-4]
gi|126636547|gb|ABO22190.1| porphobilinogen deaminase [Shewanella loihica PV-4]
Length = 317
Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L H+ + ++P+STKGD I + L ++GG
Sbjct: 9 MSQNVIRIATRKSPLAMWQAEFVKAELEKAHE--GLVVELLPMSTKGDVILDTPLAKVGG 66
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ D AVHS KD+P +GL + RED RD F+S+T +++++
Sbjct: 67 KGLFVKELEVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEE 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 127 LPQGAIVGTSSLRRQCQIRAARPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++ ED P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 187 LEDRIASFISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAMNTRL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL G+V DG + +G + DA +G A +
Sbjct: 247 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQVIRGTTSGAKQDAEQLGIALADELLSKG 306
Query: 301 NKNVFN 306
K + +
Sbjct: 307 AKAILD 312
>gi|229520088|ref|ZP_04409516.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80]
gi|229342876|gb|EEO07866.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80]
Length = 317
Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDAILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|323495298|ref|ZP_08100379.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546]
gi|323310475|gb|EGA63658.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546]
Length = 312
Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQTTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNSID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ + R D+ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQIKEARPDLIIKELRGNVGTRLGKLDAGDYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA
Sbjct: 179 ELEERIKSFIEPEQSLPAVGQGAVGIECRLDDDRLIKLLEPLNHKETADRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG G+R DA +G + A +
Sbjct: 239 LEGGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIVRGEIRGSRTDAEALGVELANQLLAD 298
Query: 300 SNKNVF 305
K +
Sbjct: 299 GAKEIL 304
>gi|149191476|ref|ZP_01869725.1| porphobilinogen deaminase [Vibrio shilonii AK1]
gi|148834664|gb|EDL51652.1| porphobilinogen deaminase [Vibrio shilonii AK1]
Length = 329
Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats.
Identities = 111/307 (36%), Positives = 171/307 (55%), Gaps = 3/307 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + +P RI TR SPLAL A + +L+ H P + ++ + TKGD I + L ++G
Sbjct: 18 MTQTQPIRIATRKSPLALWQAHYVKDALIAAH--PGLEVELVTMVTKGDIILDTPLAKVG 75
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 76 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYTNIS 135
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L R D+ + + RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 136 ELPQGAVVGTCSLRRQCQLKEQRPDLVIKELRGNVGTRLGKLDNGEYDAIILAAAGLKRL 195
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E I+ + E+ P+ GQGA+ IE +++ + +L++ +NH +T D V CERA
Sbjct: 196 ELESRIRSFIEPEESLPAVGQGAVGIECRLDDERLIKLLEPLNHTNTADRVLCERAMNLT 255
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG G R DA +G A +
Sbjct: 256 LEGGCQVPIGSYSLIDGDEIWLRALVGEPDGSKIVRGEIRGKRADAEALGVQLANQLLND 315
Query: 300 SNKNVFN 306
K +
Sbjct: 316 GAKEILE 322
>gi|51594540|ref|YP_068731.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953]
gi|186893538|ref|YP_001870650.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+]
gi|61213379|sp|Q66G00|HEM3_YERPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059007|sp|B2K065|HEM3_YERPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51587822|emb|CAH19424.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953]
gi|186696564|gb|ACC87193.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+]
Length = 313
Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + A RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LETRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|254226598|ref|ZP_04920179.1| porphobilinogen deaminase [Vibrio cholerae V51]
gi|125620870|gb|EAZ49223.1| porphobilinogen deaminase [Vibrio cholerae V51]
Length = 317
Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG
Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D
Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+
Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L
Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLTPLNHADTADRVRCERAMNLTL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V DG G R A +G A+ +
Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304
Query: 301 NKNVFN 306
K +
Sbjct: 305 AKEILE 310
>gi|269961540|ref|ZP_06175903.1| porphobilinogen deaminase [Vibrio harveyi 1DA3]
gi|269833769|gb|EEZ87865.1| porphobilinogen deaminase [Vibrio harveyi 1DA3]
Length = 312
Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAHYVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA
Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG + G+R DA +G A +
Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLEN 298
Query: 300 SNKNVF 305
+++
Sbjct: 299 GARDIL 304
>gi|251787830|ref|YP_003002551.1| porphobilinogen deaminase [Dickeya zeae Ech1591]
gi|247536451|gb|ACT05072.1| porphobilinogen deaminase [Dickeya zeae Ech1591]
Length = 322
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L D H P + ++P+ T+GD + + L ++GG
Sbjct: 11 MVDTILRIATRQSPLALWQAHFVKQRLEDCH--PGLQVELVPMVTRGDVLLDTPLAKVGG 68
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L D
Sbjct: 69 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYATLDD 128
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ L +R D+ V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 129 LPEGACVGTSSLRRQCQLRAYRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 188
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L+ E P+ GQGA+ +E +++ + + L+ +NHEDT V ERA L
Sbjct: 189 LAHRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHEDTATRVLAERAMNTRL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TLY +V A DG R G+R DA +G A +
Sbjct: 249 EGGCQVPIGSYAELQDETLYLRALVGAPDGSRIIYAERRGSRQDAETLGIALADELLERG 308
Query: 301 NKNVF 305
+++
Sbjct: 309 ARDIL 313
>gi|238798585|ref|ZP_04642061.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969]
gi|238717541|gb|EEQ09381.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969]
Length = 313
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L
Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDVTRQLLAPLNHRDTELRVCAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G L+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELAGGELWLRALVGAPDGSEIIRGERRGPAENAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|167625822|ref|YP_001676116.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4]
gi|189028156|sp|B0TJ54|HEM3_SHEHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167355844|gb|ABZ78457.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4]
Length = 310
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 175/306 (57%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG
Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ D AVHS KD+P + +GL + RED RD F+S+T ++++D
Sbjct: 59 KGLFVKELEVAMLEGKADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK
Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL G+V DG + +GN+ DA +G A+ +
Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|153835503|ref|ZP_01988170.1| porphobilinogen deaminase [Vibrio harveyi HY01]
gi|156972662|ref|YP_001443569.1| porphobilinogen deaminase [Vibrio harveyi ATCC BAA-1116]
gi|166217790|sp|A7MXU9|HEM3_VIBHB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148867929|gb|EDL67139.1| porphobilinogen deaminase [Vibrio harveyi HY01]
gi|156524256|gb|ABU69342.1| hypothetical protein VIBHAR_00314 [Vibrio harveyi ATCC BAA-1116]
Length = 312
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA
Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG + G+R DA +G A +
Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLEN 298
Query: 300 SNKNVF 305
+++
Sbjct: 299 GARDIL 304
>gi|109896672|ref|YP_659927.1| porphobilinogen deaminase [Pseudoalteromonas atlantica T6c]
gi|123065108|sp|Q15Z15|HEM3_PSEA6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|109698953|gb|ABG38873.1| hydroxymethylbilane synthase [Pseudoalteromonas atlantica T6c]
Length = 309
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 176/305 (57%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG
Sbjct: 1 MSDRVIRIATRKSALAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T S+++
Sbjct: 59 KGLFIKELEVAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+++ D RG + TRL KL++ + AI+LA AG+ RL+
Sbjct: 119 LPQGAIVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDDGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L
Sbjct: 179 MQDRIKTYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAERAMNAKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G LY G+V + DG + + + GN DA++IG D A+ +
Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVDVAEQLLEKG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AGDIL 303
>gi|108806170|ref|YP_650086.1| porphobilinogen deaminase [Yersinia pestis Antiqua]
gi|108810280|ref|YP_646047.1| porphobilinogen deaminase [Yersinia pestis Nepal516]
gi|145600717|ref|YP_001164793.1| porphobilinogen deaminase [Yersinia pestis Pestoides F]
gi|153949991|ref|YP_001399195.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758]
gi|153997095|ref|ZP_02022228.1| porphobilinogen deaminase [Yersinia pestis CA88-4125]
gi|161484901|ref|NP_667719.2| porphobilinogen deaminase [Yersinia pestis KIM 10]
gi|161511325|ref|NP_994488.2| porphobilinogen deaminase [Yersinia pestis biovar Microtus str.
91001]
gi|165926233|ref|ZP_02222065.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939151|ref|ZP_02227702.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011678|ref|ZP_02232576.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213633|ref|ZP_02239668.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401822|ref|ZP_02307310.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421084|ref|ZP_02312837.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426299|ref|ZP_02318052.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470637|ref|ZP_02335341.1| porphobilinogen deaminase [Yersinia pestis FV-1]
gi|218930852|ref|YP_002348727.1| porphobilinogen deaminase [Yersinia pestis CO92]
gi|229837182|ref|ZP_04457347.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A]
gi|229839542|ref|ZP_04459701.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229900105|ref|ZP_04515242.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900449|ref|ZP_04515578.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|270488804|ref|ZP_06205878.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27]
gi|294505512|ref|YP_003569574.1| porphobilinogen deaminase [Yersinia pestis Z176003]
gi|17380441|sp|P46355|HEM3_YERPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|122979815|sp|Q1CBN1|HEM3_YERPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123373560|sp|Q1CNI3|HEM3_YERPN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158514109|sp|A4TRA8|HEM3_YERPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167008820|sp|A7FD67|HEM3_YERP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108773928|gb|ABG16447.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|108778083|gb|ABG12141.1| hydroxymethylbilane synthase [Yersinia pestis Antiqua]
gi|115349463|emb|CAL22436.1| porphobilinogen deaminase [Yersinia pestis CO92]
gi|145212413|gb|ABP41820.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides F]
gi|149289401|gb|EDM39479.1| porphobilinogen deaminase [Yersinia pestis CA88-4125]
gi|152961486|gb|ABS48947.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758]
gi|165912924|gb|EDR31550.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921757|gb|EDR38954.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989447|gb|EDR41748.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205306|gb|EDR49786.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961213|gb|EDR57234.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048715|gb|EDR60123.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054818|gb|EDR64622.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682468|gb|EEO78555.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516]
gi|229686885|gb|EEO78964.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695908|gb|EEO85955.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706125|gb|EEO92134.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A]
gi|262363578|gb|ACY60299.1| porphobilinogen deaminase [Yersinia pestis D106004]
gi|262367506|gb|ACY64063.1| porphobilinogen deaminase [Yersinia pestis D182038]
gi|270337308|gb|EFA48085.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27]
gi|294355971|gb|ADE66312.1| porphobilinogen deaminase [Yersinia pestis Z176003]
gi|320013550|gb|ADV97121.1| hydroxymethylbilane synthase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 313
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|254490211|ref|ZP_05103401.1| porphobilinogen deaminase [Methylophaga thiooxidans DMS010]
gi|224464558|gb|EEF80817.1| porphobilinogen deaminase [Methylophaga thiooxydans DMS010]
Length = 309
Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR SPLA+ A + SL+ +H P + ++ + T+GD I + L ++GG
Sbjct: 1 MSKRTVRIATRNSPLAVWQAEFVKDSLLALH--PDLTVELVKMKTQGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED D F+S+ Q++ D
Sbjct: 59 KGLFVKELEQGMLDGRADIAVHSMKDVPVEFPEGLHLPVICKREDPHDAFVSNHYQTIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ R D+ V+ RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPHGARLGTSSLRRECQARTHRPDLEVLPLRGNVNTRLRKLDEGQFDAIILAMAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IET +++ + L+ ++ T + ERA L
Sbjct: 179 FDDRIRSALTPEQSLPAIGQGALGIETRIDDDEMNALIAPLHCPQTAIVLTAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A +G ++ G+V DG G DA +G A+ +
Sbjct: 239 SGGCQVPIAGYAMLEGDEVWLRGLVGRPDGTNTLYADVRGAAKDADKLGVQIAETLLTKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|307942602|ref|ZP_07657950.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4]
gi|307774241|gb|EFO33454.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4]
Length = 307
Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 142/305 (46%), Positives = 197/305 (64%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RIGTR S LALA A ETR LM H +P I+ + T GD+I +R L+E+GG
Sbjct: 1 MQSTLLRIGTRGSQLALAQAHETRDRLMAAHGLPEDAFEIVVVKTSGDQIQDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE L+ G +D AVHS+KDMPT L GL I+A+LPRED+RD FIS A++L+D
Sbjct: 61 KGLFTKEIEDMLLDGSLDLAVHSSKDMPTVLPAGLDITAFLPREDVRDAFISPKAKTLRD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL+ A LLA+AG+KRL
Sbjct: 121 LPHGAVVGSSSLRRQAMVKRLRPDIDVVMYRGNVQTRLRKLDEGVVDATLLAHAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ ++ +DF P+ GQGAIC+E+ +++ K L+ IN +T + ERAFL L
Sbjct: 181 LGDVVTSVIEADDFVPAVGQGAICLESRLDDEKTNGLLSAINDPETRVRLEAERAFLGVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG+C++ I G A G TL G++L DG HEV +G+ DA IG A + ++ +
Sbjct: 241 DGTCRTPIGGLATVDGDTLTLKGVILKPDGSQMHEVEHSGSVQDAEAIGLAAGEELKSKA 300
Query: 301 NKNVF 305
N
Sbjct: 301 GPNFL 305
>gi|162419364|ref|YP_001605129.1| porphobilinogen deaminase [Yersinia pestis Angola]
gi|238059008|sp|A9R8K0|HEM3_YERPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|162352179|gb|ABX86127.1| porphobilinogen deaminase [Yersinia pestis Angola]
Length = 313
Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A + +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSLG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|312884198|ref|ZP_07743909.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368126|gb|EFP95667.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 312
Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ P RI TR SPLAL A + +L+ H P + +I + TKGD I + L ++GGK
Sbjct: 3 KSTPIRIATRKSPLALWQANYVKEALIKAH--PGLQVELITMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+ Q++ L
Sbjct: 61 GLFVKELENAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNHYQNIDAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++++GT SLRR+ + +R D+ V + RG + TRLNKL+ + AI+LA AG+KRL
Sbjct: 121 PNNAIVGTCSLRRQCQIKEYRPDLIVKELRGNVGTRLNKLDAGEYDAIILAAAGLKRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I L E P+ GQGA+ IE +++ + +L+ +N DT D V CERA L+
Sbjct: 181 ESRIASFLEPEQSLPAVGQGAVGIECRLDDQRLIDLLAPLNDRDTNDRVKCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ +G ++ +V DG G R DA +G + A +
Sbjct: 241 GGCQVPIGSYSVLEGEQIWLRALVGEPDGSQMVRGEIRGKRDDAEQLGIELANQLLDKGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|332304814|ref|YP_004432665.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172143|gb|AEE21397.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 309
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 174/305 (57%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG
Sbjct: 1 MSDRVIRIATRKSTLAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T ++++
Sbjct: 59 KGLFIKELEIAMSEGRADIAVHSMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+++ D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L
Sbjct: 179 MQERIKAYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G LY G+V + DG + + + G+ DA +IG D A+ +
Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSLLLQAEKRGSINDAQSIGIDVAEQLLEKG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AGDIL 303
>gi|194438640|ref|ZP_03070728.1| porphobilinogen deaminase [Escherichia coli 101-1]
gi|194422444|gb|EDX38443.1| porphobilinogen deaminase [Escherichia coli 101-1]
Length = 318
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|254163746|ref|YP_003046854.1| porphobilinogen deaminase [Escherichia coli B str. REL606]
gi|242379335|emb|CAQ34146.1| hydroxymethylbilane synthase [Escherichia coli BL21(DE3)]
gi|253975647|gb|ACT41318.1| porphobilinogen deaminase [Escherichia coli B str. REL606]
gi|253979803|gb|ACT45473.1| porphobilinogen deaminase [Escherichia coli BL21(DE3)]
gi|323959059|gb|EGB54728.1| porphobilinogen deaminase [Escherichia coli H489]
gi|323969355|gb|EGB64654.1| porphobilinogen deaminase [Escherichia coli TA007]
Length = 313
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|271502386|ref|YP_003335412.1| porphobilinogen deaminase [Dickeya dadantii Ech586]
gi|270345941|gb|ACZ78706.1| porphobilinogen deaminase [Dickeya dadantii Ech586]
Length = 312
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG
Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L D
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNNYATLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPEGACVGTSSLRRQCQLRAHRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L
Sbjct: 179 LENRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TLY +V A DG R G R DA +G A +
Sbjct: 239 EGGCQVPIGSYAELQDDTLYLRALVGAPDGSRIIYAERRGPRQDAEALGIGLADELLERG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|253690341|ref|YP_003019531.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259646261|sp|C6DHC2|HEM3_PECCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|251756919|gb|ACT14995.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 313
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 119/305 (39%), Positives = 170/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGAI IE +N+ + ++L+ +NH T V ERA L
Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R GN DA IG A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIGIALAEELLAKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ASAIL 303
>gi|163803631|ref|ZP_02197496.1| porphobilinogen deaminase [Vibrio sp. AND4]
gi|159172579|gb|EDP57439.1| porphobilinogen deaminase [Vibrio sp. AND4]
Length = 312
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALQSAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPIDFPDGLGLVTICEREDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 DLPQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ I+ + E P+ GQGA+ IE +++ + ++L++ +NH DT D V CERA
Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRIDDERLRKLLEPLNHRDTADRVRCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG + +G+R DA +G A +
Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIHGHRNDAEALGVQLANELLAN 298
Query: 300 SNKNVF 305
+++
Sbjct: 299 GARDIL 304
>gi|157833452|pdb|1PDA|A Chain A, Structure Of Porphobilinogen Deaminase Reveals A Flexible
Multidomain Polymerase With A Single Catalytic Site
gi|41664|emb|CAA27813.1| unnamed protein product [Escherichia coli]
Length = 313
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G+C+ I +A ++ G+V A DG R G DA +G A+ +
Sbjct: 239 EGACQVPIGSYAELIDGEIWLRGLVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|328472411|gb|EGF43277.1| porphobilinogen deaminase [Vibrio parahaemolyticus 10329]
Length = 312
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA
Sbjct: 179 KLEDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +A +G ++ +V DG G+R D +G A +
Sbjct: 239 LEGGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDN 298
Query: 300 SNKNVF 305
+++
Sbjct: 299 GARDIL 304
>gi|28899762|ref|NP_799367.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|153838754|ref|ZP_01991421.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810]
gi|260365170|ref|ZP_05777735.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030]
gi|260878130|ref|ZP_05890485.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034]
gi|260895813|ref|ZP_05904309.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466]
gi|260900854|ref|ZP_05909249.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037]
gi|32363175|sp|Q87KI9|HEM3_VIBPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28808014|dbj|BAC61251.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|149747840|gb|EDM58724.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810]
gi|308087192|gb|EFO36887.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466]
gi|308092784|gb|EFO42479.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034]
gi|308110595|gb|EFO48135.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037]
gi|308111033|gb|EFO48573.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030]
Length = 312
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNIN 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA
Sbjct: 179 KLEDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +A +G ++ +V DG G+R D +G A +
Sbjct: 239 LEGGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDS 298
Query: 300 SNKNVF 305
+++
Sbjct: 299 GARDIL 304
>gi|170026227|ref|YP_001722732.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII]
gi|238059009|sp|B1JPE6|HEM3_YERPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169752761|gb|ACA70279.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII]
Length = 313
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYTHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDGHTRQLLAPLNHRHTELRVCAERAMNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G +A +G + A +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|218701284|ref|YP_002408913.1| porphobilinogen deaminase [Escherichia coli IAI39]
gi|226740634|sp|B7NTE0|HEM3_ECO7I RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218371270|emb|CAR19104.1| hydroxymethylbilane synthase [Escherichia coli IAI39]
Length = 313
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|170680193|ref|YP_001746121.1| porphobilinogen deaminase [Escherichia coli SMS-3-5]
gi|170517911|gb|ACB16089.1| porphobilinogen deaminase [Escherichia coli SMS-3-5]
Length = 318
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|307140503|ref|ZP_07499859.1| porphobilinogen deaminase [Escherichia coli H736]
Length = 318
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|323964049|gb|EGB59539.1| porphobilinogen deaminase [Escherichia coli M863]
gi|327250654|gb|EGE62360.1| porphobilinogen deaminase [Escherichia coli STEC_7v]
Length = 313
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLNDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|49176416|ref|YP_026260.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|89110215|ref|AP_003995.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
W3110]
gi|170083288|ref|YP_001732608.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238902882|ref|YP_002928678.1| hydroxymethylbilane synthase [Escherichia coli BW2952]
gi|256026151|ref|ZP_05440016.1| porphobilinogen deaminase [Escherichia sp. 4_1_40B]
gi|312971913|ref|ZP_07786087.1| porphobilinogen deaminase [Escherichia coli 1827-70]
gi|2506504|sp|P06983|HEM3_ECOLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229836108|sp|B1XAH2|HEM3_ECODH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|259647795|sp|C4ZZ69|HEM3_ECOBW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4388845|pdb|2YPN|A Chain A, Hydroxymethylbilane Synthase
gi|28373294|pdb|1GTK|A Chain A, Time-Resolved And Static-Ensemble Structural Chemistry Of
Hydroxymethylbilane Synthase
gi|41666|emb|CAA31132.1| unnamed protein product [Escherichia coli]
gi|48994974|gb|AAT48218.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|85676246|dbj|BAE77496.1| hydroxymethylbilane synthase [Escherichia coli str. K12 substr.
W3110]
gi|169891123|gb|ACB04830.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238861470|gb|ACR63468.1| hydroxymethylbilane synthase [Escherichia coli BW2952]
gi|309704240|emb|CBJ03588.1| porphobilinogen deaminase [Escherichia coli ETEC H10407]
gi|310334290|gb|EFQ00495.1| porphobilinogen deaminase [Escherichia coli 1827-70]
gi|315618498|gb|EFU99084.1| porphobilinogen deaminase [Escherichia coli 3431]
gi|323934193|gb|EGB30624.1| porphobilinogen deaminase [Escherichia coli E1520]
gi|323938941|gb|EGB35160.1| porphobilinogen deaminase [Escherichia coli E482]
gi|332345783|gb|AEE59117.1| porphobilinogen deaminase HemC [Escherichia coli UMNK88]
Length = 313
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|320197614|gb|EFW72226.1| Porphobilinogen deaminase [Escherichia coli WV_060327]
Length = 318
Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|187776117|ref|ZP_02800653.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196]
gi|188025006|ref|ZP_02775407.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113]
gi|189010242|ref|ZP_02805709.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076]
gi|189401833|ref|ZP_02778707.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401]
gi|189403100|ref|ZP_02793091.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486]
gi|189404376|ref|ZP_02788935.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501]
gi|189404861|ref|ZP_02811648.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869]
gi|208806069|ref|ZP_03248406.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206]
gi|208812922|ref|ZP_03254251.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045]
gi|208819553|ref|ZP_03259873.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042]
gi|209396873|ref|YP_002273321.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115]
gi|217324566|ref|ZP_03440650.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588]
gi|261225578|ref|ZP_05939859.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK2000]
gi|261255624|ref|ZP_05948157.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK966]
gi|187768841|gb|EDU32685.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196]
gi|188015439|gb|EDU53561.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113]
gi|189001539|gb|EDU70525.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076]
gi|189359021|gb|EDU77440.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401]
gi|189362764|gb|EDU81183.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486]
gi|189365984|gb|EDU84400.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501]
gi|189373238|gb|EDU91654.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869]
gi|208725870|gb|EDZ75471.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206]
gi|208734199|gb|EDZ82886.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045]
gi|208739676|gb|EDZ87358.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042]
gi|209158273|gb|ACI35706.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115]
gi|217320787|gb|EEC29211.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588]
gi|320191103|gb|EFW65753.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. EC1212]
gi|320666093|gb|EFX33107.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. LSU-61]
gi|326344260|gb|EGD68020.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1125]
gi|326347912|gb|EGD71626.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1044]
Length = 318
Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|227114730|ref|ZP_03828386.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 313
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L+ E+ P+ GQGAI IE +++ + L+ +NH T V ERA L
Sbjct: 179 LEARIRCALSPEESLPAVGQGAIGIECRLDDEHVRHLLAPLNHPATAARVLAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R GN DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGNVSDAEQLGIALAEELLAKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ASAIL 303
>gi|168801133|ref|ZP_02826140.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508]
gi|195938092|ref|ZP_03083474.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4024]
gi|218707439|ref|YP_002414958.1| porphobilinogen deaminase [Escherichia coli UMN026]
gi|254795801|ref|YP_003080638.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14359]
gi|293413246|ref|ZP_06655908.1| porphobilinogen deaminase [Escherichia coli B354]
gi|298383172|ref|ZP_06992766.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302]
gi|331665450|ref|ZP_08366349.1| hydroxymethylbilane synthase [Escherichia coli TA143]
gi|23821693|sp|Q8XAP3|HEM3_ECO57 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740636|sp|B7NFA7|HEM3_ECOLU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189376679|gb|EDU95095.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508]
gi|218434536|emb|CAR15462.1| hydroxymethylbilane synthase [Escherichia coli UMN026]
gi|254595201|gb|ACT74562.1| hydroxymethylbilane synthase [Escherichia coli O157:H7 str.
TW14359]
gi|284923908|emb|CBG37007.1| porphobilinogen deaminase [Escherichia coli 042]
gi|291468194|gb|EFF10691.1| porphobilinogen deaminase [Escherichia coli B354]
gi|298276408|gb|EFI17927.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302]
gi|320639287|gb|EFX08909.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. G5101]
gi|320644672|gb|EFX13722.1| porphobilinogen deaminase [Escherichia coli O157:H- str. 493-89]
gi|320649997|gb|EFX18500.1| porphobilinogen deaminase [Escherichia coli O157:H- str. H 2687]
gi|320655343|gb|EFX23285.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|323974386|gb|EGB69514.1| porphobilinogen deaminase [Escherichia coli TW10509]
gi|331057348|gb|EGI29337.1| hydroxymethylbilane synthase [Escherichia coli TA143]
Length = 313
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|332998254|gb|EGK17856.1| porphobilinogen deaminase [Shigella flexneri K-272]
gi|333013794|gb|EGK33157.1| porphobilinogen deaminase [Shigella flexneri K-227]
Length = 313
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|253775572|ref|YP_003038403.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300930031|ref|ZP_07145463.1| porphobilinogen deaminase [Escherichia coli MS 187-1]
gi|253326616|gb|ACT31218.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300462064|gb|EFK25557.1| porphobilinogen deaminase [Escherichia coli MS 187-1]
Length = 320
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|204930376|ref|ZP_03221353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320780|gb|EDZ05982.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 320
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERHPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 ARAIL 310
>gi|193067963|ref|ZP_03048928.1| porphobilinogen deaminase [Escherichia coli E110019]
gi|192958583|gb|EDV89021.1| porphobilinogen deaminase [Escherichia coli E110019]
Length = 318
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|323161134|gb|EFZ47052.1| porphobilinogen deaminase [Escherichia coli E128010]
Length = 313
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTHELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|312969469|ref|ZP_07783671.1| porphobilinogen deaminase [Escherichia coli 2362-75]
gi|312286016|gb|EFR13934.1| porphobilinogen deaminase [Escherichia coli 2362-75]
Length = 313
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|254230107|ref|ZP_04923503.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|262392880|ref|YP_003284734.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|151937352|gb|EDN56214.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|262336474|gb|ACY50269.1| porphobilinogen deaminase [Vibrio sp. Ex25]
Length = 312
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA
Sbjct: 179 KLEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +A G ++ +V DG G+R D +G A +
Sbjct: 239 LEGGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDN 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAREIL 304
>gi|170769870|ref|ZP_02904323.1| porphobilinogen deaminase [Escherichia albertii TW07627]
gi|170121308|gb|EDS90239.1| porphobilinogen deaminase [Escherichia albertii TW07627]
Length = 313
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRTALPPEVSLPAVGQGAVGIECRLNDTRTRELLAALNHNETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G+ DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELVDGEIWLRALVGAPDGSQIIRGERRGSPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|194434066|ref|ZP_03066336.1| porphobilinogen deaminase [Shigella dysenteriae 1012]
gi|194417724|gb|EDX33823.1| porphobilinogen deaminase [Shigella dysenteriae 1012]
gi|320176046|gb|EFW51115.1| Porphobilinogen deaminase [Shigella dysenteriae CDC 74-1112]
Length = 318
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|157163278|ref|YP_001460596.1| porphobilinogen deaminase [Escherichia coli HS]
gi|170022172|ref|YP_001727126.1| porphobilinogen deaminase [Escherichia coli ATCC 8739]
gi|188494806|ref|ZP_03002076.1| porphobilinogen deaminase [Escherichia coli 53638]
gi|254039017|ref|ZP_04873068.1| porphobilinogen deaminase [Escherichia sp. 1_1_43]
gi|300950432|ref|ZP_07164354.1| porphobilinogen deaminase [Escherichia coli MS 116-1]
gi|300955191|ref|ZP_07167588.1| porphobilinogen deaminase [Escherichia coli MS 175-1]
gi|301646129|ref|ZP_07246029.1| porphobilinogen deaminase [Escherichia coli MS 146-1]
gi|331644538|ref|ZP_08345658.1| hydroxymethylbilane synthase [Escherichia coli H736]
gi|157068958|gb|ABV08213.1| porphobilinogen deaminase [Escherichia coli HS]
gi|169757100|gb|ACA79799.1| porphobilinogen deaminase [Escherichia coli ATCC 8739]
gi|188490005|gb|EDU65108.1| porphobilinogen deaminase [Escherichia coli 53638]
gi|226838708|gb|EEH70736.1| porphobilinogen deaminase [Escherichia sp. 1_1_43]
gi|260451352|gb|ACX41774.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|300317908|gb|EFJ67692.1| porphobilinogen deaminase [Escherichia coli MS 175-1]
gi|300450239|gb|EFK13859.1| porphobilinogen deaminase [Escherichia coli MS 116-1]
gi|301075655|gb|EFK90461.1| porphobilinogen deaminase [Escherichia coli MS 146-1]
gi|315138381|dbj|BAJ45540.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|331036210|gb|EGI08445.1| hydroxymethylbilane synthase [Escherichia coli H736]
Length = 320
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|291285218|ref|YP_003502036.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615]
gi|209753314|gb|ACI74964.1| adenylate cyclase [Escherichia coli]
gi|290765091|gb|ADD59052.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615]
Length = 320
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPHGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|149908497|ref|ZP_01897159.1| porphobilinogen deaminase [Moritella sp. PE36]
gi|149808331|gb|EDM68268.1| porphobilinogen deaminase [Moritella sp. PE36]
Length = 312
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H+ + +IP+ TKGD I + L ++GG
Sbjct: 1 MATETLRIATRKSPLAMWQAEYVKARLEAIHQ--NLTVELIPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+T + +++
Sbjct: 59 KGLFVKELEVAILENRADIAVHSMKDVPVEFPEGLDLEVICEREDPRDAFVSNTYRQIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ L R D+ ++D RG + TRLNKL+N AI+LA AG+KRL
Sbjct: 119 LPPGAIVGTCSLRRQCQLSEARPDLKIMDLRGNVNTRLNKLDNKDYDAIILAAAGLKRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E P+ GQGA+ IE +++ + + L+ +NH T D V ERA L
Sbjct: 179 MEYRIASYIEPEQSLPAVGQGAVGIECRIDDERVKALLAPLNHALTSDRVLAERAMNLAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G L+ G+V DG G+R +A +G + A +
Sbjct: 239 EGGCQVPIGSYAIIDGDELWLRGLVGKPDGTEVIRAEIRGDRKNARQLGLELADKLLAQG 298
Query: 301 NKNVF 305
K +
Sbjct: 299 AKEIL 303
>gi|205354497|ref|YP_002228298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205274278|emb|CAR39298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629631|gb|EGE35974.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 318
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 64 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 184 LEPRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 244 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 ARAIL 308
>gi|269964925|ref|ZP_06179095.1| porphobilinogen deaminase [Vibrio alginolyticus 40B]
gi|269830401|gb|EEZ84625.1| porphobilinogen deaminase [Vibrio alginolyticus 40B]
Length = 312
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T +
Sbjct: 59 GKGLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA
Sbjct: 179 KLEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +A G ++ +V DG G+R D +G A +
Sbjct: 239 LEGGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDN 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAREIL 304
>gi|191174267|ref|ZP_03035776.1| porphobilinogen deaminase [Escherichia coli F11]
gi|190905450|gb|EDV65080.1| porphobilinogen deaminase [Escherichia coli F11]
Length = 318
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|331660148|ref|ZP_08361084.1| hydroxymethylbilane synthase [Escherichia coli TA206]
gi|320185465|gb|EFW60234.1| Porphobilinogen deaminase [Shigella flexneri CDC 796-83]
gi|331052716|gb|EGI24751.1| hydroxymethylbilane synthase [Escherichia coli TA206]
gi|332084681|gb|EGI89869.1| porphobilinogen deaminase [Shigella boydii 5216-82]
gi|332084931|gb|EGI90113.1| porphobilinogen deaminase [Shigella dysenteriae 155-74]
Length = 313
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|293407432|ref|ZP_06651352.1| porphobilinogen deaminase [Escherichia coli FVEC1412]
gi|291425543|gb|EFE98581.1| porphobilinogen deaminase [Escherichia coli FVEC1412]
Length = 313
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESHIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|261823396|ref|YP_003261502.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163]
gi|261607409|gb|ACX89895.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163]
Length = 313
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQRL--NHLYPDLSVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L
Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G+TL+ +V A DG R G+ DA IG A+ +
Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRALVGAPDGSQMIVGERKGSVVDAEKIGIALAEELLAKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ASAIL 303
>gi|306815158|ref|ZP_07449311.1| porphobilinogen deaminase [Escherichia coli NC101]
gi|34222567|sp|Q8FBP1|HEM3_ECOL6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222035503|emb|CAP78248.1| Porphobilinogen deaminase [Escherichia coli LF82]
gi|305851527|gb|EFM51981.1| porphobilinogen deaminase [Escherichia coli NC101]
gi|312948358|gb|ADR29185.1| porphobilinogen deaminase [Escherichia coli O83:H1 str. NRG 857C]
Length = 313
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|56461658|ref|YP_156939.1| porphobilinogen deaminase [Idiomarina loihiensis L2TR]
gi|61213262|sp|Q5QUS3|HEM3_IDILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56180668|gb|AAV83390.1| Porphobilinogen deaminase [Idiomarina loihiensis L2TR]
Length = 313
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR S LAL A + L ++H P ++ ++P+STKGD I + L +IGG
Sbjct: 1 MTQR-VRIATRKSKLALWQAEHIQQRLEELH--PGLSVELVPMSTKGDVILDTPLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + GL++ RED RD F+S+ ++L +
Sbjct: 58 KGLFVKELEVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+
Sbjct: 118 LPEGAVVGTCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLE 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + +E P+ GQGA+ IE ++ + + L+ + ++T V ERA L
Sbjct: 178 LGDRITSFIPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C+ I +A +G +Y G+V DG G A +G + A+ +
Sbjct: 238 DGGCQVPIGAYAELEGDEVYLRGLVGEPDGGKVLRDEVRGPASKAEELGSELAERLLKQG 297
Query: 301 NKNVF 305
+
Sbjct: 298 AAEIL 302
>gi|62182409|ref|YP_218826.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167553883|ref|ZP_02347627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168244626|ref|ZP_02669558.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168263173|ref|ZP_02685146.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168467648|ref|ZP_02701485.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442426|ref|YP_002043172.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197247501|ref|YP_002148864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|213029666|ref|ZP_03344113.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213416718|ref|ZP_03349862.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213425401|ref|ZP_03358151.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649584|ref|ZP_03379637.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865139|ref|ZP_03387258.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|62130042|gb|AAX67745.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|194401089|gb|ACF61311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195630016|gb|EDX48676.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197211204|gb|ACH48601.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205321788|gb|EDZ09627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205336530|gb|EDZ23294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205348255|gb|EDZ34886.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|322716902|gb|EFZ08473.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 320
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 ARAIL 310
>gi|16767209|ref|NP_462824.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194449507|ref|YP_002047954.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|207859144|ref|YP_002245795.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|6960263|gb|AAF33453.1| 89% identity with E. coli porphobilinogen deaminase (HEMC)
(SP:P06983); contains similarity to Pfam family PF01379
(Porphobilinogen deaminase), score=627.8, E=6.2e-185,
N=1 [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16422502|gb|AAL22783.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194407811|gb|ACF68030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|206710947|emb|CAR35314.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261249062|emb|CBG26922.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996216|gb|ACY91101.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160454|emb|CBW19983.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|320088349|emb|CBY98109.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|323132286|gb|ADX19716.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326625658|gb|EGE32003.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|332990774|gb|AEF09757.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 318
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 64 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 184 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 244 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 ARAIL 308
>gi|16762196|ref|NP_457813.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143685|ref|NP_807027.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415793|ref|YP_152868.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194734788|ref|YP_002116870.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197264899|ref|ZP_03164973.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197301061|ref|ZP_02663450.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197364723|ref|YP_002144360.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243181|ref|YP_002217871.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205358019|ref|ZP_02574964.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205360118|ref|ZP_02834695.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|224585757|ref|YP_002639556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912944|ref|ZP_04656781.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289825622|ref|ZP_06544800.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|61225723|sp|P0A1Q8|HEM3_SALTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|61225724|sp|P0A1Q9|HEM3_SALTI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81599707|sp|Q5PKL7|HEM3_SALPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706297|sp|B5FN93|HEM3_SALDC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059000|sp|B5BIU8|HEM3_SALPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059001|sp|B4TNV3|HEM3_SALSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800257|sp|C0Q3B3|HEM3_SALPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|25292188|pir||AD0920 porphobilinogen deaminase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16504500|emb|CAD09382.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139320|gb|AAO70887.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56130050|gb|AAV79556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194710290|gb|ACF89511.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197096200|emb|CAR61796.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197243154|gb|EDY25774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288774|gb|EDY28149.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937697|gb|ACH75030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205328154|gb|EDZ14918.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205340974|gb|EDZ27738.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|224470285|gb|ACN48115.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|312915057|dbj|BAJ39031.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225457|gb|EFX50514.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613018|gb|EFY09969.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617394|gb|EFY14294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625614|gb|EFY22436.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627037|gb|EFY23830.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631247|gb|EFY28010.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638280|gb|EFY34979.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642784|gb|EFY39371.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646974|gb|EFY43476.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650361|gb|EFY46774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656348|gb|EFY52642.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657573|gb|EFY53843.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665984|gb|EFY62165.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666723|gb|EFY62900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671034|gb|EFY67164.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679259|gb|EFY75311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681663|gb|EFY77690.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686010|gb|EFY81998.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192636|gb|EFZ77864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196502|gb|EFZ81652.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203746|gb|EFZ88767.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323205379|gb|EFZ90353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323210748|gb|EFZ95624.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215916|gb|EGA00649.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221409|gb|EGA05827.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227573|gb|EGA11729.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231758|gb|EGA15869.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236173|gb|EGA20250.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239590|gb|EGA23638.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244314|gb|EGA28322.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249589|gb|EGA33501.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250319|gb|EGA34205.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256526|gb|EGA40257.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259776|gb|EGA43409.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265184|gb|EGA48682.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268387|gb|EGA51859.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 313
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 179 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 239 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|15804393|ref|NP_290433.1| porphobilinogen deaminase [Escherichia coli O157:H7 EDL933]
gi|15833989|ref|NP_312762.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai]
gi|300900647|ref|ZP_07118805.1| porphobilinogen deaminase [Escherichia coli MS 198-1]
gi|301025752|ref|ZP_07189267.1| porphobilinogen deaminase [Escherichia coli MS 69-1]
gi|331655487|ref|ZP_08356480.1| hydroxymethylbilane synthase [Escherichia coli M718]
gi|331675273|ref|ZP_08376024.1| hydroxymethylbilane synthase [Escherichia coli TA280]
gi|12518669|gb|AAG58997.1|AE005611_7 porphobilinogen deaminase = hydroxymethylbilane synthase
[Escherichia coli O157:H7 str. EDL933]
gi|13364211|dbj|BAB38158.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai]
gi|209753308|gb|ACI74961.1| adenylate cyclase [Escherichia coli]
gi|209753310|gb|ACI74962.1| adenylate cyclase [Escherichia coli]
gi|209753312|gb|ACI74963.1| adenylate cyclase [Escherichia coli]
gi|209753316|gb|ACI74965.1| adenylate cyclase [Escherichia coli]
gi|300355863|gb|EFJ71733.1| porphobilinogen deaminase [Escherichia coli MS 198-1]
gi|300395875|gb|EFJ79413.1| porphobilinogen deaminase [Escherichia coli MS 69-1]
gi|320660969|gb|EFX28412.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. USDA 5905]
gi|331046808|gb|EGI18892.1| hydroxymethylbilane synthase [Escherichia coli M718]
gi|331067559|gb|EGI38963.1| hydroxymethylbilane synthase [Escherichia coli TA280]
Length = 320
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|300939977|ref|ZP_07154605.1| porphobilinogen deaminase [Escherichia coli MS 21-1]
gi|300455181|gb|EFK18674.1| porphobilinogen deaminase [Escherichia coli MS 21-1]
Length = 320
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|86148167|ref|ZP_01066465.1| porphobilinogen deaminase [Vibrio sp. MED222]
gi|218710949|ref|YP_002418570.1| porphobilinogen deaminase [Vibrio splendidus LGP32]
gi|254800262|sp|B7VMD9|HEM3_VIBSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85834014|gb|EAQ52174.1| porphobilinogen deaminase [Vibrio sp. MED222]
gi|218323968|emb|CAV20330.1| Porphobilinogen deaminase [Vibrio splendidus LGP32]
Length = 312
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTNSAPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA
Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG +G R DA +G A +
Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDD 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAREIL 304
>gi|193065671|ref|ZP_03046736.1| porphobilinogen deaminase [Escherichia coli E22]
gi|194429243|ref|ZP_03061771.1| porphobilinogen deaminase [Escherichia coli B171]
gi|192926638|gb|EDV81267.1| porphobilinogen deaminase [Escherichia coli E22]
gi|194412755|gb|EDX29049.1| porphobilinogen deaminase [Escherichia coli B171]
gi|320198489|gb|EFW73090.1| Porphobilinogen deaminase [Escherichia coli EC4100B]
Length = 318
Score = 285 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|200388118|ref|ZP_03214730.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605216|gb|EDZ03761.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 320
Score = 285 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVIVRGERRGSPEQAEQMGISLAEELLENG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 ARAIL 310
>gi|209921277|ref|YP_002295361.1| porphobilinogen deaminase [Escherichia coli SE11]
gi|218556364|ref|YP_002389278.1| porphobilinogen deaminase [Escherichia coli IAI1]
gi|218697519|ref|YP_002405186.1| porphobilinogen deaminase [Escherichia coli 55989]
gi|256021454|ref|ZP_05435319.1| porphobilinogen deaminase [Shigella sp. D9]
gi|260846422|ref|YP_003224200.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str.
12009]
gi|260857792|ref|YP_003231683.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str.
11368]
gi|260870527|ref|YP_003236929.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str.
11128]
gi|293417268|ref|ZP_06659893.1| porphobilinogen deaminase [Escherichia coli B185]
gi|293468119|ref|ZP_06664531.1| porphobilinogen deaminase [Escherichia coli B088]
gi|331670648|ref|ZP_08371485.1| hydroxymethylbilane synthase [Escherichia coli TA271]
gi|226706285|sp|B6I4E0|HEM3_ECOSE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740635|sp|B7M603|HEM3_ECO8A RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800249|sp|B7L959|HEM3_ECO55 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|209914536|dbj|BAG79610.1| porphobilinogen deaminase [Escherichia coli SE11]
gi|218354251|emb|CAV00923.1| hydroxymethylbilane synthase [Escherichia coli 55989]
gi|218363133|emb|CAR00774.1| hydroxymethylbilane synthase [Escherichia coli IAI1]
gi|257756441|dbj|BAI27943.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str.
11368]
gi|257761569|dbj|BAI33066.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str.
12009]
gi|257766883|dbj|BAI38378.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str.
11128]
gi|291321497|gb|EFE60935.1| porphobilinogen deaminase [Escherichia coli B088]
gi|291431036|gb|EFF04031.1| porphobilinogen deaminase [Escherichia coli B185]
gi|323155206|gb|EFZ41390.1| porphobilinogen deaminase [Escherichia coli EPECa14]
gi|323182576|gb|EFZ67980.1| porphobilinogen deaminase [Escherichia coli 1357]
gi|323380839|gb|ADX53107.1| porphobilinogen deaminase [Escherichia coli KO11]
gi|323943796|gb|EGB39891.1| porphobilinogen deaminase [Escherichia coli H120]
gi|324115735|gb|EGC09670.1| porphobilinogen deaminase [Escherichia coli E1167]
gi|331062121|gb|EGI34043.1| hydroxymethylbilane synthase [Escherichia coli TA271]
Length = 313
Score = 285 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|119776386|ref|YP_929126.1| porphobilinogen deaminase [Shewanella amazonensis SB2B]
gi|119768886|gb|ABM01457.1| Hydroxymethylbilane synthase [Shewanella amazonensis SB2B]
Length = 326
Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 17 MSQNLIRIATRKSPLAMWQAEFVKAELERIH--PDLTVELLPMSTKGDVILDTPLAKVGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T +S+ +
Sbjct: 75 KGLFVKELEVAMLEGRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKSIDE 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL++ + AI+LA AG+ RLK
Sbjct: 135 LPQGAVVGTSSLRRQCQLRARRPDLIIKDLRGNVGTRLAKLDSGEYDAIILAAAGLIRLK 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H++T V ERA L
Sbjct: 195 LAERIAGFISTEESLPANGQGAVGIECRTNDERVKALLAPLEHKETRLRVLAERAMNTRL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA + TL G+V DG S G+ DAI +G A +
Sbjct: 255 EGGCQVPIGAFAEIEADTLTLRGLVGNPDGSEVITGSVTGSTADAIALGHQLADDLLSRG 314
Query: 301 NKNVFN 306
K + +
Sbjct: 315 AKTILD 320
>gi|218560868|ref|YP_002393781.1| porphobilinogen deaminase [Escherichia coli S88]
gi|218692081|ref|YP_002400293.1| porphobilinogen deaminase [Escherichia coli ED1a]
gi|226740633|sp|B7MH66|HEM3_ECO45 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800250|sp|B7N295|HEM3_ECO81 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218367637|emb|CAR05420.1| hydroxymethylbilane synthase [Escherichia coli S88]
gi|218429645|emb|CAR10466.1| hydroxymethylbilane synthase [Escherichia coli ED1a]
gi|323949314|gb|EGB45204.1| porphobilinogen deaminase [Escherichia coli H252]
gi|323954009|gb|EGB49807.1| porphobilinogen deaminase [Escherichia coli H263]
Length = 313
Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|215489131|ref|YP_002331562.1| porphobilinogen deaminase [Escherichia coli O127:H6 str. E2348/69]
gi|215267203|emb|CAS11651.1| hydroxymethylbilane synthase HemC [Escherichia coli O127:H6 str.
E2348/69]
Length = 320
Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|161505549|ref|YP_001572661.1| porphobilinogen deaminase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189028154|sp|A9MJ10|HEM3_SALAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|160866896|gb|ABX23519.1| hypothetical protein SARI_03714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 313
Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 159/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLKIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L E P+ GQGAI IE +++ + L+ +NH T V ERA L
Sbjct: 179 LASRIRTALPPEVSLPAVGQGAIGIECRLDDARTHALLAPLNHPQTALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 239 EGGCQVPIGSYAEIFNGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|85711585|ref|ZP_01042643.1| Porphobilinogen deaminase [Idiomarina baltica OS145]
gi|85694737|gb|EAQ32677.1| Porphobilinogen deaminase [Idiomarina baltica OS145]
Length = 310
Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 158/305 (51%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR S LA+ A ++ L ++ P I ++P+ST+GD I + L +IGG
Sbjct: 1 MS-KTVRIATRKSKLAMWQAEHIQARLASLY--PELTIELVPMSTRGDIILDTPLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + GL++ ED RD F+S+ QSL +
Sbjct: 58 KGLFVKELEAAMLEGRADLAVHSMKDLPVEFPPGLELHTICESEDPRDAFVSNHYQSLNE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+
Sbjct: 118 LPEGAVVGTCSLRRRCQVKERFPHLIINDLRGNVQTRLRKLDEGQFDAIILAASGLIRLE 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + +ED P+ GQG + IE ++ + + L++ + T V ERA L
Sbjct: 178 LGERITSFIPVEDSLPANGQGVLGIEVRSDDDEIKALLEPLQCPTTRFRVLAERAMNRRL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I FA G L G+V DG G A +G + A+ +
Sbjct: 238 QGGCQVPIGAFAVVDGDHLSLRGLVGDPDGVEVIREEIQGPVEQAEALGIELAEKLLARG 297
Query: 301 NKNVF 305
+
Sbjct: 298 AGEIL 302
>gi|148204|gb|AAA67601.1| porphobilinogen deaminase [Escherichia coli str. K-12 substr.
MG1655]
Length = 320
Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDXPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLGERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAGLPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGRPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|59727198|gb|AAW92125.1| hydroxymethylbilane synthase [Enterobacter asburiae]
Length = 313
Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L
Sbjct: 179 LESRIRVALPPELSLPAVGQGAVGIECRLDDARTRELLAPLNHDETAIRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELTEGELWLRALVGAPDGSQMVRGERRGKAQDAEQLGVSLAEELLDNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|82546156|ref|YP_410103.1| porphobilinogen deaminase [Shigella boydii Sb227]
gi|300904058|ref|ZP_07121938.1| porphobilinogen deaminase [Escherichia coli MS 84-1]
gi|301303699|ref|ZP_07209820.1| porphobilinogen deaminase [Escherichia coli MS 124-1]
gi|81247567|gb|ABB68275.1| porphobilinogen deaminase [Shigella boydii Sb227]
gi|300403938|gb|EFJ87476.1| porphobilinogen deaminase [Escherichia coli MS 84-1]
gi|300840999|gb|EFK68759.1| porphobilinogen deaminase [Escherichia coli MS 124-1]
gi|315254168|gb|EFU34136.1| porphobilinogen deaminase [Escherichia coli MS 85-1]
gi|315296783|gb|EFU56075.1| porphobilinogen deaminase [Escherichia coli MS 16-3]
Length = 320
Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|288550563|ref|ZP_06391088.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316]
gi|288314627|gb|EFC53565.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316]
Length = 318
Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL
Sbjct: 64 KGLFVKELELALLENRADIAVHSMKDVPVEFPQGLGLVTICERDDPRDAFVSNHYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ + SV+GTSSLRR+ L R D+ + RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 124 MPVGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGEYDAIILAVAGLKRLD 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + + L+ +NH+DT V ERA L
Sbjct: 184 LESRIRVALPPEFSLPAVGQGAVGIECRLDDDRTRALLAPLNHDDTAIRVKAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELSNGELWLRALVGAPDGSQMVRGERRGKPQDAEALGVSLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|191166073|ref|ZP_03027908.1| porphobilinogen deaminase [Escherichia coli B7A]
gi|190903849|gb|EDV63563.1| porphobilinogen deaminase [Escherichia coli B7A]
Length = 313
Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|332534414|ref|ZP_08410254.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505]
gi|332036148|gb|EGI72623.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505]
Length = 312
Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 166/307 (54%), Gaps = 4/307 (1%)
Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I
Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAELERFHA--DVRVELVPMSTQGDIILDTPLAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPQGLALHTICEREDPRDAFVSNNFANL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R
Sbjct: 119 SALPQGAIVGTSSLRRQCQIKALRPDLDIRDLRGNVNTRLGKLDDGQYDAIILAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L+ E I + + E P+ GQGA+ IE +++ + L+ + H T VN ER+
Sbjct: 179 LEMESRIADYIEPEVSLPANGQGAVGIECRIDDEVTKALLAPLEHTQTRIRVNAERSMNR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I +A G ++ G+V A DG G+ DA IG + A+ +
Sbjct: 239 YLEGGCQVPIGAYALVDGEQVHLRGLVGAVDGSEILRDEVTGHVNDAEKIGIELAKKLLA 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 QGADKIL 305
>gi|26250543|ref|NP_756583.1| porphobilinogen deaminase [Escherichia coli CFT073]
gi|110644128|ref|YP_671858.1| porphobilinogen deaminase [Escherichia coli 536]
gi|227888613|ref|ZP_04006418.1| hydroxymethylbilane synthase [Escherichia coli 83972]
gi|300979364|ref|ZP_07174522.1| porphobilinogen deaminase [Escherichia coli MS 200-1]
gi|300985714|ref|ZP_07177569.1| porphobilinogen deaminase [Escherichia coli MS 45-1]
gi|301047316|ref|ZP_07194402.1| porphobilinogen deaminase [Escherichia coli MS 185-1]
gi|26110973|gb|AAN83157.1|AE016769_272 Porphobilinogen deaminase [Escherichia coli CFT073]
gi|110345720|gb|ABG71957.1| porphobilinogen deaminase [Escherichia coli 536]
gi|227834452|gb|EEJ44918.1| hydroxymethylbilane synthase [Escherichia coli 83972]
gi|300300835|gb|EFJ57220.1| porphobilinogen deaminase [Escherichia coli MS 185-1]
gi|300308036|gb|EFJ62556.1| porphobilinogen deaminase [Escherichia coli MS 200-1]
gi|300407988|gb|EFJ91526.1| porphobilinogen deaminase [Escherichia coli MS 45-1]
gi|307555929|gb|ADN48704.1| porphobilinogen deaminase [Escherichia coli ABU 83972]
gi|315293155|gb|EFU52507.1| porphobilinogen deaminase [Escherichia coli MS 153-1]
gi|324007476|gb|EGB76695.1| porphobilinogen deaminase [Escherichia coli MS 57-2]
gi|324014708|gb|EGB83927.1| porphobilinogen deaminase [Escherichia coli MS 60-1]
Length = 320
Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|315178740|gb|ADT85654.1| porphobilinogen deaminase [Vibrio furnissii NCTC 11218]
Length = 312
Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGK
Sbjct: 3 STTPIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 121 PHGAIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+
Sbjct: 181 EQRIRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G L+ +V DG G R DA +G + A +
Sbjct: 241 GGCQVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|160877198|ref|YP_001556514.1| porphobilinogen deaminase [Shewanella baltica OS195]
gi|189028155|sp|A9L5G0|HEM3_SHEB9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|160862720|gb|ABX51254.1| porphobilinogen deaminase [Shewanella baltica OS195]
gi|315269402|gb|ADT96255.1| porphobilinogen deaminase [Shewanella baltica OS678]
Length = 310
Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + DA +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTDATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|157156845|ref|YP_001465286.1| porphobilinogen deaminase [Escherichia coli E24377A]
gi|300818726|ref|ZP_07098933.1| porphobilinogen deaminase [Escherichia coli MS 107-1]
gi|300823336|ref|ZP_07103467.1| porphobilinogen deaminase [Escherichia coli MS 119-7]
gi|300921486|ref|ZP_07137834.1| porphobilinogen deaminase [Escherichia coli MS 115-1]
gi|300923304|ref|ZP_07139352.1| porphobilinogen deaminase [Escherichia coli MS 182-1]
gi|301328438|ref|ZP_07221519.1| porphobilinogen deaminase [Escherichia coli MS 78-1]
gi|307313621|ref|ZP_07593241.1| porphobilinogen deaminase [Escherichia coli W]
gi|331679912|ref|ZP_08380575.1| hydroxymethylbilane synthase [Escherichia coli H591]
gi|332282690|ref|ZP_08395103.1| porphobilinogen deaminase [Shigella sp. D9]
gi|157078875|gb|ABV18583.1| porphobilinogen deaminase [Escherichia coli E24377A]
gi|300411603|gb|EFJ94913.1| porphobilinogen deaminase [Escherichia coli MS 115-1]
gi|300420390|gb|EFK03701.1| porphobilinogen deaminase [Escherichia coli MS 182-1]
gi|300524122|gb|EFK45191.1| porphobilinogen deaminase [Escherichia coli MS 119-7]
gi|300528692|gb|EFK49754.1| porphobilinogen deaminase [Escherichia coli MS 107-1]
gi|300845148|gb|EFK72908.1| porphobilinogen deaminase [Escherichia coli MS 78-1]
gi|306906602|gb|EFN37114.1| porphobilinogen deaminase [Escherichia coli W]
gi|315063097|gb|ADT77424.1| hydroxymethylbilane synthase [Escherichia coli W]
gi|324016226|gb|EGB85445.1| porphobilinogen deaminase [Escherichia coli MS 117-3]
gi|331072459|gb|EGI43791.1| hydroxymethylbilane synthase [Escherichia coli H591]
gi|332105042|gb|EGJ08388.1| porphobilinogen deaminase [Shigella sp. D9]
Length = 320
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|83643194|ref|YP_431629.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396]
gi|123753698|sp|Q2SQ70|HEM3_HAHCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83631237|gb|ABC27204.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396]
Length = 311
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 162/306 (52%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ I TR S LAL A + L +H P + ++ L+TKGD I + L ++GG
Sbjct: 1 MPKQHLVIATRQSALALWQAEHVKQRLEALH--PGLTVELLGLTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + GL + A L RE D F+S+ SL +
Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPPGLGLGAILERETPMDAFVSNQYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ ++ RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPEGAVVGTSSLRRQCQLSERRPDLKILSLRGNVNTRLAKLDAGDFDAIILAASGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+E L E P+ GQGA+ IE +++P+A L+ + +T V+ ERA L
Sbjct: 179 FSGRIREELTPEVSLPAVGQGALGIECRLDDPEAMALIAQLQDAETTARVSAERAMNHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A G + G+V + DG G A +G + A+ +
Sbjct: 239 QGGCQVPIAGYAEITGDQMRLRGLVGSPDGAQVLRDEVEGPVAAAEALGTELAERLLQQG 298
Query: 301 NKNVFN 306
+
Sbjct: 299 AGKILE 304
>gi|157144433|ref|YP_001451752.1| porphobilinogen deaminase [Citrobacter koseri ATCC BAA-895]
gi|157081638|gb|ABV11316.1| hypothetical protein CKO_00147 [Citrobacter koseri ATCC BAA-895]
Length = 318
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +L+ H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALIAQH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L +
Sbjct: 64 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNQYNNLDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L
Sbjct: 184 LTSRIRTALPPEISLPAVGQGAVGIECRLDDARTQALLAPLNHEETALRVKAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAEIIDGEVWLRALVGAPDGSQMIRGERRGLPQDAAQMGISLAEELLANG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 ARAIL 308
>gi|84393564|ref|ZP_00992318.1| porphobilinogen deaminase [Vibrio splendidus 12B01]
gi|84375843|gb|EAP92736.1| porphobilinogen deaminase [Vibrio splendidus 12B01]
Length = 312
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTNSAPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYNNID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + +GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 119 ELPQGAAVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA
Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG +G R DA +G A +
Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDD 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAREIL 304
>gi|91227534|ref|ZP_01261871.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01]
gi|91188558|gb|EAS74850.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01]
Length = 312
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAYFVKDALQAAH--PSLEVELVTMVTKGDVILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T +
Sbjct: 59 GKGLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA
Sbjct: 179 KLEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +A G ++ +V DG G+R D +G A +
Sbjct: 239 LEGGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDN 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAREIL 304
>gi|331685522|ref|ZP_08386106.1| hydroxymethylbilane synthase [Escherichia coli H299]
gi|331077223|gb|EGI48437.1| hydroxymethylbilane synthase [Escherichia coli H299]
Length = 313
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|91213326|ref|YP_543312.1| porphobilinogen deaminase [Escherichia coli UTI89]
gi|117626062|ref|YP_859385.1| porphobilinogen deaminase [Escherichia coli APEC O1]
gi|237702812|ref|ZP_04533293.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA]
gi|91074900|gb|ABE09781.1| porphobilinogen deaminase [Escherichia coli UTI89]
gi|115515186|gb|ABJ03261.1| porphobilinogen deaminase [Escherichia coli APEC O1]
gi|226902983|gb|EEH89242.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA]
gi|294490567|gb|ADE89323.1| porphobilinogen deaminase [Escherichia coli IHE3034]
gi|307628866|gb|ADN73170.1| porphobilinogen deaminase [Escherichia coli UM146]
gi|315284723|gb|EFU44168.1| porphobilinogen deaminase [Escherichia coli MS 110-3]
Length = 320
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|260767548|ref|ZP_05876484.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972]
gi|260617448|gb|EEX42631.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972]
Length = 312
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGK
Sbjct: 3 STTPIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L
Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 121 PHGAIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLQL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+
Sbjct: 181 EQRIRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G L+ +V DG G R DA +G + A +
Sbjct: 241 GGCQVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGA 300
Query: 302 KNVF 305
+++
Sbjct: 301 RDIL 304
>gi|24375795|ref|NP_719838.1| porphobilinogen deaminase [Shewanella oneidensis MR-1]
gi|39931562|sp|Q8E9H0|HEM3_SHEON RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|24350743|gb|AAN57282.1|AE015863_11 porphobilinogen deaminase [Shewanella oneidensis MR-1]
Length = 310
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|157834325|pdb|1YPN|A Chain A, Reduced Form Hydroxymethylbilane Synthase (K59q Mutant)
Crystal Structure After 2 Hours In A Flow Cell
Determined By Time-Resolved Laue Diffraction
Length = 313
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+GLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 QGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|330908104|gb|EGH36623.1| porphobilinogen deaminase [Escherichia coli AA86]
Length = 318
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AREIL 308
>gi|242237686|ref|YP_002985867.1| porphobilinogen deaminase [Dickeya dadantii Ech703]
gi|242129743|gb|ACS84045.1| porphobilinogen deaminase [Dickeya dadantii Ech703]
Length = 313
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG
Sbjct: 1 MVDNILRIATRQSPLALWQAHYVQQRLQACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + L + R+D RD F+S+ +L
Sbjct: 59 KGLFVKELELALLEDRADIAVHSMKDVPVEFPAQLGLVTICERDDPRDAFVSNRYANLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+ RL
Sbjct: 119 LPPGAVVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLGKLDNGDYDAIILAVAGLNRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L
Sbjct: 179 LEGRIRAALSPEQSLPAVGQGAVGVECRLDDTRTRALLAPLNHDDTAARVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G ++ +V + DG R G R DA +G A +
Sbjct: 239 EGGCQVPIGSYAELQGDAIWLRALVGSPDGSRIIRGERTGRRQDAEQLGISLADELLAAG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|323167552|gb|EFZ53258.1| porphobilinogen deaminase [Shigella sonnei 53G]
Length = 313
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|309796256|ref|ZP_07690666.1| porphobilinogen deaminase [Escherichia coli MS 145-7]
gi|308120138|gb|EFO57400.1| porphobilinogen deaminase [Escherichia coli MS 145-7]
Length = 320
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|281180853|dbj|BAI57183.1| porphobilinogen deaminase [Escherichia coli SE15]
Length = 313
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|50123108|ref|YP_052275.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043]
gi|55976381|sp|Q6CZG3|HEM3_ERWCT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49613634|emb|CAG77085.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043]
Length = 313
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHFYPDLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL
Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L
Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G+ DA IG A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGSVSDAEKIGVALAEELLAKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ASAIL 303
>gi|296105312|ref|YP_003615458.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059771|gb|ADF64509.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 313
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQFDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L
Sbjct: 179 LESRIRVALPPELSLPAVGQGAVGIECRLDDRRTRELLAPLNHDETAIRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELINGELWLRALVGAPDGSQMVRGERRGKPQDAEQLGISLAEELLDNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|217975048|ref|YP_002359799.1| porphobilinogen deaminase [Shewanella baltica OS223]
gi|304412540|ref|ZP_07394146.1| porphobilinogen deaminase [Shewanella baltica OS183]
gi|307307199|ref|ZP_07586937.1| porphobilinogen deaminase [Shewanella baltica BA175]
gi|254800258|sp|B8E879|HEM3_SHEB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|217500183|gb|ACK48376.1| porphobilinogen deaminase [Shewanella baltica OS223]
gi|304349182|gb|EFM13594.1| porphobilinogen deaminase [Shewanella baltica OS183]
gi|306910438|gb|EFN40869.1| porphobilinogen deaminase [Shewanella baltica BA175]
Length = 310
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|227325802|ref|ZP_03829826.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 313
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG
Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L+ E+ P+ GQGAI IE +++ ++L+ +NH T V ERA L
Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDEHVRQLLAPLNHPATAARVLAERAMNVRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G TL+ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGRVSDAEQLGIALAEELLAKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ASAIL 303
>gi|260774857|ref|ZP_05883759.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609282|gb|EEX35437.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450]
Length = 312
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 173/306 (56%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSTPIRIATRKSPLALWQAYYVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYANID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ + +R D+ + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA
Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I ++ G ++ +V DG G+R DA +G A +
Sbjct: 239 LEGGCQVPIGSYSLLDGDDIWLRALVGEPDGSKIVRGEIKGSRADAEKLGVTLANQLLDD 298
Query: 300 SNKNVF 305
+++
Sbjct: 299 GARDIL 304
>gi|187733255|ref|YP_001882498.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94]
gi|187430247|gb|ACD09521.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94]
Length = 320
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|237727921|ref|ZP_04558402.1| porphobilinogen deaminase [Citrobacter sp. 30_2]
gi|226910370|gb|EEH96288.1| porphobilinogen deaminase [Citrobacter sp. 30_2]
Length = 318
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL +
Sbjct: 64 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNSLDE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 124 LPAGSIVGTSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E ++ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L
Sbjct: 184 LESRVRTALPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 244 EGGCQVPIGSYAEIIDGEIWLRALVGAPDGSQMVCGERRGATQDAEQMGISLAEELLENG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 ARAIL 308
>gi|301029020|ref|ZP_07192174.1| porphobilinogen deaminase [Escherichia coli MS 196-1]
gi|299878014|gb|EFI86225.1| porphobilinogen deaminase [Escherichia coli MS 196-1]
Length = 320
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSDNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|283834568|ref|ZP_06354309.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220]
gi|291069698|gb|EFE07807.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220]
Length = 313
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ +L D
Sbjct: 59 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAKRRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E ++ L E P+ GQGA+ IE +++ + + L+ +NHE+T V ERA L
Sbjct: 179 LESRVRTALPPEVSLPAVGQGAVGIECRLDDMRTRALLAPLNHEETALRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELINGEIWLRALVGAPDGSQMVCGERRGAVQDAEQMGISLAEELLENG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|82779017|ref|YP_405366.1| porphobilinogen deaminase [Shigella dysenteriae Sd197]
gi|81243165|gb|ABB63875.1| porphobilinogen deaminase [Shigella dysenteriae Sd197]
Length = 320
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLVALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|323500165|ref|ZP_08105110.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326]
gi|323314794|gb|EGA67860.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326]
Length = 312
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G
Sbjct: 1 MTQSSPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T S+
Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPSGLGLVTICEREDPRDAFVSNTYNSID 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA
Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLT 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +A +G ++ +V DG G R ++ +G A +
Sbjct: 239 LEGGCQVPIGSYALLEGDDIWLRALVGEPDGSQIVRGEIKGPRSESEALGIKLANQLLDE 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAREIL 304
>gi|320178095|gb|EFW53075.1| Porphobilinogen deaminase [Shigella boydii ATCC 9905]
Length = 559
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|110835183|ref|YP_694042.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2]
gi|123345297|sp|Q0VM28|HEM3_ALCBS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110648294|emb|CAL17770.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2]
Length = 310
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG
Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLRVELVRIKTQGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +L G + RED RD F+S+T L
Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A + R D+ V RG ++TRL KL+ AI+LA AG+KRL+
Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE + EL+ ++ DTWD V ERA L
Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IAGFA + L+ G+V DG R +G D A+ +
Sbjct: 239 EGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGTAPRGQGAELGIDIAEQLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADEIL 303
>gi|74314316|ref|YP_312735.1| porphobilinogen deaminase [Shigella sonnei Ss046]
gi|73857793|gb|AAZ90500.1| porphobilinogen deaminase [Shigella sonnei Ss046]
Length = 320
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G +A +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|312963804|ref|ZP_07778275.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6]
gi|311281839|gb|EFQ60449.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6]
Length = 313
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLELAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTYTSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPPGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + + L+K ++H DT V ERA L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSEIHALLKPLDHHDTEVRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V DG G + DA +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDNIWLRGLVGDPDGGTLLTAQARGPQADATALGIQVAEELLEKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AGAIL 303
>gi|331649629|ref|ZP_08350711.1| hydroxymethylbilane synthase [Escherichia coli M605]
gi|331041499|gb|EGI13647.1| hydroxymethylbilane synthase [Escherichia coli M605]
Length = 320
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|126176187|ref|YP_001052336.1| porphobilinogen deaminase [Shewanella baltica OS155]
gi|153002481|ref|YP_001368162.1| porphobilinogen deaminase [Shewanella baltica OS185]
gi|166217785|sp|A3D9Q4|HEM3_SHEB5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217786|sp|A6WTG0|HEM3_SHEB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125999392|gb|ABN63467.1| porphobilinogen deaminase [Shewanella baltica OS155]
gi|151367099|gb|ABS10099.1| porphobilinogen deaminase [Shewanella baltica OS185]
Length = 310
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K + +
Sbjct: 299 AKTILD 304
>gi|317046390|ref|YP_004114038.1| porphobilinogen deaminase [Pantoea sp. At-9b]
gi|316948007|gb|ADU67482.1| porphobilinogen deaminase [Pantoea sp. At-9b]
Length = 313
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELVPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ S+
Sbjct: 59 KGLFVKELELAMLENRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNHYDSIDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + L++ +N DT V ERA L
Sbjct: 179 LEDRIRFALPAEISLPAVGQGAVGIECRLDDAELITLLQALNDGDTAVCVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G L+ G+V + DG R G R A +G A+ +
Sbjct: 239 EGGCQVPIGSFAVLEGDQLWLRGLVGSPDGSQMITGERRGPRDQAEQMGISLAEELLDNG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ASEIL 303
>gi|113968732|ref|YP_732525.1| porphobilinogen deaminase [Shewanella sp. MR-4]
gi|114049125|ref|YP_739675.1| porphobilinogen deaminase [Shewanella sp. MR-7]
gi|117918843|ref|YP_868035.1| porphobilinogen deaminase [Shewanella sp. ANA-3]
gi|123131000|sp|Q0HQI7|HEM3_SHESR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123325438|sp|Q0HN99|HEM3_SHESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158512312|sp|A0KS60|HEM3_SHESA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|113883416|gb|ABI37468.1| porphobilinogen deaminase [Shewanella sp. MR-4]
gi|113890567|gb|ABI44618.1| porphobilinogen deaminase [Shewanella sp. MR-7]
gi|117611175|gb|ABK46629.1| porphobilinogen deaminase [Shewanella sp. ANA-3]
Length = 310
Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L VH P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERVH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ +
Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEIHGDEMTLRGLVGNPDGSEIIEGVITGPKTEATKLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|315125211|ref|YP_004067214.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913]
gi|315013724|gb|ADT67062.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913]
Length = 312
Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 168/307 (54%), Gaps = 4/307 (1%)
Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I
Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E+ ++ G D AVHS KD+P + L++ RED RD F+S+ ++
Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPDDLELHVICEREDPRDAFVSNNFANI 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R
Sbjct: 119 DALPQGAIVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDSGQYDAIILAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L+ + I++ + E P+ GQGA+ IE +N+ + L+ + H +T VN ERA
Sbjct: 179 LEMGERIRDFIEPEVSLPANGQGAVGIECRINDEVTKALLAPLEHSETRIRVNAERAMNR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I +A G ++ G+V A DG +G+ DA +G + A+ +
Sbjct: 239 HLEGGCQVPIGAYALVDGEQVHLRGLVGAIDGSEILRDEISGHVDDAEKLGVELAKKLLA 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 QGADKIL 305
>gi|91791755|ref|YP_561406.1| porphobilinogen deaminase [Shewanella denitrificans OS217]
gi|91713757|gb|ABE53683.1| porphobilinogen deaminase [Shewanella denitrificans OS217]
Length = 315
Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L +H P ++ ++P++TKGD + + L ++GG
Sbjct: 6 MSQHLIRIATRKSPLALWQAEFVKAELERIH--PGLSVELVPMTTKGDVLLDTPLAKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +L +
Sbjct: 64 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNFANLAE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK
Sbjct: 124 LPKGAVVGTSSLRRQCQIRAMRPDLIIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L
Sbjct: 184 LISRIASYISPEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVIAERAMNTRL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L G+V DG G + +A +G A+ +
Sbjct: 244 EGGCQVPIGAYAEIEGDELTLRGLVGNPDGSQIITGQVKGLKSEASQLGEQLAEILLAQG 303
Query: 301 NKNVFN 306
K + +
Sbjct: 304 AKTILD 309
>gi|307132975|ref|YP_003884991.1| hydroxymethylbilane synthase [Dickeya dadantii 3937]
gi|306530504|gb|ADN00435.1| hydroxymethylbilane synthase [Dickeya dadantii 3937]
Length = 313
Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG
Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLKACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL D
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYDSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GTSSLRR+ L R D++V D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPVGACVGTSSLRRQCQLRAHRPDLTVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L
Sbjct: 179 LEDRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ I +A G TL+ +V A DG R G R DA +G A +
Sbjct: 239 EGGCQVPIGSYAELQDGDTLWLRALVGAPDGSRIIYAERRGLRQDAEQLGIALADELLER 298
Query: 300 SNKNVF 305
+++
Sbjct: 299 GARDIL 304
>gi|119469646|ref|ZP_01612515.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7]
gi|119446893|gb|EAW28164.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7]
Length = 312
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 164/307 (53%), Gaps = 4/307 (1%)
Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I
Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L
Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLALHTICEREDPRDAFVSNHFANL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ R
Sbjct: 119 NELPEGAVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDAGQYDAIILAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L+ + I + + E P+ GQGA+ IE + + + L+ + H T VN ERA
Sbjct: 179 LEMGERIADYIEPEVSLPANGQGAVGIECRIEDEVTKALLAPLEHTHTRIRVNAERAMNR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I +A ++ G+V A DG G+ DA +G + A+ +
Sbjct: 239 RLEGGCQVPIGAYALVDSEQVHLRGLVGAIDGSEILRDEVAGHINDAEKLGIELAEKLLA 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 QGADKIL 305
>gi|120600512|ref|YP_965086.1| porphobilinogen deaminase [Shewanella sp. W3-18-1]
gi|146294670|ref|YP_001185094.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32]
gi|158512986|sp|A1RPD7|HEM3_SHESW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217787|sp|A4YBG2|HEM3_SHEPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120560605|gb|ABM26532.1| porphobilinogen deaminase [Shewanella sp. W3-18-1]
gi|145566360|gb|ABP77295.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32]
gi|319427906|gb|ADV55980.1| porphobilinogen deaminase [Shewanella putrefaciens 200]
Length = 310
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG
Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELEVAILEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKTISE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK
Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I ++ E P+ GQGA+ IE N+ + + L+ + H +T V ERA L
Sbjct: 179 LSGRIASFISAEQSLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA G + G+V DG E G + +A +G A+ +
Sbjct: 239 EGGCQVPIGAFAEINGDEMTLRGLVGNPDGSEIIEGIITGPKTEATQLGVALAEELLSKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 AKSILD 304
>gi|30064902|ref|NP_839073.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T]
gi|56480439|ref|NP_709607.2| porphobilinogen deaminase [Shigella flexneri 2a str. 301]
gi|61213578|sp|Q83PH4|HEM3_SHIFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30043162|gb|AAP18884.1| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella
flexneri 2a str. 2457T]
gi|56383990|gb|AAN45314.2| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella
flexneri 2a str. 301]
gi|313647157|gb|EFS11612.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T]
gi|332751946|gb|EGJ82341.1| porphobilinogen deaminase [Shigella flexneri 2747-71]
gi|332996995|gb|EGK16613.1| porphobilinogen deaminase [Shigella flexneri VA-6]
gi|332997894|gb|EGK17501.1| porphobilinogen deaminase [Shigella flexneri K-218]
gi|333019501|gb|EGK38782.1| porphobilinogen deaminase [Shigella flexneri K-304]
Length = 313
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|53802806|ref|YP_115447.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath]
gi|53756567|gb|AAU90858.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath]
Length = 351
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 112/301 (37%), Positives = 163/301 (54%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGKGLF
Sbjct: 46 TLRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGKGLF 103
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L
Sbjct: 104 VKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPAD 163
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL ++
Sbjct: 164 ARIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQER 223
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L E P+ GQGAI +E + + L+ ++H T V ERA LDG C
Sbjct: 224 IAETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGC 283
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAGFA +G TL G+V DG G+ +G+ A+++ +
Sbjct: 284 QVPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGADEI 343
Query: 305 F 305
Sbjct: 344 L 344
>gi|61213332|sp|Q602K3|HEM3_METCA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 322
Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats.
Identities = 112/301 (37%), Positives = 163/301 (54%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGKGLF
Sbjct: 17 TLRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGKGLF 74
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L
Sbjct: 75 VKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPAD 134
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL ++
Sbjct: 135 ARIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQER 194
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L E P+ GQGAI +E + + L+ ++H T V ERA LDG C
Sbjct: 195 IAETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGC 254
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAGFA +G TL G+V DG G+ +G+ A+++ +
Sbjct: 255 QVPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGADEI 314
Query: 305 F 305
Sbjct: 315 L 315
>gi|194469126|ref|ZP_03075110.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205358767|ref|ZP_02658924.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194455490|gb|EDX44329.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332052|gb|EDZ18816.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 313
Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDV 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L
Sbjct: 179 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG + R G+ A +G A+ +
Sbjct: 239 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|300714797|ref|YP_003739600.1| Porphobilinogen deaminase [Erwinia billingiae Eb661]
gi|299060633|emb|CAX57740.1| Porphobilinogen deaminase [Erwinia billingiae Eb661]
Length = 313
Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLDKILRIATRQSPLALWQAHYVQQRLMACH--PGLRVELVPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KD+P +GL + RED D F+S+ S+
Sbjct: 59 KGLFVKELEQAMLEDRADIAVHSMKDVPIAFPEGLGLVTICEREDPLDAFVSNQYDSVDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLIIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE +++ +A L+ +N +DT V ERA L
Sbjct: 179 LGDRIRYAMPAEESLPAVGQGAVGIECRLDDAQAIALLSALNDDDTAIRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G L+ G+V + DG R G R DA +G A+ +
Sbjct: 239 EGGCQVPIGSFALLQGDELWLRGLVGSPDGTAMIRGERRGPRADAEKMGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|110807507|ref|YP_691027.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401]
gi|110617055|gb|ABF05722.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401]
gi|281603194|gb|ADA76178.1| Porphobilinogen deaminase [Shigella flexneri 2002017]
Length = 320
Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA +G A+ +
Sbjct: 246 EGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 AREIL 310
>gi|94501432|ref|ZP_01307951.1| porphobilinogen deaminase [Oceanobacter sp. RED65]
gi|94426397|gb|EAT11386.1| porphobilinogen deaminase [Oceanobacter sp. RED65]
Length = 310
Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 162/300 (54%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR S LAL A +S L H + ++ + T+GD+I + L +IGGKGLF
Sbjct: 4 LKIATRSSKLALWQAEFVKSELEKFHS--DLQVELVKIKTQGDKILDTPLAKIGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E +++G+ D AVHS KD+P + +GL +S RE D F+S+ Q DL +
Sbjct: 62 KELETAMLNGDADIAVHSMKDVPMEFPEGLGLSVICEREMPTDAFVSNHYQRFLDLPQGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ +L R D+ V RG ++TRL KL+ + AI+LA AG+ RL+ E+ +
Sbjct: 122 HVGTSSLRRQCQVLAARPDLKVSSLRGNVQTRLGKLDAGEFDAIILASAGLLRLELEERV 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E P+ GQGA+ IE +++ Q+L+ ++H DT V ERA L G C+
Sbjct: 182 AEHMSDEISLPAGGQGAVGIECRMDDEVTQKLLAPLHHSDTASRVYAERALNKRLQGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA +A L+ G+V + DG G A +G AA+ + +
Sbjct: 242 VPIACYATLNDGELHLRGLVGSEDGSRIIRTEIRGPESQAEQLGIQAAEDLLAQGAGEIL 301
>gi|254238043|ref|ZP_04931366.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719]
gi|126169974|gb|EAZ55485.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719]
Length = 313
Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|116053408|ref|YP_793733.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14]
gi|122256573|sp|Q02EA3|HEM3_PSEAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115588629|gb|ABJ14644.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 313
Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHSDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|77359075|ref|YP_338650.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis TAC125]
gi|76873986|emb|CAI85207.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Pseudoalteromonas haloplanktis TAC125]
Length = 312
Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR S LAL A ++ L H P + ++P+ST+GD I + L +IGGK
Sbjct: 4 TTNIVRIATRKSALALWQAEFVKAQLE--HYHPGILVELVPMSTQGDIILDTPLAKIGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E+ ++ G D AVHS KDMP + +GL + RED RD F+S+ ++ +L
Sbjct: 62 GLFVKELEQAMLEGLADMAVHSMKDMPVEFPEGLTLHTICEREDPRDAFVSNNFANIDEL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ RL+
Sbjct: 122 PQGAIVGTSSLRRQCQIRASRPDLKIHDLRGNVNTRLAKLDSGQYDAIILAAAGLIRLEM 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ + E P+ GQGA+ IE ++ + L+ + H +T VN ERA L+
Sbjct: 182 KDRIRAYIEPEVSLPANGQGAVGIECRTDDEAIKALLAPLEHSETRIRVNAERAMNRHLE 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A G ++ G+V A DG +G+ DA +G + A+ +
Sbjct: 242 GGCQVPIGAYALVNGDQVHLRGLVGAIDGSEILRDEVSGHVNDAEKLGVELAKMLLAQGA 301
Query: 302 KNVF 305
+
Sbjct: 302 DRIL 305
>gi|327395980|dbj|BAK13402.1| porphobilinogen deaminase HemC [Pantoea ananatis AJ13355]
Length = 317
Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + L+ H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLNKIFRIATRQSPLALWQAQYVQQRLISAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KD+P +GL + R+D RD F+S+ S+ +
Sbjct: 63 KGLFVKELEQAMLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDE 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL
Sbjct: 123 LPQGAVIGTSSLRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I++ L + P+ GQGA+ IE +++ L++ +NH+DT V ERA L
Sbjct: 183 LADRIRQPLPADISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G L+ G+V A DG + R G R A +G A +
Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGG 302
Query: 301 NKNVF 305
+ +
Sbjct: 303 AREIL 307
>gi|49085204|gb|AAT51260.1| PA5260 [synthetic construct]
Length = 314
Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|15600453|ref|NP_253947.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAO1]
gi|107104362|ref|ZP_01368280.1| hypothetical protein PaerPA_01005437 [Pseudomonas aeruginosa PACS2]
gi|218894362|ref|YP_002443232.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58]
gi|254243856|ref|ZP_04937178.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192]
gi|12230932|sp|Q60169|HEM3_PSEAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740638|sp|B7V5F0|HEM3_PSEA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|9951571|gb|AAG08645.1|AE004938_7 porphobilinogen deaminase [Pseudomonas aeruginosa PAO1]
gi|126197234|gb|EAZ61297.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192]
gi|218774591|emb|CAW30408.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58]
Length = 313
Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|313110333|ref|ZP_07796223.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016]
gi|310882725|gb|EFQ41319.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016]
Length = 313
Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ +N++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSINVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|317494824|ref|ZP_07953235.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917149|gb|EFV38497.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 323
Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 164/304 (53%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR SPLAL A+ R L P + ++P+ T+GD + + L ++GGKG
Sbjct: 13 NQTLRIATRQSPLALWQAYYVRDHLQA--HWPDLTVELVPMVTRGDVLLDTPLAKVGGKG 70
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L+DL
Sbjct: 71 LFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEREDPRDAFVSPKYARLEDLP 130
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR+ L R D+ V D RG + TRL KL+N AI+LA AG+KRL+ E
Sbjct: 131 EGSIVGTSSLRRQCQLREIRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAAAGLKRLELE 190
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L E P+ GQGA+ IE +N+ + Q L+ +N DT V+ ERA L+G
Sbjct: 191 ERIRYALPPEQSLPAVGQGAVGIECRLNDTRTQALLAPLNDIDTATRVSAERAMNTRLEG 250
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I ++ G ++ +V DG + R G R A +G A+ + +
Sbjct: 251 GCQVPIGSYSELNGDEIWLRALVGKPDGTLIIRGERRGPRAKAAELGVSLAEELLERGAR 310
Query: 303 NVFN 306
+
Sbjct: 311 EILE 314
>gi|260771623|ref|ZP_05880543.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14]
gi|260613400|gb|EEX38599.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14]
Length = 312
Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 166/302 (54%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR SPLAL A + +L H P + ++ + T+GD + + L ++GGKGLF
Sbjct: 6 PIRIATRQSPLALWQAHFVKDALQAAH--PHLAVELVTMVTRGDVLLDTPLAKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ G D AVHS KD+P GL + RED RD F+S+T SL+ L
Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYHSLEALPHG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GT SLRR+ + R DI + + RG + TRL KL+ + AI+LA AG+KRLK E+
Sbjct: 124 AIVGTCSLRRQCQIKAARPDIIIKELRGNVGTRLAKLDAGEFDAIVLAAAGLKRLKLEQR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++ E P+ GQGA+ IE +++ + L++ +NH DT+D V CERA L G C
Sbjct: 184 IASFISPEQSLPAVGQGAVGIECRLDDQRLLTLLEPLNHADTYDRVICERAMNLTLQGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I + G ++ +V DG G R A +G + AQ + +++
Sbjct: 244 QVPIGSYTELDGEQIWLRALVGEPDGSRIIRGEIRGPRQQAERLGVELAQQLLDQGARDI 303
Query: 305 FN 306
N
Sbjct: 304 LN 305
>gi|268592915|ref|ZP_06127136.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131]
gi|291311707|gb|EFE52160.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131]
Length = 314
Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A + L +H P + ++P+ TKGD I + L ++GGK
Sbjct: 3 STNIVRIATRKSPLALWQAHFVKDKLEQLH--PGLLVELVPMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ +L+ L
Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDNLEAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 121 PEGSIVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK L E P+ GQGA+ IE +N+ K +EL+ +N++ T V ERA L+
Sbjct: 181 ETRIKTALAPEQCLPAVGQGAVGIECRLNDSKTRELLAKLNNDATSTCVLAERAMNMRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A + ++ +V A DG + R + +A G A+ +
Sbjct: 241 GGCQVPIGSYAIWQDDKIWLRALVGAPDGSVIIRGERRVSPSEANQAGVSLAEELLERGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|296392119|ref|ZP_06881594.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAb1]
Length = 313
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSALHALLEPLHHTDTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG +A +G A+ +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AEAILE 304
>gi|239833011|ref|ZP_04681340.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301]
gi|239825278|gb|EEQ96846.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301]
Length = 314
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 149/305 (48%), Positives = 196/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ETR LM+ H +P I I+P+ST GDRI +R L+EIGGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIVPMSTAGDRIQDRALSEIGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL
Sbjct: 67 GLFTEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI E+++ E F P+PGQGAI IET + + + L+ + H +T ++ CERAFLA LD
Sbjct: 187 GDVITELVDPESFLPAPGQGAIGIETRIGDTRIDALLAPLAHRETGIALACERAFLAALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A G + F+G++L DG HE+ G +A +GR+AA+ IR +
Sbjct: 247 GSCRTPIAGLATVDGDRVSFHGMILKPDGSEAHEIRAEGPVSNAAALGREAAERIRAKAG 306
Query: 302 KNVFN 306
F
Sbjct: 307 PQFFE 311
>gi|283787518|ref|YP_003367383.1| porphobilinogen deaminase [Citrobacter rodentium ICC168]
gi|282950972|emb|CBG90649.1| porphobilinogen deaminase [Citrobacter rodentium ICC168]
Length = 313
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPAGLGLVTICEREDPRDAFVSNNYPSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + Q L+ +N E T V ERA L
Sbjct: 179 LESRIRAALPPEVSLPAVGQGAVGIECRLDDRRTQALLAPLNDEITALRVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG + R G+ A +G A+ +
Sbjct: 239 EGGCQVPIGSYAEMIDGELWLRALVGAPDGSLMVRGERRGSPEQAEQMGISLAEELLDNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|269137476|ref|YP_003294176.1| porphobilinogen deaminase [Edwardsiella tarda EIB202]
gi|267983136|gb|ACY82965.1| porphobilinogen deaminase [Edwardsiella tarda EIB202]
gi|304557549|gb|ADM40213.1| Porphobilinogen deaminase [Edwardsiella tarda FL6-60]
Length = 317
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 113/302 (37%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL A R L + P I ++P+ T+GD + + L ++GGKGLF
Sbjct: 11 TLRIATRQSPLALWQAHYVRDQL--LTHWPQLTIELVPMVTRGDVLLDTPLAKVGGKGLF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L
Sbjct: 69 VKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQLPPG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ +
Sbjct: 129 SVVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQLDDR 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L E P+ GQGA+ IE + + + L+ +NH DT V ERA L+G C
Sbjct: 189 IRTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHADTALRVCAERAMNTRLEGGC 248
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A G L+ +V A DG R G A +G A + + +
Sbjct: 249 QVPIGSYAEIDGDQLWLRALVGAPDGSRIIRGERRGPLTQAEAMGTALADELLARGARTI 308
Query: 305 FN 306
+
Sbjct: 309 LD 310
>gi|300721444|ref|YP_003710719.1| hydroxymethylbilane synthase [Xenorhabdus nematophila ATCC 19061]
gi|297627936|emb|CBJ88482.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus nematophila ATCC 19061]
Length = 313
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MTMKTIRIATRQSPLAMWQAHYVQKQLQHFH--PELKVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + GL + R+D RD F+S SL D
Sbjct: 59 KGLFVKELELALLEKRADIAVHSMKDVPVEFPNGLGLVTICERDDPRDAFVSVKYASLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + R D+ + D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPTGSVVGTSSLRRQCQLRQLRPDLVIRDLRGNVGTRLSKLDNGDYDAIILATAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L
Sbjct: 179 LEERIRMPLAPELLLPAVGQGAVGIECRLDDQQTRELLAPLNHARTEICVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V A DG + R + +A G A+ +
Sbjct: 239 EGGCQVPIGSYAIWQEDKIWLRALVGAPDGTVSVRGERVVSPEEARQAGVALAEELLEKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARQIL 303
>gi|152978040|ref|YP_001343669.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z]
gi|189042873|sp|A6VL87|HEM3_ACTSZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150839763|gb|ABR73734.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z]
Length = 309
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+++ +I TR SPLAL A + L +++ P + ++P+ TKGD I + L +IGG
Sbjct: 1 MQQEILKIATRQSPLALWQANFVKDRLTEIY--PDLTVELVPMVTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++G+ D AVHS KD+P + GL +S RED RD F+S+ ++L D
Sbjct: 59 KGLFVKELENALLNGDADIAVHSMKDVPMEFPAGLGLSVICKREDPRDAFVSNRYRTLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+++ RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 119 LPPGAIVGTSSLRRQCQLKKRRPDLNIRSLRGNVGTRLSKLDQGDYDAIILASAGLIRLA 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + E P+ GQGA+ IE +N+ + Q+L+ + +T V ERA L
Sbjct: 179 LPERIASFIETEISLPAAGQGAVGIECRINDQRVQKLLAPLADTETTACVLAERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A G+ L+ +V A DG +A +G A+ +
Sbjct: 239 QGGCQVPIGGYAVLNGNELHLRALVGALDGSKIIRAEGKSAVENAEVLGIQIAESLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|254427203|ref|ZP_05040910.1| porphobilinogen deaminase [Alcanivorax sp. DG881]
gi|196193372|gb|EDX88331.1| porphobilinogen deaminase [Alcanivorax sp. DG881]
Length = 310
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG
Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLAVELVRIKTQGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +L +G + RED RD F+S+T SL
Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPEGFALPVICEREDPRDAFVSNTFDSLSS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A + R D+ V RG ++TRL KL+ + AI+LA AG+KRL+
Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVKSLRGNVQTRLGKLDAGEFDAIILAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + E+ P+ GQGA+ IE + + +L+ ++ DTWD V ERA L
Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREADTRTIDLLSPLSDVDTWDRVVAERAMNRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C+ IAGFA + L+ G+V DG + R +G D A+ +
Sbjct: 239 DGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGSAPRAKGAELGIDIAEQLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADAIL 303
>gi|120553424|ref|YP_957775.1| porphobilinogen deaminase [Marinobacter aquaeolei VT8]
gi|166217776|sp|A1TXW9|HEM3_MARAV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120323273|gb|ABM17588.1| hydroxymethylbilane synthase [Marinobacter aquaeolei VT8]
Length = 313
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR S LAL A ++ L +H ++ +I + T+GD+I + L +IGG
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NVDVELIKIKTQGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ + +
Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNQYEHIDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A L R D+ + RG + TRL KL+ + AI+LA +G+KRL
Sbjct: 119 LPEGAVVGTASLRREAQLRANRPDLQIKVLRGNVNTRLAKLDAGEYDAIVLASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L P+ GQGA+ IE V + + EL+ +NH DTWD V+ ERA L
Sbjct: 179 FHDRIRYCLPDTFSLPAVGQGALGIECRVGDTELLELIDPLNHTDTWDRVSAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA +A + TL+ G+V A DG V R + +GR+ A+ + +
Sbjct: 239 EGGCQVPIAAYALLEDDNTLWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEQLLSM 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|146313619|ref|YP_001178693.1| porphobilinogen deaminase [Enterobacter sp. 638]
gi|167008813|sp|A4WG12|HEM3_ENT38 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145320495|gb|ABP62642.1| hydroxymethylbilane synthase [Enterobacter sp. 638]
Length = 313
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H+ + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACHQ--GLRVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL D
Sbjct: 59 KGLFVKELEIALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYASLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + E P+ GQGA+ IE +++ + + L+ +NH++T V ERA L
Sbjct: 179 LESRIRVAMPPELCLPAVGQGAVGIECRLDDDRTRALLSPLNHDETAIRVQAERAMNMRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A L+ +V A DG R G DA +G A +
Sbjct: 239 EGGCQVPIGSYAELINGELWLRALVGAPDGSQMVRGERRGLPQDAEMLGISLADELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARAIL 303
>gi|293393888|ref|ZP_06638195.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582]
gi|291423715|gb|EFE96937.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582]
Length = 313
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PDLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + GL + R+D RD F+S+ SL
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPAGLGLVTICERDDPRDAFVSNRFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRQRRPDLLVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NHE T V ERA L
Sbjct: 179 LEQRIRSPMSPEESLPAVGQGAVGIECRLDDAVTRALLAPLNHELTATRVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A G TL+ +V A DG + R G A ++G + A+ +
Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSLMVRGERRGPAAQAEHMGIELAEELLAKG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|157829875|pdb|1AH5|A Chain A, Reduced Form Selenomethionine-Labelled Hydroxymethylbilane
Synthase Determined By Mad
Length = 313
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLXASH--PGLVVELVPXVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELEVALLENRADIAVHSXKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L
Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAXNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A ++ +V A DG R G DA G A+ +
Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQXGISLAEELLNNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|148262442|ref|YP_001229148.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4]
gi|189028092|sp|A5GCW2|HEM3_GEOUR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146395942|gb|ABQ24575.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4]
Length = 318
Score = 280 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MALKTLRIGTRASQLALWQANWVKSELEKRY--PGLEVSLLKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS + D
Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGIKFA-D 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL A++LA AG+KRL
Sbjct: 118 LPKGAKIGTSALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E L + P+ GQGA+ IE ++N + + + NH T +V ERA L
Sbjct: 178 FTDKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKSAIDFFNHPATAYAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F +G L G + + DGK + S +G + +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVEGDQLKLTGFIASVDGKTSVKGSVSGPAEECEKLGITLAEQLLKDG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHEIL 302
>gi|311693131|gb|ADP96004.1| porphobilinogen deaminase [marine bacterium HP15]
Length = 313
Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR S LAL A ++ L +H + ++ + T+GD+I + L +IGG
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NITVELVKIKTQGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ ++
Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNHYDNVDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ + AI+LA +G+KRL
Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRVLRGNVNTRLAKLDAGEYEAIVLASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L P+ GQGA+ IE V++ +++ + H+DTWD V ERA L
Sbjct: 179 FHERIRYCLPDTLSLPAVGQGALGIECRVDDQDLLAMLEPLKHKDTWDRVTAERALNRRL 238
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA +A T++ G+V A DG V R + +GR+ A+ + +
Sbjct: 239 EGGCQVPIAAYALLEDDDTIWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEDLLAL 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|78484457|ref|YP_390382.1| porphobilinogen deaminase [Thiomicrospira crunogena XCL-2]
gi|123728099|sp|Q31JG5|HEM3_THICR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78362743|gb|ABB40708.1| hydroxymethylbilane synthase [Thiomicrospira crunogena XCL-2]
Length = 309
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK RI TR SPLA+ A ++ L H+ + ++P+STKGD+I + L +IGGK
Sbjct: 1 MKKTLRIATRKSPLAMWQAEFVKAELEKHHE--GLTVELLPMSTKGDKILDVPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E ++++GE D AVHS KD+P L +G + A L R + D F+S+ ++L
Sbjct: 59 GLFTKELEDRMLAGEADIAVHSMKDVPMVLPEGFALGAILERHEPTDAFVSNDYAHFEEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRRKA L+ R D+ V D RG + TRL KL+ AI+LA +G+KRL+
Sbjct: 119 PQGAVLGTSSLRRKAQLMAARPDLVVKDLRGNVGTRLGKLDAGDYDAIVLATSGLKRLEL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ I+ L+ E P+ QG + IE +P+ EL++V+NH DT ERA L+
Sbjct: 179 DERIRHELSPETCLPAVSQGTLGIEYFEKDPEVLELIQVLNHRDTEIRTLAERAMNHRLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A + +Y G+V A DG G++ D +G A+ +
Sbjct: 239 GGCQVPIGVYAELEDDQIYLRGLVGALDGSEILRSEARGSQKDPETLGVYVAEQLLEQGA 298
Query: 302 KNVF 305
+
Sbjct: 299 GEIL 302
>gi|71278494|ref|YP_266842.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H]
gi|123733846|sp|Q48AW8|HEM3_COLP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71144234|gb|AAZ24707.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H]
Length = 317
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 159/307 (51%), Gaps = 4/307 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG
Sbjct: 1 MNNTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L
Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C+ I + G ++ G+V + DG E G + +G AQ +
Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQELLS 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 RGADKIL 305
>gi|260914569|ref|ZP_05921037.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325]
gi|260631360|gb|EEX49543.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325]
Length = 311
Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I TR SPLAL A + L + P N+V++P+ TKGD I + L +IGG
Sbjct: 1 MTNNTLKIATRQSPLALWQANYVKQRLESFY--PDLNVVLVPMVTKGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+SGE D AVHS KD+P + +GL +S PRED D +S+T ++L++
Sbjct: 59 KGLFVKELEIALLSGEADIAVHSMKDVPMQFPEGLGLSVICPREDPHDALVSNTYRTLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 119 LPQGAIVGTSSLRRQCQLKQLRPDLKIESLRGNVGTRLSKLDCGDYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++I+D P+ GQGA+ IE N+ + Q+L+ + +T D V ERA L
Sbjct: 179 LTERIASFIDIQDMLPAAGQGAVGIECRKNDSRVQQLLAPLADIETTDCVLAERAMNTHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + +Y G+V A DG +A N+G A+ +
Sbjct: 239 QGGCQVPIAGYAIIENDQIYLRGLVGALDGSAILRAEAKSAVKNAENLGIQVAEMLLQQG 298
Query: 301 NKNVF 305
N+
Sbjct: 299 AGNIL 303
>gi|126208484|ref|YP_001053709.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae L20]
gi|126097276|gb|ABN74104.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 309
Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGK
Sbjct: 1 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 119 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L
Sbjct: 179 PERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 239 GGCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGA 298
Query: 302 KNVF 305
+
Sbjct: 299 DKIL 302
>gi|332995105|gb|AEF05160.1| porphobilinogen deaminase [Alteromonas sp. SN2]
Length = 311
Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RI TR S LAL A ++ L++ H + ++P+ST+GDRI + L +IGGK
Sbjct: 5 KNRTIRIATRKSALALWQAEYVKAKLLEHHD--GIAVELVPMSTQGDRILDTPLAKIGGK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ +L L
Sbjct: 63 GLFIKELEVAMLEGRADIAVHSMKDLPVEFPEGFGLHAICERENPFDAFVSNHFDNLDAL 122
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ + + R D+ + D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 123 PEGAVVGTSSLRRQCQIRKHRPDLKIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLGM 182
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ IK L P+ GQGA+ IE ++ + L++ +NH +T V+ ERA L+
Sbjct: 183 EERIKTGLPASVSLPAVGQGAVGIECRNDDAELIALLQALNHGETQTRVSAERAMNERLE 242
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I FA G ++ G+V DG S G +A +IG + A+ +
Sbjct: 243 GGCQVPIGSFATLDGDSITLTGMVGQPDGSTLLFASATGPTKNAKSIGVEVAEALLEQGA 302
Query: 302 KNVF 305
+
Sbjct: 303 GEIL 306
>gi|329297028|ref|ZP_08254364.1| porphobilinogen deaminase [Plautia stali symbiont]
Length = 313
Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MLNKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELMPMVTKGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ S+
Sbjct: 59 KGLFVKELELAMLENRADMAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNHYSSIDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 LPQGAVVGTSSLRRQCQISARRPDLVIHSLRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ L E P+ GQGA+ IE +++ L++ +NH DT V ERA L
Sbjct: 179 LEDRIRQALPAEFSLPAVGQGAVGIECRLDDQPLITLLQALNHSDTAVCVRAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA + L+ G+V A DG R G R A +G A+ +
Sbjct: 239 EGGCQVPIGSFAVLEDDQLWLRGLVGAPDGSQMVVGERRGPREQAEQMGISLAEELLDGG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 ARDIL 303
>gi|32033974|ref|ZP_00134230.1| COG0181: Porphobilinogen deaminase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 314
Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGK
Sbjct: 6 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 64 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 124 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L
Sbjct: 184 PERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQ 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 244 GGCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGA 303
Query: 302 KNVF 305
+
Sbjct: 304 DKIL 307
>gi|254360510|ref|ZP_04976659.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213]
gi|261493197|ref|ZP_05989725.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495982|ref|ZP_05992397.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153091050|gb|EDN73055.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213]
gi|261308358|gb|EEY09646.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311145|gb|EEY12320.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 311
Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 164/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A +S L P ++ ++ + TKGD I + L +IGGK
Sbjct: 1 MKDILRIATRQSPLALWQANFVKSELEK--HFPQLSVELVTMVTKGDIILDTPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ SL+DL
Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICEREDPRDAFVSNNYHSLEDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 119 PKGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ I+ +++E P+ GQGA+ IET N+ + + +NH T V ERA L
Sbjct: 179 QERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKLNHSSTACCVMAERAMNTRLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I G+A +G L +V + DG S G++ +A +G A+ +
Sbjct: 239 GGCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAKGHKQEAEQLGILVAEQLLAQGA 298
Query: 302 KNVF 305
+
Sbjct: 299 DKIL 302
>gi|149376990|ref|ZP_01894744.1| porphobilinogen deaminase [Marinobacter algicola DG893]
gi|149358767|gb|EDM47237.1| porphobilinogen deaminase [Marinobacter algicola DG893]
Length = 313
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RI TR S LAL A +S L +H + ++ + T+GD+I + L +IGG
Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKSELERLHD--NVTVELVKIKTQGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ +++G D AVHS KD+P + +GL + A RED D F+S+ ++
Sbjct: 59 KGLFVKELEEAMLAGSADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNDYDNVNA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRTLRGNVNTRLAKLDAGDYQAIVLASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L P+ GQGA+ IE +++ + +++ ++H D+ D V ERA L
Sbjct: 179 FHDRIRYCLPDSISLPAVGQGALGIECRLDDAELIAMLEPLDHRDSSDRVKAERALNRRL 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C+ IA +A + L+ G+V A DG V R + +GR+ A+ + +
Sbjct: 239 QGGCQVPIAAYALLEDNDMLWLRGLVGAVDGTQVFRVEGRAPRSEGERLGRELAEDLLAL 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|261867394|ref|YP_003255316.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412726|gb|ACX82097.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 308
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG
Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDLLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQLKTLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L
Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + S LY +V + DG +A +G A+ +
Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDGSTIIRAEGKSAVENADVLGVQIAEQLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|152983553|ref|YP_001351322.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7]
gi|167008817|sp|A6VE37|HEM3_PSEA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|150958711|gb|ABR80736.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7]
Length = 313
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PDLTVTLLPMTSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++++D P+ GQGA+ IE + L+ ++H DT V ERA L
Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADADLHALLAPLHHADTALRVTAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG A +G A +
Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGSQLLRAEGRAPLAQAEALGVQVADDLLAQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|165976435|ref|YP_001652028.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|190150336|ref|YP_001968861.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|303251057|ref|ZP_07337243.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303253601|ref|ZP_07339739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307245920|ref|ZP_07528003.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307248006|ref|ZP_07530035.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307252646|ref|ZP_07534539.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307257056|ref|ZP_07538831.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307259334|ref|ZP_07541061.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307261494|ref|ZP_07543163.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307263677|ref|ZP_07545286.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165876536|gb|ABY69584.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|189915467|gb|ACE61719.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|302647521|gb|EFL77739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302650067|gb|EFL80237.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306853139|gb|EFM85361.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306855404|gb|EFM87578.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306859891|gb|EFM91911.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306864427|gb|EFM96335.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306866570|gb|EFM98431.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868777|gb|EFN00585.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870990|gb|EFN02725.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 314
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGK
Sbjct: 6 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 64 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 124 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L
Sbjct: 184 PERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQ 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA G+ + +V A DG S +R +A +G A+ +
Sbjct: 244 GGCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGA 303
Query: 302 KNVF 305
+
Sbjct: 304 DKIL 307
>gi|306844857|ref|ZP_07477440.1| porphobilinogen deaminase [Brucella sp. BO1]
gi|306274789|gb|EFM56570.1| porphobilinogen deaminase [Brucella sp. BO1]
Length = 314
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 143/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGSLD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGAVSDAAALGTDAANRVRAMAG 306
Query: 302 KNVFN 306
+ F+
Sbjct: 307 PHFFD 311
>gi|308188851|ref|YP_003932982.1| Porphobilinogen deaminase [Pantoea vagans C9-1]
gi|308059361|gb|ADO11533.1| Porphobilinogen deaminase [Pantoea vagans C9-1]
Length = 317
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+
Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 123 LPQGAVVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++ + E P+ GQGA+ IE +N+ +L++ +NH+DT V ERA L
Sbjct: 183 MQDRIRQAMPAEVSLPAVGQGAVGIECRLNDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G L+ G+V A DG++ R G R A +G A +
Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGMVGAPDGRVMVSGERRGPRAQAEQMGISLADELLNGG 302
Query: 301 NKNVF 305
+ +
Sbjct: 303 AREIL 307
>gi|293390862|ref|ZP_06635196.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951396|gb|EFE01515.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 308
Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG
Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDRLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCQLKKLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L
Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + S LY +V + DG +A +G A +
Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDGSTIIRAEGKSAVENADVLGVQIADQLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|332290269|ref|YP_004421121.1| porphobilinogen deaminase [Gallibacterium anatis UMN179]
gi|330433165|gb|AEC18224.1| porphobilinogen deaminase [Gallibacterium anatis UMN179]
Length = 309
Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K RI TR SPLAL A + L ++ P + ++ + TKGD + + L +IGG
Sbjct: 1 MQKDVLRIATRQSPLALWQANYIKHKLQVLY--PQLTVELVTMVTKGDVLLDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P + +GL +S RED RD F+S+ SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPMQFPQGLHLSVICEREDPRDAFVSNRYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++V+GTSSLRR+ L R DI + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQNAVVGTSSLRRQCQLKALRPDIELKTLRGNVGTRLRKLDEGEYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I+ + E P+ GQGA+ +E ++ +L+K + H+DTWD V ERA L
Sbjct: 179 EQQRIRSFIAPEVSLPAVGQGAVGVECRQDDEWVNQLLKPLLHQDTWDRVIAERAMNNRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A G L+ +V A DG R A +G A+ +
Sbjct: 239 QGGCQVPIAGYAILDGEQLFLRALVGAVDGSKVLRAEATAVRSQAEQLGIQVAEMLLAQG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 AQDLL 303
>gi|288940050|ref|YP_003442290.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180]
gi|288895422|gb|ADC61258.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180]
Length = 308
Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 170/305 (55%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLA+ A + L +H P + II ++TKGD++ + L+++GG
Sbjct: 1 MSN-SIRIATRKSPLAMWQAEHVTARLKALH--PGLTVEIIGMTTKGDQLLDSPLSKVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ +++GE D AVHS KD+P + +GL ++ + RE+ D F+S+T +L +
Sbjct: 58 KGLFVKELEQGMLAGEADIAVHSMKDVPVEFPEGLHLAVIMERENPYDAFVSNTYANLAE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 118 LPEGACVGTSSLRRQCQLADRRPDLRIEPLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ ++ D P+ GQGAI IE V++ + +L+ + DT D V ERA A L
Sbjct: 178 FESRIRDCIDPVDSLPAIGQGAIGIECRVDDERVHQLIAPLADRDTTDRVLAERAMNARL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I G A G L G+V +DG +G R +A IG A +
Sbjct: 238 NGGCQVPIGGHAVLDGDRLILKGLVGTTDGSRILRAEASGPRAEAEAIGVRVADDLLGQG 297
Query: 301 NKNVF 305
+
Sbjct: 298 ADAIL 302
>gi|227357162|ref|ZP_03841531.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus
mirabilis ATCC 29906]
gi|227162694|gb|EEI47661.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus
mirabilis ATCC 29906]
Length = 313
Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V + DGK R + DA G A+ +
Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGSPDGKTILRGERLVSPEDAEQAGISLAEELLDKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|330890195|gb|EGH22856.1| porphobilinogen deaminase [Pseudomonas syringae pv. mori str.
301020]
Length = 313
Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HED V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDPAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 GADIL 303
>gi|330957337|gb|EGH57597.1| porphobilinogen deaminase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 313
Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPPGLGLFCICEREDPRDAFVSNTFDSLET 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSSISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G + A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDNVWLRGLVGDPSGSLLLHAEARAPQTAAQALGVEVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|197287145|ref|YP_002153017.1| porphobilinogen deaminase [Proteus mirabilis HI4320]
gi|238058999|sp|B4F1X3|HEM3_PROMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194684632|emb|CAR46538.1| porphobilinogen deaminase [Proteus mirabilis HI4320]
Length = 313
Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V + DG+ R + DA G A+ +
Sbjct: 239 EGGCQVPIGSYAIWQNGKIWLRALVGSPDGETILRGERLVSPEDAEQAGISLAEELLDKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|315634981|ref|ZP_07890262.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393]
gi|315476243|gb|EFU66994.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393]
Length = 346
Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK +I TR SPLAL A ++ L ++ P +I ++ + TKGD I + L +IGG
Sbjct: 39 MFKKTLKIATRQSPLALWQANFVKARLQQLY--PDLSIELVTMVTKGDVILDSPLAKIGG 96
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+T ++L +
Sbjct: 97 KGLFVKELENALLNNEADIAVHSMKDVPMQFPEGLGLSVICKREDPRDAFVSNTYRTLAE 156
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 157 LPPGAIVGTSSLRRQCQLKALRPDLEIRSLRGNVGTRLSKLDNGDFDAIILASAGLIRLG 216
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + +E P+ GQGA+ IE N+ + ++L+ + +T V ERA L
Sbjct: 217 LADRITSFIEVEQSLPAAGQGAVGIECRTNDEQVKQLLAPLADVETTYCVLAERAMNNRL 276
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + S L +V + DG +A +G A+ +
Sbjct: 277 QGGCQVPIGGYAVLRESMLNLRALVGSVDGSTIIRAEGQSAVENAEILGVQIAEQLLAQG 336
Query: 301 NKNVF 305
+
Sbjct: 337 ADKIL 341
>gi|306842959|ref|ZP_07475593.1| porphobilinogen deaminase [Brucella sp. BO2]
gi|306286887|gb|EFM58412.1| porphobilinogen deaminase [Brucella sp. BO2]
Length = 314
Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats.
Identities = 143/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306
Query: 302 KNVFN 306
+ F+
Sbjct: 307 PHFFD 311
>gi|296046581|gb|ADG86432.1| hydroxymethylbilane synthase [Francisella novicida]
Length = 317
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 161/307 (52%), Gaps = 4/307 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M++ RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG
Sbjct: 1 MKQTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D
Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L
Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C+ I + G ++ G+V + DG E G + +G AQ +
Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQELLS 298
Query: 299 ISNKNVF 305
+
Sbjct: 299 RGADKIL 305
>gi|240949414|ref|ZP_04753755.1| porphobilinogen deaminase [Actinobacillus minor NM305]
gi|240296163|gb|EER46819.1| porphobilinogen deaminase [Actinobacillus minor NM305]
Length = 308
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 160/304 (52%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A ++ L P I ++ + TKGD I + L +IGGK
Sbjct: 1 MKDTLRIATRQSPLALWQANFVKAELEK--HFPELQIELVTMVTKGDIILDTPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQNLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 119 PKGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L
Sbjct: 179 PERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA + L +V + DG S A +G + A +
Sbjct: 239 GGCQVPIGGFATLENDELTLNALVGSLDGSTIIRASGVAPVDKAEQLGIEVATKLLAQGA 298
Query: 302 KNVF 305
+
Sbjct: 299 DKIL 302
>gi|327479188|gb|AEA82498.1| porphobilinogen deaminase [Pseudomonas stutzeri DSM 4166]
Length = 312
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MS-REIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 58 KGLFVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDA 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 118 LPPGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L
Sbjct: 178 FGERIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG + +A +G A+ +
Sbjct: 238 NGGCQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEELLDQG 297
Query: 301 NKNVF 305
+ +
Sbjct: 298 AEQIL 302
>gi|146280919|ref|YP_001171072.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501]
gi|145569124|gb|ABP78230.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501]
Length = 314
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 3 MS-REIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL
Sbjct: 60 KGLFVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDA 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 120 LPPGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L
Sbjct: 180 FGERIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V DG + +A +G A+ +
Sbjct: 240 NGGCQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEELLDQG 299
Query: 301 NKNVF 305
+ +
Sbjct: 300 AEQIL 304
>gi|71738146|ref|YP_272379.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558699|gb|AAZ37910.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 328
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 16 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 74 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 134 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 194 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 254 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 313
Query: 301 NKNVF 305
++
Sbjct: 314 AADIL 318
>gi|325124236|gb|ADY83759.1| porphobilinogen deaminase [Acinetobacter calcoaceticus PHEA-2]
Length = 309
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 169/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ ++ DL
Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNRFETFADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLS 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G
Sbjct: 183 ERIRHCLTPDISLPAVGQGALGLECRAVDQDVLALIQPLLHEETDVCVRAERAFNAYLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 243 GCQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302
Query: 303 NVF 305
+
Sbjct: 303 ELL 305
>gi|62290744|ref|YP_222537.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941]
gi|82700655|ref|YP_415229.1| porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308]
gi|189024957|ref|YP_001935725.1| porphobilinogen deaminase [Brucella abortus S19]
gi|225853324|ref|YP_002733557.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457]
gi|254690032|ref|ZP_05153286.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|254694521|ref|ZP_05156349.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|254696146|ref|ZP_05157974.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|254731064|ref|ZP_05189642.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|256045496|ref|ZP_05448379.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|256112222|ref|ZP_05453143.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|256258286|ref|ZP_05463822.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|256263189|ref|ZP_05465721.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9]
gi|260546007|ref|ZP_05821747.1| porphobilinogen deaminase [Brucella abortus NCTC 8038]
gi|260562805|ref|ZP_05833291.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|260755568|ref|ZP_05867916.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|260758791|ref|ZP_05871139.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|260760515|ref|ZP_05872858.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884592|ref|ZP_05896206.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|261214839|ref|ZP_05929120.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|265991918|ref|ZP_06104475.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|265993649|ref|ZP_06106206.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|297247130|ref|ZP_06930848.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196]
gi|23821695|sp|Q8YJB0|HEM3_BRUME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|75496218|sp|Q57B08|HEM3_BRUAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123768401|sp|Q2YLM5|HEM3_BRUA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058730|sp|B2S842|HEM3_BRUA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800235|sp|C0RFD1|HEM3_BRUMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|62196876|gb|AAX75176.1| HemC, porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941]
gi|82616756|emb|CAJ11843.1| Porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308]
gi|189020529|gb|ACD73251.1| Porphobilinogen deaminase [Brucella abortus S19]
gi|225641689|gb|ACO01603.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457]
gi|260096114|gb|EEW79990.1| porphobilinogen deaminase [Brucella abortus NCTC 8038]
gi|260152821|gb|EEW87913.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|260669109|gb|EEX56049.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|260670947|gb|EEX57768.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675676|gb|EEX62497.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|260874120|gb|EEX81189.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|260916446|gb|EEX83307.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|262764630|gb|EEZ10551.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|263002984|gb|EEZ15277.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093111|gb|EEZ17246.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9]
gi|297174299|gb|EFH33646.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196]
gi|326539601|gb|ADZ87816.1| porphobilinogen deaminase [Brucella melitensis M5-90]
Length = 314
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 143/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 187 ADVITDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306
Query: 302 KNVFN 306
+ F+
Sbjct: 307 PHFFD 311
>gi|23502739|ref|NP_698866.1| porphobilinogen deaminase [Brucella suis 1330]
gi|161619804|ref|YP_001593691.1| porphobilinogen deaminase [Brucella canis ATCC 23365]
gi|163843911|ref|YP_001628315.1| porphobilinogen deaminase [Brucella suis ATCC 23445]
gi|254704902|ref|ZP_05166730.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|254707583|ref|ZP_05169411.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|254708880|ref|ZP_05170691.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|256030406|ref|ZP_05444020.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
gi|256059864|ref|ZP_05450051.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|256158389|ref|ZP_05456287.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|256253808|ref|ZP_05459344.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|256370288|ref|YP_003107799.1| porphobilinogen deaminase [Brucella microti CCM 4915]
gi|260169315|ref|ZP_05756126.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|260567624|ref|ZP_05838094.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40]
gi|261220941|ref|ZP_05935222.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|261315070|ref|ZP_05954267.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|261316373|ref|ZP_05955570.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|261323834|ref|ZP_05963031.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|261755596|ref|ZP_05999305.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|261758828|ref|ZP_06002537.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|265987445|ref|ZP_06100002.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
gi|265996901|ref|ZP_06109458.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|38258150|sp|Q8FYI6|HEM3_BRUSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189042875|sp|A9M8M2|HEM3_BRUC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189042876|sp|B0CID9|HEM3_BRUSI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23348756|gb|AAN30781.1| porphobilinogen deaminase [Brucella suis 1330]
gi|161336615|gb|ABX62920.1| porphobilinogen deaminase [Brucella canis ATCC 23365]
gi|163674634|gb|ABY38745.1| porphobilinogen deaminase [Brucella suis ATCC 23445]
gi|256000451|gb|ACU48850.1| porphobilinogen deaminase [Brucella microti CCM 4915]
gi|260157142|gb|EEW92222.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40]
gi|260919525|gb|EEX86178.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|261295596|gb|EEX99092.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|261299814|gb|EEY03311.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|261304096|gb|EEY07593.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|261738812|gb|EEY26808.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|261745349|gb|EEY33275.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|262551369|gb|EEZ07359.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|264659642|gb|EEZ29903.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
Length = 314
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 143/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306
Query: 302 KNVFN 306
+ F+
Sbjct: 307 PHFFD 311
>gi|159045244|ref|YP_001534038.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12]
gi|157913004|gb|ABV94437.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12]
Length = 347
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 127/303 (41%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR S LALA A ETR+ L +P I+ + T GDRI +R+L+EIGGKGLF
Sbjct: 40 PLKIGTRGSLLALAQAHETRARLSAAFDLPEEAFEIVVIKTTGDRIQDRSLSEIGGKGLF 99
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE ++ G ID AVHS KDMP GL + YLPRED+RD F++ +L DL
Sbjct: 100 TREIEDAMLDGSIDIAVHSMKDMPVDTPAGLALDTYLPREDVRDAFVTLDGGTLADLPEG 159
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+G+SSLRR+A L R D+ +++FRG ++TR+ KL + AHA LA AG+ RL ++V
Sbjct: 160 AVVGSSSLRRRAQLAHRRPDLQLVEFRGNVQTRMKKLGDGVAHATFLAMAGLNRLGMDEV 219
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QG I IE ++P+A E++ I+ + + CERA+L+ LDGSC
Sbjct: 220 PRSAIAPEDMLPAVAQGCIGIERRADDPRAAEMLAAIHDGPSGHRLACERAYLSALDGSC 279
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G +++ +L DG S DA +GR+ A+ +R +
Sbjct: 280 QTPIAGLAELDGGSIHLRAEILRPDGSEVLSDSETAPVEDAAKMGREVAERLRARAPDGF 339
Query: 305 FNF 307
F++
Sbjct: 340 FSW 342
>gi|88861269|ref|ZP_01135901.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2]
gi|88816750|gb|EAR26573.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2]
Length = 312
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 165/301 (54%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LAL A ++ L H P + ++P+ST+GD+I + L +IGGKGLF
Sbjct: 7 TLRIATRKSALALWQAEFVKAQLEIHH--PGIQVELVPMSTQGDKILDTPLAKIGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ ++ G D AVHS KD+P + +GL+++ RED RD F+S+ +++++L
Sbjct: 65 VKELEQAMLEGRADIAVHSMKDVPVEFPEGLELNTICEREDPRDAFVSNRFKTIEELPQG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ +
Sbjct: 125 AVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLEMPQR 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + E P+ GQGA+ IE ++ ++L+ + H +T V ERA L+G C
Sbjct: 185 IASFIEPEQSLPANGQGAVGIECRSDDITTKQLLAALEHTETRIRVLAERAMNRRLEGGC 244
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I FA G + G+V A DG G DA +G + A + +
Sbjct: 245 QVPIGAFAQVSGEHITIRGLVGAIDGSEILRDQVQGLCADAEQLGVELANKLLAQGADKI 304
Query: 305 F 305
Sbjct: 305 L 305
>gi|289625848|ref|ZP_06458802.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646420|ref|ZP_06477763.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
2250]
gi|298484668|ref|ZP_07002771.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160808|gb|EFI01826.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320326724|gb|EFW82769.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331302|gb|EFW87245.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330867941|gb|EGH02650.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330881670|gb|EGH15819.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 313
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|304398148|ref|ZP_07380023.1| porphobilinogen deaminase [Pantoea sp. aB]
gi|304354434|gb|EFM18806.1| porphobilinogen deaminase [Pantoea sp. aB]
Length = 317
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG
Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+
Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 123 LPQGAIVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I++ + E P+ GQGA+ IE +++ +L++ +NH+DT V ERA L
Sbjct: 183 LEDRIRQAMPAEVSLPAVGQGAVGIECRLDDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I FA +G+ L+ G+V A DG++ R G R A +G A +
Sbjct: 243 EGGCQVPIGSFAVLEGNDLWLRGMVGAPDGRVMVSGERRGPRAQAEQMGISLADELLNGG 302
Query: 301 NKNVF 305
+ +
Sbjct: 303 AREIL 307
>gi|37528461|ref|NP_931806.1| porphobilinogen deaminase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|55976477|sp|Q7MYN1|HEM3_PHOLL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|36787899|emb|CAE17016.1| porphobilinogen deaminase (PBG) (hydroxymethylbilane synthase)
(HMBS) (pre-uroporphyrinogen synthase) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 313
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L +IGG
Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQCH--PDLEVQLVPMVTQGDVILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ V D RG + TRLNKL+N AI+LA AG+KRLK
Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLDNGHYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IE +++ + Q L+ +NH DT V ERA L
Sbjct: 179 LHERIRTPLTAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V A DG + R DA G + A+ +
Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTALPKDACQAGVELAEELLERG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|78224425|ref|YP_386172.1| porphobilinogen deaminase [Geobacter metallireducens GS-15]
gi|123742774|sp|Q39QM7|HEM3_GEOMG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78195680|gb|ABB33447.1| Porphobilinogen deaminase [Geobacter metallireducens GS-15]
Length = 318
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MAPKQLRIGTRASQLALWQANWVKGELEKRY--PGMAVELVKIKTMGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVKFA-D 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A +L+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQILKVRPDLQMVVIRGNVETRIRKLTDENLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E L +E P+ GQGA+ IE +++ ++ + NH DT +V ERA L
Sbjct: 178 FADQVSEYLPVELSLPAIGQGALGIECRLDDETIKDTIAFFNHPDTAHAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA G TL G V + DG + + +G + +G A+ +
Sbjct: 238 EGGCQVPIAAHGQVSGDTLTLTGFVASVDGTRSVKDTISGPVTECEKLGIALAEKLLADG 297
Query: 301 NKNVF 305
+
Sbjct: 298 AHEIL 302
>gi|325294021|ref|YP_004279885.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3]
gi|325061874|gb|ADY65565.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3]
Length = 309
Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 172/306 (56%), Positives = 225/306 (73%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A+ETR+ LM H +P I+ LSTKGDRIT+R L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRNRLMSAHGLPEDMFEIVVLSTKGDRITDRALSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E +L+SGE+D AVHS+KDMPT L KGL +SA+LPRED+RD FI TA L +
Sbjct: 61 KGLFTEELESQLLSGELDIAVHSSKDMPTVLPKGLYLSAFLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G++SLRR+AL+ R R D+SVI FRG++ETRL KL +A A LLA+AG+KRL
Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLSVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V +IL+ +DFPP+P QGAIC+E+ + + + EL+ IN T+D+V CERAFLA L
Sbjct: 181 MENVPTDILDPKDFPPAPAQGAICVESRIGDTRMDELLSPINDIPTYDAVTCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAGFA C G L+F G++L DG+ H V +G R DA ++GR A + +R +
Sbjct: 241 DGSCRTPIAGFATCHGEELHFSGLILTPDGQTSHSVEISGARKDAEDLGRKAGEDVRARA 300
Query: 301 NKNVFN 306
N F+
Sbjct: 301 GSNFFD 306
>gi|39998374|ref|NP_954325.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA]
gi|55976461|sp|Q747I1|HEM3_GEOSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|39985320|gb|AAR36675.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA]
gi|298507314|gb|ADI86037.1| hydroxymethylbilane synthase [Geobacter sulfurreducens KN400]
Length = 318
Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MALNRLRIGTRASQLALWQANWVKSELEKRY--PGMEVELVKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS+ +
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFISNGVTFA-N 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL +K A++LA AG+KRL
Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDLEMVIIRGNVETRIRKLTEDKLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ E L ++ P+ GQGA+ +E +++ +E + NH DT +V ERA L
Sbjct: 178 FTDVVTEYLPVDLSLPAIGQGALGLECRLDDQAVRETIDFFNHPDTAHAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA G +L G + + DG + S +G D +G A+ +
Sbjct: 238 EGGCQVPIAAHGQVSGDSLTLTGFIASVDGTRSVKESISGPVTDCEKLGIALAEKLLADG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHEIL 302
>gi|88813066|ref|ZP_01128308.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231]
gi|88789699|gb|EAR20824.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231]
Length = 309
Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI TR SPLAL A + L + P + ++ ++T+GDRI + L IGG
Sbjct: 1 MSRRRLRIATRKSPLALWQAEHVAAELRRRY--PELEVELVAMTTRGDRILDTPLARIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +E+E+ + G D AVHS KD+P +L +G+ + L RED D F+++ Q L
Sbjct: 59 KALFVKELERGIWEGRADIAVHSIKDVPAELPEGMHLPVVLEREDPCDAFVANLYQDLAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GT+SLRR+ L R D+ V RG ++TRL KL + K AI+LA AG++RL
Sbjct: 119 LPIGARVGTASLRRECQLRAQRPDLRVGTLRGNVQTRLAKLESGKFDAIVLAAAGLRRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L E P+ GQGA+ IE ++ + EL+ + H ++ + ERA A L
Sbjct: 179 LAERIRCTLTPEQSLPAVGQGALGIECRSDDREINELIAPLTHSPSYLRITAERAVNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+GSC+ IA FA GS ++ +V + DG G +++G A+ +
Sbjct: 239 EGSCQVPIAAFAVLDGSNIWLRALVGSRDGSCVLRGEIRGPAGTGVSLGGQLAEDLLSRG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAELL 303
>gi|257485539|ref|ZP_05639580.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331011831|gb|EGH91887.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 313
Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|299771850|ref|YP_003733876.1| porphobilinogen deaminase [Acinetobacter sp. DR1]
gi|298701938|gb|ADI92503.1| porphobilinogen deaminase [Acinetobacter sp. DR1]
Length = 309
Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 169/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNQFEKFADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLS 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G
Sbjct: 183 ERIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHEETDVCVRAERAFNAYLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 243 GCQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEASNAHQLGENLARNLLDQGAG 302
Query: 303 NVF 305
+
Sbjct: 303 ELL 305
>gi|330812535|ref|YP_004356997.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380643|gb|AEA71993.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 313
Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MCPREIRIATRKSALALWQAEYVKARLEAAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + L+ ++HEDT V ERA L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V +G R DA +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGEQVWLRGLVGDPNGGRLLSAEARAPRHDAEALGVRVAEDLLSQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|119947244|ref|YP_944924.1| porphobilinogen deaminase [Psychromonas ingrahamii 37]
gi|166217780|sp|A1T0R0|HEM3_PSYIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119865848|gb|ABM05325.1| porphobilinogen deaminase [Psychromonas ingrahamii 37]
Length = 310
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A +S L+ H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MTAQKIRIATRHSPLAMWQANFIKSELLKYH--PNLIVELLPMKTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL ++ RED D F+S+ + L +
Sbjct: 59 KGLFVKELEVAILEGRADIAVHSIKDVPVDFPEGLGLTTICKREDPHDAFVSNHYKQLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR+ +L R DI + + RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 119 LPEGAIVGTCSLRRQCQILALRPDIIIKNLRGNVNTRLRKLDEGEYDAIILAAAGLMRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I ++ E P+ GQGA+ IE +++ + L+K + +T + ERA +L
Sbjct: 179 MQHRITSLIAPEVSLPAVGQGAVGIECRLDDEQTITLLKPLEDPETRIRITAERAMNLKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I FA + L+ G+V + DGK G++ DA +G A+ +
Sbjct: 239 QGGCQVPIGSFAILENEQLFLRGLVGSVDGKQIIRKEITGHQNDAQQLGITLAEQLLACG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEEIL 303
>gi|229593301|ref|YP_002875420.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25]
gi|259646262|sp|C3K424|HEM3_PSEFS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229365167|emb|CAY53424.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25]
Length = 313
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + L+K ++H DT V ERA L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSDIHALLKPLDHHDTEVRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V +G G +CDA +G AQ +
Sbjct: 239 NGGCQVPIACYAVLEGENLWLRGLVGDPEGGNLLTAEVRGPQCDATALGIQVAQALLDKG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AGAIL 303
>gi|260556364|ref|ZP_05828583.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606]
gi|260410419|gb|EEX03718.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606]
Length = 314
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 10 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 188 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 248 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 307
Query: 303 NVF 305
++
Sbjct: 308 DLL 310
>gi|17986460|ref|NP_539094.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|237816250|ref|ZP_04595243.1| porphobilinogen deaminase [Brucella abortus str. 2308 A]
gi|17982057|gb|AAL51358.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|237788317|gb|EEP62532.1| porphobilinogen deaminase [Brucella abortus str. 2308 A]
Length = 342
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 143/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 35 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 94
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 95 GLFTEEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDL 154
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 155 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 214
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 215 ADVITDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 274
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 275 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 334
Query: 302 KNVFN 306
+ F+
Sbjct: 335 PHFFD 339
>gi|225628089|ref|ZP_03786124.1| porphobilinogen deaminase [Brucella ceti str. Cudo]
gi|225616914|gb|EEH13961.1| porphobilinogen deaminase [Brucella ceti str. Cudo]
Length = 342
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 143/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 35 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 94
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 95 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 154
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 155 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 214
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 215 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 274
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 275 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 334
Query: 302 KNVFN 306
+ F+
Sbjct: 335 PHFFD 339
>gi|260551059|ref|ZP_05825263.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624]
gi|260405826|gb|EEW99314.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624]
Length = 314
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 171/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 10 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ ++D RG + TRL+KL++ + AI+LA AG+KRL E
Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIVDLRGNVGTRLSKLDDGQYDAIILASAGLKRLGLE 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + P+ GQGA+ +E ++ L++ + H +T V ERAF A L+G
Sbjct: 188 ERIRHCIEPSVSLPAVGQGALGLECRADDQDVLALIQPLLHTETDVCVRAERAFNAYLEG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 248 GCQVPIAGYATLQDGKIHIEGRVGSPDGQTLLRAELTDEAHNAQQLGENLARNLLEQGAG 307
Query: 303 NVF 305
++
Sbjct: 308 DLL 310
>gi|330985679|gb|EGH83782.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 313
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ ++ AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDASEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|15966832|ref|NP_387185.1| porphobilinogen deaminase [Sinorhizobium meliloti 1021]
gi|307301660|ref|ZP_07581419.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C]
gi|307316316|ref|ZP_07595760.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83]
gi|23821697|sp|Q92LH7|HEM3_RHIME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15076104|emb|CAC47658.1| Probable porphobilinogen deaminase [Sinorhizobium meliloti 1021]
gi|306898156|gb|EFN28898.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83]
gi|306903358|gb|EFN33947.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C]
Length = 309
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 156/305 (51%), Positives = 214/305 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLA+A ETR L H +PP I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLAMAQTHETRDRLAAAHGLPPEMFEIVILSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDMPTKL +GL +SA+LPREDIRD F+ +A+ L D
Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI VI +RG++ETRL KL + LLAYAG++RL
Sbjct: 121 LPQGATVGSSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V E+L+ E+FPP+P QGAIC+E + + + L+ I+ T ++V+CER FLA L
Sbjct: 181 MEHVPTELLDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H++ +G DA +G++A + IR +
Sbjct: 241 DGSCRTPIAGYAQSDGTHIRFAGMILTPDGTTSHQIEIDGRAADAERLGQEAGERIRAKA 300
Query: 301 NKNVF 305
F
Sbjct: 301 GPGFF 305
>gi|293610070|ref|ZP_06692371.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827302|gb|EFF85666.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 314
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 167/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 10 MKTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLS 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L + P+ GQGA+ +E + L++ + H +T V ERAF A L+G
Sbjct: 188 ERIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHAETDVCVRAERAFNAYLEG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 248 GCQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 307
Query: 303 NVF 305
+
Sbjct: 308 ELL 310
>gi|255320960|ref|ZP_05362133.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82]
gi|262379948|ref|ZP_06073103.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164]
gi|255301924|gb|EET81168.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82]
gi|262298142|gb|EEY86056.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164]
Length = 307
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 166/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGLF
Sbjct: 4 TLKIATRKSPLALWQAEHIRACLQELH--PGLTVELVTFVTQGDKILDTPLAKIGGKGLF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+ G D AVHS KD+P L GL + RED D F+S+ + + L
Sbjct: 62 VKELEAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRRK +L+ R D++++D RG + TRL+KL+ + AI+LA AG+KRL +
Sbjct: 122 ATVGTSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSER 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
IK L+ E P+ GQGA+ +E ++ +L+ + HE T V ERAF + L+G C
Sbjct: 182 IKHTLSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IA +A + L G V + DG I +G A +G + A+ + +
Sbjct: 242 QVPIAAYATLENGQLQLEGRVGSVDGLILLSSQVSGQPEHAEQLGIELAENLLSQGAGEL 301
Query: 305 F 305
Sbjct: 302 L 302
>gi|193076128|gb|ABO10737.2| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978]
Length = 309
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 183 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 243 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302
Query: 303 NVF 305
++
Sbjct: 303 DLL 305
>gi|184156604|ref|YP_001844943.1| porphobilinogen deaminase [Acinetobacter baumannii ACICU]
gi|332874912|ref|ZP_08442763.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059]
gi|183208198|gb|ACC55596.1| Porphobilinogen deaminase [Acinetobacter baumannii ACICU]
gi|322506491|gb|ADX01945.1| hemC [Acinetobacter baumannii 1656-2]
gi|323516370|gb|ADX90751.1| porphobilinogen deaminase [Acinetobacter baumannii TCDC-AB0715]
gi|332736855|gb|EGJ67831.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059]
Length = 309
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 183 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLTLIQPLLHPETDVCVRAERAFNAYLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 243 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302
Query: 303 NVF 305
++
Sbjct: 303 DLL 305
>gi|2495175|sp|Q59684|HEM3_PROMI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|726359|gb|AAC44329.1| porphobilinogen deaminase [Proteus mirabilis]
Length = 313
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK
Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L
Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V A DGK R + DA G A+ +
Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGAPDGKTILRGERLVSPEDAEQAGISLAEELLDKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|238918086|ref|YP_002931600.1| porphobilinogen deaminase, [Edwardsiella ictaluri 93-146]
gi|238867654|gb|ACR67365.1| porphobilinogen deaminase, putative [Edwardsiella ictaluri 93-146]
Length = 317
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 113/302 (37%), Positives = 159/302 (52%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL A R L+ + P I ++P+ T+GD + + L ++GGKGLF
Sbjct: 11 TLRIATRQSPLALWQAHYVRDQLLA--QWPQLTIELVPMVTRGDVLLDTPLAKVGGKGLF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L
Sbjct: 69 VKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQLPPG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ E
Sbjct: 129 SVVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQLEDR 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L E P+ GQGA+ IE + + + L+ +NH +T V ERA L+G C
Sbjct: 189 IRTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHAETALRVCAERAMNTRLEGGC 248
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A G L+ +V A DG + R G A +G A + + +
Sbjct: 249 QVPIGSYAEIDGDRLWLRALVGAPDGSLMICGERRGPLAQAEAMGTALADELLARGARAI 308
Query: 305 FN 306
+
Sbjct: 309 LD 310
>gi|330720492|gb|EGG98789.1| Porphobilinogen deaminase [gamma proteobacterium IMCC2047]
Length = 312
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 111/307 (36%), Positives = 162/307 (52%), Gaps = 3/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR S LAL A ++ L H+ + + + T+GD+I + L ++GG
Sbjct: 1 MTNKLLRIATRGSQLALWQAEYVKARLEAAHE--NLQVELDIMKTRGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P + +GL ++ RE D F+S+ S
Sbjct: 59 KGLFVKELETALLEKRADIAVHSMKDVPMEFPEGLGLAVICEREQPTDAFVSNHFASFDS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ + R DI++ RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 119 LPQGAVVGTSSLRRQCHIRALRPDINIEFLRGNVNTRLAKLDDGQFDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+IE P+ GQGA+ +E V++ L+ V++ EDT V ERA L
Sbjct: 179 MGDRITEQLSIEQSLPAAGQGAVGVECRVDDKDTLALLSVLHDEDTSICVTAERAMNRHL 238
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IAGFA +G +Y G+V DG G DA IG A +
Sbjct: 239 NGGCQVPIAGFAVLEEGGQVYLQGMVANPDGDEVLRAELRGPVADAEQIGIRVADDLLSQ 298
Query: 300 SNKNVFN 306
+ + +
Sbjct: 299 GAQAILD 305
>gi|294851125|ref|ZP_06791798.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026]
gi|294819714|gb|EFG36713.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026]
Length = 314
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 143/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306
Query: 302 KNVFN 306
+ F+
Sbjct: 307 SHFFD 311
>gi|254713697|ref|ZP_05175508.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
gi|254715953|ref|ZP_05177764.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261217716|ref|ZP_05931997.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261321437|ref|ZP_05960634.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
gi|260922805|gb|EEX89373.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261294127|gb|EEX97623.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
Length = 314
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 143/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 247 GSCRTPIAGLATVEGDRLSFQGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306
Query: 302 KNVFN 306
+ F+
Sbjct: 307 PHFFD 311
>gi|153008310|ref|YP_001369525.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188]
gi|166217778|sp|A6WXJ2|HEM3_OCHA4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151560198|gb|ABS13696.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188]
Length = 314
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 150/305 (49%), Positives = 197/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ETR LM+ H +P I IIP+ST GDRI +R L+EIGGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIIPMSTAGDRIQDRALSEIGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL
Sbjct: 67 GLFTEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++ + E FPP+PGQGAI IET + + + L+ + H +T ++ CERAFLA LD
Sbjct: 187 GDVITDLADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A G T+ F+G++L DG HE+ G +A IG +AA+++R +
Sbjct: 247 GSCRTPIAGLATVNGDTVSFHGMILKPDGSEAHEIKTEGPASNAAAIGTEAAEHLRAKAG 306
Query: 302 KNVFN 306
F
Sbjct: 307 PQFFE 311
>gi|262373963|ref|ZP_06067240.1| porphobilinogen deaminase [Acinetobacter junii SH205]
gi|262310974|gb|EEY92061.1| porphobilinogen deaminase [Acinetobacter junii SH205]
Length = 305
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 168/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L +++ P + ++ T+GD+I + L +IGGKG
Sbjct: 1 MKTLKIATRQSPLALWQAEHIRARLNELY--PDLTVELVKFVTQGDKILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ +L
Sbjct: 59 LFVKELEAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNQYAHFDELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 119 HGAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L P+ GQGA+ +E ++ + EL+ + HE T V ERAF A L+G
Sbjct: 179 ERIRHCLAPTLSLPAVGQGALGLECRADDQELLELISPLQHEVTSICVRAERAFNAYLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + L+ G V + DGK + +G + +G A+ +
Sbjct: 239 GCQVPIAGYATITQNQLHIEGRVGSVDGKTLLKEQLSGALDEGERLGVVLAEKLLAQGAG 298
Query: 303 NVF 305
+
Sbjct: 299 ELL 301
>gi|331005642|ref|ZP_08329011.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989]
gi|330420567|gb|EGG94864.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989]
Length = 324
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR SPLAL A ++ L +H P + ++P++++GD I + L ++GGKG
Sbjct: 13 KNTITIATRKSPLALWQAEYVKARLEALH--PEVTVELLPMTSRGDHILDVPLAKVGGKG 70
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L++GE D AVHS KD+P + +GL +S RED RD F+S S DL
Sbjct: 71 LFVKELEHALLNGEADIAVHSMKDVPMEFPEGLGLSVICEREDPRDAFVSEKYASFADLP 130
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ LL R D+ + RG + TRL KL+ + AI+LA AG+ RLK
Sbjct: 131 QGAVVGTSSLRRQCQLLEQRPDLQITFLRGNVNTRLRKLDEGEYDAIILAAAGLMRLKMA 190
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L E P+ GQGA+ IE ++ + + + +N T + V ERA L+G
Sbjct: 191 DRITEYLTPELCLPAGGQGAVGIECRDDDEQVKTWLAPLNDPITHECVAAERAMNRRLEG 250
Query: 243 SCKSAIAGFA--YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ IA +A G L+ G+V + DGKI E G A ++G A+ +
Sbjct: 251 GCQVPIASYAIHSADGKQLWLRGLVGSPDGKIMLEDEVTGAPDQADDLGVKLAERLLDKG 310
Query: 301 NKNVF 305
+ +
Sbjct: 311 AETIL 315
>gi|104784255|ref|YP_610753.1| porphobilinogen deaminase [Pseudomonas entomophila L48]
gi|123380753|sp|Q1I316|HEM3_PSEE4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|95113242|emb|CAK17970.1| porphobilinogen deaminase [Pseudomonas entomophila L48]
Length = 313
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLQVSLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T +SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFKSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLVRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHIDTADRVVAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRASAEALGVQVAEDLLSQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|183600277|ref|ZP_02961770.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827]
gi|188020068|gb|EDU58108.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827]
Length = 314
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A+ + L H P + ++P+ TKGD I + L ++GGK
Sbjct: 3 STNIVRIATRKSPLALWQAYFVKEKLEQFH--PGLQVELVPMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L
Sbjct: 61 GLFVKELELALLEKRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYDSLDAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL
Sbjct: 121 PAGSVVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ L E P+ GQGA+ IE +++ + ++L++ +N ++T V ERA L+
Sbjct: 181 EARIRTALAPEQSLPAVGQGAVGIECRLDDERTRQLLEKLNDDNTSVCVLAERAMNMRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A + ++ +V A DG R A G A+ +
Sbjct: 241 GGCQVPIGSYAIWQDGQIWLRALVGAPDGSQVIRGERLTTPEQATQAGISLAEELLDKGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|118581775|ref|YP_903025.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379]
gi|158512569|sp|A1AUE7|HEM3_PELPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118504485|gb|ABL00968.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379]
Length = 310
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR S LAL A +S L + P + + + T GDRI + L ++GG
Sbjct: 1 MPPRQLRIGTRASQLALWQANWVKSELEKRY--PAMEVTLTKIKTMGDRILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD +S A+
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVVSRAARFSH- 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+LRR+A LL R D+ ++ RG +ETR+ KL+ A++LA AG+KRL
Sbjct: 118 LPPGARVGTSALRRQAQLLHARPDLEMVTIRGNVETRIRKLDEENLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E L++E P+ GQGA+ IE +++P E + NH DT +V ERA L
Sbjct: 178 LTQRVAEYLDVEFSIPAIGQGALGIECRLSDPVVTEAIAFFNHPDTSHAVRAERALLRRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IA +G L G++ A DG+ F +G ++G + A +
Sbjct: 238 QGGCQVPIAAHGTIRGGELRLVGLIAAVDGREFVRDEISGPVDQCEHLGEELADRLLSRG 297
Query: 301 NKNVFN 306
+ +
Sbjct: 298 GRAILE 303
>gi|290477117|ref|YP_003470030.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus bovienii SS-2004]
gi|289176463|emb|CBJ83272.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Xenorhabdus bovienii SS-2004]
Length = 311
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 165/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLA+ A + L H P + +IP+ T+GD I + L ++GGKG
Sbjct: 1 MKIIRIATRQSPLAMWQAQYVQKQLEQFH--PELKVELIPMVTRGDVILDTPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ D AVHS KD+P + GL + R D RD F+S SL +L
Sbjct: 59 LFVKELELALLENRADIAVHSMKDVPVEFPDGLGLVTICERGDPRDAFVSVKYTSLDELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ S++GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL E
Sbjct: 119 IGSIVGTSSLRRQCQLRQLRPDLVVRDLRGNVGTRLGKLDNGDYDAIILAAAGLKRLGLE 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G
Sbjct: 179 DRIRMPLEPELLLPAVGQGAVGIECRLDDKQTRELLAPLNHTGTEICVLAERAMNTHLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I +A +G+ ++ +V A DG I + + +A G + A+ + +
Sbjct: 239 GCQVPIGSYAIWQGNNIWLRALVGAPDGSITVRGEKTVSPEEARRAGVELAEELLEKGAR 298
Query: 303 NVF 305
+
Sbjct: 299 QIL 301
>gi|254502424|ref|ZP_05114575.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11]
gi|222438495|gb|EEE45174.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11]
Length = 308
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 142/305 (46%), Positives = 199/305 (65%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ P RIGTR S LALA A ETR+ LM H +P I+ + T GD+I +R L+E+GG
Sbjct: 1 MQSNPLRIGTRGSALALAQAHETRARLMAAHDLPEDAFEIVVIKTSGDQIQDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L D
Sbjct: 61 KGLFTKEIEEAMLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLMD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL
Sbjct: 121 LPHGAVVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGEVDATLLAYAGLRRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ + +L EDF P+ GQGAICIE+ + + E+++ I+ +T ++ ERAFLA L
Sbjct: 181 LEEEVTSLLETEDFLPAVGQGAICIESREGDERTLEMLQAIHDRETQIRLDAERAFLAVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G A G L G VL DG H+ R+G DA+ IG+ A + ++
Sbjct: 241 DGSCRTPIGGLALLNGDELTLKGTVLKPDGSEVHDEVRSGGAVDAVQIGQAAGEALKAKM 300
Query: 301 NKNVF 305
Sbjct: 301 GPGFL 305
>gi|239502040|ref|ZP_04661350.1| porphobilinogen deaminase [Acinetobacter baumannii AB900]
Length = 309
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 183 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + +Y G V + DG+ +A +G + A+ +
Sbjct: 243 GCQVPIAGYATLQDGKIYIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302
Query: 303 NVF 305
++
Sbjct: 303 DLL 305
>gi|219871198|ref|YP_002475573.1| porphobilinogen deaminase [Haemophilus parasuis SH0165]
gi|219691402|gb|ACL32625.1| porphobilinogen deaminase [Haemophilus parasuis SH0165]
Length = 309
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGK
Sbjct: 1 MKEILRIATRQSPLALWQANFVKDALEQ--RFPQLSVELVTMVTKGDIILDTPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L
Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 119 PAGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L
Sbjct: 179 SERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA G + +V + DG S GN +A +G + A+ +
Sbjct: 239 GGCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGA 298
Query: 302 KNVF 305
++
Sbjct: 299 DHIL 302
>gi|239995985|ref|ZP_04716509.1| porphobilinogen deaminase [Alteromonas macleodii ATCC 27126]
Length = 312
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGK
Sbjct: 6 TTRTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L
Sbjct: 64 GLFIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDAL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 124 PQGAVVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLEM 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I+ L + P+ GQGA+ IE ++ + +L++ +NH DT V ERA L+
Sbjct: 184 ESRIRMPLPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLE 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I FA G L G+V DG S +R A +IG + A+ +
Sbjct: 244 GGCQVPIGSFATLDGDVLTLTGMVGKPDGSELLFASATASREKAADIGVEVAESLLEQGA 303
Query: 302 KNVF 305
+
Sbjct: 304 GEIL 307
>gi|90406695|ref|ZP_01214888.1| porphobilinogen deaminase [Psychromonas sp. CNPT3]
gi|90312148|gb|EAS40240.1| porphobilinogen deaminase [Psychromonas sp. CNPT3]
Length = 311
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A +S L+ H P + ++ + TKGD+I + L ++GG
Sbjct: 1 MSNKIIRIATRHSPLAMWQANFVKSELLKWH--PELQVELLAMKTKGDKILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL ++ RED RD F+S+ ++
Sbjct: 59 KGLFVKELEVAILEGRADIAVHSMKDVPVDFPEGLGLAVICEREDPRDAFVSNHFANIAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R DI V D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPQGSVVGTSSLRRQCQLRAQRPDIKVKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++E+ P+ GQGA+ IE +++ + L+K + H T V ERA L
Sbjct: 179 MHDRIASYMSVEESLPAVGQGAVGIECRLDDMQTLALLKPLEHRITRLRVTAERAMNLAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I + K TL+ G+V + DG G DA +G + AQ +
Sbjct: 239 QGGCQVPIGSYCILKEDTLWLRGLVGSVDGTHIIRKEIRGKVADAEQMGLNLAQQLLESG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|169797472|ref|YP_001715265.1| porphobilinogen deaminase [Acinetobacter baumannii AYE]
gi|213155714|ref|YP_002317759.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057]
gi|169150399|emb|CAM88296.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
baumannii AYE]
gi|213054874|gb|ACJ39776.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057]
Length = 314
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 169/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKG
Sbjct: 10 MKTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 188 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 248 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 307
Query: 303 NVF 305
++
Sbjct: 308 DLL 310
>gi|167855158|ref|ZP_02477929.1| porphobilinogen deaminase [Haemophilus parasuis 29755]
gi|167853703|gb|EDS24946.1| porphobilinogen deaminase [Haemophilus parasuis 29755]
Length = 309
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGK
Sbjct: 1 MKEILRIATRQSPLALWQANFVKDALEQ--RFPQLSVELVTMVTKGDIILDTPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L
Sbjct: 59 GLFVKELELALLKNRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 119 PAGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L
Sbjct: 179 SERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA G + +V + DG S GN +A +G + A+ +
Sbjct: 239 GGCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGA 298
Query: 302 KNVF 305
++
Sbjct: 299 DHIL 302
>gi|261345249|ref|ZP_05972893.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541]
gi|282566947|gb|EFB72482.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541]
Length = 314
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A+ ++ L +H P + ++P+ TKGD I + L ++GGK
Sbjct: 3 STNIVRIATRKSPLALWQAYFVKAKLEQLH--PNLQVELVPMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ +L
Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 121 PAGSIVGTSSLRRQCQLKELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ IK L E P+ GQGA+ IE +++ + ++L+ +NH++T V ERA L+
Sbjct: 181 DERIKTALEPELSLPAVGQGAVGIECRLDDQRTRDLLAKLNHDETSICVLAERAMNMRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A + + ++ +V A DG R A G A+ +
Sbjct: 241 GGCQVPIGSYAIWQDNKIWLRALVGAPDGSTVIRGERLVEPEHATQAGIALAEELLDKGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|215484908|ref|YP_002327147.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294]
gi|301346814|ref|ZP_07227555.1| porphobilinogen deaminase [Acinetobacter baumannii AB056]
gi|301512648|ref|ZP_07237885.1| porphobilinogen deaminase [Acinetobacter baumannii AB058]
gi|301595532|ref|ZP_07240540.1| porphobilinogen deaminase [Acinetobacter baumannii AB059]
gi|332851472|ref|ZP_08433469.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150]
gi|332866846|ref|ZP_08437233.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113]
gi|213987600|gb|ACJ57899.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294]
gi|332729925|gb|EGJ61256.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150]
gi|332734374|gb|EGJ65495.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113]
Length = 309
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 169/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKG
Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 183 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 242
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 243 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302
Query: 303 NVF 305
++
Sbjct: 303 DLL 305
>gi|307250258|ref|ZP_07532212.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857699|gb|EFM89801.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 314
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 164/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A + L + P ++ ++ + TKGD I + +L +IGGK
Sbjct: 6 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTSLAKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 64 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 124 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L
Sbjct: 184 PERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQ 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GF+ G+ + +V A DG S +R +A +G A+ +
Sbjct: 244 GGCQVPIGGFSTLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGA 303
Query: 302 KNVF 305
+
Sbjct: 304 DKIL 307
>gi|150398163|ref|YP_001328630.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419]
gi|150029678|gb|ABR61795.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419]
Length = 330
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 152/305 (49%), Positives = 208/305 (68%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA ETR L H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 22 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPVEMFEIVTLSTKGDRITDRSLAEIGG 81
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDM TKL GL +SA+LPRED+RD F+ +A L +
Sbjct: 82 KGLFTEELEQQLLSGDLDFAVHSSKDMTTKLPDGLFLSAFLPREDVRDAFVGRSATRLAE 141
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R D++VI +RG++ETRL KL + LLAYAG++RL
Sbjct: 142 LPQGATVGSSSLRRQALIRRLRPDVNVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 201
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V E+L+ E FPP+P QGAICIE + + + L+ ++ T ++V+CER FLA L
Sbjct: 202 MAHVPTELLDPESFPPAPAQGAICIEARLGDDRINALLSAVDDPRTHEAVSCERGFLATL 261
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H + +G DA +GR+A + IR +
Sbjct: 262 DGSCRTPIAGYAQSDGARIRFSGMILTPDGTTCHRIETDGRTADAAALGREAGERIRAKA 321
Query: 301 NKNVF 305
F
Sbjct: 322 GPEFF 326
>gi|114321817|ref|YP_743500.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|122310751|sp|Q0A577|HEM3_ALHEH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114228211|gb|ABI58010.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 308
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLA+ A + L H P + ++P+ T+GDRI ++ L+ IGG
Sbjct: 1 MPQDKLRIATRRSPLAMWQAEHVAAELRRHH--PGLEVELVPMVTRGDRILDQALSRIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ + G D AVHS KD+P ++ G + L R + D F+S+ + L D
Sbjct: 59 KGLFIKELEQGMEEGRADLAVHSMKDVPWRMPDGFALPVILERHEPTDAFVSNHYRRLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +GT+SLRR+ R D+ V RG + TRL KL+ + AI+LA +G+ RL
Sbjct: 119 LPEGGHLGTASLRRQCQAKARRPDLRVSTLRGNVNTRLAKLDAGEFDAIILAASGLSRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I L E+ P+ GQGA+ IE + + QELV ++H T + ERA A L
Sbjct: 179 FDERIARRLPPEESLPAVGQGALGIECLAEDRRVQELVAPLDHGPTHTLLKAERAMNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A +G ++ G+V + DG+ G A +G +
Sbjct: 239 QGSCQVPIAGYACYQGEEIWLRGLVGSPDGQEIVRGEVRGPIAQAAELGDRLGGELLERG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AARIL 303
>gi|225850000|ref|YP_002730234.1| porphobilinogen deaminase [Persephonella marina EX-H1]
gi|225645034|gb|ACO03220.1| porphobilinogen deaminase [Persephonella marina EX-H1]
Length = 308
Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats.
Identities = 115/301 (38%), Positives = 169/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L P + ++ + TKGD+I + L ++GGKGLF
Sbjct: 3 IRIGTRKSKLALWQANYIADQLKK--HFPDLEVELVKIVTKGDKILDVPLAKVGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S S++D+ +
Sbjct: 61 KEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRKA ++ R DI + D RG ++TR+ KL + I+LAYAG+KRL E +
Sbjct: 121 VLGTSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQYDGIILAYAGLKRLGLEGKV 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++IL + P+ QG + IE +++ K +E+V V+NH ++ ERAFL L+G C+
Sbjct: 181 RQILQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+AG++ L G V G S G+ DA ++G A+ + K V
Sbjct: 241 VPLAGYSEIVNGKLKITGFVSDLTGDRVFRDSMEGSLEDAESLGVKLAEKLLSDGAKEVL 300
Query: 306 N 306
Sbjct: 301 E 301
>gi|237801592|ref|ZP_04590053.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331024452|gb|EGI04508.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 313
Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A +S L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSTREIRIATRQSALALWQAEYVKSRLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLEDRADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFDSLQA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I +++ED P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G + A+ +
Sbjct: 239 NGGCQVPIACYAILEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVEVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAKIL 303
>gi|226946767|ref|YP_002801840.1| porphobilinogen deaminase [Azotobacter vinelandii DJ]
gi|226721694|gb|ACO80865.1| porphobilinogen deaminase [Azotobacter vinelandii DJ]
Length = 314
Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 5 REIRIATRKSALALWQAEYVKARLEQAH--PGLAVSLVPMVSRGDKLLDAPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L
Sbjct: 63 FVKELETALLENAADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNAFASLDELPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S+IGTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL E
Sbjct: 123 GSLIGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEG 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + I D P+ GQGA+ IE + + Q L+ ++H T V ERA L+G
Sbjct: 183 RIRSRIAIADSLPAGGQGAVGIECRSADREIQALLAPLDHAPTALRVGAERALNKRLNGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA +A + L+ G+V DG++ +A +G A+ + +
Sbjct: 243 CQVPIACYAELEDGQLWLRGLVGQPDGRLLLRAEARAPADEAEALGVRVAEALLAQGAQR 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|304414148|ref|ZP_07395516.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1]
gi|304283362|gb|EFL91758.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1]
Length = 312
Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A R SL H P + ++P++T+GD + + L +IGG
Sbjct: 1 MSEKVIRIATRQSPLALWQADYVRKSLESHH--PDLQVKLVPITTRGDTLLHTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KD+P GL + R D D F+S + LK
Sbjct: 59 KGLFVKELEQALLENCADIAVHSIKDVPIHFPAGLGLVVICQRGDPHDAFVSKNYKHLKQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ + + + V D RG + TRLNKL+ AI+LA AG++RL
Sbjct: 119 LPPGSIVGTSSLRRQCQIRKKYPHLIVRDLRGNVGTRLNKLDQGAYQAIILAVAGLQRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ +++ E+ P+ GQGAI IE + + ++L+ +NH T + ERA L
Sbjct: 179 LQSRIQHVMSPEESLPAAGQGAIGIECRLEDDVTRQLLAPLNHFPTERRICAERALNIRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A +G L V DG R G A IG D A +
Sbjct: 239 EGGCQVPIGSYAELEGDNLRLRAFVSTPDGSQMIYGERCGLAIQAEKIGLDLATELIAEG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|66043333|ref|YP_233174.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a]
gi|289677629|ref|ZP_06498519.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5]
gi|302187597|ref|ZP_07264270.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae 642]
gi|75504025|sp|Q500N6|HEM3_PSEU2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|63254040|gb|AAY35136.1| Porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a]
gi|330901069|gb|EGH32488.1| porphobilinogen deaminase [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330952274|gb|EGH52534.1| porphobilinogen deaminase [Pseudomonas syringae Cit 7]
gi|330970393|gb|EGH70459.1| porphobilinogen deaminase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 313
Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|222054398|ref|YP_002536760.1| porphobilinogen deaminase [Geobacter sp. FRC-32]
gi|254800252|sp|B9M416|HEM3_GEOSF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|221563687|gb|ACM19659.1| porphobilinogen deaminase [Geobacter sp. FRC-32]
Length = 318
Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MALKQLRIGTRASQLALWQANWVKSELEQRY--PGMEVSLVKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS + D
Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGTKFA-D 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL K A++LA AG+KRL
Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDMEMVIIRGNVETRINKLETEKLDAVILAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E L + P+ GQGA+ IE ++N + ++ + NH T +V ERA L
Sbjct: 178 FTEKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKQTIDFFNHPATAYAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F GS L G + + DGK + G D +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVTGSDLKLVGFIASVDGKTSVRGTITGPAADCEKLGIKLAEQLLADG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHAIL 302
>gi|52424331|ref|YP_087468.1| porphobilinogen deaminase [Mannheimia succiniciproducens MBEL55E]
gi|61213369|sp|Q65VX7|HEM3_MANSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52306383|gb|AAU36883.1| HemC protein [Mannheimia succiniciproducens MBEL55E]
Length = 310
Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 163/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K +I TR SPLAL A + L ++ P + ++ + TKGD I + L +IG
Sbjct: 1 MNNKNHLKIATRQSPLALWQANYVKDRLTALY--PDLQVELVTMVTKGDVILDTPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+ +SL
Sbjct: 59 GKGLFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 ELPQGAIVGTSSLRRQCQLKSLRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + + P+ GQGA+ IE V++ Q L+ + H++T V ERA
Sbjct: 179 GMAERIASFIETDISLPAAGQGAVGIECRVDDELVQSLLAPLAHQETTICVLAERAMNNR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ I GFA K ++ +V A+DG +A +G A+ +
Sbjct: 239 LQGGCQVPIGGFAQVKNGEVFLRALVGATDGSQIIRAEGKSAVENAEVLGVQIAEDLLQQ 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GADKIL 304
>gi|322514003|ref|ZP_08067077.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976]
gi|322120153|gb|EFX92114.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976]
Length = 309
Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 160/304 (52%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A + L + P + ++ + TKGD I + L +IGGK
Sbjct: 1 MKDILRIATRQSPLALWQANFVKKELEK--RFPELQVELVTMVTKGDIILDTPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L
Sbjct: 59 GLFVKELELALLEKRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 119 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYEAIILASAGLIRLGM 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ + +E P+ GQGA+ IET VN+ + + +NH T V ERA L
Sbjct: 179 PERIRSFIAVEQSLPAAGQGAVGIETRVNDERVLNYLASLNHNPTACCVMAERAMNTRLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA G+ + +V A DG S + DA +G A+ +
Sbjct: 239 GGCQVPIGGFATLNGNEITLNALVGALDGSTIIRASGVADIEDAEQLGISVAEQLLAQGA 298
Query: 302 KNVF 305
+
Sbjct: 299 DKIL 302
>gi|330976469|gb|EGH76521.1| porphobilinogen deaminase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 313
Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AADIL 303
>gi|262280694|ref|ZP_06058477.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202]
gi|262257594|gb|EEY76329.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202]
Length = 314
Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 171/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 10 MKTLKIATRQSPLALWQAEYIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ VID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQVIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLS 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L + P+ GQGA+ +E + + L++ + HE+T V ERAF A L+G
Sbjct: 188 ERIRHCLTPDISLPAVGQGALGLECRAADNEVLSLIQPLLHEETDVCVRAERAFNAYLEG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V ++DG+ +A +G + A+ +
Sbjct: 248 GCQVPIAGYATLQNGQIHIEGRVGSADGQTLLRAELTDEASNAHQLGENLARNLLDQGAG 307
Query: 303 NVF 305
+
Sbjct: 308 ELL 310
>gi|212710180|ref|ZP_03318308.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM
30120]
gi|212687179|gb|EEB46707.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM
30120]
Length = 314
Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RI TR SPLAL A+ ++ L +H + ++P+ TKGD I + L ++GGK
Sbjct: 3 STNIVRIATRKSPLALWQAYFVKAKLEQLHS--GLQVELVPMVTKGDIILDTPLAKVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ L
Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+
Sbjct: 121 PAGSIVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLEL 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ IK L E P+ GQGA+ IE +N+ + ++L+ +NH+ T V ERA L+
Sbjct: 181 DERIKTALEPEQSLPAVGQGAVGIECRLNDQRTRDLLAKLNHDATSICVLAERAMNMRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +A +G ++ +V A DG R DAI G A+ +
Sbjct: 241 GGCQVPIGSYAIWQGDKIWLRALVGAPDGSQVIRGERLIAPVDAIQAGISLAEELLNKGA 300
Query: 302 KNVF 305
+ +
Sbjct: 301 REIL 304
>gi|148559606|ref|YP_001259712.1| porphobilinogen deaminase [Brucella ovis ATCC 25840]
gi|166201494|sp|A5VSL5|HEM3_BRUO2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148370863|gb|ABQ60842.1| porphobilinogen deaminase [Brucella ovis ATCC 25840]
Length = 304
Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats.
Identities = 143/301 (47%), Positives = 197/301 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT
Sbjct: 1 MKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL +
Sbjct: 61 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI
Sbjct: 121 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+
Sbjct: 181 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F
Sbjct: 241 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 300
Query: 306 N 306
+
Sbjct: 301 D 301
>gi|15889908|ref|NP_355589.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58]
gi|23821691|sp|Q8UC46|HEM3_AGRT5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15157859|gb|AAK88374.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58]
Length = 309
Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats.
Identities = 167/306 (54%), Positives = 225/306 (73%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A+ETRS LM H +P I+ LSTKGDRIT+R L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRSRLMAAHGLPEEMFEIVVLSTKGDRITDRALSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E +L+SGE+D AVHS+KDMPT L +GL +SA+LPRED+RD FI TA L +
Sbjct: 61 KGLFTEELENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G++SLRR+AL+ R R D++VI FRG ++TRL KL +A A LLA+AG+KRL
Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLNVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K+ V EIL+ ++FPP+P QGAI +E+ + + + +L+ IN T+D+V CERAFLA L
Sbjct: 181 KDNVPTEILDPKEFPPAPAQGAIGVESRIGDARMDKLLAPINDRPTYDAVTCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A C+G L+F G++L DG+ H V +GNR DA+ +G+ A + +R +
Sbjct: 241 DGSCRTPIAGYATCEGDNLHFSGLILTPDGQTSHGVEISGNRRDALILGKKAGEEVRAKA 300
Query: 301 NKNVFN 306
N F
Sbjct: 301 GSNFFE 306
>gi|89093768|ref|ZP_01166714.1| porphobilinogen deaminase [Oceanospirillum sp. MED92]
gi|89081898|gb|EAR61124.1| porphobilinogen deaminase [Oceanospirillum sp. MED92]
Length = 313
Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats.
Identities = 109/308 (35%), Positives = 177/308 (57%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P N+ ++ +++KGD+I + L ++GG
Sbjct: 1 MS-RTIRIATRKSPLALWQAEYVKAELERHH--PGINVELLGMTSKGDKILDAPLAKVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ +++GE D AVHS KD+P + +GL ++ PRE D F+S+T S+++
Sbjct: 58 KGLFVKELEEAMLAGEADIAVHSMKDVPMEFPEGLGLAVICPREQPTDAFVSNTYNSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A + R D+ + RG + TRL KL++ + AI+LA AG+ RL+
Sbjct: 118 LPEGAVVGTSSLRREAQIREKRPDLQIKWLRGNVNTRLRKLDDGEYDAIILASAGLIRLE 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ +++E P+ GQGA+ IE ++ + EL+K ++ ++T V+ ERA L
Sbjct: 178 MPERIRSEISVEFSLPAGGQGAVGIECRTDDHELLELLKPLHDQETAWRVSAERAMNRRL 237
Query: 241 DGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C+ IA +A LY G+V DG + G A +G A +
Sbjct: 238 EGGCQVPIACYATLNDDNSELYLRGLVAKPDGTLILRDEERGTPEQAEQLGITLADRLLA 297
Query: 299 ISNKNVFN 306
K++ +
Sbjct: 298 AGAKSILD 305
>gi|121997816|ref|YP_001002603.1| porphobilinogen deaminase [Halorhodospira halophila SL1]
gi|229836112|sp|A1WVT9|HEM3_HALHL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|121589221|gb|ABM61801.1| hydroxymethylbilane synthase [Halorhodospira halophila SL1]
Length = 310
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA+ A + L +H P + ++P+ST+GD I ++ L IGG
Sbjct: 1 MAAESLRIATRRSQLAMWQAEHIAAELQRLH--PGLEVELVPMSTRGDEILDQPLARIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE D AVHS KD+P +L +G ++A R D RD F+S+ L +
Sbjct: 59 KGLFMKELEDGMLRGEADLAVHSMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR+ ++ R D+ + RG ++TRL KL++ AI+LA +G+ RL+
Sbjct: 119 LPHGARVGTASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLDDGVYDAIILAASGLDRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I L E P+ GQGA+ IE + + +LV+ +NHE T +N ER A L
Sbjct: 179 LTHRIAGRLTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+GSC+ I G+A G ++ G+V A DG G +A N+GR +
Sbjct: 239 EGSCQVPIGGYAELDGDEVHLRGLVGAIDGSEVIRGEIRGPAAEAENLGRQLGDDLLARG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADRIL 303
>gi|257465324|ref|ZP_05629695.1| porphobilinogen deaminase [Actinobacillus minor 202]
gi|257450984|gb|EEV25027.1| porphobilinogen deaminase [Actinobacillus minor 202]
Length = 308
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 159/304 (52%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A ++ L P I ++ + TKGD I + L +IGGK
Sbjct: 1 MKDILRIATRQSPLALWQANFVKAELEK--HFPELQIELVTMVTKGDIILDTPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ QSL L
Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQSLDKL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL
Sbjct: 119 PKGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L
Sbjct: 179 PERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I GFA + L +V + DG S A +G + A +
Sbjct: 239 GGCQVPIGGFATLENDELTLNALVGSLDGSTIIRASGVAPVDKAEQLGIEVATKLLAQGA 298
Query: 302 KNVF 305
+
Sbjct: 299 DKIL 302
>gi|12655813|gb|AAK00605.1|AF221100_2 porphobilinogen deaminase [Selenomonas ruminantium subsp.
ruminantium]
Length = 313
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K IGTR S LAL A + L + + P + + ++TKGD+I + L +IGG
Sbjct: 1 MKKDTIVIGTRSSKLALWQAEYVKGRLEEEY--PGLKVELKLMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SG ID AVHS KDMPT+L +GL ++A R D D +S ++
Sbjct: 59 KGLFTKELEMDMLSGGIDLAVHSLKDMPTELPEGLTLAAITKRFDPGDAVVSPKFKTFAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRKA LL R D+++ D RG + TRL KL + AI+LA AG+KRL
Sbjct: 119 LPCGAKVGTSSLRRKAQLLHARPDLNICDLRGNVNTRLAKLESENFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E+L + P+ GQGA+ IET ++ +E++ +N E T ERAFL +
Sbjct: 179 FGERITEVLPRDMVLPAVGQGALAIETREDDADMREMLAFLNDEATVHCAKAERAFLGRV 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A + ++ + DG+ + +G +A +G A+ +
Sbjct: 239 EGGCQVPVGVYAVPAANDEIQVEAVIASLDGQRLYRDKLSGKASEAEKLGVTLAEKLLAA 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GGQKIL 304
>gi|169634609|ref|YP_001708345.1| porphobilinogen deaminase [Acinetobacter baumannii SDF]
gi|169153401|emb|CAP02532.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
baumannii]
Length = 314
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 169/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A + L ++H P + ++ T+GD+I + L +IGGKG
Sbjct: 10 MKTLKIATRQSPLALWQAEHICARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL
Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G
Sbjct: 188 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDICVRAERAFNAYLEG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + ++ G V + DG+ +A +G + A+ +
Sbjct: 248 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 307
Query: 303 NVF 305
++
Sbjct: 308 DLL 310
>gi|15603677|ref|NP_246751.1| porphobilinogen deaminase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722234|gb|AAK03896.1| Pbg [Pasteurella multocida subsp. multocida str. Pm70]
Length = 312
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG
Sbjct: 5 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 62
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L +
Sbjct: 63 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 122
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL
Sbjct: 123 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 182
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L
Sbjct: 183 QQQRITSLIDVTQCLPAVGQGAVGIECRQEA-EIELLLAPLADPETTACVLAERAMNRHL 241
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + L+ +V DG DA +G A+ +
Sbjct: 242 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQG 301
Query: 301 NKNVF 305
+
Sbjct: 302 ADKIL 306
>gi|227823724|ref|YP_002827697.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234]
gi|227342726|gb|ACP26944.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234]
Length = 309
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 157/305 (51%), Positives = 208/305 (68%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA ETR L H +PP ++ LSTKGDRIT+R L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPPEMFEVVVLSTKGDRITDRPLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L+SG++D AVHS+KDMPTKL GL +SA+LPREDIRD F+ TA L +
Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPDGLFLSAFLPREDIRDAFVGRTAPRLVE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI +RG++ETRL KL + LLA+AG+KRL
Sbjct: 121 LPEGATVGSSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAFAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V E+L+ ++FPP+P QGAICIE+ + + L+ I+ T ++V CER FLA L
Sbjct: 181 MTDVPTELLDPKEFPPAPAQGAICIESRDGDDRVNALLAAIDDPRTHEAVACERGFLATL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G+ + F G++L DG H V +G DA +GR A + IR +
Sbjct: 241 DGSCRTPIAGYAQSDGTYIRFSGMILTPDGATSHRVEIDGKAQDATELGRKAGEQIRDKA 300
Query: 301 NKNVF 305
F
Sbjct: 301 GPGFF 305
>gi|24211767|sp|Q9CK24|HEM3_PASMU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG
Sbjct: 2 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L +
Sbjct: 60 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL
Sbjct: 120 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L
Sbjct: 180 QQQRITSLIDVTQCLPAVGQGAVGIECRQEA-EIELLLAPLADPETTACVLAERAMNRHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + L+ +V DG DA +G A+ +
Sbjct: 239 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|254700531|ref|ZP_05162359.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
gi|261751035|ref|ZP_05994744.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
gi|261740788|gb|EEY28714.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
Length = 314
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 142/305 (46%), Positives = 197/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IG R S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 7 KNGTLKIGARGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++
Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306
Query: 302 KNVFN 306
+ F+
Sbjct: 307 PHFFD 311
>gi|218781846|ref|YP_002433164.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01]
gi|218763230|gb|ACL05696.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01]
Length = 310
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 119/301 (39%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLAL A + L + P ++ + TKGD+I + L ++GGKGLF
Sbjct: 7 IKIGTRGSPLALWQAEHVAALLERRN--PNVKTELVVIKTKGDKILDVPLAKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G D AVHS KD+P++ GL ++A + RED RD I A+ L DL ++
Sbjct: 65 KEIEESLLDGRTDMAVHSMKDVPSEFPPGLCLAAIMEREDPRDALICSRAKGLLDLPPNA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR A LL D+ + RG I TRL+KL + AI+LA AG+KR+ + +
Sbjct: 125 KIGTSSLRRSAQLLALMPDLQIEPLRGNIGTRLDKLTSLNLDAIVLAAAGVKRMAMDDKV 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E + E P+ GQGA+ IE ++P A L + +NHE T V ERAFL LDG C+
Sbjct: 185 SEYIPEETVLPAVGQGAMGIEIREDDPVAGPLARALNHEPTQVIVTGERAFLKRLDGGCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A KG L G++ DG S +G + DA +G A+ + K V
Sbjct: 245 VPVAAHGRLKGDFLQLTGVIAGVDGTPIFRDSVSGKKEDAKELGVKLAEKLLNAGGKAVL 304
Query: 306 N 306
+
Sbjct: 305 D 305
>gi|153875202|ref|ZP_02003104.1| porphobilinogen deaminase [Beggiatoa sp. PS]
gi|152068334|gb|EDN66896.1| porphobilinogen deaminase [Beggiatoa sp. PS]
Length = 309
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL R L H P I ++ ++T+GD+I + L +IGGK
Sbjct: 3 NKNIIRIATRKSPLALWQTHHVRDILCHAH--PQLQIELVEMTTQGDKILDVPLAKIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L G++D AVHS KD+P + GL + + RE+ D F+S+ L
Sbjct: 61 GLFVKELENGLFEGKVDIAVHSMKDVPVEFPPGLILPVIMEREEPYDAFVSNHYSGFTAL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR+ LL R D+ + RG + TRL KL+N AI+LA AG+KRL
Sbjct: 121 PQGAIVGTSSLRRQCQLLVLRPDLQIRTLRGNVGTRLKKLDNGDYDAIILAAAGLKRLGM 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+E+L E P+ GQGAI IE ++ + Q+L+ V+NH+ T + + ERA +L+
Sbjct: 181 AERIREVLKPEVMLPAIGQGAIGIECRADDTETQQLIAVLNHKPTQERLKAERALNEQLN 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A + + G+V DGK G A +G++ A +
Sbjct: 241 GGCQVPIAGYAEIEAEMMTVRGLVGDIDGKEVLHHKVQGPIESAETLGKELATELLAQGA 300
Query: 302 KNVF 305
+
Sbjct: 301 DRLL 304
>gi|330876446|gb|EGH10595.1| porphobilinogen deaminase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 313
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|70733286|ref|YP_263060.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5]
gi|123734674|sp|Q4K3X3|HEM3_PSEF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|68347585|gb|AAY95191.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5]
Length = 313
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L + H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLQEAH--PGLVVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ + D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLENQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPEGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT V ERA L
Sbjct: 179 FEDRISSSISVDDSLPAGGQGAVGIECRSADIEIHALLAPLHHADTASRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G + G R A +G A +
Sbjct: 239 NGGCQVPIACYAVLEGEQIWLRGLVGEPSGGLLLSAEARGPRASAAELGVQVADALLAQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 ADDIL 303
>gi|325576792|ref|ZP_08147407.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC
33392]
gi|325160998|gb|EGC73116.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC
33392]
Length = 310
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 107/302 (35%), Positives = 163/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL DL
Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDDLPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ L + R D+ + RG + TRL+KL+N + AI+LA AG+ RL +
Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G
Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I G+A + ++ +V +DG +A +G A+ +
Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGETDGSAIIRAEGKSAVENAEALGVSIAEQLLAQGADK 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|220933221|ref|YP_002512120.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|254800261|sp|B8GSU8|HEM3_THISH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219994531|gb|ACL71133.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 316
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 166/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLA+ A + + H P + ++ ++T+GDRI + L ++GG
Sbjct: 1 MPLDTLRIATRKSPLAVWQAEHVAALVKARH--PGVRVELVGMTTQGDRILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +L +GL + L RED RD F+S+T +SL +
Sbjct: 59 KGLFVKELETGLLEGRADIAVHSMKDVPMELPEGLCLPVILDREDPRDAFVSNTFKSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ L ++D RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPRDARVGTSSLRRQCQLRHDHPHFQILDLRGNVNTRLAKLDAGEFDAIILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E P+ GQGAI IE N+P+ L+ ++ DT V ERA A L
Sbjct: 179 FEVRIASEITPEQSLPAIGQGAIGIECRENDPEVMALIGSLDDPDTHVRVAAERAMNARL 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IAG+A TL G+V DG + +G R +A +GR A +
Sbjct: 239 NGGCQVPIAGYAELTDADTLRLRGLVGEPDGSLILRAELSGPRAEAEALGRAVADLLLHE 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAGPIL 304
>gi|322421444|ref|YP_004200667.1| porphobilinogen deaminase [Geobacter sp. M18]
gi|320127831|gb|ADW15391.1| porphobilinogen deaminase [Geobacter sp. M18]
Length = 318
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEKRY--PDMTVTLKKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVKFA-D 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLETEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE ++N + ++ + NH DT +V ERA L
Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECSLSNEEVKDAISFFNHPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA + G L G + + DGK+ + G + +G A+ +
Sbjct: 238 EGGCQVPIAAYGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADECEKLGVKLAEQLLSDG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHAIL 302
>gi|292493894|ref|YP_003529333.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4]
gi|291582489|gb|ADE16946.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4]
Length = 310
Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 163/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K RI TR S LAL A +L H P ++ ++ +ST+GD+I + L ++G
Sbjct: 1 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHHPGLSVELVRMSTQGDKILDTPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L+SGE D AVHS KD+P L + L IS RED RD F+S+ Q L
Sbjct: 59 GKGLFVKELEQGLLSGEADIAVHSMKDVPVVLPEDLHISVICEREDPRDAFVSNHWQQLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA +G+KRL
Sbjct: 119 SLPEGARVGTSSLRRQSQVRERRPDFHVLDLRGNVNTRLAKLDNNEFDGIVLAASGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E+L E P+ GQGAI IE + +EL+KV+ H T ++ ERA
Sbjct: 179 GLTDRITELLAPEVSLPAIGQGAIGIECRKGDTATEELLKVLEHTPTRTTIRAERALNER 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ IA +A G L +V DG G +A +G + +
Sbjct: 239 LAGGCQVPIAAYAELDGERLRLRALVGQPDGGKVIRGEMWGTPEEAEVLGVSLGEDLLRR 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GADKIL 304
>gi|28867368|ref|NP_789987.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|38257983|sp|Q88B91|HEM3_PSESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28850602|gb|AAO53682.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 313
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|330501254|ref|YP_004378123.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01]
gi|328915540|gb|AEB56371.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01]
Length = 312
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 161/305 (52%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MS-REIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDAPLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 58 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDA 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 118 LPAGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ ++ ED P+ GQGA+ IE + L+ ++H +T V ERA L
Sbjct: 178 FADRIRSSISAEDSLPAGGQGAVGIECRSADSDVHALLAPLHHRETALRVTAERALNKHL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A + L+ G+V DG + DA +G A+ +
Sbjct: 238 NGGCQVPIACYALLEDDQLWLRGLVGQPDGGLLLRAEERAASGDAEALGVRVAEALLAQG 297
Query: 301 NKNVF 305
+
Sbjct: 298 ADAIL 302
>gi|294649011|ref|ZP_06726459.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC
19194]
gi|292825146|gb|EFF83901.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC
19194]
Length = 305
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 113/303 (37%), Positives = 164/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKG
Sbjct: 1 MKTLKIATRQSPLALWQAEHIRSRLNALY--PDLTVELVKFVTQGDKILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL
Sbjct: 59 LFVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK +L+ R D+ ++D RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 119 QGAKVGTSSLRRKCQILQQRPDLEIVDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G
Sbjct: 179 DRIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A L G V + DGK + G+ A +G AQ +
Sbjct: 239 GCQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQDLLDQGAG 298
Query: 303 NVF 305
+
Sbjct: 299 ELL 301
>gi|213971710|ref|ZP_03399816.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1]
gi|301386723|ref|ZP_07235141.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato Max13]
gi|302062167|ref|ZP_07253708.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato K40]
gi|302130377|ref|ZP_07256367.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213923528|gb|EEB57117.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1]
Length = 313
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDSADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|332139557|ref|YP_004425295.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549579|gb|AEA96297.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 312
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGK
Sbjct: 6 TTRTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L
Sbjct: 64 GLFIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDAL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RLK
Sbjct: 124 PEGAIVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLKM 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I+ L + P+ GQGA+ IE ++ + L++ +NH DT V ERA L+
Sbjct: 184 QSRIRMALPADISLPAVGQGAVGIECRNDDEELIALLQALNHADTHTRVTAERAMNERLE 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I FA L G+V DG S +R A ++G + A+ +
Sbjct: 244 GGCQVPIGSFATLDNDVLTLTGMVGKPDGSELLFASATASREKAKDMGIEVAEALLEQGA 303
Query: 302 KNVF 305
+
Sbjct: 304 GEIL 307
>gi|300115116|ref|YP_003761691.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113]
gi|299541053|gb|ADJ29370.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113]
Length = 314
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 166/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K RI TR S LAL A ++L H P ++ ++ +ST+GD+I + L +IG
Sbjct: 5 MSAKTCLRIATRKSLLALWQAEYVANTLR--HHYPDLSVELVRMSTQGDKILDTPLAKIG 62
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L
Sbjct: 63 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA AG+KRL
Sbjct: 123 SLPEGARLGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDGIILATAGLKRL 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A
Sbjct: 183 ELTHRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITLQAERALNAR 242
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ IAG+A + L +V DG G DA ++G + +
Sbjct: 243 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGDAESLGASLGEDLLRR 302
Query: 300 SNKNVF 305
+
Sbjct: 303 GADKIL 308
>gi|331018514|gb|EGH98570.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 313
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT + ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRLIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|251793296|ref|YP_003008024.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700]
gi|247534691|gb|ACS97937.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700]
Length = 308
Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K +I TR SPLAL A + L ++ P + ++P+ TKGD I + L +IGG
Sbjct: 1 MLEKTLKIATRQSPLALWQANYVKDCLQQLY--PDLIVELVPMVTKGDVILDSPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++ +
Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTFDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL
Sbjct: 119 LPQSAVVGTSSLRRQCQLKALRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I + +E P+ GQGA+ IE ++ + ++L+ + +T V ERA L
Sbjct: 179 LADRIASFIEVEQSLPAAGQGAVGIECRTDDVQVKQLLAPLADAETTCCVLAERAMNNHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + LY +V DG +A +G A+ +
Sbjct: 239 QGGCQVPIGGYAVLQQGQLYLRALVGNVDGSQIIRAEGKSAVKNADVLGVQIAEQLLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADKIL 303
>gi|254717954|ref|ZP_05179765.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|265982897|ref|ZP_06095632.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|306838958|ref|ZP_07471782.1| porphobilinogen deaminase [Brucella sp. NF 2653]
gi|264661489|gb|EEZ31750.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|306405961|gb|EFM62216.1| porphobilinogen deaminase [Brucella sp. NF 2653]
Length = 314
Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 142/305 (46%), Positives = 198/305 (64%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK
Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL
Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL
Sbjct: 127 PQGAIVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVGGTFLACAGLRRLGL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD
Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALD 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A +G L F G++L DG+ HEV+ DA +G DAA +R ++
Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEEAVSDAAALGTDAANRVRAMAG 306
Query: 302 KNVFN 306
+ F+
Sbjct: 307 PHFFD 311
>gi|256821394|ref|YP_003145357.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069]
gi|256794933|gb|ACV25589.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069]
Length = 311
Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 169/305 (55%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLA+ A +S L +H P + ++P++T+GD+I LT+IGG
Sbjct: 1 MSISTLRIATRQSPLAMWQAEYVQSRLQQLH--PDLTVELVPMTTQGDKILGTPLTKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P + +GL++ RED D F+S+ +L D
Sbjct: 59 KGLFVKELEQAMLEGRADIAVHSMKDVPYQFPEGLELKVICEREDPTDAFVSNKYHNLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRK LLR R D+ + D RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 119 LPCGANVGTSSLRRKIQLLRARPDLKITDLRGNVGTRLSKLDDGNYDAIVLASAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ E P+PGQGA+ IE N+P +++ + E T V ER L
Sbjct: 179 LEERIRSQFEPELMLPAPGQGAVGIEARTNDPDLDAILQPLQDETTSLRVLAERTITKTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
SC+ +A FA TL +V D + E S G DA+ IG +Q + +
Sbjct: 239 QASCQVPVAAFATINDDTLSLRALVGGVD-QQIIEASAEGPAQDALAIGHKVSQELLELG 297
Query: 301 NKNVF 305
+ +
Sbjct: 298 ARELI 302
>gi|90416175|ref|ZP_01224107.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207]
gi|90331900|gb|EAS47114.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207]
Length = 326
Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 162/304 (53%), Gaps = 4/304 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR SPLAL A ++ L++ H P ++ ++ ++T+GD + + L ++GGKGL
Sbjct: 18 QTIRIATRKSPLALWQAEFVKAKLLENH--PDLDVQLVAMTTRGDVLLDTPLAKVGGKGL 75
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E ++ D AVHS KD+P + GL ++ RED D F+S+ +L +L
Sbjct: 76 FVKELEVAMLENRADIAVHSMKDVPMEFPPGLGLTVICEREDPLDAFVSNRYANLAELPP 135
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+ + D+ + D RG + TRL KL+ AI+LA AG+ RL E
Sbjct: 136 GSVVGTSSLRRQCQIRAAFPDLQIKDLRGNVNTRLAKLDYGDYDAIILASAGLIRLGMEA 195
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I L E P+ GQGA+ IE +++ EL+K + H T V ERA L+G
Sbjct: 196 RIASRLESELCLPAGGQGAVGIECRLDDQATIELLKPLEHSQTRIRVTAERALNRRLEGG 255
Query: 244 CKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IA +A G +L G+V + DG + + + A +G + A+ +
Sbjct: 256 CQVPIACYAELDEAGESLQLRGLVGSVDGSLILQDQLSAPVAQAEQLGIELAERLLAAGA 315
Query: 302 KNVF 305
+
Sbjct: 316 GEIL 319
>gi|330965074|gb|EGH65334.1| porphobilinogen deaminase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 313
Score = 272 bits (694), Expect = 6e-71, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL
Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G ++ G+V G++ + A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVHVAEALLAQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAEIL 303
>gi|253699058|ref|YP_003020247.1| porphobilinogen deaminase [Geobacter sp. M21]
gi|259647798|sp|C6DYY8|HEM3_GEOSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|251773908|gb|ACT16489.1| porphobilinogen deaminase [Geobacter sp. M21]
Length = 318
Score = 272 bits (694), Expect = 6e-71, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEKRY--PDMTVTLTKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNNVKFA-D 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE +++N ++ + NH DT +V ERA L
Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNHPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F G L G + + DGK+ + G D +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVTGDELKLTGFIASVDGKVSVKGVVTGPADDCEKLGVKLAEQLLSEG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHAIL 302
>gi|254784450|ref|YP_003071878.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901]
gi|237686105|gb|ACR13369.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901]
Length = 324
Score = 272 bits (694), Expect = 6e-71, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LAL A +S L H P + ++PL+++GD+I + L ++GGKG
Sbjct: 15 KHTLRIATRKSALALWQAEFVKSELCRHH--PELAVELVPLTSRGDKILDVPLAKVGGKG 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ +I+GE D AVHS KD+P + +GL ++ RED RD +S+ +L +
Sbjct: 73 LFVKELEQAIIAGEADIAVHSMKDVPMEFPQGLGLAVICEREDPRDALVSNKYSNLDAIP 132
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR++ LL R D+ V RG + TRL KL+ + AI+LA AG+KRL+
Sbjct: 133 AGAVIGTSSLRRQSQLLAMRPDLEVTFLRGNVNTRLAKLDAGEYDAIILASAGLKRLQMV 192
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E + E P+ GQGA+ IE ++ + L++ ++H T +V ERA +L+G
Sbjct: 193 DRIAEFIAPEVMLPAGGQGAVGIECRTDDQETLALLQPLHHGVTEQAVLAERAMNRKLEG 252
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I GFA + + L+ G+V DG G+ DA +G A+ +
Sbjct: 253 GCQVPIGGFAIHQDNQLWVRGLVADPDGSEVLYDQVIGDPADAETLGVVLAEKLLAAGAD 312
Query: 303 NVF 305
+
Sbjct: 313 AIL 315
>gi|237809861|ref|YP_002894301.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187]
gi|237502122|gb|ACQ94715.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187]
Length = 308
Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A + L H P + ++P+ST+GD+I + L +IGG
Sbjct: 1 MTE--LRIATRKSPLALWQANFVKQQLELHH--PGLQVTLVPMSTQGDKILDTPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KD+P GL ++ R+D D F+S S+ +
Sbjct: 57 KGLFVKELEQAMLENRADIAVHSMKDVPVDFPDGLGLAVICERDDPYDAFVSSRFASVYE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG++RL
Sbjct: 117 LPEGAVVGTSSLRRQCQLRAQRPDLVIRDLRGNVNTRLAKLDAGDYDAIILAAAGLRRLD 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K + I+ L E P+ GQGA+ IE + + + L+ + H T V ERA L
Sbjct: 177 KAERIRSRLPPELSLPANGQGAVGIECRLGDTQTLALLASLEHATTRYCVMAERAMNRTL 236
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C+ I FA L+ G+V + DGK +G + A +G+ A+ +
Sbjct: 237 QGGCQVPIGAFAEMQDNDHLWLRGLVGSVDGKQIIHGDISGPKEQAEELGKLLAEQLLVQ 296
Query: 300 SNKNVF 305
++
Sbjct: 297 GADDIL 302
>gi|119484355|ref|ZP_01618972.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
gi|119457829|gb|EAW38952.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
Length = 321
Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + ++ L P + +ST+GD+I + L +IG KG
Sbjct: 8 TRTVRIGSRKSQLALVQTYWVQAELKK--HFPDIEFEVHTMSTQGDKILDVALAKIGDKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E +++ + D AVHS KD+PT L +GL + RE+ D + H + L+
Sbjct: 66 LFTKELEVGMLNHDTDIAVHSLKDLPTNLPEGLMLGCVTERENPADALVVHERHKDKQLE 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L + D RG + TRL KL+ AI+LA AG+KRL
Sbjct: 126 TLPQGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLEKLDEGGYDAIILAVAGLKRL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I + ++ + + GQGA+ IE + E++KV+ H T + ERAFL E
Sbjct: 186 GMGDRIHQTISPDVSLHAVGQGALGIECRDGDENILEILKVLEHTPTAQRCHAERAFLRE 245
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I + + + L G+V + DGK + +G +A +G D A +R
Sbjct: 246 LEGGCQVPIGVNSEVENNQLTLIGMVASLDGKRLIRDTVSGETTNAEQLGIDLAHRLREQ 305
Query: 300 SNKNVFN 306
K + +
Sbjct: 306 GAKEILD 312
>gi|238756296|ref|ZP_04617611.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473]
gi|238705502|gb|EEP97904.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473]
Length = 315
Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H + ++P+ T+GD I + L ++GG
Sbjct: 3 MSDKIIRIATRQSPLAMWQAHYVQQLLQTCHS--GLKVELVPMVTRGDIILDTPLAKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + R+D RD F+S+ Q + D
Sbjct: 61 KGLFVKELELALLEDRADIAVHSMKDVPIAFPQGLGLVTICERDDPRDAFVSNNYQRMDD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L + R D+ V D RG + TRL+KL+ AI+LA AG+ RL
Sbjct: 121 LPAGSIVGTSSLRRQCQLRQRRPDLIVKDLRGNVGTRLSKLDQGDYDAIILAVAGLNRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L
Sbjct: 181 LKDRIRYAMSPEESLPAVGQGAVGIECRLDDNLTRALLAPLNHRPTELRVCAERAMNTRL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + TL+ +V A DG R G A +G + A +
Sbjct: 241 EGGCQVPIGSYAILEDDTLWLRALVGAPDGSQMICGERRGPATHAEQMGIELADELLSRG 300
Query: 301 NKNVF 305
K +
Sbjct: 301 AKAIL 305
>gi|92115224|ref|YP_575152.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043]
gi|91798314|gb|ABE60453.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043]
Length = 311
Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats.
Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR S LAL A ++ L+ +H P + ++ ++T+GD+I + L ++GGKG
Sbjct: 1 MQTLRIATRQSRLALWQAEHVKARLLALH--PGLEVELVAMTTRGDKILDSPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ L+ G D AVHS KD+P +GL +S L D F+S+ SL L
Sbjct: 59 LFVKELEEALLDGRADIAVHSMKDVPMHFPEGLGLSVILESGAPTDAFVSNDYASLDALP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+GTSSLRR + R D+ V++ RG ++TRL KL+ + AI+LA +G++RL+
Sbjct: 119 EGVRVGTSSLRRGLQVKEARPDLEVLNLRGNVQTRLGKLDGGEFEAIILATSGLQRLELG 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + L E P+ GQGA+ IE ++ EL+ ++H T V ERA LDG
Sbjct: 179 HRITQELPPEVSLPACGQGALGIECRHDDESLLELLAPLDHPQTATRVRAERAMNTRLDG 238
Query: 243 SCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ I G+A + TL+ +V DG G+ + +G A+ +
Sbjct: 239 GCQVPIGGYAVLEDGDRTLWLRALVGDPDGSRVLRAEGRGSADEPEALGVRIAESLLDQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 AGDIL 303
>gi|262375167|ref|ZP_06068401.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145]
gi|262310180|gb|EEY91309.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145]
Length = 310
Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 172/306 (56%), Gaps = 3/306 (0%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M+ K +I TR SPLAL A R+ L D+H + ++ T+GD+I + L +IG
Sbjct: 1 MKFMKTLKIATRQSPLALWQAEHIRARLQDLHA--GLQVELVTFVTQGDKILDTPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+T S +
Sbjct: 59 GKGLFVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNTYTSFE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 ELPQGAKVGTSSLRRKTQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I+ L E P+ GQGA+ +E ++ +L++ + H DT V ERAF A
Sbjct: 179 GLAERIRHTLTPEVSLPAVGQGALGLECRTHDQTVLDLIQPLLHADTDACVRAERAFNAY 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAG+A K + G V + DG + + G DA +G A+ +
Sbjct: 239 LEGGCQVPIAGYATLKEGVISIEGRVGSIDGAVLLRAQQTGKTADAEQLGVKLAKDLLDQ 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAGELL 304
>gi|226951768|ref|ZP_03822232.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244]
gi|226837483|gb|EEH69866.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244]
Length = 305
Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 114/303 (37%), Positives = 164/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKG
Sbjct: 1 MKTLKIATRQSPLALWQAEHIRSRLNTLY--PDLTVELVKFVTQGDKILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL
Sbjct: 59 LFVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL
Sbjct: 119 QGAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G
Sbjct: 179 DRIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A L G V + DGK + G+ A +G AQ +
Sbjct: 239 GCQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQDLLDQGAG 298
Query: 303 NVF 305
+
Sbjct: 299 ELL 301
>gi|496214|gb|AAA18907.1| porophorbilinogen deaminase [Pseudomonas aeruginosa]
Length = 314
Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 111/307 (36%), Positives = 165/307 (53%), Gaps = 3/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + RI TR S LAL A S+ L H P + ++P++++GD++ + L +IG
Sbjct: 1 MSSREIRIATRQSALALWQAEYVNSTGLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 GKGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L SV+GTS L R+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 QLPAGSVVGTSRLGRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGVIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA
Sbjct: 179 GFESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IA +A +G L+ G+V DG DA +G A+ +
Sbjct: 239 LNGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLADAEALGVRVAEDLLEQ 298
Query: 300 SNKNVFN 306
+ +
Sbjct: 299 GAEAILE 305
>gi|77164030|ref|YP_342555.1| porphobilinogen deaminase [Nitrosococcus oceani ATCC 19707]
gi|76882344|gb|ABA57025.1| hydroxymethylbilane synthase [Nitrosococcus oceani ATCC 19707]
Length = 310
Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IG
Sbjct: 1 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L
Sbjct: 59 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL
Sbjct: 119 SLPEGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A
Sbjct: 179 ELTQRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNAR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ IAG+A + L +V DG G +A ++G + +
Sbjct: 239 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGEAESLGASLGEDLLRR 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GADKIL 304
>gi|254435152|ref|ZP_05048659.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27]
gi|207088263|gb|EDZ65535.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27]
Length = 314
Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IG
Sbjct: 5 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIG 62
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L
Sbjct: 63 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL
Sbjct: 123 SLPEGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRL 182
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A
Sbjct: 183 ELTQRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNAR 242
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C+ IAG+A + L +V DG G +A ++G + +
Sbjct: 243 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGEAESLGASLGEDLLRR 302
Query: 300 SNKNVF 305
+
Sbjct: 303 GADKIL 308
>gi|254424552|ref|ZP_05038270.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335]
gi|196192041|gb|EDX87005.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335]
Length = 319
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 159/307 (51%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL ++ L P + + T+GD+I + L++IG KG
Sbjct: 7 TRTIRIGSRKSQLALVQTHWVQAELSKA--FPDITFEVSTMETQGDKILDVALSKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E ++S +D AVHS KD+PT+L +GL + RED D + H + L
Sbjct: 65 LFTQELEDDMLSHRVDFAVHSLKDLPTQLPEGLMLGCVTEREDPADALVVHEKHKDKQLD 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHFQFKDIRGNVNTRLRKLDEGEYDAIVLAAAGLNRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I ++L E + GQGA+ IE + ++K + H T ERAFL E
Sbjct: 185 DMSDRIHQLLPAEISLHAVGQGALGIECRSGDEDILTVIKALEHLPTAQRCYAERAFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G TL GIV + DG+ + + G DA ++G++ A+ +R
Sbjct: 245 LEGGCQVPIGVNTRIEGDTLTLVGIVASLDGQQLIKDTVQGAPADAESMGKELAERLREQ 304
Query: 300 SNKNVFN 306
+ + +
Sbjct: 305 GAQKILD 311
>gi|167031229|ref|YP_001666460.1| porphobilinogen deaminase [Pseudomonas putida GB-1]
gi|189028150|sp|B0KH05|HEM3_PSEPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166857717|gb|ABY96124.1| porphobilinogen deaminase [Pseudomonas putida GB-1]
Length = 313
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHADTADRVVAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRTAAETLGVQVAEDLLSQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|220910316|ref|YP_002485627.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425]
gi|219866927|gb|ACL47266.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425]
Length = 322
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L P + + +ST+GD+I + L +IG K
Sbjct: 8 SSRTIRIGSRKSQLALVQTYWVQEQLQK--HFPDRSFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
GLFT+E+E+ ++S E D AVHS KD+PT L GL + RE+ D + + +
Sbjct: 66 GLFTKELEQGMLSQETDFAVHSLKDLPTHLPDGLILGCITERENPADALVMNEKYRDRPL 125
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++R
Sbjct: 126 ETLPEGAVIGTSSLRRLAQLRHYFPHLTFKDVRGNVNTRLAKLDAGEYDALVLAVAGLQR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +IL E + GQGA+ IE ++P+ L+K + H+ T ERAFL
Sbjct: 186 LGFSDRIHQILPPEISLHAVGQGALGIECRSDDPEVLSLIKALEHQPTAWRCLAERAFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I +G L G+V + DG+ + G A +G + AQ +R
Sbjct: 246 ELEGGCQVPIGVNTQLEGDQLTLTGLVASLDGQRLIKDQITGAATTAEQMGTELAQRLRQ 305
Query: 299 ISNKNVF 305
+ +
Sbjct: 306 QGAEEIL 312
>gi|209526164|ref|ZP_03274695.1| porphobilinogen deaminase [Arthrospira maxima CS-328]
gi|209493420|gb|EDZ93744.1| porphobilinogen deaminase [Arthrospira maxima CS-328]
Length = 322
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 159/307 (51%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RI +R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + +H + L
Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ E + GQGA+ +E + + E+VK + H T + ERAFL
Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGLECREGDTEIFEVVKALEHTVTAQRCHSERAFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I +G L G+V + DGK + + G DA +G A ++
Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIQLAHKLKQ 305
Query: 299 ISNKNVF 305
+ +
Sbjct: 306 QGAEEIL 312
>gi|307546845|ref|YP_003899324.1| porphobilinogen deaminase [Halomonas elongata DSM 2581]
gi|307218869|emb|CBV44139.1| porphobilinogen deaminase [Halomonas elongata DSM 2581]
Length = 380
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RI TR S LA+ A R LM+VH P + ++ LST+GD+I + L ++GGKG
Sbjct: 71 MQTLRIATRKSQLAMWQAEHVRDRLMEVH--PELTVELVALSTRGDQILDTPLAKVGGKG 128
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ ++ G D AVHS KD+P + + L +S L + D F+S+ SL +L
Sbjct: 129 LFVKELEEAMLDGRADIAVHSMKDVPMQFPESLGLSVILAGAEPTDAFVSNQYASLDELP 188
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRR + R D+ V++ RG ++TRL KL+N + AILLA AG+KRL E
Sbjct: 189 EGARIGTSSLRRGLQMRERRPDLEVLNLRGNVQTRLGKLDNGEFDAILLATAGLKRLGLE 248
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + L E P+ GQGA+ IE +++ + L+ ++ DT V ERA L+G
Sbjct: 249 ERITQELPPEICLPACGQGALGIECRMHDAELIGLLAPLDDPDTATRVRAERAMNTRLEG 308
Query: 243 SCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ IAG A + TL+ +V +G G+ + +G A+ +
Sbjct: 309 GCQVPIAGHAVFENDGQTLWLRALVGNPEGTEVLRAEGRGSIHEPEALGIRVAEELLDQG 368
Query: 301 NKNVF 305
++
Sbjct: 369 AGDIL 373
>gi|126725997|ref|ZP_01741839.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150]
gi|126705201|gb|EBA04292.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150]
Length = 313
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 131/311 (42%), Positives = 183/311 (58%), Gaps = 4/311 (1%)
Query: 1 MEK----KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56
M+K P +IGTR SPLALA A ETR L H + P I+ + T GD + +R L
Sbjct: 1 MKKFTPQSPLKIGTRGSPLALAQAHETRDRLSKAHNLAPEAFEIVVIKTTGDIVQDRPLK 60
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
EIGGKGLFT+EIE+ ++SG+ID AVHS KDMP + GL I+ YLPRED+RD F+S +A
Sbjct: 61 EIGGKGLFTKEIEEAMLSGDIDIAVHSMKDMPVEQPDGLAITCYLPREDVRDAFVSLSAD 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
S DL + +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+
Sbjct: 121 SFDDLRQGATVGSSSLRRRAQLAHRRPDLNLVEFRGNVQTRMRKLGDGVADATFLAMAGL 180
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL V + L + F P+ QGAI IE + + E++ I+ + T D + ERAF
Sbjct: 181 IRLGMSDVARLPLETDVFLPAVAQGAIGIEQRIGDSVISEMLTAIHDQHTGDLLAAERAF 240
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
LA ++GSC++ IAG A L+F +L DG + +G D IGR A +
Sbjct: 241 LARVEGSCQTPIAGLAEIIDGKLHFRAEILRPDGSEAITGAASGEIADGAAIGRQVADDL 300
Query: 297 RFISNKNVFNF 307
+ F +
Sbjct: 301 LARAPTGFFEW 311
>gi|126666605|ref|ZP_01737583.1| porphobilinogen deaminase [Marinobacter sp. ELB17]
gi|126628993|gb|EAZ99612.1| porphobilinogen deaminase [Marinobacter sp. ELB17]
Length = 313
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L +H + ++ + T GD+I + L ++GG
Sbjct: 1 MSARNLRIATRSSALALWQAEFIKAELERLHS--NVTVELVKIKTLGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ G D AVHS KD+P +GL + A R+D D FIS+ SL D
Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMAFPEGLGLVAICERDDPTDAFISNHFSSLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L++V+GTSSLRR++ L R D+ + RG + TRL KL+ AI+LA +G+KRL
Sbjct: 119 LPLNAVVGTSSLRRESQLRANRPDLQIRVLRGNVNTRLAKLDAGNYDAIILASSGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ + P+ GQGA+ IE +++ + + +++ +NH D+ D V ERA L
Sbjct: 179 FEARIRNCMPDTLSLPAVGQGALGIECRLDDQELRAMLEPLNHTDSADRVKAERALNTRL 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA +A + L+ G+V A DG + +R + +GR+ A+ +
Sbjct: 239 NGGCQVPIAAYALLEDNDMLWLRGLVGAVDGSLIFRAEGRVHRSEGERLGRELAEDLLAQ 298
Query: 300 SNKNVF 305
V
Sbjct: 299 GADKVL 304
>gi|221640136|ref|YP_002526398.1| porphobilinogen deaminase [Rhodobacter sphaeroides KD131]
gi|221160917|gb|ACM01897.1| Porphobilinogen deaminase [Rhodobacter sphaeroides KD131]
Length = 310
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 7 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 67 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 126
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V
Sbjct: 127 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC
Sbjct: 187 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 246
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 247 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 306
Query: 305 FNF 307
F++
Sbjct: 307 FSW 309
>gi|146305321|ref|YP_001185786.1| porphobilinogen deaminase [Pseudomonas mendocina ymp]
gi|145573522|gb|ABP83054.1| hydroxymethylbilane synthase [Pseudomonas mendocina ymp]
Length = 312
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 163/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL
Sbjct: 3 REIRIATRKSALALWQAEYVKARLEQAH--PGLLVSLVPMVSRGDKLLDAPLAKIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L
Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL +
Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFQD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ ++ ED P+ GQGA+ IE + + L+ ++H +T V ERA L+G
Sbjct: 181 RIRSSISAEDSLPAGGQGAVGIECRSADAEIHALLAPLHHRETALRVTAERALNKRLNGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ IA +A + L+ G+V DG + DA +G A+ + +
Sbjct: 241 CQVPIACYALLENDQLWLRGLVGQPDGGLLLRAEHRAASSDAEALGVRVAEALLAQGAEA 300
Query: 304 VF 305
+
Sbjct: 301 IL 302
>gi|90023307|ref|YP_529134.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40]
gi|89952907|gb|ABD82922.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40]
Length = 308
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR S LAL A + ++ L ++ P + + PL ++GD+I + L ++GGKG
Sbjct: 1 MKKIRIATRKSELALWQANDVKAKLEALY--PSLEVELFPLVSRGDKILDVPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L++ E D AVHS KD+P + +GL+++ L RED RD ++S ++L L
Sbjct: 59 LFVKELEHALLADEADIAVHSMKDVPMEFPEGLELAVILEREDPRDAWVSAGYENLDALP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
V+GTSSLRR++ +L R DI+V RG + TRL KL+ + AI+LA AG+KRLK
Sbjct: 119 AGGVVGTSSLRRQSQILARRPDITVKFLRGNVNTRLAKLDAGEYDAIILAAAGLKRLKFG 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ L+ E+ P+ GQGA+ IE + + +L++ ++H T + V ERA L+G
Sbjct: 179 DRIRSYLSPEESLPAGGQGAVGIECRSADSETLKLLQALHHTITAEQVLAERAMNRRLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I FA + + L+ G+V DG G D +G + A+ +
Sbjct: 239 GCQVPIGCFAVHQNNQLWLRGLVADPDGSKVIYDEMTGAAADGEKMGVELAEKLLAAGAD 298
Query: 303 NVF 305
+
Sbjct: 299 KIL 301
>gi|332559141|ref|ZP_08413463.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N]
gi|332276853|gb|EGJ22168.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N]
Length = 310
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 184/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 7 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 67 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFADGGLADLPQG 126
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK ++V
Sbjct: 127 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDEV 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC
Sbjct: 187 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVRTGHRLAAERSFLLKLDGSC 246
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 247 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 306
Query: 305 FNF 307
F++
Sbjct: 307 FSW 309
>gi|301155139|emb|CBW14603.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae T3T1]
Length = 310
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL
Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL +L
Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDELPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+ L + R D+ + RG + TRL+KL+N++ AI+LA AG+ RL +
Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNSEYDAIILASAGLIRLGLAE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G
Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I G+A + ++ +V +DG +A +G A+ +
Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGEADGSAIIRAEGKSAVENAEALGVTIAEQLLAQGADK 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|284053907|ref|ZP_06384117.1| porphobilinogen deaminase [Arthrospira platensis str. Paraca]
Length = 322
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + RI +R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + +H + L
Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ E + GQGA+ IE + + E+VK + H T + ERAFL
Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGIECREGDTEILEVVKALEHTATAQRCHSERAFLR 245
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I +G L G+V + DGK + + G DA +G + A ++
Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIELANQLKQ 305
Query: 299 ISNKNVF 305
+ +
Sbjct: 306 QGAEEIL 312
>gi|152997593|ref|YP_001342428.1| porphobilinogen deaminase [Marinomonas sp. MWYL1]
gi|150838517|gb|ABR72493.1| porphobilinogen deaminase [Marinomonas sp. MWYL1]
Length = 326
Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A ++ L ++ P + ++ ++TKGD+I + L++IGGKG
Sbjct: 19 KDKIVIATRESQLALWQANNIKAQLESLY--PDMKVELLGMTTKGDQILDSPLSKIGGKG 76
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L G D AVHS KD+P +GL ++ RED D F+S+ +SL L
Sbjct: 77 LFVKELENALTEGLADIAVHSMKDVPMAFPEGLGLAVICEREDPHDAFVSNKVESLDQLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR L R D+ + D RG + TRL K+++ + AI+LA AG+ RL+
Sbjct: 137 SGAIVGTSSLRRSCQLRMKRPDLIIKDLRGNVNTRLKKMDDGEYDAIILATAGLVRLEML 196
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I++ + E P+ GQGA+ IE ++ + L+ + HE+T V ERA L+G
Sbjct: 197 DRIRQRIPAETSLPAGGQGAMGIECRSDDIQTINLLAPLQHEETAIRVTAERAVNERLNG 256
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C++ IA FA + TL+ G+V + DGK E G++ DA ++G A +
Sbjct: 257 GCQAPIACFAILENDTLWLRGLVGSPDGKTMIEGEIRGHKDDAKSLGVQLADDLLARGAD 316
Query: 303 NVFN 306
+ N
Sbjct: 317 IILN 320
>gi|118592006|ref|ZP_01549400.1| porphobilinogen deaminase [Stappia aggregata IAM 12614]
gi|118435302|gb|EAV41949.1| porphobilinogen deaminase [Stappia aggregata IAM 12614]
Length = 303
Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 143/299 (47%), Positives = 195/299 (65%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A ETR LM H + + I+ + T GDRI +R L+E+GGKGLFT
Sbjct: 1 MRIGTRGSALALAQAHETRDRLMAAHGLAEDSFEIVVIKTSGDRIQDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L DL +
Sbjct: 61 KEIEEALLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLTDLPHGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL A LLA AG++RL E I
Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGAVDATLLAAAGLRRLGLEAEI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L + F P+ GQGAICIE+ ++ E++ I+ E T ++ ERAFLA LDGSC+
Sbjct: 181 TSLLETDQFLPAVGQGAICIESRADDTATLEMLAAIHDEATQIRLDAERAFLAVLDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I G A G TL+F GIVL DG HE + +G + DA+ IGR + ++ +
Sbjct: 241 TPIGGLATLDGDTLHFRGIVLKPDGSEVHEATASGLKSDAVQIGRSVGEDLKSCMGPDF 299
>gi|126463094|ref|YP_001044208.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029]
gi|126104758|gb|ABN77436.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029]
Length = 322
Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 19 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 79 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V
Sbjct: 139 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC
Sbjct: 199 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 259 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGVELASELLGRAPADF 318
Query: 305 FNF 307
F++
Sbjct: 319 FSW 321
>gi|116750623|ref|YP_847310.1| porphobilinogen deaminase [Syntrophobacter fumaroxidans MPOB]
gi|158512355|sp|A0LN73|HEM3_SYNFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|116699687|gb|ABK18875.1| hydroxymethylbilane synthase [Syntrophobacter fumaroxidans MPOB]
Length = 309
Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR S LAL + ++++ + P + + + T GD+I + L ++GG
Sbjct: 1 MTDRVIRIGTRGSMLALKQSGNVKAAMEAL--WPGLRVELQVVRTTGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE L++ +D AVHS KD+P L +GL+I A RED RDV ++ T + + D
Sbjct: 59 KGLFVKEIEDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIAD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + + + R DI + + RG IETRL KL AI+LA AG+ R+
Sbjct: 119 LPMGGRVGTSSLRRASQIRKLRPDIEIANLRGNIETRLRKLTEGAFDAIILAAAGLHRMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + L+ DF P+ GQGAI IE ++ + +EL+ ++ DT +V ER+ L L
Sbjct: 179 WQNRVTSYLDPADFLPAIGQGAIGIELRCDDGEVRELLAPLHDPDTHVAVEAERSLLRTL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I G A+ TL G+V + DG+ SR G+ A IGRD +
Sbjct: 239 EGGCQVPIGGHAHLVDGTLTLSGMVASIDGEELFRASRAGSPAQARKIGRDVGMELLDSG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 ARRILE 304
>gi|325272336|ref|ZP_08138739.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51]
gi|324102530|gb|EGB99973.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51]
Length = 313
Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PELRVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNHFASLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITATISVDDSLPAGGQGAVGIECRSADHAIHALLAPLHHHDTADRVVAERAMNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G + A+++
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRATAEALGVEVAEHLLGQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|189423573|ref|YP_001950750.1| porphobilinogen deaminase [Geobacter lovleyi SZ]
gi|238058916|sp|B3E2H7|HEM3_GEOLS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189419832|gb|ACD94230.1| porphobilinogen deaminase [Geobacter lovleyi SZ]
Length = 312
Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 171/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A T+S L + P + ++ + T GD+I + L ++GG
Sbjct: 1 MAPKRLRIGTRASQLALWQANWTKSELEARY--PGIQVELVKIKTMGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS +
Sbjct: 59 KGLFVKEIEEAMLRGEIDLAVHSMKDVPTEFPEGLGLVVTTKREDPRDAFISDKVTFS-E 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL
Sbjct: 118 LRQGARIGTSALRRQAQLLKARPDLEMVIIRGNVETRIRKLKEDNLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V+ E+L+ + P+ GQGA+ +E +++ E + +NH DT +V ERA L
Sbjct: 178 FTDVVTELLDTDFSIPAIGQGALGLECRLDDNATIEALAFLNHADTAAAVAAERALLKRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA G TL G + + DGK +G+ DA+ +G + A +
Sbjct: 238 EGGCQVPIAAHGTVSGDTLTLVGFIASVDGKQTVRDRISGSTADAVKLGTELADRLLAAG 297
Query: 301 NKNVFN 306
K +
Sbjct: 298 GKAILE 303
>gi|197116806|ref|YP_002137233.1| porphobilinogen deaminase [Geobacter bemidjiensis Bem]
gi|226706286|sp|B5EBG8|HEM3_GEOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|197086166|gb|ACH37437.1| hydroxymethylbilane synthase [Geobacter bemidjiensis Bem]
Length = 318
Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG
Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEKRY--PDMTVTLTKIKTIGDKILDVPLAQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D
Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNGVKFA-D 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL
Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L + P+ GQGA+ IE +++N ++ + N DT +V ERA L
Sbjct: 178 FADQITEMLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNSPDTSRAVRAERALLWRC 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA F G L G + + DGK+ + G D +G A+ +
Sbjct: 238 EGGCQVPIAAFGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADDCEKLGVKLAEQLLSEG 297
Query: 301 NKNVF 305
+
Sbjct: 298 GHAIL 302
>gi|149204076|ref|ZP_01881044.1| porphobilinogen deaminase [Roseovarius sp. TM1035]
gi|149142518|gb|EDM30563.1| porphobilinogen deaminase [Roseovarius sp. TM1035]
Length = 315
Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 184/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEAFEIVVIKTTGDQIIDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ +++G+ID AVHS KDMP +GL + YLPRED+RD F+S T SL DL
Sbjct: 71 TREIEQAMLTGDIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPTVASLADLPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V
Sbjct: 131 SLVGTSSLRRKAQVLVAYPHLEVVEFRGNVQTRLKKLEDGVAACTFLAMAGLNRLGRSEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC
Sbjct: 191 ATCAIDADVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A GSTL G +L DG ++ D +GR A + +
Sbjct: 251 ETPIAGLAELNGSTLRLRGEILRPDGSESLTDDQSAPIEDGAELGRAMAAKLLAQAGPGF 310
Query: 305 FNF 307
F++
Sbjct: 311 FDW 313
>gi|326796191|ref|YP_004314011.1| porphobilinogen deaminase [Marinomonas mediterranea MMB-1]
gi|326546955|gb|ADZ92175.1| Porphobilinogen deaminase [Marinomonas mediterranea MMB-1]
Length = 308
Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K I TR S LAL A + L ++ P + ++ ++TKGD+I + L++IGGK
Sbjct: 1 MKDKIVIATRESKLALWQANTVKKQLETLY--PNLTVELLGMTTKGDQILDSPLSKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P KGL ++ RED D F+S+ SL +L
Sbjct: 59 GLFVKELESALLDGRADIAVHSMKDVPMAFPKGLGLAVICEREDPSDAFVSNKYSSLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSSLRR + + R D+ + RG + TRL KL+NN+ AI+LA AG+ RL+
Sbjct: 119 PKGSVLGTSSLRRACQIQQHRPDLKIESLRGNVGTRLGKLDNNEYDAIILATAGLIRLEL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK L+ P+ GQGA+ IE N+ EL+ + H+DT+ V ERA L+
Sbjct: 179 EDRIKSRLSDTYCLPAGGQGAMGIECRDNDKDILELLAPLQHQDTYYRVTAERAVNKRLN 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C++ IA FA ++ G+V ++DG+ G +A +G A+ +
Sbjct: 239 GGCQAPIACFATLSDGEIWLRGLVGSTDGQQMITGDIKGAPQNAEQLGITLAEDLLNRGA 298
Query: 302 KNVFN 306
+ + +
Sbjct: 299 QRILD 303
>gi|86359485|ref|YP_471377.1| porphobilinogen deaminase [Rhizobium etli CFN 42]
gi|86283587|gb|ABC92650.1| porphobilinogen deaminase protein [Rhizobium etli CFN 42]
Length = 309
Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 166/306 (54%), Positives = 216/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H + I+ L+TKGDRIT+R L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHNLSEEMFEIVVLTTKGDRITDRPLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D
Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL+ + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGSVETRLRKLDEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +VI ++L+ + FPP+P QGAICIE+ V + K +L+ +N T+DSV+CERAFLA L
Sbjct: 181 KVEVITDVLDPDTFPPAPAQGAICIESRVGDTKIDDLLAAVNDATTFDSVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|329898164|ref|ZP_08272361.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088]
gi|328920873|gb|EGG28310.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088]
Length = 307
Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 162/301 (53%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR SPLAL A + +L H P + ++ ++++GD++ + L +IGGKGLF
Sbjct: 3 KIVIATRESPLALWQAHYVKDALEMAH--PGLAVELLGMTSRGDQLLDSPLAKIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+ G D AVHS KD+P +GL + RE D F+S+T +S+ L
Sbjct: 61 VKELETALLEGRADIAVHSMKDVPMSFPEGLCLGPICEREAPNDAFVSNTYESIDALPKG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GTSSLRR+ L +R D+ V RG + TRL KL++ + AI+LA AG+ E
Sbjct: 121 AIVGTSSLRRECQLRSYRPDLVVNFLRGNVNTRLAKLDDGQYDAIILAAAGLILFGFEDR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L E P+ GQGA+ IE ++ ++L++V++H T V ERA L+G C
Sbjct: 181 IRSRLTPEQSLPAGGQGAVGIELRSDDEPTRDLIQVLHHPKTAAEVTAERALNQTLNGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IA F +G TL+ G+V A DG G DA +G+ A + + +
Sbjct: 241 QVPIAAFCVTEGDTLWLRGLVGAVDGSSILRAEARGKVEDAEVLGQQVANELLNQGAEAI 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|85705298|ref|ZP_01036397.1| porphobilinogen deaminase [Roseovarius sp. 217]
gi|85670171|gb|EAQ25033.1| porphobilinogen deaminase [Roseovarius sp. 217]
Length = 315
Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 134/313 (42%), Positives = 186/313 (59%), Gaps = 6/313 (1%)
Query: 1 MEKK------PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54
M + P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R
Sbjct: 1 MTRNLPTPSHPLKIGTRGSPLALAQAFETRARLGAAFDLPEEVFEIVVIKTTGDQIIDRP 60
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
L EIGGKGLFT EIE+ L++GEID AVHS KDMP +GL + YLPRED+RD F+S
Sbjct: 61 LKEIGGKGLFTREIEQALLTGEIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPL 120
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
SL DL +++GTSSLRRKA +L + V++FRG ++TRL KL + A LA A
Sbjct: 121 VGSLADLPAGALVGTSSLRRKAQVLVAYPHLQVVEFRGNVQTRLKKLADGVATCTFLAMA 180
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ RL + +V ++ E P+ QGAI IE ++ +A E++ I+H++T + ER
Sbjct: 181 GLNRLGRSEVATGAIDPEVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSER 240
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
AFLA LDGSC++ IAG A G+TL G +L DG ++ D ++GR A
Sbjct: 241 AFLAALDGSCETPIAGLAELNGNTLRLRGEILRPDGSESLTDDQSAPIEDGADLGRAMAA 300
Query: 295 YIRFISNKNVFNF 307
+ + F++
Sbjct: 301 KLLAQAGPGFFDW 313
>gi|328541997|ref|YP_004302106.1| Porphobilinogen deaminase [polymorphum gilvum SL003B-26A1]
gi|326411747|gb|ADZ68810.1| Porphobilinogen deaminase [Polymorphum gilvum SL003B-26A1]
Length = 302
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 143/300 (47%), Positives = 193/300 (64%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A ETR+ LM H + I+ + T GDRI +R L+E+GGKGLFT
Sbjct: 1 MRIGTRGSALALAQAHETRARLMAAHGLAEDAFEIVVIKTSGDRILDRPLSEVGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A+ L DL +
Sbjct: 61 KEIEEALLDDRIDLAVHSSKDMPTLLPDGLALTAFLPREDVRDAFVSPKAKMLMDLPQGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL V+
Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNVQTRLQKLEDGAVDATLLAYAGLRRLGLADVV 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+ + F P+ GQGAICIE+ V + L+ I+ +T + ERAFLAELDGSC+
Sbjct: 181 TSLLDTDAFLPAVGQGAICIESRVEDAATLGLLAAIHDRETEIRLTAERAFLAELDGSCR 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ I G A G L GI+L DG HE++R G DA IGR+A + ++ F
Sbjct: 241 TPIGGLARIDGDRLSLAGIILRPDGSEAHEIAREGAVADAEAIGREAGRTLKAAGGPGFF 300
>gi|163782608|ref|ZP_02177605.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882181|gb|EDP75688.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 303
Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats.
Identities = 111/300 (37%), Positives = 165/300 (55%), Gaps = 5/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A +S L + ++ ++T GD+I + L +IGGKGLF
Sbjct: 3 VRIGTRKSKLALWQANFVKSFLEKKW---GVEVELVKITTTGDKILDSPLAKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G ID AVHS KD+P + +GL + A RE+ DV +S L +L +
Sbjct: 60 KEIEQALMEGRIDLAVHSLKDVPMVIPEGLTLGAITEREEPHDVLLSRDGGKLLELREGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ L R R D+ V RG ++TR+ KL AI+LAYAG+KR+ E +
Sbjct: 120 KVGTSSLRRQVQLKRLRRDLEVEVLRGNVDTRVRKLKEGMYDAIILAYAGVKRMGYEDEV 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ ++ F P+ GQG++ IE + + L++ +NH ++ CERAFL L+G C+
Sbjct: 180 TEV--LDYFIPAVGQGSLAIEIREGDEETLRLIEPLNHPESRVRAECERAFLRRLEGGCQ 237
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I FA KG+TL G + +G F E G +A +G A+ + + +
Sbjct: 238 VPIGAFAQVKGNTLTVRGFISDLEGLKFIEGEEVGKPEEASELGERLAESLLQQGGERIL 297
>gi|75910970|ref|YP_325266.1| porphobilinogen deaminase [Anabaena variabilis ATCC 29413]
gi|75704695|gb|ABA24371.1| hydroxymethylbilane synthase [Anabaena variabilis ATCC 29413]
Length = 336
Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 165/307 (53%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG
Sbjct: 22 RRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDKG 79
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 80 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQID 139
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++RL
Sbjct: 140 TLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRL 199
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I ++L E + GQGA+ IE N+ + ++K I H T D ER+FL
Sbjct: 200 GMGDRIHQVLPKEVSLHAVGQGALGIECRANDAELITILKAIEHPQTRDRCLAERSFLRS 259
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G L G+V + DG+ + + +G+ DA IG A+ +R
Sbjct: 260 LEGGCQVPIGVNTEINGDELILTGVVASVDGQNLVKDTVSGDASDAEAIGIRLAELLREQ 319
Query: 300 SNKNVFN 306
+ + N
Sbjct: 320 GAQEILN 326
>gi|83952840|ref|ZP_00961570.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM]
gi|83835975|gb|EAP75274.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM]
Length = 304
Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats.
Identities = 131/302 (43%), Positives = 183/302 (60%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR SPLALA A+ETR L+ +P I+ ++T GDR+ +R L EIGGKGLFT
Sbjct: 1 MKIGTRGSPLALAQAYETRDRLVAAFDLPETAFEIVIITTTGDRVIDRPLKEIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE L++G+ID AVHS KDMP +GL I YLPRED+RD FI T ++L ++A +
Sbjct: 61 REIEDALLTGDIDLAVHSMKDMPVLQPEGLIIDCYLPREDVRDAFICPTGRNLSEMAPGT 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+A +L + V++FRG ++TRL KL+ A LA AG+ RLK+ +VI
Sbjct: 121 KVGSSSLRRRAQVLVAHPQLEVVEFRGNVQTRLRKLDEGVAACTFLAMAGLNRLKRTEVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L E+ P+ QGAI IE ++ A +++ I+H T + ERAFLA LDGSC+
Sbjct: 181 TRALEPEEMLPAVAQGAIGIERRRDDSGAAMMLEAIHHGPTGQRLAAERAFLAALDGSCE 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A +G TL G +L DG R+ D +GR A + + + F
Sbjct: 241 TPIAGLAELQGGTLRLRGEILRPDGSERLCDDRSAPVEDGAELGRAMAVDLLAQAGPDFF 300
Query: 306 NF 307
++
Sbjct: 301 DW 302
>gi|15605804|ref|NP_213181.1| porphobilinogen deaminase [Aquifex aeolicus VF5]
gi|2982966|gb|AAC06580.1| porphobilinogen deaminase [Aquifex aeolicus VF5]
Length = 323
Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 171/301 (56%), Gaps = 5/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A + L + ++ ++T GD+IT+ L +IGGKGLF
Sbjct: 21 KIRIGTRKSKLALWQANYVKDFLEKHW---GVEVELVKITTTGDKITDVPLAKIGGKGLF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L
Sbjct: 78 VKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSG 137
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E
Sbjct: 138 SVIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESE 197
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E+ +EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C
Sbjct: 198 ITEV--LEDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + FA + TL + + + + E R GN +A +G A+ + + +
Sbjct: 256 QVPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAEELLKKGGEEI 315
Query: 305 F 305
Sbjct: 316 L 316
>gi|262370151|ref|ZP_06063478.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046]
gi|262315190|gb|EEY96230.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046]
Length = 306
Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 168/303 (55%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR SPLAL A R+ L +H + ++ T+GD+I + L +IGGKG
Sbjct: 1 MKTLKIATRQSPLALWQAEHIRARLEALHA--GLTVELVTFVTQGDKILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S++ S L
Sbjct: 59 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNSYVSFDALP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL
Sbjct: 119 QGAKVGTSSLRRKCQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + E P+ GQGA+ +E N+ +L+ + H DT V ERAF A L+G
Sbjct: 179 ERICHTIRPELSLPAVGQGALGLECRANDQAVLDLIHPLLHIDTDTCVRAERAFNAYLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A + + G V + DG+ + G+ +A ++G AQ +
Sbjct: 239 GCQVPIAGYATLADNRIQLEGRVGSVDGQTLLKAQVAGDAAEAEHLGVVLAQELLAQGAG 298
Query: 303 NVF 305
++
Sbjct: 299 DLL 301
>gi|110635531|ref|YP_675739.1| porphobilinogen deaminase [Mesorhizobium sp. BNC1]
gi|110286515|gb|ABG64574.1| hydroxymethylbilane synthase [Chelativorans sp. BNC1]
Length = 309
Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 153/306 (50%), Positives = 203/306 (66%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ +IGTR S LALA A ETR+ LM H +P I+ + T GDRI +R L+E GG
Sbjct: 1 MQTDVIKIGTRGSALALAQAAETRARLMVAHGLPEDAFEIVVIRTSGDRIQDRPLSEAGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+ G ID AVHS+KDMPT L GL++SA+L RED+RDVFI A+ L+D
Sbjct: 61 KGLFTKEIEEALLEGRIDLAVHSSKDMPTFLPDGLELSAFLEREDVRDVFIGRAAKRLED 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+AL LR R D+ V FRG ++TRL KL + A LLA AG+KRLK
Sbjct: 121 LPHGANLGTSSLRRQALALRLRPDLKVGVFRGNVQTRLRKLEDGAADGTLLALAGLKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V E+++ FPP+ GQGAICIE+ + + +LV+ I+H T +++CERAFLA L
Sbjct: 181 LEHVATELMDPVIFPPALGQGAICIESRTGDTRIAKLVEAIHHPATGFALSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ +AG A G + F G++L DG+ HE+ +G DA IGRDA + IR +
Sbjct: 241 DGSCRTPMAGLATVDGDRIAFSGMILTPDGREVHEIGGDGAAQDAAEIGRDAGRRIRQKA 300
Query: 301 NKNVFN 306
F
Sbjct: 301 GAGFFE 306
>gi|238897905|ref|YP_002923584.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259647800|sp|C4K4E3|HEM3_HAMD5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229465662|gb|ACQ67436.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 309
Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+ TR SPLAL A ++ L H P ++++P+ T+GD I L++ GG
Sbjct: 1 MSNNMIRLATRQSPLALWQAHYVKTGLEFFH--PDLKVILLPMVTQGDNILGTALSKTGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ ++ D AVHS KDMP +GL + A RED RD F+S +
Sbjct: 59 KGLFVKELERAVLDNRADIAVHSIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L + I V D RG + RL KL+ AI+LA AG+KRL
Sbjct: 119 LPEGSVVGTSSLRRQCQLYKNYPGIVVRDLRGNVGARLKKLDQGDYDAIVLAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + +IL E P+ GQGAI IE +++ + V +NH + ++CERA L L
Sbjct: 179 LENRMTQILRPETSLPAAGQGAIGIECRLDDTVTLQRVATLNHRPSQLKISCERALLKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ I +A + L+ V A DG++ + R GN A IG + A +
Sbjct: 239 EGGCQTPIGSYAEIENDELWLRAFVGAPDGQLIIDGERRGNFDSAEKIGFELANELLSRG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|163737211|ref|ZP_02144629.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107]
gi|161389815|gb|EDQ14166.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107]
Length = 320
Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats.
Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L
Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A +G TL G VL DG + D +GR+ A + +
Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGSEAISDEQTCPVEDGAELGREMAAKLLAQA 311
Query: 301 NKNVFNF 307
F++
Sbjct: 312 GAGFFDW 318
>gi|84500376|ref|ZP_00998625.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597]
gi|84391329|gb|EAQ03661.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597]
Length = 315
Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats.
Identities = 127/304 (41%), Positives = 177/304 (58%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P +IGTR SPLALA A E R L +PP + + T GDR+ +R L EIGGKGL
Sbjct: 10 RPLKIGTRGSPLALAQAHEARDRLAHAFDLPPEAFEVCVIQTTGDRVQDRPLKEIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L++G ID AVHS KDMP +GL + YLPRED RD F+S+ + L +
Sbjct: 70 FTREIEHALLTGGIDIAVHSMKDMPVLQPEGLLLDCYLPREDPRDAFVSNLYERLDQIPA 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRR+A +L R D+ V++FRG ++TRL KL + A A LA AG+ RL +
Sbjct: 130 GARVGTSSLRRRAQVLVRRPDLEVVEFRGNVQTRLRKLADGVASATFLAMAGLNRLDRAS 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + L ++ P+ QGAI IE ++ L++ I+ +T + ERAFLA LDGS
Sbjct: 190 IARSALATDEMLPAVAQGAIGIERREDDHATAALLEAIHDPETARQLAAERAFLAALDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A +G TL G +L DG + R+ D +GR+ + +
Sbjct: 250 CETPIAGLADLEGGTLRLRGEILRPDGSEALKDDRSAPVEDGAKLGREMGAALLAQAGDG 309
Query: 304 VFNF 307
F+F
Sbjct: 310 FFDF 313
>gi|121535332|ref|ZP_01667145.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1]
gi|121306118|gb|EAX47047.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1]
Length = 317
Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats.
Identities = 117/304 (38%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K IGTR S LAL A L H P + I + T GD+I + L +IGGK
Sbjct: 1 MKNKLVIGTRGSKLALWQANYIAHRLCQYH--PGLEVTIKHIVTTGDKILDVPLAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+EIE ++ GEID AVHS KDMPT+L GL ++A RE+ D IS +L L
Sbjct: 59 GVFTKEIELAMLRGEIDLAVHSLKDMPTELPPGLTLAAITEREEPFDALISPKYGTLDKL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR+A LL R D++V D RG ++TRL KL + AI+LA AG+KRL
Sbjct: 119 PHGAKVGTSSLRRRAQLLNCRPDLTVCDLRGNVDTRLRKLETEELDAIVLAQAGLKRLGW 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + L + P+ GQGA+ +ET ++ + LV ++ EDT +V ER+FL EL+
Sbjct: 179 DDRITQQLPPDICLPAVGQGALALETRSDDSEVLALVAFLHDEDTAAAVTAERSFLNELE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + + L +L+ DG + G A ++GR AQ++
Sbjct: 239 GGCQVPIGVYGRVENGELVLDAAILSLDGAAALKDRICGAPAAAEDLGRKLAQHMYVTGG 298
Query: 302 KNVF 305
+ +
Sbjct: 299 REIL 302
>gi|56476047|ref|YP_157636.1| porphobilinogen deaminase [Aromatoleum aromaticum EbN1]
gi|56312090|emb|CAI06735.1| Porphobilinogen deaminase [Aromatoleum aromaticum EbN1]
Length = 314
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 153/300 (51%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF
Sbjct: 13 LVIATRESRLALWQAEHVKARLEALY--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFV 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ D AVHS KD+P +L + + RE D F+S SL D+ +
Sbjct: 71 KELEAALLEERADIAVHSMKDVPMQLAEPFALPCISAREVPLDAFVSPRYASLADMPPGT 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG++RL I
Sbjct: 131 VVGTSSLRRESQLHAQFPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLRRLGLADRI 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE + +N DT V ERA L GSC+
Sbjct: 191 RAELPSEVSLPAAGQGALGIECLAKRTDIAAWLAPLNDADTSACVRAERAVARALAGSCE 250
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + L+ G V DG R G+ DA +G A +R +++
Sbjct: 251 VPLGAYAEIRAGRLWLRGFVALPDGSRMVRAEREGDAADAEGLGLALADDLRAQGAEDIL 310
>gi|50083560|ref|YP_045070.1| porphobilinogen deaminase [Acinetobacter sp. ADP1]
gi|55976395|sp|Q6FFA9|HEM3_ACIAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49529536|emb|CAG67248.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
sp. ADP1]
Length = 311
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 115/303 (37%), Positives = 166/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +I TR SPLAL A R L ++ P + ++ T+GD+I + L +IGGKG
Sbjct: 6 MQTLKIATRQSPLALWQAEHIRDRLQALY--PELKVELVKFVTQGDKILDTPLAKIGGKG 63
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ S L
Sbjct: 64 LFVKELEAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNHVMSFDQLP 123
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L + +GTSSLRRK +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL
Sbjct: 124 LGARVGTSSLRRKCQILKQRPDLEIIDLRGNVGTRLAKLDDGQYDAIVLASAGLKRLGLI 183
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ +N E P+ GQGA+ +E N+ K +L+ + H+ T V ERAF A L+G
Sbjct: 184 SRIRHSINAEISLPAVGQGALGLECRANDKKILDLIAPLAHQPTSACVRAERAFNAYLEG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAGFA L G V + DGK + G+ A +G A+ +
Sbjct: 244 GCQVPIAGFATLTQECLTLEGRVGSVDGKTLLKDHVEGHADQAEVLGVQLAKQLLAQGAG 303
Query: 303 NVF 305
+
Sbjct: 304 ELL 306
>gi|170719443|ref|YP_001747131.1| porphobilinogen deaminase [Pseudomonas putida W619]
gi|229836111|sp|B1J1V2|HEM3_PSEPW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169757446|gb|ACA70762.1| porphobilinogen deaminase [Pseudomonas putida W619]
Length = 313
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFSSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEERITASISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHTDTADRVVAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGEQLWLRGLVGQPSGGTLLMADARAPRASAETLGVQVAEDLLGQG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AAAIL 303
>gi|332284596|ref|YP_004416507.1| porphobilinogen deaminase [Pusillimonas sp. T7-7]
gi|330428549|gb|AEC19883.1| porphobilinogen deaminase [Pusillimonas sp. T7-7]
Length = 315
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL A R L ++ P + ++ ++T+GD+I +R+L+++GGKGLF
Sbjct: 7 KLVIATRASRLALWQAEHVRDRLQTLY--PQCQVSLLTMTTRGDQILDRSLSKVGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+ G D AVHS KD+P + +S L R+D RD F+S+ SL DL
Sbjct: 65 VKELETALLDGRADLAVHSLKDVPVDMQSPFALSVILERDDPRDAFVSNDYSSLDDLPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A + + + V RG ++TRL KL+ AI+LA AG++RL E
Sbjct: 125 SVVGTSSLRREAQIRQRYPQLQVQPLRGNLDTRLGKLDRGDYAAIILASAGLRRLGLEAR 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ LN E P+ GQGA+ IE + Q + ++ DT ERA L GSC
Sbjct: 185 IRSHLNPEQSLPAAGQGALGIEILESRSDMQTWLAPLSDPDTTACALAERAVSRVLGGSC 244
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A FA G+TL G+V DG +G+ A +G A + + +
Sbjct: 245 QVPLAAFAQRDGNTLMVRGLVAEPDGSRIIRAQVSGDVSQAEELGVRIANELLEEGARII 304
Query: 305 FN 306
+
Sbjct: 305 LD 306
>gi|87118400|ref|ZP_01074299.1| porphobilinogen deaminase [Marinomonas sp. MED121]
gi|86166034|gb|EAQ67300.1| porphobilinogen deaminase [Marinomonas sp. MED121]
Length = 308
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K I TR S LAL A + SL ++ P + ++ ++TKGD+I N L++IGGK
Sbjct: 1 MKDKIIIATRESQLALWQANNVKDSLAALY--PDIQVELLGMTTKGDQILNSPLSKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+ G D AVHS KD+P +GL ++ RED D F+S+ +L L
Sbjct: 59 GLFVKELEHALLDGRADIAVHSMKDVPMAFPEGLGLAVICEREDPTDAFVSNKYDNLASL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR + L R D+ + D RG + TRL KL+N + AI+LA AG+ RL+
Sbjct: 119 PQGAVVGTSSLRRSSQLALARPDLVIKDLRGNVNTRLRKLDNQEYDAIILATAGLMRLEM 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
IKE ++ +D P+ GQGA+ IE ++ +L+ + H++T+ V ERA L+
Sbjct: 179 TDRIKERISDQDSLPAGGQGAMGIECRSDDADMIKLLAPLQHQETYYRVTAERAVNERLN 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C++ IA F+ +G LY G+V + DG G++ DA +G A+ +
Sbjct: 239 GGCQAPIAAFSLLEGDELYLRGLVGSVDGSTILRDEIRGSKNDAHALGVQLAEKLIAAGA 298
Query: 302 KNVF 305
+
Sbjct: 299 DTLL 302
>gi|17229370|ref|NP_485918.1| porphobilinogen deaminase [Nostoc sp. PCC 7120]
gi|17130968|dbj|BAB73577.1| porphobilinogen deaminase [Nostoc sp. PCC 7120]
Length = 336
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 167/307 (54%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG
Sbjct: 22 RRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDKG 79
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 80 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQID 139
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++RL
Sbjct: 140 TLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRL 199
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL
Sbjct: 200 GMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLRS 259
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R
Sbjct: 260 LEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLREQ 319
Query: 300 SNKNVFN 306
+ + N
Sbjct: 320 GAQEILN 326
>gi|77464252|ref|YP_353756.1| porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1]
gi|77388670|gb|ABA79855.1| Porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1]
Length = 314
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL
Sbjct: 71 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V
Sbjct: 131 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC
Sbjct: 191 PRVPIESEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G L+ G +L DG G DA +G + A + + +
Sbjct: 251 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 310
Query: 305 FNF 307
F++
Sbjct: 311 FSW 313
>gi|77920653|ref|YP_358468.1| porphobilinogen deaminase [Pelobacter carbinolicus DSM 2380]
gi|123756552|sp|Q3A009|HEM3_PELCD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77546736|gb|ABA90298.1| hydroxymethylbilane synthase [Pelobacter carbinolicus DSM 2380]
Length = 315
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL A + L +H P ++V++P++TKGD+I + L ++GG
Sbjct: 1 MSSSALRIGTRASRLALWQAEWVQQQLETLH--PGLSVVLVPITTKGDKILDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L G ID AVHS KD+P+ L GL + PRED RD ++ +S
Sbjct: 59 KGLFVKEIEEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTS+LRR+A LL R D+ ++ RG +ETRL K+ I+LA AG+KRL+
Sbjct: 119 LPQGARIGTSALRRQAQLLHRRPDLDIVSLRGNVETRLRKMEEEDMDGIVLAAAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L+++ P+ GQGA+ +E + + EL+ ++ DT +V ERAFL L
Sbjct: 179 LAERIAEYLSVDVSLPAIGQGALGLECREGDDRTLELIAPLHDADTAVAVRAERAFLRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ +A A TL G+V DG + + A +G A+ +
Sbjct: 239 NGGCQVPLAAHATVAEQTLTMVGLVAEVDGGSLIKETLAAPVAQAEAVGCQLAETLLARG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADRIL 303
>gi|206889552|ref|YP_002248559.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741490|gb|ACI20547.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 311
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 176/306 (57%), Gaps = 3/306 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ IG+R S LA+ A + L ++ P + I + T GD+I + L +IGGK
Sbjct: 4 KRNKIVIGSRGSKLAMWQANWVKDKLQTLY--PELKVEIEKIKTTGDKILDAPLAKIGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+S +D AVHS KD+PT++ +GLQISA RED RD FIS L +L
Sbjct: 62 GLFVKEIEEALLSKRVDLAVHSMKDVPTEIPEGLQISAICEREDPRDAFISKDGVLLNEL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR L R+D+ + RG ++TR+ KL + + AI+LA AG+KR+
Sbjct: 122 PQEAVLGTSSLRRTVQLKALRNDLVIKPLRGNVDTRIRKLKDGEFQAIVLAMAGVKRMGV 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E ++ + + + P+ GQGAI IET V++ EL+K +NHE+T + ERAFL+ +
Sbjct: 182 ENLVTQAFSEDLMIPAIGQGAIGIETRVDDDFVNELIKPLNHEETAICILAERAFLSVMG 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ +A A ++L G++ +GK + R G+ A ++G + A +
Sbjct: 242 GGCQVPLACHARIVNNSLKIVGMIGDPEGKMPVIKGFREGSLSQAQSLGVELANELLHRG 301
Query: 301 NKNVFN 306
K +
Sbjct: 302 GKEILE 307
>gi|119475318|ref|ZP_01615671.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143]
gi|119451521|gb|EAW32754.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143]
Length = 313
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 110/308 (35%), Positives = 170/308 (55%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A ++ L H P ++ ++ ++T+GD++ + L +IGG
Sbjct: 1 MPSNLVRIATRESPLALWQAEFIKAGLQAAH--PGLDVELLGMTTRGDKMLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL++S RED RD F+S+ +++ +
Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPEGLELSIICEREDPRDAFVSNHFKTVNE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L S +GTSSLRR+ L R D+++ID RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPLGSRVGTSSLRRQCQLRALRPDLNIIDLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I + + ++ P+ GQGA+ +E ++ + Q L+ +NH T V+ ERA L
Sbjct: 179 MEQRIADPIAVDSSLPAGGQGAVGVEARSDDHRIQALLAPLNHRSTALRVSAERAMNLRL 238
Query: 241 DGSCKSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
G C+ IA FA L G+V + DGK R A +G + A +
Sbjct: 239 QGGCQVPIACFAELDIEGSGQLRLRGLVGSPDGKEILRCERQAKPEMAEALGIEVADNLL 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 AQGAERIL 306
>gi|163740378|ref|ZP_02147772.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10]
gi|161386236|gb|EDQ10611.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10]
Length = 320
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L
Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A +G TL G VL DG + D +GR+ A + +
Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGSEAISDEQTCPVEDGAELGREMATKLLAQA 311
Query: 301 NKNVFNF 307
F++
Sbjct: 312 GAGFFDW 318
>gi|190893753|ref|YP_001980295.1| porphobilinogen deaminase [Rhizobium etli CIAT 652]
gi|190699032|gb|ACE93117.1| porphobilinogen deaminase protein [Rhizobium etli CIAT 652]
Length = 309
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 166/306 (54%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D
Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICIESRIGDSRIDDLLAAVNDAATFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|113478006|ref|YP_724067.1| porphobilinogen deaminase [Trichodesmium erythraeum IMS101]
gi|110169054|gb|ABG53594.1| hydroxymethylbilane synthase [Trichodesmium erythraeum IMS101]
Length = 320
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 155/305 (50%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LAL + + L P + +ST+GD+I + L +IG KGLF
Sbjct: 9 TIRIGSRKSQLALIQTYWVQEKLEK--NFPNITFEVHKMSTQGDKILDVALAKIGDKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDL 121
T+E+E ++ E D AVHS KD+PT L +GL + RE+ D + H + L+ L
Sbjct: 67 TKELELGMLQNETDLAVHSLKDLPTNLPEGLILGCVTERENPADALVLHEKLKDKQLETL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A L + D RG + TRL KL+ + A++LA+AG+ RL
Sbjct: 127 PEGAVIGTSSLRRLAQLRYHFPHLEFKDVRGNLNTRLAKLDAGEYDALILAFAGLHRLGM 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I +I+ E + GQGA+ IE + L+K + H T ERAFL EL+
Sbjct: 187 SDRIHQIIPPEISLHAVGQGALGIECRAGDNNILNLLKSLEHTATAQRCYAERAFLRELE 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I +G L G+V + DGK + G DA IG + AQ +R
Sbjct: 247 GGCQVPIGVNTQIEGEQLTLTGLVASLDGKKLVKDIVTGATADAEQIGIELAQKLRKQGA 306
Query: 302 KNVFN 306
+ + +
Sbjct: 307 QEILD 311
>gi|300866645|ref|ZP_07111332.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506]
gi|300335354|emb|CBN56492.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506]
Length = 323
Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KG
Sbjct: 9 TRTVRIGSRKSQLALVQTYWVQEQLQQ--RFPQCTFEVHTMSTQGDKILDVPLAKIGDKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E ++S E D AVHS KD+PT L +GL + RE+ D + +H + L+
Sbjct: 67 LFTKELEVGMLSNETDFAVHSLKDLPTNLPEGLILGCVSERENPADALVVHANHQDKQLE 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 127 TLPPGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLAKLDEGEYDAIILAVAGLQRL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +I++ E + GQGA+ IE + EL+K + H +T ERAFL E
Sbjct: 187 GMGDRVHQIISPEISLHAVGQGALGIECRAGDDDILELIKALEHTETAQRCYAERAFLRE 246
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G L G+V + DG+ + + G A +G D A +R
Sbjct: 247 LEGGCQVPIGVNTKIEGDQLTLTGLVASLDGQRLIKDTVTGAAATAELLGIDLAHRLRQQ 306
Query: 300 SNKNVFN 306
+ +
Sbjct: 307 GAQEILE 313
>gi|296132653|ref|YP_003639900.1| porphobilinogen deaminase [Thermincola sp. JR]
gi|296031231|gb|ADG81999.1| porphobilinogen deaminase [Thermincola potens JR]
Length = 310
Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +GTR S LA+ +L ++ P + I+ + T+GD+I + L +IG KGL
Sbjct: 3 REIVVGTRDSALAMWQTNWVVDNLRKLN--PDYTFKIVSMKTQGDKILDVALAKIGDKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++ EID AVHS KD+PT L +GL+I A R D RDV ++ LKD+
Sbjct: 61 FTKELEFAMLRNEIDLAVHSMKDLPTVLPEGLKIGAICERHDPRDVLVARDGILLKDMPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRR A LL++R D+ +I RG + TR+ KL I+LA AGI+RL
Sbjct: 121 GARIGTSSLRRTAQLLKYRPDLQIISLRGNLNTRMAKLERENLDGIILAAAGIERLGWAY 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + E P+ GQG+I IE + + +V +NH + ++ ERA L +L+G
Sbjct: 181 RITQRIPFEVCLPAVGQGSIGIEIREGDEEVSRIVDKLNHGPSAAAITAERAMLKKLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I +G L G+V + DGK G +A ++G A+ + +
Sbjct: 241 CQIPIGALGRVEGDRLTLEGVVASLDGKELLRSRVEGPASEAASLGVALAEKLLDMGALE 300
Query: 304 VF 305
+
Sbjct: 301 IL 302
>gi|146276603|ref|YP_001166762.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025]
gi|145554844|gb|ABP69457.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025]
Length = 322
Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 130/303 (42%), Positives = 183/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF
Sbjct: 19 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+ G ID AVHS KDMPT +GL + YLPRED RD FI++ L DL
Sbjct: 79 TREIEEALLDGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITYAEGGLADLPQG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK + V
Sbjct: 139 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDDV 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + E+ + QGAI IE +++P+ QE++ I+ T + ER+FL +LDGSC
Sbjct: 199 PRVAIEPEEMLSAVAQGAIGIERRIDDPRTQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A +G ++ G +L DG G DA +G + A + + +
Sbjct: 259 ETPIAGLAVLEGDQIWLRGEILRPDGSESISGEIRGGIPDAAALGAELASELLGRAPSDF 318
Query: 305 FNF 307
F++
Sbjct: 319 FSW 321
>gi|24211755|sp|Q8YVU6|HEM3_ANASP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 323
Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 167/307 (54%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG
Sbjct: 9 RRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 67 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQID 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++RL
Sbjct: 127 TLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL
Sbjct: 187 GMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLRS 246
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R
Sbjct: 247 LEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLREQ 306
Query: 300 SNKNVFN 306
+ + N
Sbjct: 307 GAQEILN 313
>gi|220904556|ref|YP_002479868.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868855|gb|ACL49190.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ I TR S LAL A +S L + P I + + TKGD I + L ++GGK
Sbjct: 1 MRNTLTIATRGSRLALWQAEHVKSCLQAIR--PGLEIRLNVIKTKGDIILDVPLAKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L++GE D AVHS KD+P +L +GL + PRED D +SH S+ L
Sbjct: 59 GLFVKEIEEALLNGEADLAVHSMKDVPMELPEGLILGCVPPREDPTDCLLSHKYDSVAAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ +GTSSLRR++ LL R D+ + RG ++TRL KL AI+LA AG+KRL
Sbjct: 119 PPNACVGTSSLRRQSQLLAQRPDLRIESLRGNVDTRLRKLQEGMYDAIILASAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
L+ F P+ GQGA+ IE N+ + L+ + T V ER FLA L+
Sbjct: 179 SAPHMHALDPHTFLPAVGQGALGIECRENDYELFTLLAEMEDSATRVCVEAERGFLAGLE 238
Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG A TL G+V DG S++G+ A G + A I
Sbjct: 239 GGCQVPIAGHARLLDDDTLRLEGLVAEVDGSRILRCSKDGHTSQARRWGLELAGEILEQG 298
Query: 301 NKNVFN 306
K +
Sbjct: 299 GKGILE 304
>gi|224370660|ref|YP_002604824.1| HemC [Desulfobacterium autotrophicum HRM2]
gi|223693377|gb|ACN16660.1| HemC [Desulfobacterium autotrophicum HRM2]
Length = 325
Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK +IGTR S LAL A + + D + P + I+ + T GD I +R L+ +GGK
Sbjct: 19 MKKTIKIGTRGSKLALWQANHVKDRIED--QFPETEVEIMTIKTTGDMIVDRPLSMVGGK 76
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIEK L+ ID AVHS KDMP +L GL I A RE+ DV IS+ SL DL
Sbjct: 77 GLFVKEIEKALLESTIDMAVHSMKDMPGELPPGLVIGAVPARENPFDVLISNNNLSLADL 136
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR + + R DI RG ++TRL KL + A LLA AG+ RL
Sbjct: 137 PKGARIGTSSLRRASQIKHARPDIETASIRGNLDTRLKKLAAGEFDATLLAAAGLIRLGM 196
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ VI + + P+ GQGA+CIE+ + ++ +NH +T V+ ERAFL LD
Sbjct: 197 KTVITQYFDETIMIPAVGQGALCIESRQEDLDIAPVLAFLNHGETHTVVSGERAFLRRLD 256
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC +A F + + G+V + DG+ + + G D G A+ +
Sbjct: 257 GSCHIPVACFGRLEDHRVILTGLVASEDGRTILKETVAGTPEDPQKAGIALAETLLSKGA 316
Query: 302 KNVFN 306
+
Sbjct: 317 DKILE 321
>gi|163757401|ref|ZP_02164490.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43]
gi|162284903|gb|EDQ35185.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43]
Length = 312
Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 159/305 (52%), Positives = 209/305 (68%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ KP+RIGTR SPLALA A ETR LM H +P I+ LSTKGDRIT+R L EIGGK
Sbjct: 5 QMKPYRIGTRGSPLALAQAHETRERLMAAHDLPESAFEIVVLSTKGDRITDRPLAEIGGK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEE+E++L G +D AVHS+KDMPT L +GL I YL RED RD +IS A L+DL
Sbjct: 65 GLFTEELEEQLSDGRLDLAVHSSKDMPTALPEGLGIVTYLEREDPRDAYISSAAPRLEDL 124
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+G+SSLRR+AL+ R R DISVI FRG ++TRL KL + + HA +LA+AG+KRL K
Sbjct: 125 PQKAVVGSSSLRRQALIRRLRPDISVITFRGLVDTRLRKLADGEVHATMLAFAGLKRLGK 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+V+ +++ E FPP+PGQGAICIE +++ + EL+ I+H DT ++NCER FL LD
Sbjct: 185 SEVVTNLMDPESFPPAPGQGAICIEARLDDERIAELLAPIDHADTHAALNCERGFLGALD 244
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC++ IAG A + + FYG++L DG FH++ G DA +G DA +R +
Sbjct: 245 GSCRTPIAGHATLENGQVSFYGMILTPDGTTFHDIRVQGPAADAAQLGADAGAEVRARAG 304
Query: 302 KNVFN 306
F
Sbjct: 305 SKFFE 309
>gi|289207199|ref|YP_003459265.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix]
gi|288942830|gb|ADC70529.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix]
Length = 315
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 115/293 (39%), Positives = 161/293 (54%), Gaps = 2/293 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP RI TR SPLA+ A + L +H P + ++ ++T+GDR+ + L IGGKG
Sbjct: 1 MKPLRIATRKSPLAMWQAEHVAARLRGLH--PDLPVELVGMTTQGDRVLDSPLARIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++ D AVHS KD+P +L L + L RED D F+S+T + +L
Sbjct: 59 LFVKELEVAMLEDRADIAVHSVKDVPMELPADLVLPVILDREDPLDAFVSNTYAHVDELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR+ L R D+ + D RG + TRL KL+ + AILLA AG+KRL +
Sbjct: 119 QGARVGSSSLRRQCQLRARRPDLKITDLRGNVNTRLGKLDAGEYDAILLAAAGLKRLGFD 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L P+ GQGAI IE N+P+ L+ +N DT D V ERAF L+G
Sbjct: 179 ERIRARLEPAVSLPAVGQGAIAIECRENDPEIAALIAPLNDRDTSDRVRAERAFNRRLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
C+ +AG A G L G+V A DG G R DA +G A+
Sbjct: 239 GCQVPLAGHATLDGDRLRLDGLVGAVDGSQLLRRQVEGPRGDAEALGVQLAEQ 291
>gi|78044433|ref|YP_360051.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123756773|sp|Q3ACT3|HEM3_CARHZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77996548|gb|ABB15447.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 311
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK +G+R S LAL L +H P N I+ + TKGD+I + L +IG K
Sbjct: 1 MKKEVIVGSRDSALALWQTNWVVERLSKIH--PEINFKIVTMKTKGDKILDVALAKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E L++ ID AVHS KD+PT L +GL+I A+ RE DVFIS +L
Sbjct: 59 GLFTKELEHALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCEREYPGDVFISPKGFKFLEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR A +L R D+ I RG + TR K+ I+LAYAG+KRL
Sbjct: 119 PQGARIGTSSLRRIAQILAVRPDLQAIPLRGNLPTRFRKMEEMDLDGIILAYAGVKRLGY 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I E+L+ + P+ GQG+I +E ++ +EL+K I+H T ++ ERAFL L+
Sbjct: 179 EDKITEMLSFDLCLPAVGQGSIGVEIRADDTFIEELLKPIDHFATNRAIRAERAFLKRLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I ++ K + L+ G+V + DGK+ + + G+ + +G A+ +
Sbjct: 239 GGCQIPIGAYSEVKENRLHLKGVVASLDGKLVIKGEKEGSIEEPEKVGISLAEELLTKGA 298
Query: 302 KNVFN 306
+ +
Sbjct: 299 QKILE 303
>gi|46201306|ref|ZP_00208053.1| COG0181: Porphobilinogen deaminase [Magnetospirillum
magnetotacticum MS-1]
Length = 315
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 134/310 (43%), Positives = 183/310 (59%), Gaps = 4/310 (1%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLT 56
M K RIGTR SPLALA ETR L I I + T GD I +R L
Sbjct: 1 MTAKLPILRIGTRGSPLALAQTHETRDRLAAAWAPLGQEGAIDIEVIKTTGDLIQDRPLA 60
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
EIGGKGLFT+E+++ ++SG I AVHS KD+PT L G+ + LPRED+RD FIS A
Sbjct: 61 EIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTLLPDGIVLPCILPREDVRDAFISLKAA 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
SL DL +V+GTSSLRR A +L R D+ V++FRG ++TRL KL+ A +LA AG+
Sbjct: 121 SLADLPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLDEGVVDATMLAMAGL 180
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+RL + L+ +D P+ QGAI I ++ A + +N D++ V ERAF
Sbjct: 181 RRLGLAGHVTSALSEDDMLPAVAQGAIGITCRADDEAAHAFLAALNCPDSFVRVAAERAF 240
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L LDGSC++ IA A G L F G++++ DG H SR+G+R DA +G+DAA+ +
Sbjct: 241 LTRLDGSCRTPIAALAVLDGDHLSFRGLIVSPDGTAIHATSRSGSRSDAEAMGKDAAEEL 300
Query: 297 RFISNKNVFN 306
++ F+
Sbjct: 301 IKVAGPGFFD 310
>gi|74318586|ref|YP_316326.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259]
gi|123772872|sp|Q3SFT5|HEM3_THIDA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|74058081|gb|AAZ98521.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259]
Length = 306
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 112/302 (37%), Positives = 160/302 (52%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R L ++H P + I+ ++T+GD+I + TL++IGGKGLF
Sbjct: 3 TLTIASRESALAMWQAEHIRDRLRELH--PECKVNILGMTTRGDQILDVTLSKIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L +GE D AVHS KD+P +L G +++ RED RD F+S+ L DL
Sbjct: 61 VKELEVALAAGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A L ++V RG + TRL KL+ + AILLA AG+KRL
Sbjct: 121 SVVGTSSLRREAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
IK +L++E+ P+ GQGA+ IE N ++ +N T V ER L GSC
Sbjct: 181 IKSLLSVEESIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A K L G V DG F G+ D +G+ A + + V
Sbjct: 241 QVPLGAHASYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAV 300
Query: 305 FN 306
+
Sbjct: 301 LD 302
>gi|85060344|ref|YP_456046.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans']
gi|84780864|dbj|BAE75641.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans']
Length = 320
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RI TR SPLAL A R L+ H P + ++PL T+GD + L ++GG
Sbjct: 8 MQDNLLRITTRQSPLALWQAGYVRDELLRHH--PHLQVELVPLVTRGDITLDTPLAKVGG 65
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+ GL + R+D RD F+S +L
Sbjct: 66 KGLFIKELELALLEHRADIAVHSMKDVTVSFPAGLGLCVLCERDDPRDAFVSPRYANLDV 125
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L R D+ V D RG + TRL KL+ A++LA AG+KRL
Sbjct: 126 LPPGAIVGTSSLRRQCQLRERRPDVIVHDLRGNVGTRLAKLDRGNFDAVILAVAGLKRLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I+ ++ D P+ GQGA+ IE +++ + L+ ++H +T V ERA A L
Sbjct: 186 LEDRIRHAIDPADSLPAVGQGAVGIECRLDDARTLALLAPLHHRETSLRVGAERAMNARL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A G ++ +V + DG A +G A +
Sbjct: 246 QGGCQVPIGSYAVLDGEEIWLRALVGSPDGTTVIRSEGRAPLAQAEQLGLRLADDLLNRG 305
Query: 301 NKNVF 305
+ +
Sbjct: 306 ARAIL 310
>gi|77461708|ref|YP_351215.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1]
gi|123602840|sp|Q3K4T0|HEM3_PSEPF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77385711|gb|ABA77224.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1]
Length = 313
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEAAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTADRVTAERALNKHL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGEPSGGKLLNAQARAPRAAAETLGVQVAEDLLSQG 298
Query: 301 NKNVF 305
++
Sbjct: 299 ADDIL 303
>gi|217969858|ref|YP_002355092.1| porphobilinogen deaminase [Thauera sp. MZ1T]
gi|217507185|gb|ACK54196.1| porphobilinogen deaminase [Thauera sp. MZ1T]
Length = 310
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 100/308 (32%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEK---KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M + + I TR S LAL A ++ L +H P + ++ ++T+GD+I +R L +
Sbjct: 1 MSQSSPERIVIATRESRLALWQAEHIKARLEALH--PGCRVELLGMTTRGDQILDRPLAK 58
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
+GGKGLF +E+E L+ G D AVHS KD+P + + RE D F+S +S
Sbjct: 59 VGGKGLFVKELETALLDGRADIAVHSMKDVPMVMEPEFALPCITAREVPLDAFVSSRYES 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L D+ +V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+
Sbjct: 119 LADMPPGAVVGTSSLRRESQIHAQYPFLGVTSLRGNLDTRLRKLDEGQYDAIILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + I+ ++ E P+ GQGA+ IE ++ + DT V ERA
Sbjct: 179 RLGLGERIRSVMPAEVSLPAAGQGALGIECLSARADVIGWLQPLVDADTTACVLAERAVA 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L GSC+ + +A + L+ G V DG R G +A +GR A +R
Sbjct: 239 RALAGSCEVPLGAYAVMREGRLWLRGFVARPDGSTIVRAEREGAPAEAEALGRALADDLR 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 AQGAEAIL 306
>gi|13473577|ref|NP_105145.1| porphobilinogen deaminase [Mesorhizobium loti MAFF303099]
gi|23821698|sp|Q98EI7|HEM3_RHILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|14024327|dbj|BAB50931.1| hydroxymethylbilane synthase [Mesorhizobium loti MAFF303099]
Length = 308
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 143/306 (46%), Positives = 206/306 (67%), Gaps = 1/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GG
Sbjct: 1 MQT-TLKIGTRGSPLALAQAHETQARLMAAHGLPAEAFEVVVISTSGDRIQDRPLSEAGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ D
Sbjct: 60 KGLFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIAD 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL
Sbjct: 120 LLRGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA L
Sbjct: 180 LEHVATDLMPLDIFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAAL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A + L F G++++ DG H V G DA IG +AA+ +R +
Sbjct: 240 DGSCRTPIAGHATIETGNLSFAGLIISPDGTQSHTVELQGPAQDAARIGDEAARTVRAKA 299
Query: 301 NKNVFN 306
+ F+
Sbjct: 300 GEKFFD 305
>gi|209551271|ref|YP_002283188.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537027|gb|ACI56962.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 309
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 163/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E++L +GE+D AVHSAKDMPTKL GL +SAYLPREDIRD I TA L D
Sbjct: 61 KGLFTEELEQQLTTGELDFAVHSAKDMPTKLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K +V+ +IL+ + FPP+P QGAIC+E+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICLESRIGDTQIDDLLAPVNDAATFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|190575960|ref|YP_001973805.1| porphobilinogen deaminase [Stenotrophomonas maltophilia K279a]
gi|229846305|sp|B2FI06|HEM3_STRMK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|190013882|emb|CAQ47520.1| putative porphobilinogen deaminase [Stenotrophomonas maltophilia
K279a]
Length = 303
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 160/306 (52%), Gaps = 4/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGG
Sbjct: 1 ME--TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDPPFALPAMLTRHDPADGFVSNLYASLDA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPIGARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L + P+P QGA+ +E N + L ++ T V ERA L
Sbjct: 177 LGERIVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAPLDDAATRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A A +G L+ G+V ++ G D +G+ A+ +
Sbjct: 237 HGSCHVPVAAIAQWQGDDLHLQGLVGSASDGRAVRAEAVGPANDPEGLGQRVAKLLLDDG 296
Query: 301 NKNVFN 306
+ N
Sbjct: 297 AGELLN 302
>gi|11467957|sp|O66621|HEM3_AQUAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 304
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 171/301 (56%), Gaps = 5/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A + L + ++ ++T GD+IT+ L +IGGKGLF
Sbjct: 2 KIRIGTRKSKLALWQANYVKDFLEKHW---GVEVELVKITTTGDKITDVPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L
Sbjct: 59 VKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E
Sbjct: 119 SVIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESE 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E+ +EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C
Sbjct: 179 ITEV--LEDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 236
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + FA + TL + + + + E R GN +A +G A+ + + +
Sbjct: 237 QVPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAEELLKKGGEEI 296
Query: 305 F 305
Sbjct: 297 L 297
>gi|254447439|ref|ZP_05060905.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015]
gi|198262782|gb|EDY87061.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015]
Length = 313
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL A + + L + P +I ++ ++TKGD+I + L +IGGKG
Sbjct: 1 MKTLRIATRQSPLALWQAEDVAAKLKAHY--PDLDIELVKMTTKGDKILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
LF +E+E ++ G D AVHS KD+P ++ +GL +S L RED RD F+S+ SL +
Sbjct: 59 LFIKELEVGMLEGRADIAVHSMKDVPVDSEFPEGLHLSVILEREDPRDAFVSNRYNSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+ +L + RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 119 LPEGAVVGTASLRRQCQVLGRYPHLKTAVLRGSVGTRLGKLDDGQFDAIVLASAGLMRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I L E P+ GQGA+ IE ++ + +L+ + DT + ERA A L
Sbjct: 179 LEERITAKLPPEISLPAIGQGAVGIECRKDDTELNKLLAPLADRDTTTRLKAERALNARL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A +G L G+V A DG + R G R A +IG A+ +
Sbjct: 239 QGGCQVPIAGYAELEGDQLSMRGLVGAPDGSKLYTSERRGPRDQAADIGLAVAEDLLSQG 298
Query: 301 NKNVF 305
V
Sbjct: 299 ANAVL 303
>gi|303247619|ref|ZP_07333890.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ]
gi|302491099|gb|EFL50993.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ]
Length = 310
Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ I TR S LAL A + L + H P + ++P+ TKGDRI + L ++GGK
Sbjct: 1 MRDKLVIATRGSKLALWQANHVAARLKEAH--PGLAVDLLPIKTKGDRILDVPLAKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+ G D AVHS KD+P + GL + RED D+ +S L L
Sbjct: 59 GLFVKEIEEALLDGRADLAVHSMKDVPAEQPAGLVVGITPKREDPCDMLLSVAYDGLDAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRRKA L R D++++D RG ++TR+ KL + AI++A AG+ RL
Sbjct: 119 PEGAKVGTSSLRRKAQLTALRPDLAIVDLRGNLDTRVGKLTDGLFDAIVVARAGLNRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E L F P+ QGA+ IE ++ + ++ +H ++ D+V ERAFL L+
Sbjct: 179 SAPKSERLCPPRFLPAAAQGALGIEYRFDDRETAAMLAFFDHPESRDAVAAERAFLGRLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IA A G+ + G+V D G R DA+ +G+ A + +
Sbjct: 239 GGCQVPIAAHAVIDGNLISIDGLVADPDTGRTFRDVATGKRDDAVELGKKLADSVLAMGA 298
Query: 302 KNVFN 306
+ + +
Sbjct: 299 RAILD 303
>gi|255020135|ref|ZP_05292205.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756]
gi|254970428|gb|EET27920.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756]
Length = 319
Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 117/302 (38%), Positives = 170/302 (56%), Gaps = 4/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR SPLAL A R+ L+ H P + I+P++T+GDR+ L EIGGKGLF
Sbjct: 17 PLRIGTRASPLALWQAEHVRAGLLRAH--PEIPVEIVPMTTQGDRMLAVPLHEIGGKGLF 74
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ G +D AVHS KD+P + +GL+I+A L RED+RD ++S+T +DL
Sbjct: 75 VKEIEAALLEGTVDLAVHSMKDVPAQQPEGLEIAAILAREDVRDAWVSNTFARPEDLPQG 134
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+G+SSLRR+A LL V+D RG + TRL KL+ I+LA AG+KRL +
Sbjct: 135 GRVGSSSLRRRAQLLHRLPQTVVLDLRGNVATRLRKLDAGDYDGIVLAAAGLKRLGLLER 194
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L E P+ GQGAI +E ++ + + L+K +N T V ER L G C
Sbjct: 195 IRHYLEPELSLPAVGQGAIGVEIRSDDARTRTLLKPLNDPTTSRCVGAERHMNRLLGGDC 254
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A A G+ L G+V + DG+ G+ A ++G AQ + +++
Sbjct: 255 RLPVAALAEADGTGLRLRGLVASPDGRELLRAEAVGSL--AHSVGEQVAQALLAQGAQHI 312
Query: 305 FN 306
+
Sbjct: 313 ID 314
>gi|218437216|ref|YP_002375545.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424]
gi|218169944|gb|ACK68677.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424]
Length = 320
Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L H P + +ST+GD+I + L +IG KG
Sbjct: 7 TRTVRIGSRKSQLALVQTYWVQEQLQKHH--PDRQFEVETMSTQGDKILDVALAKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E ++ G+ D AVHS KD+PTKL GL + R D D + H + ++
Sbjct: 65 LFTKELEVSMLEGQTDLAVHSLKDLPTKLPDGLMLGCITERVDPADGLVVNEKHKDKQIE 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLTRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +++ + + GQGA+ IE +P+ EL+KV+ H+ T D ER+FL E
Sbjct: 185 GMSDRIHQVIPSDISLHAVGQGALGIECRTEDPEILELLKVLEHQPTRDRCYAERSFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G TL G+V + DGK + + G DA +G+D A +R
Sbjct: 245 LEGGCQVPIGVNTSVDGDTLTLTGMVASLDGKKLIKDTITGKTTDAEQLGKDLAIRVRNA 304
Query: 300 SNKNVF 305
+
Sbjct: 305 GAGEIL 310
>gi|83941602|ref|ZP_00954064.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36]
gi|83847422|gb|EAP85297.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36]
Length = 317
Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats.
Identities = 131/305 (42%), Positives = 177/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG
Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA
Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL +
Sbjct: 129 EGAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG
Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G TL+ G VL DG R+G +G D AQ + +
Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|187478790|ref|YP_786814.1| porphobilinogen deaminase [Bordetella avium 197N]
gi|115423376|emb|CAJ49910.1| porphobilinogen deaminase [Bordetella avium 197N]
Length = 314
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 159/300 (53%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L D++ P + ++ L+T+GD+I +R+L+++GGKGLF
Sbjct: 7 LVIATRASRLALWQAEHVRDRLRDLY--PACAVELLTLTTRGDQILDRSLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + +S L R D RD F+S SL L + +
Sbjct: 65 KELEHALLDGRADLAVHSLKDVPVDIQAPFALSTVLERADPRDAFVSARYASLDALPVGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A + R D+ V RG ++TRL KL+ + A++LA AG++R+ I
Sbjct: 125 VVGTSSLRREAQIRAARPDLVVRPLRGNLDTRLGKLDRGEYDAVVLAAAGLERIGYGDRI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ GQGA+ IE + + + ++ T V+ ERA L GSC+
Sbjct: 185 RARLAPAQSLPAAGQGALGIEIRDDRDDMRAWLAPLSDASTTACVSAERAVSRALGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +A G TL +V + DG+ SR G +A ++G A + +
Sbjct: 245 VPIGAYAELHGQTLRIDALVASPDGRRILRASRLGPVAEADSLGMAVAHDLLAQGGDAIL 304
>gi|317402904|gb|EFV83446.1| HemC protein [Achromobacter xylosoxidans C54]
Length = 314
Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 155/307 (50%), Gaps = 3/307 (0%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++G
Sbjct: 1 MSLPQRLVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G D AVH KDMP + ++ A L R D RD F+S+ +L
Sbjct: 59 GKGLFVKELETALLDGRADLAVHCLKDMPVDMQAPFELCAVLDRADPRDAFVSNRYATLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 119 DLPAGAVVGTSSLRRESQIRARYPQLLVKPLRGNLDTRLGKLDRGEYDAIVLAAAGLNRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +L+ + P+ GQGA+ IE + + + +N ERA
Sbjct: 179 GLTDRISSLLDPAESLPAAGQGALTIEIRDDRDDMRAWLAPLNDAGATSISLAERAVSRR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ +A +A TL +V + DG +G A IG A +
Sbjct: 239 LGGSCQVPLAAYAEIADDTLTLRALVASPDGTRMLRAHGSGPVAQAQAIGEAVAAELFDA 298
Query: 300 SNKNVFN 306
+ + +
Sbjct: 299 GAQAILD 305
>gi|222087476|ref|YP_002546013.1| porphobilinogen deaminase [Agrobacterium radiobacter K84]
gi|221724924|gb|ACM28080.1| porphobilinogen deaminase [Agrobacterium radiobacter K84]
Length = 322
Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats.
Identities = 164/308 (53%), Positives = 216/308 (70%), Gaps = 1/308 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRI +RTL EIGG
Sbjct: 14 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHGLPEEMFEIVALTTKGDRIADRTLAEIGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+KL SGE+D AVHSAKDM TKL +GL ++AYLPREDIRD I TA L +
Sbjct: 74 KGLFTQELEEKLTSGELDFAVHSAKDMATKLPEGLALTAYLPREDIRDSVIGRTAPKLIE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G++SLRR+AL+ R R DI+VI FRG ++TRL KL +A A LLA AG+KRL
Sbjct: 134 LPHGATVGSASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLAVAGLKRLG 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VI +IL+ ++FPP+P QGAI IE+ + + + +L+ IN T+D V+CER FLA L
Sbjct: 194 KVDVITDILDPDEFPPAPAQGAIGIESRIGDKRMNDLLAAINDSPTFDIVSCERGFLAAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A C+G + F+G++L DG+ H + GNR DA +G +A Q IR +
Sbjct: 254 DGSCRTPIAGYAVCEGDHIRFFGMILTPDGQQVHTTTIEGNRRDAEALGTNAGQAIRAEA 313
Query: 301 NKNVF-NF 307
F ++
Sbjct: 314 GSAFFEDW 321
>gi|83855078|ref|ZP_00948608.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1]
gi|83842921|gb|EAP82088.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1]
Length = 317
Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats.
Identities = 131/305 (42%), Positives = 177/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG
Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA
Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL +
Sbjct: 129 ESAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG
Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G TL+ G VL DG R+G +G D AQ + +
Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|311105076|ref|YP_003977929.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8]
gi|310759765|gb|ADP15214.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8]
Length = 315
Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 3/306 (0%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++G
Sbjct: 1 MSLPQRLVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+T +L
Sbjct: 59 GKGLFVKELENALLDGRADLAVHSLKDVPVDLQAPFELCAVLDRADPRDAFVSNTHDTLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +V+GTSSLRR++ + ++ V RG ++TRL KL+ + AI+LA AG++RL
Sbjct: 119 DLPAGAVVGTSSLRRESQIRARYPELVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLERL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I+ +L ED P+ GQGA+ IE + + + + DT V ERA +
Sbjct: 179 GLGARIRSLLEPEDSLPAAGQGALGIEIRDDRDDMRAWLAPLVSADTTSCVVAERAVSRK 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ +A +A G TL +V + DG SR+G DA IG AAQ +
Sbjct: 239 LGGSCQVPLAAYAEIAGGTLSLRALVASPDGVRMVHASRSGPVADAQAIGEAAAQALLDA 298
Query: 300 SNKNVF 305
+++
Sbjct: 299 GAQDIL 304
>gi|319780787|ref|YP_004140263.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166675|gb|ADV10213.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 308
Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats.
Identities = 142/306 (46%), Positives = 208/306 (67%), Gaps = 1/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RIGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GG
Sbjct: 1 MQT-ILRIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ +
Sbjct: 60 KGLFTKEIEEALLAGRIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKVAKAIAE 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL A +LAYAG+KRL
Sbjct: 120 LPRGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLEEGVAAGTILAYAGLKRLG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V+ +++ ++ FPP+PGQGAI IET + + ++++ ++ T ++ CERAFLA L
Sbjct: 180 LEHVVTDLIPLDVFPPAPGQGAIGIETRIGDRDVEKMLAAVHDVPTGQALACERAFLAAL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A + L F G++++ DG H V G+ DA IG +AA+ +R +
Sbjct: 240 DGSCRTPIAGYAAIEAGKLSFAGLIISPDGTQSHTVELQGSAQDAARIGGEAARSVRARA 299
Query: 301 NKNVFN 306
+ F+
Sbjct: 300 GEKFFD 305
>gi|260464233|ref|ZP_05812426.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075]
gi|259030036|gb|EEW31319.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075]
Length = 308
Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats.
Identities = 139/306 (45%), Positives = 207/306 (67%), Gaps = 1/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GG
Sbjct: 1 MQT-TLKIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+L RED RD ++ +++ D
Sbjct: 60 KGLFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLSREDARDAYVGKATKTIAD 119
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL
Sbjct: 120 LPRGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLG 179
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V+ +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA L
Sbjct: 180 LDHVVTDLIPLDVFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAAL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A +G L F G++++ DG H + G DA IG +AA+ +R +
Sbjct: 240 DGSCRTPIAGYAAIEGGKLSFAGLIISPDGTQSHTIDLQGPAQDAALIGTEAARTVRAKA 299
Query: 301 NKNVFN 306
+ F+
Sbjct: 300 GEKFFD 305
>gi|293604316|ref|ZP_06686723.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553]
gi|292817193|gb|EFF76267.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553]
Length = 315
Score = 265 bits (676), Expect = 7e-69, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 163/306 (53%), Gaps = 3/306 (0%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++G
Sbjct: 1 MSLPQRLVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ L
Sbjct: 59 GKGLFVKELENALLDGRADLAVHSLKDVPVDLQAPFELCAILDRADPRDAFVSNRYAGLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG++RL
Sbjct: 119 DLPAGAVVGTSSLRRESQIRARFPTLVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLQRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I+ +L+ D P+ GQGA+ IE + + + + T V ERA +
Sbjct: 179 GLESRIRSLLDPADSLPAAGQGALGIEIRNDRDDMRAWLAPLISAATTSCVQAERAVSRK 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ +A FA G TL +V + DG R+G DA +G AAQ +
Sbjct: 239 LGGSCQVPLAAFAEISGDTLSLRALVASPDGVRMVHTRRSGPVADAQALGEAAAQELLDA 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAAAIL 304
>gi|269468208|gb|EEZ79901.1| porphobilinogen deaminase [uncultured SUP05 cluster bacterium]
Length = 304
Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +I TR SPLAL A ++ L H P NI ++ ++T+GD+I N L++IGGK
Sbjct: 1 MNKTLKIATRKSPLALWQAEHVKTRLETHH--PDLNIELVKMTTQGDQILNSPLSKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KDMP ++ +G + A L RE+ D F+S+ ++ DL
Sbjct: 59 GLFIKELEVGMMEGVADIAVHSMKDMPYEIPQGFALGAILKRENPFDAFVSNHFDNIDDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT S+RR L R D+ ++D RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 119 PQCAKVGTCSMRRIVQLKAIRPDLEILDLRGNVNTRLKKLDDGEYDAIILACAGLIRLGF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK+ ++ E P+ GQGA+ IE N+ + +L+ + +T V+ ERA +L+
Sbjct: 179 EDRIKQQISPEQSLPAVGQGAVGIEIRENDQEILDLITPLIDVETTHRVSAERAMNEKLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C IAGF+ + + G+V D + G+ A +G + A + +
Sbjct: 239 GGCSVPIAGFSTIDNNQMTLTGLVGNVDTGTILKQQVCGDVAKAEALGVELADKLLSLGA 298
Query: 302 KNVF 305
++V
Sbjct: 299 RDVL 302
>gi|241206704|ref|YP_002977800.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860594|gb|ACS58261.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 309
Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats.
Identities = 164/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D
Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGLVETRLRKLEQGEVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARVDDLLAPVNDGPTFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|116254224|ref|YP_770062.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258872|emb|CAK09980.1| putative porphobilinogen deaminase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 309
Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats.
Identities = 163/306 (53%), Positives = 217/306 (70%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D
Sbjct: 61 KGLFTEELEQKLTAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGEVDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L
Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARIDDLLAPVNDIMTFDTVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R +
Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300
Query: 301 NKNVFN 306
F+
Sbjct: 301 GSAFFD 306
>gi|89069761|ref|ZP_01157097.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516]
gi|89044707|gb|EAR50818.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516]
Length = 313
Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats.
Identities = 132/305 (43%), Positives = 176/305 (57%), Gaps = 1/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P +IGTR SPLALA A ETR L H +P ++ + T GDR+ +R L EIGGKG
Sbjct: 8 DRPLKIGTRGSPLALAQAHETRDRLAAAHGLPGEAFEVVVIRTTGDRVVDRPLKEIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE+ ++SG ID AVHS KDMP +GL + YLPRED RD F+S +K L
Sbjct: 68 LFTKEIEEAMLSGAIDIAVHSMKDMPVAQPEGLVLDCYLPREDPRDAFVSLLHAGIKALP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRRKA LL R D+ V++FRG ++TRL KL + A A LA AG+ RL +
Sbjct: 128 DGATVGTSSLRRKAQLLHRRPDLHVVEFRGNVQTRLRKLESGVAVATFLAVAGLNRLGAD 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + + ED P+ QGAI IE ++ E++ I+ T + + ERAFLA LDG
Sbjct: 188 DVPQAPIAPEDMLPAVAQGAIGIERRASDEGLGEMLAAIHDRATGERLAAERAFLAALDG 247
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
SC++ IAG A G L G +LA DG D +G D A+ + +
Sbjct: 248 SCETPIAGLAELIGDGRLRLRGEILAHDGSRCLADEAEAQIADGAALGTDMARRLLAQAG 307
Query: 302 KNVFN 306
F+
Sbjct: 308 PGFFD 312
>gi|332706560|ref|ZP_08426621.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L]
gi|332354444|gb|EGJ33923.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L]
Length = 322
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L P + +ST GD+I + L++IG KGL
Sbjct: 10 RTIRIGSRKSQLALIQTYWVQEQLKK--HFPDREFEVQTMSTHGDKILDVALSKIGDKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120
FT+E+E ++ EID AVHS KD+PT+L +GL + RE+ D + H + ++
Sbjct: 68 FTKELELGMLRDEIDFAVHSLKDLPTRLPEGLVLGCVTERENPADALVMHQKHLDKQIET 127
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S+IGTSSLRR A L +S D RG + TRL KL+ A++LA AG+KRL
Sbjct: 128 LPEGSIIGTSSLRRLAQLRYHFPHLSFKDVRGNLNTRLAKLDAGDYDALILAVAGLKRLD 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL E + GQGA+ IE ++ + EL+ I H T ER+ L L
Sbjct: 188 MSDRIHQILPPEISLHAVGQGALGIECREDDQEVLELLNAIAHPPTAQRCYAERSLLRAL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +G+TL IV + DG+ + + G + A N+G + A+ ++
Sbjct: 248 EGGCQVPIGVDTQLEGNTLTLTAIVASVDGQKLVKDTIQGEQSQAENLGLELAEQLKKQG 307
Query: 301 NKNVF 305
+ +
Sbjct: 308 AQEIL 312
>gi|33593520|ref|NP_881164.1| porphobilinogen deaminase [Bordetella pertussis Tohama I]
gi|39931430|sp|Q7VVU9|HEM3_BORPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33572876|emb|CAE42812.1| porphobilinogen deaminase [Bordetella pertussis Tohama I]
gi|332382928|gb|AEE67775.1| porphobilinogen deaminase [Bordetella pertussis CS]
Length = 314
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 158/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF
Sbjct: 7 LTIATRASRLALWQAEHVRDLLRARY--PACSVELLTLTTRGDQILDRTLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL +
Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I
Sbjct: 125 AVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L +D P+ GQGA+ IE + ++ + T V ERA L GSC+
Sbjct: 185 RALLEPDDSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A G L +V A DG+ R G R A IG AA+ + +
Sbjct: 245 VPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>gi|149915548|ref|ZP_01904074.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b]
gi|149810440|gb|EDM70283.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b]
Length = 304
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 127/302 (42%), Positives = 177/302 (58%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR SPLALA A+ETRS L +PP I+ + T GDRI +R L EIGGKGLFT
Sbjct: 1 MKLGTRGSPLALAQAYETRSRLSAAFDLPPEAFEIVVIKTTGDRIIDRPLKEIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE+ ++SGEID A+HS KDMP +GL + YLPRED+RD F+S L DL +
Sbjct: 61 REIEEAMLSGEIDIAIHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSPHVGGLADLEPGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V
Sbjct: 121 KVGTSSLRRKAQVLVAYPHLDVVEFRGNVQTRLKKLQDGVAACTFLAMAGLNRLGRSEVA 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ QGAI IE ++ + E++ I+ T + ERAFLA LDGSC+
Sbjct: 181 TAAIETDEMLPAVAQGAIGIERRRDDTRTAEMLAAIHDTPTGQRLAAERAFLAALDGSCE 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ IAG A G TL G VL DG + ++ D +G + + + + F
Sbjct: 241 TPIAGLAELDGGTLRLRGQVLRPDGSEALDDDQSAPIEDGAKLGHEMGRKLLERAGPGFF 300
Query: 306 NF 307
++
Sbjct: 301 DW 302
>gi|302038053|ref|YP_003798375.1| porphobilinogen deaminase [Candidatus Nitrospira defluvii]
gi|300606117|emb|CBK42450.1| Porphobilinogen deaminase [Candidatus Nitrospira defluvii]
Length = 310
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +GTR S LA+ + ++ L ++ P I + + T GD+I + L +IGG
Sbjct: 1 MNRSTLILGTRGSKLAVHQSQWVQARLQEL--APGLTISLQRIQTSGDKILDVPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE L+S EID AVHS KD+PT L +GL I PRED RD I+ L
Sbjct: 59 KGLFVKEIEDALLSKEIDLAVHSMKDVPTALPEGLDILCVPPREDPRDALITRDGCRLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR+A LL +R D ++ RG ++TRL KL + AI+LA AG++RL
Sbjct: 119 LKPGAKIGTSSLRRQAQLLHYRPDFTIEMLRGNLDTRLRKLREGQFDAIVLAAAGLRRLA 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L + P+ QGA+ IE ++ +EL+ H T +V ERA L L
Sbjct: 179 WDAEITEYLPVHLSLPAIAQGALGIEARSDDTFVRELLSRFEHRPTRITVTAERALLHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA A +G L G+V + DG+ G +A +G A+ +
Sbjct: 239 EGGCQVPIAAHAALEGDRLTVDGLVASVDGRRVIRHQIQGPASEAQALGTKLAERLLADG 298
Query: 301 NKNVF 305
+
Sbjct: 299 GDVIL 303
>gi|254511195|ref|ZP_05123262.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11]
gi|221534906|gb|EEE37894.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11]
Length = 318
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 126/307 (41%), Positives = 176/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L +P I+ + T GD +R L E+G
Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLSTAFDLPEDAFEIVVIKTTGDNRAMIDADRPLKEVGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ GEID AVHS KDMP +GL + +LPRED+RD FIS S+ D
Sbjct: 71 KGLFTKEIEEAMLKGEIDIAVHSTKDMPVAQPQGLVLDTFLPREDVRDAFISPGLNSIHD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG++RL+
Sbjct: 131 LPRGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLKKLADGVADCTFLAMAGLRRLE 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V ++ +D P+ QGAI IE ++ +A ++ I+H +T + ER+ LA L
Sbjct: 191 MADVPATAISPDDMLPAIAQGAIGIERRNDDSRAAGMLAAIHHPETAQRLAAERSLLAGL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A + L G VL DG G +G+ A + +
Sbjct: 251 DGSCETPIAGLAEIRDGQLRLRGEVLRPDGTESIHEEAFGPVESGAKMGQAMADTLLKKA 310
Query: 301 NKNVFNF 307
N F++
Sbjct: 311 GPNFFDW 317
>gi|257059870|ref|YP_003137758.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802]
gi|256590036|gb|ACV00923.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802]
Length = 320
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KG
Sbjct: 7 TRSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E + ++D AVHS KD+PT L GL + R D D + + + L
Sbjct: 65 LFTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNQKHLDKQLD 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL E
Sbjct: 185 DMSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R
Sbjct: 245 LEGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLREA 304
Query: 300 SNKNVF 305
V
Sbjct: 305 GAGEVL 310
>gi|194367302|ref|YP_002029912.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3]
gi|238059002|sp|B4SJT8|HEM3_STRM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194350106|gb|ACF53229.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3]
Length = 303
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + + A L R D D F+S+ SL L +
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFALPAMLTRHDPADGFVSNLYASLDALPIG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRALRPDLQLLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGER 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L + P+P QGA+ +E +N + L ++ T V ERA L GSC
Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGSNARLMALFAGLDDAATRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A A +G L+ G+V ++ G D +G+ A+ + +
Sbjct: 241 HVPVAAIAQWQGQDLHLQGLVGSASDGRAVRAEAVGPASDPEVLGQRVAKMLLDAGAGEL 300
Query: 305 FN 306
N
Sbjct: 301 LN 302
>gi|218246829|ref|YP_002372200.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801]
gi|218167307|gb|ACK66044.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801]
Length = 320
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KG
Sbjct: 7 TRSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E + ++D AVHS KD+PT L GL + R D D + H + L
Sbjct: 65 LFTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNKKHLDKQLD 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL E
Sbjct: 185 DMSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R
Sbjct: 245 LEGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLREA 304
Query: 300 SNKNVF 305
V
Sbjct: 305 GAGEVL 310
>gi|261856741|ref|YP_003264024.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2]
gi|261837210|gb|ACX96977.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2]
Length = 319
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 157/301 (52%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ L +H P + ++ ++TKGD++ + L +IGGKGLF
Sbjct: 11 IRIATRESPLAMWQTEFVADELRRLH--PGLRVELVSMTTKGDQLLDSPLAKIGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P + GL++ A L D RD F+S+ +SL L +
Sbjct: 69 KELELALMDGRADIAVHSMKDVPMRFPDGLELIAILEGHDPRDAFVSNEYESLAALPAGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ + + + RG I++R+ KL+ AI+LA AG+KR+ + I
Sbjct: 129 VVGTSSLRRETQIRSRYPQLEIKMLRGNIQSRMAKLDRGDYDAIILAAAGLKRMGYDARI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ E+ PS GQGA+ IE ++ L+ + H T V ERAF L+G C+
Sbjct: 189 RAELSPEESLPSVGQGALGIEARSDDAAIHALIAPLIHAATTTRVLAERAFNTRLNGGCQ 248
Query: 246 SAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
I G+A + L+ G+V DG + G + +G A+ + +
Sbjct: 249 VPIGGYAMLQDDGNLWLRGMVGRPDGTLTLRDEITGAATEGEALGVALAERMLAAGADKI 308
Query: 305 F 305
Sbjct: 309 L 309
>gi|254522867|ref|ZP_05134922.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14]
gi|219720458|gb|EED38983.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14]
Length = 303
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 158/302 (52%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF
Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL+ L +
Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFALPAMLTRHDPADGFVSNLYASLEALPIG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL +
Sbjct: 121 ARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGQR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L + P+P QGA+ +E N + L ++ T V ERA L GSC
Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAGLDDASTRACVEAERAMNRALHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+A A +G L+ G+V ++ G D +G+ A + +
Sbjct: 241 HVPVAAIAQWQGDDLHLQGLVGSASDGRAVRAEAVGPASDPDALGQRVATMLLDAGAGEL 300
Query: 305 FN 306
N
Sbjct: 301 LN 302
>gi|119511003|ref|ZP_01630124.1| porphobilinogen deaminase [Nodularia spumigena CCY9414]
gi|119464348|gb|EAW45264.1| porphobilinogen deaminase [Nodularia spumigena CCY9414]
Length = 323
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + R L P + + +ST+GD I + L +IG KG
Sbjct: 9 TRTIRIGSRKSQLALVQTYWVRDQLQK--SFPDISFEVHTMSTQGDNILDVALAKIGDKG 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
LFT+E+E +++ EID AVHS KD+PT L GL ++ RE+ D + H + ++
Sbjct: 67 LFTKELEVGMLNQEIDFAVHSLKDLPTNLPSGLTLAVITERENPADALVVHDKYKDKQIE 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L + D RG + TRL KL++ + A++LA AG++RL
Sbjct: 127 TLPAGAVIGTSSLRRLAQLRNKFPHFTFKDVRGNLNTRLKKLDSGEYDALILAAAGLERL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +IL E + GQGA+ IE ++ + ++K I H +T D ERAFL
Sbjct: 187 GMSDRIHQILPKEISLHAVGQGALGIECRADDKEIINILKAIEHSETRDRCLAERAFLRI 246
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I G L GIV + DG+ + + G DA +G + A +R
Sbjct: 247 LEGGCQVPIGVNTVIDGDNLTLTGIVASVDGQKLVKDTVTGAAKDAEKLGAELAALLREQ 306
Query: 300 SNKNVFN 306
+ +
Sbjct: 307 GAQEILE 313
>gi|186683929|ref|YP_001867125.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102]
gi|186466381|gb|ACC82182.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102]
Length = 336
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL
Sbjct: 23 RTIRIGSRKSQLALVQTYWVQEQLQK--SFPDITFEVHTMSTQGDKILDVALAKIGDKGL 80
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E +++ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 81 FTKELEVGMLNQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVVHEKHKDKQIDT 140
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL
Sbjct: 141 LPEGAVIGTSSLRRLAQLRHHFPHFTFKDVRGNLITRLAKLDAGEYDALILAAAGLERLG 200
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +I+ E + GQGA+ IE ++ + L+K I H T D ER+FL L
Sbjct: 201 MSDRVHQIIPKEISLHAVGQGALGIECRADDSELLTLLKAIEHPATRDRCLAERSFLRSL 260
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I G L GIV + DG+ + + G +A +G + A+ +R
Sbjct: 261 EGGCQVPIGVNTEISGENLTLTGIVASIDGQKLVKDTVTGIANNAEALGTELAELLRQQG 320
Query: 301 NKNVF 305
+ +
Sbjct: 321 AQEIL 325
>gi|192360982|ref|YP_001983840.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107]
gi|190687147|gb|ACE84825.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107]
Length = 315
Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 110/300 (36%), Positives = 170/300 (56%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A ++ L H P + ++PL+++GD+I + L ++GGKGLF
Sbjct: 8 LRIATRKSLLALWQADYVKTELERHH--PGLRVELVPLTSRGDKILDVPLAKVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L++G D AVHS KD+P + GL ++ PRED RD F+S+ SL DL +
Sbjct: 66 KELEQALLAGAADIAVHSMKDVPMEFPDGLGLAVICPREDARDAFVSNRFASLDDLPAGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ LL R D+ V RG ++TRL KL++ + AI+LA AG+ RL+ + I
Sbjct: 126 VVGTSSLRRQCQLLARRPDLQVKFLRGNVQTRLQKLDDGEYDAIILAAAGLIRLELQARI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ E P+ GQGA+ IE + + L++ ++H+ T + V ERA L G C+
Sbjct: 186 RSLIAPEVSLPAGGQGAVGIECRMQDQATLALLQPLHHQPTAEQVLAERAMNRRLQGGCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA +A +G L+ G+V A DG G + +G A+ + ++
Sbjct: 246 VPIACYALQQGGELWLRGLVGAPDGSQMLFDEIRGPVAEGEQMGIQLAERLLAAGADSIL 305
>gi|254466587|ref|ZP_05079998.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I]
gi|206687495|gb|EDZ47977.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I]
Length = 323
Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 137/307 (44%), Positives = 181/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETRS L +P I+ + T GD ++ L E+GG
Sbjct: 15 PLKIGTRGSPLALAQAYETRSRLAAAFDLPQEAFEIVVIRTTGDNQALIAADKPLKELGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD FIS +SL D
Sbjct: 75 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLALDTYLPREDVRDAFISPALKSLHD 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL+ A LA AG+ RL
Sbjct: 135 LAEGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVADCTFLAMAGLNRLA 194
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ +A E++ I+ +T + ERAFLA L
Sbjct: 195 MADVPANPIETSDMLPAVAQGAIGIERRADDGRAAEMLAAIHDGETGLRLAAERAFLAAL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A GSTL G VL DG + D +GR+ A + +
Sbjct: 255 DGSCETPIAGLAELHGSTLRLRGEVLRPDGSESISDDQTCPVEDGAELGREMAAKLLEKA 314
Query: 301 NKNVFNF 307
K F++
Sbjct: 315 GKGFFDW 321
>gi|332701796|ref|ZP_08421884.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay]
gi|332551945|gb|EGJ48989.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay]
Length = 316
Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 161/305 (52%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ I TR S LAL A +S L++ H + ++ L T+GD+I + L ++GGK
Sbjct: 1 MRTKLTIATRGSMLALWQAEHVKSMLVERHS--GLEVELLMLKTQGDKILDVPLAKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+ G D AVHS KD+PT+L +GL I RE+ D +S +L L
Sbjct: 59 GLFVKEIEEALLDGRADLAVHSMKDVPTELPEGLIIGVTPKREEPADALLSVRYDNLAAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSS RR+A LL R D + RG + TRL KL + + AI+LA AG+ RL
Sbjct: 119 PEGAVIGTSSFRRQAQLLMRRPDFEIKMLRGNVNTRLRKLMDGEYDAIVLAMAGLNRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+L DF P+ QG + IE ++ + +++ ++H +T V ER FL L+
Sbjct: 179 SAPKMEVLGPPDFLPAVSQGVLGIEYRRDDAELADMLAFMDHPETRVRVQAERGFLTALE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A +G + G+V DG+ R+ A +G A+ +
Sbjct: 239 GGCQVPIAGYAEVRGDEVRLTGLVADLDGRRVIRRERSSPAGQAWELGETLAREVLDAGG 298
Query: 302 KNVFN 306
+ +
Sbjct: 299 REILE 303
>gi|254414246|ref|ZP_05028013.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420]
gi|196178921|gb|EDX73918.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420]
Length = 321
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 163/306 (53%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + + +ST GD+I + L++IG KGL
Sbjct: 10 RTIRIGSRKSQLALVQTYWVQEQLHKHY--PDRDFEVQTMSTHGDKILDVALSKIGDKGL 67
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120
FT+E+E +++ EID AVHS KD+PT L +GL + RE+ D + H + L
Sbjct: 68 FTKELEVGMLNQEIDLAVHSLKDLPTALPEGLVLGCVTERENPADALVLHAKHQGKQLDT 127
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG+KRL
Sbjct: 128 LPEGAVIGTSSLRRLAQLRYHFPHFTFKDIRGNLNTRLGKLDAGEFDALILAAAGLKRLD 187
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ E + GQGA+ IE ++P+ +++K I H T ERAFL EL
Sbjct: 188 MSDRIHQVIPSEISLHAVGQGALGIECRGDDPEILDVLKAIEHSPTAQRCYAERAFLREL 247
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I KG+ L G+V DG + + G +A +G + AQ +R
Sbjct: 248 EGGCQVPIGVNTEIKGNNLILTGMVARLDGTSLIKDTVTGEATEAEALGVELAQLLRQQG 307
Query: 301 NKNVFN 306
+ + +
Sbjct: 308 AQEILD 313
>gi|33597222|ref|NP_884865.1| porphobilinogen deaminase [Bordetella parapertussis 12822]
gi|33601068|ref|NP_888628.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50]
gi|39931443|sp|Q7W785|HEM3_BORPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|39931458|sp|Q7WKM1|HEM3_BORBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33573649|emb|CAE37934.1| porphobilinogen deaminase [Bordetella parapertussis]
gi|33575503|emb|CAE32581.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50]
Length = 314
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 157/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF
Sbjct: 7 LTIATRASRLALWQAEHVRDLLRARY--PACSVELLTLTTRGDQILDRTLSKVGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL +
Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I
Sbjct: 125 AVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +L D P+ GQGA+ IE + ++ + T V ERA L GSC+
Sbjct: 185 RALLEPADSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A G L +V A DG+ R G R A IG AA+ + +
Sbjct: 245 VPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>gi|84685204|ref|ZP_01013103.1| porphobilinogen deaminase [Maritimibacter alkaliphilus HTCC2654]
gi|84666936|gb|EAQ13407.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2654]
Length = 319
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 136/310 (43%), Positives = 183/310 (59%), Gaps = 5/310 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEI 58
KP +IGTR SPLALA A+ETR L +P I+ + T GD +R L EI
Sbjct: 9 TKPLKIGTRGSPLALAQAYETRDRLAAAFDLPETAFEIVVIKTTGDDRAMIAADRPLKEI 68
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G KGLFT EIE +L++G ID AVHS KDMPT+ GL + YLPRED RD FIS +
Sbjct: 69 GNKGLFTREIEDQLLNGGIDLAVHSMKDMPTEQPPGLTLDCYLPREDTRDAFISLGGGGI 128
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
LA +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A A LA AGI R
Sbjct: 129 HGLAEGAVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLTKLRDGVAEATFLAMAGITR 188
Query: 179 LKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
L ++V + + ED P+ QGAI IE ++ ++++ I+H T + ER+FL
Sbjct: 189 LGMLDEVPHDAIAPEDMLPAIAQGAIGIERRSHDTNVADMLEAIHHGGTERRLAAERSFL 248
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A LDGSC++ IAG A G TL G +L +DG +G D ++GR AQ +
Sbjct: 249 ATLDGSCETPIAGLAEIDGGTLRLRGEILRTDGSEALADEISGAVEDGPDMGRALAQKLL 308
Query: 298 FISNKNVFNF 307
+ + F++
Sbjct: 309 SRAGPDFFDW 318
>gi|254483263|ref|ZP_05096495.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148]
gi|214036486|gb|EEB77161.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148]
Length = 310
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A R +LM H P + ++ ++++GD++ + L ++GG
Sbjct: 1 MPTRTLTIATRESPLALWQAEYVRDALMSAH--PRLEVNLLGMTSRGDQLLDVPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED D F+S+ +SL
Sbjct: 59 KGLFVKELETALLDGSADIAVHSMKDVPMSFPEGLTLGVICEREDPTDAFVSNNFESLAQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ V RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSVVGTSSLRRECQLRARRPDLQVKFLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + ++++D P+ GQGA+ IE + EL++ ++H T V ERA L
Sbjct: 179 FGERIADSISVDDSLPAGGQGAVGIELREGDGDVLELLQTVHHPLTAQRVIAERAMNQRL 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA FA L G+V DG + DA N+G A +
Sbjct: 239 NGGCQVPIACFAEYLDNGHLRLRGLVGRPDGSEVLRAEAISSPEDAENLGISVANELLVQ 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAAAIL 304
>gi|30248604|ref|NP_840674.1| porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718]
gi|39931498|sp|Q82WS2|HEM3_NITEU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30180199|emb|CAD84501.1| Porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718]
Length = 308
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 164/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K I +R S LAL A R L++++ P +I I+ ++TKGD+I + +L++IG
Sbjct: 1 MSSPKKIVIASRESQLALWQANFIRGRLLELY--PQTDITILGMTTKGDQILDVSLSKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L G D AVHS KD+P + G ++A RED RD F+S+ SL+
Sbjct: 59 GKGLFIKELELALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPAGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I +L E P+ GQGA+ IE N+P E +K ++H T V ERA
Sbjct: 179 ELGYRISMLLPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRM 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ + GFA L G V DG G +G+ AQ ++
Sbjct: 239 LGGSCQVPLGGFAEIFEDVLTLRGFVATPDGSRMIADKLCGKPESGEQVGQQLAQNLKAH 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAEEIL 304
>gi|170078218|ref|YP_001734856.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002]
gi|169885887|gb|ACA99600.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002]
Length = 321
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ RIG+R S LAL + R L + P + + T+GD++ + L++IG K
Sbjct: 7 SKRTVRIGSRKSQLALVQTYWVRDELQKAY--PEITFEVQTMETQGDKVLDVALSKIGDK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E ++ GE D AVHS KD+PT L +GL + R D D + H + L
Sbjct: 65 GLFTQELEDGMLKGETDFAVHSLKDLPTNLPEGLMLGCVTERVDPADALVVNEKHRDKKL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ L SVIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++R
Sbjct: 125 ETLPSGSVIGTSSLRRLAQLRHHFPHLEFKDIRGNVNTRLAKLDRGEYDAIILAAAGLQR 184
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-NHEDTWDSVNCERAFL 237
L I +I++ + + GQGA+ IE + + L++ + H ++ D ER+FL
Sbjct: 185 LDFGDRIHQIISSDISLHAVGQGALGIECRDGDEEILGLLRPVLEHAESRDRCYAERSFL 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+L+G C+ I +G L G+V + DG+ +G+R DA +G + AQ
Sbjct: 245 RQLEGGCQVPIGVNTTIEGDRLTLVGMVASLDGQTLIRDEVSGSRADAEKLGIELAQKAI 304
Query: 298 FISNKNVF 305
+
Sbjct: 305 AQGADKIL 312
>gi|110678608|ref|YP_681615.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114]
gi|109454724|gb|ABG30929.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114]
Length = 314
Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats.
Identities = 136/303 (44%), Positives = 182/303 (60%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLA+A AFETR+ LM +P + I+ + GD I +R L +IGGKGLF
Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPENAFTIVVIKVTGDMIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD FIS T + + DLA
Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLILDTYLPREDVRDAFISPTLKGIADLAQG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V
Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLACAGLSRLKMDEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + P+ QGAI IE + + EL+ I+ T + ER FL LDGSC
Sbjct: 191 PATPIETDHMLPAVAQGAIGIERRIADTNTAELLSAIHDGPTGQRLAAERNFLLTLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G L G VL DG R+G D +GRD A+ + + +
Sbjct: 251 ETPIAGLAELSGDHLRLRGEVLRPDGSEALNGERSGPISDGAAMGRDLAEKLLKRAGPSF 310
Query: 305 FNF 307
F++
Sbjct: 311 FDW 313
>gi|255658552|ref|ZP_05403961.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544]
gi|260849356|gb|EEX69363.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544]
Length = 315
Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 170/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ IGTR S LAL A L + P + ++TKGD+I + L +IGG
Sbjct: 1 MKNDTIVIGTRSSKLALWQADYVADCLRKRY--PELRVEKKLMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G ID AVHS KDMPT++ +GL ISA R D D +S ++L++
Sbjct: 59 KGLFTKELEQDMLAGGIDIAVHSLKDMPTEVPEGLVISAITERFDPGDAVVSPKYRTLEN 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRKA LL R D+ + D RG + TRL KL AI+LA AG+KRL
Sbjct: 119 LPQGAKVGTSSLRRKAQLLHARPDLQISDLRGNVNTRLEKLEREHFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L E P+ GQGA+ IET N+ + + L+ +N E T ERAFLA +
Sbjct: 179 FADRITEVLPREMVLPAVGQGALAIETRENDREVRNLIAFLNDEATVACARAERAFLARV 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A + L+ ++ + DG + + G+ +A ++G A + +
Sbjct: 239 EGGCQVPVGVYAVPEAEGRLHVEAVIASLDGARLYRDAAVGSAAEAESLGTALADKLLAM 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GGIAIL 304
>gi|254474607|ref|ZP_05087993.1| porphobilinogen deaminase [Ruegeria sp. R11]
gi|214028850|gb|EEB69685.1| porphobilinogen deaminase [Ruegeria sp. R11]
Length = 320
Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats.
Identities = 132/307 (42%), Positives = 180/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG
Sbjct: 12 PLKIGTRGSPLALAQAYETRARLAAAFDLPDDAFEIVVIKTTGDNQALIAADKPLKELGG 71
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP + GL + YLPRED+RD FIS + S+ D
Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVQQPDGLVLDTYLPREDVRDAFISPSLTSIHD 131
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A LL R D++V+ FRG ++TRL KL+ A LA AG+ RL
Sbjct: 132 LAKGAVVGTSSLRRRAQLLHRRPDLNVVQFRGNVQTRLRKLSEGVAECTFLAMAGLNRLA 191
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ +A +++ I+ + T + ERAFLA L
Sbjct: 192 MADVPANAIETNDMLPAVAQGAIGIERRTSDNRAADMLAAIHDQQTGQRLAAERAFLAAL 251
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+TL G VL DG + D +GR A + +
Sbjct: 252 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAISDDQRCPIEDGAELGRAMAAKLLDQA 311
Query: 301 NKNVFNF 307
+ F++
Sbjct: 312 GEGFFDW 318
>gi|114765839|ref|ZP_01444932.1| porphobilinogen deaminase [Pelagibaca bermudensis HTCC2601]
gi|114541838|gb|EAU44875.1| porphobilinogen deaminase [Roseovarius sp. HTCC2601]
Length = 319
Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats.
Identities = 131/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR L +P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAHETRDRLAAAFDLPQDAFEIVVIKTTGDDRAMIAADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE++L+SG ID AVHS KDMPT+ +GL + YLPRED RD FIS L
Sbjct: 71 KGLFTKEIEEQLLSGGIDIAVHSMKDMPTEQPEGLVLDCYLPREDERDAFISPGHAGLAA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++R+
Sbjct: 131 LPEGTVVGTSSLRRRAQLLNRRPDLQVVEFRGNVQTRLKKLEDGVAAATFLAMAGLRRMD 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ +D P+ QGAI IE ++ + +++ I+ DT + ER FLA L
Sbjct: 191 MTDIPMTAMSPDDMLPAIAQGAIGIERRSDDSRTGDMLAAIHDTDTATRLAAERTFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G L G +LA DG H +G D +GR A+ + +
Sbjct: 251 DGSCETPIAGLAELDGDRLRLRGEILAPDGSASHAGELSGPAADGPAMGRALAEELLARA 310
Query: 301 NKNVFNF 307
+ F +
Sbjct: 311 GPDFFAW 317
>gi|297617596|ref|YP_003702755.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680]
gi|297145433|gb|ADI02190.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680]
Length = 316
Score = 262 bits (668), Expect = 6e-68, Method: Composition-based stats.
Identities = 120/302 (39%), Positives = 173/302 (57%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A L D P H I + TKGD+IT+ L++IG KGLF
Sbjct: 10 KVRIGTRGSRLALWQANYVVKRLRDC--FPGHEFEITVIKTKGDKITDVALSKIGDKGLF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE L+ EID AVHS KD+PT L +G++++A L RE+ DV +S SL L
Sbjct: 68 TKEIEMALLREEIDIAVHSLKDLPTTLPEGIRLAAVLERENPLDVLLSFKGYSLSGLPRG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSSLRR A L R R DI ++ RG +ETR+ K+ + I+LAYAG+KR+ +
Sbjct: 128 ARIGTSSLRRTAQLKRLRPDIETVNLRGNVETRIRKMEDEGLDGIVLAYAGVKRMGFLHL 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ EIL+ + P+ GQG I +E + A+ELVK +NH+ TW + ERAFL ++G C
Sbjct: 188 VTEILHPDQVIPAVGQGVIALEIKEDGKVAEELVKPLNHQPTWAEITAERAFLKAIEGGC 247
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ A + L G+V + DG++ + +G+ A +G + A+ I + ++
Sbjct: 248 QVPCGCHASYQEGYLTVDGLVASLDGQVVYRDRVSGSEAFAQQLGEELARRILAMGGGSL 307
Query: 305 FN 306
Sbjct: 308 LE 309
>gi|260431649|ref|ZP_05785620.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157]
gi|260415477|gb|EEX08736.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157]
Length = 320
Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats.
Identities = 130/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR L D +P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAHETRQRLCDAFDLPEQAFEIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G ID AVHS KDMP + +GL + +LPRED+RD FIS S+ D
Sbjct: 71 KGLFTKEIEEAMLGGYIDIAVHSTKDMPVEQPQGLVLDTFLPREDVRDAFISPRLNSIHD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D++V++FRG ++TRL KL + A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLYRRPDLNVVEFRGNVQTRLKKLADGVAECTFLAMAGLRRLN 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V ++ +D P+ QG I IE ++ +A E+++ I+H +T + ERA LA L
Sbjct: 191 MQDVPATAISPDDMLPAIAQGTIGIERRADDHRAAEMLEAIHHPETAQRLAAERALLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A L G VL DG + G DA +GR A + +
Sbjct: 251 DGSCETPIAGLAEITDGQLRLRGEVLRPDGSESVVSEQMGATEDATEMGRAMASDLLRQA 310
Query: 301 NKNVFNF 307
F +
Sbjct: 311 GPGFFEW 317
>gi|114566228|ref|YP_753382.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318683|sp|Q0AZ43|HEM3_SYNWW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114337163|gb|ABI68011.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 306
Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats.
Identities = 123/303 (40%), Positives = 176/303 (58%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LAL A S L IP + I + T GD+I + L++IG KG
Sbjct: 1 MRNLRLGTRGSQLALWQARHVASLLES--SIPDLKVEIKTIKTTGDKILDVALSKIGDKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIEK+L+ GEID AVHS KD+P++L GL I+A L RED RDV +SH SL DL
Sbjct: 59 LFTKEIEKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSSLRR A L WR D+ ++D RG +ETR+ K+ I+LA AG+KRL E
Sbjct: 119 QAALIGTSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLE 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++I + L P+ GQG I +E + +L+ INH+D++ + ER FL EL G
Sbjct: 179 EMISDYLPAHLVLPAVGQGMIAVEARSDEQDVLKLLSRINHQDSFLAGQAERGFLHELGG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ +A A +G L+ G++ + DGK + S + + +A GR+ A+ +
Sbjct: 239 GCQVPVASLAELQGGQLHIRGLIASLDGKEKYSGSSDCSPPEAEEAGRELARSLLQQGGA 298
Query: 303 NVF 305
+
Sbjct: 299 AIL 301
>gi|323141796|ref|ZP_08076663.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067]
gi|322413719|gb|EFY04571.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067]
Length = 306
Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 173/304 (56%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K IGTR S LAL + + L + P +V+ + TKGDRI + L +IGGK
Sbjct: 1 MKAKLTIGTRQSLLALWQSNHIAALLRKEY--PECEVVLKKIVTKGDRILDVPLAQIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+EIE+ L+ G +D AVHS KDMPT L +GL ++A R ++ D F+S+ + ++L
Sbjct: 59 GLFTKEIEEDLLDGTVDLAVHSLKDMPTVLPEGLCLTAITERANVGDAFVSNKYATFEEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
L SV+GTSSLRRKA LL R D+ + D RG ++TRL KL+ AI+LA AG++RL
Sbjct: 119 PLGSVVGTSSLRRKAQLLAKRPDLEIRDLRGNVDTRLRKLDEGLYDAIILAAAGLERLGH 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I ++ + P+ GQGA+ IE + + ++++ +N +T + + ERAFL L+
Sbjct: 179 GDRISSLIPADVCLPAVGQGALAIEARTADKEVRDMLSFLNDLNTKQATDAERAFLGLLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A +G + I+ A DG + NG DA+++G+ + +
Sbjct: 239 GGCQVPIGVHADVEGENIRIEAIIAALDGSTILRDTINGKADDAVSLGQQLGKKMLAAGG 298
Query: 302 KNVF 305
+ +
Sbjct: 299 QEIL 302
>gi|119386338|ref|YP_917393.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222]
gi|166217779|sp|A1B853|HEM3_PARDP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119376933|gb|ABL71697.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222]
Length = 313
Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats.
Identities = 130/305 (42%), Positives = 179/305 (58%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ P RIGTR S LALA A ETR LM H + I+ + T GDR+ +R L EIGGKG
Sbjct: 8 QNPIRIGTRGSALALAQAHETRDRLMAAHGLAADAFRIVVIKTTGDRVLDRPLKEIGGKG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE L++ EID AVHS KDMPT +GL I YLPRED+RD F+S ++ +L
Sbjct: 68 LFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+G+SSLRR+A L R D+ +++FRG ++TRL KL + A A LA AG+ RL
Sbjct: 128 QGAVVGSSSLRRRAQLAARRPDLKLVEFRGNVQTRLKKLEDGVAVATFLAMAGLTRLGML 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + + ++ P+ QG I +E ++ + L+ I+ D+ V ERAFLA LDG
Sbjct: 188 HVARGAVEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRDSALRVTAERAFLARLDG 247
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A +G L G +L DG R G D +G D A+ +R +
Sbjct: 248 SCQTPIAGLAELQGDRLRLRGEILRPDGSEVIAAERVGPAADGAAMGTDLAEELRGRAPA 307
Query: 303 NVFNF 307
+ F++
Sbjct: 308 DFFDW 312
>gi|300024951|ref|YP_003757562.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526772|gb|ADJ25241.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888]
Length = 310
Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats.
Identities = 138/305 (45%), Positives = 184/305 (60%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RIGTR SPLALA A E R L H + I I + T GDR+T+R L++IGG
Sbjct: 1 MQAARIRIGTRGSPLALAQAHEVRDRLAKAHGLSEDAISITIIKTTGDRVTDRPLSDIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE L + EID AVHS KDM T+L GL + A LPRED RD FIS ++
Sbjct: 61 KGLFTKEIEDALFAREIDIAVHSMKDMQTELPDGLALGAVLPREDPRDAFISLKHANISA 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRRK+ +L R D+SVIDFRG +ETRL KL + A A LA AG+ RL
Sbjct: 121 LPTGAIVGTSSLRRKSQVLSIRPDLSVIDFRGNVETRLRKLKDGIAEATFLAVAGLNRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I I+ D P+ QGAI +E + +A+ V +N ++ +V ERAFLA L
Sbjct: 181 LSDRITAIVPSADMLPAAAQGAIGLEIRTGDKEAEAFVAPLNDVNSQRAVTAERAFLARL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+GSC++ IA A G L F G VL+ DG+ ++VSR+G + +IG AA + +
Sbjct: 241 EGSCRTPIAAHATIDGEQLSFRGQVLSLDGQQKYDVSRSGAANASRDIGLAAADEVLSKA 300
Query: 301 NKNVF 305
+ +
Sbjct: 301 DPALL 305
>gi|89056336|ref|YP_511787.1| porphobilinogen deaminase [Jannaschia sp. CCS1]
gi|88865885|gb|ABD56762.1| porphobilinogen deaminase [Jannaschia sp. CCS1]
Length = 318
Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats.
Identities = 128/307 (41%), Positives = 181/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P RIGTR SPLALA A ETR+ LM +P I+ + T GD + L E+GG
Sbjct: 11 PLRIGTRGSPLALAQARETRARLMAAWDLPEDAFEIVVIKTTGDDRSLIDADVALKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++ ID AVHS KDMPT GL + YLPRED+RD F+S L
Sbjct: 71 KGLFTKEIEEDMLTSSIDIAVHSMKDMPTVQPDGLMLDCYLPREDVRDAFVSVNHDGLHA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++G+SSLRR+A L R D++V++FRG ++TR+ KL A A LA AG++RL
Sbjct: 131 LPEGAIVGSSSLRRRAQLFARRPDLNVVEFRGNVQTRMKKLGGGVADATFLAMAGLRRLG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+V+K + +ED P+ QGAI IE V++ +A +++ I++ +T + ER+FL L
Sbjct: 191 MEEVVKSAIEVEDMLPAVAQGAIGIERRVSDTRAGDMLAAIHNTETGQRLAAERSFLKGL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IA A G TL G +L DG R D +G D A+ +R +
Sbjct: 251 DGSCQTPIAALAELDGGTLRLRGEILRPDGSEVLTDDRTAPIEDGAALGADMARDLRARA 310
Query: 301 NKNVFNF 307
F++
Sbjct: 311 GDGFFDW 317
>gi|254515499|ref|ZP_05127559.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3]
gi|219675221|gb|EED31587.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3]
Length = 308
Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 166/300 (55%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLAL A+ R +L+ +H P ++ ++ ++++GD+I + L ++GGKGLF
Sbjct: 5 VVIATRESPLALWQAYFVRDTLLKMH--PGISVELLGMTSRGDQILDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G AVHS KD+P + GL+++ RE+ D F+S+ ++L L +
Sbjct: 63 KELETALLDGRAHIAVHSMKDVPMEFPDGLELAVICEREEPADAFVSNNYENLDALPPGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ L R D++V RG + TRL KL+ + AI+LA AG+ RL+ + I
Sbjct: 123 VVGTSSLRRECQLRANRPDLTVRFLRGNVNTRLRKLDEGEYDAIILACAGLIRLEMGERI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + + P+ GQGA+ IE ++ +EL+ ++H T + V ERA L G C+
Sbjct: 183 RARIPVTESLPAGGQGAVGIEIRSDDSATRELLAPLHHGPTAERVLAERALNRRLQGGCE 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA +A +G L+ G+V DG G+R + +G A + +
Sbjct: 243 VPIAAYAVHEGDQLWLRGLVGRPDGSNTLRADARGSRDNPEALGITVADALLEAGAAEIL 302
>gi|113952874|ref|YP_731239.1| porphobilinogen deaminase [Synechococcus sp. CC9311]
gi|122945597|sp|Q0I8I3|HEM3_SYNS3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|113880225|gb|ABI45183.1| porphobilinogen deaminase [Synechococcus sp. CC9311]
Length = 316
Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 156/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEYT 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L S++GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRYHYPHLQFKDVRGNVITRLEKLDSGNYDCLILAAAGLS 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + GQGA+ IE + P+ EL++V+NH T ERAFL
Sbjct: 179 RLGFGDRIHQSIPGNISLHAVGQGALGIECVCDRPEVMELIQVLNHAPTSARCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I +G T+ G+V + DGK + G D +GRD A ++
Sbjct: 239 RVLEGGCQVPIGVNTQIEGDTIQLTGMVASLDGKRLIRDEQAGPLADPEAVGRDLAHKLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 DQGAGEIL 306
>gi|159903036|ref|YP_001550380.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211]
gi|238058998|sp|A9BEB6|HEM3_PROM4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|159888212|gb|ABX08426.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211]
Length = 316
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 161/308 (52%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR S LA+ + L H P NI I ++T+GD+I + L +IG
Sbjct: 1 MVLDQLRIATRRSKLAMVQTHWVKEQLEKAH--PGINISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNKSLKDKQ 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LHELPPGTILGTSSLRRLAQLRHHYPHLIFKDVRGNLITRLEKLDAGAYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + +++ E + GQGA+ IE N P+ E++K + HE+T ER+FL
Sbjct: 179 RLGFGDRVHQLIPCEISLHAVGQGALGIECVENKPEVLEIIKSLEHEETSQRCLSERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + G L G+V + DGK + S+ G++ + IG++ A ++
Sbjct: 239 RELEGGCQVPIGVNSQISGQDLILTGMVASLDGKKLIKDSKRGDKSNPELIGKELANELK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 SQGAMEIL 306
>gi|163745168|ref|ZP_02152528.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45]
gi|161381986|gb|EDQ06395.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45]
Length = 315
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 132/304 (43%), Positives = 179/304 (58%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P IGTR S LALA A E R L +P I+ + T GD+I +R L EIGGKGL
Sbjct: 10 RPLNIGTRGSLLALAQANEVRDRLAAAFDLPFEAFTIVVIKTTGDKIIDRPLKEIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L+ G ID AVHS KDMPT GL I YLPRED+RD FIS +S+ DL
Sbjct: 70 FTREIEAALLDGSIDIAVHSMKDMPTLQPGGLVIDTYLPREDMRDAFISPHLKSIADLPE 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A + R D+ V++FRG ++TRL KL + A A LA AG+ RLK ++
Sbjct: 130 GAVVGTSSLRRRAQVKLRRPDLEVVEFRGNLQTRLKKLEDGVAEATFLAMAGLNRLKMDE 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V K ++ +D P+ QGAI IE +++ +A +++ I+ T + + ERAFLA LDGS
Sbjct: 190 VPKAAVHTDDMLPAIAQGAIGIERRMDDTRAADMLAAIHDRATGEQLAAERAFLATLDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C++ IAG A G+ + G VL DG D GR+ A+ + +
Sbjct: 250 CETPIAGLAELNGTNMRLRGQVLRPDGSDAIGDDVTCTISDGAEAGREMARKLLAEAGPG 309
Query: 304 VFNF 307
F++
Sbjct: 310 FFDW 313
>gi|147677307|ref|YP_001211522.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI]
gi|189028095|sp|A5D3L5|HEM3_PELTS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146273404|dbj|BAF59153.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI]
Length = 312
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +GTR S LA+ A L ++ P + I+ + T GDRI + L +IG K
Sbjct: 1 MKREIAVGTRVSKLAMWQARWVVDRLKEL--CPGCSFRIVGIRTLGDRILDAALVKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E ++ GEID AVHS KD+PT+L +GL I A RE DV +S + L +L
Sbjct: 59 GLFTKELEAAMLRGEIDMAVHSMKDLPTELPEGLVIGAVCKREHPADVLVSRRGKKLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR A LL +R D+ +++ RG I TRL KL A +LAYAG+ R+ +
Sbjct: 119 PGGALVGTSSLRRCAQLLWYRDDLRMVNLRGNINTRLRKLEEENLDAAVLAYAGLFRMGR 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I +++ + P+ GQG+I +E ++ + ELVK I+H ++ +V ERAFL L+
Sbjct: 179 QDAITQVIPFDICLPAVGQGSIGVEVRSDDGEVLELVKKIDHRESRLAVFAERAFLRRLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ + + L G+V DGK GN DA IG A+ + +
Sbjct: 239 GGCQVPVGALGTVENDRLRLEGVVATPDGKQLVRSFVEGNGGDAAAIGLRLAEKLLELGA 298
Query: 302 KNVF 305
+
Sbjct: 299 GEIL 302
>gi|302342250|ref|YP_003806779.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075]
gi|301638863|gb|ADK84185.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075]
Length = 310
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 117/301 (38%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LALA A L + P + + TKGD+I + L ++GGKGLF
Sbjct: 3 KLIIATRGSELALAQARWAARQLSALS--PGLEVELQLFKTKGDKILDAPLAKVGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ G AVHS KDMP +L GL I+A RED RDV IS L +L
Sbjct: 61 VKEIEDALLDGRARVAVHSMKDMPAELPPGLCIAAVSRREDPRDVLISRDGLGLDELPAT 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSSLRR+A LL R D V+ RG ++TRL KL AI+LA AG+ RL
Sbjct: 121 PRLGTSSLRRQAQLLARRPDAMVVSVRGNVQTRLRKLEELGLDAIVLAAAGLDRLGLSDP 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L E P+ GQGA+ IE ++ EL + H+ T +V ERAFL L+G C
Sbjct: 181 RRVDLAPELMLPAVGQGALAIEARADDAFCLELCARLAHQPTAVAVEAERAFLGRLEGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG A G + F G+V + DGK G +A +G A+ I + +
Sbjct: 241 QVPIAGHAVVDGDEIVFEGLVASLDGKRLIRRRAVGRADEAGPLGLAVAEEILADGGRQI 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|226311390|ref|YP_002771284.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599]
gi|259647803|sp|C0ZAH1|HEM3_BREBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226094338|dbj|BAH42780.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599]
Length = 309
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 165/300 (55%), Gaps = 5/300 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF +
Sbjct: 5 KVGTRRSKLALTQTNWVVDKLK--GFAPEADFELHEIVTKGDRILDVTLSKVGGKGLFVK 62
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L E D AVHS KDMP +L GL I A R D RDV +S ++L +L ++
Sbjct: 63 EIEQSLFDKETDFAVHSLKDMPAELPDGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGAL 122
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR + +L +R DI + RG I+TR+ KL AI+LA AG++R+ E I
Sbjct: 123 VGTSSLRRSSQILAYRPDIQIESLRGNIDTRMRKLAEGNFDAIILAAAGLERVNFEGEIS 182
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ L +E P+ GQGA+ IE ++ + L+K + T +V+ ER+FL +L G C+
Sbjct: 183 QFLPVEISLPAVGQGALAIECRADDEETLALLKQFDDAPTRLAVSAERSFLHKLQGGCQV 242
Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +A + + + G+V + DGK + + G D + +G A+ + +V
Sbjct: 243 PIGAYATVGENNEITLTGMVGSPDGKQMFKNTATG--QDPLALGIQVAEALLAQGAGDVL 300
>gi|282901179|ref|ZP_06309108.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505]
gi|281193879|gb|EFA68847.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505]
Length = 322
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 159/306 (51%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KGL
Sbjct: 9 RIIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
FT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + L
Sbjct: 67 FTKELELGMINQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVFHQNHLGQTLAT 126
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
SVIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 127 LPPGSVIGTSSLRRLAQLRHKFPHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLN 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I EIL + + GQGA+ IE N+ + ++K I H T D ER+FL L
Sbjct: 187 MHHRIHEILPPDISLHAVGQGALGIECRENDLELITILKAIEHPQTRDRCLAERSFLRSL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I G TL GIV + +G+ + + G DA +G A +R
Sbjct: 247 EGGCQVPIGVNTEIDGETLTLTGIVASVNGENLVKNTITGAATDAEKLGTQLANILREQG 306
Query: 301 NKNVFN 306
+
Sbjct: 307 ATEILE 312
>gi|304436298|ref|ZP_07396276.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370703|gb|EFM24350.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 311
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A ++ H P + + L+TKGDRI + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQANYVAEAIKKEH--PSCCVELRELTTKGDRILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ ++ +D AVHS KDMPT++ GL I A R D D F+S +++D
Sbjct: 59 KGLFTKELEQAMLDDAVDLAVHSLKDMPTEIPDGLVIGAITTRLDPGDAFVSAHYAAVED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + + +GTSSLRR+A LL R D+++ D RG + TRL KL+ + AI+LA AG+KRL
Sbjct: 119 LPVGARVGTSSLRRRAQLLAVRPDLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I+ IL P+ GQGA+ IE + ++ + + ERAFL +
Sbjct: 179 FERRIRTILPRSVMLPAVGQGALAIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRV 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A + ++ + DG+ +G A +G A+ +
Sbjct: 239 EGGCQIPVGVYAEVDANGQISIDAMIASVDGQRICRSDAHGAGEQAEALGTALAEELLDA 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GGREIL 304
>gi|149199469|ref|ZP_01876504.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa
HTCC2155]
gi|149137404|gb|EDM25822.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa
HTCC2155]
Length = 307
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 112/301 (37%), Positives = 167/301 (55%), Gaps = 3/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LAL A +S L++V P I + + T+GD+I + +L +IGGKGLF
Sbjct: 2 KLRIATRGSQLALWQAEHVKSRLLEV--DPSLEIELKIIKTQGDKILDVSLAKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ ++ E D AVHS KD+P +L +GL + A L RED RD F+S+ +SL +L
Sbjct: 60 VKEIEQAMMDDEADLAVHSMKDVPAELPEGLILQAILEREDPRDAFVSNKYKSLDELPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR + L R + RG + TRL KL+++K AI+LA AG+ RL+
Sbjct: 120 AVVGTSSLRRASQLYRQYP-VKTELLRGNVNTRLAKLDDDKYDAIILAAAGLIRLEFGDR 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + L+ + F PSPGQGA+ IE ++ + L+ +NH +T V ER F + GSC
Sbjct: 179 IADSLDPDKFIPSPGQGAVGIECREDDAELCALLNKLNHTETSIRVKVEREFNLAIGGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A G + V + DGK ++ +G+ D G + A + +
Sbjct: 239 QVPAGCYATIDGDSFELRAFVASPDGKEYYREDMSGDLKDLPGKGTEIANKLIARGAAEI 298
Query: 305 F 305
Sbjct: 299 I 299
>gi|163733941|ref|ZP_02141383.1| porphobilinogen deaminase [Roseobacter litoralis Och 149]
gi|161393052|gb|EDQ17379.1| porphobilinogen deaminase [Roseobacter litoralis Och 149]
Length = 314
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 135/303 (44%), Positives = 181/303 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLA+A AFETR+ LM +P I+ + GD I +R L +IGGKGLF
Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPEDAFSIVVIKVTGDMIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD F+S T + DLA
Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLVLDTYLPREDVRDAFVSPTLSGIADLAQG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V
Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLASAGLNRLKMDEV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ ++ P+ QGAI IE + + +L+ I+H +T + ER+FL LDGSC
Sbjct: 191 PATPIEADEMLPAVAQGAIGIERRMADQNTADLLSAIHHIETGQRLTAERSFLLTLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G L G VL DG R+G D +GR AQ + +
Sbjct: 251 ETPIAGLAELDGDQLRLRGEVLRPDGSESLAGERSGPIADGAEMGRILAQELLDRAGPKF 310
Query: 305 FNF 307
F +
Sbjct: 311 FEW 313
>gi|282895464|ref|ZP_06303601.1| Porphobilinogen deaminase [Raphidiopsis brookii D9]
gi|281199497|gb|EFA74360.1| Porphobilinogen deaminase [Raphidiopsis brookii D9]
Length = 322
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KGL
Sbjct: 9 RTIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120
FT+E+E +I+ EID AVHS KD+PT L GL ++A RE+ D + H +L
Sbjct: 67 FTKELELGMINQEIDFAVHSLKDLPTNLPAGLTLAAITARENPADAVVFHQNHLGQTLDT 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SVIGTSSLRR A L S + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 127 LPPGSVIGTSSLRRLAQLRHKFSHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLN 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL + + GQGA+ IE N+ + ++K I H T D ER+FL L
Sbjct: 187 MHHRIHQILPPDISLHAVGQGALGIECRENDSELITILKAIEHPQTRDRCLAERSFLRSL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I G +L GIV + +G+ + + G DA +G A +R
Sbjct: 247 EGGCQVPIGVNTEIDGESLTLTGIVASVNGENLVKNTITGAAADAEKLGTQLANILREQG 306
Query: 301 NKNVFN 306
+
Sbjct: 307 ATEILE 312
>gi|126732359|ref|ZP_01748159.1| porphobilinogen deaminase [Sagittula stellata E-37]
gi|126707228|gb|EBA06294.1| porphobilinogen deaminase [Sagittula stellata E-37]
Length = 316
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 137/309 (44%), Positives = 185/309 (59%), Gaps = 4/309 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEI 58
P +IGTR SPLALA AFETR LM +P I + T GD +R L EI
Sbjct: 7 NSPLKIGTRGSPLALAQAFETRERLMAAFSLPEDAFEICIIKTTGDDRAMIAADRPLKEI 66
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G KGLFT+EIE+ L++G ID AVHS KDMPT+ +GL + YLPRED RD FI H S+
Sbjct: 67 GNKGLFTKEIEEALVAGRIDIAVHSMKDMPTEQPEGLILDCYLPREDPRDAFICHDHGSI 126
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL + +V+G+SSLRR+A LL R D+ V++FRG ++TRL KL++ A A LA AG+ R
Sbjct: 127 HDLPVGAVVGSSSLRRRAQLLHRRPDLDVVEFRGNLQTRLKKLSDGVATATFLACAGLNR 186
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+K V + D P+ QGAI IE +++ QE++ I+ DT + ERAFLA
Sbjct: 187 MKIPGVPMFPIAEVDMLPAIAQGAIGIERRIDDATTQEMLAAIHDHDTGLRLAAERAFLA 246
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDGSC++ IAG A G+TL+ G +L DG I H +G + +GR A +
Sbjct: 247 RLDGSCETPIAGLAELDGATLHLRGEILRPDGSISHAGEISGAATEGAALGRTLADDLLS 306
Query: 299 ISNKNVFNF 307
+ + F++
Sbjct: 307 RAGEGFFDW 315
>gi|269103733|ref|ZP_06156430.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163631|gb|EEZ42127.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 294
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 162/290 (55%), Gaps = 2/290 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L H P + ++P+ TKGD I + L ++GGKGLF +E+E ++ G
Sbjct: 1 MWQAEFVKAELEKAH--PGLVVELVPMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P + +GL + RED RD F+S+ SL++L S++GTSSLRR+
Sbjct: 59 ADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNRYNSLEELPQGSIVGTSSLRRQC 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L R D+ V D RG + TRL KL++ + AI+LA AG+KRLK + I+ + E P
Sbjct: 119 QLRSQRPDLIVKDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRAAIAPETSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE +++ + ++L+ +NH++T V CERA L G C+ I +A +G
Sbjct: 179 AVGQGAVGIECRLDDTRVRDLLAALNHQETATRVLCERAMNNRLQGGCQVPIGSYAELQG 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
++ +V DG +G+ DA +G A+ + K +
Sbjct: 239 DQIWLRALVGEPDGSQIVRGEISGSANDAEALGTQLAEQLLADGAKPILE 288
>gi|153004241|ref|YP_001378566.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5]
gi|152027814|gb|ABS25582.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5]
Length = 313
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 150/300 (50%), Gaps = 3/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L K P + + L TKGDRI L E+GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVADLLRA--KEPGLEVRLHELVTKGDRILEVPLAEVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P +L GL I A RED RD S ++L L +
Sbjct: 60 KEIEDALLASDAEIAVHSMKDLPAELAPGLAIGAVPEREDPRDALCSPRYKTLAGLPRGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 KVGTSSLRRGAQLKALRPDLQLEMVRGNVETRLRKA-SEALDAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E + + + H +T + ER FL ++G C+
Sbjct: 179 TYVFPAEEMLPAVAQGALALEARAADAPTMARLAALEHPETRVRIEAERGFLGRIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAG A +G + +V + DG R+G DA +G A+ + +
Sbjct: 239 VPIAGHATVQGGRVSMRALVASLDGTRVIRGERSGPAADARQLGIALAEELLSKGAAEIL 298
>gi|260888475|ref|ZP_05899738.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185]
gi|330838215|ref|YP_004412795.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185]
gi|260861672|gb|EEX76172.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185]
gi|329745979|gb|AEB99335.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185]
Length = 311
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 173/305 (56%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K IGTR S LAL A + L + + P ++V ++TKGDR+ + L +IGG
Sbjct: 1 MKKDTIVIGTRSSKLALWQADYVEAKLRERY--PELHVVQKRMTTKGDRVLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++GEID AVHS KDMPT+L +GL ++A R D D +S Q+L +
Sbjct: 59 KGLFTKELEQAMLAGEIDLAVHSLKDMPTELPEGLMLAAVTERFDPGDAVVSPRYQTLAN 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A LL R D+ ++ RG + TRL KL AI+LA AG+KRL
Sbjct: 119 LPQGAKVGTSSLRRRAQLLAKRPDLEIVSLRGNVNTRLKKLEEENFDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I EIL E P+ GQGA+ IE ++ L+ ++ T + ERAFLA +
Sbjct: 179 FHDRITEILPREICLPAVGQGALAIEARADDEATLSLIAFLDDAATRAAARAERAFLARV 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ + +A L ++ + DG+ + + G+ DA IGR A+ + +
Sbjct: 239 EGGCQVPVGVYAEAADEALEMEAVIASIDGERLYRKKKAGSALDAEKIGRALAEELLAMG 298
Query: 301 NKNVF 305
K +
Sbjct: 299 GKEIL 303
>gi|162219161|ref|YP_747258.2| porphobilinogen deaminase [Nitrosomonas eutropha C91]
Length = 308
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 165/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IG
Sbjct: 1 MSSPEKIVIASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L G D AVHS KD+P + G +++A RED RD F+S+ SL+
Sbjct: 59 GKGLFIKELELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 119 ELPTGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++ E P+ GQGA+ IE N+P E +K ++H T V ERA
Sbjct: 179 ELGYRISMLIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRV 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ + GFA L G V DG G +G AQ ++
Sbjct: 239 LGGSCQVPLGGFAEIFEGVLTLRGFVATPDGSKIIADKLCGKPESGERVGEQLAQNLKTH 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAEEIL 304
>gi|313673928|ref|YP_004052039.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312940684|gb|ADR19876.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 308
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 157/306 (51%), Gaps = 4/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A +S L ++ P + + + T+GD I + L +IGG
Sbjct: 1 MEK--ITIATRGSKLALWQANHIKSLLT--NRYPEMLVELKIIKTQGDIILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE LI E D AVHS KD+P +L L+I RE D F+S +L +
Sbjct: 57 KGLFVKEIENALIENEADLAVHSMKDVPVELPDELEIYVNPHRESPFDAFLSVKYNNLDE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRRK + R R DI + D RG ++TR+ KL AI+LA AG+ RL
Sbjct: 117 LPRGAKLGTSSLRRKVQISRIRPDIEITDLRGNVDTRIRKLTEGTFDAIILARAGLNRLN 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ K + + PS QG + IE ++ + + ++K + E T ERAFL L
Sbjct: 177 LLEWAKYTFDDSEIVPSVCQGTLGIEVRKDDDRIKNILKFMKDEKTEIVTRAERAFLRRL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ I G+ +G L G + + DG F + G+ +G A+ I
Sbjct: 237 EGGCQAPIGGYCKIEGGKLKMIGFLSSLDGDEFLKYEEYGDMDKPEVLGESVAEKILING 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 GKKILD 302
>gi|22299189|ref|NP_682436.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1]
gi|39931549|sp|Q8DIE4|HEM3_THEEB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|22295371|dbj|BAC09198.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1]
Length = 320
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 156/308 (50%), Gaps = 5/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+P RIG+R S LAL ++ L H+ ++ ++T+GD I + L +IG K
Sbjct: 5 SSRPVRIGSRKSQLALVQTEWVQAQLQTHHR--DRAFEVVTMTTQGDNILDVALAKIGDK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E ++ GE D AVHS KD+PT+L GL ++A RED D + + +
Sbjct: 63 GLFTKELELSMLRGETDLAVHSLKDLPTQLPDGLVLAAITEREDPADALVLGAKWTGHTI 122
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++R
Sbjct: 123 DTLPEGTVIGTSSLRRLAQLRHYYPHLTFKDVRGNLNTRLAKLDAGEYDALILAVAGLRR 182
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I ++L + GQGA+ IE + LVK + H +T ERAFL
Sbjct: 183 LGFGDRISQVLPATVSLYAVGQGALGIECRAEDADILALVKTLEHPETTARCLAERAFLR 242
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ I + L G+V + DG+ + S G+ A +G A +R
Sbjct: 243 QLEGGCQVPIGVHTVIENGQLTLTGLVASLDGQRLVKDSLTGDVATAEELGTRLALKLRE 302
Query: 299 ISNKNVFN 306
+
Sbjct: 303 QGASEILE 310
>gi|90421073|ref|ZP_01228976.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1]
gi|90334708|gb|EAS48485.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1]
Length = 311
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 141/307 (45%), Positives = 190/307 (61%), Gaps = 1/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LA A A E R+ LM H +P I +ST GDRI +R L+E+GG
Sbjct: 1 MASDIIRIGTRGSQLAKAQASEVRARLMAAHDLPEEAFEIEVISTTGDRILDRPLSEVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE LI G +D A HS+KDM T +GL++SAYLPRED+RD FI TA ++ +
Sbjct: 61 KGLFTKEIEAALIDGRVDIAAHSSKDMATASPEGLEVSAYLPREDVRDAFIGRTAATIDE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IG++SLRR++LL R R D+ VI FRG +++RL KL + A LLA AG+ R+
Sbjct: 121 LPHGATIGSASLRRQSLLKRMRPDLKVITFRGNVQSRLRKLEEGQVDATLLALAGLNRMA 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V EIL +E F P+PGQGAICI+ + + + LV I T ++ ERAFLAEL
Sbjct: 181 MQDVATEILEVERFLPAPGQGAICIQNRIGDERVHGLVAAIADPRTTVALTAERAFLAEL 240
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DGSC++ IA A + T+ +G++L DG HE R G DA +GR A + +
Sbjct: 241 DGSCRTPIAAHAVLAEDGTVTLHGMILTPDGSRMHETRRTGIAADAEALGRLAGRDVLDA 300
Query: 300 SNKNVFN 306
+ F+
Sbjct: 301 AGPGFFD 307
>gi|113460193|ref|YP_718250.1| porphobilinogen deaminase [Haemophilus somnus 129PT]
gi|170718229|ref|YP_001785251.1| porphobilinogen deaminase [Haemophilus somnus 2336]
gi|123131907|sp|Q0I178|HEM3_HAES1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058918|sp|B0UWZ8|HEM3_HAES2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112822236|gb|ABI24325.1| hydroxymethylbilane synthase (porphobilinogen deaminase, PGB)
[Haemophilus somnus 129PT]
gi|168826358|gb|ACA31729.1| porphobilinogen deaminase [Haemophilus somnus 2336]
Length = 321
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 110/317 (34%), Positives = 165/317 (52%), Gaps = 14/317 (4%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K +I TR SPLAL A ++ L + ++ ++P+ TKGD I + L +IG
Sbjct: 1 MSINKTLKIATRQSPLALWQANYVKNRLQQRYS--HLSVELVPIITKGDVILDTPLAKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L++GE D AVHS KD+P + KGL++S PRED RD F+S+ ++L
Sbjct: 59 GKGLFVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++GTSSLRR+ L WR+D+ + RG + TRLNKL+ AI+LA AG+ RL
Sbjct: 119 ELPQGAIVGTSSLRRQCQLKNWRADLDIRSLRGNVGTRLNKLDQGDYDAIILASAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I+ + I+ P+ GQGA+ IE V++ Q L+ + + T V ERA
Sbjct: 179 GLTERIRSFIEIDTILPACGQGAVGIECRVDDRDVQSLLMPLADQTTTYCVLAERAMNFH 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-----------RNGNRCDAINI 288
L G C+ I +A + + LY G+V G A +
Sbjct: 239 LQGGCQVPIGAYAILENNQLYLRGLVGDVHGSQILSAEGQFELSLDFESSQSAVQKAEEL 298
Query: 289 GRDAAQYIRFISNKNVF 305
G A+ + +
Sbjct: 299 GVSIAEQLLQQGADKIL 315
>gi|91200437|emb|CAJ73484.1| strongly similar to hydroxymethylbilane synthase (porphobilinogen
deaminase) [Candidatus Kuenenia stuttgartiensis]
Length = 319
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
KP +G+R S LAL S L ++ P I +ST GD+IT+ L+ +GG G+
Sbjct: 8 KPIIVGSRGSKLALTQTNWVISELKKLN--PGVEFEIKKISTSGDKITDVPLSRLGGVGV 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E LI +ID AVHSAKD+PT++ + L + A R D DV IS +L+ L
Sbjct: 66 FTKELEVALIKEKIDLAVHSAKDIPTEVSEKLTLGAMPKRVDPSDVLISAKNVTLERLPG 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGTSSLRRKA LL R D ++D RG ++TRL KL + I++A+AG+ R+
Sbjct: 126 NARIGTSSLRRKAQLLALRPDFEIVDLRGNLDTRLKKLEADDLDGIIVAHAGLIRIGYTG 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EI+ E P+ GQG++ IE ++ + +++ ++ T +V ERA LA+L G
Sbjct: 186 QISEIIPFEIMLPAVGQGSLGIEIRKDDERINKILSKMDDLHTRIAVEAERALLAKLQGG 245
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A ++ ++ DG+ S G A +G + AQ +
Sbjct: 246 CQVPIGAHAKVLNDEVHLEAVICTLDGERTIRDSHKGPANQAAAVGNELAQRMLDNGGDK 305
Query: 304 VF 305
+
Sbjct: 306 IL 307
>gi|37522781|ref|NP_926158.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421]
gi|55976479|sp|Q7NGF7|HEM3_GLOVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|35213783|dbj|BAC91153.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421]
Length = 328
Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 107/311 (34%), Positives = 154/311 (49%), Gaps = 8/311 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG+R S LAL R L H P I+ + T+GD+I + L +IG
Sbjct: 1 MS-RTVIIGSRDSQLALVQTHWVRDELQRAH--PDIRFEIVEMKTQGDKILDVALAKIGD 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+E+E ++ D AVHS KD+PT L GL + A RED D I
Sbjct: 58 KGLFTKELESAMLEKRTDLAVHSLKDLPTALPPGLILGAITEREDPSDAVIVRRGLEAAG 117
Query: 118 LKDLALHSVIGTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L DL +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+
Sbjct: 118 LADLPEGAVVGTSSLRRLAQLKHHYGERLRFQDIRGNLNTRLRKLDEGRYDAIVLAVAGM 177
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+RL + I E+L+ + + GQGA+ IE + + +L+ V+NH T ERA
Sbjct: 178 RRLGWSERISEVLSPDISLHAVGQGALGIECREADGEILDLLTVLNHPPTARRCRAERAM 237
Query: 237 LAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L L+G C+ I + L GIV + DG+ R+G +GR A+
Sbjct: 238 LRALEGGCQVPIGVYTELDDSGRLTLQGIVASLDGRNMARACRSGPGDAPEALGRAVAED 297
Query: 296 IRFISNKNVFN 306
++ + + +
Sbjct: 298 LKAAGAQAILD 308
>gi|126740632|ref|ZP_01756319.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6]
gi|126718433|gb|EBA15148.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6]
Length = 319
Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 131/307 (42%), Positives = 180/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG
Sbjct: 11 PLKIGTRGSPLALAQAYETRARLAKAFDLPQEAFEIVVIKTTGDNQALIAADKPLKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D
Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVLQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KL + A LA AG+ RL
Sbjct: 131 LAAGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLEDGVAECTFLAMAGLNRLA 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V + D P+ QGAI IE ++ + +++ I+ + T + ERAFLA L
Sbjct: 191 MESVPATAIETTDMLPAVAQGAIGIERRSDDSRVAAMLEAIHDKATGQRLAAERAFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G TL G VL DG ++ D +GRD A + +
Sbjct: 251 DGSCETPIAGLAELDGGTLRMRGEVLRPDGSEAIAEDQSCAIEDGAALGRDMAAKLLDQA 310
Query: 301 NKNVFNF 307
+ F++
Sbjct: 311 GPSFFDW 317
>gi|123968087|ref|YP_001008945.1| porphobilinogen deaminase [Prochlorococcus marinus str. AS9601]
gi|158513952|sp|A2BPX7|HEM3_PROMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123198197|gb|ABM69838.1| Porphobilinogen deaminase [Prochlorococcus marinus str. AS9601]
Length = 316
Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 100/308 (32%), Positives = 160/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLEK--NIPNLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L++L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LENLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPSEVSLHAVGQGALGIECKSDDKKVLEIISILEDKPTCQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + L G+V + DG+ + G+ D +G++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSKIQNEQLCLTGMVASLDGERLIKDQYIGDINDPEEVGKELAKKLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 QQGAEEIL 306
>gi|167630035|ref|YP_001680534.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1]
gi|167592775|gb|ABZ84523.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1]
Length = 315
Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 162/307 (52%), Gaps = 4/307 (1%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M ++P IGTR S LAL L +++ P + + TKGD+I + L +I
Sbjct: 1 MSALQRPVVIGTRDSALALWQTHWVLERLKELY--PEQAFEVKHIKTKGDKILDVALAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G KGLFT+E+E +++GEID AVHS KD+PT L +G I A RED RD+ IS L
Sbjct: 59 GDKGLFTKELEVAMLNGEIDMAVHSMKDLPTLLPEGCAIGAICVREDCRDILISRNGGGL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
++L + +GT+SLRRKA + + R D+ ++D RG ++TR+ K+ ++LA AG+KR
Sbjct: 119 EELPRGAKVGTASLRRKAQIWKVRPDLELVDIRGNLQTRMRKMEEQNLDGLILAAAGVKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I E + ++ P+ GQG++ IE + LV +NH ++ V ERA L
Sbjct: 179 LGWAEKITEYIPVDMCLPAVGQGSVGIEIREGDEAIGRLVAALNHAESALCVRAERALLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I G L G+V + DG+ G+ D G A+ +
Sbjct: 239 TLEGGCQVPIGSLGRLSGGKLIVDGVVASLDGRTICRDRVEGDPADPEEAGVRLAKKLLQ 298
Query: 299 ISNKNVF 305
+ +
Sbjct: 299 QGAREIL 305
>gi|172039291|ref|YP_001805792.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142]
gi|171700745|gb|ACB53726.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142]
Length = 331
Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 18 STRTIRIGSRKSQLALVQTYWIQEELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 75
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E ++ ++D AVHS KD+PT L +GL + R + D + +H + L
Sbjct: 76 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVNETHQDKQL 135
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++R
Sbjct: 136 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQR 195
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ + + GQGA+ IE +P+ +L+KV+ H +T D ERAFL
Sbjct: 196 LDMSDRIHQVIPDDISLHAVGQGALGIECRSGDPEILDLLKVLEHTETRDRCYAERAFLR 255
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ I + + L G+V + DGK + + G A +G + A +R
Sbjct: 256 QLEGGCQVPIGVNTKIENNILTLTGMVASLDGKTLIKDTIQGEAAQAEKLGEELALRLRD 315
Query: 299 ISNKNVF 305
+
Sbjct: 316 EGATEIL 322
>gi|320354663|ref|YP_004196002.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032]
gi|320123165|gb|ADW18711.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032]
Length = 319
Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 112/301 (37%), Positives = 172/301 (57%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ + ++ + H P + ++ ++TKGDRI + L ++GGKGLF
Sbjct: 5 LRIGTRASLLAVTQSTWVKTQIEQAH--PGTRVELVKITTKGDRILDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++GE+D AVHS KD+PT+L +GL I RE D F+S T +L DL +
Sbjct: 63 KEIEDALLAGEVDLAVHSMKDVPTELPEGLHIGVIPVRETPYDAFLSKTCTTLADLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRRK+ L+ R D+ ++D RG I+TRL KL+ AI+LA AG++RL E I
Sbjct: 123 TIGTSSLRRKSQLMALRPDLDIVDLRGNIDTRLRKLDEGVYDAIILAGAGLRRLHLEHRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L P+ QGA+ IE ++ + + ++ ++H +T +V ERAFL L+G C+
Sbjct: 183 TALLEPTQMLPAISQGALGIELRQDDTELADGLRFLHHGETAVAVEAERAFLLRLEGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA A ++ G++ + DG+ + + G A +G AQ + K +
Sbjct: 243 VPIAAHATLDSGSVTLTGLIASVDGRQILKEATTGPAEQAARLGAQLAQTLLDRGGKAIL 302
Query: 306 N 306
+
Sbjct: 303 D 303
>gi|326561756|gb|EGE12091.1| porphobilinogen deaminase [Moraxella catarrhalis 7169]
Length = 321
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|326571836|gb|EGE21842.1| porphobilinogen deaminase [Moraxella catarrhalis BC7]
Length = 321
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 108/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + A++LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAVILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|296112247|ref|YP_003626185.1| porphobilinogen deaminase [Moraxella catarrhalis RH4]
gi|295919941|gb|ADG60292.1| porphobilinogen deaminase [Moraxella catarrhalis RH4]
Length = 321
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|326569020|gb|EGE19089.1| porphobilinogen deaminase [Moraxella catarrhalis BC1]
Length = 321
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|326560715|gb|EGE11083.1| porphobilinogen deaminase [Moraxella catarrhalis 46P47B1]
Length = 321
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|303229236|ref|ZP_07316032.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a]
gi|302516091|gb|EFL58037.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a]
Length = 312
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIGTR S LAL + +S L ++ P + ++ +TKGDRI ++ L E+GGK
Sbjct: 1 MRNHIRIGTRKSALALWQSEYVKSELQRLY--PGITVELVHFNTKGDRILDKPLAEVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L
Sbjct: 59 GLFTAELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL
Sbjct: 119 PEGARIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+
Sbjct: 179 DDRITQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLN 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ + + + L ++ + DGK +E +G + +G++ A+ +
Sbjct: 239 GGCQVPMGVYGTVEKGQLILKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGG 298
Query: 302 KNVFN 306
K++
Sbjct: 299 KHIVE 303
>gi|326574375|gb|EGE24318.1| porphobilinogen deaminase [Moraxella catarrhalis CO72]
gi|326575506|gb|EGE25431.1| porphobilinogen deaminase [Moraxella catarrhalis 101P30B1]
Length = 321
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|326562302|gb|EGE12628.1| porphobilinogen deaminase [Moraxella catarrhalis 103P14B1]
gi|326563079|gb|EGE13352.1| porphobilinogen deaminase [Moraxella catarrhalis 12P80B1]
gi|326571711|gb|EGE21724.1| porphobilinogen deaminase [Moraxella catarrhalis BC8]
gi|326578075|gb|EGE27935.1| porphobilinogen deaminase [Moraxella catarrhalis O35E]
Length = 321
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG
Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D
Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL
Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L
Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292
+G C+ IAGFA + L G V + DGK + + A +G D
Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298
Query: 293 AQYIRFISNKNVF 305
A + ++
Sbjct: 299 AHELLMQGADDIL 311
>gi|303230554|ref|ZP_07317308.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6]
gi|302514795|gb|EFL56783.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6]
Length = 312
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIGTR S LAL + +S L ++ P + ++ +TKGDRI N+ L E+GGK
Sbjct: 1 MRNHIRIGTRKSALALWQSEYVKSELQRLY--PGVTVELVHFNTKGDRILNKPLAEVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L
Sbjct: 59 GLFTAELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL
Sbjct: 119 PEGARIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+
Sbjct: 179 DDRITQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLN 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ + + + L ++ + DGK +E +G + +G++ A+ +
Sbjct: 239 GGCQVPMGVYGTVEKGQLNLKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGG 298
Query: 302 KNVFN 306
K++
Sbjct: 299 KHIVE 303
>gi|239905446|ref|YP_002952185.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1]
gi|239795310|dbj|BAH74299.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1]
Length = 311
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ I TR S LAL A L H P + ++P+ TKGD I + L ++GGK
Sbjct: 1 MREKLVIATRGSKLALWQANHVADRLRQTH--PGLAVDLLPIKTKGDIILDVPLAKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+ G D AVHS KD+P + GL + RED D +S SL L
Sbjct: 59 GLFVKEIEEALLDGRADLAVHSMKDVPAEQPAGLVVGIVPEREDPCDRLLSVAYDSLAAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRRKA LL R D++++D RG ++TR+ KL + + AI++A AG+ RL+
Sbjct: 119 PQGATVGTSSLRRKAQLLALRPDLAIVDLRGNLDTRVKKLLDGQFDAIIVAAAGLNRLEL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
L +F P+ QGA+ IE +++P+ ++ +H ++ D+V ER FL L+
Sbjct: 179 SAPKAVRLGPPEFLPAAAQGALGIEYRLDDPETAAMLAFFDHPESHDAVAAERGFLGHLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IA A G ++ G+V + + +G R A +G A+ +
Sbjct: 239 GGCQVPIAAHAVIDGDMIHLEGLVADPETGQTFREAASGPRSQATALGVAVAEAVLARGA 298
Query: 302 KNVFN 306
K V +
Sbjct: 299 KAVLD 303
>gi|71909286|ref|YP_286873.1| porphobilinogen deaminase [Dechloromonas aromatica RCB]
gi|123733070|sp|Q479S8|HEM3_DECAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71848907|gb|AAZ48403.1| Porphobilinogen deaminase [Dechloromonas aromatica RCB]
Length = 311
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 109/307 (35%), Positives = 162/307 (52%), Gaps = 3/307 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I +R S LA+ A R L ++ P +VI+ ++TKGD+I +R L EIG
Sbjct: 1 MSRPSKIVIASRESRLAMWQAVHVRDRLSSLN--PGAEVVILGMTTKGDQILDRPLAEIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E + G+ AVHS KD+P + +G ++A RE+ RD F+S+ L
Sbjct: 59 GKGLFIKELEVAMQEGKAHLAVHSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLD 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +++GTSSLRR+++L + + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 119 DLPAGAIVGTSSLRRESILRAKYPQLVIKSLRGNLDTRLKKLDAGEYDAIILAAAGLIRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E IK +L E P+PGQGA+ IE ++V +N +T V ERAF
Sbjct: 179 GMENRIKSVLTAEQSLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRA 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ + G+A L+ G V +DG+ GN D +G A +R
Sbjct: 239 LGGSCQVPLGGYAIIDNGQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELRAK 298
Query: 300 SNKNVFN 306
+
Sbjct: 299 GADAILE 305
>gi|21328661|gb|AAM48667.1| porphobilinogen deaminase [uncultured marine proteobacterium]
Length = 316
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 134/305 (43%), Positives = 187/305 (61%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K P IGTR SPLALA A+ETR+ L +P I+ + T GDR+T+R L EIGGKG
Sbjct: 9 KTPLNIGTRGSPLALAQAYETRARLAKAFDLPFEAFEIVVIMTTGDRVTDRPLKEIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ ++ G ID AVHS KDMP GL + YLPRED+RD FIS + +L DL+
Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPVLQPDGLVLDTYLPREDVRDAFISLSGGALSDLS 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+A L R D+ V++FRG ++TRL KL N A A LA AG+KRL +
Sbjct: 129 PGAVVGTSSLRRQAQLKLRRPDLQVVEFRGNLQTRLKKLENQVAEATFLAMAGLKRLNMD 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+V ++ + ++D P+ QGAI IE +N+ + +++ I+ +T + ERAFLA LDG
Sbjct: 189 EVPRQAIEVDDMLPAVAQGAIGIERRINDGRMADMLAAIHDRETGQRLAAERAFLAALDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG + +GST+ G VL DG D G++ A + + +
Sbjct: 249 SCETPIAGLSELQGSTMRLRGEVLRPDGSDAIHDDMVVPIEDGAQAGKEMAAKLLEQAGR 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|301062020|ref|ZP_07202731.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2]
gi|300443871|gb|EFK07925.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2]
Length = 316
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 115/300 (38%), Positives = 170/300 (56%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL + + L H ++ +I + T GD+I + L++IGGKGLF
Sbjct: 3 IRIGTRGSKLALTQSEWIKEQLEIRHS--GIHVDLIKIKTTGDKILDTPLSKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHS KD+P +L + L +S + PRED D I+ + L L +
Sbjct: 61 KEIEEALLQNRIDVAVHSMKDVPAELPEALMLSTFPPREDPSDALIAQENRRLDQLPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A LL R D++++ RG ++TRL KL + + A++LA AG+ RL VI
Sbjct: 121 RVGTSSLRRGAQLLHLRPDLTLVPLRGNVDTRLGKLKSGEVEAVILATAGLNRLGLSGVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ +E ++ + + +NH+DT +V ER FL L+G C+
Sbjct: 181 TQRIPFHQLLPAVGQGALGLEVRRDDRETIRRLDFLNHDDTRTAVTAERGFLKTLEGGCQ 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAGFA G L F G+V DG ++ G+R DA IG +AA+ + +V
Sbjct: 241 VPIAGFAQIVGDNLSFEGLVAELDGSRIYKEIATGSRDDAEKIGIEAAKTLLSSGAGDVL 300
>gi|33866317|ref|NP_897876.1| porphobilinogen deaminase [Synechococcus sp. WH 8102]
gi|39931373|sp|Q7U5C2|HEM3_SYNPX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33639292|emb|CAE08300.1| Porphobilinogen deaminase [Synechococcus sp. WH 8102]
Length = 317
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNANHK 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +V+GTSSLRR A L +S D RG + TRL KL++ ++LA AG++
Sbjct: 119 LDTLPEGAVVGTSSLRRLAQLRHHYPHLSFKDVRGNVITRLEKLDSGDYDCLILAAAGLE 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + + GQGA+ IE + P+ E++KV+ H T ERAFL
Sbjct: 179 RLGFGNRIHQIIPGDISLHAVGQGALGIECVEDKPEVLEIIKVLEHTTTSRRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK +G+ D +IG + A ++
Sbjct: 239 RELEGGCQVPIGVNSQINNEELTLTGMVASLDGKRLIRDEASGSAADPESIGIELAGKLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 HQGAGAIL 306
>gi|114308050|gb|ABI59293.1| hydroxymethylbilane synthase [Nitrosomonas eutropha C91]
Length = 334
Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 165/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IG
Sbjct: 27 MSSPEKIVIASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIG 84
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L G D AVHS KD+P + G +++A RED RD F+S+ SL+
Sbjct: 85 GKGLFIKELELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLE 144
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 145 ELPTGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRL 204
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++ E P+ GQGA+ IE N+P E +K ++H T V ERA
Sbjct: 205 ELGYRISMLIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRV 264
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ + GFA L G V DG G +G AQ ++
Sbjct: 265 LGGSCQVPLGGFAEIFEGVLTLRGFVATPDGSKIIADKLCGKPESGERVGEQLAQNLKTH 324
Query: 300 SNKNVF 305
+ +
Sbjct: 325 GAEEIL 330
>gi|116075276|ref|ZP_01472536.1| porphobilinogen deaminase [Synechococcus sp. RS9916]
gi|116067473|gb|EAU73227.1| porphobilinogen deaminase [Synechococcus sp. RS9916]
Length = 316
Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats.
Identities = 106/308 (34%), Positives = 156/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEQLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALAVNAKNAQYK 118
Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LDTLPAGSVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ E + GQGA+ IE +P+ EL+KV+ H T ER+FL
Sbjct: 179 RLGFGDRIHQIIPSEISLHAVGQGALGIECVEGSPEVLELIKVLEHAPTAARCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I G TL G+V + DGK +G DA IG+ A ++
Sbjct: 239 RELEGGCQVPIGVNTVIDGDTLTLTGMVASLDGKRLIRDQASGTTADAEAIGKQLADTLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 GQGAGEIL 306
>gi|124025263|ref|YP_001014379.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A]
gi|158512743|sp|A2C0V4|HEM3_PROM1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123960331|gb|ABM75114.1| Porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A]
Length = 315
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 102/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQRAH--PDLAITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPEGLILGCITEREDPSDALVVNEKNQIHK 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE K +++K + HE T ER+FL
Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK + G+ A IG D A ++
Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 GRGAGEILE 307
>gi|225848376|ref|YP_002728539.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644642|gb|ACN99692.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 308
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 178/304 (58%), Gaps = 6/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A + + +H + ++ ++T GD+I + L +IGGKGLF
Sbjct: 2 KVRIGTRKSQLALWQANYIANLINQIH---GVEVELVKITTSGDKILDVPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE ++ GEID AVHS KD+PT+L +GL I A RED RD F+S +SLKDL
Sbjct: 59 VKEIEDAMLKGEIDIAVHSLKDVPTQLPEGLDIIAITEREDPRDAFLSTKYKSLKDLPAG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL +
Sbjct: 119 AVVGTSSLRRKSQIMKMRDDLIINDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ P+ QG + IE V++ + +++++ IN+++++ ER+FL L+G C
Sbjct: 179 ASYIFSPQEMIPAVCQGFLGIEARVDDERIKKILEPINNQESFIRATAERSFLKTLEGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ + + K ++ G + +GK F + S + N A +G+ A +
Sbjct: 239 QVPLGAYCEIKDDFIHITGFIADLEGKTFIKESLSEKLTNINQAKELGQRLANILLKRGG 298
Query: 302 KNVF 305
K++
Sbjct: 299 KDIL 302
>gi|161594062|ref|NP_899724.2| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472]
gi|55976482|sp|Q7P207|HEM3_CHRVO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 166/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF
Sbjct: 3 KIVIASRESRLAMWQAEHIQARLQALY--PHLTVEILGMTTQGDQILDKTLSKIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L+ G D AVHS KD+P L G ++A RED RD F+S+ Q L +L
Sbjct: 61 VKELEQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A L ++V RG ++TRL KL++ + AI+LA AG+KRL +
Sbjct: 121 SVVGTSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAER 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L + P+ GQGA+ IE + L+ +NH DT ERA EL GSC
Sbjct: 181 IQGELAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + FA TL G+V DG + S +G A +GR A+ + + +
Sbjct: 241 QVPLGAFATLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGARPL 300
Query: 305 F 305
Sbjct: 301 I 301
>gi|323451650|gb|EGB07526.1| hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens]
Length = 333
Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats.
Identities = 131/306 (42%), Positives = 187/306 (61%), Gaps = 3/306 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIP---PHNIVIIPLSTKGDRITNRTLTEIGGK 61
P RIGTR SPLALA A+ TR LM I + + T+GD I ++ L+EIGGK
Sbjct: 19 PLRIGTRGSPLALAQAYMTRELLMKNFPEELGGEGAIQLCIMKTQGDMILDKALSEIGGK 78
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E++ L+ E+D VHS KD+PT L + L RED RDVFIS TA+SLKDL
Sbjct: 79 GLFTKELDVALLGDEVDICVHSMKDVPTWLPAKTVLPCMLEREDTRDVFISPTAKSLKDL 138
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIG++SLRR++ +L + ++FRG ++TRL KL+ A LLAYAG+KR+
Sbjct: 139 KDGSVIGSASLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAGLKRMDM 198
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +L ++ P+ QGAI I+ ++ +A + + +NHE+T+ V+CERAFLA LD
Sbjct: 199 ADEVTAVLEWDEMLPAVAQGAIGIQCRDDDARALKYIAALNHEETFTCVSCERAFLAALD 258
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G+CK+ IAG A L F G+V + DG+ + ++ G DA IGR+A + I+ +
Sbjct: 259 GNCKTPIAGQARIVDGELLFDGLVSSLDGQQMYRATKTGAPADAEKIGREAGEGIKAEAG 318
Query: 302 KNVFNF 307
F +
Sbjct: 319 IEFFEW 324
>gi|258514534|ref|YP_003190756.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771]
gi|257778239|gb|ACV62133.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771]
Length = 309
Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 164/303 (54%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +GTR S LAL A L + + P ++ I + T GD I + L +IG KG
Sbjct: 1 MREIVVGTRDSQLALWQANWVVDRLRERN--PGYSFRIQGIKTHGDNILDVALAKIGDKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E L+S EID AVHS KD+PT L GL + A RE DV +S L L
Sbjct: 59 LFTKELEVALLSDEIDLAVHSMKDLPTDLPGGLAVGAVCEREYPGDVLVSSQGYVLDKLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL +R D+ +++ RG + TRL K++ K ++LAYAGI+RL +
Sbjct: 119 EGAVIGTSSLRRTAQLLHYRQDLRIVNIRGNLNTRLRKMDEEKLDGVVLAYAGIQRLGLK 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E + +E P+ GQG+I IE + + ++V+ I H + +V+ ER FL L+G
Sbjct: 179 DRITERIPMEICLPAVGQGSIGIEIRHLDEEIMDIVETIEHRPSRIAVSAERNFLKRLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + G+ + F G++ + DGK G +A IG A+ + +
Sbjct: 239 GCQVPIGAYGLVIGNEIKFEGLIASLDGKHLVRDVIAGPVNEAAKIGVKLAESLLKKGGR 298
Query: 303 NVF 305
+
Sbjct: 299 EIL 301
>gi|323701815|ref|ZP_08113485.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574]
gi|323533119|gb|EGB22988.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574]
Length = 309
Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ ++G+R S LAL + L + P + I+ + TKGD++ + L +IG K
Sbjct: 1 MKRKIKVGSRDSALALWQTRWVVAQLEQQN--PHLSFEIVTMKTKGDKMLDVALAKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E +++ EID AVHS KDMPT L GL I A R++ D IS + L +L
Sbjct: 59 GLFTKELELAMLNKEIDFAVHSLKDMPTALPAGLTIGAVCKRDNPGDALISKDGRKLAEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR A LL +R D + RG + TR+ K+ + + AI+LA AGI R+
Sbjct: 119 PQGARIGTSSLRRCAQLLNYRPDFRLEALRGNLNTRMKKMASQQLDAIILAAAGIYRMGW 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+I EI+ P+ GQGAI +E ++ + +L++ + H+ T + + ER+ L L+
Sbjct: 179 SDMIAEIIPFNVCLPAVGQGAIAVECREDDIEINQLLQGVEHQPTRVATDAERSLLRRLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + L IV DG+ G A +G + A + +
Sbjct: 239 GGCQVPIGAYGEVIEDRLSLQAIVATLDGQRLIRAQGEGALNQAEELGIEVADKLLSMGG 298
Query: 302 KNVF 305
K +
Sbjct: 299 KEIL 302
>gi|242278118|ref|YP_002990247.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638]
gi|259647794|sp|C6BYB7|HEM3_DESAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|242121012|gb|ACS78708.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638]
Length = 308
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ I TR S LAL A L + + P + ++ + TKGD+I + L ++GGKG
Sbjct: 1 MRKITIATRGSKLALWQANHISDLLREEY--PGIEVQLLKIKTKGDKILDVPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+PT+L +GL++ PRE D +S SLKDL
Sbjct: 59 LFVKEIEEALLDGRADLAVHSMKDVPTELPEGLEVGIIPPREAETDTLLSVKYDSLKDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR++ +L R D+ + RG ++TR+ KL N + AI++A AG+ RLK
Sbjct: 119 AGAVVGTSSLRRQSQVLALRDDLKIESLRGNLDTRVGKLLNGEFDAIVVATAGLNRLKLS 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
EIL F P+ QGA+ IE + + + Q+++ ++ E T V ER FL LDG
Sbjct: 179 APKSEILGPPTFLPAVAQGALGIEYRIEDTEIQDILAFLHDEMTARQVKAERGFLTGLDG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA ++ + + G V DG + + G DA +IG A+ + K
Sbjct: 239 GCQVPIAAWSQLESDQVKLTGFVADIDGSSPIRMEKTGPAEDAWDIGLALAEEVLAAGAK 298
Query: 303 NVFN 306
+ +
Sbjct: 299 EILD 302
>gi|88705502|ref|ZP_01103212.1| Porphobilinogen deaminase [Congregibacter litoralis KT71]
gi|88700015|gb|EAQ97124.1| Porphobilinogen deaminase [Congregibacter litoralis KT71]
Length = 308
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLAL A+ R +L++ H P + ++ ++++GD+I + L ++GGKGLF
Sbjct: 5 VVIATRESPLALWQAYFVRDTLLETH--PGITVELLGMTSRGDQILDVPLAKVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G AVHS KD+P + +GL+++ RE+ D F+S+ ++L L +
Sbjct: 63 KELETALLDGRAHIAVHSMKDVPMEFPEGLELAVICEREEPADAFVSNRYENLDALPAGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ L R D+ V RG + TRL KL+ + A++LA AG+ RL+ + I
Sbjct: 123 IVGTSSLRRECQLRANRPDLEVRFLRGNVNTRLRKLDEGEYDAVILACAGLIRLEMGERI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + D P+ GQGA+ IE ++ ++L++ ++H T + V ERA L G C+
Sbjct: 183 RARIPVTDSLPAGGQGAVGIEIRSDDSATRKLLEPLHHGPTAERVLAERALNRRLQGGCE 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA +A +G L+ G+V DG G+R + +G A + +
Sbjct: 243 VPIASYAVHEGDELWLRGLVGRPDGSHTLRADARGSREEPEALGIAVADSLLEAGAAEIL 302
>gi|148241995|ref|YP_001227152.1| porphobilinogen deaminase [Synechococcus sp. RCC307]
gi|158513324|sp|A5GSE0|HEM3_SYNR3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|147850305|emb|CAK27799.1| Porphobilinogen deaminase [Synechococcus sp. RCC307]
Length = 317
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 150/308 (48%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L + H P I I ++T+GD+I + L +IG
Sbjct: 1 MTASSLRIASRRSQLAMVQTEWVRDELANAH--PGLEISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-- 118
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H
Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVMHAKNKDLT 118
Query: 119 -KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVITRLEKLDSGQFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECRDGDAAVLEQIKVLEHRPTSLRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ I +G L G+V + DGK + A ++G A+ +R
Sbjct: 239 RTLEGGCQVPIGVNTRFEGDELVLTGMVASLDGKQLIRDELRAPQDQAEDLGNRLAELLR 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 SQGAGEIL 306
>gi|117924047|ref|YP_864664.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1]
gi|117607803|gb|ABK43258.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1]
Length = 314
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 169/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M RIGTR S LA+ A +S L H P + + + TKGD+I + L ++G
Sbjct: 1 MSDPQLVRIGTRGSALAVWQAEWVKSQLQAHH--PGIIVELELIKTKGDKILDVPLAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ ++ G +D AVHS KD+P + GL + L RED RD +S QSL
Sbjct: 59 GKGLFVKELEEAMLDGRVDLAVHSMKDVPAEFPDGLMLGPILKREDPRDALLSIHYQSLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L ++IG+SSLRR++ + R D+ + RG + TR+ KL + AI+LA AG+KRL
Sbjct: 119 ELPQGALIGSSSLRRQSQIKAKRPDLRLDWLRGNVGTRIQKLVEGQFDAIILAAAGVKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + L E+ P+ GQGA+ IE V++ + L+ + H++T V ERAFLA+
Sbjct: 179 GLTEHVVQYLEPEEMLPAVGQGAVGIEHRVDDARIATLLAPLYHKETHSCVTAERAFLAK 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ IAG+A TL G+V +G + G R DA +G+ A +
Sbjct: 239 LEGGCQVPIAGYATLHEDTLTLRGLVAEVEGGRVVQAQCQGPRADAYRMGQQLATQLLEA 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GGGAIL 304
>gi|308273123|emb|CBX29726.1| Porphobilinogen deaminase [uncultured Desulfobacterium sp.]
Length = 323
Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats.
Identities = 119/304 (39%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ IGTR S LAL A +S L+ K ++ + + TKGDRI + L ++GGKG
Sbjct: 17 KRKIIIGTRGSKLALWQAEWVKSYLVQ--KFTDLSVELKIIKTKGDRILDVALAKVGGKG 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L ID AVHS KDMP L GL I A RE+ RDV IS L L
Sbjct: 75 LFVKEIEQSLADSSIDIAVHSMKDMPADLHDGLCIGAIPERENPRDVLISGKGLLLSQLP 134
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A + R R D+ + RG ++TR+NKL + AI+LA AG+KRL E
Sbjct: 135 EGALVGTSSLRRIAQIKRIRPDLVIAPLRGNLDTRINKLEMGEIDAIILAAAGVKRLGLE 194
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
K+I E LN + P+ GQGA+CIE ++ + +NH T V ERAFL ++G
Sbjct: 195 KIITEYLNEDTMLPAVGQGALCIEIRKDDHDISGFINEMNHFVTRAVVLGERAFLKRIEG 254
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+ + G+V DGK ++ G+ + +IG A + + K
Sbjct: 255 GCQVPIAGYGKVENDIFIIRGLVADPDGKTIITDTQRGSLESSESIGAALADRLISMGAK 314
Query: 303 NVFN 306
+ +
Sbjct: 315 RLLD 318
>gi|255262067|ref|ZP_05341409.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
gi|255104402|gb|EET47076.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
Length = 326
Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats.
Identities = 134/303 (44%), Positives = 179/303 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR SPLALA A+ETR+ L +P I+ + T GDRI +R L EIGGKGLF
Sbjct: 23 PLNIGTRGSPLALAQAYETRARLSAAFDLPSEAFTIVVIKTTGDRIIDRPLKEIGGKGLF 82
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE ++ G+ID AVHS KDMP GL I YLPRED RD FI+ LKDLA
Sbjct: 83 TREIEDAMLQGDIDIAVHSMKDMPVLQPDGLLIDTYLPREDNRDAFIALDGSGLKDLAEG 142
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR A L+ R D+++++FRG ++TRL KL + A A LA AG+ RLK + V
Sbjct: 143 ATVGTSSLRRHAQLMNRRPDLNIVEFRGNLQTRLKKLGDGVAEATFLAMAGLNRLKMDDV 202
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + +D P+ QGAI IE ++ + E+++ I+ T + ERAFL LDGSC
Sbjct: 203 PRTAIETDDMLPAVAQGAIGIERRADDSRMAEMLEAIHDGPTGQRLAAERAFLKALDGSC 262
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ IAG A G LY G VL DG + +G D +GR A + + +
Sbjct: 263 ETPIAGLAELNGGILYLRGEVLRVDGSDTVYDAASGPIEDGAEMGRVMAAKLLAEAGEGF 322
Query: 305 FNF 307
F++
Sbjct: 323 FDW 325
>gi|288818572|ref|YP_003432920.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|288787972|dbj|BAI69719.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|308752163|gb|ADO45646.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
Length = 304
Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats.
Identities = 115/300 (38%), Positives = 174/300 (58%), Gaps = 6/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L + H + ++ ++T GD+I + L +IGGKGLF
Sbjct: 3 LRIGTRKSKLALWQANFVKEKLEKM----GHQVDLVHITTSGDKILDVPLAKIGGKGLFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ EID AVHS KD+P L +GL+I A RE+ DV IS L++L ++
Sbjct: 59 KEIEEALMKKEIDLAVHSLKDVPMNLPEGLKIGAVTERENPFDVLISKDHLPLEELPSNA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+ + R R D+ V RG ++TR+ KL+ HA++LAYAG+KR+ E I
Sbjct: 119 KVGTSSLRRQVQIKRRRGDLRVEMLRGNVDTRIRKLDEGLYHAVILAYAGVKRMGLEDRI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ +EDF P+ GQG++ IE ++ +E+V +H ++ CERAFL EL G C+
Sbjct: 179 TQV--LEDFIPAVGQGSLAIEIRQDDSAVEEIVSCFDHYESRLRAECERAFLRELQGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +++ +G T++ G V +G F E R+G +A IG+ A + +
Sbjct: 237 VPIGAYSWIEGDTIFIKGFVSDLEGIKFIEGMRSGEAKEAQQIGKSLAHDLLREGADQIL 296
>gi|254525987|ref|ZP_05138039.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202]
gi|221537411|gb|EEE39864.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202]
Length = 318
Score = 258 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 104/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLDVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPTGLKLGCITKREDPADALVVSKKNDCYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + LY G+V + DGK + GN + +G + A+ ++
Sbjct: 239 RELEGGCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLK 298
Query: 298 FISNKNVF 305
F +
Sbjct: 299 FQGADKIL 306
>gi|94969590|ref|YP_591638.1| porphobilinogen deaminase [Candidatus Koribacter versatilis
Ellin345]
gi|123256362|sp|Q1INI6|HEM3_ACIBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94551640|gb|ABF41564.1| hydroxymethylbilane synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 311
Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 169/302 (55%), Gaps = 6/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LAL A + L + H + + + T GD+I + L ++G KG+F
Sbjct: 3 TLRIGSRGSQLALWQANHISALLRER----GHEVELEIIKTTGDKILDVALAKVGTKGMF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE+ L +G++D AVHS KD+PT+L +G +++A RE+ RDVF+S S+ L
Sbjct: 59 TKEIEEALAAGKVDVAVHSLKDLPTELPQGFELAAVTKRENPRDVFLSVKYDSISGLPQG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A + R D+ + RG ++TR+ KL + AI+LA+AG+ RL K ++
Sbjct: 119 AKVGTSSLRRQAQIKAIRPDLEIFPLRGNVDTRVRKLEQGEYDAIILAFAGLNRLGKTQL 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+KEI++ + P+ GQGA+ IE + + + +E++ +N D + ERA L +L G C
Sbjct: 179 VKEIISEDVMCPAAGQGALGIEIRLGDTRMREILSFLNDYDARATTTAERALLNQLGGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I FA K ++ I DG S++G D ++G + + + +
Sbjct: 239 QVPIGAFAEVKDGQVHLTAICARPDGSEILRESKSG--ADPAHLGEEVGKTLLARGATKI 296
Query: 305 FN 306
Sbjct: 297 LE 298
>gi|86139102|ref|ZP_01057673.1| porphobilinogen deaminase [Roseobacter sp. MED193]
gi|85824333|gb|EAQ44537.1| porphobilinogen deaminase [Roseobacter sp. MED193]
Length = 319
Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats.
Identities = 129/307 (42%), Positives = 176/307 (57%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L + +P I+ + T GD ++ L E+GG
Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLAEAFDLPHEAFEIVVIKTSGDNQALIAADKPLKELGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D
Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KLN A LA AG+ RL
Sbjct: 131 LEPGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLNEGVAECTFLAMAGLNRLA 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + D P+ QGAI IE ++ + +++ I+ T + ERAFLA L
Sbjct: 191 MADVPATAIETNDMLPAVAQGAIGIERRGDDSRTAAMLEAIHDVTTGKRLAAERAFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G TL G VL DG ++ D +GR+ A + +
Sbjct: 251 DGSCETPIAGLAELDGGTLRLRGEVLRPDGSEALAEDQSCAIEDGGELGREMAAKLLATA 310
Query: 301 NKNVFNF 307
F++
Sbjct: 311 GPGFFDW 317
>gi|304388235|ref|ZP_07370355.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091]
gi|304337762|gb|EFM03911.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091]
Length = 311
Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|261393090|emb|CAX50687.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS;
pre-uroporphyrinogen synthase) [Neisseria meningitidis
8013]
Length = 311
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|325141763|gb|EGC64215.1| porphobilinogen deaminase [Neisseria meningitidis 961-5945]
gi|325197751|gb|ADY93207.1| porphobilinogen deaminase [Neisseria meningitidis G2136]
Length = 311
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|325133945|gb|EGC56601.1| porphobilinogen deaminase [Neisseria meningitidis M13399]
gi|325143900|gb|EGC66212.1| porphobilinogen deaminase [Neisseria meningitidis M01-240013]
gi|325206609|gb|ADZ02062.1| porphobilinogen deaminase [Neisseria meningitidis M04-240196]
Length = 311
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 102/305 (33%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ + P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESESLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|291288798|ref|YP_003505614.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809]
gi|290885958|gb|ADD69658.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809]
Length = 308
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 170/306 (55%), Gaps = 5/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A+ TR L H + + + TKGD+I + L +IGG
Sbjct: 1 MEK--VVIATRGSNLALWQAYYTRDRLQKEH---GVEVELNIIKTKGDKILDVPLAKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ LI G+ D AVHS KD+P ++ +GL++ A D F+S + +
Sbjct: 56 KGLFVKEIEQALIDGKADIAVHSMKDVPMEMPEGLELYASPEGASPYDCFVSVKYNEVVE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRRK LL+ R D+ + D RG + TRL KL + I+LA AG+ RL+
Sbjct: 116 LPQGAVVGTSSLRRKLQLLKMRPDLVIKDLRGNVNTRLAKLEAGEFDGIVLAKAGLVRLE 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
VIKE + P+ QGA+ + N+ + +EL++ + T V+ ERAFL L
Sbjct: 176 LGHVIKETFTADQMLPACCQGALGFQIRANDTRMKELLRFMKDPATETKVSMERAFLRRL 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C++ IAG + GS + GIV A DG+ F E G+ DA +G + A+ +
Sbjct: 236 EGGCQAPIAGHSVLTGSKICMKGIVAALDGRTFIEQFIEGHAEDAEKLGLELAERVLNAG 295
Query: 301 NKNVFN 306
K++
Sbjct: 296 AKDILE 301
>gi|313496556|gb|ADR57922.1| HemC [Pseudomonas putida BIRD-1]
Length = 313
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVMAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|56698469|ref|YP_168844.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
gi|56680206|gb|AAV96872.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
Length = 319
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 134/307 (43%), Positives = 188/307 (61%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L +P I+ +ST GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRHRLGAAFDLPEDAFEIVVISTTGDNRAMIEADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ ++ G+ID AVHS KDMP + GL + +LPRED+RD FIS +++D
Sbjct: 71 KGLFTKEIEEAMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L +V+GTSSLRRKA LL R D+ V++FRG ++TRL KL+ A LA AGI+RL
Sbjct: 131 LPLGAVVGTSSLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLN 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+V ++ +D P+ QGAI IE +++ +A E++ I+H +T + ERA LA L
Sbjct: 191 MAEVPATAISPDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+TL G VL DG + R+G+ D +G + A+ + +
Sbjct: 251 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAITLDRSGDVADGPALGTEMARELLAQA 310
Query: 301 NKNVFNF 307
F++
Sbjct: 311 GPGFFDW 317
>gi|157412912|ref|YP_001483778.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215]
gi|167008816|sp|A8G3L1|HEM3_PROM2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157387487|gb|ABV50192.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215]
Length = 318
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 158/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLDVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVSKKNDYYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + LY G+V + DGK + GN + +G + A+ ++
Sbjct: 239 RELEGGCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 LQGADKIL 306
>gi|148545465|ref|YP_001265567.1| porphobilinogen deaminase [Pseudomonas putida F1]
gi|167008818|sp|A5VWX3|HEM3_PSEP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148509523|gb|ABQ76383.1| hydroxymethylbilane synthase [Pseudomonas putida F1]
Length = 313
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLET 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|15676445|ref|NP_273584.1| porphobilinogen deaminase [Neisseria meningitidis MC58]
gi|11386833|sp|Q9K0P6|HEM3_NEIMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|7225764|gb|AAF40968.1| porphobilinogen deaminase [Neisseria meningitidis MC58]
gi|254671891|emb|CBA04160.1| Porphobilinogen deaminase [Neisseria meningitidis alpha275]
gi|308388723|gb|ADO31043.1| putative porphobilinogen deaminase [Neisseria meningitidis
alpha710]
gi|316985397|gb|EFV64345.1| porphobilinogen deaminase [Neisseria meningitidis H44/76]
gi|319409917|emb|CBY90242.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS;
pre-uroporphyrinogen synthase) [Neisseria meningitidis
WUE 2594]
gi|325127627|gb|EGC50543.1| porphobilinogen deaminase [Neisseria meningitidis N1568]
gi|325139808|gb|EGC62341.1| porphobilinogen deaminase [Neisseria meningitidis CU385]
gi|325200773|gb|ADY96228.1| porphobilinogen deaminase [Neisseria meningitidis H44/76]
Length = 311
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|78778881|ref|YP_396993.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9312]
gi|123741491|sp|Q31C38|HEM3_PROM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78712380|gb|ABB49557.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. MIT
9312]
Length = 316
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 161/308 (52%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLEK--NIPNLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGQADIAVHSLKDLPTNLPSGLKLGCITKREDPADALVVSKKNDCYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L ++ D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LETLPAGSIVGTSSLRRLAQLRNKYPHLNFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSDDKKVLEIISVLEDKPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + LY G+V + DG+ + GN D +G++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSSIQNEQLYLTGMVASLDGERLIKDQYIGNIDDPEQVGKELAKKLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 LQGADKIL 306
>gi|87302648|ref|ZP_01085465.1| porphobilinogen deaminase [Synechococcus sp. WH 5701]
gi|87282992|gb|EAQ74949.1| porphobilinogen deaminase [Synechococcus sp. WH 5701]
Length = 317
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 145/309 (46%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MAGTTLRIASRRSQLAMVQTHWVRDELTRAH--PDLEISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + H
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPDGLMLGCITEREDPADALVLHERHRGCS 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L SV+GTSSLRR A L D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHFQFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGHRIDALIDPSISLHAVGQGALGIECRHGDSAVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+L+G C+ I + +G L G+V + DG G + D +G AQ +R
Sbjct: 239 RQLEGGCQVPIGVNSRFEGEELVLTGMVASLDGLRLIRDEARGPQQDPEAVGTSLAQLLR 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 SQGAGEILE 307
>gi|148238945|ref|YP_001224332.1| porphobilinogen deaminase [Synechococcus sp. WH 7803]
gi|147847484|emb|CAK23035.1| Porphobilinogen deaminase [Synechococcus sp. WH 7803]
Length = 319
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 3 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 61 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEHT 120
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+
Sbjct: 121 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 180
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL
Sbjct: 181 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 240
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + G+ L G+V + DG+ R G+ D IGR A ++
Sbjct: 241 RELEGGCQVPIGVNSRIDGTELILTGMVASLDGQRLIRDERRGSLTDPEAIGRALAADLK 300
Query: 298 FISNKNVF 305
+
Sbjct: 301 SRGAGEIL 308
>gi|218767661|ref|YP_002342173.1| porphobilinogen deaminase [Neisseria meningitidis Z2491]
gi|11386831|sp|Q9JVS4|HEM3_NEIMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|121051669|emb|CAM07972.1| putative porphobilinogen deaminase [Neisseria meningitidis Z2491]
Length = 311
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|317154529|ref|YP_004122577.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2]
gi|316944780|gb|ADU63831.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2]
Length = 310
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 161/304 (52%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A + L H P + ++ + TKGD+I + L ++GGKG
Sbjct: 1 MKQLTIATRGSALALWQANHIKDRLEAEH--PGLTVHLLKIKTKGDKILDVPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G AVHS KD+PT+L +GL++ RE D +S + L L
Sbjct: 59 LFVKEIEEALLDGRAQLAVHSMKDVPTELPEGLEVGVIPEREASTDSLLSVKYEGLAGLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR++ L R D+ + RG ++TR+ KL + AI++A AG+ RL+
Sbjct: 119 RGAVVGTSSLRRQSQLATLRPDLKIESLRGNLDTRVRKLLAGEFDAIVVATAGLNRLELT 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
EIL DF P+ QGA+ IE H N + +++ +NHE + V ER FL LDG
Sbjct: 179 APKHEILGPPDFLPAVAQGALGIEYHSANAEVAAMLQFLNHEPSKRQVLAERGFLTGLDG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA ++ G L G V DG ++ G +A +IG A+ + K
Sbjct: 239 GCQVPIAAWSVIDGERLRLTGFVADVDGSRPIRMTAEGPVDNAWDIGAALAEKVLAAGGK 298
Query: 303 NVFN 306
+ +
Sbjct: 299 AILD 302
>gi|26986930|ref|NP_742355.1| porphobilinogen deaminase [Pseudomonas putida KT2440]
gi|38258017|sp|Q88RE5|HEM3_PSEPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|24981540|gb|AAN65819.1|AE016210_7 porphobilinogen deaminase [Pseudomonas putida KT2440]
Length = 313
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG
Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L
Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ IA +A +G L+ G+V G R A +G A+ +
Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEAIL 303
>gi|320529107|ref|ZP_08030199.1| porphobilinogen deaminase [Selenomonas artemidis F0399]
gi|320138737|gb|EFW30627.1| porphobilinogen deaminase [Selenomonas artemidis F0399]
Length = 311
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKEMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G+ID AVHS KDMPT++ GL I A R D D F+S+ ++++
Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPTEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ + A++LA AG++RL
Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGEFDAVVLAAAGLRRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ +L P+ GQGA+ IE ++ + + + D + ERAFL +
Sbjct: 179 LGDRIRSVLPRAMMLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRV 238
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ + +A G LY ++ + DG +G A IG A+ + +
Sbjct: 239 EGGCQIPVGVYAEIGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDM 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GGREIL 304
>gi|298493147|ref|YP_003723324.1| porphobilinogen deaminase ['Nostoc azollae' 0708]
gi|298235065|gb|ADI66201.1| porphobilinogen deaminase ['Nostoc azollae' 0708]
Length = 322
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL
Sbjct: 9 RPIRIGSRKSQLALVQTYWVQEQLQK--SFPNITFEVHTMSTQGDKILDVALAKIGDKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E ++I+ EID AVHS KD+PT L +GL ++A RE+ D + H + +
Sbjct: 67 FTKELELRMINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVLHKKHKDQQIET 126
Query: 124 ---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+VIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL
Sbjct: 127 LPAGAVIGTSSLRRLAQLRYKFPHFTFKDVRGNLITRIGKLDAGEYDALILAVAGLERLD 186
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL + + GQGA+ IE ++ + L+K I H T D ER+FL L
Sbjct: 187 MSHRIDQILPPDISLHAVGQGALGIECRSDDTEVISLLKAIEHSQTRDRCLAERSFLRVL 246
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I L G+V + DG+ + + G DA +G A+ +R
Sbjct: 247 EGGCQVPIGVDTQINSKELTLKGLVASVDGQKLVKDTVTGTAADAEKLGAQLARILRQKG 306
Query: 301 NKNVFN 306
+
Sbjct: 307 ATEILE 312
>gi|289548019|ref|YP_003473007.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484]
gi|289181636|gb|ADC88880.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484]
Length = 300
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 121/301 (40%), Positives = 183/301 (60%), Gaps = 6/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L D+ H + ++P++T GD+IT+ L +IGGKGLF
Sbjct: 3 IRIGTRRSQLALWQANYVKRKLEDM----GHTVELVPITTTGDKITDAPLAKIGGKGLFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G+ID AVHS KD+PTKL GL + A RE DV IS Q L++L +
Sbjct: 59 KEIEEALLRGDIDVAVHSLKDVPTKLPDGLTLGAITERELPYDVLISRDGQRLENLPTGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRRK + R R D+ + D RG ++TR+ KL+ + AI+LAYAGI+R+ E I
Sbjct: 119 VVGTSSLRRKVQIKRMRRDLVIKDLRGNVDTRIRKLDEGQYDAIVLAYAGIRRMGWENRI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+I +EDF P+ GQG++ +E ++ K +E++ +++H ++ V ERAFL ++G C+
Sbjct: 179 VQI--LEDFIPAVGQGSMAVEIREDDEKIREVISLLDHRESRIRVEAERAFLEVMEGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A+ GS L+ G + +G+ F E GN A +GR+ A+ I +++
Sbjct: 237 VPMGAIAWLDGSRLFMKGFLSDLEGENFVEAYVEGNVEKAQLLGRELAEKILSQGGRSIL 296
Query: 306 N 306
Sbjct: 297 E 297
>gi|260435886|ref|ZP_05789856.1| porphobilinogen deaminase [Synechococcus sp. WH 8109]
gi|260413760|gb|EEX07056.1| porphobilinogen deaminase [Synechococcus sp. WH 8109]
Length = 317
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 151/308 (49%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + +T
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNTKNHAYK 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L SV+GTSSLRR A L + D RG + TRL KL+N ++LA AG+
Sbjct: 119 LDTLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDNGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE P+ E +KV+ H T ERAFL
Sbjct: 179 RLGFGDRIHQLIPGDISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G DA IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQASGAASDAEAIGIALANTLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 GQGAGEIL 306
>gi|126695860|ref|YP_001090746.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301]
gi|158513419|sp|A3PBM0|HEM3_PROM0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|126542903|gb|ABO17145.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301]
Length = 316
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYK 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K
Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLIFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL
Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINILEDKPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + L G+V + DG+ + GN D IG++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSNIQNEKLCLTGMVASLDGERLIKDQHIGNINDPEEIGKELAKKLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 QQGAEEIL 306
>gi|317969656|ref|ZP_07971046.1| porphobilinogen deaminase [Synechococcus sp. CB0205]
Length = 317
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 104/309 (33%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H I I ++T+GD+I + L +IG
Sbjct: 1 MAGSQLRIASRRSQLAMVQTHWVRDELAKAHA--GLEITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + K E +KV+ H T ERAFL
Sbjct: 179 RLGLSDRIHELIDPSISLHAVGQGALGIECRDGDAKVLEQIKVLEHVPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK G++ + +G D A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGKRLIRDQVQGDQTNPEALGIDLAHKLK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 AQGAGEILE 307
>gi|158337071|ref|YP_001518246.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017]
gi|158307312|gb|ABW28929.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017]
Length = 314
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 149/304 (49%), Gaps = 5/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LAL + L P + + +ST+GD I + L +IG KGLFT
Sbjct: 2 IRIGSRKSQLALVQTHWVQGELQK--HFPEYEFEVCTMSTQGDNILDVALAKIGDKGLFT 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122
+E+E ++ E D AVHS KD+PT L +GL + R D D + H L L
Sbjct: 60 KELEVSMLRKETDLAVHSLKDLPTNLPEGLCLGVVTERVDPADALVVHENFKAYQLDTLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L + D RG + TRL KL+ + I+LA AG++RL
Sbjct: 120 EGAVIGTSSLRRLAQLRYNYPHLEFKDIRGNLNTRLQKLDEGEYDGIILAVAGLQRLGFG 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +++ + GQGA+ IE + + +K + HE + ER+FL EL+G
Sbjct: 180 DRIHQVIPANISLHAVGQGALGIECREGDEEIMAFIKALEHEPSAHRCTAERSFLHELEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I K L G+V + DGK + + +G A +G D AQ +R +
Sbjct: 240 GCQVPIGVNTSLKEGQLTLVGMVASLDGKRLIKDTVSGPIASATQLGIDLAQKVREQGAQ 299
Query: 303 NVFN 306
+
Sbjct: 300 EILE 303
>gi|126658960|ref|ZP_01730102.1| porphobilinogen deaminase [Cyanothece sp. CCY0110]
gi|126619758|gb|EAZ90485.1| porphobilinogen deaminase [Cyanothece sp. CCY0110]
Length = 317
Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 4 SSRAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E ++ ++D AVHS KD+PT L GL + R + D + H + L
Sbjct: 62 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPDGLMLGCVTERVNPADALVVNEKHKDKQL 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++R
Sbjct: 122 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQR 181
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ + + GQGA+ IE +P+ +L+K + H +T D ERAFL
Sbjct: 182 LDMSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILDLLKALEHPETRDRCYAERAFLR 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL+G C+ I + + L G+V + DGK + + G + A +G++ A +R
Sbjct: 242 ELEGGCQVPIGVNTKIENNFLTLTGMVASLDGKTLIKDTIEGEQDQAEKLGQELAMRLRD 301
Query: 299 ISNKNVF 305
+
Sbjct: 302 AGATEIL 308
>gi|212703312|ref|ZP_03311440.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098]
gi|212673272|gb|EEB33755.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098]
Length = 311
Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 158/306 (51%), Gaps = 3/306 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K I TR S LAL A ++ L + P NI + + T+GD I + L+++GGK
Sbjct: 1 MRKNLVIATRGSQLALWQAEHVKACLESLE--PGLNISLRVIKTRGDIILDVPLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+ G D AVHS KD+P L +GL + RE D +S+ SL +L
Sbjct: 59 GLFVKEIEEALLDGSADLAVHSIKDVPMVLPEGLVLGCVPQREICVDCLLSNRYGSLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR+A LL R D+ ++ RG ++TRL K+ + AI+LA AG+KRL
Sbjct: 119 PPGARVGTSSLRRQAQLLNLRPDLEILSLRGNVDTRLRKMKEGEYDAIVLASAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
F P+ GQGA+ IE ++ + EL+ + H T V ER FLA LD
Sbjct: 179 SADRMHHFEAASFVPAVGQGALGIECRGDDGEVLELLSRMEHRPTRICVEAERGFLAGLD 238
Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG A G+V DG + + G A G A+++
Sbjct: 239 GGCQVPIAGHAEMLDDDRFILDGLVAEVDGSVILREQQEGTAATARETGFALARHLLDKG 298
Query: 301 NKNVFN 306
K++ +
Sbjct: 299 GKDILD 304
>gi|150387913|ref|YP_001317962.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF]
gi|229836103|sp|A6TJD5|HEM3_ALKMQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|149947775|gb|ABR46303.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF]
Length = 316
Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +IG+R S LAL A + L + K P + II ++T GDRI ++TL +IGGKG
Sbjct: 1 MRTIKIGSRASQLALVQAEIIINMLKE--KFPQYTYEIIKITTLGDRILDKTLDKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+K L +ID A+HS KDMP + + L + A RED RDV I+ +SL++L
Sbjct: 59 LFVKEIQKALAEEKIDLAIHSMKDMPGETPEELVLGAITKREDPRDVLITRENKSLEELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIG+SSLRR+A ++ R DI V+ RG + TRL K+ ++LA AG+ RL +
Sbjct: 119 KGAVIGSSSLRRQAQVMALRGDIKVVPIRGNVGTRLGKIETESLDGVILAAAGLNRLGLK 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I L IEDF P+ GQGA+ E + + E++ INHE+T+ V ERAFL L+G
Sbjct: 179 EKISSYLEIEDFTPAVGQGALGCEARRKDIEMLEMLLAINHEETYRCVMAERAFLKLLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C I + +G L+ G+V +SDG+ + G+ D +G + + K
Sbjct: 239 GCHVPIGAYGQQQGQELHMTGMVASSDGRRVIKEQVMGDIADFQALGIQLGETLIEKGAK 298
Query: 303 NVFN 306
+
Sbjct: 299 EILE 302
>gi|72383664|ref|YP_293019.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL2A]
gi|123773715|sp|Q46GS7|HEM3_PROMT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72003514|gb|AAZ59316.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. NATL2A]
Length = 315
Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/309 (33%), Positives = 152/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQREH--PDLVITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G + AVHS KD+PT L GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPDGLILGCITKREDPSDALVVNEKNQIHK 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ + + GQGA+ IE K +++K + HE T ER+FL
Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + L G+V + DGK + G+ A IG D A ++
Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 GRGAGEILE 307
>gi|254671436|emb|CBA08950.1| Porphobilinogen deaminase [Neisseria meningitidis alpha153]
Length = 311
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/305 (33%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|269213761|ref|ZP_05982800.2| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685]
gi|269145303|gb|EEZ71721.1| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685]
Length = 325
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVFN 306
+ +
Sbjct: 313 ARELIE 318
>gi|161869466|ref|YP_001598634.1| porphobilinogen deaminase [Neisseria meningitidis 053442]
gi|161595019|gb|ABX72679.1| porphobilinogen deaminase [Neisseria meningitidis 053442]
Length = 316
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 6 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++ R + D F+S+ L++
Sbjct: 64 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALATIGERANPFDAFVSNQYTRLEE 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 124 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 184 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 244 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 303
Query: 301 NKNVF 305
+ +
Sbjct: 304 AQELI 308
>gi|166367009|ref|YP_001659282.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843]
gi|166089382|dbj|BAG04090.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843]
Length = 319
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 159/305 (52%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL
Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
FT+E+E ++ ID AVHS KD+PT L +GL + R + D + ++ L
Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDT 125
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL
Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I + L G+V + DGK + S +G+ +GRD A +R
Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVREAG 305
Query: 301 NKNVF 305
+
Sbjct: 306 AGEIL 310
>gi|121634334|ref|YP_974579.1| porphobilinogen deaminase [Neisseria meningitidis FAM18]
gi|120866040|emb|CAM09778.1| putative porphobilinogen deaminase [Neisseria meningitidis FAM18]
gi|325131787|gb|EGC54488.1| porphobilinogen deaminase [Neisseria meningitidis M6190]
gi|325137677|gb|EGC60254.1| porphobilinogen deaminase [Neisseria meningitidis ES14902]
Length = 311
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|325202672|gb|ADY98126.1| porphobilinogen deaminase [Neisseria meningitidis M01-240149]
Length = 311
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGVVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|260425851|ref|ZP_05779830.1| porphobilinogen deaminase [Citreicella sp. SE45]
gi|260420343|gb|EEX13594.1| porphobilinogen deaminase [Citreicella sp. SE45]
Length = 319
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 136/309 (44%), Positives = 184/309 (59%), Gaps = 4/309 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEI 58
+P RIGTR SPLALA A ETR L D + P I+ + T GD +R L EI
Sbjct: 9 DQPLRIGTRGSPLALAQAHETRDRLCDTFALSPEAFEIVVIRTTGDDRSMIAADRPLKEI 68
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G KGLFT+EIE++L++G ID AVHS KDMPT +GL + YLPRED+RD FIS L
Sbjct: 69 GNKGLFTKEIEEQLMTGGIDIAVHSMKDMPTLQPEGLMLDCYLPREDVRDAFISPGHGGL 128
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG+ R
Sbjct: 129 GDLPAGTVVGTSSLRRRAQLLNRRPDLRVVEFRGNLQTRLKKLEDGVAAATFLAMAGLNR 188
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ ++ ++ ++ P+ QGAI IE ++ +A E++ I+ DT + ERAFLA
Sbjct: 189 MGMTQLPMTAMSPDEMLPAVAQGAIGIERRSDDSRAAEMLAAIHDRDTALRLGAERAFLA 248
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IAG A G+ L G +LA DG H G + +GR AQ +
Sbjct: 249 ELDGSCETPIAGLAELDGTALRLRGELLAPDGSASHAGEIAGPADNGPELGRLLAQQLLA 308
Query: 299 ISNKNVFNF 307
+ + F +
Sbjct: 309 RAGADFFAW 317
>gi|317129820|ref|YP_004096102.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522]
gi|315474768|gb|ADU31371.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522]
Length = 310
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 168/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LA+ L + + I + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSNLAMTQTKWVIEQLKSLGL--NYEFEIKEIVTKGDKILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIEK + GEID AVHS KD+P ++ G+ + A R D RD FIS++ + L DL
Sbjct: 59 LFVKEIEKAMYDGEIDIAVHSMKDLPAEIADGMAVGAIPKRVDPRDAFISNSGKGLMDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L R D+ + RG I+TRL K AI+LA AGI+R+
Sbjct: 119 AGSIVGTSSLRRSAQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGIERVGWT 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ E L E P+ GQGA+ IE ++ + L+ IN DT +V ERAFL ++
Sbjct: 179 SDIVTEFLEPEVCLPAVGQGALGIECRADDKEVLALLAKINDSDTEKTVTAERAFLHTVE 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ +AG+A + + + +V + DG+ S G D + IG++ AQ +
Sbjct: 239 GGCQVPVAGYATLQDNGEIALTALVGSPDGQQIFRESIAGT--DPVAIGKEVAQRMLKAG 296
Query: 301 NKNVFN 306
K V +
Sbjct: 297 AKKVLD 302
>gi|194477303|ref|YP_002049482.1| porphobilinogen deaminase [Paulinella chromatophora]
gi|171192310|gb|ACB43272.1| porphobilinogen deaminase [Paulinella chromatophora]
Length = 313
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 153/308 (49%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H P I I ++T+GD+I + L +IG
Sbjct: 1 MVSSFLRIASRRSQLAMVQTHWVRDQLAQAH--PSLEITIETMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119
KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPDGLVLGCVTEREDPADALVINKKYQDRL 118
Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L S++GTSSLRR A L + D RG + TRL KL++ + ++LA AG++
Sbjct: 119 LDTLPNGSIVGTSSLRRLAQLRHHFPHLVFKDIRGNVITRLEKLDSGEFDCLILAAAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I EI++ + GQGA+ IE + + +KV+ H T ERAFL
Sbjct: 179 RLGLGSRIHEIIDSSISLHAVGQGALGIECRDGDLDILKQIKVLEHAPTNYRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I KG+ L G+V + DGK G+ + +IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRIKGNQLILTGMVASLDGKRLIRDEVYGDLINPEDIGIKLANILK 298
Query: 298 FISNKNVF 305
+++
Sbjct: 299 EQGAEDIL 306
>gi|148244854|ref|YP_001219548.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA]
gi|226740640|sp|A5CW34|HEM3_VESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146326681|dbj|BAF61824.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA]
Length = 304
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +I TR SPLAL A +S L ++ P ++++ ++TKGD+I N +L++IGGK
Sbjct: 1 MNKTLKIATRQSPLALWQAQHVKSRLEKIY--PNLTVILVKITTKGDQILNSSLSKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P ++ + ++ A L E+ D F+S+ S+ DL
Sbjct: 59 GLFIKELEISIMKGMSDIAVHSMKDVPYEIPQEFELGAILKCENPFDAFVSNHFSSIDDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ +GT S+RR L R D+ +ID RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 119 PKNAKVGTCSMRRILQLKVIRPDLQIIDLRGNVNTRLKKLDDGEFDAIILACAGLIRLGF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
IK+ + P+ GQGAI IE N+ + +L+K + +T + ERA +L+
Sbjct: 179 GNRIKQQIPENQNLPAVGQGAIGIEIRENDKEILDLIKPLIDIETSYRIIAERAMNTQLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C +AGFA + G+V D + + G+ A +G + A + +
Sbjct: 239 GGCSVPVAGFATINNKQITLTGLVGNIDTGVILKEKIFGHVSQAEILGIELANKLILLGA 298
Query: 302 KNVF 305
K++
Sbjct: 299 KDIL 302
>gi|325129681|gb|EGC52495.1| porphobilinogen deaminase [Neisseria meningitidis OX99.30304]
gi|325203630|gb|ADY99083.1| porphobilinogen deaminase [Neisseria meningitidis M01-240355]
Length = 311
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|33863541|ref|NP_895101.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313]
gi|39931399|sp|Q7V697|HEM3_PROMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33640990|emb|CAE21448.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313]
Length = 317
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG
Sbjct: 1 MVLTQLRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQ 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LDTLPEGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE +P+ E +K + H+ T ERA L
Sbjct: 179 RLGFGDRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEAIKALEHKPTAQRCLAERALL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + + L G+V + DGK + G IG++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEAIGKELAETLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 SQGAGEIL 306
>gi|124022436|ref|YP_001016743.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303]
gi|158512753|sp|A2C7L8|HEM3_PROM3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123962722|gb|ABM77478.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303]
Length = 317
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG
Sbjct: 1 MVLTQLRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQ 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LDTLPEGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE +P+ E++K + H+ T ERA L
Sbjct: 179 RLGFGDRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEVIKALEHKPTAQRCLAERALL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + + L G+V + DGK + G IG++ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEAIGKELAETLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 SQGAGEIL 306
>gi|86158914|ref|YP_465699.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775425|gb|ABC82262.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 314
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P L GL +++ RED RD S ++L L +
Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLASVPQREDPRDALCSPRWKTLAALPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEVVRGNVETRLRKASEGL-DAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E ++ + + + +T + ER FLA ++G C+
Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLKRLAALEDPETRVRIEAERGFLARIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAG A G + +V + DG R G +A +G A+ + +
Sbjct: 239 VPIAGHATLAGGKITIRALVASLDGTRVIRGERTGAYAEARALGESLAEELLSRGADQIL 298
>gi|307154737|ref|YP_003890121.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822]
gi|306984965|gb|ADN16846.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822]
Length = 320
Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG KG
Sbjct: 7 TRTVRIGSRKSQLALVQTYWVQGELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
LFT+E+E +I +ID AVHS KD+PT L GL + R D D + H + L
Sbjct: 65 LFTKELEVGMIDHQIDLAVHSLKDLPTNLPSGLILGCVTERVDPADGLVVNEKHKDKQLD 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +VIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG+ RL
Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLTRL 184
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I +I+ E + GQGA+ IE ++ + +L+KV+ H+ T D ERAFL E
Sbjct: 185 GMSDRIHQIIPSEISLHAVGQGALGIECRADDVEVLDLLKVLEHQATRDRCYAERAFLRE 244
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I +G TL G+V + DG+ + S G DA +G++ A +R
Sbjct: 245 LEGGCQVPIGVNTSVEGDTLTLTGMVASLDGQKLIKDSITGKASDADQLGQELAIRMRNA 304
Query: 300 SNKNVF 305
+
Sbjct: 305 GAGEIL 310
>gi|325135871|gb|EGC58483.1| porphobilinogen deaminase [Neisseria meningitidis M0579]
gi|325207582|gb|ADZ03034.1| porphobilinogen deaminase [Neisseria meningitidis NZ-05/33]
Length = 311
Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|88807654|ref|ZP_01123166.1| porphobilinogen deaminase [Synechococcus sp. WH 7805]
gi|88788868|gb|EAR20023.1| porphobilinogen deaminase [Synechococcus sp. WH 7805]
Length = 317
Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELESAH--PGMAISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNADHT 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL
Sbjct: 179 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + G L G+V + DG R G+ D IGR A ++
Sbjct: 239 RELEGGCQVPIGVNSRIDGQELILTGMVASLDGLRLIRDERRGSLTDPEAIGRALAADLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 SRGAGEIL 306
>gi|254804423|ref|YP_003082644.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14]
gi|254667964|emb|CBA04229.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14]
Length = 311
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQASAEYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|159026408|emb|CAO88937.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 319
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 159/305 (52%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL
Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
FT+E+E ++ ID AVHS KD+PT L +GL + R + D + ++ L
Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSENQDYQLDT 125
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL
Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL
Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I + L G+V + DGK + S +G+ +GRD A +R
Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVRDAG 305
Query: 301 NKNVF 305
+
Sbjct: 306 AGEIL 310
>gi|238018694|ref|ZP_04599120.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748]
gi|237865165|gb|EEP66455.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748]
Length = 319
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 111/312 (35%), Positives = 173/312 (55%), Gaps = 8/312 (2%)
Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54
M KK RIGTR S LAL A + L ++ P + ++ +TKGDRI +
Sbjct: 1 MRKKANAMRDHIRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKP 58
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
L ++GGKGLFT E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S
Sbjct: 59 LAQVGGKGLFTAELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPV 118
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
++L L + +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA A
Sbjct: 119 YKTLDKLPEGACVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQA 178
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+KRL + I ++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER
Sbjct: 179 GLKRLGLDDQITQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGER 238
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
+FL +L+G C+ + L ++ + DGK +E +G A +G++ A+
Sbjct: 239 SFLRQLNGGCQVPMGVHGTINKGQLILKAMIASLDGKTVYEGEISGPAKKAEILGKNLAK 298
Query: 295 YIRFISNKNVFN 306
+ K++ +
Sbjct: 299 ALYEEGGKHIVD 310
>gi|313668981|ref|YP_004049265.1| porphobilinogen deaminase [Neisseria lactamica ST-640]
gi|313006443|emb|CBN87906.1| putative porphobilinogen deaminase [Neisseria lactamica 020-06]
Length = 326
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPKGAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKLADDG 313
Query: 301 NKNVF 305
+ +
Sbjct: 314 ARELI 318
>gi|78212229|ref|YP_381008.1| porphobilinogen deaminase [Synechococcus sp. CC9605]
gi|123729770|sp|Q3ALS9|HEM3_SYNSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78196688|gb|ABB34453.1| porphobilinogen deaminase [Synechococcus sp. CC9605]
Length = 317
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 150/308 (48%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNQAYK 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L SV+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE P+ E +KV+ H T ERAFL
Sbjct: 179 RLGFSDRIHQLIPGEISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G +A IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQTSGEASEAEAIGIALANTLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 GQGAGEIL 306
>gi|262199948|ref|YP_003271157.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365]
gi|262083295|gb|ACY19264.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365]
Length = 320
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 105/317 (33%), Positives = 160/317 (50%), Gaps = 13/317 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ I TR S LAL A R + V P + ++ + T+GD+I + L++IGG
Sbjct: 1 MSERTIHISTRGSQLALWQAHHVRDEIRRVR--PAWQVELVIIKTQGDKILDVPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ G D AVHS KD+P +L GL ++A RED D + + L +
Sbjct: 59 KALFVKEIEQALLDGRADVAVHSMKDVPAELAPGLFMAATSRREDPYDALCTRDGRGLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA + +GTSSLRR+ +L R D+ + RG + TRL KL++ A++LA AG+KRL
Sbjct: 119 LAEGATLGTSSLRRQCQILARRPDLRIEMLRGNVPTRLGKLDDGSFDAVILAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL-----VKVINHEDTWDSVNCERA 235
+ I + L+ P+ GQG + IET + A + ++ V ERA
Sbjct: 179 HGERISQRLDGGVCVPAVGQGVLGIETRQGDAPADRELVEALREALHDPAEERRVVAERA 238
Query: 236 FLAELDGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A L GSC++ +A A +G TL G+ DG G DA +G
Sbjct: 239 MMAALGGSCQTPLAAHASYRGDSDPVAGTLVIEGLCGRPDGSEILRAQVEGRAEDAQALG 298
Query: 290 RDAAQYIRFISNKNVFN 306
A+ +R + + +
Sbjct: 299 SSLAEELRGQGAQAIID 315
>gi|78185247|ref|YP_377682.1| porphobilinogen deaminase [Synechococcus sp. CC9902]
gi|123770934|sp|Q3AWQ4|HEM3_SYNS9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78169541|gb|ABB26638.1| hydroxymethylbilane synthase [Synechococcus sp. CC9902]
Length = 317
Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats.
Identities = 104/308 (33%), Positives = 154/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H +
Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + + GQGA+ IE N P E++KV+ H T ERAFL
Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENQPDVMEIIKVLEHGPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G D +IG + A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREQASGPSTDPESIGLELAATLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 GLGAGEIL 306
>gi|222150055|ref|YP_002551012.1| porphobilinogen deaminase [Agrobacterium vitis S4]
gi|221737037|gb|ACM38000.1| porphobilinogen deaminase [Agrobacterium vitis S4]
Length = 309
Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats.
Identities = 164/306 (53%), Positives = 212/306 (69%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A ETR L H + P I+ LST GDRIT+R+L EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHETRERLATAHGLSPDMFEIVVLSTTGDRITDRSLAEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT E+E++L+SG +D AVHS+KDMPT L GL+ISAYLPRED+RD FI TA L +
Sbjct: 61 KGLFTLELEQQLLSGGLDFAVHSSKDMPTALPDGLEISAYLPREDMRDAFIGRTAPKLLE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA +VIG++SLRR+AL+ R R D+ VI +RG +ETRL KL + A LLA AG+KRL
Sbjct: 121 LAEGAVIGSASLRRQALIRRLRPDLQVITYRGAVETRLRKLAAGEVDATLLAVAGLKRLD 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KE VI + L++E FPP+P QGAICIE V++ + Q+L+ INH T+D+V+CERAFLA L
Sbjct: 181 KETVITQYLDLESFPPAPAQGAICIEARVDDRRIQDLLAPINHRPTFDAVSCERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG+A G + G +L DG++ H V G D + +G A + +R +
Sbjct: 241 DGSCRTPIAGYAISDGEMIRLTGTILTPDGQVSHSVEAEGRCADGLALGWSAGEKVRDKA 300
Query: 301 NKNVFN 306
F
Sbjct: 301 GPGFFE 306
>gi|291279209|ref|YP_003496044.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1]
gi|290753911|dbj|BAI80288.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1]
Length = 305
Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 164/303 (54%), Gaps = 3/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
IGTR S LAL A +S + H ++ + + T GD+I + L +IGGKG
Sbjct: 1 MNKLVIGTRGSKLALWQANHIKSLIESTHH---IDVELKIIKTTGDKILDTPLAKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE++L++ +D AVHS KD+P +L GL++ + RE+ D F+S SL +L
Sbjct: 58 LFVKEIEEELLNKNVDIAVHSMKDVPVELPDGLEVGVFPVREEPYDAFLSVKYNSLDELP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRRK L+R + + D RG ++TR+ KL + AI+LA AG+KRL
Sbjct: 118 DGAVIGTSSLRRKIQLMRKYPHLVIKDLRGNVDTRIRKLTEGQYDAIILAKAGLKRLGLL 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ +K+ ++ P+ QG + IE ++ Q+++ +NHE+T ERAFL L+G
Sbjct: 178 EHVKQTIDDTLMIPAVCQGTLGIEYREDDQDVQKVIGFLNHEETVFRTKAERAFLKRLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + A G L G + DG + G++ DA+ +G A+ I K
Sbjct: 238 GCQVPLGCIANLVGDRLILKGFLANLDGSKYIYEEIEGDKTDAVKLGLKLAKNILGQGGK 297
Query: 303 NVF 305
+
Sbjct: 298 EII 300
>gi|317486609|ref|ZP_07945428.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6]
gi|316922143|gb|EFV43410.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6]
Length = 308
Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A + SL VH P + + + TKGD I + L ++GG
Sbjct: 1 MEK--LVIATRGSRLALWQANHVKDSLEAVH--PGLAVELNIIKTKGDIILDVPLAKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+SG D AVHS KD+P +L +GL + RED D+F+S SL++
Sbjct: 57 KGLFVKEIEEALLSGAADIAVHSMKDVPMELPEGLILGIVPEREDPTDLFLSVDYDSLEN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A +L R D+ V+ RG ++TRL KL + AI++A AG+KRL
Sbjct: 117 LPAGAVVGTSSLRRQAQVLAQRPDLEVVSLRGNVDTRLRKLTEGQFAAIIMATAGMKRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ L F P+ GQGA+ IE + E++ + H T V ER LA L
Sbjct: 177 LSVPKECPLAPPAFIPAVGQGALGIEFREDRKDLAEMLSFMEHRPTRICVEAERGLLAGL 236
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C+ IAG A T G+V DG + G +A +G A+ +
Sbjct: 237 DGGCQVPIAGHAEMLDDGTFELEGLVGEVDGSVIIRRKVTGRADEARAVGFALARSLAED 296
Query: 300 SNKNVF 305
+
Sbjct: 297 GGAEIL 302
>gi|67924108|ref|ZP_00517554.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501]
gi|67854033|gb|EAM49346.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501]
Length = 318
Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L + P + +ST+GD+I + L +IG K
Sbjct: 4 SSRAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118
GLFT+E+E ++ ++D AVHS KD+PT L +GL + R + D + H + L
Sbjct: 62 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVHEKHRDKQL 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L SVIGTSSLRR A L ++ D RG + TRL KL++ + AI+LA AG++R
Sbjct: 122 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLGKLDSGEYDAIILAVAGLQR 181
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +++ + + GQGA+ IE +P+ EL+KV+ +T D ERAFL
Sbjct: 182 LDMSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILELLKVLEDTETRDRCYAERAFLR 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ I + + L G+V + DGK + + G A ++G+ A +R
Sbjct: 242 QLEGGCQVPIGVNTKIENNVLTLIGMVASLDGKTLIKDTIEGEPSQAESLGQTLATRLRD 301
Query: 299 ISNKNVF 305
+
Sbjct: 302 AGATEIL 308
>gi|258591837|emb|CBE68140.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [NC10 bacterium
'Dutch sediment']
Length = 315
Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++GTR SPLAL A L + P ++ I+P+ T GD+ + L+++GG
Sbjct: 1 MRSHTVKLGTRGSPLALCQAGLVTEELRR--RWPDLDVTIVPIKTSGDKFLDVVLSQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ G ID AVHS KD+P +L GL A + RED D ++ D
Sbjct: 59 KGLFVKEIEEALLDGRIDLAVHSLKDLPAELAPGLCEGAVMRREDPLDALVARNGLRFTD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSSLRR+ L R D+ + RG ++TRLNKL A++LA AG+ RL
Sbjct: 119 LPRGARIGTSSLRRQVQFLHCRPDLQIESLRGNVQTRLNKLETLGLEAVVLAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E L + P+ GQGA+ IE ++ + E V+ +NH +T + ERAFL L
Sbjct: 179 LQDRITERLQPDLCLPAIGQGALVIEIREDDRQTAERVETLNHRETRQATTAERAFLRRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC + IA F +G TL G+V DGK + G +G+ A +
Sbjct: 239 GGSCVTPIAAFGRLEGETLELTGMVAGLDGKRLLRQAVVGEAGAPEQVGQTLADRLLSAG 298
Query: 301 NKNVF 305
+
Sbjct: 299 AGEII 303
>gi|225075410|ref|ZP_03718609.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens
NRL30031/H210]
gi|224953228|gb|EEG34437.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens
NRL30031/H210]
Length = 325
Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEELI 317
>gi|87123876|ref|ZP_01079726.1| Porphobilinogen deaminase [Synechococcus sp. RS9917]
gi|86168445|gb|EAQ69702.1| Porphobilinogen deaminase [Synechococcus sp. RS9917]
Length = 317
Score = 255 bits (650), Expect = 7e-66, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEQAH--PGLPISVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNADHK 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +V+GTSSLRR A L + D RG + TRL KL+ ++LA AG+
Sbjct: 119 LETLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDAGDYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +I+ + GQGA+ IE P EL+KV+ H T ERAFL
Sbjct: 179 RLGFADRIHQIIPSHISLHAVGQGALGIECVEGQPDVLELIKVLEHSPTASRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + L G+V + DGK R G A IG+ A ++
Sbjct: 239 RELEGGCQVPIGVNTRIEANELVLTGMVASLDGKRLIRDERRGTVDKAEAIGQLLAADLK 298
Query: 298 FISNKNVF 305
++
Sbjct: 299 SQGAGDIL 306
>gi|319639194|ref|ZP_07993945.1| porphobilinogen deaminase [Neisseria mucosa C102]
gi|317399378|gb|EFV80048.1| porphobilinogen deaminase [Neisseria mucosa C102]
Length = 325
Score = 255 bits (650), Expect = 7e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEELI 317
>gi|284799715|ref|ZP_05984671.2| hydroxymethylbilane synthase [Neisseria subflava NJ9703]
gi|284797316|gb|EFC52663.1| hydroxymethylbilane synthase [Neisseria subflava NJ9703]
Length = 323
Score = 255 bits (650), Expect = 7e-66, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFTLAAISERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAVVGTSSLRREAQLRVRYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEELI 317
>gi|241759313|ref|ZP_04757419.1| hydroxymethylbilane synthase [Neisseria flavescens SK114]
gi|241320449|gb|EER56746.1| hydroxymethylbilane synthase [Neisseria flavescens SK114]
Length = 325
Score = 255 bits (650), Expect = 8e-66, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG
Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEELI 317
>gi|134300009|ref|YP_001113505.1| porphobilinogen deaminase [Desulfotomaculum reducens MI-1]
gi|189028090|sp|A4J6H7|HEM3_DESRM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134052709|gb|ABO50680.1| hydroxymethylbilane synthase [Desulfotomaculum reducens MI-1]
Length = 309
Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 156/305 (51%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +G+R S LAL L + P I + TKGD++ + L +IG K
Sbjct: 1 MKHKITVGSRDSALALWQTRWVVEQLEKQN--PDVTFEITTMKTKGDKMLDVALAKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E ++ EID AVHS KDMPT L +GL I A R++ D IS + L +L
Sbjct: 59 GLFTKELEVAMLQKEIDFAVHSLKDMPTALPEGLIIGAVCKRDNPGDALISKDGRKLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR A LL +R D + RG + TR+ KL + + I+LA AGI R+
Sbjct: 119 PKGARIGTSSLRRCAQLLNYRPDFQLEALRGNLNTRMKKLVSEQLDGIILAAAGITRMGW 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E +I EI+ + P+ GQGAI +E ++P+ L+K I H +T + ER+ L L+
Sbjct: 179 EDMIAEIIPFQVCLPAVGQGAISVECREDDPEILNLLKGIEHTETKAATEAERSLLRYLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + K + L +V DG A+ +G + A+ + +
Sbjct: 239 GGCQVPIGAHSEVKNNRLMLTAVVATLDGTKVIRAQGENEVNKAVELGIEVAEKLMAMGG 298
Query: 302 KNVFN 306
K +
Sbjct: 299 KKILE 303
>gi|309379620|emb|CBX21791.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 326
Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 168/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKLADDG 313
Query: 301 NKNVF 305
+ +
Sbjct: 314 ARELI 318
>gi|123965794|ref|YP_001010875.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515]
gi|158512730|sp|A2BVF7|HEM3_PROM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123200160|gb|ABM71768.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515]
Length = 316
Score = 254 bits (649), Expect = 9e-66, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTKLKLKIASRRSKLAMVQTLWVKEQLEK--NIPNLEVSIESMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119
KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + + +
Sbjct: 59 KGLFTKELEAQMLIGKADIAVHSLKDLPTNLPDGLKLGCITKREDPSDALVVNKKNEIYQ 118
Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L S++GTSSLRR A L ++ D RG + TR+ KL++ + I+LA AG+K
Sbjct: 119 LESLPAGSIVGTSSLRRLAQLRYKFPYLNFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I +I+ E + GQGA+ IE + + +++ V+ + + ER+FL
Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSEDKEVLKIISVLEDKASSQKCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + + G+V + DGK + +GN +G+ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSSIQNDEICLKGMVASIDGKKLIKDESSGNVKYPEEVGKKLAEKLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 LQGADKIL 306
>gi|86604967|ref|YP_473730.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab]
gi|86553509|gb|ABC98467.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab]
Length = 310
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 156/303 (51%), Gaps = 5/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LALA + L H P + + LST+GD I + L +IG KGLFT
Sbjct: 1 MRIASRKSELALAQTYWVMGQLQAHH--PGLPLELHTLSTQGDIILDVALAKIGDKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122
+E+E L++G D AVHS KD+PT+L +GL + A RED D + L L
Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITQREDPLDALVLREELRGYQLATLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L + + RG + TRL KL+ + ++LA AG+KRL +E
Sbjct: 119 AGTVIGTSSLRRLAQLRHAFPHLQFKNVRGNLNTRLAKLDRGEYDGLILAVAGLKRLGQE 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G
Sbjct: 179 QRIHEVLDPSVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + +G L+ G+V +G+ ++ G+ D +G A+ ++
Sbjct: 239 GCQVPIGVHSQVQGEELHLTGMVADLEGRQLIRDTQTGSTADPEAVGMALAEKLKRQGAD 298
Query: 303 NVF 305
+
Sbjct: 299 EIL 301
>gi|288957245|ref|YP_003447586.1| hydroxymethylbilane synthase [Azospirillum sp. B510]
gi|288909553|dbj|BAI71042.1| hydroxymethylbilane synthase [Azospirillum sp. B510]
Length = 312
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 134/307 (43%), Positives = 175/307 (57%), Gaps = 2/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M P RIGTR SPLALA A ETR L+ H P I I+ T GDRI +RTL E
Sbjct: 1 MTTHPLRIGTRGSPLALAQAHETRDRLIAAHPHLAAPGAIEIVVFKTTGDRILDRTLAEA 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L G D AVHS KD+PT+L GL+I+ LPRED RD F S + L
Sbjct: 61 GGKGLFTKELEEALFDGRADLAVHSMKDVPTQLPDGLEIATLLPREDPRDAFFSRSGGGL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL +V+GT+ LRR+A +L R D+ + RG ++TRL+KL+ + A LLA AG++R
Sbjct: 121 ADLPAGAVVGTAGLRRQAQVLELRPDLRIFPLRGNVQTRLSKLDAGEVDATLLALAGLRR 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I +L E P+ QGAI IE + + L+ +N +T V ERA LA
Sbjct: 181 LGLTGRISAVLEPETMLPAVAQGAIGIEIRSADDATRALLAPLNCAETMVRVTAERALLA 240
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDGSC++ IA A G L+ VL+ DG+ R G +A ++G DA IR
Sbjct: 241 ALDGSCRTPIAALALLDGDALHLRAKVLSCDGRSIFRAERRGKAANAESLGADAGAEIRA 300
Query: 299 ISNKNVF 305
+ F
Sbjct: 301 QLPPDFF 307
>gi|269215203|ref|ZP_05987933.2| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970]
gi|269208048|gb|EEZ74503.1| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970]
Length = 326
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKLADDG 313
Query: 301 NKNVF 305
+ +
Sbjct: 314 ARELI 318
>gi|33861052|ref|NP_892613.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|39931394|sp|Q7V2I1|HEM3_PROMP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33639784|emb|CAE18954.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 316
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG
Sbjct: 1 MTKFKLKIASRRSKLAMVQTLWVKEQLEK--NIPDLEVSIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119
KGLFT+E+E +++ G D AVHS KD+PT L GL + RED D + + +
Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPDGLTLGCITKREDPSDALVVNKKNKIYQ 118
Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L S++GTSSLRR A L + D RG + TR+ KL++ + I+LA AG+K
Sbjct: 119 LESLPPGSIVGTSSLRRLAQLRYKFPHLDFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E + +I+ E + GQGA+ IE ++ + +++ V+ + + ER+FL
Sbjct: 179 RLGFESRVHQIIPNEISLHAVGQGALGIECKSDDKEVLKIISVLEDKVSSQRCLAERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + + + G+V + DGK + GN +G+ A+ ++
Sbjct: 239 RELEGGCQVPIGVNSSIQNDEIALIGMVASIDGKRLIKNESIGNIKYPEEVGKKLAEKLK 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 LQGADKIL 306
>gi|94676875|ref|YP_588539.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123384158|sp|Q1LU25|HEM3_BAUCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94220025|gb|ABF14184.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 311
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 99/305 (32%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +I TR SPLA+ A R+ L+ + P I ++P+ T GD I ++ L + GG
Sbjct: 1 MLNNILKIATRQSPLAIWQANYVRNQLLSFY--PTLLIELVPIVTSGDLILDKPLMKAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +E+E+ ++ D AVHS KD+ +G+ ++ RED RD FIS S+
Sbjct: 59 KRLFIKELEQAMLERRADIAVHSMKDITISFPEGIGLAVLCAREDPRDAFISTHYASIDL 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSS+RR+ L R D+ + D RG I TRL KL+ + A++LA AG+KRL
Sbjct: 119 LPTGAVVGTSSMRRQCQLRERRPDLVMRDLRGNIGTRLEKLDKGEYDALILAAAGLKRLD 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ I++ + P+ GQG I IE + + ++ ++H T V+ ERA A+L
Sbjct: 179 LAHRIRMIIDPTELLPAVGQGVIGIEYRLEDTHILSILAPLHHSATALRVSAERAMNAKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I +A +G ++ +V + DG + A +G+ A + +
Sbjct: 239 AGGCQVPIGSYAEIEGDQIWLRALVGSPDGSLIIRSEGRAPLSQAEILGQSIANDLLYRG 298
Query: 301 NKNVF 305
+++
Sbjct: 299 AESIL 303
>gi|253991598|ref|YP_003042954.1| porphobilinogen deaminase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783048|emb|CAQ86213.1| porphobilinogen deaminase [Photorhabdus asymbiotica]
Length = 313
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L + P + ++P+ T+GD I + L ++GG
Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQFY--PDLEVQLVPMVTQGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL +
Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSAKYHSLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+++ D RG + TRL+KL+N AI+LA AG+KRL+
Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLTIRDLRGNVGTRLSKLDNGHYDAIILAVAGLKRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ L+ + P+ GQGA+ IE +++ + + L+ +NH DT V ER L
Sbjct: 179 LHDRIRTPLSAKQLLPAVGQGAVGIECRLDDQQTRALLAPLNHYDTEICVLAERTMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I +A + ++ +V A DG + R DA G + A+ +
Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTVLPKDACQAGLELAEELLERG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AREIL 303
>gi|224826001|ref|ZP_03699104.1| porphobilinogen deaminase [Lutiella nitroferrum 2002]
gi|224601638|gb|EEG07818.1| porphobilinogen deaminase [Lutiella nitroferrum 2002]
Length = 311
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 108/301 (35%), Positives = 166/301 (55%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF
Sbjct: 3 KIVIASRESKLAMWQAEHIKARLEQLY--PQLAVEILGMTTQGDQILDKTLSKIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A RED RD F+S+T SL +L
Sbjct: 61 VKELELALQEGRADLAVHSIKDVPMNLPEGFALAAICEREDPRDAFVSNTYASLSELPDG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR++ L +++ RG ++TRL KL++ + AI+LA AG+KRL+
Sbjct: 121 AVVGTSSLRRESQLRARFPRLTIKPLRGNVQTRLRKLDDGEFDAIILAAAGLKRLELSAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L + P+ GQGA+ IE + +L+ ++H DT V+ ERA L GSC
Sbjct: 181 IRCELAPSESLPAVGQGALGIEIRADRADLMQLLAPLDHADTHACVSAERALSRVLGGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + GFA + G V DG + S + R A +GR AQ + +
Sbjct: 241 QIPLGGFATLSDDVITLGGFVAHPDGSVMLTASASAPREYADALGRAVAQKLLDAGAAPL 300
Query: 305 F 305
Sbjct: 301 I 301
>gi|318041172|ref|ZP_07973128.1| porphobilinogen deaminase [Synechococcus sp. CB0101]
Length = 317
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 105/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H+ I I ++T+GD+I + L +IG
Sbjct: 1 MAASQLRIASRRSQLAMVQTHWVRDELAKAHE--GLEITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDTAVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DG+ G++ D IG A +R
Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGQRLIRDEARGDQKDPEAIGIALAHALR 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 AQGAGEILE 307
>gi|251773212|gb|EES53764.1| porphobilinogen deaminase [Leptospirillum ferrodiazotrophum]
Length = 321
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 160/302 (52%), Gaps = 4/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LAL A + + + + T GD I + L+++GGKGLF
Sbjct: 9 PIRIGTRGSELALWQARHVAAMIR---HTAGLESELTIIKTTGDMILSVPLSQVGGKGLF 65
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ LI+G ID AVHS KD+P L +GL+I A L RED RD F+S+ S L
Sbjct: 66 VKEIEEALIAGTIDLAVHSMKDVPAFLPEGLEIGAILSREDPRDAFVSNAYSSFSSLPPG 125
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSSLRR A L + R D+ RG + TRL KL+ N+ AI+LA AG+ RL
Sbjct: 126 ARIGTSSLRRMAQLKKRRPDLRFESLRGNVGTRLRKLDENQIDAIILAAAGLIRLGFSDR 185
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+E L +E P+ GQGA+ +E + + + ++ ++ +T V ER L+ LDG C
Sbjct: 186 IREYLPVELSLPAVGQGALGLECRTGDHRIRTILARMHDPETTACVLAERGVLSALDGGC 245
Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ IA A + +L +G E +G +A +G +AAQ + +
Sbjct: 246 QLPIAAHARTISPEQIELIARILDVEGTTLLEEHTSGPAKEAHRLGVEAAQKLLSRGGQK 305
Query: 304 VF 305
+
Sbjct: 306 IL 307
>gi|212633296|ref|YP_002309821.1| porphobilinogen deaminase [Shewanella piezotolerans WP3]
gi|212554780|gb|ACJ27234.1| Porphobilinogen deaminase [Shewanella piezotolerans WP3]
Length = 294
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 104/290 (35%), Positives = 161/290 (55%), Gaps = 2/290 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L +H+ + ++P+STKGD I + L ++GGKGLF +E+E ++
Sbjct: 1 MWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P +GL + RED RD F+S+ S+ +L +V+GTSSLRR+
Sbjct: 59 ADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNFSSINELPQGAVVGTSSLRRQC 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+ R D+ + D RG + TRL KL+ AI+LA AG+KRLK E+ I ++ ED P
Sbjct: 119 QIRAARPDLQIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERITSFISAEDSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE ++ + + L+ + H +T V ERA L+G C+ I +A G
Sbjct: 179 ANGQGAVGIECRTDDARVKALLAPLEHLETRQRVIAERAMNTRLEGGCQVPIGAYAEIDG 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
TL G+V DG E + +GN+ DA +G A+ + K + +
Sbjct: 239 DTLSLRGLVGNPDGSQVIEAATSGNKNDAEQLGVALAEELLSKGAKTILD 288
>gi|188996629|ref|YP_001930880.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931696|gb|ACD66326.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 310
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 176/306 (57%), Gaps = 8/306 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A L ++H + ++ ++T+GD+I + L +IGGKGLF
Sbjct: 2 KIRIGTRKSQLALWQANYIADRLREIH---GIEVELVKITTQGDKILDVPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S +++ L +
Sbjct: 59 VKEIEDALLRNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIRYENIYQLPEN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL +
Sbjct: 119 TVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C
Sbjct: 179 VKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----NGNRCDAINIGRDAAQYIRFI 299
+ + + K ++ G + +GK +++ + AI +G+ A+ +
Sbjct: 239 QVPLGAYCEIKENSFIITGFIADLEGKEYYQEKMIEQIKENPQEQAIILGKTLAEKLLND 298
Query: 300 SNKNVF 305
K +
Sbjct: 299 GGKQIL 304
>gi|297583719|ref|YP_003699499.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10]
gi|297142176|gb|ADH98933.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10]
Length = 312
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 110/308 (35%), Positives = 175/308 (56%), Gaps = 7/308 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +G+R S LA+ S L + P I ++T+GD I + TL+++GG
Sbjct: 1 MT-RTITLGSRRSNLAMTQTRWVISELEKLGL--PFQFEIKEITTRGDEILDVTLSKVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ + +GEID AVHS KD+P+ +GL +++ R D RD IS++ ++L +
Sbjct: 58 KGLFVKEIEQAMHNGEIDMAVHSMKDVPSTRSEGLVLASVPKRYDPRDALISNSGKTLME 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR + +L R D+ + RG I+TRL K AI+LA AG++R+
Sbjct: 118 LPAGSIVGTSSLRRGSQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGLERVG 177
Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E ++ E L+ + P+ GQGA+ +E ++ + +EL+ INHE T +V ERAFL
Sbjct: 178 WTEDIVTEFLDPDLCLPAVGQGALGLECREDDYELRELLAHINHEQTAITVAAERAFLRT 237
Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
++G C+ I +A + ++ +V ++DGK + S G D IG + A+ I
Sbjct: 238 VEGGCQVPIGAYATLDEQNQIHLTALVASTDGKQVFKESIIG--EDPEYIGTEVAERILR 295
Query: 299 ISNKNVFN 306
K V +
Sbjct: 296 QGAKGVLD 303
>gi|118602764|ref|YP_903979.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|226740639|sp|A1AX51|HEM3_RUTMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118567703|gb|ABL02508.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 304
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 166/304 (54%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +I TR SPLAL A + L H P ++++ ++TKGD+I N L++IGGK
Sbjct: 1 MNKTLKIATRQSPLALWQAQNVKIRLEKHH--PDLTVILVEMTTKGDQILNSPLSKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E ++ G D AVHS KD+P ++ +G ++ A L RE+ D F+S+ S+ DL
Sbjct: 59 GLFIKELEVSMMKGITDIAVHSMKDVPYEIPQGFKLGAILKRENPFDAFVSNDFSSIDDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ +GT S+RR L R D+ ++D RG + TRL KL+ I+LA AG+ RL
Sbjct: 119 PQNAKVGTCSIRRIVQLKAIRPDLKILDLRGNVNTRLKKLDKGGFDGIILACAGLIRLGF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK+ ++ + P+ GQG + IE N+ + +L+K + +T V+ ERA A L+
Sbjct: 179 ESRIKQQISDQQSLPAVGQGVVGIEIRENDTEILDLIKPLIDVETTYMVSAERAMNARLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C IAGFA + G+V D + + + A +G + A + +
Sbjct: 239 GGCSVPIAGFALIDNEQIMLTGLVGNVDTGVILKEQILSHVSQAEALGVELANKLISLGA 298
Query: 302 KNVF 305
K++
Sbjct: 299 KDIL 302
>gi|269798482|ref|YP_003312382.1| porphobilinogen deaminase [Veillonella parvula DSM 2008]
gi|282849932|ref|ZP_06259315.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745]
gi|269095111|gb|ACZ25102.1| porphobilinogen deaminase [Veillonella parvula DSM 2008]
gi|282580369|gb|EFB85769.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745]
Length = 312
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 169/301 (56%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT
Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E+ + +G+ID AVHS KDMPT+L +GL + A RE D +S ++L L +
Sbjct: 63 AELEEAMHAGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL E I
Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLEDQI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + +++ IN E T +V ER+FL +L+G C+
Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLDMLDPINDEATRYAVEGERSFLRQLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ L ++ + DGK +E +G +G++ A+ + K +
Sbjct: 243 VPMGVHGTINKGQLTLKAMIASLDGKTVYEGEISGPAKKGEILGKNLAKALYEEGGKRIV 302
Query: 306 N 306
+
Sbjct: 303 D 303
>gi|16330297|ref|NP_441025.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803]
gi|2495177|sp|P73660|HEM3_SYNY3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|1652786|dbj|BAA17705.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803]
Length = 320
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LAL + + L P + + T+GD+I + L +IG KGLF
Sbjct: 9 TVRIGSRKSQLALVQTYWVQEELQK--HFPDRQFDVETMETQGDKILDVALAKIGDKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL--- 121
T+E+E ++ D AVHS KD+PT L GL + R + D + + KDL
Sbjct: 67 TQELEDGMLGKRTDLAVHSLKDLPTNLPAGLMLGCVTKRVNPADALVLNAKHQGKDLASL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A L ++ D RG + TRL KL++N+ AI+LA AG++RL
Sbjct: 127 PEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDSNEYDAIILAAAGLERLDM 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I +++ E + GQGA+ IE + + L+KV+ E++ D ERAFL +L+
Sbjct: 187 ANRIDQLIPPEISLHAVGQGALGIECREGDQEILSLLKVLEDENSRDRCLAERAFLRQLE 246
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I + G L G+V + DG+ + + + R +A +G+D A +R
Sbjct: 247 GGCQVPIGVNTHLDGDNLTLTGMVASLDGQRLIKDTLSAPRKEAEKLGQDLALKLREQGA 306
Query: 302 KNVF 305
+
Sbjct: 307 GEIL 310
>gi|225023639|ref|ZP_03712831.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC
23834]
gi|224943521|gb|EEG24730.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC
23834]
Length = 312
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M I +R S LA+ A +S L ++ P + I+ L+T+GDRI ++TL++IGG
Sbjct: 1 MIPHKLVIASRESALAMWQAEHIQSRLRTLY--PGCEVSILGLTTQGDRILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A RE D F+S+ Q L+D
Sbjct: 59 KGLFVKELEQALSDGRADLAVHSIKDVPMVLPEGFALAAICERESPFDAFVSNNYQRLED 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 119 LPAGAVVGTSSLRREAQLRARFPQLQVAPLRGNVQTRLAKLDQGDYAAIILAEAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ D P+ GQGA+ IE + + L+ +NH T V ERA L
Sbjct: 179 LTQRIRHTLSPADSLPAAGQGALGIEIAAHRSELLPLLAPLNHAQTAACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L +G+V DG + R A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTKQDGLLTLHGLVGHPDGSVILREEAQAPREYADALGRAVAKKLADNG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AQELI 303
>gi|240112249|ref|ZP_04726739.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
gi|268598310|ref|ZP_06132477.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
gi|268582441|gb|EEZ47117.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11]
Length = 311
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AQELI 303
>gi|296136292|ref|YP_003643534.1| porphobilinogen deaminase [Thiomonas intermedia K12]
gi|294340528|emb|CAZ88912.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Thiomonas sp.
3As]
gi|295796414|gb|ADG31204.1| porphobilinogen deaminase [Thiomonas intermedia K12]
Length = 317
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 160/303 (52%), Gaps = 5/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A R L ++ P ++ I ++T+GD+I +++L +IGGKGLF
Sbjct: 11 LVIATRESRLALWQAEHVRDLLKGLY--PQCDVRIFGMTTQGDQILDKSLAKIGGKGLFV 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + G D AVHS KD+P L G ++A + RED RD ++S +L DL +
Sbjct: 69 KELEVAMEQGHADLAVHSLKDVPMVLPTGFALTAVMEREDPRDAWVSPHYANLADLPAGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L + V RG ++TRL KL+ + ILLA AG+KRL + +
Sbjct: 129 VVGTSSLRRESQLRARYPHLKVQALRGNLDTRLRKLDEGQYAGILLAAAGLKRLGLGERV 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ ED P+ GQ A+ IE + P + + +NH T + ERA L GSC
Sbjct: 189 RAVIEPEDMLPAVGQAALGIEIRADRPDLAQALAALNHPPTALCTHAERAVSRGLGGSCT 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302
+ + +A +G ++ ++ DG + G + A +G+ A+ +R
Sbjct: 249 TPMGAYATLEGEAMHLRAVLGLPDGSQALHAQQRGRVTDLAQAEALGQQVARQLREQGAD 308
Query: 303 NVF 305
+
Sbjct: 309 ALL 311
>gi|237756363|ref|ZP_04584911.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691477|gb|EEP60537.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 310
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 174/306 (56%), Gaps = 8/306 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A L ++H + ++ ++T+GD+I + L +IGGKGLF
Sbjct: 2 KIRIGTRKSQLALWQANYIADRLREIH---GVEVELVKITTQGDKILDVPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S + + L +
Sbjct: 59 VKEIEDALLKNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIKHEHIYQLPEN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL +
Sbjct: 119 AVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDGK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C
Sbjct: 179 VKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR-----CDAINIGRDAAQYIRFI 299
+ + + K ++ G + +G+ +++ AI +G+ A+ +
Sbjct: 239 QVPLGAYCEIKENSFIITGFIADLEGREYYQEKITEQIKENTQEQAIILGKTLAEKLLND 298
Query: 300 SNKNVF 305
K +
Sbjct: 299 GGKQIL 304
>gi|83590097|ref|YP_430106.1| porphobilinogen deaminase [Moorella thermoacetica ATCC 39073]
gi|123766782|sp|Q2RJ26|HEM3_MOOTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83573011|gb|ABC19563.1| hydroxymethylbilane synthase [Moorella thermoacetica ATCC 39073]
Length = 313
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 116/300 (38%), Positives = 164/300 (54%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LA A +L P + ++ L TKGD+I + L IG KGLFT
Sbjct: 4 IKVGSRESELARWQARWVIQALEKA--WPGLSCRLVTLKTKGDKILDVALARIGDKGLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G ID AVHS KDMPT L +GL I A PRED DV +S +L L + +
Sbjct: 62 KELELALLDGAIDLAVHSMKDMPTTLPEGLVIGAIGPREDPADVLVSPEGYTLATLPIKA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRKA L R D+ ++D RG + TRL K+ + AI+LA AG+KRL +V+
Sbjct: 122 RVGTSSLRRKAQLAYARPDLELVDLRGNVPTRLAKMERDGLTAIVLAAAGLKRLNHGQVL 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E + P+ GQGAI +E + + ELV INH T +V ERA+L L+G C+
Sbjct: 182 GEPIPYHICLPAVGQGAIGVEIRAGDRRVAELVAAINHPPTAAAVRAERAYLRALEGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA A + + L G+V + DG+ +G+ D GR+ A+ + +
Sbjct: 242 VPIAALATVEDTALVLQGMVASLDGREMLRDIASGSTRDPEAAGRELARKLLARGAGEIL 301
>gi|283851270|ref|ZP_06368553.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B]
gi|283573439|gb|EFC21416.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B]
Length = 310
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ I TR S LAL A + L + + P + ++P+ TKGD+I + L ++GGK
Sbjct: 1 MREKLVIATRSSKLALWQANHVSARLRETY--PGLVVDLLPIKTKGDKILDVPLAKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+ G D AVHS KD+P + +GL + RED D +S L
Sbjct: 59 GLFVKEIEEALLDGRADLAVHSMKDVPAEQPQGLVVGIVPEREDPCDTLLSVAYAGFAAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRRKA L+ R D+S+ID RG ++TR+ KL + AI++A AG+ RL
Sbjct: 119 PAGARVGTSSLRRKAQLMALRPDLSIIDLRGNLDTRVGKLLDGLFDAIVVATAGLNRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
L +F P+ QGA+ +E ++P+ ++ +H ++ D+V ER FLA L+
Sbjct: 179 TAPQAVRLGPPEFLPAAAQGALGLEYRTDDPETAAMLAFFDHPESRDAVAAERGFLARLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IA A G L G+V + + G R +A +G+ A+ + +
Sbjct: 239 GGCQVPIAAHATIDGDALALDGLVADPETGQTFRGNVTGKRSEARALGQGLAESVLAMGA 298
Query: 302 KNVFN 306
K V
Sbjct: 299 KAVLE 303
>gi|296314908|ref|ZP_06864849.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768]
gi|296838093|gb|EFH22031.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768]
Length = 311
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L
Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 ARELI 303
>gi|155967344|gb|ABU41508.1| HemC [Heliophilum fasciatum]
Length = 315
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P IGTR S LAL L + P I + TKGD+I + L +IG KG
Sbjct: 5 NRPIVIGTRDSALALWQTHWVLEQLQA--RFPEQRFEIKAIKTKGDKILDVALAKIGDKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GE+D AVHS KD+PT+L +GL + A RED RDV I TA++L +L
Sbjct: 63 LFTKELEVAMLEGEVDMAVHSLKDLPTQLPEGLTVGAMCIREDYRDVLIGRTARTLAELK 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRK+ + + R D+ ++D RG ++TR+ K+ I+LA AG+ RL
Sbjct: 123 PGARVGTASLRRKSQIWKVRPDLELLDIRGNLQTRMRKMEEQDLDGIILAAAGVLRLGWA 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + ++ + P+ GQG++ IE + +V +NH+DT D + ERA + L+G
Sbjct: 183 DKITQYIDEDVCLPAVGQGSVGIEIRDGDEAIARVVGALNHKDTADCITAERALMRTLEG 242
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I + +L +G+V + DG+ G+R +A ++G A +
Sbjct: 243 GCQVPIGALGKLGEDDSLTLHGVVASLDGREICRDQVTGHRSEAADLGHRLADILIAKGA 302
Query: 302 KNVF 305
+
Sbjct: 303 AEIL 306
>gi|294670387|ref|ZP_06735269.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307851|gb|EFE49094.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 312
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 169/306 (55%), Gaps = 3/306 (0%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL++IG
Sbjct: 1 MNTPKKLVIASRESMLAMWQAEHIKGRLKALY--PDCEVEILGMTTRGDQILDRTLSKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ L+
Sbjct: 59 GKGLFIKELEQALQDGRADLAVHSIKDVPMELPEGFALAAIGERASPFDAFVSNQYARLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
++ +++GTSSLRR+A L +++ RG ++TRL+KL+N A++LA AG++RL
Sbjct: 119 EMPEGAIVGTSSLRREAQLRAKFPHLTIQPLRGNVQTRLSKLDNGDYDAVILAAAGLQRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I+EIL+ D P+ GQGA+ IE ++++ +NHE+T V ERA
Sbjct: 179 GLDSRIREILSPADSLPAAGQGALGIEIAARRTDLADILRPLNHEETAACVTAERALARA 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ +A + + L G+V DG + E S A +GR A+ +
Sbjct: 239 LGGSCQVPLAAYCVMEDGLLTLNGLVGHPDGSVIIEASAQAPDAYANALGRAVAKRLADD 298
Query: 300 SNKNVF 305
+ +
Sbjct: 299 GAEELI 304
>gi|88770654|gb|ABD51930.1| chloroplast hydroxymethylbilane synthase [Guillardia theta]
Length = 346
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 125/310 (40%), Positives = 187/310 (60%), Gaps = 5/310 (1%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVH----KIPPHNIVIIPLSTKGDRITNRTL 55
M +P ++GTR SPLALA A+ETR L ++ + I ++T GD ++ L
Sbjct: 13 MSGEPVIKLGTRGSPLALAQAYETRRRLAELFPEELGEKGEKVSINIINTSGDMELSKAL 72
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
+EIGGKGLFT+E++ L+ E+D VHS KD+PT L G + A LPRED RD FIS
Sbjct: 73 SEIGGKGLFTKELDVALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISPKY 132
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
QS +++ +VIG++SLRR+A + I ++FRG ++TRL KL++ A LLA AG
Sbjct: 133 QSFEEMPEGTVIGSASLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLALAG 192
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KR+ + ++L+ ++ P+ QGAI I+ ++ K + + +NH+DT V+CER+
Sbjct: 193 LKRMNMADCVTKVLDWDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCERS 252
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
FLA LDGSCK+ IAG A ++F G+V + DG R G+ D + IG+DA +
Sbjct: 253 FLATLDGSCKTPIAGQARIIDGKIHFRGLVASPDGSKIFRAERVGDVSDYMKIGKDAGEE 312
Query: 296 IRFISNKNVF 305
IR + + F
Sbjct: 313 IRKEAGEQFF 322
>gi|294676723|ref|YP_003577338.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003]
gi|12280937|gb|AAG50298.1| porphobilinogen deaminase [Rhodobacter capsulatus]
gi|294475543|gb|ADE84931.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003]
Length = 317
Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 126/307 (41%), Positives = 179/307 (58%), Gaps = 4/307 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA AFETRS LM +P I+ + T GD ++ L E+GG
Sbjct: 10 PLKIGTRGSPLALAQAFETRSRLMAAFDLPEEAFEIVVIKTSGDNAALIAADKPLKEVGG 69
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++G ID AVHS KDMPT +GL + YLPRED RD F+S SL +
Sbjct: 70 KGLFTKEIEEAMLAGSIDIAVHSMKDMPTLQPEGLILDCYLPREDTRDAFVSMKYNSLAE 129
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A L R D+ +++FRG ++TR+ KL A A LA AG+ RL
Sbjct: 130 LPEGAVVGTSSLRRRAQLAARRPDLKMVEFRGNVQTRMKKLGEGVADATFLALAGLNRLG 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+V K + ED P+ QG I IE + +A+ L+ I+H + + CER+FL L
Sbjct: 190 MSEVAKSAIEPEDMLPAVAQGCIGIERREADTRAKMLLDAIHHAPSGLRLACERSFLLTL 249
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ I G + +G ++ G +L DG G D + +G + A+ + +
Sbjct: 250 DGSCETPIGGLSVLEGDQIWLRGEILRPDGSETITGEIRGPAADGVALGAELAKQLLAKA 309
Query: 301 NKNVFNF 307
+ F +
Sbjct: 310 PADFFCW 316
>gi|155241760|gb|ABT18042.1| porphobilinogen deaminase [Heliobacillus mobilis]
Length = 314
Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 107/308 (34%), Positives = 163/308 (52%), Gaps = 5/308 (1%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M ++P IGTR S LAL + L ++ P + + TKGD+I + L +I
Sbjct: 1 MSVLQRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G KGLFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L
Sbjct: 59 GDKGLFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISR-HGGL 117
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ R
Sbjct: 118 DALPQGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIR 177
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I + + ++ P+ GQG+I IE + + ++V +NH +T S+ ERA +
Sbjct: 178 LGWAEKISQYIPVDMCLPAVGQGSIGIEIREGDDEIAKIVGALNHYETSVSIRAERALMR 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I + L GIV + DGK G+ +G A+ +
Sbjct: 238 TLEGGCQVPIGSLGRLQEGRLVLDGIVASLDGKHVARGREEGDPSQPEEVGIRLAEQLLQ 297
Query: 299 ISNKNVFN 306
+ + N
Sbjct: 298 QGAREILN 305
>gi|116072875|ref|ZP_01470140.1| porphobilinogen deaminase [Synechococcus sp. BL107]
gi|116064401|gb|EAU70162.1| porphobilinogen deaminase [Synechococcus sp. BL107]
Length = 317
Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 154/308 (50%), Gaps = 5/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG
Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I + + + + GQGA+ IE N P+ +++KV+ H T ERAFL
Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENKPEVMDIIKVLEHGPTSQRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I +G L G+V + DGK +G D +IG A ++
Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREKASGPSTDPESIGLALATTLK 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 GLGAGEIL 306
>gi|295399407|ref|ZP_06809389.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius
C56-YS93]
gi|312110034|ref|YP_003988350.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1]
gi|294978873|gb|EFG54469.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311215135|gb|ADP73739.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1]
Length = 310
Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 172/306 (56%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P + + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWVIEQLRQLGA--PFEFEVKEIVTKGDKILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE +++ EID AVHS KDMP L GL I PRED RDV IS ++ DL
Sbjct: 59 LFVKEIEHAMLNNEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHRDVLISKNKETFADLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 SGAVVGTSSLRRSAQLLAKRPDLTIKWIRGNIDTRLAKLQTEDYDAIVLAAAGLVRMGWA 178
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI E L + P+ GQGA+ +E ++ + +E ++ +N DT +V ERAFL +L+
Sbjct: 179 SDVITEYLATDVCLPAVGQGALAVECRESDEELREWLQKLNDIDTERAVYAERAFLRQLE 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A+ + + +V + DGK ++ + +G+ D N+G AA +
Sbjct: 239 GGCQVPIAGYAHVNNQNDIVLTALVASPDGKELYKETVSGS--DPENVGTTAADLLIKRG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKALID 302
>gi|288553611|ref|YP_003425546.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4]
gi|288544771|gb|ADC48654.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4]
Length = 310
Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 174/306 (56%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG+R S LAL + L K P+N + + TKGDRI + TL+++GGKG
Sbjct: 1 MRTIVIGSRRSNLALTQTDWVINQLKK--KEVPYNFEVKKIVTKGDRILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L + EID AVHS KD+P+ + +G ++A RED RD FIS LKDL
Sbjct: 59 LFVKEIEQALENKEIDIAVHSMKDVPSVMPEGFSLAAITEREDARDAFISLDHVKLKDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+++GTSSLRR A LL R D+ V RG +ETRL KL AI+LA AG+ RL
Sbjct: 119 SGAIVGTSSLRRSAQLLAERPDLEVKWIRGNVETRLRKLKEEDFSAIILAAAGLNRLGYS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+++ E L E P+ GQGA+ +E ++ + EL++ +N E T +V ER FL +++
Sbjct: 179 EELVTEYLEPEMCVPAVGQGALGLECRSDDQEVIELIQKLNDEATALTVTAERTFLHKME 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DGK + + G D + +G + ++ +
Sbjct: 239 GGCQVPIAGYATMQEDGQVSLTALVGSPDGKTILKDTVVG--QDPVKVGEEVSERLLEKG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKEILD 302
>gi|59800604|ref|YP_207316.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090]
gi|240013461|ref|ZP_04720374.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI18]
gi|240117279|ref|ZP_04731341.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
gi|240120532|ref|ZP_04733494.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID24-1]
gi|254493056|ref|ZP_05106227.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291]
gi|260441191|ref|ZP_05795007.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|268602974|ref|ZP_06137141.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
gi|59717499|gb|AAW88904.1| putative porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090]
gi|226512096|gb|EEH61441.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291]
gi|268587105|gb|EEZ51781.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1]
Length = 311
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AQELI 303
>gi|119503707|ref|ZP_01625789.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080]
gi|119460215|gb|EAW41308.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080]
Length = 302
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 8/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I TR SPLAL A L ++ P + ++ ++++GD++ ++ L ++GG
Sbjct: 1 MSK--LVIATRESPLALWQANYVADRLRALY--PELMVELLGMTSRGDQLLDKPLYKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P L GL + RED RD + +L +
Sbjct: 57 KGLFVKELETALLDGRADIAVHSMKDVPMALPPGLTLGVICEREDPRDALV--GISALSE 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + GTSSLRR + R R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 115 LEQGARFGTSSLRRACQIRRVRPDLEIGFLRGNVNTRLAKLDAGEFDAIILATAGLVRLG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E P+ GQGA+ IE ++ + EL+ +N DT + V ERA + L
Sbjct: 175 FESRIGARIEPEVSLPAGGQGAVGIEYRSDDDRVAELLAPLNDADTAECVTAERAVVRVL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG C IA +A +G+ L+ +V + DG+ E G +A +G++ AQ +
Sbjct: 235 DGGCDVPIASYAVKEGNELWLRALVGSVDGRSVLEAQSRG--ANAEELGQEVAQALLDGG 292
Query: 301 NKNVFN 306
V
Sbjct: 293 AAAVLE 298
>gi|168059289|ref|XP_001781636.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666950|gb|EDQ53592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 134/306 (43%), Positives = 187/306 (61%), Gaps = 4/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGL
Sbjct: 88 VRIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALEIVIIKTTGDKILSQPLADIGGKGL 147
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L
Sbjct: 148 FTKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPE 207
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ LL + V++FRG ++TRL KL+ A LLA AG+KRL +
Sbjct: 208 GSVVGSASLRRQSQLLHKYPHLKVVNFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTE 267
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ IL+ +D P+ QGAI I + K +E + +NHEDT +V CERAFLA+LDGS
Sbjct: 268 HVTTILDTDDMLPAIAQGAIGIACRTGDTKMEEYLSSLNHEDTRLAVACERAFLAKLDGS 327
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFISN 301
C++ IAG A F G+V +DGK E SR G+ D I + +DA Q + +
Sbjct: 328 CRTPIAGLAQRTDDGCSFRGLVATTDGKQVLETSRKGSFFYDDMIALAQDAGQELISRAG 387
Query: 302 KNVFNF 307
+ F +
Sbjct: 388 PDFFEW 393
>gi|298527685|ref|ZP_07015089.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511337|gb|EFI35239.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 313
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 161/303 (53%), Gaps = 2/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A S L + + + ++ + T GD+I + L ++GGKG
Sbjct: 1 MKKVVIATRGSKLALWQAEHISSRLRERYS--GLEVELLKVKTTGDKILDVPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KDMP +L +GL++ RE DV +S + + L
Sbjct: 59 LFVKEIEEALMDGRADIAVHSMKDMPAELPRGLKLGIIPERESRFDVLLSTSYPDISSLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A +L R D+ + RG ++TRL KL AI++A AG+ RL
Sbjct: 119 TGATVGTSSLRRQAQILHMRPDLEIQMLRGNLDTRLRKLKEGIYDAIIVAAAGMSRLNMH 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L+ F P+ GQGA+ IE + + EL+ ++ T + CERAFLAEL+G
Sbjct: 179 ADYVTELSPPYFLPAVGQGALGIEYLQDRQELDELLGFMDDFSTRYCIECERAFLAELEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA + +G+ + G+V G+ S +G DA ++G D A+ + +
Sbjct: 239 GCQVPIACYCRHEGNNIQATGLVCDLKGERMIRKSVSGKPKDARSLGVDMARQVLEAGGR 298
Query: 303 NVF 305
+
Sbjct: 299 EIL 301
>gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040714|gb|ACT57510.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 307
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 307/307 (100%), Positives = 307/307 (100%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG
Sbjct: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD
Sbjct: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK
Sbjct: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL
Sbjct: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS
Sbjct: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
Query: 301 NKNVFNF 307
NKNVFNF
Sbjct: 301 NKNVFNF 307
>gi|194097777|ref|YP_002000818.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945]
gi|239998278|ref|ZP_04718202.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|240015900|ref|ZP_04722440.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA6140]
gi|240080040|ref|ZP_04724583.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
gi|240114994|ref|ZP_04729056.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|240122831|ref|ZP_04735787.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|240125027|ref|ZP_04737913.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|240127540|ref|ZP_04740201.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|268600662|ref|ZP_06134829.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|268681446|ref|ZP_06148308.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|268683614|ref|ZP_06150476.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|268685917|ref|ZP_06152779.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|193933067|gb|ACF28891.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945]
gi|268584793|gb|EEZ49469.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18]
gi|268621730|gb|EEZ54130.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332]
gi|268623898|gb|EEZ56298.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679]
gi|268626201|gb|EEZ58601.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035]
gi|317163558|gb|ADV07099.1| porphobilinogen deaminase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 311
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AQELI 303
>gi|197121772|ref|YP_002133723.1| porphobilinogen deaminase [Anaeromyxobacter sp. K]
gi|220916566|ref|YP_002491870.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196171621|gb|ACG72594.1| porphobilinogen deaminase [Anaeromyxobacter sp. K]
gi|219954420|gb|ACL64804.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 314
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 149/300 (49%), Gaps = 3/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF
Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ + + AVHS KD+P L GL ++A RED RD S ++L L +
Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLAAVPQREDPRDALCSPRWKTLAALPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL +
Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEMVRGNVETRLRKASEGL-DAVVLAYAGLRRLGLAEHA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ E+ P+ QGA+ +E ++ + + DT + ER FLA ++G C+
Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLARLAALEDPDTRVRIEAERGFLARIEGGCQ 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAG A G + +V + DG R G +A +G A + +
Sbjct: 239 VPIAGHATLAGGKVTIRALVASLDGARVIRGERTGAYAEARAMGESLADELLSRGADQIL 298
>gi|115444475|ref|NP_001046017.1| Os02g0168800 [Oryza sativa Japonica Group]
gi|75259105|sp|Q6H6D2|HEM3_ORYSJ RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|49388602|dbj|BAD25717.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group]
gi|113535548|dbj|BAF07931.1| Os02g0168800 [Oryza sativa Japonica Group]
gi|222622259|gb|EEE56391.1| hypothetical protein OsJ_05540 [Oryza sativa Japonica Group]
Length = 358
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 126/306 (41%), Positives = 180/306 (58%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL
Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+
Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--AINIGRDAAQYIRFIS 300
C++ IA +A K F G++ + DG +E SR G + +G+DA ++ +
Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKA 349
Query: 301 NKNVFN 306
F+
Sbjct: 350 GPGFFD 355
>gi|313623622|gb|EFR93785.1| porphobilinogen deaminase [Listeria innocua FSL J1-023]
Length = 309
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 117/307 (38%), Positives = 165/307 (53%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL
Sbjct: 59 GLFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PKGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 EKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E ++ E P+ GQGA+ IE + + ++ I+HE+T V ER FL
Sbjct: 179 LENPSLKLEDISPELCLPAVGQGALAIECRETDLQICNMLASIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA G +++F G+V +DG I E R G IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG--ASPAEIGNQVAEELLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|291044525|ref|ZP_06570234.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|293397661|ref|ZP_06641867.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62]
gi|291011419|gb|EFE03415.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2]
gi|291611607|gb|EFF40676.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62]
Length = 313
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 300
Query: 301 NKNVF 305
+ +
Sbjct: 301 AQELI 305
>gi|284929513|ref|YP_003422035.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A]
gi|284809957|gb|ADB95654.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A]
Length = 318
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 104/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIG+R S LAL + + L + P + I +ST+GD I + L +IG K
Sbjct: 4 SNRLIRIGSRKSQLALVQTYWIQEQLQKHY--PNYEFQIETMSTQGDNILDVALAKIGDK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E ++ ID AVHS KD+PT L +GL + RE+ D + + L
Sbjct: 62 GLFTKELEVAMLQNRIDFAVHSLKDLPTNLPEGLMLGCITERENPADALVVNEKYKNNKL 121
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
S+IGTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR
Sbjct: 122 DTLPEGSIIGTSSLRRLAQLRHHYPYLIFKDVRGNVNTRLAKLDAGEYDAIILAAAGLKR 181
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I +I+ + + GQGA+ IE + + EL++V+ H +T ER+FL
Sbjct: 182 LNMDNRIHQIIPEDISLHAVGQGALGIECRAADSRILELLEVLKHSETHYRCMGERSFLR 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I + + L GIV + DGK + + +G+ A N+G + + +R
Sbjct: 242 ALEGGCQVPIGVTTKIECNILTLTGIVASLDGKTMLKNTVSGHMEQAENLGYELSVCLRD 301
Query: 299 ISNKNVFN 306
+ +
Sbjct: 302 AGATEILD 309
>gi|260893122|ref|YP_003239219.1| porphobilinogen deaminase [Ammonifex degensii KC4]
gi|260865263|gb|ACX52369.1| porphobilinogen deaminase [Ammonifex degensii KC4]
Length = 308
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 3/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ RIGTR S LALA + L + + P + I+ + T GD++ N L IGGK
Sbjct: 4 SKRCLRIGTRGSDLALAQTEQVLQILRE--RWPHYTYEIVKIKTTGDKVRNLALPRIGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E L+ +ID AVHS KD+PT+L + L + A LPRE DV IS T L+DL
Sbjct: 62 GLFTKELEVALLEEKIDLAVHSLKDLPTELPEELCVGAVLPREHPGDVLISLTGAGLEDL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+A L R D++ + RG + TRL KL + A++LA+AG++RL+
Sbjct: 122 PEGARIGTSSLRRQAQLKAARPDLNFVPLRGNVPTRLRKLEKGECEAVVLAWAGLRRLRL 181
Query: 182 EKVIKEILNIEDFP-PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + L P+ QGAI +E + + +++V+V++ T V ERAFL L
Sbjct: 182 DLTGRMTLLPYQVCLPAVAQGAIGVEMRKEDRELRKMVEVLDDPTTRLEVTAERAFLRWL 241
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C IA A G+ + G+V +GK +G+ +G A+ +
Sbjct: 242 GGGCHVPIAALARVAGAEILLEGLVADPEGKRIVRGQESGSTAYPEEVGIRLAERLLREG 301
Query: 301 NKNVF 305
+ +
Sbjct: 302 AEELL 306
>gi|297183175|gb|ADI19316.1| porphobilinogen deaminase [uncultured delta proteobacterium
HF0500_03A04]
Length = 315
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 4/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A +S + H P + ++ + TKGDRI +R L+++GGKGLF
Sbjct: 5 LRIATRGSRLALWQANWVKSQIEQNH--PGQTVELVIVQTKGDRIQDRPLSQVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L D AVHS KD+ ++ +GL + RED RD ++ S +L +
Sbjct: 63 KELEGSLFREAADLAVHSLKDVTGEVPEGLALPVVTAREDFRDALVAPRHGSFCELPSGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR A LL R D+ RG +ETRLNK+++ A LLA AG+KRL+ E I
Sbjct: 123 VVGTSSLRRAAQLLHLRPDLETQPIRGNVETRLNKVDSGAFDATLLAVAGLKRLELELRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ E P+ GQG + +E ++P EL++ + + T ER L L+G+C+
Sbjct: 183 TEVFPPEMLLPALGQGVLGLEIRADDPATLELIQPLQDKTTALCCQAERRLLERLEGNCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--GNRCDAINIGRDAAQYIRFISNKN 303
+AG G L G +LA DG+ E A +G + A I +
Sbjct: 243 VPLAGLCERCGERLLLRGQLLAPDGQQVVEHKAESAATPEAARALGDEVANAILNSGGRE 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|307103191|gb|EFN51453.1| hypothetical protein CHLNCDRAFT_33052 [Chlorella variabilis]
Length = 361
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 131/311 (42%), Positives = 189/311 (60%), Gaps = 6/311 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60
K +IGTR SPLALA A+ TR L + II + T GD+I N+ L++IGG
Sbjct: 51 TKTLKIGTRGSPLALAQAYLTRDLLKSTFPELNEEGALEIIIIKTTGDKILNQPLSDIGG 110
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EI+ L+ G ID AVHS KD+PT L G + LPRED+RDVFIS +S+ +
Sbjct: 111 KGLFTKEIDDALLDGRIDIAVHSMKDVPTYLPAGTVLPCNLPREDVRDVFISAKYKSIAE 170
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G++SLRR+A +L + V++FRG ++TRL KL A LLA AG+KRL
Sbjct: 171 LPEGAVVGSASLRRQAQILAKYPTLQVVNFRGNVQTRLRKLQEGACDATLLALAGLKRLG 230
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
IL+ ++ P+ QGAI I + ++ + +NHE+T ++ CERAFLA L
Sbjct: 231 LADKATSILSTDEMLPAVAQGAIGIACREGDDRSAAALAALNHEETRLAIVCERAFLAAL 290
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRF 298
DGSC++ IAG+A+ L F G+V DGK +E +R G+ +A IG+DA ++
Sbjct: 291 DGSCRTPIAGWAHKADGQLAFRGLVSTPDGKKMYETTRTGSLTEDEARAIGQDAGTELKQ 350
Query: 299 ISNKN--VFNF 307
+ ++ VF++
Sbjct: 351 QAQQDGTVFDW 361
>gi|113868875|ref|YP_727364.1| porphobilinogen deaminase [Ralstonia eutropha H16]
gi|113527651|emb|CAJ93996.1| porphobilinogen deaminase [Ralstonia eutropha H16]
Length = 337
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 170/305 (55%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 19 QKLVIASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + G D AVHS KD+P +L +G ++A + RED RD +S SL ++
Sbjct: 77 FVKELEFAMDEGRADLAVHSLKDVPMELPEGFALTAVMEREDPRDALVSSAYASLDEMPA 136
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 137 GTVVGTSSLRREAALRSRYPQLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGE 196
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ ++ I+ P+ GQGA+ IE N P+ + + +NH+ T +V+ ERA L GS
Sbjct: 197 RIRALIPIDVSLPAAGQGALGIEILANRPELAQWLAPLNHQPTALAVSAERAVSRMLGGS 256
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFIS 300
C+ +A A +G L V DG + +G D A +G+ A+ +
Sbjct: 257 CQVPLAAHARWEGDQLKLDAFVALPDGTRAIRAAASGPAVDLAAAEALGQACARDLLAQG 316
Query: 301 NKNVF 305
+ +
Sbjct: 317 AEAIL 321
>gi|33239945|ref|NP_874887.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|39931408|sp|Q7VD89|HEM3_PROMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33237471|gb|AAP99539.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 315
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 5/309 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ + L P +I I ++T+GD+I + L +IG
Sbjct: 1 MALDQVRIASRRSQLAMVQTNWVKEELEKA--CPSIDISIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119
KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + +
Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITKREDPADALVVNKKYKNYQ 118
Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
DL SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LNDLPEGSVVGTSSLRRLAQLRHHYPGLIFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I +++ E + GQGA+ IE + + +++KV+ H+++ ERAFL
Sbjct: 179 RLGFGNRIHQLIPSEISLHAVGQGALGIECVKDKEEILQIIKVLEHKESSLRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL+G C+ I + +G L G+V + DGK ++ G+ IG + A ++
Sbjct: 239 KELEGGCQVPIGVNSKIQGQELILTGMVASLDGKQLIRDTKTGSSMHPETIGIELANTLK 298
Query: 298 FISNKNVFN 306
+
Sbjct: 299 SQGAMEILE 307
>gi|268594132|ref|ZP_06128299.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|268596184|ref|ZP_06130351.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
gi|268547521|gb|EEZ42939.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02]
gi|268549972|gb|EEZ44991.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19]
Length = 313
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG
Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L
Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG I + A +GR A+ +
Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 300
Query: 301 NKNVF 305
+ +
Sbjct: 301 AQELI 305
>gi|218190145|gb|EEC72572.1| hypothetical protein OsI_06012 [Oryza sativa Indica Group]
Length = 358
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 126/306 (41%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL
Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+
Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--AINIGRDAAQYIRFIS 300
C++ IA +A K F G++ + DG +E SR G+ + +G+DA ++ +
Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGSYDFDIMVEMGKDAGHELKAKA 349
Query: 301 NKNVFN 306
F+
Sbjct: 350 GPGFFD 355
>gi|88797646|ref|ZP_01113235.1| porphobilinogen deaminase [Reinekea sp. MED297]
gi|88779818|gb|EAR11004.1| porphobilinogen deaminase [Reinekea sp. MED297]
Length = 313
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 110/313 (35%), Positives = 171/313 (54%), Gaps = 11/313 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A ++ L H P + ++ +STKGD+I + L+++GG
Sbjct: 1 MSQ-IVRIATRKSPLALWQAEFVKAELEKHH--PDLQVELVKISTKGDQILDVALSKVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E + +GE D AVHS KD+P ++ G +++ RE+ D F+S+ S+ D
Sbjct: 58 KGLFIKELEVAMEAGEADMAVHSMKDVPMEMPAGFELATICERENPFDAFVSNDFDSIDD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A +L R D+ V RG + TRL KL++ + AI+LA AG+ RL
Sbjct: 118 LPQGAVLGTSSLRRQAQILAHRPDLDVRFLRGNVGTRLGKLDDGEYQAIVLACAGLIRLD 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++ + P+ GQGA+ IE + +E ++ ++HE+T V+ ERA L
Sbjct: 178 LQARIRQEIPGNLSLPAVGQGAVGIEIRAGDIALKERLQPLSHENTTLRVSAERAMNRVL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR----NGN----RCDAINIGRDA 292
+G C+ IAG+A L G V A DG + S G A ++G
Sbjct: 238 NGGCEVPIAGYAVLDDQVLKLEGRVGAVDGSKLLKSSAEMTLTGPVSQQISQATDLGHMV 297
Query: 293 AQYIRFISNKNVF 305
A+ + + +
Sbjct: 298 ARDLLSQGAQALL 310
>gi|56964395|ref|YP_176126.1| porphobilinogen deaminase [Bacillus clausii KSM-K16]
gi|61213279|sp|Q5WEP5|HEM3_BACSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56910638|dbj|BAD65165.1| porphobilinogen deaminase [Bacillus clausii KSM-K16]
Length = 311
Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 175/306 (57%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IGTR S LAL L + P+ + + TKGDRI + TL+++GGKG
Sbjct: 1 MRKIVIGTRRSKLALTQTNWVIDQLKQLGV--PYEFEVKEIVTKGDRILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L SGEID AVHS KD+P++LL+ ++A RED RDV +S +L +L
Sbjct: 59 LFVKEIEAALRSGEIDVAVHSMKDVPSELLEEFTLAAITEREDPRDVLVSENGHTLDELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+++GTSSLRR A +L R D+ V RG +ETRL KL AI+LA AG+KRL
Sbjct: 119 AGAIVGTSSLRRSAQILHRRPDVQVKWIRGNVETRLRKLKEEDFSAIVLAAAGLKRLGYG 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E VI E L+ + P+ GQGA+ +E V++ + EL+ ++HE+T +V ERAFL E++
Sbjct: 179 EDVITEYLDKDVCLPAIGQGALGLECRVDDVETTELLAKLHHEETGKAVLAERAFLKEMN 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ I G+A + ++ G+V + DGK + + G D +G++ + +
Sbjct: 239 GGCQVPIGGYATVLEDGAVFLTGLVGSPDGKTILKEGKCGMVAD--ELGKEVSSLLTAQG 296
Query: 301 NKNVFN 306
+
Sbjct: 297 AGAILE 302
>gi|15617181|ref|NP_240394.1| porphobilinogen deaminase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681931|ref|YP_002468317.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682486|ref|YP_002468870.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471641|ref|ZP_05635640.1| porphobilinogen deaminase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11386824|sp|P57651|HEM3_BUCAI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800236|sp|B8D8F3|HEM3_BUCA5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800237|sp|B8D8B0|HEM3_BUCAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|25292183|pir||H84998 hydroxymethylbilane synthase (EC 4.3.1.8) [imported] - Buchnera sp.
(strain APS)
gi|10039246|dbj|BAB13280.1| porphobilinogen deaminase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622219|gb|ACL30375.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624774|gb|ACL30929.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086313|gb|ADP66395.1| porphobilinogen deaminase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086887|gb|ADP66968.1| porphobilinogen deaminase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087477|gb|ADP67557.1| porphobilinogen deaminase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087959|gb|ADP68038.1| porphobilinogen deaminase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 314
Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 175/306 (57%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL + ++ ++ P NI ++P+ T GD I N++L++IGG
Sbjct: 1 MYNKTLRIATRKSPLALKQTKYVQKKILSLY--PDLNIKLVPIVTHGDNILNKSLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ + D A+HS KD+P K+ K L + + R + D +S+ QS+
Sbjct: 59 KGLFIKELELALLENKADIAIHSMKDLPVKITKELCLVSICKRGNALDSLVSNNYQSINQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+ L+ +R D+ + RG IETR+ KL+ K AI+LA G+ RL+
Sbjct: 119 LPKGAIVGTSSLRRQCQLITYRPDLIISPLRGNIETRIAKLDQGKYDAIILATEGLNRLR 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I +I+ E PS GQGAI I++ +++ K + +NH +T+ +N ERAF +L
Sbjct: 179 LKNRITQIIPAELSLPSCGQGAIGIQSRLHDKKVLFFLSRLNHINTFIEINAERAFCRKL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ C+ I +A K + ++ G+V + +GKI + R G +G A +
Sbjct: 239 ESGCQIPIGSYAILKKNKIWLRGLVGSPNGKIILKGERIGCYNTGEKMGYSLADELLKNG 298
Query: 301 NKNVFN 306
KN+ N
Sbjct: 299 AKNILN 304
>gi|116793769|gb|ABK26871.1| unknown [Picea sitchensis]
Length = 373
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 135/307 (43%), Positives = 190/307 (61%), Gaps = 5/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGL
Sbjct: 67 VRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGL 126
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L
Sbjct: 127 FTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQA 186
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL +
Sbjct: 187 GSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQ 246
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGS
Sbjct: 247 HVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGS 306
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300
C++ IAG+A K F G++ + DG E SR G D +++G DA + ++ +
Sbjct: 307 CRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTYEDMVSMGVDAGKELKERA 366
Query: 301 NKNVFNF 307
F++
Sbjct: 367 GPAFFDW 373
>gi|16800659|ref|NP_470927.1| porphobilinogen deaminase [Listeria innocua Clip11262]
gi|23821696|sp|Q92BF8|HEM3_LISIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|16414078|emb|CAC96822.1| hemC [Listeria innocua Clip11262]
gi|313618766|gb|EFR90670.1| porphobilinogen deaminase [Listeria innocua FSL S4-378]
Length = 309
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 117/307 (38%), Positives = 166/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL
Sbjct: 59 GLFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PKGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E ++ E P+ GQGA+ IE + + +++ I+HE+T V ER FL
Sbjct: 179 LENTSLKLEDISPELCLPAVGQGALAIECRETDLQICDMLASIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA G +++F G+V +DG I E R G IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG--ASPAEIGNQVAEELLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|114705601|ref|ZP_01438504.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506]
gi|114538447|gb|EAU41568.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506]
Length = 316
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 137/302 (45%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA A E R+ L+ H + + I +ST GDRI +R L+E+GGKGLFT
Sbjct: 8 IRIGTRGSPLALAQASEVRARLIAAHGLTEDDFAIEVISTSGDRILDRPLSEVGGKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ ID AVHS+KDM T + GL I+A+L RED+RD FI A++L DL +
Sbjct: 68 KEIEAALLDRRIDLAVHSSKDMATAIPDGLAITAFLEREDVRDAFIGRDAKTLADLPEGA 127
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G++SLRR+AL+ R R D++ I FRG ++TRL KL +A A LLA AG+ R++ +
Sbjct: 128 TVGSASLRRQALIKRLRPDLNTIIFRGNVQTRLRKLGEGQADATLLALAGLNRMEMQHHA 187
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+IL EDFPP+PGQGAICIE+ + + + LV I H++T +++ ERAFL LDGSC+
Sbjct: 188 TDILEPEDFPPAPGQGAICIESRQGDTRIENLVSAIVHDETSIALHAERAFLKVLDGSCR 247
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IA A + F+G++L DG HEV G+ A+ +G A + + + +
Sbjct: 248 TPIAARAVLWDSGRIAFHGMILRPDGTEVHEVHDEGDADGAVALGERAGRSVLEAAGPHF 307
Query: 305 FN 306
F+
Sbjct: 308 FD 309
>gi|89255577|ref|YP_512938.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
LVS]
gi|156501520|ref|YP_001427585.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167010342|ref|ZP_02275273.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FSC200]
gi|187932192|ref|YP_001892177.1| porphobilinogen deaminase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254368575|ref|ZP_04984591.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica FSC022]
gi|290954410|ref|ZP_06559031.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
URFT1]
gi|295312152|ref|ZP_06802958.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
URFT1]
gi|123401648|sp|Q2A5R3|HEM3_FRATH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217773|sp|A7N9H6|HEM3_FRATF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058914|sp|B2SE34|HEM3_FRATM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89143408|emb|CAJ78581.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica LVS]
gi|156252123|gb|ABU60629.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121478|gb|EDO65669.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica FSC022]
gi|187713101|gb|ACD31398.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 300
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|119897284|ref|YP_932497.1| porphobilinogen deaminase [Azoarcus sp. BH72]
gi|119669697|emb|CAL93610.1| hydroxymethylbilane synthase [Azoarcus sp. BH72]
Length = 316
Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 156/300 (52%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF
Sbjct: 15 IVIATRESRLALWQAEHVKARLEALY--PACTVELLGMTTRGDQILDRPLAKVGGKGLFV 72
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L+ G D AVHS KD+P ++ K + RE D F+S+ SL D+ +
Sbjct: 73 KELETALLDGRADIAVHSMKDVPMEMGKAFALPCISAREVPLDAFVSNRYASLADMPPGT 132
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG+ RL I
Sbjct: 133 VVGTSSLRRESQLHAQYPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLADRI 192
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGA+ IE + P+ + +N T V ERA L GSC+
Sbjct: 193 RATLPAEVSLPAAGQGALGIECLSSRPEVAAWLAPLNDPATSACVRAERAVARALAGSCE 252
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A +G+ L+ G V DG R G+ A +G A +R + +
Sbjct: 253 VPLGAYAELRGARLWLRGFVARPDGSEIVRAEREGDPAAAEALGGALADDLRAQGAERIL 312
>gi|21241393|ref|NP_640975.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str.
306]
gi|23821681|sp|Q8PPR3|HEM3_XANAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21106726|gb|AAM35511.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str.
306]
Length = 304
Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + +L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVADALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRVCVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D +GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|332975659|gb|EGK12548.1| porphobilinogen deaminase [Psychrobacter sp. 1501(2011)]
Length = 339
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 104/321 (32%), Positives = 171/321 (53%), Gaps = 21/321 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I TR SPLA+ A +S L ++ P + ++ + T+GD+I + L +IGGKGL
Sbjct: 11 KTLNIATRKSPLAMWQAEHIKSRLESLY--PELEVNLVTMVTQGDKILDTPLAKIGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P +L +GL + Y RE D F+S+ L+DL
Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMQLPEGLILGTYCKRETPTDAFVSNNYDKLEDLPE 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR+ + +R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ +
Sbjct: 129 GAVVGTASLRRQCQIKAFRPDLQIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
IK+ ++I+ P+ GQGA+ IE ++ EL+K +N + ERA L+G
Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDEAVLELLKPLNDGQARIRLKAERALNRRLEGG 248
Query: 244 CKSAIAGFAYCKGS-----------TLYFYGIVLASDGKIFH----EVSRNGN----RCD 284
C+ IA +A + TL+ G V + DG + +G+
Sbjct: 249 CQVPIAAYAVIEKDSEPSDQQIFQKTLWLRGRVGSEDGTTLLKAEKRIELSGDQAAREAQ 308
Query: 285 AINIGRDAAQYIRFISNKNVF 305
A +G + A + + ++
Sbjct: 309 AEQLGIEVADELLSLGADSIL 329
>gi|148909210|gb|ABR17705.1| unknown [Picea sitchensis]
Length = 373
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 135/307 (43%), Positives = 190/307 (61%), Gaps = 5/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGL
Sbjct: 67 VRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGL 126
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L
Sbjct: 127 FTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQA 186
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL +
Sbjct: 187 GSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQ 246
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGS
Sbjct: 247 HVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGS 306
Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300
C++ IAG+A K F G++ + DG E SR G D +++G DA + ++ +
Sbjct: 307 CRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTHEDMVSMGVDAGKELKERA 366
Query: 301 NKNVFNF 307
F++
Sbjct: 367 GPAFFDW 373
>gi|115314083|ref|YP_762806.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica
OSU18]
gi|122325870|sp|Q0BP15|HEM3_FRATO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115128982|gb|ABI82169.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
holarctica OSU18]
Length = 300
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEVAILSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|145220050|ref|YP_001130759.1| porphobilinogen deaminase [Prosthecochloris vibrioformis DSM 265]
gi|189028096|sp|A4SFJ8|HEM3_PROVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145206214|gb|ABP37257.1| porphobilinogen deaminase [Chlorobium phaeovibrioides DSM 265]
Length = 313
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 118/308 (38%), Positives = 165/308 (53%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG
Sbjct: 1 MKKQLIIGTRSSPLALWQAEYTKAELSR--HFPDLDITLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS + DL
Sbjct: 59 GLFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKNGVKMLDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 119 PKNAKVATSSLRRMSQLKSLRPDFDIKDIRGNLNTRFQKFDEGEFDAMMLAYAGVYRLNF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL E P+ GQGA+ IET V++ + +E+VKV+NH +T ER+ L L
Sbjct: 179 SDRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSNTEYCCKAERSLLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297
G C+ I +A K TL+ V + DG + A G + A+ +
Sbjct: 239 GGCQIPIGSYASFKNGTLHLLAFVGSVDGTKGIRNEITKTGLTSPAQAEAAGIELAEELL 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 KQGAEEIL 306
>gi|19849543|gb|AAL12220.1| porphobilinogen deaminase [Triticum aestivum]
Length = 308
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 130/305 (42%), Positives = 187/305 (61%), Gaps = 5/305 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR SPLALA A +TR L H I I+ + T GD I ++ L +IGGKGLF
Sbjct: 1 RIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIVIIKTTGDMILDKPLADIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L
Sbjct: 61 TKEIDDALLQGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVI ++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL +
Sbjct: 121 SVIASASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLGMPET 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+L++++ P+ QGAI I N+ K E + +NHEDT +V CER FL+ LDG+C
Sbjct: 181 ATSVLSVDEMLPAVAQGAIGITCRSNDDKMMEYLSSLNHEDTRLAVACEREFLSVLDGNC 240
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301
++ IA +AY F G++ + DG I +E SR+G + D + +G+DA ++ +
Sbjct: 241 RTPIAAYAYRDKDGNCSFRGLLASPDGSIVYETSRSGTYSFDDMVALGQDAGHELKSKAG 300
Query: 302 KNVFN 306
F+
Sbjct: 301 PGFFD 305
>gi|52081298|ref|YP_080089.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580]
gi|52786677|ref|YP_092506.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580]
gi|319647211|ref|ZP_08001433.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2]
gi|81609014|sp|Q65GK1|HEM3_BACLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52004509|gb|AAU24451.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
licheniformis ATCC 14580]
gi|52349179|gb|AAU41813.1| HemC [Bacillus licheniformis ATCC 14580]
gi|317390558|gb|EFV71363.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2]
Length = 313
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 119/306 (38%), Positives = 171/306 (55%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LA+ L +++ P I + TKGDRI + TL+++GGKG
Sbjct: 1 MRNIIVGSRRSKLAMTQTKWVIKKLEELN--PDFTFEIKEIVTKGDRILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++SGEID AVHS KDMP+ L +GL + RED RDV IS Q L DL
Sbjct: 59 LFVKEIEQAMLSGEIDMAVHSMKDMPSVLPEGLMVGCIPKREDARDVLISKGRQKLADLK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+V+GTSSLRR A LL+ R D+ + RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 QGAVVGTSSLRRSAQLLQMRPDLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L+ E P+ GQGA+ IE ++ + L +N T +V ERAFL ++
Sbjct: 179 DDVVTEFLDPESCLPAVGQGALAIECRGSDEELLSLFSRLNDRYTQLTVTAERAFLHAME 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAGFA + + G+V + DGK + + G D +GR+ A +
Sbjct: 239 GGCQVPIAGFAKMDEDGVIELTGLVASPDGKTVYRETVKGK--DPEAVGRECAAVMSEKG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKALID 302
>gi|118496750|ref|YP_897800.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. novicida U112]
gi|194324057|ref|ZP_03057832.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida
FTE]
gi|208779979|ref|ZP_03247322.1| porphobilinogen deaminase [Francisella novicida FTG]
gi|158512415|sp|A0Q481|HEM3_FRATN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118422656|gb|ABK89046.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella novicida U112]
gi|194321954|gb|EDX19437.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida
FTE]
gi|208743983|gb|EDZ90284.1| porphobilinogen deaminase [Francisella novicida FTG]
Length = 300
Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|114778663|ref|ZP_01453479.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1]
gi|114551128|gb|EAU53689.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1]
Length = 333
Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats.
Identities = 115/301 (38%), Positives = 157/301 (52%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L + P ++ + T+GD+I + L ++GGKGLFT
Sbjct: 27 IRIATRRSPLALWQAEYIAAELEKMS--PDVTTELVKIVTRGDKILDVPLAKVGGKGLFT 84
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ L G D AVHS KD+PT+L +G I A R D RD + T L L +
Sbjct: 85 KEIDEALFDGRADVAVHSMKDVPTQLPEGTSIRALPERADPRDAAATITGGGLDTLPEGA 144
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR A L + RG I+TRL+K+ + AI+LA AGI+R+ E +
Sbjct: 145 TIGTSSLRRVAQLQARFPTFKFVSVRGNIQTRLSKM-GQEVDAIILAAAGIRRMGMEDQM 203
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E P+ QG + I+T ++ LV +NH DT D ERAFLA L+G C+
Sbjct: 204 HEFIDTEMLLPAVAQGTLGIQTRNDDDVVNALVDRLNHADTVDRTRAERAFLARLEGGCQ 263
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IA FA G L G+V + DGKI G R D +G A I + +
Sbjct: 264 VPIAAFATLDGDQLTLKGLVGSVDGKIVIRREIVGLRRDGAAMGIALADEILDAGARPIL 323
Query: 306 N 306
Sbjct: 324 E 324
>gi|310815397|ref|YP_003963361.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25]
gi|308754132|gb|ADO42061.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25]
Length = 314
Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats.
Identities = 132/302 (43%), Positives = 176/302 (58%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIGTR SPLALA A+ETR L +P I + GD + ++ L EIGGKGL
Sbjct: 10 QPLRIGTRGSPLALAQAYETRDRLAQAFALPHEAFQIEVIKVTGDMVQDKALREIGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S +L D+
Sbjct: 70 FTREIEDALLDGSIDIAVHSMKDMPVEQPAGLLLDCYLPREDVRDAFVSLHGWTLADVPA 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
VIGTSSLRR+A +L R D++V++FRG ++TRL KL+ A A LA AG+ RL++
Sbjct: 130 GKVIGTSSLRRRAQILARRPDLTVVEFRGNVQTRLKKLDEGVADATFLAMAGLNRLQRGD 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + L +E P+ QGAI IE ++ + ++ VI+ T + ERAFLA LDGS
Sbjct: 190 VPLKALEVEQMLPAVAQGAIGIERRADDRIIEGMLAVIHDGPTGVRLAAERAFLAGLDGS 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + IAG A G + G VL DG G DA IG + A+ +R ++ +
Sbjct: 250 CHTPIAGLAEIIGDQIRLRGEVLRPDGSEAICDDMRGAAVDAAQIGAEMARKLRGLAGEG 309
Query: 304 VF 305
F
Sbjct: 310 FF 311
>gi|167626913|ref|YP_001677413.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189028091|sp|B0TW04|HEM3_FRAP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167596914|gb|ABZ86912.1| Hydroxymethylbilane synthase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 300
Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 168/304 (55%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL + + I + T+GD I ++ L +IGGK
Sbjct: 1 MKQIVIASRESKLALWQTNYVKDRIQQELN---IRCQINTMKTQGDIILDKPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E +++ + D AVHS KD+P +L +G +S+++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLSSFMPREDPRDAFVSNKYSSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 RGAIVGTSSLRRKAQLLHYRYDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELN 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D + +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLTGD--DPMRLGKLLAQEMIELGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|138896211|ref|YP_001126664.1| porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2]
gi|196250167|ref|ZP_03148861.1| porphobilinogen deaminase [Geobacillus sp. G11MC16]
gi|158513835|sp|A4IRG5|HEM3_GEOTN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134267724|gb|ABO67919.1| Porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2]
gi|196210351|gb|EDY05116.1| porphobilinogen deaminase [Geobacillus sp. G11MC16]
Length = 309
Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 174/305 (57%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L + P + + TKGDR+ + TL+++GGKG
Sbjct: 1 MRNIVVGSRRSKLALTQTNWVINELKRLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE ++++G ID AVHS KDMP L GL I + RED+RDV +S SL DL
Sbjct: 59 LFVKEIEHEMLTGGIDMAVHSMKDMPAVLPSGLVIGSVPRREDVRDVLVSKGNLSLSDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+VIGTSSLRR A LL +R D+++ RG I+TRL KL N AI+LA AG+ R+
Sbjct: 119 SGAVIGTSSLRRSAQLLAYRPDVTIKWIRGNIDTRLAKLKNEDYDAIVLAAAGLARMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ VI E L+ + P+ GQGA+ +E ++ + +E + +N E T +V ERAFL +++
Sbjct: 179 DDVISEYLSPDVCVPAVGQGALAVECREDDVELREWLSRLNDEQTERAVRAERAFLQQME 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A K ++ +V + DGK ++ G D +GR AA +
Sbjct: 239 GGCQVPIAGYAEVKEGMVHLTALVASPDGKEKYKEIVIG--ADPEEVGRQAAALLSEQGA 296
Query: 302 KNVFN 306
K +
Sbjct: 297 KELIE 301
>gi|319651737|ref|ZP_08005863.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2]
gi|317396556|gb|EFV77268.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2]
Length = 311
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 166/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL S L + P + + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWVISQLKSI--DPSFEFEVKEIVTKGDKILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ EID AVHS KDMP L GL I + RED RD IS L DL
Sbjct: 59 LFVKEIEQAMLDEEIDMAVHSMKDMPAVLPAGLTIGSIPEREDHRDALISKGHIKLNDLR 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A LL R D+ + RG I+TRL+KL + AI+LA AG+ R+
Sbjct: 119 EGSIVGTSSLRRGAQLLAQRPDLEIKWIRGNIDTRLSKLETEEYDAIILAAAGLSRMGWA 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
V+ E L E P+ GQGA+ IE ++ + + L+ +T +V ERAFL +++
Sbjct: 179 ADVVTEFLEPEVCVPAVGQGALSIECRESDKELRALLDKFTCSETNQTVRAERAFLHKME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAGFA + G+V + DGK+ ++ + G+ D +G A +
Sbjct: 239 GGCQVPIAGFATINETGEMELTGLVGSPDGKVIYKETLTGS--DPEELGVKMADMLTEQG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKELID 302
>gi|116622285|ref|YP_824441.1| porphobilinogen deaminase [Candidatus Solibacter usitatus
Ellin6076]
gi|116225447|gb|ABJ84156.1| hydroxymethylbilane synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 297
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 116/301 (38%), Positives = 153/301 (50%), Gaps = 11/301 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LAL A + L H I + T GD+IT+ L ++G KGLFT
Sbjct: 2 LVIASRGSQLALWQAHWVEAQLQAA----GHECRIEIIKTTGDKITDVPLAKVGTKGLFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G AVHS KD+PT+L +GL + A RED RD I T L +L L +
Sbjct: 58 KEIEEALLDGRAQLAVHSLKDLPTELPEGLVLGAVPKREDPRDAVIGKT---LAELPLGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R R D+ V RG ++TRL KL+ + AILLA AG+KRL I
Sbjct: 115 KVGTSSLRRSAQLKRLRPDLVVESIRGNLDTRLRKLDEGQYDAILLAAAGMKRLGWGARI 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
EIL + P+ GQGA+ IET L V+NH DT +V ER L L G C+
Sbjct: 175 AEILPPDLMCPAVGQGALAIETR----AGFVLPAVLNHADTHTAVLAERGLLGALGGGCQ 230
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I A G + G+V A DG G +A IG+ + + +
Sbjct: 231 VPIGAHATVAGGRVRLLGLVAAPDGSEIVRAEAEGASGEAAEIGKRLGAELLARGARRIL 290
Query: 306 N 306
+
Sbjct: 291 D 291
>gi|82703803|ref|YP_413369.1| porphobilinogen deaminase [Nitrosospira multiformis ATCC 25196]
gi|82411868|gb|ABB75977.1| hydroxymethylbilane synthase [Nitrosospira multiformis ATCC 25196]
Length = 321
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 161/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
I TR S LAL A R L +++ P I ++T+GD+I + TL++IGGKGL
Sbjct: 8 NKIVIATRESALALWQANFIRDRLAELY--PQMEFQISGMTTRGDQILDVTLSKIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P + G ++A RED RD F+S+ L L
Sbjct: 66 FIKELEQALEDGRADIAVHSMKDVPMDMPAGFALAAITEREDPRDAFVSNKYARLDALPP 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 126 GSVVGTSSLRRESQLRARFPHLQVQPLRGNVQTRLRKLDEGQFAAIILAAAGLKRLGLAE 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I +L+ + P+ GQGA+ IE + +L++ ++H T V ERA L GS
Sbjct: 186 RITALLSPDLSLPAVGQGALGIECRADRSDLIKLMEPLHHIPTARCVEAERAMSRALGGS 245
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + GFA G L G V + DG NG+ D +IG A+ ++ +
Sbjct: 246 CEVPLGGFAEIDGHVLRLRGFVASQDGIRMVSDELNGSPDDCASIGAQLAKNLKAKGAEE 305
Query: 304 VF 305
+
Sbjct: 306 IL 307
>gi|156742007|ref|YP_001432136.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941]
gi|189028097|sp|A7NKU8|HEM3_ROSCS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|156233335|gb|ABU58118.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941]
Length = 303
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 160/304 (52%), Gaps = 3/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ IGTR S LAL R +L H P + + ++T+GD I +R L IG K
Sbjct: 1 MRNSLTIGTRASKLALVQTHMIRDALQAAH--PGLTVAVERITTRGDIILDRPLNAIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF EIE+ + +G +D AVHSAKD+P+ L + ++ R D RD ++ +L L
Sbjct: 59 GLFVVEIEEAMRAGRVDLAVHSAKDLPSTLPPDMTLAVCPRRADPRDALVAQPGMTLASL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL
Sbjct: 119 PHGARVGTSSLRRACQLRALRPDLTLLDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+VI E+L + P+ GQG I +E + + L+ ++ ++ ERAFLA +
Sbjct: 179 EEVITELLEPDVLIPAVGQGIIGVEARAGDDEVLRLLAPLDDPAARAAITAERAFLARIG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ + A +G L YG++ A DG R+G+ D +G A+ +
Sbjct: 239 GGCRVPVGALALLEGDELLLYGMIGALDG-RMVRGMRSGSASDPAGLGSALAEELLDAGG 297
Query: 302 KNVF 305
+ +
Sbjct: 298 QALL 301
>gi|253575681|ref|ZP_04853017.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845019|gb|EES73031.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 320
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 114/318 (35%), Positives = 163/318 (51%), Gaps = 16/318 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTE 57
M K+ +GTR S LAL + L + H +P + I + TKGDRI + TL++
Sbjct: 1 MTKRTIVVGTRQSQLALTQTGQVIDDLKAICREHHLP-FDFEIRKIVTKGDRILDVTLSK 59
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
+GGKGLF +EIE+ +++GEID AVHS KDMP+ L GL A R D RD IS +S
Sbjct: 60 VGGKGLFVKEIEQAMLNGEIDLAVHSMKDMPSVLPDGLMNGAVPRRVDPRDALISRNGRS 119
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L + +GTSSLRR + L +R D + RG I++RL KL AI+LA AG+
Sbjct: 120 LDELPQGAKVGTSSLRRASQLRAYRPDFVLEPIRGNIDSRLRKLEEEGFDAIILAAAGLF 179
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I L E P+ GQGA+ IE ++ + + L+ + N DT +V ER FL
Sbjct: 180 RMGWEHRITAFLPAEVCLPAVGQGALGIECREDDDEVRRLLSLYNDPDTAVTVAAERRFL 239
Query: 238 AELDGSCKSAIAGFAYCKGST----------LYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L+G C+ I +A L G+V ++DG + S G D
Sbjct: 240 GVLNGGCQVPIGAYATLLPEEGASGETGRPRLRLTGMVGSADGTTILKESAEGT--DPTE 297
Query: 288 IGRDAAQYIRFISNKNVF 305
+G A + + +
Sbjct: 298 LGEQLAGRLISMGAAALL 315
>gi|56421180|ref|YP_148498.1| porphobilinogen deaminase [Geobacillus kaustophilus HTA426]
gi|61213219|sp|Q5KWK6|HEM3_GEOKA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56381022|dbj|BAD76930.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Geobacillus kaustophilus HTA426]
Length = 309
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 118/305 (38%), Positives = 174/305 (57%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L + P + + TKGDR+ + TL+++GGKG
Sbjct: 1 MRNIVVGSRRSKLALTQTKWVINELKQLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL
Sbjct: 59 LFVKEIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVSRREDARDVLVSKGNRMLSDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
SVIGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+
Sbjct: 119 PGSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWG 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ VI + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++
Sbjct: 179 DDVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQME 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A K T+ +V + DGK ++ G D +GR AA +
Sbjct: 239 GGCQVPIAGYAEVKEGTVRLTALVASPDGKEMYKEIVTG--ADPEAVGRQAAAILSEQGA 296
Query: 302 KNVFN 306
K +
Sbjct: 297 KALIE 301
>gi|148655885|ref|YP_001276090.1| porphobilinogen deaminase [Roseiflexus sp. RS-1]
gi|166217784|sp|A5UU37|HEM3_ROSS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148567995|gb|ABQ90140.1| hydroxymethylbilane synthase [Roseiflexus sp. RS-1]
Length = 303
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 162/304 (53%), Gaps = 3/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ IGTR S LAL + R +L H P + + ++T+GD I +R L IG K
Sbjct: 1 MKQTLIIGTRASKLALVQTYMVRDALQSAH--PGLTVAVEHITTRGDIILDRPLNAIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF EIE+ + +G ID AVHSAKD+P+ L + ++A R D RD ++ +L L
Sbjct: 59 GLFVVEIEEAMRAGRIDLAVHSAKDLPSVLPPDMTLAACPRRADPRDALVAQPGMTLAAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL
Sbjct: 119 PSGARVGTSSLRRACQLRALRPDLTLVDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I E++ + P+ GQG I +E ++ + L+ ++ + ++ ERAFLA +
Sbjct: 179 DGAISELIEPDVLIPAVGQGVIGVEARADDEEVLRLLAPLDDQAARIAITAERAFLARIG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ + A+ +G L G++ A DG + G+ D + +G A +
Sbjct: 239 GGCQVPVGALAHLEGDELLLRGMIGARDG-RMVRGMQRGSASDPVGLGCALADELLDQGG 297
Query: 302 KNVF 305
+ +
Sbjct: 298 RALL 301
>gi|78187286|ref|YP_375329.1| porphobilinogen deaminase [Chlorobium luteolum DSM 273]
gi|123757188|sp|Q3B2Z5|HEM3_PELLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78167188|gb|ABB24286.1| Porphobilinogen deaminase [Chlorobium luteolum DSM 273]
Length = 313
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 122/308 (39%), Positives = 166/308 (53%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L P I + + T GD + + L++IG
Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSR--HFPDLEITLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS T L DL
Sbjct: 59 GLFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 119 PKNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL E P+ GQGA+ IET V++ + +E+VKV+NH T ERA L L
Sbjct: 179 SDRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSTTEYCCKAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297
G C+ I +A K TL+ V ++DG I + A G + A+ +
Sbjct: 239 GGCQIPIGAYASFKNGTLHLLAFVGSTDGTIGIRDEITKTGLTSPSQAEEAGIELAKELL 298
Query: 298 FISNKNVF 305
+ +
Sbjct: 299 KQGAEKIL 306
>gi|257453642|ref|ZP_05618932.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60]
gi|257449100|gb|EEV24053.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60]
Length = 319
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 10/309 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR SPLAL A ++ L ++ P + ++P+ T+GD+I + L +IGGKGLF
Sbjct: 6 TLNIATRQSPLALWQAEHIQARLQALY--PSLTVNLVPMVTQGDKILDTPLAKIGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L D AVHS KD+P L +GL + AY RE D FIS+ +SL L
Sbjct: 64 VKELEQALYEKRADIAVHSLKDVPMVLPEGLTLGAYCEREQPTDAFISNHYESLDALPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+ + ++R D+ +I RG + TRL+KL+ + AI+LA +G+ RL
Sbjct: 124 AKLGTSSLRRQCQIQQYRPDLEIISLRGNVGTRLSKLDAGEYDAIILATSGLTRLGLTDR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L+ P+ GQGA+ IE ++ L+K +N E + V ERA L G C
Sbjct: 184 IRHELDTHISLPAVGQGALAIECRSDDADVLALLKPLNDEPSRLCVMAERAMNRHLQGGC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--------AINIGRDAAQYI 296
+ IAGFA + ++ G V + DGK + + D A +G A+ +
Sbjct: 244 QVPIAGFATIQDGQIHLQGRVGSVDGKTLLKAEHHNALVDDARESQQIAEAVGVVVAEAL 303
Query: 297 RFISNKNVF 305
+
Sbjct: 304 IAQGADKIL 312
>gi|328675303|gb|AEB27978.1| Porphobilinogen deaminase [Francisella cf. novicida 3523]
Length = 300
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 169/304 (55%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL + + IP I + T+GD I ++ L ++GGK
Sbjct: 1 MKQITIASRESKLALWQTNFVKKYIQKELNIP---CEITTMKTQGDIILDKPLNKVGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E + +G+ + AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEIAMQNGKANIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL++ + AI+LA AG+ RL+
Sbjct: 118 KGAIVGTSSLRRKAQLLHYRDDLVIKDLRGNVQTRLSKLDSGEYDAIILASAGLIRLELN 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALDRDVELLEKLQKLNCSTSFRMATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ A+ + +
Sbjct: 238 GCHVAIGAYAELNNNQITLTAMVASSDGKKILKRKMIGD--DPTKVGKLLAREMIELGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|126733455|ref|ZP_01749202.1| porphobilinogen deaminase [Roseobacter sp. CCS2]
gi|126716321|gb|EBA13185.1| porphobilinogen deaminase [Roseobacter sp. CCS2]
Length = 311
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 131/301 (43%), Positives = 175/301 (58%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PF IGTR SPLALA A ETRS LM +P I + GD I +R L EIGGKGLF
Sbjct: 11 PFNIGTRGSPLALAQAHETRSRLMAAFNLPEEAFAICVIKVTGDAIQDRPLKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE+ L+ G ID AVHS KDMP GL + YLPRED+RD F+S A SL DLA
Sbjct: 71 TREIEEALLDGSIDIAVHSMKDMPVDQPGGLLLDTYLPREDVRDAFVSLNASSLNDLAEG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR++ LL R D+++++FRG ++TRL KL + A A LA AG+ RL V
Sbjct: 131 ATVGTSSLRRRSQLLAKRPDLNIVEFRGNVQTRLKKLGDGVAEATFLAMAGLNRLHMTDV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QGAI IE ++ +A ++ I+ T + ER+FLA LDGSC
Sbjct: 191 PRTAVAPEDMLPAVAQGAIGIERRGDDSRAAAMLDAIHDHATGRRLAAERSFLAALDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ I G A G ++ G +L +DG +G+ D +G A + + +
Sbjct: 251 ETPIGGLAELDGGSIRLRGEILRTDGTEVFADDMSGSIEDGPAMGHAMAAKLLEKAGPDF 310
Query: 305 F 305
F
Sbjct: 311 F 311
>gi|224476761|ref|YP_002634367.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254800259|sp|B9DNE1|HEM3_STACT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222421368|emb|CAL28182.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 308
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 176/306 (57%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSRQFIERLKKVE--PDLDIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+++L EID A+HS KD+P++L GL + RE D FIS L DL
Sbjct: 59 LFVKEIQQELFDHEIDMAIHSLKDVPSELPDGLTLGCIPDREIPLDAFISKNHVQLADLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG++R+
Sbjct: 119 DGSIVGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLSKLETEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ E L+ E P+ GQGA+ IE ++ + +L+ +++++ + V ER FL E++
Sbjct: 179 DDIVTEYLDPELLVPAIGQGALGIECRSDDTELLDLLSKVHNQEVAECVTAERTFLKEMN 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + L F G++++ DGK E + G D + +G++ + ++
Sbjct: 239 GSCQVPIGGYATIDDNGRLTFTGLIMSPDGKQRFEQTATG--NDPVELGKEVSDILKEQG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKEIID 302
>gi|258404816|ref|YP_003197558.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692]
gi|257797043|gb|ACV67980.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692]
Length = 311
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ I TR S LAL A + L + + P + + + T+GD+I + L +IGGK
Sbjct: 1 MRSLTIATRGSKLALWQANHIKGRLEERY--PGIEVHLEVIKTQGDKILDVPLAKIGGKA 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ G D AVHS KD+P +L +GL + RED D +S +L+++
Sbjct: 59 LFVKEIEEAMLDGRADLAVHSMKDVPAELPEGLTLGVIPQREDYTDCLLSQHYTTLEEIP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGTSSLRRK LLR R D+ + D RG ++TR+ KL AI++A AG++RL+
Sbjct: 119 EGATIGTSSLRRKTQLLRLRPDLVIQDLRGNLDTRIRKLEEGMFDAIVVASAGLRRLQTG 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L F P+ GQGA+ IE + +E++ ++H T V ERAFL L+G
Sbjct: 179 ARYMTELAPPQFLPAVGQGALGIEYPEDRKDLEEMLGFLDHPPTRFCVLTERAFLHRLEG 238
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I G A + + L+ V G+ D + +G+ A I
Sbjct: 239 GCQVPIGGHAVMSESNKLHLDCFVADLHGQQCLRREGEAKPKDGVALGQRLADDILASGG 298
Query: 302 KNVF 305
+
Sbjct: 299 AEIL 302
>gi|226942049|ref|YP_002797123.1| porphobilinogen deaminase [Laribacter hongkongensis HLHK9]
gi|254800253|sp|C1D679|HEM3_LARHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226716976|gb|ACO76114.1| Hem3 [Laribacter hongkongensis HLHK9]
Length = 308
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 160/304 (52%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R SPLA+ A R+ L ++ P + I+ ++T+GDRI ++TL +IGGKG
Sbjct: 1 MKQVVIASRESPLAMWQAEHIRARLQALY--PGLEVSILGITTQGDRILDKTLNKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E + G+ D AVHS KD+P L +G ++A RED RD F+S SL +L
Sbjct: 59 LFVKELELAMQEGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT+SLRR++ + + V RG ++TRL KL+ + AI+LA +G+KR+
Sbjct: 119 AGAVVGTASLRRESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I+ L+ D P+ GQGA+ IE + L+ +NH T+ V ERA L
Sbjct: 179 ERIRMELSTADSLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGA 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC+ + G+A L G V DG A +GR A+ +
Sbjct: 239 SCQIPVGGYAEQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALGRTIAKKLLDQGAD 298
Query: 303 NVFN 306
+V +
Sbjct: 299 DVID 302
>gi|261418339|ref|YP_003252021.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61]
gi|297529191|ref|YP_003670466.1| porphobilinogen deaminase [Geobacillus sp. C56-T3]
gi|319767702|ref|YP_004133203.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52]
gi|261374796|gb|ACX77539.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61]
gi|297252443|gb|ADI25889.1| porphobilinogen deaminase [Geobacillus sp. C56-T3]
gi|317112568|gb|ADU95060.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52]
Length = 310
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 173/305 (56%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L + P + + TKGDR+ + TL+++GGKG
Sbjct: 1 MRNIVVGSRRSKLALTQTKWVINELKQLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL
Sbjct: 59 LFVKEIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
SVIGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+
Sbjct: 119 PGSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWG 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ VI + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++
Sbjct: 179 DDVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQME 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A G + +V + DGK ++ G D +GR AA +
Sbjct: 239 GGCQVPIAGYAEADGGMVRLTALVASPDGKEKYKEMVTG--ADPEAVGRQAAAVLIEQGA 296
Query: 302 KNVFN 306
K +
Sbjct: 297 KALIE 301
>gi|254431329|ref|ZP_05045032.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001]
gi|197625782|gb|EDY38341.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001]
Length = 321
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 151/313 (48%), Gaps = 9/313 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI +R S LA+ R L H I I ++T+GD+I + L +IG
Sbjct: 1 MAGSTLRIASRRSQLAMVQTHWVRDELAKAHD--DLTITIEAMATQGDKILDVALAKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117
KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++
Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHAKHRDKT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL
Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDEPVLEQIKVLEHLPTARRCLAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
EL+G C+ I G L G+V + DG+ G + D IG A
Sbjct: 239 RELEGGCQVPIGVNTRFDGAGESGELVLTGMVASLDGQRLIRDEARGPQDDPEAIGIALA 298
Query: 294 QYIRFISNKNVFN 306
+ +R +
Sbjct: 299 RSLRNQGAGEILE 311
>gi|86609244|ref|YP_478006.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557786|gb|ABD02743.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 310
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 151/303 (49%), Gaps = 5/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R S LAL L + H P + + LST+GD I + L +IG KGLFT
Sbjct: 1 MRIASRKSELALVQTQWVMGQLQEHH--PGLPLELNTLSTQGDIILDVALAKIGDKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK---DLA 122
+E+E L++G D AVHS KD+PT+L +GL + A RED D + L
Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITRREDPLDALVVGEKFRDYRLATLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A L + D RG + TRL KL + ++LA AG+KRL K
Sbjct: 119 EGTVIGTSSLRRLAQLRHAFPHLHFKDVRGNLNTRLAKLERGEYDGLILAVAGLKRLGKA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G
Sbjct: 179 DRIHEVLDPGVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I + +G L+ G+V DG+ ++ G+ D +G A+ ++
Sbjct: 239 GCQVPIGVHSQVQGEALHLTGMVADLDGRRLIRDTQTGSTADPEAVGMALAEKLKQQGAD 298
Query: 303 NVF 305
+
Sbjct: 299 EIL 301
>gi|289667461|ref|ZP_06488536.1| porphobilinogen deaminase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 304
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LDARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D +GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|166710503|ref|ZP_02241710.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 304
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 169/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAVLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LDARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D ++GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|62259213|gb|AAX77846.1| unknown protein [synthetic construct]
Length = 335
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 168/305 (55%), Gaps = 5/305 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 26 EMKQITIASRESKLALWQTNFVKNRIQLELNIP---CEISTMKTQGDIILDQPLNKIGGK 82
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 83 ALFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDL 142
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+
Sbjct: 143 PKGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLEL 202
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL
Sbjct: 203 VERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELK 262
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 263 GGCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGA 320
Query: 302 KNVFN 306
+
Sbjct: 321 YKILE 325
>gi|188584576|ref|YP_001928021.1| porphobilinogen deaminase [Methylobacterium populi BJ001]
gi|179348074|gb|ACB83486.1| porphobilinogen deaminase [Methylobacterium populi BJ001]
Length = 309
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 119/307 (38%), Positives = 170/307 (55%), Gaps = 4/307 (1%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M +P RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIG
Sbjct: 1 MSLSRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL- 118
GKGLFT+E+E+ L + ID AVHS KD+ T L GL I+ L R+D RD F+S +
Sbjct: 59 GKGLFTKELEQALFADTIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSAGTANGL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL + +GTSSLRR A +L R D+ ++ RG TR+ KL + A LLA AG++R
Sbjct: 119 ADLPSGARVGTSSLRRGAQVLMHRPDLMIVPLRGNANTRMRKLEAGECDATLLALAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L E V + +L +E+ P+ QGA+ IE + + L+ + T +++ ER LA
Sbjct: 179 LGMEDVARSVLPVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IA A G + G++ DG V R G +A IGRDA ++
Sbjct: 239 ELDGSCRTPIAALAQVNGDRIALDGLLFLPDGSRHWAVHREGPAAEADAIGRDAGAELKR 298
Query: 299 ISNKNVF 305
+ F
Sbjct: 299 SAGDVYF 305
>gi|255066348|ref|ZP_05318203.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256]
gi|255049558|gb|EET45022.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256]
Length = 312
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L + ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEDFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPATYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIE 304
>gi|302879710|ref|YP_003848274.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2]
gi|302582499|gb|ADL56510.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2]
Length = 317
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + +L++IGGKGLF
Sbjct: 15 LVIASRESALAMWQAEHIRDRLRALY--PQTDVSILGMTTQGDQILDVSLSKIGGKGLFV 72
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L +G ++A RED D F+S+ ++L L S
Sbjct: 73 KELETALEDGRADFAVHSLKDVPMVLPEGFVLAAIGEREDPHDAFVSNNYENLAALPAGS 132
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L + + RG ++TRL KL+ AI+LA AG+KRL I
Sbjct: 133 VVGTSSLRRESQLRARFPHLVIEPLRGNVQTRLRKLDEGLYAAIILAAAGLKRLGLATRI 192
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +++ ED P+ GQGA+ IE + ++ ++H DT V ERA L+GSC+
Sbjct: 193 RAVISSEDSLPAVGQGALGIECRADRLDVIAALQPLHHPDTAACVFAERAMSRALNGSCQ 252
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ GFA + L G V + DG+ G +G A+ + +
Sbjct: 253 VPLGGFAEVQNGQLRMRGFVASPDGQRVIRAEAMGEIAAPEALGGQIAKSLLAQGAGEIL 312
>gi|84625435|ref|YP_452807.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575118|ref|YP_001912047.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|123752694|sp|Q2NYU4|HEM3_XANOM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059004|sp|B2SMV3|HEM3_XANOP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|84369375|dbj|BAE70533.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519570|gb|ACD57515.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 304
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LDERISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A A +G L+ G+V ++ +G+ D ++GR AQ +
Sbjct: 237 HGSCHVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|328676207|gb|AEB27077.1| Porphobilinogen deaminase [Francisella cf. novicida Fx1]
Length = 300
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELYNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|294625631|ref|ZP_06704254.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292600054|gb|EFF44168.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 304
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D +GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|289664026|ref|ZP_06485607.1| porphobilinogen deaminase [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 304
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LDARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D +GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|56707415|ref|YP_169311.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669886|ref|YP_666443.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
FSC198]
gi|224456493|ref|ZP_03664966.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370888|ref|ZP_04986893.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
tularensis FSC033]
gi|254874253|ref|ZP_05246963.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|61213244|sp|Q5NI31|HEM3_FRATT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123169616|sp|Q14JI3|HEM3_FRAT1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56603907|emb|CAG44892.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320219|emb|CAL08275.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis FSC198]
gi|151569131|gb|EDN34785.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
tularensis FSC033]
gi|254840252|gb|EET18688.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158558|gb|ADA77949.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. tularensis NE061598]
Length = 300
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQLELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|23099523|ref|NP_692989.1| porphobilinogen deaminase [Oceanobacillus iheyensis HTE831]
gi|39931547|sp|Q8CXC0|HEM3_OCEIH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|22777752|dbj|BAC14024.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Oceanobacillus iheyensis HTE831]
Length = 309
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +GTR S LAL L I + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIVGTRKSNLALTQTEWVIDQLKKAGVKN--EFEIKKIVTKGDQILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIEK + EID AVHS KDMP + +GL IS+ RED RD +++ L+DL
Sbjct: 59 LFVKEIEKAMFDKEIDLAVHSMKDMPAVIPEGLTISSIPEREDHRDAYLAKDNILLQDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181
+++GTSSLRR A +L R D+++ RG IETR+ KL AI+LA +G+KR+
Sbjct: 119 EGAIVGTSSLRRGAQILAERPDLTIKWIRGNIETRIRKLQEEDYDAIILAVSGLKRVGLS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E++I E L E P+ GQGA+ IE+ ++ + +VK I+ T +V+ ER FL L+
Sbjct: 179 EELITEYLEPEVCVPAVGQGALAIESREDDEELTNIVKKIHDAYTAKTVSAERTFLHLLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I G+AY G + +V DG + + G + +G++AA+ +
Sbjct: 239 GGCQVPIGGYAYLDGDEVVLTALVGDPDGTTILKETVRGT--EPTEVGKEAAELLISQGA 296
Query: 302 KNVFN 306
K + +
Sbjct: 297 KEIVD 301
>gi|325927040|ref|ZP_08188311.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118]
gi|325542591|gb|EGD14062.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118]
Length = 304
Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D +GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGQGLFLQGMVGSASDGRLIHADAHGSAEDTEALGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|294666828|ref|ZP_06732061.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292603412|gb|EFF46830.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 304
Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 170/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADGLVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L+ ++ P+P QGA+ +E ++ + L+ V++ + T V ERA L
Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDADRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D +GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|225175616|ref|ZP_03729610.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1]
gi|225168945|gb|EEG77745.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1]
Length = 314
Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 162/305 (53%), Gaps = 3/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK +G+R S LAL L P + + + T+GD+I + L++IG K
Sbjct: 1 MKKTIVVGSRDSELALTQTHFVIGELQK--HFPDVDFTVKHIKTEGDKILDVALSKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-KD 120
GLF +EIE L+S EID AVHS KD+PT + GLQI+ RED RD +I+ ++ D
Sbjct: 59 GLFVKEIENALLSKEIDFAVHSMKDVPTAVPDGLQITTITEREDPRDCYIAKDGKTRLFD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+VIGTSSLRR A LL RSD ++ RG + TR KL+ H I+LAYAG+ RL
Sbjct: 119 TPQGAVIGTSSLRRSAQLLHQRSDFEIVPIRGNLNTRFRKLSEQDMHGIILAYAGVYRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I EI++ E P+ GQGA+ IET ++ +V +NH+ T ++ ERAFL +L
Sbjct: 179 WADKITEIIDFEKSLPAVGQGALGIETRSDDDFTINIVSALNHDTTASAILAERAFLRQL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I + + L G+V DG G+ ++ +G+ AQ +
Sbjct: 239 EGGCQVPIGAYGRLEAEELVLDGVVAGLDGSTVLRDQVRGSADESDALGKKLAQKMVERG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ADEIL 303
>gi|323699104|ref|ZP_08111016.1| porphobilinogen deaminase [Desulfovibrio sp. ND132]
gi|323459036|gb|EGB14901.1| porphobilinogen deaminase [Desulfovibrio desulfuricans ND132]
Length = 310
Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A + L H P ++ ++ + TKGD+I + L ++GGKG
Sbjct: 1 MKKLTIATRGSALALWQANHIKDRLEAEH--PGLSVDLLKIKTKGDKILDVPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G AVHS KD+PT+L GL++ RE+ D +S L L
Sbjct: 59 LFVKEIEEALLDGRAQLAVHSMKDVPTELPDGLEVGIIPEREEATDSLLSVKYDGLAGLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR++ L R D+ + RG ++TRLNKL N + AI+LA AG+KRL
Sbjct: 119 EGAVVGTSSLRRQSQLCALRPDLKIETLRGNLDTRLNKLLNGEYDAIVLATAGLKRLAMS 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+EIL+ +F P+ QGA+ IE + + ++L+ ++H T V ER FL LDG
Sbjct: 179 APKQEILSPPEFLPAVAQGALGIEFRSADTEVRDLLAFLDHAPTKHQVLAERGFLTGLDG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IA ++ +G TL G V DG GN A ++G A + K
Sbjct: 239 GCQVPIAAWSVIEGETLRLTGYVAEVDGSTPIRRMVEGNVAHAWDLGMILAGQVLEAGGK 298
Query: 303 NVFN 306
+ +
Sbjct: 299 AILD 302
>gi|239827917|ref|YP_002950541.1| porphobilinogen deaminase [Geobacillus sp. WCH70]
gi|259647799|sp|C5D5K7|HEM3_GEOSW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|239808210|gb|ACS25275.1| porphobilinogen deaminase [Geobacillus sp. WCH70]
Length = 311
Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 172/306 (56%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P + + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWVIERLRQLGA--PFEFEVKEIVTKGDKIIDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE +++GEID AVHS KDMP L GL I PRED DV IS ++ +L
Sbjct: 59 LFVKEIEHAMLNGEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHHDVLISKNKETFANLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A +L R D+ + RG I+TRL KL N AI+LA AG+ R+
Sbjct: 119 SGAIVGTSSLRRSAQILAKRPDLKIKWIRGNIDTRLAKLQNEDYDAIILAAAGLVRMGWA 178
Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ VI E L+ + P+ GQGA+ +E N+ + +E ++ +N T +V ER FL +++
Sbjct: 179 RDVITEYLSTDVCLPAVGQGALAVECRENDEELREWLQKLNDVHTERAVLAERVFLQQME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+AY + +V + DGK ++ + +G+ + +G +AA+ +
Sbjct: 239 GGCQVPIAGYAYIDDREDIVLTALVASPDGKEIYKETVSGS--NPEEVGTNAAKMLIERG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKALID 302
>gi|218533190|ref|YP_002424006.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4]
gi|218525493|gb|ACK86078.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4]
Length = 309
Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 124/307 (40%), Positives = 176/307 (57%), Gaps = 4/307 (1%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIG
Sbjct: 1 MSLSRALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSL 118
GKGLFT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + A L
Sbjct: 59 GKGLFTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL + +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++R
Sbjct: 119 ADLPPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L E V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LA
Sbjct: 179 LGMEDVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IA A KG + G++ DG EV R G DA IGRDA ++
Sbjct: 239 ELDGSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWEVHREGLAADADAIGRDAGAELKR 298
Query: 299 ISNKNVF 305
+ F
Sbjct: 299 AAGDVYF 305
>gi|189499889|ref|YP_001959359.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1]
gi|238058915|sp|B3EPK0|HEM3_CHLPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189495330|gb|ACE03878.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1]
Length = 313
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 122/308 (39%), Positives = 164/308 (53%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L P I + + T GD + + L++IG
Sbjct: 1 MKKKLIIGTRSSPLALWQADFTQAELSK--HFPDLEIELKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK LISGEID AVHS KD+PT+ +GL +SA+ RED RDV IS +SLK L
Sbjct: 59 GLFTKDIEKHLISGEIDLAVHSLKDVPTETPEGLMLSAFTEREDTRDVIISKNGESLKTL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 119 KQDAKIATSSLRRTSQLLSMRPDFQMGDIRGNLNTRFKKFDESDFDAMMLAYAGVHRLNF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL E P+ GQGA+ IET V++ +E+V V+N+ +T ERA L L
Sbjct: 179 GDRISEILPHEVMLPAVGQGALGIETRVDDEATKEIVSVMNNVNTEFCTKAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRDAAQYIR 297
G C+ I +A K L+ V + DGK A G + A+ +
Sbjct: 239 GGCQIPIGSYASLKNGNLHLLAYVGSVDGKRTIRNEITKENCTLPEQAEQAGIELAEELL 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 KQGANEIL 306
>gi|297537269|ref|YP_003673038.1| porphobilinogen deaminase [Methylotenera sp. 301]
gi|297256616|gb|ADI28461.1| porphobilinogen deaminase [Methylotenera sp. 301]
Length = 319
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 165/301 (54%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R SPLA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGLF
Sbjct: 14 KLVIASRESPLAMWQALHIQSRLQALY--PSTIVEILGMTTTGDQILDTPLAKVGGKGLF 71
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A RED RD F+S+ SL+DL
Sbjct: 72 VKELETALEDGRADLAVHSMKDVPMNLPEGFMMAATGEREDPRDAFVSNDFNSLEDLPEG 131
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 132 SIVGTSSLRRQSQLQARLPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLSAR 191
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +++ E P+ GQGA+ IE + N P ++ +NH DT V ERA L GSC
Sbjct: 192 IRNVISPELSIPAVGQGALGIEINANRPDLLAVLAPLNHPDTQVCVEAERAMSRALAGSC 251
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A CKG + G V + DGK + NGNR A +G+ A + ++
Sbjct: 252 TVPLGAYATCKGEEISITGFVASVDGKQMLIETANGNRNQADALGKALANQLLAKGANDI 311
Query: 305 F 305
Sbjct: 312 L 312
>gi|254375261|ref|ZP_04990741.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548]
gi|151572979|gb|EDN38633.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548]
Length = 300
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELYNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|308174513|ref|YP_003921218.1| porphobilinogen deaminase [Bacillus amyloliquefaciens DSM 7]
gi|307607377|emb|CBI43748.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens DSM 7]
gi|328554432|gb|AEB24924.1| porphobilinogen deaminase [Bacillus amyloliquefaciens TA208]
gi|328912836|gb|AEB64432.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens LL3]
Length = 313
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKG
Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIQEIVTKGDRILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L D+
Sbjct: 59 LFVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 EGGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++
Sbjct: 179 DDVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTKRTVAAERAFLHAME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + G+V + DGK ++ + G+ D IG+ A +
Sbjct: 239 GGCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGH--DPEEIGKRCAAMMSEKG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKALID 302
>gi|319779685|ref|YP_004130598.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9]
gi|317109709|gb|ADU92455.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9]
Length = 313
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR S LA+ A + L + P N+ + ++TKGD+I ++TL++IGGK
Sbjct: 4 SIKNLRIATRESRLAVWQAEFVQKKLKSI--FPHLNVELHKMTTKGDQILDKTLSKIGGK 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E L+SG D AVHS KD+P +L +I+ L RE+ D F+S+ ++ KDL
Sbjct: 62 GLFIKELESSLLSGVTDLAVHSLKDVPVELNDEFEIACILERENPMDAFVSNEYKTFKDL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR++ + + V RG ++TRL KL++ + AI+LA AG+KRL
Sbjct: 122 PEGAIVGTSSLRRESQIRAKFPHLVVKPLRGNLDTRLKKLDDGQYSAIILAAAGLKRLNM 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
IK ++I+D P+ GQGA+ IE + +E++ ++HE+T+ V+ ER L
Sbjct: 182 MDRIKSFVSIDDSLPAVGQGALAIEILKDKFALKEMLSYLHHEETFKCVSAERIVSQYLG 241
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ +A A +V + DG G+ + ++ A +
Sbjct: 242 GSCQVPLAAHACVINDLFQVRALVASPDGSRILRAESFGSPDEYESVATTVALNLIDQGA 301
Query: 302 KNVFN 306
+ + N
Sbjct: 302 REIIN 306
>gi|256828337|ref|YP_003157065.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028]
gi|256577513|gb|ACU88649.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028]
Length = 311
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 157/304 (51%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RI TR S LAL A L + P + + + TKGD+I + L +IGGKG
Sbjct: 1 MNTIRIATRGSKLALWQAHHISGLLRAQY--PGMTVELNIIKTKGDKILDVPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L++ E D AVHS KD+P +L +GL++ RE D F+S + L
Sbjct: 59 LFVKEIEEALLADEADIAVHSMKDVPAQLPEGLKLGIIPEREQPTDSFLSVNYPDIASLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+ L+ R D+ ++ RG ++TR+ KL + AI++A AG+ RL+
Sbjct: 119 AGARVGTSSLRRQTQLMGLRRDLCILSLRGNLDTRVGKLMAGEFDAIIVATAGMNRLELS 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ L F P+ QGA+ IE + P+ EL+ ++H + V ER+FL LDG
Sbjct: 179 APHMQELAPPMFYPAVAQGALGIEYRADRPQLDELLAFLDHAPSKICVEAERSFLFGLDG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ IAG+A G+ + G+V G+ A+ +G A+ + K
Sbjct: 239 GCQVPIAGYATLSGTEITLTGLVADLCGERVIRRQATALSHAAVELGAQVAKAVLADGGK 298
Query: 303 NVFN 306
+ +
Sbjct: 299 EILD 302
>gi|229918358|ref|YP_002887004.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b]
gi|259647797|sp|C4L4J6|HEM3_EXISA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229469787|gb|ACQ71559.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b]
Length = 305
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LA+ L I + TKGD+I + L+++GGKG
Sbjct: 1 MRKIIVGSRRSQLAMTQTKWVIEQLKQAGATN--EFEIKEIVTKGDQIVDVQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+++++ G+ID AVHS KD+P +L + L IS R D RDV I + + L
Sbjct: 59 LFVKEIQQQMLDGDIDFAVHSMKDVPAELPEELYISCMPKRVDARDVLICENGYTFETLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L R D+ + RG I+TRL KL++ +AILLA AG++R+
Sbjct: 119 KGSIVGTSSLRRGAQILAARPDLEIQWIRGNIDTRLKKLDSENYNAILLAKAGLERMGWT 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++V E L+ + P+ GQG + IE+ ++ + ++++++ + T + ER FL ++
Sbjct: 179 DRVDFEALDPDVMVPAVGQGVLAIESRKDDAEVTTVLQLLHDDVTAKAATAERTFLKAIE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC + G+A G + G++ + DGK V++ D + +G+ A+ +
Sbjct: 239 GSCHVPVGGYATVNGDDVTLTGLIASVDGKEVLRVTKTST--DGVALGQAVAEELLGRGG 296
Query: 302 KNVF 305
+ +
Sbjct: 297 REIL 300
>gi|242060648|ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
gi|241931444|gb|EES04589.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
Length = 356
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 130/306 (42%), Positives = 182/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300
C++ IA +AY F G++ + DG E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|134302637|ref|YP_001122606.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|158513860|sp|A4IZY4|HEM3_FRATW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134050414|gb|ABO47485.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 300
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASRESKLALWQTNFIKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|159900065|ref|YP_001546312.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779]
gi|159893104|gb|ABX06184.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779]
Length = 300
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 163/303 (53%), Gaps = 3/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
IGTR S LAL R +L+ H P I + ++TKGD I +R L IG KG
Sbjct: 1 MNILTIGTRKSQLALVQTHAMRDALLAAH--PQLTIELEHITTKGDAILDRPLAAIGDKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF EIE + +G++D AVHSAKD+P+ L + I+AY R D RDV + + L DL
Sbjct: 59 LFVSEIEDAMRNGKVDLAVHSAKDLPSILAPDMTIAAYPERADPRDVLVGAEGRRLADLV 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSS RR A L R D+++ID RG ++TRL KL+ + AI+LA AG++RL
Sbjct: 119 PGAKVGTSSPRRAAQLRHLRPDLTIIDIRGNVDTRLRKLDEGQYDAIVLAAAGLQRLGLL 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
K + + + P+ QG + IE + + +L+KV++H ++ + E+AFLA + G
Sbjct: 179 KRVTQFFEPAEMTPAVSQGILGIEARAGDQRVADLLKVLDHAESRATAEAEKAFLATIGG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ A+ FA + L+ G++ A DG G+ A +G AQ + +
Sbjct: 239 GCQVAVGAFATYQIGQLHLIGMIGALDG-RLVRGELTGSASTAQALGTSLAQQLLAQGGR 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|319789486|ref|YP_004151119.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1]
gi|317113988|gb|ADU96478.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1]
Length = 311
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 170/306 (55%), Gaps = 6/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL + ++ + K P + ++ ++TKGD+I + L +IG KGLF
Sbjct: 2 KIRIGTRKSKLALWQSEWVKAQIEK--KFPDVEVELVKITTKGDKILDVPLAKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE+ ++ GE+D AVHS KD+P+KL KGL++ A+ RED RD +S +L+ L
Sbjct: 60 TKEIEEAMLRGEVDIAVHSLKDVPSKLPKGLKLIAFSDREDPRDALLSCGRYTLETLPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E+
Sbjct: 120 AVVGTSSLRRKAQLRILRPDLQIKDLRGNVDTRIRKLKEGQYDAIILAAAGVKRLGWEEE 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT-WDSVNCERAFLAELDGS 243
I EIL+ E PS QG + IE + + + +V+ + + ERAFL ++G
Sbjct: 180 IDEILSPERMIPSVCQGILGIEGREGDSEVERIVREAVNSYESEVAATVERAFLRTVEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFIS 300
C+ + +A + + +G+ +H+ + +A +IG A+ +
Sbjct: 240 CQVPLGCYAVVNEDRILVRAFISDLNGRFYHKEEGVFRFKDLREADSIGVAVAERLLSAG 299
Query: 301 NKNVFN 306
K +
Sbjct: 300 GKTILE 305
>gi|78046235|ref|YP_362410.1| porphobilinogen deaminase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|123771497|sp|Q3BXV3|HEM3_XANC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78034665|emb|CAJ22310.1| hydroxymethylbilane synthase HemC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 304
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEMLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIYSLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D +GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGQGLFLQGMVGSASDGRLIHADAHGSAEDTEALGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|83594897|ref|YP_428649.1| porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170]
gi|83577811|gb|ABC24362.1| Porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170]
Length = 321
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 126/311 (40%), Positives = 175/311 (56%), Gaps = 7/311 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIG 59
EK RIGTR SPLALA + R L+ + + I + T GD I +R L+E+G
Sbjct: 6 EKSKLRIGTRGSPLALAQTHQVRDLLIAANPDLGEPGAVTIEVIKTTGDAILDRPLSELG 65
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT EI+ +++G ID AVHS KD+PT L G+ + L RED+RD F+ L
Sbjct: 66 GKGLFTREIDDAMLAGTIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAFLGRDHARLA 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL SV+GT+SLRR A +L R DI VI FRG ++TRL+KL +A A +LA AG+ RL
Sbjct: 126 DLPEGSVVGTASLRRGAQILAMRPDIKVISFRGNVQTRLDKLARGEADATMLAIAGLNRL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+L I++ P+ QGA+ + + A + +NH T V ERAFL
Sbjct: 186 GMADKASSVLEIDEMLPAVAQGAVGVTCRAGDETAHRWLAPLNHRATQLCVEIERAFLTR 245
Query: 240 LDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
LDGSC++ I G A K T++F G+++ +DGK+ H+ +R G D I +G DA
Sbjct: 246 LDGSCRTPIGGLARLKRVEDPSGTVFFRGMIIRTDGKVIHQTTREGLAADGIALGDDAGA 305
Query: 295 YIRFISNKNVF 305
+ + F
Sbjct: 306 ELLAKAGPGFF 316
>gi|311069308|ref|YP_003974231.1| porphobilinogen deaminase [Bacillus atrophaeus 1942]
gi|310869825|gb|ADP33300.1| porphobilinogen deaminase [Bacillus atrophaeus 1942]
Length = 313
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 164/306 (53%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ L ++ P + I + TKGDRI + TL+++GGKG
Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVIKKLEEI--DPSYTFEIKEIVTKGDRILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS Q L D+
Sbjct: 59 LFVKEIEQALLNEDIDMAVHSMKDMPASLPEGLTIGCIPKREDPRDALISKRHQKLSDIK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
VIGTSSLRR A LL R D+++ RG I+TRL+KL AI+LA AG+ R+
Sbjct: 119 EGGVIGTSSLRRSAQLLVERPDLTIKWIRGNIDTRLHKLETEDYDAIILAAAGLSRMGWK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++
Sbjct: 179 DDVVTEFLEPERCLPAVGQGALAIECRESDEELLRLFSQFTDEYTKRTVLAERAFLNAME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + G+V + DGK + G D IG+ A +
Sbjct: 239 GGCQVPIAGYATINDQDEVQLTGLVASPDGKTIFKEKVAG--NDPEEIGKRCAALMSDKG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKALID 302
>gi|224008054|ref|XP_002292986.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335]
gi|220971112|gb|EED89447.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335]
Length = 330
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 123/306 (40%), Positives = 181/306 (59%), Gaps = 4/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62
P RIGTR SPLALA A+ETR L++ I I + T+GD I +++L E+GGKG
Sbjct: 9 PLRIGTRGSPLALAQAYETRRRLIENFPELEAEGAIEICVMKTQGDMILDKSLMELGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKD 120
LFT+E++ L+ E+D VHS KD+PT L +G + LPRED D FI + + + D
Sbjct: 69 LFTKELDTALLGDEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITANGDIKRIAD 128
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +SVIGT+SLRR+A +L + ++FRG ++TRL KL++ A LLA AG+KR+
Sbjct: 129 LPDNSVIGTASLRRQAQILAQNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMD 188
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IL ++ P+ QGAI I+ ++ ++ + + +N DT VNCERAFL L
Sbjct: 189 MDDCATAILEWDEMLPAVAQGAIGIQCRSDDTRSLKYIDALNCMDTHVCVNCERAFLEAL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DG+CK+ IAG A + F G++ DG + +E G DA+ IGR A + ++ +
Sbjct: 249 DGNCKTPIAGQARIVDGKIVFKGLIAMPDGSLKYETEATGEIADAVEIGRKAGEELKAQA 308
Query: 301 NKNVFN 306
+ F
Sbjct: 309 GEKFFE 314
>gi|159486921|ref|XP_001701485.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
gi|158271667|gb|EDO97482.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
Length = 349
Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats.
Identities = 132/310 (42%), Positives = 189/310 (60%), Gaps = 5/310 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60
K +IGTR SPLALA A+ TR L + I+ + T GD+I N+ L +IGG
Sbjct: 40 TKTVKIGTRGSPLALAQAYMTRDLLKKSFPELSEEGALEIVIIKTTGDKILNQPLADIGG 99
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EI+ L+SG+ID AVHS KD+PT L +G + LPRED+RDVFIS A+ L +
Sbjct: 100 KGLFTKEIDDALLSGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPVAKDLSE 159
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 160 LPAGAIVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRLD 219
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + L+I++ P+ QGAI I ++ ++ L+ +NHE+T +V CERAFL L
Sbjct: 220 MTEHITKTLSIDEMLPAVSQGAIGIACRTDDGASRNLLAALNHEETRIAVVCERAFLTAL 279
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIR 297
DGSC++ IAG+A+ L+F G+V DGK SR DA+ G +A + ++
Sbjct: 280 DGSCRTPIAGYAHKGADGMLHFSGLVATPDGKQIMRASRVVPFTEADAVKCGEEAGKELK 339
Query: 298 FISNKNVFNF 307
K +F +
Sbjct: 340 ANGPKELFMY 349
>gi|169831506|ref|YP_001717488.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator
MP104C]
gi|238058920|sp|B1I4L8|HEM3_DESAP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169638350|gb|ACA59856.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator
MP104C]
Length = 309
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 158/304 (51%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ +GTR S LALA A L + P + V + T GD I L +IG K
Sbjct: 1 MRREVVVGTRGSRLALAQADWVIDHLRARY--PRVSFVRKEIRTTGDNILEVALAKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E+ L+ EID AVHS KD+PT L +GL I A RE DVFIS + L++L
Sbjct: 59 GLFTKELEQALLHREIDLAVHSMKDLPTGLPEGLVIGAVSVREYPGDVFISRGGERLEEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR A LL +R D+ VI RG ++TRL KL+ A++LA+AG+ RL
Sbjct: 119 PAGAVLGTSSLRRTAQLLAYRPDLQVIPVRGNVQTRLRKLDEGVVDALVLAWAGLFRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + + + P+ GQGA+ IE ++ + E+++ I+H T +V ER L L+
Sbjct: 179 TERVTHRIPVAMCLPAVGQGALGIEARADDAEILEMLRTIDHAPTRAAVQAERTLLRRLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ + + L +V + DG +G +G A + +
Sbjct: 239 GGCQVPVGALGRFRDGRLVLEAVVASLDGTELVRAQESGPADRPEALGNSLAVRLLEMGA 298
Query: 302 KNVF 305
+
Sbjct: 299 GEIL 302
>gi|259417591|ref|ZP_05741510.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B]
gi|259346497|gb|EEW58311.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B]
Length = 318
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 133/306 (43%), Positives = 182/306 (59%), Gaps = 5/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L SG ID AVHS KDMPT+ +GL + YLPRED+RD F+S +++ D
Sbjct: 71 KGLFTKEIEEALTSGGIDLAVHSMKDMPTEQPEGLMLDCYLPREDVRDAFVSPQIRAIAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLQDGVASATFLAMAGLRRLN 190
Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E+V + ED P+ QGAI IE ++ A +++ I+H +T + ERAFLA
Sbjct: 191 MAEEVPATPIAPEDMLPAVAQGAIGIERRSDDTTAAAMLEAIHHAETSLRLAAERAFLAA 250
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IA A G TL G +L DG ++ D +GR + +R
Sbjct: 251 LDGSCETPIAALADLSGGTLQLRGQILRPDGSEALADQQSCAIEDGAELGRRMGEALRAR 310
Query: 300 SNKNVF 305
+ + F
Sbjct: 311 AGEGFF 316
>gi|291612739|ref|YP_003522896.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1]
gi|291582851|gb|ADE10509.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1]
Length = 314
Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 162/300 (54%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + TL++IGGKGLF
Sbjct: 12 LVIASRESALAMWQAEHIRDRLRALY--PQTSVSILGMTTQGDQILDVTLSKIGGKGLFV 69
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L +G D AVHS KD+P L +G ++ RED RD F+S+ +L L S
Sbjct: 70 KELETALENGSADIAVHSLKDVPMNLPEGFALACIGEREDPRDAFVSNRFDNLAALPAGS 129
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+KRL + I
Sbjct: 130 VVGTSSLRRESQLRARFPHLKIEPLRGNVQTRLRKLDEGQYAAIILAAAGLKRLGLGERI 189
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +++ ++ P+ GQGA+ IET + P + ++ ++H DT V ERA L GSC+
Sbjct: 190 RAVISSDESLPAVGQGALGIETRADRPDLKAVLAPLHHADTAACVLAERAMSRALAGSCQ 249
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ GFA + L G V DG G+ +G AQ + +
Sbjct: 250 VPLGGFAEVQNGKLRMRGFVATPDGTRLLRAEHVGDIAQPEALGDLVAQDLLRQGAGEIL 309
>gi|325922553|ref|ZP_08184310.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865]
gi|325546966|gb|EGD18063.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865]
Length = 304
Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 169/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + A + R D D +S+ +++
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAIMERGDAADALVSNLYATVQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L++ ++ P+P QGA+ +E ++ L+ V++ T V ERA L
Sbjct: 177 FDARITARLDVPEWLPAPAQGAVAVECRGDDAHIHGLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ D ++GR AQ +
Sbjct: 237 HGSCHVPVAAFARWEGDGLFLQGMVGSASDGRLIHAEAHGSAEDTESLGRLVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|217964297|ref|YP_002349975.1| porphobilinogen deaminase [Listeria monocytogenes HCC23]
gi|290893957|ref|ZP_06556933.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071]
gi|254800254|sp|B8DHJ2|HEM3_LISMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|217333567|gb|ACK39361.1| porphobilinogen deaminase [Listeria monocytogenes HCC23]
gi|290556495|gb|EFD90033.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071]
gi|307571137|emb|CAR84316.1| hemC [Listeria monocytogenes L99]
Length = 309
Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats.
Identities = 114/307 (37%), Positives = 168/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L
Sbjct: 59 GLFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVNALDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PHGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA ++F G+V +DG I E + G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG--ANPSEIGNKVAEDLLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 KGADTII 303
>gi|115378196|ref|ZP_01465368.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|310820650|ref|YP_003953008.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|115364784|gb|EAU63847.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
gi|309393722|gb|ADO71181.1| Porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1]
Length = 314
Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 163/305 (53%), Gaps = 3/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A + L H P ++ ++ ++T+GDR + L+ +GG
Sbjct: 1 MS-RLVRIATRQSPLALWQARHVGALLTAQH--PGLSVSLVEMTTEGDRFLSAPLSSVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ G D AVHS KDM + L +GL ++A RED RD F S T +L
Sbjct: 58 KGLFVKEIEQALLDGRADIAVHSLKDMTSVLPEGLMLAAVPVREDPRDAFCSPTGLTLDR 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR +L WR D+ ++ RG ++TRL K + +LA+AG+KRL
Sbjct: 118 LPQGARVGTSSLRRSCILRSWRKDLEIVSLRGNVQTRLQKTRDLGLAGTVLAHAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I E+L+ P+ GQG + I+ + + + L+ + T +V ERA LA+L
Sbjct: 178 LEREISEVLSPSVSLPAVGQGVLAIQCRTEDAEVRALLGPLEDAVTRVAVTAERALLAKL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G CK +AG A + ++ G V DG G +A +G A+ +
Sbjct: 238 EGGCKVPLAGHATVEQGRVHLRGFVGRPDGTQVVAGEVRGTAKEAQALGEALAEDLLSRG 297
Query: 301 NKNVF 305
+
Sbjct: 298 AGEIL 302
>gi|319785862|ref|YP_004145337.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1]
gi|317464374|gb|ADV26106.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1]
Length = 301
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 4/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL + + L H P +V++PLST+GD + +R+L IGGKGLF
Sbjct: 3 TLRIATRKSPLALWQSEHVAARLRAAH--PGLEVVLVPLSTRGDEVLDRSLAAIGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E + GE DCAVHS KD+P +L G + A L R D D F+S+ L L
Sbjct: 61 LKELEIAMERGEADCAVHSLKDVPMELEPGFVLPAVLERADPADAFVSNDFADLDALPQG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L R D+ + D RG + TRL KL+ + HAI+LA AG++RL +
Sbjct: 121 AVVGTSSLRRQAQLRARRPDLQLRDLRGNVNTRLAKLDAGEYHAIILACAGLQRLGLDAR 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L + P+P Q + E + + L+ ++ H T + ERA L GSC
Sbjct: 181 IRARLVPPQWLPAPAQAVVACECRAGDERTIGLLSLLEHAPTRAVIEAERALNRGLHGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLA-SDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+A +A TL +V + +DG G D +G A +
Sbjct: 241 HVPVAAYAELHDRTLRLQALVGSAADG-RAVRAEGEGPAADPQTLGSRLAAELLERGAGE 299
Query: 304 VF 305
Sbjct: 300 FL 301
>gi|258545718|ref|ZP_05705952.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826]
gi|258519035|gb|EEV87894.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826]
Length = 310
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 161/300 (53%), Gaps = 3/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A + L + P + ++P++T+GD+I + L IGGKGLF
Sbjct: 8 IRIATRESKLALWQAEHVAARLRAHY--PHLAVRLVPMTTRGDQILDAPLARIGGKGLFI 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ + GE D AVHS KD+ L +G +I+A LPRE+ D F+S+ SL +L +
Sbjct: 66 KELEQAMARGEADIAVHSMKDVGVHLPEGFRIAAILPRENPHDAFVSNHYASLAELPPGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT SLRR+ L R R D+ ++D RG ++TRL+KL+ AI+LA AG+ RL + I
Sbjct: 126 RVGTCSLRRRMQLARLRPDLKLLDLRGNVQTRLDKLDRGDFDAIVLACAGLIRLGLQARI 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E P+ GQGAI IE L+ ++ DT V+ ER L+GSC+
Sbjct: 186 RAELPPEQSLPAIGQGAIGIEC-HETSAVYPLLAALDDADTALCVHTERIINTHLEGSCQ 244
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A A G ++ + DG + + + R DA +G A + +++
Sbjct: 245 VPLAAHAALHGERIHLAARIGMPDGSRYLSAADDAPRRDAEALGNHIAARLIADGARDIL 304
>gi|85858418|ref|YP_460620.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB]
gi|123738772|sp|Q2LQU2|HEM3_SYNAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85721509|gb|ABC76452.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB]
Length = 306
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 2/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL + + L + P ++ I+ + T GD + L +IGGKGLF
Sbjct: 1 MKIGTRGSALALTQTRQIAARLQ--GQYPEMHLEIVVIKTSGDIQKDVPLAKIGGKGLFI 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G +D AVHS KD+P +L +GLQI+A RED RDV IS + +L +
Sbjct: 59 KEIEEALLAGTVDLAVHSMKDLPAELPEGLQIAAVPRREDPRDVLISGICREFDNLPAGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT SLRR L WR D+ ++ RG ++TR+ K+ +++A AGI+R+ + +
Sbjct: 119 RIGTGSLRRSVQLRDWRPDLEIVPLRGNLDTRIRKVAQAALDGVVVAAAGIRRMGWAEKV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQG +C+ET + + + + + T V ERAFL L G C
Sbjct: 179 TQFIPTEKMLPAVGQGVLCLETREEDEDLKAGLAFLEDKRTRREVTAERAFLRRLGGGCT 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A FA +G L G+V + + + G+ A+++G + A+ + + +
Sbjct: 239 LPVAAFAEQRGDVLTIRGMVGSLNERTMIRQEIYGSVEQAVDLGTELAERLLDGGGRILL 298
Query: 306 N 306
Sbjct: 299 E 299
>gi|94311681|ref|YP_584891.1| porphobilinogen deaminase [Cupriavidus metallidurans CH34]
gi|93355533|gb|ABF09622.1| hydroxymethylbilane synthase [Cupriavidus metallidurans CH34]
Length = 334
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 21 KLVIASRESRLAMWQAEHVRAALQQYY--PSCDVSILGMTTRGDQILDRTLSKVGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E + G D AVHS KD+P +L +G ++A + RED RD +S SL+++
Sbjct: 79 VKELEVAMSEGRADLAVHSLKDVPMELPEGFTLTAVMEREDPRDALVSAQFASLEEMPAG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 139 TVVGTSSLRREAALRSRFPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDR 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE + P+ E + +NH T +V+ ERA L GSC
Sbjct: 199 IRALIAPESSLPAAGQGALGIEIRADRPELAEWLAPLNHLPTLLAVSAERAVSRRLGGSC 258
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + ++L V DG G DA +G A +
Sbjct: 259 QVPLAAHARWRDASLQLDAFVALPDGSRQVRAHATGPVATVADAEALGTAVAGDLLAQGA 318
Query: 302 KNVF 305
V
Sbjct: 319 DGVL 322
>gi|167463591|ref|ZP_02328680.1| porphobilinogen deaminase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383221|ref|ZP_08057032.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321152490|gb|EFX45276.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 314
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 115/310 (37%), Positives = 167/310 (53%), Gaps = 9/310 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGG 60
+ +GTR S LAL + L + I + TKGDRI + TL+++GG
Sbjct: 1 MRKIVVGTRQSALALTQTGQVVDELRKRCREAGLQVEFEIRKIVTKGDRILDVTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ +++GEID AVHS KDMP +L +GL I A R+D RD ++ SL +
Sbjct: 61 KGLFVKEIEQAMLNGEIDLAVHSMKDMPFELPEGLVIGAIPERQDPRDCILTKGYVSLDE 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR + LL R D+++ RG I++RL KL + AI+LA AG+ R+
Sbjct: 121 LPQGALVGTSSLRRGSQLLHARPDLTIRSVRGNIDSRLRKLESEGFDAIVLASAGLHRMG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ I L E P+ GQGA+CIE + +L+K+I H+DT +V ERAFL L
Sbjct: 181 WEERISGYLPPEQCLPAVGQGALCIECRGGDAFVLDLLKLIQHDDTALAVRAERAFLGRL 240
Query: 241 DGSCKSAIAGFAYCK--GST---LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+G C+ + FA G T L +V + DG + +R G R +G A
Sbjct: 241 NGGCQVPLGAFASVDHSGGTEPLLTLTAMVGSPDGSKLLKETRQGTR--PEELGLQLADA 298
Query: 296 IRFISNKNVF 305
+ +
Sbjct: 299 LIGRGADRIL 308
>gi|99082369|ref|YP_614523.1| porphobilinogen deaminase [Ruegeria sp. TM1040]
gi|99038649|gb|ABF65261.1| porphobilinogen deaminase [Ruegeria sp. TM1040]
Length = 318
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 133/306 (43%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG
Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ L+SG ID AVHS KDMPT +GL + YLPRED+RD F+S S+ D
Sbjct: 71 KGLFTKEIEEALLSGGIDIAVHSMKDMPTLQPEGLTLDCYLPREDVRDAFVSPGIHSIAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL N A A LA AG++RL
Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLENGVASATFLAMAGLRRLD 190
Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E V ++++D P+ QGAI IE ++ +++ I+H +T + ERAFLA
Sbjct: 191 MAEAVPATPISVDDMLPAVAQGAIGIERRSSDITTAAMLEAIHHAETSLRLAAERAFLAA 250
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IA A G T+ G +L DG ++G D +GR + +R
Sbjct: 251 LDGSCETPIAALADLSGGTIQLRGQILRPDGSEALSDEQDGAIEDGAELGRQMGETLRAR 310
Query: 300 SNKNVF 305
+ F
Sbjct: 311 AGAGFF 316
>gi|146329177|ref|YP_001209219.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A]
gi|158513296|sp|A5EW83|HEM3_DICNV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146232647|gb|ABQ13625.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A]
Length = 305
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 156/305 (51%), Gaps = 5/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A L + P + ++P+ T+GD + + L++IGG
Sbjct: 1 MS--TLRIATRKSPLALWQAEHVAQQLKQHY--PELTVELVPIVTQGDILAHTPLSKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +E+E + D AVHS KD+ L +G ++A LPRE+ D +S+ L +
Sbjct: 57 KNLFIKELEIAMQQNAADIAVHSMKDVGVTLPEGFVLAAILPRENPFDALVSNHYAHLNE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT SLRRK L +R D+ +ID RG + TRL KL++ A++LA AG+ RL+
Sbjct: 117 LPNGARVGTCSLRRKMQLAHYRPDLKLIDIRGNVHTRLQKLDSGAFDALILACAGLIRLQ 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++IL E P+ GQGAI +E ++P ++ +NH +T V ER L
Sbjct: 177 QNARIRQILPAEISLPAIGQGAIGVECRADSPFL-AHIQTLNHFETAVCVQTERVVNQRL 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IA FA G T+ + DG+ DA G A+ +
Sbjct: 236 QGDCQVPIAVFATLSGKTMTLQSRIGTIDGQRMLAHQEICALEDAEKAGARCAEALIQQG 295
Query: 301 NKNVF 305
+++
Sbjct: 296 AQDIL 300
>gi|241667490|ref|ZP_04755068.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876036|ref|ZP_05248746.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842057|gb|EET20471.1| porphobilinogen deaminase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 300
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 168/304 (55%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL + + I + T+GD I ++ L +IGGK
Sbjct: 1 MKQIVIASRESKLALWQTNYVKDRIQQELN---IRCQINTMKTQGDIILDKPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E +++ + D AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 RGAIVGTSSLRRKAQLLHYRGDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELN 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ + + +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLIGD--NPMRLGKLLAQEMIELGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|315303323|ref|ZP_07873952.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596]
gi|313628303|gb|EFR96807.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596]
Length = 309
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 116/307 (37%), Positives = 170/307 (55%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSGWVIARLKENY--PSIDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L G ID AVHS KD+P+ L +GL I A RE D F+ +T + KDL
Sbjct: 59 GLFVSEVEQALSDGLIDFAVHSMKDVPSSLKEGLTIGAIPKRESALDCFVFNTVATFKDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A +LR R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PKGAVIGTSSLRRAAQILRKRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ + +++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDIPPELCLPAVGQGALAIECRESDQQICDMLASIHHEETGACVEAERIFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA T++F G+V SDG ++G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATKTDGTVHFKGLVGNSDGTTILSAEQSGK--NPETIGNQVAESLLS 296
Query: 299 ISNKNVF 305
++
Sbjct: 297 EGAASII 303
>gi|325918388|ref|ZP_08180519.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937]
gi|325535411|gb|EGD07276.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937]
Length = 304
Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDDPFVLPAILGRGDAADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I L+ D+ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LDARISARLDAPDWLPAPAQGAVAVECRGDDARIHALLAVLDAPTTRVCVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G LY G+V ++ +G+ D +GR AQ +
Sbjct: 237 HGSCHVPVAAFATWEGEGLYLQGMVGSASDGRLIHADAHGSAGDTEELGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|188990080|ref|YP_001902090.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. B100]
gi|229846307|sp|B0RNI9|HEM3_XANCB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167731840|emb|CAP50024.1| hydroxymethylbilane synthase [Xanthomonas campestris pv.
campestris]
Length = 304
Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L
Sbjct: 177 LEARITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ ++GR A +
Sbjct: 237 HGSCHVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRRVADGLFEKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|170738754|ref|YP_001767409.1| porphobilinogen deaminase [Methylobacterium sp. 4-46]
gi|168193028|gb|ACA14975.1| porphobilinogen deaminase [Methylobacterium sp. 4-46]
Length = 311
Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M +P RIGTR SP+ALA R + H P + ++ ++T DRI +R L+ I
Sbjct: 1 MAHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADRILDRPLSAI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I+ L R+D RD F+S + SL
Sbjct: 61 GGKGLFTKELEQALFAGEIDVAVHSMKDVETWLPDGLVIACILERDDPRDAFLSLASGSL 120
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L + +GTSSLRR A +L R D+ ++ RG TR+ KL A LLA AG++R
Sbjct: 121 AELPAGARVGTSSLRRGAQVLMRRPDLRIVPLRGNANTRIRKLEEGVCDATLLAIAGLER 180
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + + ++ +E+ P+ QGA+ IE + L++ + T ++ ER LA
Sbjct: 181 LGLAHLARTVIPVEEMLPAVAQGALGIECRAADEDVIALLQAVACPRTTTALAAERGLLA 240
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IA A G L G++ DG +R+G +A +IGR+A ++
Sbjct: 241 ELDGSCRTPIAALAQIDGDRLTLDGLLFLPDGSAHWATTRSGPAAEAASIGREAGADLKA 300
Query: 299 ISNK 302
+ +
Sbjct: 301 QAGE 304
>gi|188585750|ref|YP_001917295.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|229836110|sp|B2A1G7|HEM3_NATTJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|179350437|gb|ACB84707.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 311
Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 7/306 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL L + P I I + TKGD++ N +L+++GGKGLF
Sbjct: 2 KLRIGTRRSQLALDQTNWVVEQLKTHY--PDIEIEIKKIETKGDQLLNVSLSKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI+ L+ GEID AVHS KD+PT+ + L+I A R D D IS+ ++ +L +
Sbjct: 60 LKEIQNALLQGEIDLAVHSMKDIPTETTEDLEICAITKRVDPLDALISNNDITIDELPEN 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRR + L +R+D+ +I RG I TR+NKL + A++LA AG+ R
Sbjct: 120 AKIGTSSLRRGSQLKAYRNDLQIIPIRGNINTRMNKLQELPELDAVVLAKAGLVRSGMTD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + ++ E P PGQGA+ +E +N +E + V++ ++ ++ ERAFL L GS
Sbjct: 180 SISQNISPEIIVPCPGQGALGLEIRHDNENLKEKLAVLDDSESRKAIGAERAFLNRLGGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFI 299
C + +A + L+ G+V + DG+ + S + D +G D A+ + +
Sbjct: 240 CHVPVGAYAEIISNELHLTGVVASEDGQDVIKRSVQTHLSDNNKIPSTLGNDLAEELIEL 299
Query: 300 SNKNVF 305
+
Sbjct: 300 GANKIL 305
>gi|154686951|ref|YP_001422112.1| porphobilinogen deaminase [Bacillus amyloliquefaciens FZB42]
gi|166201493|sp|A7Z7A5|HEM3_BACA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|154352802|gb|ABS74881.1| HemC [Bacillus amyloliquefaciens FZB42]
Length = 313
Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKG
Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIREIVTKGDRILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L +
Sbjct: 59 LFVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 EGGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++
Sbjct: 179 DDVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + G+V + DGK ++ + G+ D IG+ A +
Sbjct: 239 GGCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGH--DPEEIGKRCAAMMSEKG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKALID 302
>gi|116872985|ref|YP_849766.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123466350|sp|A0AJ05|HEM3_LISW6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|116741863|emb|CAK20987.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 309
Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 7/308 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKEQY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L + ID AVHS KD+P+ L +GL I A RE D F+ + SL DL
Sbjct: 59 GLFVSEVEQALSNSTIDFAVHSMKDVPSSLEEGLVIGAIPKRESPLDCFVFNQVSSLDDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR A LL+ R D ++ RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PKGAIVGTSSLRRAAQLLKHRPDFNIRPIRGNIDTRLQKLHVENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ ++++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDIAPEVCLPAVGQGALAIECRESDQLIRDMLATIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA G ++F G+V +DG E G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATKIGEQIHFKGLVGNADGSKILESKEIG--ENPGQIGNKVAEVLLS 296
Query: 299 ISNKNVFN 306
+ +
Sbjct: 297 EGAETIIE 304
>gi|320449225|ref|YP_004201321.1| porphobilinogen deaminase [Thermus scotoductus SA-01]
gi|320149394|gb|ADW20772.1| porphobilinogen deaminase [Thermus scotoductus SA-01]
Length = 301
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 159/304 (52%), Gaps = 8/304 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +GTR S LALA L + P + + T+GD+ N +
Sbjct: 1 MRVIVVGTRGSALALAQTRFVVERLKE--SWPEAEFKVKTIKTRGDQGANPM-----EQA 53
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +E+++ L+S EID AVHS KD+PT+ GL+I+A R+D RD F+ + L+DL
Sbjct: 54 IFVKELQEALLSREIDIAVHSLKDLPTEEPPGLKIAAIPRRQDPRDAFLGKVYKRLEDLP 113
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL
Sbjct: 114 EGAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGNGEYDGIILAAAGLIRLDLR 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L
Sbjct: 174 NRIDQFLEPEVLLPAPGQGALALEVRQGDDLAEELCYALHHHPSHDRVRAERAFLKGLGA 233
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + A + TL G+VL DGK F G+ +A +G + AQ +
Sbjct: 234 GCLAPVGALAQVAEDGTLLLEGMVLTPDGKSFIRAEIEGDASEAEELGLELAQDVLEQGG 293
Query: 302 KNVF 305
+ +
Sbjct: 294 REIL 297
>gi|219117329|ref|XP_002179459.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217409350|gb|EEC49282.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 329
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 121/306 (39%), Positives = 179/306 (58%), Gaps = 4/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGK 61
+P RIGTR SPLALA A+ETR L++ I I L T+GD I +++L E+GGK
Sbjct: 7 QPLRIGTRGSPLALAQAYETRKRLIENFPDLEAEGAIEICVLKTQGDMILDKSLMELGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLK 119
GLFT+E++ L+S E+D VHS KD+PT L G + LPRED D FI + ++
Sbjct: 67 GLFTKELDTALLSDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFIYKDDSVKRIE 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
D+ SVIGT+SLRR+A L+ + ++FRG ++TRL KL++ A LLA AG+KR+
Sbjct: 127 DIPDGSVIGTASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRM 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ IL ++ P+ QGAI I+ ++ ++ + + +NH +T V+CER FL
Sbjct: 187 DMDGCATSILEWDEMLPAVAQGAIGIQCRDDDERSLKYLAALNHPETKACVDCERGFLEA 246
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDG+CK+ IAG A + F G++ DG E G +A IGR+A + ++
Sbjct: 247 LDGNCKTPIAGQARIVDGKIMFRGLIAMPDGSKKFECESEGAIEEAAKIGREAGEGLKKE 306
Query: 300 SNKNVF 305
+ + F
Sbjct: 307 AGEEFF 312
>gi|254372115|ref|ZP_04987608.1| hydroxymethylbilane synthase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569846|gb|EDN35500.1| hydroxymethylbilane synthase [Francisella novicida GA99-3549]
Length = 300
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 166/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEIAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDG + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELYNNQITLMAMVASSDGNKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|295695321|ref|YP_003588559.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912]
gi|295410923|gb|ADG05415.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912]
Length = 310
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 153/300 (51%), Gaps = 4/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ ++P + ++P++T+GDR+ + L+ +GGKGLF
Sbjct: 4 LRIGSRKSALAMTQTRWLIEQWQK--RVPGLSAEVVPMTTRGDRVLDVPLSRVGGKGLFV 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EEIE+ L+ ID AVHS KD+P +L G + A RED RD I+ + DL +
Sbjct: 62 EEIERALLEKRIDAAVHSLKDLPAQLAPGTVVGAVPRREDPRDAVITRDGRPFDDLPSGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR A L R+R D++ I RG ++TRL KL + A++LA AGI RL I
Sbjct: 122 RVGTSSLRRVAQLRRYRPDLAFIPLRGNVDTRLRKLAAGEVDAVVLAAAGILRLGLGDRI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ E P+ GQGA+ ++ + + ++ + +V ER LA L+G C+
Sbjct: 182 TEYLSPEICLPAVGQGALAVQCREADEDTRRSLESVEDAAARKTVEAERTCLAALEGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I A + + +V DG V G D +GR AA + + +
Sbjct: 242 VPIGALAEIRDGHIRLAAMVARPDGSELLRVVVQG--EDPAEVGRRAAADLLELGAGKLL 299
>gi|253995539|ref|YP_003047603.1| porphobilinogen deaminase [Methylotenera mobilis JLW8]
gi|253982218|gb|ACT47076.1| porphobilinogen deaminase [Methylotenera mobilis JLW8]
Length = 313
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 162/302 (53%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGL
Sbjct: 11 KKLVIASRESALAMWQARHIQSRLQALY--PETEVTILGMTTTGDQILDTPLAKVGGKGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L G D AVHS KD+P L +G ++A RED RD F+S+ +L+DL
Sbjct: 69 FVKELEIALADGRADLAVHSMKDVPMNLPEGFILAATGEREDPRDAFVSNDYATLEDLPA 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL+
Sbjct: 129 NSIVGTSSLRRQSQLQARFPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLELGN 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I++ + E P+ GQGA+ IE + P + +NH DT V ER L GS
Sbjct: 189 RIRQFIAPEHSIPAVGQGALGIEISADRPDLIATLAPLNHPDTQVCVEAERGMSRSLAGS 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + +A C+ ++ G V + DGK + G+R +A +G+ A +
Sbjct: 249 CTVPLGAYAVCEADSIRITGFVASVDGKQMLIETAVGSRANAEALGKTLASQLVAKGADK 308
Query: 304 VF 305
+
Sbjct: 309 IL 310
>gi|221310755|ref|ZP_03592602.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
168]
gi|221315080|ref|ZP_03596885.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319999|ref|ZP_03601293.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324281|ref|ZP_03605575.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
SMY]
Length = 313
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 167/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKG
Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 59 LFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 KGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++
Sbjct: 179 QDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG++ G + G+V + DGKI + + G D +G+ A +
Sbjct: 239 GGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTG--NDPEEVGKRCAALMADKG 296
Query: 301 NKNVFN 306
K++ +
Sbjct: 297 AKDLID 302
>gi|108761567|ref|YP_630875.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622]
gi|123374611|sp|Q1D8Z8|HEM3_MYXXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108465447|gb|ABF90632.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622]
Length = 314
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 108/300 (36%), Positives = 159/300 (53%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLAL A + L H P + ++ ++T+GDR + L+ +GGKGLF
Sbjct: 5 VRIATRQSPLALWQARHVGALLTSRH--PGLEVTLVEMTTEGDRFLSAPLSAVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G D AVHS KDM + +GL ++A RED RDVF +L L +
Sbjct: 63 KEIEQALLDGRADIAVHSLKDMTSVFPEGLILAAVPEREDPRDVFCGLGGLTLDTLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR +L R D+ ++ RG ++TRL + LLAYAG+KRL E VI
Sbjct: 123 RVGTSSLRRSCILRSRRPDVDIVSVRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L E P+ GQG + I+ ++ + + L+ + H T +V ERA LA+L+G C
Sbjct: 183 TQVLPPEVSLPAVGQGVLAIQCRTDDARVRALLVPLEHATTRIAVTAERALLAKLEGGCT 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+AG+A G T++ G+V DG G A +G A + ++
Sbjct: 243 VPLAGYATVSGDTVFLRGLVGRPDGTHVVRGEVRGPVSQAHALGESLADDLLSRGAADIL 302
>gi|312114941|ref|YP_004012537.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100]
gi|311220070|gb|ADP71438.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100]
Length = 313
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 130/310 (41%), Positives = 190/310 (61%), Gaps = 6/310 (1%)
Query: 1 MEK----KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56
M+ + RIGTR S LALA A E ++ L ++ + + T GD+I ++ L+
Sbjct: 1 MKNHSDARQIRIGTRGSALALAQATEVQNRLAAIYG-DEVKFERVVIKTTGDKILDKALS 59
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
+GGKGLFT+E+E+ L + +ID AVHS KD+ L GL+I+ LPRED+RD FIS A+
Sbjct: 60 LVGGKGLFTKELEEALFADQIDIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAK 119
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
SL D+ +VIGT+S+RR+A + R D+ + FRG +++RL KL + A A LLA AG+
Sbjct: 120 SLADMPEGAVIGTASVRREAFIKNKRPDLKTVLFRGNVQSRLKKLEDGVADATLLASAGL 179
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL I + + +ED P+P QGAI IE N+ +EL+ ++ E T +++ ERAF
Sbjct: 180 NRLGLSDRITQHIPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAF 239
Query: 237 LAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L+ELDGSC++ IA A G + F G +L DG +E +R G+ DA +G+DAAQ
Sbjct: 240 LSELDGSCRTPIAALARYDGHGRVSFKGAILTPDGARIYETTREGSANDAAAMGKDAAQE 299
Query: 296 IRFISNKNVF 305
+ K+VF
Sbjct: 300 LYARGGKDVF 309
>gi|58583630|ref|YP_202646.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
gi|75433978|sp|Q5GVL2|HEM3_XANOR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|58428224|gb|AAW77261.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 304
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGD 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+
Sbjct: 57 KGLFLKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L
Sbjct: 177 LDERISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A A +G L+ G+V ++ +G+ D ++GR AQ +
Sbjct: 237 HGSCHVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTQDLGRRVAQGLFDKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|46580299|ref|YP_011107.1| porphobilinogen deaminase [Desulfovibrio vulgaris str.
Hildenborough]
gi|55976453|sp|Q72AV0|HEM3_DESVH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46449716|gb|AAS96366.1| porphobilinogen deaminase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233718|gb|ADP86572.1| porphobilinogen deaminase [Desulfovibrio vulgaris RCH1]
Length = 315
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 2/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A +S + H ++ + + TKGD I + L ++GGKG
Sbjct: 1 MKHLVIATRGSKLALWQAEHIKSLIETEHAG-KVDVSLKIIKTKGDIILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L
Sbjct: 60 LFVKEIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL
Sbjct: 120 HGARVGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G
Sbjct: 180 APHHEVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEG 239
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG A G+V G+ + G +A N G + A +
Sbjct: 240 GCQVPIAGHAVMTGDDNFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQVLADGA 299
Query: 302 KNVFN 306
+ +
Sbjct: 300 AEILD 304
>gi|296331638|ref|ZP_06874107.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675403|ref|YP_003867075.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151233|gb|EFG92113.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413647|gb|ADM38766.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 313
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 165/306 (53%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKG
Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 59 LFVKEIEQALLNEDIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNHVKLSEMK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+VIGTSSLRR A LL R DI++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 EGAVIGTSSLRRSAQLLIERPDITIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L + P+ GQGA+ IE ++ + L E T +V ERA+L ++
Sbjct: 179 QDVVTEFLEPDRCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAYLNAME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG++ + G+V + DGKI + + G D +G+ A +
Sbjct: 239 GGCQVPIAGYSVLNEQDEIELTGLVTSPDGKIIFKETVTG--NDPEEVGKRCAALMADKG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKELID 302
>gi|315282478|ref|ZP_07870883.1| porphobilinogen deaminase [Listeria marthii FSL S4-120]
gi|313613876|gb|EFR87615.1| porphobilinogen deaminase [Listeria marthii FSL S4-120]
Length = 309
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 113/307 (36%), Positives = 170/307 (55%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 59 GLFVSEVEQALSDKAIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVSSLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PKGAVIGTSSLRRAAQLLKHRPDFIIKPIRGNIDTRLQKLHAENFDAIILAKAGLSRMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ + ++++ ++HE+T V ER FL
Sbjct: 179 LENTTLKLEDIPAELCLPAVGQGALAIECRESDQQIRDMLASVHHEETGVCVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA G ++F G+V +DG + E + G + +IG A+ +
Sbjct: 239 KLNGGCEIPIAGFAAKTGDVIHFKGLVGNADGSVILESEQTGT--NPSDIGNQVAEDLLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|16079867|ref|NP_390693.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str.
168]
gi|238054381|sp|P16616|HEM3_BACSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|143037|gb|AAA22512.1| porphobilinogen deaminase [Bacillus subtilis]
gi|2635280|emb|CAB14775.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. subtilis str. 168]
Length = 314
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 115/307 (37%), Positives = 167/307 (54%), Gaps = 6/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGK
Sbjct: 1 MMRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 59 GLFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEM 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 KKGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGW 178
Query: 182 -EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL +
Sbjct: 179 KQDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAM 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IAG++ G + G+V + DGKI + + G D +G+ A +
Sbjct: 239 EGGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTG--NDPEEVGKRCAALMADK 296
Query: 300 SNKNVFN 306
K++ +
Sbjct: 297 GAKDLID 303
>gi|89894971|ref|YP_518458.1| hypothetical protein DSY2225 [Desulfitobacterium hafniense Y51]
gi|219669373|ref|YP_002459808.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2]
gi|123091755|sp|Q24VC8|HEM3_DESHY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800248|sp|B8G2M2|HEM3_DESHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89334419|dbj|BAE84014.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539633|gb|ACL21372.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2]
Length = 308
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 122/300 (40%), Positives = 174/300 (58%), Gaps = 4/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL A + L + + P V++P+ TKGD+I + L +IG KGLFT
Sbjct: 4 VKIGTRDSQLALWQAEWVKRKLEEYY--PEREFVLVPMKTKGDKILDVPLAKIGDKGLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L++GEIDCAVHS KD+PT L GL+I+A+ RE+ RDVF+S L L S
Sbjct: 62 KELEVGLLNGEIDCAVHSLKDLPTVLPPGLEIAAFCEREEPRDVFLSKDGTPLGSLPAGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSSLRRKA L +RSD+S D RG ++TR KL + I+LA AG+KRL E I
Sbjct: 122 IIGTSSLRRKAQLQNYRSDLSFADLRGNLQTRWRKLQESDMAGIVLAAAGVKRLGWEDRI 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E + GQGAI +E +E++ ++NH DT +V ERA L L+G C+
Sbjct: 182 TEYISEEIMLSAVGQGAIAVEIAAQRADVREMLDLLNHGDTERAVKAERALLYRLEGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +A + + G+V + DG+ +V+ +G +GR AA + +
Sbjct: 242 IPIGAWAVTEQQQIVLKGMVASLDGQRILKVTLSG--EHPEELGRQAADLLIAQGALEIL 299
>gi|91774391|ref|YP_544147.1| porphobilinogen deaminase [Methylobacillus flagellatus KT]
gi|123253776|sp|Q1GXA1|HEM3_METFK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91708378|gb|ABE48306.1| hydroxymethylbilane synthase [Methylobacillus flagellatus KT]
Length = 310
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 158/302 (52%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A + L ++ P + I+ ++T GD+I + L IGGKGL
Sbjct: 5 KTLVIASRESALAMWQAQYIQGRLQTLY--PETEVTILGMTTTGDQILDSPLARIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KD+P L G ++A R+D RD F+S+ +L L
Sbjct: 63 FVKELEQALADGRADLAVHSMKDVPMHLPPGFALAAISERDDPRDAFVSNDYPNLASLPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 123 GSIVGTSSLRRQSQLQARFPGLKVESLRGNLQTRLRKLDEGQYAAIILAAAGLKRLGLAS 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+E ++ ++ P+ GQGA+ IE + +++ +NH +T V ER L GS
Sbjct: 183 RIRESIDPDNSIPAVGQGALGIEINAERLDLLKVLAPLNHPETAACVEAERGMSRALAGS 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + FA G TL G V + DGK F S G +G+ A + +
Sbjct: 243 CQVPLGAFAQQHGDTLQMTGFVASIDGKEFLRESVQGPAEQPEALGQALAAKLVALGADR 302
Query: 304 VF 305
+
Sbjct: 303 IL 304
>gi|224094087|ref|XP_002310073.1| predicted protein [Populus trichocarpa]
gi|222852976|gb|EEE90523.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 140/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHSDLAEEGAIQIVIIKTTGDKIQSQPLADIGGKGL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 175
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S+IGT+SLRRK+ +L +SV +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 176 GSIIGTASLRRKSQILHRYPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL ++D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG
Sbjct: 236 ENVTSILPLDDMLPAVAQGAIGIACRSNDDKMVNYLASLNHEETRLAVACERAFLETLDG 295
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG+ E SR G D I +G+DA + +
Sbjct: 296 SCRTPIAGYARKDENGDCIFKGLVASPDGRRVLETSRKGPYAFDDMIAMGKDAGKELLSQ 355
Query: 300 SNKNVFN 306
+ F+
Sbjct: 356 AGPGFFD 362
>gi|78357663|ref|YP_389112.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123741224|sp|Q30Y29|HEM3_DESDG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78220068|gb|ABB39417.1| hydroxymethylbilane synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 316
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A + +M + + ++ L TKGD I + L ++GGKG
Sbjct: 1 MKKIVIATRGSKLALWQAEHIKERIMQQYP-DSFEVELLVLKTKGDIILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P +L +GL + A RE D +S L L
Sbjct: 60 LFVKEIEEALLDGRADIAVHSMKDVPMELPQGLTLGAIPEREVPTDSLLSARYDGLDALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR++ +L R D+ V RG ++TR+ KL + + AI++A +G+KRL +
Sbjct: 120 QGAVVGTSSLRRQSQILAMRPDLEVKWLRGNVQTRIRKLMDGEYDAIIMATSGLKRLGET 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L F P+ GQGA+ +E + E++ ++H + V ER FL L G
Sbjct: 180 APFHSELGPPLFMPAVGQGALGLEYRSDRQDLAEMLAFLDHRPSRICVEAERGFLFGLQG 239
Query: 243 SCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A G G+V DG + G DA + G A ++
Sbjct: 240 GCQVPIAGYAVMTGDNSFELTGLVAELDGTAVIRRTAAGTEADARDTGLTLAAQVKAAGA 299
Query: 302 KNVF 305
+
Sbjct: 300 DAIL 303
>gi|120602319|ref|YP_966719.1| porphobilinogen deaminase [Desulfovibrio vulgaris DP4]
gi|158513905|sp|A1VCX6|HEM3_DESVV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120562548|gb|ABM28292.1| hydroxymethylbilane synthase [Desulfovibrio vulgaris DP4]
Length = 315
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 2/305 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A +S + H ++ + + TKGD I + L ++GGKG
Sbjct: 1 MKHLVIATRGSKLALWQAEHIKSLIETEHAG-KVDVSLKIIKTKGDIILDVPLAKVGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L
Sbjct: 60 LFVKEIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL
Sbjct: 120 HGARVGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLS 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G
Sbjct: 180 APHHEVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEG 239
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG A G+V G+ + G +A N G + A +
Sbjct: 240 GCQVPIAGHAVMTGDDDFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQVLADGA 299
Query: 302 KNVFN 306
+ +
Sbjct: 300 AEILD 304
>gi|253997747|ref|YP_003049810.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4]
gi|253984426|gb|ACT49283.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4]
Length = 320
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 155/301 (51%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF
Sbjct: 12 KLVIASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L
Sbjct: 70 VKELEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 130 SIVGTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC
Sbjct: 190 IAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A +G + +G V + DGK GN +G+ AQ + +
Sbjct: 250 TVPLGAYATKQGENITIHGFVASVDGKQMLRAEATGNAAQPELLGQQLAQSLIARGADKI 309
Query: 305 F 305
Sbjct: 310 L 310
>gi|321312347|ref|YP_004204634.1| porphobilinogen deaminase [Bacillus subtilis BSn5]
gi|320018621|gb|ADV93607.1| porphobilinogen deaminase [Bacillus subtilis BSn5]
Length = 313
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 166/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKG
Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 59 LFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 EGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++
Sbjct: 179 QDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG++ G + +V + DGKI + + G D +G+ A +
Sbjct: 239 GGCQVPIAGYSVLNGQDEIEMTALVASPDGKIIFKETVTG--NDPEEVGKRCAALMADKG 296
Query: 301 NKNVFN 306
K++ +
Sbjct: 297 AKDLID 302
>gi|284006594|emb|CBA71855.1| porphobilinogen deaminase [Arsenophonus nasoniae]
Length = 297
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 2/290 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L H P I +IP+ST+GD + + L +IGGKGLF +E+E L+
Sbjct: 1 MWQAIFVKTQLEKHH--PTLTIELIPMSTQGDILLDTPLAKIGGKGLFVKELENALLENR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L + A R D RD F+S+ SL L S+IGTSSLRR+
Sbjct: 59 ADIAVHSIKDIPATFPNNLGLMAICQRGDPRDAFVSNQYDSLDALPAGSIIGTSSLRRQC 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L + + D RG + TRL+KL+N + I+LA AG+KRL E I+ L E P
Sbjct: 119 QLRHTYPHLVIQDLRGNVGTRLSKLDNGQYDGIILAVAGLKRLNLETRIRMPLPPEHSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGAI IE +++ Q + ++H DT + ER L G C+ I +A +
Sbjct: 179 AVGQGAIGIECRLDDHHTQHFLAPLHHHDTAICIQAERTVNNRLQGGCQVPIGSYAIWQN 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
++ +V DG R+ DA + + A+ + K + N
Sbjct: 239 KQIWLRALVGTPDGSQIIRGERSFKPEDAQQMSIELAEELLNNGAKQILN 288
>gi|304309752|ref|YP_003809350.1| Porphobilinogen deaminase [gamma proteobacterium HdN1]
gi|301795485|emb|CBL43683.1| Porphobilinogen deaminase [gamma proteobacterium HdN1]
Length = 311
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 120/305 (39%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR S LAL A R+ L+ H P ++ II ++TKGD+I + L +IGG
Sbjct: 1 MSNHRIRIATRESALALWQAEHVRACLLAAH--PGLDVEIIGMTTKGDKILDTPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P +GL +S L RED RD F+S+ +L
Sbjct: 59 KGLFVKELEVAMLEGIADIAVHSMKDVPVDFPEGLGLSVILEREDPRDAFVSNQYDTLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GT SLRR+ L R DI +++ RG + +RL KL+ + AILLA AG+KRL
Sbjct: 119 LPLGARVGTCSLRRQTQLRARRPDIEILELRGNVNSRLAKLDAGQFDAILLAAAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ P+ GQGAI IE ++ + L+ +NH DT V+ ERA L
Sbjct: 179 FHERIRATLDPAASLPAVGQGAIGIECRTDDARTLALLAPLNHPDTHTCVSAERAMNHRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A G LY G+V DG G R DA +G A +
Sbjct: 239 QGGCQVPIAGYAELHGDQLYMRGLVGEPDGSRILRAEIRGARADAAALGAALADDLLAQG 298
Query: 301 NKNVF 305
K +
Sbjct: 299 AKEIL 303
>gi|212638453|ref|YP_002314973.1| porphobilinogen deaminase [Anoxybacillus flavithermus WK1]
gi|212559933|gb|ACJ32988.1| Porphobilinogen deaminase (hydroxymethylbilane synthase)
[Anoxybacillus flavithermus WK1]
Length = 313
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 157/306 (51%), Gaps = 5/306 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +G+R S LAL L + P + + TKGD+I + TL+++GGK
Sbjct: 5 MMRKIIVGSRRSKLALTQTNWVIEQLKQLGA--PFEFEVKEIVTKGDQILHVTLSKVGGK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ ++ GEID AVHS KDMP L GL I RED RDV IS + L
Sbjct: 63 GLFVKEIEQAMLDGEIDFAVHSMKDMPAVLPDGLVIGCVPKREDHRDVLISKGHIPFEQL 122
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+
Sbjct: 123 PSGAIVGTSSLRRSAQLLAVRPDLQIQWIRGNIDTRLAKLQTDAYDAIILAAAGLHRMGW 182
Query: 182 EKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I + L + P+ GQGA+ IE N+ + + + + T + ERAFL +
Sbjct: 183 AKEVITQYLPTDICVPAVGQGALAIECRENDAELLHWLNKLTDKQTERATRAERAFLQHI 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ +AG+AY + +V +G + G + +G +AA+ +
Sbjct: 243 EGGCQVPVAGYAYVDEDAIVLTALVATPNGTEVLKEVVKGT--EPEKVGTEAAKRLIERG 300
Query: 301 NKNVFN 306
K +
Sbjct: 301 AKQLIE 306
>gi|317052496|ref|YP_004113612.1| porphobilinogen deaminase [Desulfurispirillum indicum S5]
gi|316947580|gb|ADU67056.1| porphobilinogen deaminase [Desulfurispirillum indicum S5]
Length = 308
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 162/304 (53%), Gaps = 7/304 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL A ++ L + + + + TKGD+I + L ++GGKGLF
Sbjct: 2 KIVIGTRASQLALWQAEHIKAELES--RWDDVQVELKKIITKGDKILDSPLAKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD--LA 122
+EIE +LI G ID AVHS KD+PT+ +GL++ A RED RD FIS +S+ +
Sbjct: 60 VKEIENELIDGTIDIAVHSMKDVPTEFPEGLELFAITEREDPRDAFISRNGKSMAELGQQ 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IGTSSLRR+A LL +++ RG ++TRL ++ + I+LA AG+KRL+ E
Sbjct: 120 KDVTIGTSSLRRQAQLLTLYPHWNIVSIRGNVQTRLKRMEERQMDGIILAAAGMKRLELE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++KE + E P+ GQGA+ +E + +E ++ + H T V ERA L ++G
Sbjct: 180 HLVKEYIAPEVMIPAIGQGALGLEVRSADTALKERLEFLRHPVTTQCVLAERALLRTMEG 239
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I +A + +++ +V + DGK + G + +G A +
Sbjct: 240 GCQVPIGAYAVPKENGSVFLNALVASVDGKEVVKGQLEG--NNPEELGVTLANQMLNSGA 297
Query: 302 KNVF 305
+ +
Sbjct: 298 RAIL 301
>gi|163854244|ref|YP_001642287.1| porphobilinogen deaminase [Methylobacterium extorquens PA1]
gi|163665849|gb|ABY33216.1| porphobilinogen deaminase [Methylobacterium extorquens PA1]
Length = 309
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 122/307 (39%), Positives = 174/307 (56%), Gaps = 4/307 (1%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIG
Sbjct: 1 MSLSRALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSL 118
GKGLFT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + A L
Sbjct: 59 GKGLFTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL + +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++R
Sbjct: 119 ADLPPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LA
Sbjct: 179 LGMADVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IA A KG + G++ DG V R G DA IGRDA ++
Sbjct: 239 ELDGSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWAVHREGLAADADTIGRDAGAELKR 298
Query: 299 ISNKNVF 305
+ F
Sbjct: 299 AAGDVYF 305
>gi|21232940|ref|NP_638857.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766987|ref|YP_241749.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. 8004]
gi|23821678|sp|Q8P536|HEM3_XANCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81307026|sp|Q4UYZ4|HEM3_XANC8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21114777|gb|AAM42781.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66572319|gb|AAY47729.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris
str. 8004]
Length = 304
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 4/305 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG
Sbjct: 1 MT--TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+
Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL
Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L
Sbjct: 177 LEARITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRAL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC +A FA +G L+ G+V ++ +G+ ++GR A +
Sbjct: 237 HGSCHVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRLVADGLFEKG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AAQLL 301
>gi|224499785|ref|ZP_03668134.1| porphobilinogen deaminase [Listeria monocytogenes Finland 1988]
Length = 309
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 115/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 59 GLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA + F G+V +DG I E + G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATRANEVVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|15615608|ref|NP_243912.1| porphobilinogen deaminase [Bacillus halodurans C-125]
gi|11386834|sp|Q9K8G0|HEM3_BACHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|10175668|dbj|BAB06765.1| porphobilinogen deaminase [Bacillus halodurans C-125]
Length = 311
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 164/306 (53%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG+R S LAL S L + P + I + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIIGSRRSQLALTQTEWVISKLKEAGA--PFDFEIKKIITKGDQILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ + + EID AVHS KD+P+ L +G + A R D RD IS+ +L +L
Sbjct: 59 LFVKEIEQAMANKEIDIAVHSMKDVPSVLQEGFALGATTTRVDPRDALISNEGYTLAELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A +L R D+ V RG IETRL KL AI+LA AG++R+
Sbjct: 119 AGSIVGTSSLRRSAQILAKRPDLEVKWIRGNIETRLRKLKEEDFDAIILAAAGLERMGWS 178
Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ + P+ GQGA+ IE ++ + E++K IN + T +V ER FL ++
Sbjct: 179 NEIVTEYLDPDLCVPAVGQGALGIECRADDDEVLEMLKTINDDTTAKTVLAERTFLHRME 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + +V DG+ + G D + +G AQ +
Sbjct: 239 GGCQVPIAGYATLTDEGEIELTALVGTPDGEQIFKEILRGK--DPVQLGETMAQALMDQG 296
Query: 301 NKNVFN 306
K V
Sbjct: 297 AKEVLE 302
>gi|89098939|ref|ZP_01171819.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911]
gi|89086343|gb|EAR65464.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911]
Length = 311
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + + + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWVMDQLKKIDD--SFEFEVKEIVTKGDQILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ EID AVHS KDMP L +GL I + RED RD IS Q+L L
Sbjct: 59 LFVKEIEQAMLDEEIDMAVHSMKDMPAVLPEGLVIGSIPEREDHRDALISKGHQTLDQLK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+
Sbjct: 119 PGAVVGTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLETEEYDAIILAAAGLSRMGWT 178
Query: 183 KVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E L E P+ GQGA+ IE ++ + EL+ T +V ERAFL +++
Sbjct: 179 TDTVSEFLEPEVCLPAVGQGALSIECRESDKELLELLSKFTCGTTNQTVRAERAFLHKME 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + G+V + DGK ++ G D + +G A+ +
Sbjct: 239 GGCQVPIAGYAVLNEKDEIELTGLVASPDGKTIYKEKVTG--ADPVEVGLRTAEKLIEKG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKKLID 302
>gi|148654060|ref|YP_001281153.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1]
gi|148573144|gb|ABQ95203.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1]
Length = 339
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 168/323 (52%), Gaps = 21/323 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K I TR SPLA+ A ++ L ++ P + ++ + T+GD+I + L +IGGK
Sbjct: 9 SLKTLNIATRKSPLAMWQAEHIKARLESLY--PDLEVNLVTMVTQGDKILDTPLAKIGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E+ L G D AVHS KD+P L +GL + Y RE D F+S+T SL L
Sbjct: 67 GLFVKELEQALYDGRADIAVHSLKDVPMVLPEGLILGTYCKRETPTDAFVSNTYDSLDAL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GT+SLRR+ + R D+ + RG ++TRL+KL+ + AI+LA +G+KR++
Sbjct: 127 PQGAVVGTASLRRQCQIKAHRPDLIIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVEL 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
IK+ ++I+ P+ GQGA+ IE ++ L+K +N + ERA L+
Sbjct: 187 SDRIKQEIDIDISLPAVGQGALAIECRSDDDAVLSLLKPLNDGQARIRLMAERALNRRLE 246
Query: 242 GSCKSAIAGFAYCK-----------GSTLYFYGIVLASDGKIFHEVSRN----GNRCD-- 284
G C+ IA FA + TL+ G V + DG + + GN+ D
Sbjct: 247 GGCQVPIAAFAVIEKGAENDDTGSHNKTLWLRGRVGSEDGTTLLKADKRIALMGNQADRE 306
Query: 285 --AINIGRDAAQYIRFISNKNVF 305
A +G D A + + +
Sbjct: 307 AQAEQLGIDVADELLSLGADGIL 329
>gi|315645740|ref|ZP_07898864.1| porphobilinogen deaminase [Paenibacillus vortex V453]
gi|315279218|gb|EFU42528.1| porphobilinogen deaminase [Paenibacillus vortex V453]
Length = 318
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 110/315 (34%), Positives = 170/315 (53%), Gaps = 14/315 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60
+ +G+R S LAL + L + K + + + TKGDRI + TL+++GG
Sbjct: 1 MRTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLDYDFTVKKIVTKGDRILDVTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ ++ GEID AVHS KDMP+ L +GL A R+D RD IS +L D
Sbjct: 61 KGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGATLDD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+
Sbjct: 121 LPQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIVLATAGLQRMG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL
Sbjct: 181 WEDRITSHLPVEISLPAVGQGALGIECRENDSELLHLLSLYNDEVTARTVAAERKFLSEL 240
Query: 241 DGSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+G C+ I +A K + + G+V + DG+I + S G D ++G
Sbjct: 241 NGGCQVPIGAYAILKNVDTGDSRGEQNVIQLTGMVGSPDGEIILKESAEGT--DPESLGV 298
Query: 291 DAAQYIRFISNKNVF 305
+ A ++ + +
Sbjct: 299 EVAAKLKAKGAEKIL 313
>gi|291485230|dbj|BAI86305.1| porphobilinogen deaminase [Bacillus subtilis subsp. natto BEST195]
Length = 314
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 115/307 (37%), Positives = 167/307 (54%), Gaps = 6/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGK
Sbjct: 1 MMRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFVFEIKEIVTKGDRIVDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++
Sbjct: 59 GLFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEM 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 KEGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGW 178
Query: 182 -EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL +
Sbjct: 179 KQDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAM 238
Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IAG++ G + G+V + DGKI + + G D +G+ A +
Sbjct: 239 EGGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTG--NDPEEVGKRCAALMADR 296
Query: 300 SNKNVFN 306
K++ +
Sbjct: 297 GAKDLID 303
>gi|302838564|ref|XP_002950840.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f.
nagariensis]
gi|300263957|gb|EFJ48155.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f.
nagariensis]
Length = 355
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 137/310 (44%), Positives = 191/310 (61%), Gaps = 5/310 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60
K +IGTR SPLALA A+ TR L + I+ + T GD+I N+ L +IGG
Sbjct: 46 TKTVKIGTRGSPLALAQAYLTRDLLKKNFPELNEEGALEIVIIKTTGDKILNQPLADIGG 105
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EI+ L+ G+ID AVHS KD+PT L +G + LPRED+RDVFIS TA+ L +
Sbjct: 106 KGLFTKEIDDALLGGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPTAKDLSE 165
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 166 LPAGAVVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRLD 225
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +IL+IE+ P+ QGAI I + +++L+ +NHE+T +V CERAFLA L
Sbjct: 226 MTAHITKILSIEEMLPAVSQGAIGIACRTQDDASRKLLAALNHEETRIAVVCERAFLAAL 285
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIR 297
DGSC++ IAG+A+ L+F G+V DGK SR + DA+ G DA + ++
Sbjct: 286 DGSCRTPIAGYAHKGSDGQLHFSGLVATPDGKQMMRTSRVASFTDADAVKAGEDAGRELK 345
Query: 298 FISNKNVFNF 307
K +F +
Sbjct: 346 ATGPKELFMY 355
>gi|298292774|ref|YP_003694713.1| porphobilinogen deaminase [Starkeya novella DSM 506]
gi|296929285|gb|ADH90094.1| porphobilinogen deaminase [Starkeya novella DSM 506]
Length = 309
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 124/300 (41%), Positives = 176/300 (58%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLAL A R +L+ H P + + + T GD IT+R L+E GGKGLFT
Sbjct: 8 LRLGTRGSPLALWQAHAVRDALVKAHGWAPEAVEVQVIRTTGDAITDRALSEAGGKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ ID AVHSAKDM TKL GL + YLPR D+RD I SL DL +
Sbjct: 68 KELEEALLDRRIDLAVHSAKDMATKLPDGLHLVGYLPRADVRDALILREGSSLADLKPGA 127
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRR+A L R R D+ V RG + TRL+K+ + + LLA AG+ RL
Sbjct: 128 KVGTASLRREAQLRRLRPDLQVSLLRGNVHTRLSKVESGEFDGTLLALAGLTRLGMADKA 187
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L++ DF P+ GQGA+ IE+ + L+ + T ++ ERA+L ELDGSC+
Sbjct: 188 SALLDVADFLPAVGQGAVAIESRFGDIAVDALLVPVTCPATGLALRVERAYLGELDGSCR 247
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ I G A +G + F G+VL+ DG ++E+ R G A+ +G A Q +R + ++
Sbjct: 248 TPIGGLAEVQGEEIRFRGVVLSPDGSRYYEIVRYGPANRALELGLAAGQEMRAMVPADLL 307
>gi|327439433|dbj|BAK15798.1| porphobilinogen deaminase [Solibacillus silvestris StLB046]
Length = 310
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 113/300 (37%), Positives = 168/300 (56%), Gaps = 5/300 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L + P + + + TKGDRI + L+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFINELKEAGV--PFDFEVKEIVTKGDRILDVQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS+ DL
Sbjct: 59 LFVKEIEQALYDKEIDFAVHSMKDMPAVLPEGLIIGCIPPREDARDAFISNGHVKFADLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+++GTSSLRR A LL+ R D+ + RG ++TRL KL AI+LA AG+KRL
Sbjct: 119 KGAIVGTSSLRRSAQLLQARPDLEIKWIRGNVDTRLKKLETEDFDAIILAAAGLKRLGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++V+ E L+ + P+ QG++ IE ++ + E + + TW + + ER+FLA +D
Sbjct: 179 DEVVTEYLDTDICLPAVAQGSLGIECRADDTELLEQLTKLTDATTWATAHAERSFLAAMD 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A +G T+ G+V A D + ++ + G DA +G+ A +
Sbjct: 239 GGCQVPIAGYATVEGDTITLTGLVAAPDASVTYKETLTGT--DADAVGKAVAAKLTEQGA 296
>gi|313608617|gb|EFR84478.1| porphobilinogen deaminase [Listeria monocytogenes FSL F2-208]
Length = 309
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 113/307 (36%), Positives = 166/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L
Sbjct: 59 GLFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQMNALDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PHGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLXXXXPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA ++F G+V +DG I E + G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG--ANPSEIGNKVAEDLLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 KGADTII 303
>gi|16803596|ref|NP_465081.1| porphobilinogen deaminase [Listeria monocytogenes EGD-e]
gi|47096721|ref|ZP_00234306.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854]
gi|224501504|ref|ZP_03669811.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-561]
gi|254831957|ref|ZP_05236612.1| porphobilinogen deaminase [Listeria monocytogenes 10403S]
gi|254898277|ref|ZP_05258201.1| porphobilinogen deaminase [Listeria monocytogenes J0161]
gi|254912230|ref|ZP_05262242.1| porphobilinogen deaminase [Listeria monocytogenes J2818]
gi|254936558|ref|ZP_05268255.1| porphobilinogen deaminase [Listeria monocytogenes F6900]
gi|284801947|ref|YP_003413812.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578]
gi|284995089|ref|YP_003416857.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923]
gi|23821694|sp|Q8Y6X5|HEM3_LISMO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|16410985|emb|CAC99634.1| hemC [Listeria monocytogenes EGD-e]
gi|47014905|gb|EAL05853.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854]
gi|258609152|gb|EEW21760.1| porphobilinogen deaminase [Listeria monocytogenes F6900]
gi|284057509|gb|ADB68450.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578]
gi|284060556|gb|ADB71495.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923]
gi|293590205|gb|EFF98539.1| porphobilinogen deaminase [Listeria monocytogenes J2818]
Length = 309
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 115/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 59 GLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA + F G+V +DG I E + G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|254828209|ref|ZP_05232896.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165]
gi|258600598|gb|EEW13923.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165]
Length = 309
Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats.
Identities = 116/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L KGL I A RE D F+ + SL +L
Sbjct: 59 GLFVSEVEQALSDEAIDFAVHSMKDVPSSLKKGLIIGAIPKRESPLDCFVFNQVNSLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA + F G+V +DG I E + G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|289434836|ref|YP_003464708.1| hypothetical protein lse_1471 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171080|emb|CBH27622.1| hemC [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 309
Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats.
Identities = 115/307 (37%), Positives = 169/307 (55%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T +S DL
Sbjct: 59 GLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVESFHDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R+
Sbjct: 119 PTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA + F G+V +DG R G + + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTG--ENPMTIGNQVAEALLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|254440462|ref|ZP_05053956.1| porphobilinogen deaminase [Octadecabacter antarcticus 307]
gi|198255908|gb|EDY80222.1| porphobilinogen deaminase [Octadecabacter antarcticus 307]
Length = 321
Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 174/305 (57%), Gaps = 4/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ LM + + + T GD + L IG
Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMVAFDLAEAAFEVCVIKTTGDDRSLIDADIPLKVIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++G+ID AVHS KDMP GL + +LPRED RD F+S + D
Sbjct: 71 KGLFTKEIEEAMLAGQIDIAVHSTKDMPVAQPDGLVLDVFLPREDARDAFVSVKYSGIPD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ R+
Sbjct: 131 LPEGAIVGTSSLRRRAQLLAKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +++ D P+ QG I IE +++ +A++++ I+ + ER+FLA L
Sbjct: 191 MDDAAMGAIDLADMLPAIAQGTISIERRIDDLRARDMLAAIHDVQAGQQMAAERSFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G ++ G +L DG R G + +G++ AQ + +
Sbjct: 251 DGSCETPIAGLAMIDGDNMWLRGEILKPDGSQVFTGERRGLVTEGRAMGKELAQELLGQA 310
Query: 301 NKNVF 305
+ F
Sbjct: 311 GPDFF 315
>gi|313633107|gb|EFS00005.1| porphobilinogen deaminase [Listeria seeligeri FSL N1-067]
Length = 309
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 115/307 (37%), Positives = 168/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T S DL
Sbjct: 59 GLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVGSFHDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R+
Sbjct: 119 PTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA + F G+V +DG R G + + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTG--ENPMTIGNQVAEALLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|255521282|ref|ZP_05388519.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-175]
Length = 309
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 114/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 59 GLFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVINPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA ++F G+V +DG I + G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|2495180|sp|Q43082|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|313724|emb|CAA51820.1| hydroxymethylbilane synthase [Pisum sativum]
Length = 369
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 141/307 (45%), Positives = 189/307 (61%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 62 IRIGTRGSPLALAQAHETRDKLMASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPA 181
Query: 124 HSVIGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ + R+ S +FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 182 GSVIGTASLRRKSQILHRYPSLTVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMT 241
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + L+I+D P+ QGAI I N+ K E + +NHE+T +++CERAFL LDG
Sbjct: 242 ENVTSTLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDG 301
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A K F G+V + DG E SR G+ D + IG+DA + +
Sbjct: 302 SCRTPIAGYASRDKDGNCLFRGLVASPDGTRVLETSRIGSYTYEDMMKIGKDAGEELLSR 361
Query: 300 SNKNVFN 306
+ FN
Sbjct: 362 AGPGFFN 368
>gi|261405370|ref|YP_003241611.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10]
gi|329928511|ref|ZP_08282379.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5]
gi|261281833|gb|ACX63804.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10]
gi|328937770|gb|EGG34178.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5]
Length = 318
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 168/315 (53%), Gaps = 14/315 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60
+ +G+R S LAL + L + K + + TKGDRI + TL+++GG
Sbjct: 1 MRTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLEYDFAVKKIVTKGDRILDVTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ +I GEID AVHS KDMP+ L +GL A R+D RD IS +L D
Sbjct: 61 KGLFVKEIEQAMIDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGTTLDD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+
Sbjct: 121 LPQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIILATAGLQRMG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL
Sbjct: 181 WEDRITSYLPVEVSLPAVGQGALGIECRENDEELLHLLSLYNDEVTARTVAAERKFLSEL 240
Query: 241 DGSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+G C+ I +A K + + G+V + DG+I + S G D +G
Sbjct: 241 NGGCQVPIGAYAVMKNVEAGDSRGEQNVIQLTGMVGSPDGEIVLKESAEGT--DPEALGV 298
Query: 291 DAAQYIRFISNKNVF 305
+ A ++ + +
Sbjct: 299 EVAAKLKAKGAEKIL 313
>gi|325294749|ref|YP_004281263.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065197|gb|ADY73204.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 311
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 174/306 (56%), Gaps = 6/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL + + + K P + +I ++TKGD+I + L +IG KGLF
Sbjct: 2 KIRIGTRKSKLALWQSEWVKEQIEK--KFPEVEVELIKITTKGDKILDVPLAKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE ++ GE+D AVHS KD+P+KL +GL++ A+ RED RD +S +L L
Sbjct: 60 TKEIEDAMLKGEVDIAVHSLKDVPSKLPEGLKLIAFSDREDPRDALLSCGKYTLDTLPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E
Sbjct: 120 AVVGTSSLRRKAQLRILRPDLEIRDLRGNVDTRIRKLKEEQYDAIILAAAGVKRLGWENE 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243
I EIL+ + PS QG + IE ++P+ + +VK IN ++ + ERAFL ++G
Sbjct: 180 IDEILSSDKMIPSVSQGILGIEGREDDPEIERIVKEAINSRESEIAATVERAFLRTVEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300
C+ + +A + ++ + +G+ +++ + N +A +G A+ +
Sbjct: 240 CQVPLGCYAVVVENRVHVRAFISDLNGRFYYKEEGVFKVENLEEADMVGTGVAERLLSAG 299
Query: 301 NKNVFN 306
K + +
Sbjct: 300 GKKILD 305
>gi|303274460|ref|XP_003056550.1| porphobilinogen deaminase, chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226462634|gb|EEH59926.1| porphobilinogen deaminase, chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 376
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 123/305 (40%), Positives = 180/305 (59%), Gaps = 4/305 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
+IGTR SPLALA A+ TR L + I + T GD++ ++ L +IGGKGL
Sbjct: 63 VKIGTRGSPLALAQAYMTRDLLKKNFVELSEEGALEICIIKTTGDKVLDQPLADIGGKGL 122
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L
Sbjct: 123 FTRELDVALLDGRIDIAVHSMKDVPTYLPEGSILPCMLPREDVRDAFISVKYDDLSELPD 182
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ +
Sbjct: 183 GALVGTASLRRQSQLLAKFPTLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMTE 242
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+IL + P+ QGAI I + + E ++ +NHE+T +V CERAFLA LDGS
Sbjct: 243 HATKILETDVMLPAVAQGAIGIACRTGDSRQLEFLEKLNHEETRIAVECERAFLASLDGS 302
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISN 301
C++ IAG+AY G+ L F G+V + DGK E +R+ N DAI+ G+DA ++ ++
Sbjct: 303 CRTPIAGYAYKSGNNLEFRGLVASLDGKQILETTRSSNWSFTDAIDAGKDAGNELKALAP 362
Query: 302 KNVFN 306
F
Sbjct: 363 SEFFE 367
>gi|194707246|gb|ACF87707.1| unknown [Zea mays]
gi|223947939|gb|ACN28053.1| unknown [Zea mays]
Length = 356
Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats.
Identities = 131/306 (42%), Positives = 183/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300
C++ IA +AY F G++ + DG E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|124514859|gb|EAY56370.1| Porphobilinogen deaminase [Leptospirillum rubarum]
Length = 314
Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats.
Identities = 113/310 (36%), Positives = 162/310 (52%), Gaps = 7/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P +IG+R S LAL A S + V + P I+ + T GD I +R L+E+GG
Sbjct: 1 MLPTPLKIGSRGSELALWQARHVASLIESVSGVLP---EIVVIKTTGDIILDRQLSEVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K
Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLTREDPRDVFLSPHYPDIKS 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR A + R+D+ I RG + TR+ K+ AI+LA AG+ RL
Sbjct: 118 LPQKARVGTSSLRRLAQIREIRNDLEFIPLRGNVGTRIRKMEEGVVDAIILAGAGLLRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++E ++ P+ GQGA+ +E ++ LV+ ++ E T SV ER L L
Sbjct: 178 HANRVREWISPRVLLPAIGQGALGLEIRTDDETTGTLVRSLSDESTHLSVAAERGVLQSL 237
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYI 296
+G C+ IA +A + + TL G VL G + DA +G D +
Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIVTIDDAYQMGIDLGNRL 297
Query: 297 RFISNKNVFN 306
+ + N
Sbjct: 298 LSDGAEEILN 307
>gi|119357593|ref|YP_912237.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266]
gi|158512603|sp|A1BHD6|HEM3_CHLPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119354942|gb|ABL65813.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266]
Length = 313
Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats.
Identities = 118/308 (38%), Positives = 171/308 (55%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L + P +I + + T GD + + L++IG
Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSRHY--PELDITLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS + ++L +L
Sbjct: 59 GLFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISRSGETLLNL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RLK
Sbjct: 119 PQNARIATSSLRRMSQLLSMRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLKF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL + P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L
Sbjct: 179 SDRISEILPHDVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297
G C+ I +A K TL V + +GKI + A G + A+ +
Sbjct: 239 GGCQIPIGAYASFKNGTLKLLAFVGSVNGKIGLRNEITKTGLVSPEQAEEAGIELAKELL 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 KQGADEIL 306
>gi|71083016|ref|YP_265735.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062129|gb|AAZ21132.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 307
Score = 245 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 174/302 (57%), Gaps = 1/302 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIG 59
M+ + IG+R S LAL +A + R ++ K ++I + TKGD++ ++ L+E+G
Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK
Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L
Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L
Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C++A+ FA +G+ + + + DG + + + A +G + + ++ +
Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVNKAEELGIEMGKTLKKM 300
Query: 300 SN 301
SN
Sbjct: 301 SN 302
>gi|91762559|ref|ZP_01264524.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718361|gb|EAS85011.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 307
Score = 245 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 174/302 (57%), Gaps = 1/302 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIG 59
M+ + IG+R S LAL +A + R ++ K ++I + TKGD++ ++ L+E+G
Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK
Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L
Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L
Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C++A+ FA +G+ + + + DG + + + A +G + + ++ +
Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVDKAEELGIEMGKTLKKM 300
Query: 300 SN 301
SN
Sbjct: 301 SN 302
>gi|254366979|ref|ZP_04983015.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica 257]
gi|134252805|gb|EBA51899.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Francisella tularensis subsp. holarctica 257]
Length = 300
Score = 245 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I + S LAL ++ + IP I + T+GD I ++ L +IGGK
Sbjct: 1 MKQITIASGESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL
Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+
Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G
Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C AI +A + + +V +SDGK + G+ D +G+ AQ + +
Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295
Query: 303 NVFN 306
+
Sbjct: 296 KILE 299
>gi|46907786|ref|YP_014175.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093092|ref|ZP_00230869.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858]
gi|226224157|ref|YP_002758264.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria
monocytogenes Clip81459]
gi|254824385|ref|ZP_05229386.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194]
gi|254852180|ref|ZP_05241528.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503]
gi|254931496|ref|ZP_05264855.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262]
gi|254993453|ref|ZP_05275643.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-064]
gi|300764778|ref|ZP_07074768.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017]
gi|55976452|sp|Q71ZB2|HEM3_LISMF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|259647801|sp|C1KVK3|HEM3_LISMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46881055|gb|AAT04352.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018532|gb|EAL09288.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858]
gi|225876619|emb|CAS05328.1| Putative porphobilinogen deaminase (hydroxymethylbilane synthase)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|258605484|gb|EEW18092.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503]
gi|293583048|gb|EFF95080.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262]
gi|293593620|gb|EFG01381.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194]
gi|300514454|gb|EFK41511.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017]
gi|328465591|gb|EGF36820.1| porphobilinogen deaminase [Listeria monocytogenes 1816]
gi|332311998|gb|EGJ25093.1| Porphobilinogen deaminase [Listeria monocytogenes str. Scott A]
Length = 309
Score = 245 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 114/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L
Sbjct: 59 GLFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+
Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL
Sbjct: 179 LENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C+ IAGFA ++F G+V +DG I + G + IG A+ +
Sbjct: 239 KLNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLS 296
Query: 299 ISNKNVF 305
+
Sbjct: 297 EGADTII 303
>gi|206603978|gb|EDZ40458.1| Porphobilinogen deaminase [Leptospirillum sp. Group II '5-way CG']
Length = 314
Score = 245 bits (624), Expect = 9e-63, Method: Composition-based stats.
Identities = 113/310 (36%), Positives = 164/310 (52%), Gaps = 7/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P +IG+R S LAL A S + V I P I+ + T GD I +R L+E+GG
Sbjct: 1 MSLMPLKIGSRGSELALWQARHVASMIESVSGILP---EIVVIKTTGDIILDRQLSEVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K
Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLKREDPRDVFLSPHYPDIKS 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR A + +RSD+ I RG + TR+ K+ + AI+LA AG+ RL
Sbjct: 118 LPHKARVGTSSLRRLAQIREFRSDLEFIPLRGNVGTRIRKMEDGVVEAIILAGAGLLRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++E ++ + P+ GQGA+ +E ++ L++ ++ E T SV ER L L
Sbjct: 178 HANRVREWISPQVLLPAIGQGALGLEIRTDDETTGTLIRSLSDESTHLSVAAERGVLQSL 237
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYI 296
+G C+ IA +A + + TL G VL G +A +G D +
Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIATIDEAYQMGMDLGNRL 297
Query: 297 RFISNKNVFN 306
+ + N
Sbjct: 298 LADGAEEILN 307
>gi|170749246|ref|YP_001755506.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831]
gi|170655768|gb|ACB24823.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831]
Length = 307
Score = 245 bits (624), Expect = 9e-63, Method: Composition-based stats.
Identities = 122/291 (41%), Positives = 174/291 (59%), Gaps = 2/291 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P RIGTR SP+ALA R ++ + P ++ ++T D+I +R L+EIGG
Sbjct: 1 MLNRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETELVVVTTVADKILDRPLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L +GE+D AVHS KD+ T L GL I+ L R+D RD F+S A L
Sbjct: 59 KGLFTKELEQALFAGEVDVAVHSMKDVETWLPDGLTIACILERDDPRDAFLSPHADGLAG 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA + +GTSSLRR A +L R D+ V+ RG TR+ KL + A LLA AG++RL
Sbjct: 119 LAAGARVGTSSLRRGAQVLMRRPDLRVVPLRGNANTRMRKLEAGECDATLLALAGLQRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + + +L++E+ P+ QGA+ IE ++ ++L+ I E T +V+ ERA LAEL
Sbjct: 179 LESMARSVLSVEEMLPAVAQGALGIECRADDAVIRDLLAPIACERTTVAVSAERALLAEL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
DGSC++ IA A G +L G++ DG SR G +A IGR+
Sbjct: 239 DGSCRTPIAALAQIDGDSLRIDGLLFLPDGSRHWAASRQGLVAEAERIGRE 289
>gi|189346422|ref|YP_001942951.1| porphobilinogen deaminase [Chlorobium limicola DSM 245]
gi|238058917|sp|B3EIN1|HEM3_CHLL2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189340569|gb|ACD89972.1| porphobilinogen deaminase [Chlorobium limicola DSM 245]
Length = 313
Score = 245 bits (624), Expect = 9e-63, Method: Composition-based stats.
Identities = 120/308 (38%), Positives = 170/308 (55%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG
Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSR--HFPELDITLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS L DL
Sbjct: 59 GLFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGAKLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
L++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL
Sbjct: 119 PLNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLNF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L
Sbjct: 179 SDRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCKAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIR 297
G C+ I +A K TL V + DG + E++R+G + A G A+ +
Sbjct: 239 GGCQIPIGAYASFKNGTLKLLAFVGSVDGTVGINNEITRSGLTSPDQAEEAGIALAEELL 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 KQGADKIL 306
>gi|194017264|ref|ZP_03055876.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061]
gi|194011132|gb|EDW20702.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061]
Length = 311
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 177/306 (57%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKG
Sbjct: 1 MRTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L
Sbjct: 59 LFVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLRLHELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+
Sbjct: 119 KGAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWS 178
Query: 183 KVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
K + E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++D
Sbjct: 179 KEVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMD 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + G+V ++DG + +G+ D IG A+ +
Sbjct: 239 GSCQVPIAGYATINERDEIELTGLVASADGHTIIRETVSGS--DPEAIGTACAKQMADKG 296
Query: 301 NKNVFN 306
K++ +
Sbjct: 297 AKDLID 302
>gi|313199811|ref|YP_004038469.1| porphobilinogen deaminase [Methylovorus sp. MP688]
gi|312439127|gb|ADQ83233.1| porphobilinogen deaminase [Methylovorus sp. MP688]
Length = 320
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF
Sbjct: 12 KLVIASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L
Sbjct: 70 VKELEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 130 SIVGTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC
Sbjct: 190 IAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A G + +G V + DGK GN +G+ AQ + +
Sbjct: 250 TVPLGAYATKLGENITIHGFVASVDGKQMLRAEATGNAAKPELLGQQLAQSLIARGADKI 309
Query: 305 F 305
Sbjct: 310 L 310
>gi|84516581|ref|ZP_01003940.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53]
gi|84509617|gb|EAQ06075.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53]
Length = 314
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 134/302 (44%), Positives = 179/302 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PF IGTR SPLALA A ETR+ LM +P I+ + GD I +R L +IGGKGLF
Sbjct: 11 PFNIGTRGSPLALAQAHETRARLMAAFDLPQDAFAIVVIKVMGDAIQDRALKDIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S TA+ L DL
Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPVEQPSGLLLDTYLPREDVRDAFVSLTARGLDDLEHG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR++ LL R D++V++FRG ++TRL KL N A A LA AG+ RL V
Sbjct: 131 ATVGTSSLRRRSQLLVRRPDLNVVEFRGNVQTRLMKLGNGVAEATFLAMAGLNRLNMTDV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ED P+ QGAI IE ++ +A +++ I+H T + ER+FLA LDGSC
Sbjct: 191 PRTAIAPEDMLPAIAQGAIGIERRADDSRAAAMLEAIHHGPTGQRLAAERSFLAHLDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
++ I G A G TL G +L +DG G D ++GR+ A + +
Sbjct: 251 QTPIGGLADLDGGTLRLRGEILRTDGSQVLADDMIGAIADGADMGREMAVKLLEKAGPGF 310
Query: 305 FN 306
F+
Sbjct: 311 FD 312
>gi|224081346|ref|XP_002306378.1| predicted protein [Populus trichocarpa]
gi|222855827|gb|EEE93374.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 138/307 (44%), Positives = 187/307 (60%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHAELAEDGAIQIVIIKTTGDKILSQPLADIGGKGL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEMTILPCNLPREDVRDAFISMSATSLADLPA 175
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GT+SLRRK+ +L +SV +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 176 GSIVGTASLRRKSQILHRFPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL I+D P+ QGAI I ++ K + +NHE+T +V CERAFL LDG
Sbjct: 236 ENVTSILPIDDMLPAVAQGAIGIACRDSDDKMANYLASLNHEETRLAVACERAFLETLDG 295
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG + SR G D I +G+DA + +
Sbjct: 296 SCRTPIAGYARRDENGDCIFKGLVASPDGTRVLKTSRKGPYAFDDMIAMGKDAGKELLSQ 355
Query: 300 SNKNVFN 306
+ F+
Sbjct: 356 AGPGFFD 362
>gi|255640018|gb|ACU20300.1| unknown [Glycine max]
Length = 356
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 142/306 (46%), Positives = 186/306 (60%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL
Sbjct: 49 IRIGTRGSPLALAQAYETRDKLMASHPDLAEEGAIEIVIIKTTGDKILTQPLADIGGKGL 108
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ L++ EID AVHS KD+PT L + LPRED+RD FIS TA SL DL
Sbjct: 109 FTKEIDEALLNSEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLADLPP 168
Query: 124 HSVIGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ + R+ S +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 169 ASVIGTASLRRKSQILHRYPSLNVQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMT 228
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I ++ K E + +NHE+T +V CERAFL LDG
Sbjct: 229 ENVTSILSIDDMLPAVAQGAIGIACRSDDDKMAEYIDSLNHEETRLAVVCERAFLQTLDG 288
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 289 SCRTPIAGYACRNEDGNCLFRGLVASPDGTRVLETSRVGPYAVEDMIEMGKDAGKELLSR 348
Query: 300 SNKNVF 305
+ N F
Sbjct: 349 AGPNFF 354
>gi|220921724|ref|YP_002497025.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060]
gi|219946330|gb|ACL56722.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060]
Length = 318
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 175/304 (57%), Gaps = 2/304 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58
M +P RIGTR SP+ALA R + H P + ++ ++T D++ +R L+ I
Sbjct: 8 MVHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADKVLDRPLSAI 67
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I++ L R+D RD F+S A+SL
Sbjct: 68 GGKGLFTKELEQALFAGEIDLAVHSMKDVETWLPDGLVIASILERDDPRDAFLSLKARSL 127
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L S +GTSSLRR A +L R D+ ++ RG TR+ +L A LLA AG++R
Sbjct: 128 AELPAGSRVGTSSLRRGAQVLMRRPDLQIVPLRGNANTRIRRLEEGACDATLLAIAGLER 187
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + +E++ + P+ QGA+ IE + + +L++ + T ++ ER LA
Sbjct: 188 LGLAHLAQEVMGTDTMLPAVAQGALGIECRAADQELIDLLQAVACPRTTTALAAERGLLA 247
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
ELDGSC++ IA A +G L G++ DG +R+G +A IG++A ++
Sbjct: 248 ELDGSCRTPIAALAEIEGDRLTLNGLLFLPDGSAHWATTRSGPAAEAAAIGKEAGADLKA 307
Query: 299 ISNK 302
+ +
Sbjct: 308 QAGE 311
>gi|78189475|ref|YP_379813.1| porphobilinogen deaminase [Chlorobium chlorochromatii CaD3]
gi|123757008|sp|Q3AQF5|HEM3_CHLCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78171674|gb|ABB28770.1| Porphobilinogen deaminase [Chlorobium chlorochromatii CaD3]
Length = 313
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 116/308 (37%), Positives = 165/308 (53%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L + P I + + T GD + + L++IG
Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSKHY--PDMEITLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK L++ EID AVHS KD+PT +GL I+++ RED RDV IS LKDL
Sbjct: 59 GLFTKDIEKHLLAREIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGVKLKDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ + TSSLRR + LL R D+ + D RG + TR K ++ + A++LAYAG+ RL
Sbjct: 119 PPNARMATSSLRRMSQLLSVRPDLDIRDIRGNLNTRFQKFDDGEFDAMMLAYAGVYRLNF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL + P+ GQGA+ IET V++ + +E+V+++NH T ERA L L
Sbjct: 179 SDRISEILPHDMMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297
G C+ I +A TL V + DGK + A G A+ +
Sbjct: 239 GGCQIPIGAYATFSNGTLKLLAFVGSVDGKTALRNEITKTGLTSPEQAEEAGIALAEELL 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 KQGADAIL 306
>gi|209965647|ref|YP_002298562.1| porphobilinogen deaminase [Rhodospirillum centenum SW]
gi|209959113|gb|ACI99749.1| porphobilinogen deaminase [Rhodospirillum centenum SW]
Length = 323
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 132/307 (42%), Positives = 179/307 (58%), Gaps = 3/307 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIG 59
K+P RIGTR SPLALA A ETR L + H P I I+ + T GDRI +RTL E G
Sbjct: 1 MKQPLRIGTRGSPLALAQAHETRRRLAEAHPHLAEPDAIEIVVIKTTGDRILDRTLMEAG 60
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+EIE+ L + ID AVHS KD+PT GLQ++A LPRED RD + L
Sbjct: 61 GKGLFTKEIEEALQAETIDLAVHSMKDVPTWRQTGLQLTAMLPREDPRDAWFCRHGCGLD 120
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +V+GT+SLRR+A +L R D+ V+ FRG ++TR+ KL + A LLA AG++RL
Sbjct: 121 ELPAGAVVGTASLRRQAQILARRPDLKVVPFRGNVQTRMTKLAEGQVDATLLALAGLRRL 180
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + + P+ QGAI IET + LV +NH +T V ER LA
Sbjct: 181 GLVEHMTAAIETDVMLPAVAQGAIGIETRAADDVTNALVAALNHAETMTRVTAERGVLAT 240
Query: 240 LDGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDGSC++ IA A G +L +V+ +G+ F+ R G+ DA +G DA Q ++
Sbjct: 241 LDGSCRTPIAALAELPGDGSLTLSALVIRPNGQEFYRTERRGDPDDAEAMGIDAGQELKA 300
Query: 299 ISNKNVF 305
+ F
Sbjct: 301 KLPPDFF 307
>gi|310643595|ref|YP_003948353.1| phosphate abc transporter, atpase subunit [Paenibacillus polymyxa
SC2]
gi|309248545|gb|ADO58112.1| Phosphate ABC transporter, ATPase subunit [Paenibacillus polymyxa
SC2]
Length = 308
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60
+ +G+R S LAL L + + VI + TKGDRI + TL+++GG
Sbjct: 1 MRTIVVGSRQSALALTQTGHVIEDLNALCAEHGLDLQFVIKKILTKGDRILDVTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+D
Sbjct: 61 KGLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLED 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+
Sbjct: 121 LPSGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + E P+ GQGA+ IE ++ + L+++ NH+DT +V ER FL L
Sbjct: 181 WKDRITSYIPEEACLPAVGQGALGIECRASDEELLALLRLYNHQDTSATVEAERTFLGVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A G + G+V + DG++ + + G D +G A +
Sbjct: 241 NGGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQG--NDPQKLGEAVAASLIAKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEQIL 303
>gi|255070965|ref|XP_002507564.1| hydroxymethylbilane synthase [Micromonas sp. RCC299]
gi|226522839|gb|ACO68822.1| hydroxymethylbilane synthase [Micromonas sp. RCC299]
Length = 353
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 122/304 (40%), Positives = 177/304 (58%), Gaps = 4/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
+IGTR SPLALA A+ TR L ++ + I + T GD++ ++ L +IGGKGL
Sbjct: 40 IKIGTRGSPLALAQAYMTRDLLKASFPELGNDGALEICIIKTTGDKVLDQPLADIGGKGL 99
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L
Sbjct: 100 FTRELDVALLDGRIDIAVHSMKDVPTYLPEGTILPCMLPREDVRDAFISVKYDDLSELPE 159
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ +
Sbjct: 160 GSLVGTASLRRQSQLLARFPGLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMTQ 219
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+IL+++ P+ QGAI I + K ++ +NHE+T +V CER+FLA LDGS
Sbjct: 220 HATKILDVDVMLPAVAQGAIGIACRTGDSKQITYLESLNHEETRIAVECERSFLAALDGS 279
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301
C++ IAGFA G L F G+V A DG E SR + DAI G++A ++ +
Sbjct: 280 CRTPIAGFARKDGDNLRFNGLVAALDGSEILETSRVTKWSYADAIAAGKEAGAELKKKAP 339
Query: 302 KNVF 305
F
Sbjct: 340 AEFF 343
>gi|298707417|emb|CBJ30046.1| hydroxymethylbilane synthase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 373
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 127/299 (42%), Positives = 188/299 (62%), Gaps = 2/299 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
IGTR SPLALA A+ETR L + + I + T GD I ++ LTEIGGKGL
Sbjct: 59 LTIGTRGSPLALAQAYETRKRLGEQFDELKEEGAVAIQVIKTSGDMILDKPLTEIGGKGL 118
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E++ +L++ ++D VHS KD+PT ++ G + LPRED D FIS+ A ++ L
Sbjct: 119 FTKELDVQLLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPD 178
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SVIG++SLRR+A LLR V++FRG ++TRL KL+ A LLA+AG+KRL+ +
Sbjct: 179 GSVIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQ 238
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V +L+ + P+ QGAI I+ N+P ++ + + H++T +V+CERAFLA LDG+
Sbjct: 239 VATSVLDQDAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGN 298
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
CK+ IAG A +G L F G++ + DGK F++ +R G DA+ +G DA ++ +
Sbjct: 299 CKTPIAGQARMEGEKLVFRGLIASPDGKQFYDTTREGKPEDAVAMGHDAGMELKKRAGP 357
>gi|34557903|ref|NP_907718.1| porphobilinogen deaminase [Wolinella succinogenes DSM 1740]
gi|55976472|sp|Q7M8L2|HEM3_WOLSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|34483621|emb|CAE10618.1| PORPHOBILINOGEN DEAMINASE [Wolinella succinogenes]
Length = 311
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 163/305 (53%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
IGTR S LAL A ++ L H+ ++ + + TKGD+I + L ++GGKG
Sbjct: 1 MNKIIIGTRGSVLALWQAEYVKAELERAHE--GLSVELKIVKTKGDKILDVPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ GEID AVHS KD+P +L++GL +SA RED+RD F+S SL+ L
Sbjct: 59 LFTKELEEMMLQGEIDLAVHSLKDVPVELIEGLTLSAITEREDVRDCFLSDKYASLETLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L + +GT+SLRR + RSD+ RG ++TR+ +L AI+LA AG+ RL
Sbjct: 119 LGAKVGTTSLRRSMQIKSMRSDLDTESLRGNVQTRIKRLKEGDFDAIILATAGVNRLDLW 178
Query: 183 KVIKE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K + ++ E P+ GQ A+ IE +A L +++ + ER F+ L
Sbjct: 179 KEVNYVIPIDTEMMIPAMGQAALGIECK-EGSEAFRLTQILEDKKARIETTAEREFVRVL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I AY +G TL+ V DG + + +A+ +GR+ A +
Sbjct: 238 EGGCQVPIGANAYLEGETLHLKVAVGLPDGSEILMDRLSAPKGEAVRLGRELAARLIAKG 297
Query: 301 NKNVF 305
+ +
Sbjct: 298 ARELL 302
>gi|46199940|ref|YP_005607.1| porphobilinogen deaminase [Thermus thermophilus HB27]
gi|55980314|ref|YP_143611.1| porphobilinogen deaminase [Thermus thermophilus HB8]
gi|55976454|sp|Q72H57|HEM3_THET2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81600541|sp|Q5SLE8|HEM3_THET8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46197567|gb|AAS81980.1| porphobilinogen deaminase [Thermus thermophilus HB27]
gi|55771727|dbj|BAD70168.1| porphobilinogen deaminase [Thermus thermophilus HB8]
Length = 301
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 163/304 (53%), Gaps = 8/304 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +GTR S LALA L + P I + T+GD+ + I
Sbjct: 1 MRVVVVGTRGSALALAQTRFVVERLKE--TWPETEFKIRTIKTRGDQGASPREEAI---- 54
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F +EI++ L+S EID AVHS KD+PT+ +GL+I++ R+D RDVF+ A+ LKDL
Sbjct: 55 -FVKEIQEALLSREIDIAVHSLKDLPTESPRGLKIASVPRRQDPRDVFLGKAAKRLKDLP 113
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL
Sbjct: 114 PGAVVGTSSVRRKAQILALRPDLVVRDLRGNVDTRLAALGNGEYDGIVLAAAGLIRLDLR 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L+ + P+PGQGA+ +E + A+EL ++H ++ V ERAFL L
Sbjct: 174 NRIDEFLDPGEVLPAPGQGALALEVREGDDLAEELCYALHHPPSYHRVRAERAFLRGLGA 233
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + A+ + TL G++L DGK F G+ +A +G D A+ +
Sbjct: 234 GCLAPVGALAHVEEDGTLRLEGVLLTPDGKSFIRAEIEGDVSEAEELGLDLARDVLEQGG 293
Query: 302 KNVF 305
+ +
Sbjct: 294 REIL 297
>gi|218885688|ref|YP_002435009.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226740632|sp|B8DKW2|HEM3_DESVM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218756642|gb|ACL07541.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 317
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 114/308 (37%), Positives = 159/308 (51%), Gaps = 7/308 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A +S + H P ++ ++ L T+GD I + L ++GGKG
Sbjct: 1 MKKLVIATRGSKLALWQAEHVKSCIEGQH--PGVSVELLVLKTRGDIILDVPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D F+S SL L
Sbjct: 59 LFVKEIEEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHDSLAALP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR++ LL R D++V+ RG ++TRL KL+ + AI++A AG+KRL
Sbjct: 119 HGATVGTSSLRRQSQLLALRPDLNVVSLRGNVDTRLRKLSEGQFDAIIMATAGMKRLGLS 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E+L F P+ GQGA+ IE + EL+ + H T V ER FLA L G
Sbjct: 179 APRSEVLGPPAFLPAVGQGALGIEFRADRADLHELLAFMEHTPTRIRVEAERGFLAGLQG 238
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297
C+ IAG A G T G+V G + NG + A IG D A +
Sbjct: 239 GCQVPIAGHAVMTGDGTFALEGLVADLTGARVIRRTMNGVSAPDGAQARQIGLDLAAQLV 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 ADGAGEIL 306
>gi|254452699|ref|ZP_05066136.1| porphobilinogen deaminase [Octadecabacter antarcticus 238]
gi|198267105|gb|EDY91375.1| porphobilinogen deaminase [Octadecabacter antarcticus 238]
Length = 321
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 119/306 (38%), Positives = 174/306 (56%), Gaps = 4/306 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60
P +IGTR SPLALA A ETR+ LM +P + + T GD + L IG
Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMIAFDLPESAFEVCVIKTSGDDRSLIDADIPLKVIGN 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+EIE+ +++G ID AVHS KDMP GL ++ +LPRED RD F+S + D
Sbjct: 71 KGLFTKEIEEAMLAGRIDIAVHSTKDMPVAQPDGLVLNVFLPREDARDAFVSVKYAGIAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ R+
Sbjct: 131 LPEGAIVGTSSLRRRAQLLVKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++++D P+ QG I IE V++ +A++++ I++ + ERAFLA L
Sbjct: 191 MHDAAIGAIDLDDMLPAIAQGTISIERRVDDLRARDMLAAIHNVQAGQQMAAERAFLAAL 250
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A ++ G +L DG R G + +G + AQ + +
Sbjct: 251 DGSCETPIAGLAMIDCDQMWLRGEILKPDGSQVFTGERRGLVSEGAAMGMELAQELLGQA 310
Query: 301 NKNVFN 306
+ F
Sbjct: 311 GPDFFE 316
>gi|302391331|ref|YP_003827151.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501]
gi|302203408|gb|ADL12086.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501]
Length = 314
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 162/307 (52%), Gaps = 4/307 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ IGTR S LA+ A L + + + + TKGD+I + L+++GG
Sbjct: 1 MKGNKVIIGTRSSDLAVGQAEIVAEMLGKA--VSEYEFELEKIKTKGDKILDSPLSQVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ EID AVHS KDMP +L +GL + + R D RD +S+ ++L +
Sbjct: 59 KGLFIKELEVSLLEEEIDLAVHSMKDMPAELPEGLAVLGFPERVDSRDALVSNGDRNLDE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKR 178
L + IGT SLRR + LL +R D+ V+ RG I TRL KL AI+LA AG+ R
Sbjct: 119 LPTGARIGTGSLRRTSQLLNYRPDLEVVPIRGNINTRLEKLTAEELNLDAIVLAAAGLIR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + I E L+ E P+ GQGA+ IE ++ + + L+ I+ + T + ER FL
Sbjct: 179 MGWKDKITEYLDDEVMLPAAGQGALAIEAREDDEEIKTLINKIDDQRTRYILQAERGFLE 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDG C+ I A +G + G+V DG+ G+ +A +G + A+ +
Sbjct: 239 RLDGDCQVPIGALAEIEGEEITLEGMVATLDGQKHLRDQITGSVGEAEELGIELAEELIA 298
Query: 299 ISNKNVF 305
+ +
Sbjct: 299 KGAEKIL 305
>gi|302756929|ref|XP_002961888.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii]
gi|300170547|gb|EFJ37148.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii]
Length = 353
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 130/309 (42%), Positives = 187/309 (60%), Gaps = 7/309 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + I+ + T GD+I N+ L +IGGKGL
Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L
Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163
Query: 124 HSVIGTSSLRRKALLLRWRSDISVI-DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL
Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG
Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283
Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRF 298
SC++ IAG+A+ F G+V + DG E +R+G N + + +G+DAA+ +
Sbjct: 284 SCRTPIAGYAHRDKLTDECKFRGLVASPDGTQVLETTRSGQYNLDEMVAMGKDAAKELLS 343
Query: 299 ISNKNVFNF 307
S ++ N+
Sbjct: 344 KSGPSLLNW 352
>gi|194336060|ref|YP_002017854.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1]
gi|238058995|sp|B4SFI2|HEM3_PELPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194308537|gb|ACF43237.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1]
Length = 313
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 122/308 (39%), Positives = 171/308 (55%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG
Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSR--HFPELDITLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK LI+ EID AVHS KD+PT GL I+++ RED RDV IS LKDL
Sbjct: 59 GLFTKDIEKHLITKEIDLAVHSLKDVPTATPDGLIITSFTEREDTRDVIISKNGVKLKDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ + TSSLRR + LL R D+ + D RG + TR K +N + A++LAYAG+ RL
Sbjct: 119 PQNAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDNGEFDAMMLAYAGVFRLNF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL E P+ GQGA+ IET V++ + +E+V+++NH T ERA L L
Sbjct: 179 SDRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNG--NRCDAINIGRDAAQYIR 297
G C+ I +A K TL V + DGKI +++ G + A G + A+ +
Sbjct: 239 GGCQIPIGAYASFKNGTLTLLAYVGSVDGKIGLHNNITKTGLTSPEQAEAAGIELAEELL 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 KQGADAIL 306
>gi|94987453|ref|YP_595386.1| porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00]
gi|123262097|sp|Q1MPL2|HEM3_LAWIP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94731702|emb|CAJ55065.1| Porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00]
Length = 309
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LA A + L ++ + ++ + TKGD I + L ++GGKG
Sbjct: 1 MKKITIATRGSKLAFWQANYIKDQLQKMYSY--LEVDLMVIKTKGDHILDVPLAKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+SGE DCAVHS KD+P +L L ++A RED D+F+S +K L
Sbjct: 59 LFVKEIEEALLSGEADCAVHSMKDVPMELPFELCLAAITEREDPTDMFLSIKYSGVKSLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++++GTSSLRR+A LL R D+ +I RG I+TRL KL + AI++A AGIKRL
Sbjct: 119 ENALVGTSSLRRQAQLLALRPDLQIIPLRGNIDTRLRKLMAEEFDAIIMATAGIKRLGLI 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L P+ GQGA+ IE EL +NH++T+ + ER FLA LDG
Sbjct: 179 APYMSSLPCSVMLPAVGQGALGIEVQKERQDVLELFSFLNHKETYHCIQAERDFLAGLDG 238
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ IAG+A K T+ G+V SDG + + DA +IG ++ +
Sbjct: 239 GCQVPIAGYATICKQETICLEGLVAKSDGSVMIRNRLERSVSDAYDIGMTLSKILLAEGA 298
Query: 302 KNVF 305
++
Sbjct: 299 DDIL 302
>gi|226509736|ref|NP_001150986.1| LOC100284619 [Zea mays]
gi|195643410|gb|ACG41173.1| porphobilinogen deaminase [Zea mays]
Length = 356
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 130/306 (42%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKATHSELAEERAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SVIG++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL +
Sbjct: 168 GSVIGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300
C++ IA +AY F G++ + G E +R+G D + +G+DA ++ +
Sbjct: 288 CRTPIAAYAYRDNDGNCSFRGLLASPGGSKVFETTRSGPYSFDDMVEMGKDAGHELKAKA 347
Query: 301 NKNVFN 306
F+
Sbjct: 348 GPGFFD 353
>gi|163856376|ref|YP_001630674.1| porphobilinogen deaminase [Bordetella petrii DSM 12804]
gi|229836105|sp|A9IKF3|HEM3_BORPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|163260104|emb|CAP42405.1| hemC [Bordetella petrii]
Length = 313
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++G
Sbjct: 1 MSVPQRLVIATRASRLALWQAEHVRDRLRALY--PACAVELLTLTTRGDQILDRTLSKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ +L
Sbjct: 59 GKGLFVKELETALLDGRADLAVHSLKDVPVDLQAPFELCAILERADPRDAFVSNQYTTLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +V+GTSSLRR++ + + +SV RG ++TRL+KL+ AI+LA AG++RL
Sbjct: 119 DLPAGAVVGTSSLRRESQIRQRYPHLSVKPLRGNLDTRLSKLDRGDYAAIVLAAAGLQRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I+ +L ED P+ GQGA+ IE + +E + + T V ERA
Sbjct: 179 GMGERIRSLLEPEDSLPAAGQGALGIEIRNDRNDLREWLAPLACSRTTACVVAERAVSRA 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ +A +A G++L +V + DG G A IG+ AAQ +
Sbjct: 239 LGGSCQVPLAAYAELNGNSLALRALVASPDGTRVIRSQHAGPAEQAQAIGQAAAQELLSN 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GADAIL 304
>gi|145588841|ref|YP_001155438.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047247|gb|ABP33874.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 325
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 102/303 (33%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R L ++ P ++ I+ ++T+GD+I +R L+++GGKGLF
Sbjct: 20 LVIASRESRLAMWQAEHVRDCLKSLY--PQCDVQILGMTTRGDQILDRALSKVGGKGLFV 77
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G AVHS KD+P + +G ++ + RED RD F+S+ SL++L +
Sbjct: 78 KELETALEDGRAHLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEELPKGA 137
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + V RG ++TR+ KL+ + AI+LA AG+KRL E I
Sbjct: 138 VVGTSSLRREAVLRAKFPHLEVHPLRGNLDTRMGKLDRGEYQAIILAAAGLKRLGLESRI 197
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L + + P+ GQGA+ IET +P + + +N T +V+ ER +L GSC+
Sbjct: 198 RAYLPYDPYTPAAGQGALGIETLSKHPSIKHWLAPLNDLPTLLAVSAERMVSRQLGGSCE 257
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302
+A A + + V + DGK G +A +G AQ +
Sbjct: 258 VPLAAHAVWDNNQMNIRSFVASVDGKAICLADGVGQVHTIEEAEALGLAVAQDLLAQGAA 317
Query: 303 NVF 305
++
Sbjct: 318 DLI 320
>gi|126653692|ref|ZP_01725611.1| porphobilinogen deaminase [Bacillus sp. B14905]
gi|126589729|gb|EAZ83864.1| porphobilinogen deaminase [Bacillus sp. B14905]
Length = 310
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 116/300 (38%), Positives = 164/300 (54%), Gaps = 5/300 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L P + + TKGD+I + L+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWFINELKAAGA--PFEFEVKEIVTKGDQILDVQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS DL
Sbjct: 59 LFVKEIEQALYDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFADLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+V+GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL
Sbjct: 119 AGAVVGTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E V+ E L++ED P+ QG++ IE ++ + + + + TW + ERAFLA +D
Sbjct: 179 EDVVTEFLSVEDCLPAVAQGSLGIECRGDDTELLAELAKLTDQLTWQEAHAERAFLAAMD 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A G + G+V A D + ++ + G+ DA IG + A +
Sbjct: 239 GGCQVPIAGYATSNGDEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELATILTKQGA 296
>gi|254283408|ref|ZP_04958376.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B]
gi|219679611|gb|EED35960.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B]
Length = 303
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 109/306 (35%), Positives = 159/306 (51%), Gaps = 9/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I TR SPLAL A L ++H P + ++ ++++GD++ +R L ++GG
Sbjct: 1 MSK--IVIATRESPLALWQANHVADRLSELH--PELEVELLGMTSRGDQLLDRPLYKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L G D AVHS KD+P L GL + RED D +
Sbjct: 57 KGLFVKELETALQDGSADIAVHSMKDVPMALPPGLTLGVICEREDPTDSLV--GVSGFDQ 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + LLR R D+ + RG + TRL KL+ + +AI+LA AG+KRL
Sbjct: 115 LPQGARVGTSSLRRGSQLLRHRPDLEIGFLRGNVNTRLAKLDAGEFNAIILASAGLKRLG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++ + P+ GQGA+ IE + + EL+K ++H T V ERA + L
Sbjct: 175 FEDRIGQLIDPDLSLPAGGQGAVGIEYRDGDDRIAELLKPLHHVQTAACVLAERALVRRL 234
Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C IA FA G L+ G V +++GK G D +G D A +
Sbjct: 235 DGGCDVPIASFALPDGDGGLWLRGRVGSTEGKTLLLAEGRG--RDPEVLGYDVADQLLQA 292
Query: 300 SNKNVF 305
+
Sbjct: 293 GAAELL 298
>gi|157693217|ref|YP_001487679.1| porphobilinogen deaminase [Bacillus pumilus SAFR-032]
gi|167008811|sp|A8FFV2|HEM3_BACP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157681975|gb|ABV63119.1| hydroxymethylbilane synthase [Bacillus pumilus SAFR-032]
Length = 311
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 176/306 (57%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKG
Sbjct: 1 MRTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L
Sbjct: 59 LFVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLHLHELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+
Sbjct: 119 KGAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWS 178
Query: 183 KVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
K + E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++D
Sbjct: 179 KEVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMD 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + G+V ++DG + +G D IG A+ +
Sbjct: 239 GSCQVPIAGYATMNERDEIELTGLVASADGHTIIRETVSGT--DPEAIGTACAKQMADKG 296
Query: 301 NKNVFN 306
K++ +
Sbjct: 297 AKDLID 302
>gi|258511805|ref|YP_003185239.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478531|gb|ACV58850.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 305
Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 113/303 (37%), Positives = 160/303 (52%), Gaps = 4/303 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+ TR S LAL L V ++P+ T+GD I +R L+E+GGKG
Sbjct: 1 MRTLRVATRRSALALTQTNHVVDLLKQVAH--GVEFELVPIRTRGDEIVDRALSEVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +IE L +G+ D AVHS KD+P +L GL I A PRED RD IS T Q L DL
Sbjct: 59 LFVADIEDALATGQADLAVHSLKDVPFELRDGLTIGAVPPREDPRDALISRTGQGLFDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A L R R D+ V RG ++TRL +L + AI+LA +G+ RL
Sbjct: 119 PGARVGTSSLRRQAALRRLRPDLCVETLRGNVDTRLRRLEEGQFDAIVLAASGLHRLGLA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+G
Sbjct: 179 ERITEYLPVDRFVPAVGQGALAIECRAEDDEVMRHLAAIADPDATRAVEAERAFLSRLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC+ I +A G L V G ++ R G+ +A +G A+ + +
Sbjct: 239 SCQVPIGAYAEPVGHELRLIAFVADPSGIHHLQLERTGD--EARALGVAMAEEMLRQGAE 296
Query: 303 NVF 305
+
Sbjct: 297 DWL 299
>gi|325981153|ref|YP_004293555.1| porphobilinogen deaminase [Nitrosomonas sp. AL212]
gi|325530672|gb|ADZ25393.1| porphobilinogen deaminase [Nitrosomonas sp. AL212]
Length = 318
Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A + L +++ P I I+ ++T+GD+I +++L++IGGKGL
Sbjct: 9 KKIVIASRESLLAMWQAKFIQKCLSELY--PQTEISILGMTTRGDQILDQSLSKIGGKGL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L G D AVHS KDMP + +G +++A RED RD F+S+ SL L
Sbjct: 67 FIKELEQALEDGRADIAVHSMKDMPMNVPEGFKLAAITEREDPRDAFVSNHHASLDVLPA 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSSLRR++ L + V RG ++TRL KL+ ++ AI+LA AG+KRL+
Sbjct: 127 GSIVGTSSLRRESQLRAHFPLLQVQPLRGNVQTRLRKLDEDQYAAIILAAAGLKRLELSN 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I +LN E P+ GQGA+ IE + +L++ ++H+ T V ER+ L GS
Sbjct: 187 RITALLNPEQSLPAVGQGALGIECRADRMDLIQLMQPLHHQATAYCVEAERSMSRVLGGS 246
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + FA L G V DGK + G I +G+ AQ +
Sbjct: 247 CQVPLGAFAEIDNDKLRLRGFVAQPDGKRIVSGALEGKPETGIAMGQQLAQKLIKKGADE 306
Query: 304 VF 305
+
Sbjct: 307 IL 308
>gi|193212401|ref|YP_001998354.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327]
gi|209572771|sp|P28464|HEM3_CHLP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|193085878|gb|ACF11154.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327]
Length = 312
Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 117/307 (38%), Positives = 171/307 (55%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L + P NI + + T GD + + L++IG
Sbjct: 1 MKKEIIIGTRSSPLALWQAEFTKAELSK--RFPDMNITLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK L++GEID AVHS KD+PT +GL I+++ RED RDV IS + + L DL
Sbjct: 59 GLFTKDIEKHLLAGEIDLAVHSLKDVPTGTPEGLVITSFTEREDTRDVIISKSGKGLMDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ + TSSLRR + LL R D+ ++D RG + TR K + A++LAYAG+ RL+
Sbjct: 119 PQNAKMATSSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL E P+ GQGA+ IET ++ + +E+V+V+N ++T ERA L L
Sbjct: 179 SDRITEILPHETMLPAVGQGALGIETRTDDAETREIVRVLNDDNTEMCCRAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRF 298
G C+ I F TL V + DGK +A +G + A+ +
Sbjct: 239 GGCQIPIGSFGSYIDGTLKLLAFVGSVDGKTGLRNEVTKAVKTPEEAEAVGIELAEILLS 298
Query: 299 ISNKNVF 305
+ + +
Sbjct: 299 MGAEKIL 305
>gi|114770079|ref|ZP_01447617.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255]
gi|114548916|gb|EAU51799.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255]
Length = 307
Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 120/303 (39%), Positives = 171/303 (56%), Gaps = 1/303 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
P IGTR SPLALA A ET L+ + I + T GD+I +R L+E+GGKG
Sbjct: 6 NSPLVIGTRGSPLALAQAHETMGRLIRSTGLDESCFKITVIKTSGDKIQDRPLSEVGGKG 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+EIE ++ ID AVHS KDMP +GL++S YLPRED+RD FIS +++ +L
Sbjct: 66 LFTKEIEDAMLDYGIDIAVHSMKDMPVICPEGLKLSCYLPREDVRDSFISTKYKNINELP 125
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A LL R D+ +++FRG ++TRL KLN A A LA AG+ RL +
Sbjct: 126 KGATVGTSSLRRRAQLLNKRPDLKIVEFRGNVQTRLRKLNEGVAEATFLACAGLNRLGR- 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + +D P+ QG I IE + + E++ IN + + ER LAELDG
Sbjct: 185 NEISNPIEPDDMLPAIAQGCIGIEQREGDTEIAEILTKINDKSASLRLAAERTLLAELDG 244
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IAG A G + G V+ DG + + + + + A+ +R +
Sbjct: 245 SCQTPIAGLAELDGQKMRLRGEVIRPDGSEVLKDEIICHVNEGVEMASGMAKRLRDQMGE 304
Query: 303 NVF 305
+ F
Sbjct: 305 DFF 307
>gi|302817137|ref|XP_002990245.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii]
gi|300141954|gb|EFJ08660.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii]
Length = 353
Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats.
Identities = 130/309 (42%), Positives = 187/309 (60%), Gaps = 7/309 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + I+ + T GD+I N+ L +IGGKGL
Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L
Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163
Query: 124 HSVIGTSSLRRKALLLRWRSDISVI-DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL
Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG
Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283
Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRF 298
SC++ IAG+A+ F G+V + DG E +R+G N + + +G+DAA+ +
Sbjct: 284 SCRTPIAGYAHRDKLTDECKFRGLVASPDGTQVLETTRSGQYNFDEMVAMGKDAAKELLS 343
Query: 299 ISNKNVFNF 307
S ++ N+
Sbjct: 344 KSGPSLLNW 352
>gi|149928342|ref|ZP_01916583.1| porphobilinogen deaminase [Limnobacter sp. MED105]
gi|149822927|gb|EDM82172.1| porphobilinogen deaminase [Limnobacter sp. MED105]
Length = 310
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 161/303 (53%), Gaps = 3/303 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI +R S LA+ A R L+ + + + I+ ++TKGD+I +R+L +IGGKGLF
Sbjct: 2 KIRIASRESRLAMWQAEHVRDLLLALPGVSG--VEIVGMTTKGDQILDRSLAKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+ G D AVHS KD+P + Q+ ++ RED D F+S+ SL DL
Sbjct: 60 IKELEYALLEGRADLAVHSGKDIPMDVDPEFQLLGFMTREDPHDAFVSNDYASLADLPAG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+G+SSLRR+A +L + V RG ++TRL KL++ + AI+LA AG+KRL
Sbjct: 120 AVVGSSSLRRQAQVLARYPHLKVEPLRGNLDTRLGKLDSGQYQAIVLAAAGLKRLGLHSR 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ D P+ GQGA+ +E + + ELVK + V+ ER+ L GSC
Sbjct: 180 IRNVIESTDMLPAVGQGALGLEIRAGDSQLAELVKPLIDPVCTALVSAERSVSKALGGSC 239
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ IAG+A T G+V + DGK E S + D + + +
Sbjct: 240 QVPIAGYATLNDAQTFTLRGLVASPDGKAVIEKSAQASLQDWETAANRVIEGLLQEGAQA 299
Query: 304 VFN 306
+
Sbjct: 300 LIE 302
>gi|330804637|ref|XP_003290299.1| porphobilinogen deaminase [Dictyostelium purpureum]
gi|325079586|gb|EGC33179.1| porphobilinogen deaminase [Dictyostelium purpureum]
Length = 319
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 99/314 (31%), Positives = 166/314 (52%), Gaps = 11/314 (3%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++ IG+R S LA+ R L +++ P + I + T GD++ + +L++IG
Sbjct: 1 MSERNTVYIGSRKSQLAMLQTEWVRDRLQELN--PNIKVEIKTMDTTGDKVLDVSLSKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KGLFT+E+E +++G +D AVHS KD+PT+L GL++ A R D FI++ + K
Sbjct: 59 DKGLFTKELEDMMLNGSVDLAVHSLKDIPTRLPDGLKLGAITKRYSTSDAFIANVKKHGK 118
Query: 120 DL-----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172
D ++IG+SSLRR A L + + D RG + TR NKL+ +++ ++LA
Sbjct: 119 DCKLSDLPNGALIGSSSLRRVAQLKKSYPHLQFKDIRGNLNTRFNKLDAVDSEYDGMILA 178
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG++R+ I +++ E + GQGA+ IE N+P +++++ +NH ++
Sbjct: 179 VAGLERMNLTDRISQVIPDEISLYAVGQGALGIECKENDPFIEKILEPLNHSESMMRCKA 238
Query: 233 ERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
ER+ L EL+G C I + + L GIVL DG + E G +G+D
Sbjct: 239 ERSMLRELEGGCHVPIGVVTKINQNNILEIKGIVLNLDGSKYIESYIEGPVEQYEQLGKD 298
Query: 292 AAQYIRFISNKNVF 305
A + +K +
Sbjct: 299 IAADLIKKGSKEIL 312
>gi|323136449|ref|ZP_08071531.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242]
gi|322398523|gb|EFY01043.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242]
Length = 308
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 133/296 (44%), Positives = 178/296 (60%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR SPLALA R++L H + + I + T GD+I +R L+E GG
Sbjct: 1 MTVRSLRIGTRGSPLALAQTHMIRAALAQAHGVAEDHFAIEIIKTTGDQIQDRPLSESGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E++ LI+G+ID AVHS+KD+PT L + I+ YLPRED RD +I +L
Sbjct: 61 KGLFTKELDSALIAGDIDLAVHSSKDLPTHLPAEIVIAGYLPREDARDAWIGRNGVTLDQ 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR A + R R D+ RG + TRLNK+ + A LLA AG+KRL
Sbjct: 121 LPAGAVVGTASLRRAAQVKRLRPDVQTTLLRGNVHTRLNKVERGEIDATLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+L ++DFPP+ GQGAI I + N+P+ + + + E T ++ ERAFLA L
Sbjct: 181 LADRATALLPLDDFPPAVGQGAIGITSRANDPETRAALAPLLDEATALALLAERAFLAAL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
DGSC++ IAG A K L FYG VL +DG V R+G DA IG DA I
Sbjct: 241 DGSCRTPIAGHATVKDGDLTFYGEVLKADGSEVWIVRRHGRAIDAAMIGADAGNEI 296
>gi|149181766|ref|ZP_01860257.1| porphobilinogen deaminase [Bacillus sp. SG-1]
gi|148850507|gb|EDL64666.1| porphobilinogen deaminase [Bacillus sp. SG-1]
Length = 310
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 166/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL S L ++ + + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWVISQLKEL--DSSFEFEVKEIVTKGDQILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ EID AVHS KDMP +L +GL I RED RD FIS L DL
Sbjct: 59 LFVKEIEQAMLDKEIDMAVHSMKDMPAELPEGLCIGCIPEREDHRDAFISKDHVKLADLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
++IGTSSLRR A +L R D+ + RG I+TRL KL AI+LA AG+ R+
Sbjct: 119 AGAIIGTSSLRRGAQILAQRPDLEIKWIRGNIDTRLGKLETEDYDAIILAAAGLSRMGWT 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
V+ E L+ E P+ GQGA+ IE ++ + L+ + +V ER FL +++
Sbjct: 179 SNVVTEFLDPEVCVPAVGQGALSIECREDDEELLGLLGKFASDQVTKTVTAERTFLHKME 238
Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DGK ++ + G+ D + +G +AA +
Sbjct: 239 GGCQVPIAGYAELLQEEDVKLTVLVASPDGKDIYKETVTGS--DPVQVGEEAAALLTERG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKALID 302
>gi|298369901|ref|ZP_06981217.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281361|gb|EFI22850.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 311
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGTIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIASHRTDLLDVLKPLNHDITRACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQADAQAPAAYADALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIE 304
>gi|270158066|ref|ZP_06186723.1| porphobilinogen deaminase [Legionella longbeachae D-4968]
gi|289163669|ref|YP_003453807.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150]
gi|269990091|gb|EEZ96345.1| porphobilinogen deaminase [Legionella longbeachae D-4968]
gi|288856842|emb|CBJ10653.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150]
Length = 310
Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR SPLAL A R L ++K P NI ++P++T GD+ L +GG
Sbjct: 1 MNSRIIRIATRQSPLALWQANYVRQLL--LNKWPKLNIELLPMTTSGDKFLKDKLLAVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS+KDMP + GL ++A R++ D +SH SL+
Sbjct: 59 KGLFVKELEEALLDKRADFAVHSSKDMPAEFPHGLCLAAICKRDNPFDALVSHHYTSLQT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++IGT+SLRR++ LL +RSD+ V RG I TRL KL + AI+LA +G++R+
Sbjct: 119 LPERAIIGTASLRRQSQLLAYRSDLCVKPLRGNINTRLEKLRAGEYQAIILAASGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
VI E L E P+ GQGA+ IE ++ + LV +N + V+ ER A+L
Sbjct: 179 FTHVITEQLPTEIMLPACGQGALAIECRTDDQETLALVAELNDPISSLCVHTERQVNAQL 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C +A F + + L +L DG ++ G+ A N+ +Q +
Sbjct: 239 GGNCHIPLAVFCTPIEKNQLLLQAKILTIDGSQTIADTQMGSFAQATNMADRCSQSLIAQ 298
Query: 300 SNKNVF 305
N+
Sbjct: 299 GAANLL 304
>gi|268317443|ref|YP_003291162.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252]
gi|262334977|gb|ACY48774.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252]
Length = 312
Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats.
Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 7/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +GTR S LAL A RS L ++ + + T GD I + L +IG
Sbjct: 1 MPEPTLILGTRGSALALRQATLIRSFLEAR----GVSVQVEIIRTTGDHIQDVPLAKIGA 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SL 118
KGLFT+E+++ L+ G ID AVHS KD+PT++ +GL ++A R DVF++H L
Sbjct: 57 KGLFTKELDQALLEGRIDLAVHSLKDLPTEMPEGLVVAAVPERAPPWDVFVAHPDFAGRL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+DL +V+ TSSLRR+A L WRSD+ V+ RG ++TRL KL H ++LA AG++R
Sbjct: 117 EDLPTGAVVATSSLRRQAQLRAWRSDLQVVPVRGNVDTRLRKLEAEGWHGLILAEAGLQR 176
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + +++ + E P+ GQGA+ + N + + L++ ++H T +V ERA L
Sbjct: 177 LGLLERVRQRIAPEILLPAVGQGALGVVCAEANRRVRALLQALHHAPTAAAVRAERALLH 236
Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L G C+ +A A + TL G V++ DG+ E + G + +G A+ +
Sbjct: 237 ALQGGCQVPVAALAAVEADGTLVLRGRVVSLDGRQLVEGVQRGAMAEPEAVGEALAETLL 296
Query: 298 FISNKNVFN 306
+ +
Sbjct: 297 QQGARAILE 305
>gi|251798413|ref|YP_003013144.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2]
gi|247546039|gb|ACT03058.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2]
Length = 323
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 12/312 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGK 61
+ +GTR S LAL + L + + + I + TKGDRI + TL+++GGK
Sbjct: 9 RTIVVGTRQSALALTQTGQVIDELKRISEKHGFDYHFEIRKIVTKGDRILDVTLSKVGGK 68
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+ GEID AVHS KDMP +L +GL A R D RD I SL DL
Sbjct: 69 GLFVKEIEQALLDGEIDMAVHSMKDMPYELPEGLMNGATPRRVDPRDCLIMKQGSSLDDL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR + L R D+ + RG I++R+ KL A++LA AG+ R+
Sbjct: 129 PAGARVGTSSLRRSSQLKNIRPDLKLDSIRGNIDSRIRKLETEGFDAVVLAAAGLSRMGW 188
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + ++ P+ GQGA+ IE + +EL+ ++N +T SV ER+FL L+
Sbjct: 189 QDRISAFIPVDLSIPAVGQGALGIECRTADAGVRELLNLLNDTETSLSVRAERSFLGALN 248
Query: 242 GSCKSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
G C+ I FA + L G+V + DG++ + R G D +GRD A
Sbjct: 249 GGCQVPIGAFAVVHKKSEDSFDNAELELTGMVGSPDGEVMLKEIRKGT--DPEQLGRDVA 306
Query: 294 QYIRFISNKNVF 305
+ +
Sbjct: 307 AALSARGADRIL 318
>gi|260574199|ref|ZP_05842204.1| porphobilinogen deaminase [Rhodobacter sp. SW2]
gi|259023665|gb|EEW26956.1| porphobilinogen deaminase [Rhodobacter sp. SW2]
Length = 314
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 130/303 (42%), Positives = 180/303 (59%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +IGTR SPLAL A ETR SLM +P I+ + GD++ +R L EIGGKGLF
Sbjct: 11 PLKIGTRGSPLALWQAHETRRSLMAAFSLPEAAFEIVVIKVTGDQVQDRALKEIGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T EIE L+ G ID AVHS KDMPT +GL + YLPRED+RD F+S T L DL
Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPTLQPEGLLLDCYLPREDVRDAFVSPTVARLADLPHG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL V
Sbjct: 131 ATVGSSSLRRRAQLAARRPDLNLVEFRGNVQTRMKKLEDGVAVATFLAMAGLNRLGMAHV 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + +E+ P+ QGAI IE +P+A+ L+ I+H T + CERA+L ELDGSC
Sbjct: 191 ARSAIEVEEMLPAVAQGAIGIERRTADPRAEALLAGIHHGPTGIRLACERAYLQELDGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG + +G ++ G +L DG DA GRD A+ + + +
Sbjct: 251 ATPIAGMSVLEGDRIWLRGEILRPDGSEVIAGEIRAAASDAAEAGRDLARQLLGRAPEGF 310
Query: 305 FNF 307
F++
Sbjct: 311 FSW 313
>gi|332978074|gb|EGK14812.1| hydroxymethylbilane synthase [Desmospora sp. 8437]
Length = 367
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 159/304 (52%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +GTR S LA+ + D + + + T+GD+I N TL+++GGKG
Sbjct: 59 MRTIVVGTRRSQLAVTQTQWVMEQVRDRLPQ-GWQMEMEKMVTRGDQILNVTLSKVGGKG 117
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L+ G ID AVHS KDMP ++ +GL A RED RD +S + L DL
Sbjct: 118 LFVKEIEQALLDGRIDFAVHSMKDMPGEMPEGLIFGAVTRREDPRDCLLSRKGEGLDDLP 177
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ +GTSSLRR+A LL +R D+ V RG + TR KL + + AI+LA AGI R+
Sbjct: 178 ENACVGTSSLRRQAQLLAYRPDLRVEPVRGNLNTRYQKLMDGQFDAIILAQAGIARMDWT 237
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ +++ E P+ GQGA+ ++ ++ + EL+ +N T +V ER FL +G
Sbjct: 238 DKVTQVVPEEVMLPAVGQGALAVQCRRDDQELLELLAEVNDPVTERAVTAERTFLQAFEG 297
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C IAG A G + G+V G G D + +GR A+ + +
Sbjct: 298 GCHLPIAGRATVDGERIRLRGLVAHPSGTPILREEAEG--ADPVELGRRLARELMEKGAR 355
Query: 303 NVFN 306
++
Sbjct: 356 SLLE 359
>gi|296080867|emb|CBI18797.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 138/307 (44%), Positives = 187/307 (60%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL
Sbjct: 21 VRIGTRGSPLALAQAYETRDKLMAAHSELAEEGAIQIVVIKTTGDKILTQPLADIGGKGL 80
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ L++G+ID AVHS KD+PT L + LPRED+RD FIS TA SL +L
Sbjct: 81 FTKEIDEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLSELPA 140
Query: 124 HSVIGTSSLRRKAL-LLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GT+SLRRK+ L R++S + +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 141 GSIVGTASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 200
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I++ P+ QGAI I N+ K + +NHE T +V CERAFL LDG
Sbjct: 201 ENVTSILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLNHEVTRLAVACERAFLETLDG 260
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 261 SCRTPIAGYASHDEDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSR 320
Query: 300 SNKNVFN 306
+ F+
Sbjct: 321 AGPGFFD 327
>gi|169829410|ref|YP_001699568.1| porphobilinogen deaminase [Lysinibacillus sphaericus C3-41]
gi|238058924|sp|B1HVD6|HEM3_LYSSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|168993898|gb|ACA41438.1| Porphobilinogen deaminase [Lysinibacillus sphaericus C3-41]
Length = 310
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 115/300 (38%), Positives = 165/300 (55%), Gaps = 5/300 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L P + + TKGD+I + L+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWFINELKAAGA--PFEFEVKEIVTKGDQILDVQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS +L
Sbjct: 59 LFVKEIEQALYEKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFSELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+V+GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL
Sbjct: 119 AGAVVGTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E V+ E L++ED P+ QG++ IE ++ + + + + + TW + ERAFLA +D
Sbjct: 179 EDVVTEFLSVEDCLPAVAQGSLGIECREDDTELLDELAKLTDQLTWQEAHAERAFLAAMD 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A G + G+V A D + ++ + G+ DA IG + A +
Sbjct: 239 GGCQVPIAGYATSNGEEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELATILTKQGA 296
>gi|326317960|ref|YP_004235632.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374796|gb|ADX47065.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 318
Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 9/303 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H + ++ ++TKGD+I +RTL+++GGKGLF
Sbjct: 17 PIVIATRESRLALWQAEHVQALLRAR----GHAVELLGMTTKGDQILDRTLSKVGGKGLF 72
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL
Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 133 AVVGTSSLRRQVLLQALRPDLDIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGMEDR 192
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC
Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDG-KIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299
+A TL G +G + V + +A +G A +R
Sbjct: 253 SVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQVSAPVASLPEAEALGSAVAARLRAD 312
Query: 300 SNK 302
+
Sbjct: 313 GAQ 315
>gi|255558669|ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis]
gi|223540457|gb|EEF42025.1| porphobilinogen deaminase, putative [Ricinus communis]
Length = 372
Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats.
Identities = 140/307 (45%), Positives = 187/307 (60%), Gaps = 6/307 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR LM H I I+ + T GD+I + L +IGGKGL
Sbjct: 65 IRIGTRGSPLALAQAHETRDKLMAKHSELAEEGAIQIVIIKTTGDKILTQPLADIGGKGL 124
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+GEID AVHS KD+PT L + + LPRED+RD FIS +A SL +L
Sbjct: 125 FTKEIDEALINGEIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSASSLAELPS 184
Query: 124 HSVIGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SVIGT+SLRRK+ + R+ S + +FRG ++TRL KLN A LLA AG+KRL
Sbjct: 185 GSVIGTASLRRKSQILHRYPSLSVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 244
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +L+I+D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG
Sbjct: 245 ENVTSVLSIDDMLPAVAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDG 304
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 305 SCRTPIAGYASKDENGDCIFKGLVASPDGTRVLETSRKGPYALDDMIMMGKDAGKELLLQ 364
Query: 300 SNKNVFN 306
+ F+
Sbjct: 365 AGPGFFD 371
>gi|304407492|ref|ZP_07389144.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9]
gi|304343443|gb|EFM09285.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9]
Length = 325
Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats.
Identities = 108/314 (34%), Positives = 161/314 (51%), Gaps = 13/314 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGG 60
+ R+GTR S LAL + L ++ + + + TKGDRI + TL+++GG
Sbjct: 9 MRVIRVGTRQSALALTQTGQVIEQLKELSERHGLPYTFETVKIVTKGDRILDVTLSKVGG 68
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L+ GEID AVHS KDMP +L +GL + R D RDV I+
Sbjct: 69 KGLFVKEIEQALLDGEIDLAVHSMKDMPYELPEGLMNGSVPKRVDPRDVLITADGGGFDA 128
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + L R DI ++ RG I++RL KL + AI+LA AG+ R+
Sbjct: 129 LPNGAKVGTSSLRRASQLKNRRPDIEIVSIRGNIDSRLKKLETEQFDAIVLAAAGMTRMG 188
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I L ++ P+ GQGA+ IE + + L+ ++N + +V ER+FL L
Sbjct: 189 WENRISSPLPVDICVPAVGQGALGIECREADSDVRYLLSLLNDPISELAVRAERSFLGAL 248
Query: 241 DGSCKSAIAGFAYC---------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
+G C+ I A +G+ + GIV + DG+I + G D +G
Sbjct: 249 NGGCQIPIGAHATVAIPEGASNLEGALIELVGIVGSPDGEILLKE--IGKGTDPEALGLS 306
Query: 292 AAQYIRFISNKNVF 305
A +R +
Sbjct: 307 VAAALRANGADQIL 320
>gi|261364223|ref|ZP_05977106.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996]
gi|288567837|gb|EFC89397.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996]
Length = 311
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG
Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++
Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+
Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L
Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ +A + + L G+V DG + + A +GR A+ +
Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQAHAQAPAAYAEALGRAVAKKLADDG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 AQELIE 304
>gi|328952141|ref|YP_004369475.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109]
gi|328452465|gb|AEB08294.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109]
Length = 311
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 164/304 (53%), Gaps = 2/304 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S LALA A + + + P + + + T GD+I + L +IGGK
Sbjct: 1 MKNHLRIGTRGSALALAQAAWVQQQIQ--GRYPQITVDLEIIKTTGDKIQDVALAKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+EIE ++SGE+D VHS KD+PT++ GL I RED RD FIS +SL ++
Sbjct: 59 GLFTKEIEMAILSGEVDLGVHSMKDVPTEIPLGLVIGITTVREDPRDAFISRKYRSLAEI 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
L IGT SLRR+A LL R D+ ++ RG ++TRL KL AI+LA AG+ RL +
Sbjct: 119 PLGGRIGTGSLRRRAQLLHLRPDLEIVPLRGNVDTRLRKLTEADLDAIILAAAGLHRLGR 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I IL P+ GQGA+ +E ++ EL++ ++ +T +V ERAFLA L+
Sbjct: 179 AAEITAILPETQMLPAIGQGALGLEYRQDDAVTMELLEFLDDPETRVAVAAERAFLARLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IA K L+ G++ G + + A ++G+ A+ +
Sbjct: 239 GGCQVPIAAMGTLKKGELFLDGLIGDLAGSRIYREQLSRPPAAAADLGQQLAETLLKRGG 298
Query: 302 KNVF 305
+
Sbjct: 299 AQIL 302
>gi|255634492|gb|ACU17610.1| unknown [Glycine max]
Length = 350
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 137/306 (44%), Positives = 189/306 (61%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
+IGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 43 LKIGTRGSPLALAQAYETRDKLMASHPELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ D AVHS KD+PT L + LPRED+RD FIS +A SL DL
Sbjct: 103 FTKEIDEALINGDSDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L ++V +FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 163 GSVVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G
Sbjct: 223 ENVSSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299
SC + IAG+A + F G+V + DG E SR G+ D I +G+DA + +
Sbjct: 283 SCHTPIAGYASRNEDGNCLFRGLVASPDGTRVLETSRIGSYAFEDMIKMGKDAGEELLSR 342
Query: 300 SNKNVF 305
+ F
Sbjct: 343 AGPGFF 348
>gi|21674248|ref|NP_662313.1| porphobilinogen deaminase [Chlorobium tepidum TLS]
gi|25453021|sp|Q8KCJ4|HEM3_CHLTE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21647416|gb|AAM72655.1| porphobilinogen deaminase [Chlorobium tepidum TLS]
Length = 312
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 116/307 (37%), Positives = 170/307 (55%), Gaps = 5/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L P NI + + T GD + + L++IG
Sbjct: 1 MKKELIIGTRSSPLALWQAEFTKAELSR--HFPELNITLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK L++ EID AVHS KD+PT +GL IS++ RED RDV IS + + LKDL
Sbjct: 59 GLFTKDIEKHLLAKEIDLAVHSLKDVPTGTPEGLVISSFTKREDTRDVIISKSGKGLKDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ + TSSLRR + LL R D+ ++D RG + TR K ++ + A++LAYAG+ RL+
Sbjct: 119 PPNARMATSSLRRMSQLLSMRPDLQILDIRGNLNTRFKKFDDGEFDAMMLAYAGVYRLEF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL + P+ GQGA+ IET ++ + E+V+V+N +T ERA L L
Sbjct: 179 SDRISEILPHDVMLPAVGQGALGIETRTDDAETIEIVRVMNDSNTEICCRAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRF 298
G C+ I + TL V + DGK +A +G + A+ +
Sbjct: 239 GGCQIPIGCYGSYISGTLKLLAFVGSVDGKTALRNELTKPVNTPEEAEAVGIELAEVLLS 298
Query: 299 ISNKNVF 305
+ + +
Sbjct: 299 MGAEKIL 305
>gi|152976881|ref|YP_001376398.1| porphobilinogen deaminase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189042874|sp|A7GTE5|HEM3_BACCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152025633|gb|ABS23403.1| porphobilinogen deaminase [Bacillus cytotoxicus NVH 391-98]
Length = 309
Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLQALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPAGLTIGCIPKRVDPRDAFISKNGKSFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG+KR+ +
Sbjct: 119 KGATLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEENYDAIILATAGLKRMGWD 178
Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 NDVITEHLDESLCVPAVGQGALAIECREDDKDLLQLLAHMNDAATERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + + +V ++DG + + + G + +G +AA+ +
Sbjct: 239 GGCQVPIAGYATLQENGKIKLHALVGSTDGSVLLKETVVGT--NPETVGLEAAERLIHQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|299535618|ref|ZP_07048939.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1]
gi|298728818|gb|EFI69372.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1]
Length = 310
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 115/300 (38%), Positives = 158/300 (52%), Gaps = 5/300 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L P + + TKGD+I + L+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L EID AVHS KDMP L GL I PRED RD FIS DL
Sbjct: 59 LFVKEIEQALYDKEIDFAVHSMKDMPAVLPDGLVIGCIPPREDARDAFISKGHVKFADLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+V+GTSSLRR A LL R DI + RG ++TRL KL + AI+LA AG+KRL
Sbjct: 119 AGAVVGTSSLRRSAQLLTVRPDIEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ E L +E P+ QG++ IE ++ + + + TW + ERAFLA +D
Sbjct: 179 DDVVTEFLPVEQCLPAVAQGSLGIECRADDAELLAELGKLTDSFTWQEAHAERAFLAAMD 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG+A G + G+V A D + + + G DA IG + A +
Sbjct: 239 GGCQVPIAGYATSIGEEITLTGLVAAPDASVVFKETVVGT--DAQKIGEELAAILTEQGA 296
>gi|242309899|ref|ZP_04809054.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489]
gi|239523196|gb|EEQ63062.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489]
Length = 314
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LAL A + +L + + + + + TKGD+I + L +IGGKG
Sbjct: 1 MKKIIIGTRGSVLALWQANFVKRALEEQYS--NLEVELKIVKTKGDKILDVPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ GEID AVHS KD+P + ++ L ++A RED+RD F+S +SL++L
Sbjct: 59 LFTKELEELMLKGEIDIAVHSLKDVPVEFVENLGLAAITKREDVRDSFLSFKYKSLEELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRR + R D+ I RG ++TRL +L AI+LA AG+ RL E
Sbjct: 119 SGAKVGTTSLRRVMQIHTLRKDLDCISLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIE 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I I+ ++ P+ GQ A+ IE + + K E++ +N + + ER F+ L+G
Sbjct: 179 NEIPYIIPLDFMIPAMGQAALGIECRM-DSKVVEMLDFLNDKKACFETSAEREFVRTLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFI 299
C+ I A + + L ++ DG S+ + IGR A +
Sbjct: 238 GCQVPIGVNANLENNLLSIKAVLGIPDGTKCLRDSKEVQVQGVEECRQIGRKLALEMIDK 297
Query: 300 SNKNVF 305
+ +
Sbjct: 298 GAREIL 303
>gi|218295973|ref|ZP_03496753.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23]
gi|218243711|gb|EED10239.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23]
Length = 303
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 157/303 (51%), Gaps = 8/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +GTR S LALA L + P + + T+GD + +
Sbjct: 1 MRVIVVGTRGSALALAQTRWVVERLKE--SWPEAEFKVKTIRTRGDGGADPR-----EQA 53
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +E+++ L++ EID AVHS KD+PT+ KGL+I+A R+D RD F+ + L+DL
Sbjct: 54 IFVKELQEALLAREIDIAVHSLKDLPTEEPKGLKIAAIPRRQDPRDAFLGKAFKRLEDLP 113
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSS+RRKA +L R D+ V D RG ++TRL L + AI+LA AG+ RL
Sbjct: 114 PGAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGGGEYDAIILAAAGLIRLDLR 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L
Sbjct: 174 NRIDQFLEPEVMLPAPGQGALALEVRQGDDLAEELSYALHHHASHDRVRAERAFLRGLGA 233
Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + A + TL G + A DGK F G +A +G + A+ I
Sbjct: 234 GCLAPVGALAQVGEDGTLVLEGGIFAPDGKSFIRAEIEGEASEAEELGLELARDILEQGG 293
Query: 302 KNV 304
+ +
Sbjct: 294 REI 296
>gi|85713686|ref|ZP_01044676.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A]
gi|85699590|gb|EAQ37457.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A]
Length = 316
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 138/299 (46%), Positives = 191/299 (63%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+
Sbjct: 12 TIGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL S+
Sbjct: 72 EIEEALLAGAIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPRAASLHDLPAGSI 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT+SLRR+A++LR R D+ V RG +ETRL K++ +A A LLA AG+ RL +
Sbjct: 132 VGTASLRRQAMVLRLRPDLKVNALRGNVETRLRKIDAGEADATLLALAGLNRLGLQDKAT 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
IL E+F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 192 RILETEEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRT 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I G G ++F G++++ DG +E +R G R DA +G DAA +R + + F
Sbjct: 252 PIGGHCRVNGDRIHFRGLIISPDGTESYETTREGARADAAALGADAAHELRERAGEKFF 310
>gi|194334346|ref|YP_002016206.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271]
gi|238058997|sp|B4S922|HEM3_PROA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194312164|gb|ACF46559.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271]
Length = 312
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 114/308 (37%), Positives = 168/308 (54%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ IGTR SPLAL A T++ L P +I + + T GD + + L++IG
Sbjct: 1 MKQQLIIGTRSSPLALWQAEFTKAELSK--NFPELDIQLKLIKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK L++ EID AVHS KD+PT+ +GL +SA+ RED RDV IS +LK L
Sbjct: 59 GLFTKDIEKHLLAKEIDLAVHSLKDVPTETPEGLILSAFTEREDTRDVIISKNGDNLKQL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ I TSSLRR + LL R D + D RG + TR + + + A++LAYAG+ RL
Sbjct: 119 KPNAKIATSSLRRTSQLLGIRPDFEMGDIRGNLNTRFKRFDESDFDAMILAYAGVHRLNF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL + P+ GQGA+ IET +++ + +++VKV+N++++ ERA L L
Sbjct: 179 GDRISEILPHDVLLPAVGQGALGIETRIDDEQTRQIVKVMNNQNSEYCTKAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRDAAQYIR 297
G C+ I +A K TL+ V + DGK A G + A+ +
Sbjct: 239 GGCQIPIGAYATYKNGTLHLSAFVGSVDGKRAIRNEITKENVTAPELAEKTGIELAEELM 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 KQGANEIL 306
>gi|281203457|gb|EFA77657.1| porphobilinogen deaminase [Polysphondylium pallidum PN500]
Length = 324
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 107/316 (33%), Positives = 154/316 (48%), Gaps = 13/316 (4%)
Query: 1 MEKKP----FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56
M IG+R S LA+ SL ++H P I + T GDR+ N L+
Sbjct: 1 MSNNKNRDTIIIGSRKSQLAMVQTESVMKSLQELH--PNLKFEIKTMDTVGDRVLNVALS 58
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
+IG KGLFT+E+E ++SG ID AVHS KD+PTK +GL + A RE+ D FI+H
Sbjct: 59 KIGDKGLFTKELEDLMLSGHIDIAVHSLKDLPTKFPEGLSLGAITKRENCFDAFIAHPKY 118
Query: 117 SLK----DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILL 171
+ +VIG+SSLRR + L R + D RG + TR NKL + ++L
Sbjct: 119 GKDARLSSMPEGAVIGSSSLRRVSQLKRAYPQLQFKDIRGNLNTRFNKLETSGEYDGMIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++RL I E+L E + GQGA+ IE ++ Q L+ +NH +T
Sbjct: 179 AVAGLERLGWTDRITEVLQPEVSLYAVGQGALGIECRSDDEFVQSLLAPLNHYETAQCCA 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ERA L EL+G C I + + L G+VL+ DG +S G +G
Sbjct: 239 AERAMLRELEGGCHVPIGVNTTLEQNNSILSIEGVVLSLDGTKSIRLSHRGEIDQPEIVG 298
Query: 290 RDAAQYIRFISNKNVF 305
+ A ++ +
Sbjct: 299 KQLALMLKEKGATEIL 314
>gi|160872858|ref|ZP_02062990.1| porphobilinogen deaminase [Rickettsiella grylli]
gi|159121657|gb|EDP46995.1| porphobilinogen deaminase [Rickettsiella grylli]
Length = 311
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 124/308 (40%), Positives = 170/308 (55%), Gaps = 5/308 (1%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M KK RI TR SPLA A ++ L + P I ++P T+GDR + +L + G
Sbjct: 1 MSKKKFLRIATRKSPLAYWQATSIKNQLEKI--FPFLKITLLPFVTEGDR-PSHSLNQWG 57
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L+ G+ D AVHS KD+P L KGL + A R D RDV IS + +
Sbjct: 58 GKGLFVKELEAALLHGQADIAVHSLKDLPMTLEKGLVLGAICKRCDPRDVLISRSDRLFT 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L S +GTSSLRR++ LL R D+ + RG I TRLNKL + AI+LA AG+ RL
Sbjct: 118 QLPPGSYVGTSSLRRQSQLLALRPDLKIGVLRGNIGTRLNKLAAGEFDAIILAAAGLIRL 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
KK + I E I+ F P+PGQGA+ IE H N+ ++ + + H T V ERA E
Sbjct: 178 KKTECISEYFEIDHFLPAPGQGALGIECHENDEESLTYISALIHPITHSCVLAERALSRE 237
Query: 240 LDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C+ +A + A + V +SDG +V + G R +A IG AAQ +R
Sbjct: 238 LGGGCQVPLAAYAASLGQDFIRLQAFVGSSDGTTQIKVEKQGPRVEAEKIGFLAAQDLRA 297
Query: 299 ISNKNVFN 306
+ + + N
Sbjct: 298 LGVEEILN 305
>gi|167636181|ref|ZP_02394485.1| porphobilinogen deaminase [Bacillus anthracis str. A0442]
gi|170688695|ref|ZP_02879900.1| porphobilinogen deaminase [Bacillus anthracis str. A0465]
gi|254687046|ref|ZP_05150904.1| porphobilinogen deaminase [Bacillus anthracis str. CNEVA-9066]
gi|254741606|ref|ZP_05199293.1| porphobilinogen deaminase [Bacillus anthracis str. Kruger B]
gi|167528402|gb|EDR91170.1| porphobilinogen deaminase [Bacillus anthracis str. A0442]
gi|170667381|gb|EDT18139.1| porphobilinogen deaminase [Bacillus anthracis str. A0465]
Length = 309
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|81299776|ref|YP_399984.1| porphobilinogen deaminase [Synechococcus elongatus PCC 7942]
gi|161621822|ref|YP_171285.2| porphobilinogen deaminase [Synechococcus elongatus PCC 6301]
gi|123755408|sp|Q31PM2|HEM3_SYNE7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81168657|gb|ABB56997.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 7942]
Length = 320
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 157/306 (51%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P RIG+R S LAL + L ++ P + +ST+GD I + L +IG KGL
Sbjct: 7 RPIRIGSRKSQLALVQTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
FT+E+E +++GE+D AVHS KD+PT+L +GL + RED D + H L
Sbjct: 65 FTKELEVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLET 124
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL
Sbjct: 125 LPEGTVIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLS 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + GQGA+ IE +P+ EL+K + HE T ERAFL EL
Sbjct: 185 MADRIHQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLREL 244
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I TL G+V + DG+ +G D +G A ++
Sbjct: 245 EGGCQVPIGVNTAIADGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQG 304
Query: 301 NKNVFN 306
K + +
Sbjct: 305 AKEILD 310
>gi|328871819|gb|EGG20189.1| porphobilinogen deaminase [Dictyostelium fasciculatum]
Length = 318
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/315 (35%), Positives = 160/315 (50%), Gaps = 10/315 (3%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M KK IG+R S LAL L ++H +N + L T GDR+ N L++IG
Sbjct: 1 MSDKKTVYIGSRKSQLALVQTHHVIDRLKELHG-SKYNFELKTLDTVGDRVLNVALSKIG 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KGLFT+E+E +ISG+ID AVHS KD+PTK +GL + A RE+ D FI + ++
Sbjct: 60 DKGLFTKELEDLMISGDIDIAVHSLKDIPTKFPEGLGLGAITKRENCLDAFIVNASKHRP 119
Query: 120 -----DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAY 173
+L ++IG+SSLRR + L R + D RG + TR KL + ++LA
Sbjct: 120 TCTLAELPEGAIIGSSSLRRVSQLKRAYPHLQFKDIRGNLNTRFEKLEKSGEYDGMILAV 179
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG++RL I EI+ + GQGA+ IE N+P L++ +N +DT E
Sbjct: 180 AGLERLGWTDRITEIIQPTVSLYAVGQGALGIECRSNDPLIMSLLEPLNDKDTASCCIAE 239
Query: 234 RAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
RA L+EL+G C I + + GIVL DG +S G +GR+
Sbjct: 240 RAMLSELEGGCHVPIGVISSIDVERQLITLEGIVLNLDGSRAIRLSHTGPLASCHQVGRE 299
Query: 292 AAQYIRFISNKNVFN 306
AQ + K + N
Sbjct: 300 LAQQLIEKGAKEILN 314
>gi|332968975|gb|EGK08019.1| hydroxymethylbilane synthase [Kingella kingae ATCC 23330]
Length = 312
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 163/303 (53%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A ++ L ++ P I I+ ++T+GD+I ++TL++IGGKGL
Sbjct: 5 KKLTIASRESALAMWQARHIQAQLQALY--PDCQIDILGMTTQGDQILDKTLSKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L D AVHS KD+P L +G + A R + D F+S+ L+DL
Sbjct: 63 FIKELETALQENRADLAVHSIKDVPMDLPEGFALVAIGERANPFDAFVSNQYARLEDLPQ 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ +
Sbjct: 123 GAIVGTSSLRREAQLRARFPHLNIKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L+ D P+ GQGA+ IE + + + +NH T V ERA L GS
Sbjct: 183 RIRSVLSPADSLPAAGQGALGIEIAAHRADLVQTLLPLNHAKTAACVTAERALARALGGS 242
Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ +A + + L +G+V DG + V A +GR A+ + K
Sbjct: 243 CQVPLAAYCTADDNGVLTLHGLVAHPDGSVMLTVQAQAPAEYADALGRAVAKKLADDGAK 302
Query: 303 NVF 305
+V
Sbjct: 303 DVI 305
>gi|308803813|ref|XP_003079219.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri]
gi|116057674|emb|CAL53877.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri]
Length = 441
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 119/304 (39%), Positives = 171/304 (56%), Gaps = 4/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ TR L + + I + T GD++ ++ L +IGGKGL
Sbjct: 47 VRIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKGL 106
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL DL
Sbjct: 107 FTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLDDLPE 166
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ +
Sbjct: 167 GAVVGTASLRRQSQLLYKYPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLAQ 226
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
K I+ E P+ QGAI I + K + +NHEDT +V ERAFLA LDGS
Sbjct: 227 HAKLIIPTEQMLPAVAQGAIGITCRGGDDKQLAFLAKLNHEDTRMAVEGERAFLAALDGS 286
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI--GRDAAQYIRFISN 301
C++ IA + + F G++ + DGK E +R G A + G DA ++ +
Sbjct: 287 CRTPIAAHCHNVDGKMQFRGLIASLDGKEVLETTREGAWDAASLLAAGTDAGAELKGKAP 346
Query: 302 KNVF 305
+ F
Sbjct: 347 ADFF 350
>gi|229175146|ref|ZP_04302662.1| Porphobilinogen deaminase [Bacillus cereus MM3]
gi|228608282|gb|EEK65588.1| Porphobilinogen deaminase [Bacillus cereus MM3]
Length = 309
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDTVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG I + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--NPEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|254455286|ref|ZP_05068715.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082288|gb|EDZ59714.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211]
Length = 305
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 107/300 (35%), Positives = 175/300 (58%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K IG+R S LAL +A + + ++ I +I+I ++TKGD++ + L+E+GGK
Sbjct: 1 MNKKITIGSRGSKLALIYAQKAKDKIIQNTNIKDEDIIIKEITTKGDQVQDMRLSEVGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF+ IEK+L +ID AVH+ KDMP GL+ + +L R D R++ I+ + + L +L
Sbjct: 61 GLFSTNIEKELQDKKIDIAVHALKDMPAIETVGLRTNTFLKRNDPREILIAQSGKKLNEL 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++S+IGTSS RR+ + + RSDI+ RG ++TR+ KLN+ AI+L+YAGIK L+
Sbjct: 121 KINSIIGTSSYRREFQIKKIRSDINCKLIRGNVDTRIKKLNDGLYDAIILSYAGIKSLEI 180
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I EI +IE+ PS GQG I ++ N+ + ++ IN ++T + ER L L+
Sbjct: 181 EDKITEIFSIEEIIPSAGQGIIALQCRNNDIEIISVLDEINDKETSSMAHAERNVLKVLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C++AI A + + + + DGK ++ DA +G++ + ++ SN
Sbjct: 241 GDCETAIGTHAIIEEDKIILQAELFSLDGKQRFFEKKSSKINDARELGKELGEILKTKSN 300
>gi|120610679|ref|YP_970357.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1]
gi|120589143|gb|ABM32583.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1]
Length = 318
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 9/303 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H + ++ ++T+GDRI +RTL+++GGKGLF
Sbjct: 17 PIVIATRESRLALWQAEHVQALLRAR----GHAVELLGMTTQGDRILDRTLSKVGGKGLF 72
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL
Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 133 AVVGTSSLRRQVLLQALRPDLVIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLEGR 192
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC
Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDG-KIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299
+A TL G +G + V + +A +G A +R
Sbjct: 253 SVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQISAPVASLPEAEALGSAVAARLRAD 312
Query: 300 SNK 302
+
Sbjct: 313 GAQ 315
>gi|30264532|ref|NP_846909.1| porphobilinogen deaminase [Bacillus anthracis str. Ames]
gi|47529995|ref|YP_021344.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187356|ref|YP_030608.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne]
gi|65321833|ref|ZP_00394792.1| COG0181: Porphobilinogen deaminase [Bacillus anthracis str. A2012]
gi|165871949|ref|ZP_02216590.1| porphobilinogen deaminase [Bacillus anthracis str. A0488]
gi|167640713|ref|ZP_02398973.1| porphobilinogen deaminase [Bacillus anthracis str. A0193]
gi|170708352|ref|ZP_02898796.1| porphobilinogen deaminase [Bacillus anthracis str. A0389]
gi|177653999|ref|ZP_02936040.1| porphobilinogen deaminase [Bacillus anthracis str. A0174]
gi|190566915|ref|ZP_03019831.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I]
gi|227817244|ref|YP_002817253.1| porphobilinogen deaminase [Bacillus anthracis str. CDC 684]
gi|229601857|ref|YP_002868748.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248]
gi|254736568|ref|ZP_05194274.1| porphobilinogen deaminase [Bacillus anthracis str. Western North
America USA6153]
gi|254754796|ref|ZP_05206831.1| porphobilinogen deaminase [Bacillus anthracis str. Vollum]
gi|254757628|ref|ZP_05209655.1| porphobilinogen deaminase [Bacillus anthracis str. Australia 94]
gi|39931467|sp|Q81LC7|HEM3_BACAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800231|sp|C3P9E9|HEM3_BACAA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800232|sp|C3L6Z5|HEM3_BACAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30259190|gb|AAP28395.1| hydroxymethylbilane synthase [Bacillus anthracis str. Ames]
gi|47505143|gb|AAT33819.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181283|gb|AAT56659.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne]
gi|164712239|gb|EDR17775.1| porphobilinogen deaminase [Bacillus anthracis str. A0488]
gi|167511285|gb|EDR86671.1| porphobilinogen deaminase [Bacillus anthracis str. A0193]
gi|170126727|gb|EDS95610.1| porphobilinogen deaminase [Bacillus anthracis str. A0389]
gi|172081054|gb|EDT66132.1| porphobilinogen deaminase [Bacillus anthracis str. A0174]
gi|190561906|gb|EDV15875.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I]
gi|227006938|gb|ACP16681.1| hydroxymethylbilane synthase [Bacillus anthracis str. CDC 684]
gi|229266265|gb|ACQ47902.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248]
Length = 309
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|15838228|ref|NP_298916.1| porphobilinogen deaminase [Xylella fastidiosa 9a5c]
gi|11386846|sp|Q9PCX7|HEM3_XYLFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|9106679|gb|AAF84436.1|AE003989_13 hydroxymethylbilane synthase [Xylella fastidiosa 9a5c]
Length = 305
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 4/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRMLR--PDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + + G+V DG + + +GR AQ + +
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADG-RLVRAELCSAKDEGDMLGRAVAQCLLDAGAAEL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|226326699|ref|ZP_03802217.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198]
gi|225204920|gb|EEG87274.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198]
Length = 291
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/290 (36%), Positives = 156/290 (53%), Gaps = 2/290 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG
Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQLTH--PGLVVELVPMVTKGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+ +L++
Sbjct: 59 KGLFVKELELALLESRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYNALEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSIVGTSSLRRQCQLKAQRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ L+ E P+ GQGA+ I +N+ + + L +NH T V +RA L
Sbjct: 179 LNERIRTPLSAEQSLPAVGQGAVGIGRQLNDNETRHLFDALNHSPTAILVKIKRAMNTRL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
+G C+ I +A + + F +V + DG+ + N G
Sbjct: 239 EGGCQVPIGTYAIWQDDKILFGALVGSPDGENIFRGELLVTPENDKNRGH 288
>gi|218905666|ref|YP_002453500.1| porphobilinogen deaminase [Bacillus cereus AH820]
gi|228917102|ref|ZP_04080660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929511|ref|ZP_04092530.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935783|ref|ZP_04098595.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229124004|ref|ZP_04253196.1| Porphobilinogen deaminase [Bacillus cereus 95/8201]
gi|254724608|ref|ZP_05186391.1| porphobilinogen deaminase [Bacillus anthracis str. A1055]
gi|226740627|sp|B7JQ57|HEM3_BACC0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218537761|gb|ACK90159.1| porphobilinogen deaminase [Bacillus cereus AH820]
gi|228659306|gb|EEL14954.1| Porphobilinogen deaminase [Bacillus cereus 95/8201]
gi|228823840|gb|EEM69660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830090|gb|EEM75708.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842520|gb|EEM87610.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 309
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|206969979|ref|ZP_03230933.1| porphobilinogen deaminase [Bacillus cereus AH1134]
gi|229192675|ref|ZP_04319634.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876]
gi|206735667|gb|EDZ52835.1| porphobilinogen deaminase [Bacillus cereus AH1134]
gi|228590765|gb|EEK48625.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876]
Length = 309
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|122842|sp|P13446|HEM3_EUGGR RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|18412|emb|CAA33759.1| unnamed protein product [Euglena gracilis]
Length = 480
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 105/322 (32%), Positives = 162/322 (50%), Gaps = 21/322 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+ TR SPLA+ A +S L + P + + P+ST+GD+I + L ++GGKGL
Sbjct: 150 KTVRVATRKSPLAMWQAEFIQSELERL--WPGITVELQPMSTRGDKILDSPLAKVGGKGL 207
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
F +E+E L+ D AVHS KD+P +L +GL + R D D + +SL+D
Sbjct: 208 FVKELETALLENRSDIAVHSTKDVPMELPEGLVLGVICKRHDPCDAIVFPKGSNLKSLED 267
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR+ LL R D+ ++ RG + TRL KL++ AI+LA AG+KRL
Sbjct: 268 LPHGARVGTSSLRRQCQLLLKRPDLKFLELRGNVNTRLAKLDSGDYDAIILAAAGLKRLG 327
Query: 181 KEKV----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
I++ P+ GQGA+ IE N+P+ L++ ++H +V CERA
Sbjct: 328 FSDRVLPGETNIIDPNVMCPAAGQGALSIELRTNDPEIAALLEPLHHIPDAVTVACERAM 387
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-------IFHEVSRNGNR-----CD 284
L+G C+ I+GFA K L V + GK + +G +
Sbjct: 388 NRRLNGGCQVPISGFAQLKDGQLRMEARVGSVTGKGPLIIQSKTFRLPWSGRTWPQLQKE 447
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
+ +G + A + + +
Sbjct: 448 SEALGVEVADMLLADGAQAYLD 469
>gi|75759963|ref|ZP_00740032.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228902993|ref|ZP_04067133.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222]
gi|74492560|gb|EAO55707.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228856669|gb|EEN01189.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222]
Length = 309
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHRLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + T+ +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|229163420|ref|ZP_04291371.1| Porphobilinogen deaminase [Bacillus cereus R309803]
gi|228619989|gb|EEK76864.1| Porphobilinogen deaminase [Bacillus cereus R309803]
Length = 309
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS +S KDLA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGESFKDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHMNDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVAGT--DPVEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|308070414|ref|YP_003872019.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681]
gi|305859693|gb|ADM71481.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681]
Length = 308
Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 164/305 (53%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP--HNIVIIPLSTKGDRITNRTLTEIGG 60
+ +G+R S LAL L + V+ + TKGDRI + TL+++GG
Sbjct: 1 MRTIVVGSRQSALALTQTGHVIEDLNALCAEQGMDLQFVVKKILTKGDRILDVTLSKVGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+D
Sbjct: 61 KGLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPHREDPRDCLITLGAKSLED 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+
Sbjct: 121 LPQGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I + D P+ GQGA+ IE ++ + L+++ N DT +V ER FL L
Sbjct: 181 WKERITSYIPEADCLPAVGQGALGIECRASDEELLALLRLYNDRDTSATVAAERTFLGVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A G + G+V + DG++ + + G D +G A +
Sbjct: 241 NGGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQG--NDPQKLGEAVAASLIAKG 298
Query: 301 NKNVF 305
+ +
Sbjct: 299 AEQIL 303
>gi|196034473|ref|ZP_03101882.1| porphobilinogen deaminase [Bacillus cereus W]
gi|228948178|ref|ZP_04110462.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|195993015|gb|EDX56974.1| porphobilinogen deaminase [Bacillus cereus W]
gi|228811536|gb|EEM57873.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 309
Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAYINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG I + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|229087029|ref|ZP_04219183.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44]
gi|228696292|gb|EEL49123.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44]
Length = 309
Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S +LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFAELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+ +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGATLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ VI E L+ P+ GQGA+ IE ++ +L+ IN T +V+ ER FL +L+
Sbjct: 179 DDVITEHLDETLCVPAVGQGALAIECRGDDKDLLQLLSHINDGVTERTVSAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + + +V + +G + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLQENNEIELTALVGSVEGSVLLKETVTG--MDPEQVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|229093561|ref|ZP_04224662.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42]
gi|228689770|gb|EEL43576.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42]
Length = 309
Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG I + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|195953610|ref|YP_002121900.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1]
gi|195933222|gb|ACG57922.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1]
Length = 285
Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 114/293 (38%), Positives = 172/293 (58%), Gaps = 9/293 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LAL A +S L + I ++ ++T GD+I + L++IGGKGLF
Sbjct: 2 KLRLGTRKSKLALWQANFVKSKLEAL----GLEIELVLITTTGDKILDTPLSKIGGKGLF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ EID AVHS KD+P + +GL + +L RED +D F+S + ++L +L +
Sbjct: 58 VKEIENALMEDEIDFAVHSLKDVPAFIPQGLVVDVFLEREDPKDAFVSKSYKTLNELPPN 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS+RRK LL+ R D+++ D RG ++TRL KL + AI+LA AG+KRL E V
Sbjct: 118 AKIGTSSIRRKVQLLQRRKDLTIEDLRGNVDTRLKKLEDGLYDAIILASAGLKRLGFEGV 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L+ F P+ GQG + IE +N + ++K INHE T+ ER+FL ++GSC
Sbjct: 178 ISSYLD---FIPAVGQGIVAIEYKASNKELSNILKQINHEPTYICALAERSFLETVEGSC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ + A + G + DG + E++ G D I +G+D A+ +
Sbjct: 235 QIPMGAHATLAQDLIKIRGFIANEDGTNYRELTLEGK--DPIGLGKDLAKNLL 285
>gi|118479630|ref|YP_896781.1| porphobilinogen deaminase [Bacillus thuringiensis str. Al Hakam]
gi|196039380|ref|ZP_03106686.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99]
gi|196044836|ref|ZP_03112070.1| porphobilinogen deaminase [Bacillus cereus 03BB108]
gi|225866445|ref|YP_002751823.1| porphobilinogen deaminase [Bacillus cereus 03BB102]
gi|229186706|ref|ZP_04313864.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1]
gi|158512516|sp|A0RJ81|HEM3_BACAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800233|sp|C1ETR0|HEM3_BACC3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118418855|gb|ABK87274.1| hydroxymethylbilane synthase [Bacillus thuringiensis str. Al Hakam]
gi|196024324|gb|EDX62997.1| porphobilinogen deaminase [Bacillus cereus 03BB108]
gi|196030007|gb|EDX68608.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99]
gi|225787726|gb|ACO27943.1| hydroxymethylbilane synthase [Bacillus cereus 03BB102]
gi|228596719|gb|EEK54381.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1]
Length = 309
Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|92116183|ref|YP_575912.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14]
gi|123387219|sp|Q1QQP5|HEM3_NITHX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91799077|gb|ABE61452.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14]
Length = 316
Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 137/299 (45%), Positives = 190/299 (63%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR S LALA A E R L H++ P IVI + T GD I +R L ++GGKGLFT+
Sbjct: 12 TIGTRGSALALAQANEVRDRLARAHQVAPERIVIKTIRTSGDAIQDRPLFDVGGKGLFTK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RD FIS A SL DL S+
Sbjct: 72 EIEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSI 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT+SLRR+A++LR R D+ V RG +ETRL KL +A A LLA AG+ RL +
Sbjct: 132 VGTASLRRQAMVLRLRPDLKVSVIRGNVETRLRKLVAGEADATLLALAGLNRLGLQDRAT 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 192 RILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRT 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I G G ++F G++++ DG +E +R G R DA +G DAA+ +R + + F
Sbjct: 252 PIGGHCRVNGDRIHFRGLIISPDGTQSYETTREGARADAAALGADAARELRERAGEKFF 310
>gi|15241573|ref|NP_196445.1| HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase
[Arabidopsis thaliana]
gi|2495179|sp|Q43316|HEM3_ARATH RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10 [Arabidopsis thaliana]
gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|332003894|gb|AED91277.1| Porphobilinogen deaminase [Arabidopsis thaliana]
Length = 382
Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 133/306 (43%), Positives = 186/306 (60%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL
Sbjct: 75 IRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA +L +L
Sbjct: 135 FTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPA 194
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L + V +FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 195 GSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG
Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 315 SCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSR 374
Query: 300 SNKNVF 305
+ F
Sbjct: 375 AGPGFF 380
>gi|319942681|ref|ZP_08016988.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B]
gi|319803764|gb|EFW00699.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B]
Length = 309
Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 2/299 (0%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I TR SPLA+ A ++ L D + P + ++ ++T+GD+I +RTL+++GGKGLF +
Sbjct: 8 VIATRESPLAMWQALHVQALLRDRY--PGAEVELLGMTTRGDQILDRTLSKVGGKGLFVK 65
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E ++ G D AVHS KD+P +L +G ++ A RED RD F+S SL D+ +
Sbjct: 66 ELEAAMLEGRADLAVHSLKDVPMELPEGFELVAVSEREDPRDAFVSPKYASLDDMPAGAR 125
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT+SLRR+ +L + V+ RG + TRL KL+ + A+++A AG+KRL I+
Sbjct: 126 VGTASLRRELMLRMRYPHLEVLPVRGNVGTRLRKLDEGQFDALVMASAGLKRLGLGDRIR 185
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+I+ E P+PGQGA+ IE + K + + IN +T ERA L GSC+
Sbjct: 186 QIIPAEVSLPAPGQGALGIEIRKGDEKMEAALGFINSPETRACCMAERAVSRALGGSCQV 245
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A + L+ +V G + + + +R ++
Sbjct: 246 PLAAYAVVENGELWLRALVGNHKEGKAAFTQARGPLAEPEALAARVVEDLRRQGAEDYL 304
>gi|294507567|ref|YP_003571625.1| Porphobilinogen deaminase [Salinibacter ruber M8]
gi|294343895|emb|CBH24673.1| Porphobilinogen deaminase [Salinibacter ruber M8]
Length = 323
Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 101/310 (32%), Positives = 166/310 (53%), Gaps = 8/310 (2%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P +GTR S LAL A RS L H + + ++T+GD T+ ++EIG
Sbjct: 1 MSISDPLVLGTRGSELALRQANVVRSRLEAA----GHRVELETITTRGDEATDTPISEIG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--AQS 117
+ +FT+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H
Sbjct: 57 DEAVFTKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGH 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L DL + + T+SLRR A LL WRSD+ V+ RG ++TRL KL+ + ++LA AG+
Sbjct: 117 LHDLPEGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLSESDWTGMVLAVAGLV 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL-VKVINHEDTWDSVNCERAF 236
RL I++ ++ P+ GQGA+ I + ++L + ++H + + N ERAF
Sbjct: 177 RLGLSLHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAF 236
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L ++ G C+ + +A+ TL + A DG + R D +GR+ A +
Sbjct: 237 LKKVGGGCQVPLGAWAHIDDGTLVLDACIAALDGSEHYRDERRCAPEDGAAVGRELAADL 296
Query: 297 RFISNKNVFN 306
+ ++ +
Sbjct: 297 LAMGGDHILD 306
>gi|42783601|ref|NP_980848.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987]
gi|55976457|sp|Q72ZW2|HEM3_BACC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|42739530|gb|AAS43456.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987]
Length = 309
Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|71899004|ref|ZP_00681170.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|71731250|gb|EAO33315.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
Length = 305
Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 4/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIATLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + + G+V DG + + +GR AQ + +
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADG-RLVRAELCSAKDEGDMLGRAVAQCLLDAGAAEL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|229147034|ref|ZP_04275394.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24]
gi|228636422|gb|EEK92892.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24]
Length = 309
Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|229111935|ref|ZP_04241479.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15]
gi|228671499|gb|EEL26799.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15]
Length = 309
Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEEYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|296446253|ref|ZP_06888200.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b]
gi|296256290|gb|EFH03370.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b]
Length = 308
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 128/297 (43%), Positives = 168/297 (56%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR SPLALA E R L P + I + T GD I +R L E GG
Sbjct: 1 MTTAILTIGTRGSPLALAQTHEVRRLLAAALGAPEEALPIEIIRTTGDMIQDRPLAESGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT E++ L G ID AVHS+KD+PT L + I+ +LPRED+RD +I SL D
Sbjct: 61 KGLFTRELDIALAEGRIDLAVHSSKDLPTHLPPEIAIAGFLPREDVRDAWIGRGGASLAD 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR A + R R D+SV RG +ETRL+K+ + + LLA AG+KRL
Sbjct: 121 LPQGAVVGTASLRRGAQVKRLRPDVSVTLLRGNVETRLHKVESGEVDGTLLALAGLKRLG 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
IL +EDF P+ GQGAI I + + ++ + I T ++ ERAFL L
Sbjct: 181 LADKATAILPLEDFLPAAGQGAIAITKRAGDARTRDALAPILDAATGAALAAERAFLTVL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
DGSC++ IA A G + F+G+ L +DG +E R G DA +G DAA I
Sbjct: 241 DGSCRTPIAAHARVDGDAMEFHGLALRADGSEIYEARRRGAAIDAARLGDDAANEIL 297
>gi|49478646|ref|YP_038514.1| porphobilinogen deaminase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|55976410|sp|Q6HD62|HEM3_BACHK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49330202|gb|AAT60848.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 309
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG I + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|254488942|ref|ZP_05102147.1| porphobilinogen deaminase [Roseobacter sp. GAI101]
gi|214045811|gb|EEB86449.1| porphobilinogen deaminase [Roseobacter sp. GAI101]
Length = 297
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 123/291 (42%), Positives = 165/291 (56%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L +P I+ + GD I +R L EIGGKGLFT EIE+ L++G+
Sbjct: 1 MAQAVETRARLSAAFDLPLTAFEIVVIKVTGDMIQDRPLKEIGGKGLFTREIEEDLLAGK 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KDMPT GL + YLPRED RD F++ +L L +V+GTSSLRR+A
Sbjct: 61 IDIAVHSMKDMPTVQPGGLLLDTYLPREDPRDAFVAPLMSALDQLTEGAVVGTSSLRRRA 120
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D+ V++FRG ++TRL KL + A LA AG+ RL E V ++ D P
Sbjct: 121 QLLHKRPDLQVVEFRGNVQTRLRKLADGVAECTFLAMAGLNRLGMENVPATPIDDTDMLP 180
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QGAI IE + + L+ I+ T + ERAFL LDGSC++ IAG A G
Sbjct: 181 AVAQGAIGIERRAGDLDTEALLAAIHDTPTGQRLIAERAFLLTLDGSCETPIAGLATLDG 240
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
TL+ G VL DG R+G D +G D A+ + + N F++
Sbjct: 241 DTLHLRGEVLRPDGSEVISGDRSGPIGDGGQMGVDLARELLSQAGPNFFDW 291
>gi|283780135|ref|YP_003370890.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068]
gi|283438588|gb|ADB17030.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068]
Length = 311
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 173/301 (57%), Gaps = 4/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR SPLA A R L+ ++ +I ++T+GD+ T++ L +IGG+GLF
Sbjct: 6 KLRLGTRASPLARWQADWVRDQLIAA----GIDVEMILITTEGDQQTSQPLGQIGGQGLF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EI+++L++G+ID AVHS KD+PT + GL ++A RED D+ I SL L
Sbjct: 62 TKEIQRRLLAGDIDLAVHSLKDLPTLPIDGLSLAAVPEREDTADILIGPAGTSLATLPSG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT SLRRKA LL R+D+ ++D RG ++TRL KL+ + HAI+LA AG+KRLK +
Sbjct: 122 AKIGTGSLRRKAQLLHARADLEILDIRGNVDTRLRKLDEGQYHAIILAAAGLKRLKLDDR 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L P+ GQGA+ IE+ ++P ++L+ ++H T +V ER+ LA L C
Sbjct: 182 MTERLEAPLMLPAVGQGALGIESRSDDPTTRKLLAPLSHAPTLQAVIAERSLLAALRAGC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A L +VL+ DG+ S DA +G + A+ +R +
Sbjct: 242 LAPVGAHAQVVDGQLTLAAVVLSIDGQSRLFASLTSAPADAAQLGEEVAELLRQQGATEL 301
Query: 305 F 305
Sbjct: 302 L 302
>gi|229019689|ref|ZP_04176496.1| Porphobilinogen deaminase [Bacillus cereus AH1273]
gi|229025928|ref|ZP_04182320.1| Porphobilinogen deaminase [Bacillus cereus AH1272]
gi|228735374|gb|EEL85977.1| Porphobilinogen deaminase [Bacillus cereus AH1272]
gi|228741596|gb|EEL91789.1| Porphobilinogen deaminase [Bacillus cereus AH1273]
Length = 309
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLKEDDAIELTALVGSMDGSVLLKETVVGT--DPKQVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|300087569|ref|YP_003758091.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527302|gb|ADJ25770.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 301
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 155/304 (50%), Gaps = 3/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+G+R S LALA A ++ L P I+ +ST+GDR ++ E+ G G
Sbjct: 1 MRKIRLGSRSSRLALAQAEYLQARLRAA--FPEVEFDIVRISTQGDRNRLVSMGELPGVG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F +EIE L +GE D AVHS KD+P +L ++A RED RDV IS + + L
Sbjct: 59 FFVKEIESALAAGEADIAVHSLKDVPVELPPEFILAAVPEREDTRDVLISRGRKLDQ-LP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +V+G+ SLRR + R D+ V RG IETR+ + + A++LA AG+ RL E
Sbjct: 118 VGAVVGSDSLRRSFQIRARRPDVEVRSIRGNIETRIKAVEEGRVDAVILAAAGLHRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L + +F P PGQ A+ IE N+ ++E +NH T +V ER+FL L G
Sbjct: 178 TRIDEYLPLTEFLPPPGQAALGIEVRKNDDFSRETAGAVNHPPTCLAVTAERSFLRRLGG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C++ IA +G L G+V G+ S +G A +G A+ I
Sbjct: 238 GCRAPIAALGTVEGDVLTLRGMVADEAGRNIISRSLSGTASAAEAVGGALAEMILEAGAN 297
Query: 303 NVFN 306
N
Sbjct: 298 KYIN 301
>gi|268679946|ref|YP_003304377.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946]
gi|268617977|gb|ACZ12342.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946]
Length = 314
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL + ++ L H P + + + TKGD+I + L +IGGKG
Sbjct: 1 MKKLIIATRGSKLALWQSEHVKAELEKAH--PHLAVELSIMMTKGDKILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ GE AVHS KD+P + +GL++ RED+RD +S L+DL
Sbjct: 59 LFTKELEEAMLRGEAHIAVHSLKDVPMEFPEGLKLGVITKREDVRDAMLSEKYGCLEDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT+SLRR+ LL+ R D + + RG + TR+ KL + AI+LA AGIKRL +
Sbjct: 119 QGAVVGTTSLRRRMQLLKLRPDFVIKNLRGNVNTRIRKLKEGEFDAIILASAGIKRLGLQ 178
Query: 183 KVIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ I E P+ GQ A+ IE N + + LV V+ ED ER F+ L
Sbjct: 179 EEVRYFTPISKEVMIPASGQAALGIEIVDNA-EVERLVSVLKDEDAMIETRVERDFVTLL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A +L+ I+ DG +G R + +G+ AQ +
Sbjct: 238 EGGCQVPIGVNAEVTQESLHVKAILGLPDGSQMMCEVMSGKREEFETLGKVLAQKVIDKG 297
Query: 301 NKNVF 305
K +
Sbjct: 298 AKELL 302
>gi|218899632|ref|YP_002448043.1| porphobilinogen deaminase [Bacillus cereus G9842]
gi|228967567|ref|ZP_04128593.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|226740628|sp|B7IIX5|HEM3_BACC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218545857|gb|ACK98251.1| porphobilinogen deaminase [Bacillus cereus G9842]
gi|228792146|gb|EEM39722.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 309
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + T+ +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|52141043|ref|YP_085787.1| porphobilinogen deaminase [Bacillus cereus E33L]
gi|61213349|sp|Q633Y0|HEM3_BACCZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51974512|gb|AAU16062.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus
cereus E33L]
Length = 309
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|30022552|ref|NP_834183.1| porphobilinogen deaminase [Bacillus cereus ATCC 14579]
gi|218235229|ref|YP_002369271.1| porphobilinogen deaminase [Bacillus cereus B4264]
gi|229129756|ref|ZP_04258723.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4]
gi|229152666|ref|ZP_04280854.1| Porphobilinogen deaminase [Bacillus cereus m1550]
gi|296504955|ref|YP_003666655.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171]
gi|39931461|sp|Q817R0|HEM3_BACCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740629|sp|B7HE96|HEM3_BACC4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|29898110|gb|AAP11384.1| Porphobilinogen deaminase [Bacillus cereus ATCC 14579]
gi|218163186|gb|ACK63178.1| hydroxymethylbilane synthase [Bacillus cereus B4264]
gi|228630812|gb|EEK87453.1| Porphobilinogen deaminase [Bacillus cereus m1550]
gi|228653672|gb|EEL09543.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4]
gi|296326007|gb|ADH08935.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171]
Length = 309
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NDVITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|28199044|ref|NP_779358.1| porphobilinogen deaminase [Xylella fastidiosa Temecula1]
gi|182681767|ref|YP_001829927.1| porphobilinogen deaminase [Xylella fastidiosa M23]
gi|32129567|sp|Q87CC9|HEM3_XYLFT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059005|sp|B2I5K8|HEM3_XYLF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28057142|gb|AAO29007.1| hydroxymethylbilane synthase [Xylella fastidiosa Temecula1]
gi|182631877|gb|ACB92653.1| porphobilinogen deaminase [Xylella fastidiosa M23]
gi|307580196|gb|ADN64165.1| porphobilinogen deaminase [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 305
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 4/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRKCVIAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + + G+V DG + + +GR AQ + +
Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADG-RLVRAELCSAKDEGDMLGRAVAQCLLDAGAAEL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|229048181|ref|ZP_04193750.1| Porphobilinogen deaminase [Bacillus cereus AH676]
gi|228723168|gb|EEL74544.1| Porphobilinogen deaminase [Bacillus cereus AH676]
Length = 309
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 NDVITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAYINDTITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|171463846|ref|YP_001797959.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193384|gb|ACB44345.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 321
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A + L ++ P ++ I+ ++T+GD+I +R L+++GGKGL
Sbjct: 14 KRLVIASRESRLAMWQAEHVQDCLKKLY--PDCDVQILGMTTRGDQILDRALSKVGGKGL 71
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L G D AVHS KD+P + +G ++ + RED RD F+S+ SL+DL +
Sbjct: 72 FVKELETALEDGRADLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEDLPI 131
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+++L + + RG ++TR+ KL+ + AI+LA AG+KRL E
Sbjct: 132 GAIVGTSSLRRESVLRAKFPHLVIQPLRGNLDTRMGKLDKGEYQAIILAAAGLKRLGLES 191
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L + + P+ GQGA+ IET +P ++ + +N T +V+ ER +L GS
Sbjct: 192 RIRAFLPYDPYTPAAGQGALGIETLSKHPNIKQWLAPLNDLPTLFAVSAERMVSRQLGGS 251
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFIS 300
C+ +A A + + V ++DGK + + DA +G AQ +
Sbjct: 252 CEVPLAAHAVRDQNQMQIRSFVASTDGKAICLAHGSALVESVEDAEALGLAVAQDLLSQG 311
Query: 301 NKNVF 305
++
Sbjct: 312 AADLI 316
>gi|152990765|ref|YP_001356487.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2]
gi|166217777|sp|A6Q3S1|HEM3_NITSB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151422626|dbj|BAF70130.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2]
Length = 310
Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 158/304 (51%), Gaps = 10/304 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + ++ L + + + TKGD+I + L IGGKGLF
Sbjct: 2 KLTIATRGSKLALWQSNHIKAQLESF----GYEVELKIFKTKGDKILDTPLALIGGKGLF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E ++ GE D AVHS KD+PT+L +GL + A RE D +S ++L DL +
Sbjct: 58 TKELEDAMLRGEADLAVHSLKDVPTELPEGLVLGAITKREMTNDSLLSEQYETLADLPPN 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK--E 182
+V+GT+SLRR+ LL R DI + D RG ++TR+NKL N + AI+LAYAG+KRL
Sbjct: 118 AVVGTTSLRRRMQLLHLRPDICIKDLRGNVDTRINKLKNGEFDAIILAYAGLKRLGILES 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ P+ GQ A+ IE P ++VK +N E + ER F+ L G
Sbjct: 178 VRYVHPIDENTMIPAMGQAALGIEC---RPDVVDVVKKLNDEKSAIETFIERDFIDRLQG 234
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C+ I A + + + ++ DG + G++ + +G++ A+ +
Sbjct: 235 GCQVPIGVRASLLENNDIIVKAVIGLPDGSELLKDKIFGSKENYHELGKELAESMIDNGA 294
Query: 302 KNVF 305
K +
Sbjct: 295 KELL 298
>gi|324328367|gb|ADY23627.1| porphobilinogen deaminase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 309
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLINQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|387506|gb|AAA39890.1| porphobilinogen deaminase (housekeeping) [Mus musculus]
Length = 400
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 56 KMRVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEK 113
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L
Sbjct: 114 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTL 173
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++
Sbjct: 174 ETLPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 233
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 234 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 293
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 294 RHLEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 353
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 354 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 391
>gi|27117223|emb|CAD48146.1| porphobilinogen deaminase [Bacillus megaterium]
Length = 310
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L P I + TKGD+I N TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L
Sbjct: 59 LFVKEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+
Sbjct: 119 SGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWS 178
Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
K + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++
Sbjct: 179 KDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEME 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+ G + +V + DGK ++ G D I IG +AA+ +
Sbjct: 239 GGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--DPIAIGSEAAERLTSQG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKLLID 302
>gi|75674669|ref|YP_317090.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255]
gi|123745784|sp|Q3SVF3|HEM3_NITWN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|74419539|gb|ABA03738.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255]
Length = 316
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 136/299 (45%), Positives = 190/299 (63%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+
Sbjct: 12 TIGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTK 71
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL +
Sbjct: 72 EIEEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGAT 131
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT+SLRR+A++L+ R D+ V RG +ETRL K++ +A A LLA AG+ RL +
Sbjct: 132 VGTASLRRQAMVLKLRPDLKVNSLRGNVETRLRKISVGEADATLLALAGLNRLGLQDKAT 191
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++
Sbjct: 192 RILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDPETEVALSAERSFLALLDGSCRT 251
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I G G + F G++++ DG F+E +R G R DA +G DAA +R + + F
Sbjct: 252 PIGGHCRVNGDRIDFRGLIISPDGTEFYETTREGARADAAALGADAAHELRERAGEKFF 310
>gi|228910299|ref|ZP_04074116.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200]
gi|228849359|gb|EEM94196.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200]
Length = 309
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + T+ +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|294501421|ref|YP_003565121.1| porphobilinogen deaminase [Bacillus megaterium QM B1551]
gi|294351358|gb|ADE71687.1| porphobilinogen deaminase [Bacillus megaterium QM B1551]
Length = 310
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 167/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L P I + TKGD+I N TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L
Sbjct: 59 LFVKEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+
Sbjct: 119 SGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWS 178
Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
K + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++
Sbjct: 179 KDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEME 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+ G + +V + DGK ++ G + + IG +AA+ +
Sbjct: 239 GGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--NPVAIGSEAAERLTSQG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKLLID 302
>gi|109108914|ref|XP_001101764.1| PREDICTED: porphobilinogen deaminase isoform 6 [Macaca mulatta]
Length = 391
Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 47 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 104
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 105 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 164
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++
Sbjct: 165 ETLPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 224
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 225 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 284
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 285 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQ 344
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 345 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 382
>gi|296216375|ref|XP_002754553.1| PREDICTED: porphobilinogen deaminase [Callithrix jacchus]
Length = 361
Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL
Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352
>gi|222151551|ref|YP_002560707.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus
JCSC5402]
gi|254800255|sp|B9E743|HEM3_MACCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222120676|dbj|BAH18011.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus
JCSC5402]
Length = 307
Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 172/305 (56%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L H P I I + TKGD+I N L+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQSQQFIDQLKRKH--PNLEIEIKEIVTKGDQIVNVQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L G ID A+HS KD+P+ L +GL + RED RD +I+ L +L
Sbjct: 59 LFVKEIEQALYDGTIDFAIHSLKDVPSVLPEGLTLGCIPVREDARDAYIAKHHIPLHELK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A LL + + RG I+TRL KL + AI+LA AG+ R+ +
Sbjct: 119 PGSIVGTSSLRRGAQLLDQYPHLEIKWIRGNIDTRLAKLRDEDYDAIILAAAGLNRMGWD 178
Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
K ++ E LN E P+ GQGA+ IE ++ + L+K ++ E+T ER FL +D
Sbjct: 179 KSIVTEYLNPELMLPAIGQGALGIECRSDDAEVLALLKSVHDEETELCTEAERTFLRLMD 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ IAG A G ++ F G++++ DGK ++V+ +G + I IG A+ +
Sbjct: 239 GSCQVPIAGHATMVGESIEFTGLIMSPDGKEKYKVTHSG--GNPIEIGTQVAKAMEQNGA 296
Query: 302 KNVFN 306
K +
Sbjct: 297 KAIIE 301
>gi|21592624|gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 382
Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 132/306 (43%), Positives = 185/306 (60%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL
Sbjct: 75 IRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G ID AVHS K +PT L + + LPRED+RD FI TA +L +L
Sbjct: 135 FTKEIDEALINGHIDIAVHSMKYVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPA 194
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L + V +FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 195 GSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG
Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 315 SCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSR 374
Query: 300 SNKNVF 305
+ F
Sbjct: 375 AGPGFF 380
>gi|11386777|sp|O69110|HEM3_PAEMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3172405|gb|AAC18587.1| porphobilinogen deaminase [Paenibacillus macerans]
Length = 324
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 113/325 (34%), Positives = 169/325 (52%), Gaps = 26/325 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETR---SSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M K+ +GTR S LAL + L H +P I + TKGDRI + TL++
Sbjct: 1 MTKRTIVVGTRQSQLALTQTEQVIGDLKELCRAHGLP-FEFEIKKIVTKGDRILDVTLSK 59
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IGGKGLF +EIE+ ++ GEID AVHS KDMP+ L +GL R+D RD IS +
Sbjct: 60 IGGKGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLINGGVPLRKDPRDALISRSGLH 119
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L + +GTS+LRR + LL +R D+ + RG I++RL KL AI+LA AG++
Sbjct: 120 LHELPQGARVGTSTLRRSSQLLAYRPDLVLEPVRGNIDSRLRKLEEEGFDAIILAAAGLQ 179
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E + L+ + P+ GQGA+ IE N+ + ++++ + N DT +V ER FL
Sbjct: 180 RMGWENRVTAYLSADVCLPAVGQGALGIECRENDAELRDVLSLYNDPDTALTVAAERRFL 239
Query: 238 AELDGSCKSAIAGFAYCK--GST------------------LYFYGIVLASDGKIFHEVS 277
A L+G C+ IA +A + G + G+V ++DG+ + E
Sbjct: 240 AVLNGGCQVPIAAYANLERAGGQAPEEGGRAAASQAPAALRIRLTGMVGSADGRGYFEGE 299
Query: 278 RNGNRCDAINIGRDAAQYIRFISNK 302
R D + G A + +
Sbjct: 300 CR--REDPVAFGERIAGLLLAQGGR 322
>gi|122844|sp|P22907|HEM3_MOUSE RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 361
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L
Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352
>gi|228954747|ref|ZP_04116769.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229071973|ref|ZP_04205183.1| Porphobilinogen deaminase [Bacillus cereus F65185]
gi|229081729|ref|ZP_04214222.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2]
gi|229180740|ref|ZP_04308078.1| Porphobilinogen deaminase [Bacillus cereus 172560W]
gi|228602718|gb|EEK60201.1| Porphobilinogen deaminase [Bacillus cereus 172560W]
gi|228701574|gb|EEL54067.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2]
gi|228711132|gb|EEL63097.1| Porphobilinogen deaminase [Bacillus cereus F65185]
gi|228804945|gb|EEM51542.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 309
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 DEVITEHLDEALCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|47566654|ref|ZP_00237476.1| porphobilinogen deaminase [Bacillus cereus G9241]
gi|228960740|ref|ZP_04122379.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228987716|ref|ZP_04147827.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229158082|ref|ZP_04286152.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342]
gi|47556684|gb|EAL15016.1| porphobilinogen deaminase [Bacillus cereus G9241]
gi|228625401|gb|EEK82158.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342]
gi|228771990|gb|EEM20445.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228798956|gb|EEM45931.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 309
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGITEKTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLINQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|301055971|ref|YP_003794182.1| porphobilinogen deaminase [Bacillus anthracis CI]
gi|300378140|gb|ADK07044.1| porphobilinogen deaminase [Bacillus cereus biovar anthracis str.
CI]
Length = 309
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGVPFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVG--IDPKEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|228941631|ref|ZP_04104178.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974560|ref|ZP_04135126.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981155|ref|ZP_04141455.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407]
gi|228778355|gb|EEM26622.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407]
gi|228784963|gb|EEM32976.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817843|gb|EEM63921.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942243|gb|AEA18139.1| porphobilinogen deaminase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 309
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 DEVITEHLDEALCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|255037032|ref|YP_003087653.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053]
gi|254949788|gb|ACT94488.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053]
Length = 307
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 158/302 (52%), Gaps = 6/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL A+ L I+ + TKGD+I +R+L++IG KG+FT
Sbjct: 3 IKIGTRGSKLALWQAYYVEELLQR----GGVETEIVIIETKGDKILDRSLSKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EE+E +L SG+ID AVHSAKD+ + L +I A+ RE DV +SH
Sbjct: 59 EELEDQLRSGDIDIAVHSAKDLQSHLDDAFEIIAFTEREQANDVLVSHDTTLSLKSGESF 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS RR A+L + I +D RG ++TRL KL + A+LLA+AG+ R++ + I
Sbjct: 119 TVGTSSTRRVAVLKHYYPHIKTVDMRGNLQTRLRKLEEGQCDALLLAFAGVHRMEYDDKI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNP--KAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E L +++F P+ GQG++ IET V K +L +++N+E T + ERAFL L G
Sbjct: 179 AEHLLLDEFTPAVGQGSVAIETAVALDPAKKSKLRELLNNEHTETCLLAERAFLKRLQGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + G A + G +++ DG + G +G A+ +
Sbjct: 239 CSIPVFGMATLHEDEIRMTGGIISLDGTELIRKTETGATAFPQELGTALAEELLAAGADR 298
Query: 304 VF 305
+
Sbjct: 299 IL 300
>gi|294789041|ref|ZP_06754281.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453]
gi|294483143|gb|EFG30830.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453]
Length = 311
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 162/307 (52%), Gaps = 4/307 (1%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + I +R S LA+ A ++ L ++ P ++ I+ ++T+GD+I ++TL++IG
Sbjct: 1 MNNPQSLVIASRESALAMWQAQHIQAQLQQLY--PQCDVSILGMTTQGDQILDKTLSKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E L G D AVHS KD+P L +G + A R + D F+S+ L+
Sbjct: 59 GKGLFVKELEVALQDGRADLAVHSIKDVPMVLPEGFALVAISERANPFDAFVSNHYTRLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL +++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL
Sbjct: 119 DLPKGAIVGTSSLRREAQLRARFPHLTIQPLRGNVQTRLAKLDNGDYDAIILAAAGLERL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I+ +L+ D P+ GQGA+ IE + + +NH T V ERA
Sbjct: 179 ELHNRIRHVLSPADSLPAAGQGALGIEIAAHRTDLIATLLPLNHAKTAACVTAERALARA 238
Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L GSC+ +A + L +G+V DG + + A +GR A+ +
Sbjct: 239 LGGSCQVPLAAYCTADDAGLLTLHGLVAHPDGSVVLNANAQAPAQYADALGRAVAKKLAD 298
Query: 299 ISNKNVF 305
++
Sbjct: 299 DGAMDII 305
>gi|229105103|ref|ZP_04235754.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28]
gi|228678284|gb|EEL32510.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28]
Length = 309
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDNDLLQLLSHMNDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A K + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTKDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|297810933|ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata]
gi|297319187|gb|EFH49609.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 134/306 (43%), Positives = 186/306 (60%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL
Sbjct: 75 IRIGTRGSPLALAQAYETREKLKSKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA SL +L
Sbjct: 135 FTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAASLAELPA 194
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT+SLRRK+ +L + V +FRG ++TRL+KL K A LLA AG+KRL
Sbjct: 195 GSVVGTASLRRKSQILHKYPALRVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG
Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314
Query: 243 SCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299
SC++ IAG+ A + F G+V + DG E SR G D + +G+DA Q +
Sbjct: 315 SCRTPIAGYAAKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSR 374
Query: 300 SNKNVF 305
+ F
Sbjct: 375 AGPGFF 380
>gi|229032118|ref|ZP_04188096.1| Porphobilinogen deaminase [Bacillus cereus AH1271]
gi|228729208|gb|EEL80206.1| Porphobilinogen deaminase [Bacillus cereus AH1271]
Length = 309
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + + G ++ +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NSEEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|206976024|ref|ZP_03236934.1| porphobilinogen deaminase [Bacillus cereus H3081.97]
gi|217961956|ref|YP_002340526.1| porphobilinogen deaminase [Bacillus cereus AH187]
gi|222097910|ref|YP_002531967.1| porphobilinogen deaminase [Bacillus cereus Q1]
gi|229141205|ref|ZP_04269744.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26]
gi|229198593|ref|ZP_04325295.1| Porphobilinogen deaminase [Bacillus cereus m1293]
gi|226740630|sp|B7HQM4|HEM3_BACC7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800234|sp|B9IZ39|HEM3_BACCQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|206745776|gb|EDZ57173.1| porphobilinogen deaminase [Bacillus cereus H3081.97]
gi|217066883|gb|ACJ81133.1| porphobilinogen deaminase [Bacillus cereus AH187]
gi|221241968|gb|ACM14678.1| porphobilinogen deaminase [Bacillus cereus Q1]
gi|228584875|gb|EEK42991.1| Porphobilinogen deaminase [Bacillus cereus m1293]
gi|228642246|gb|EEK98538.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26]
Length = 309
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 162/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKEKVVGT--DPEKVGLEAADRLINQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|228993205|ref|ZP_04153126.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442]
gi|228999254|ref|ZP_04158834.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17]
gi|229006801|ref|ZP_04164434.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4]
gi|228754423|gb|EEM03835.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4]
gi|228760451|gb|EEM09417.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17]
gi|228766531|gb|EEM15173.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442]
Length = 309
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 162/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L+ EID AVHS KDMP L GL I R D RD FIS +S +DLA
Sbjct: 59 LFVKEIEHALLMKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFEDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 DDVITEHLDETLCVPAVGQGALAIECREDDADLLQLLSHMNDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A K + +V + DG + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLQKNDEIELTALVGSMDGSVLLKEIVTG--VNPEQVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|255635113|gb|ACU17914.1| unknown [Glycine max]
Length = 350
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 138/306 (45%), Positives = 190/306 (62%), Gaps = 6/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 43 LRIGTRGSPLALAQAYETRDKLMASHAELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + LPRED+RD FIS +A SL DL
Sbjct: 103 FTKEIDEALINGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GT+SLRRK+ +L ++V +FRG ++TRL KL+ A LLA AG+KRL
Sbjct: 163 GSIVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G
Sbjct: 223 ENVTSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299
SC++ IAG+A + F G+V + DG E SR G D I +G+DA + +
Sbjct: 283 SCRTPIAGYASRNEDGNCLFRGLVASPDGIRVLETSRIGPYAFEDTIKMGKDAGEELLSR 342
Query: 300 SNKNVF 305
+ F
Sbjct: 343 AGPGFF 348
>gi|83815900|ref|YP_445675.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855]
gi|83757294|gb|ABC45407.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855]
Length = 323
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 101/310 (32%), Positives = 164/310 (52%), Gaps = 8/310 (2%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P +GTR S LAL A RS L H + + ++T+GD T+ ++EIG
Sbjct: 1 MSISDPLVLGTRGSELALRQANVVRSRLEAA----GHRVELETITTRGDEATDTPISEIG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--AQS 117
+ +FT+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H
Sbjct: 57 DEAVFTKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGH 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L DL + + T+SLRR A LL WRSD+ V+ RG ++TRL KL + ++LA AG+
Sbjct: 117 LHDLPEGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLGESDWTGMVLAVAGLV 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL-VKVINHEDTWDSVNCERAF 236
RL I++ ++ P+ GQGA+ I + ++L + ++H + + N ERAF
Sbjct: 177 RLGLSLHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAF 236
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L ++ G C+ + +A+ TL + A DG + R D +GR A +
Sbjct: 237 LKKVGGGCQVPLGAWAHIDDGTLVLDACIAALDGSEHYRDERRCAPEDGAAVGRKLAADL 296
Query: 297 RFISNKNVFN 306
+ ++ +
Sbjct: 297 LAMGGDHILD 306
>gi|303257759|ref|ZP_07343771.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47]
gi|331001196|ref|ZP_08324823.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT
11859]
gi|302859729|gb|EFL82808.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47]
gi|329569128|gb|EGG50920.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT
11859]
Length = 310
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 164/306 (53%), Gaps = 3/306 (0%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++ I TR SPLAL A +S L + K P ++ ++ L+TKGD+I + TL++IG
Sbjct: 1 MTQQDHLVIATRESPLALWQAKYVQSCLKE--KFPELDVQLLGLTTKGDKILDVTLSKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLF +E+E ++ G+ AVHS KD+P LL+ ++A + RED RD +SH SL+
Sbjct: 59 GKGLFVKELEAAMLEGKAQIAVHSLKDVPMDLLEPFTLAAVMVREDPRDAVVSHKYASLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
++ SV+GTSSLRR+ ++ + V RG + TRL+KL+N + +++A AG+KRL
Sbjct: 119 EMPAGSVVGTSSLRRELMVRSRFPHLKVEMIRGNVGTRLSKLDNGQYDTLVMAVAGLKRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I+ I+ E P+PGQGAI IE N+ Q+ V+ +N EDT ERA
Sbjct: 179 GLSDRIRSIIPPEVSLPAPGQGAIGIEAVGNDEMTQKYVEALNDEDTRLCTQAERAVSRA 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC+ +A +A ++ +V + G + R +
Sbjct: 239 LGGSCQVPLAAYATIDDGQMFLRALVGNHMTGEYVTAEYTGLANEPEENARKVLDQLIEK 298
Query: 300 SNKNVF 305
K +
Sbjct: 299 GAKRLL 304
>gi|228923217|ref|ZP_04086507.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836423|gb|EEM81774.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 309
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A K + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTKNDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKRG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|218290821|ref|ZP_03494890.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1]
gi|218239179|gb|EED06380.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1]
Length = 305
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 158/304 (51%), Gaps = 4/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+ TR S LAL L V ++P+ T+GD I +R L+E+GGKG
Sbjct: 1 MRILRVATRRSALALTQTNHVVDLLKRVIH--DLKFELVPIRTRGDEIVDRALSEVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +IE L +G D AVHS KD+P +L GL I A RED RD IS T Q L DL
Sbjct: 59 LFVADIEDALATGRADLAVHSLKDVPFELRDGLTIGAVPRREDPRDALISRTGQGLFDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSSLRR+A L R R D+ V RG ++TR+ +L + AI+LA +G+ RL
Sbjct: 119 PGARVGTSSLRRQAALRRLRPDLRVDTLRGNVDTRIRRLEEGQFDAIVLAASGLHRLGLA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+G
Sbjct: 179 EKITEYLPVDRFVPAVGQGALAIECRAEDDEVLRYLGAIADPDATRAVEAERAFLSRLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC+ I +A G L V G + ++ R G+ DA +G A+ + +
Sbjct: 239 SCQVPIGAYAEPVGHELRLIAFVADPSGARYLQLERTGS--DARALGVAVAEEMLRQGAE 296
Query: 303 NVFN 306
Sbjct: 297 TWLE 300
>gi|387507|gb|AAA39891.1| porphobilinogen deaminase (erythroid sp.) [Mus musculus]
Length = 344
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+
Sbjct: 59 LFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 335
>gi|229098938|ref|ZP_04229873.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29]
gi|228684436|gb|EEL38379.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29]
Length = 309
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L+ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA
Sbjct: 59 LFVKEIEHALLMKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178
Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+
Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A K + +V + DG + + + G + +G +AA +
Sbjct: 239 GGCQVPIAGYATLTKDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|323189475|gb|EFZ74755.1| porphobilinogen deaminase [Escherichia coli RN587/1]
Length = 286
Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats.
Identities = 100/272 (36%), Positives = 150/272 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276
>gi|325291200|ref|YP_004267381.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271]
gi|324966601|gb|ADY57380.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271]
Length = 305
Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats.
Identities = 121/304 (39%), Positives = 175/304 (57%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LA+ A + SL ++ P + V++P TKGD+I + L +IG KG
Sbjct: 1 MKTIRIGTRESKLAIWQAEWVKDSLTSIY--PGIDCVLVPKKTKGDKIPDIPLPKIGDKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FTEE+E+ L++GEID AVHS KD+P +L +GL I+AY R D RDVF L +L
Sbjct: 59 FFTEELEQALLTGEIDLAVHSLKDLPVELPQGLSIAAYGERHDPRDVFFGKEGLPLAELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-ILLAYAGIKRLKK 181
S+IGTSSLRR+ L R+D++ D RG ++TR +KL N++ A I+LA AG RL
Sbjct: 119 AGSMIGTSSLRRQCQLKYQRADLNFCDLRGNLDTRWDKLQNSRDMAGIVLAAAGALRLGW 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I E L + P+ GQG I IET + + +++++ +NH + + ER+FL L
Sbjct: 179 QDRITEFLAEDVVLPAVGQGIIAIETASHRTEIRQILQPLNHRPSELAGRAERSFLRSLG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C++ IA A + + G+V DGK +V+ G D G DAA I+ +
Sbjct: 239 GGCQTPIAALAKVQEDRIQVTGMVAGMDGKNILKVTAEGF--DPEQTGADAAAQIKCLGA 296
Query: 302 KNVF 305
N+
Sbjct: 297 NNLL 300
>gi|295706769|ref|YP_003599844.1| porphobilinogen deaminase [Bacillus megaterium DSM 319]
gi|294804428|gb|ADF41494.1| porphobilinogen deaminase [Bacillus megaterium DSM 319]
Length = 310
Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 166/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L P I + TKGD+I N TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L
Sbjct: 59 LFVKEIEQAMLDEEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+
Sbjct: 119 SGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNKDYDAIILAAAGLSRMGWS 178
Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++
Sbjct: 179 RDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEME 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+ G + +V + DGK ++ G D + IG AA+ +
Sbjct: 239 GGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEQITGK--DPVAIGSAAAERLTSQG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 AKLLID 302
>gi|332089030|gb|EGI94141.1| porphobilinogen deaminase [Shigella boydii 3594-74]
Length = 287
Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats.
Identities = 99/272 (36%), Positives = 149/272 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 277
>gi|13277999|gb|AAH03861.1| Hydroxymethylbilane synthase [Mus musculus]
Length = 361
Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352
>gi|237752686|ref|ZP_04583166.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430]
gi|229376175|gb|EEO26266.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430]
Length = 310
Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 11/312 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IGTR S LAL A ++ L + + P + + + TKGD+I + L +IGGKG
Sbjct: 1 MQKLTIGTRGSVLALWQANHIKNLLEERY--PKLEVELKIVKTKGDKILDVPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E L+ G+ID AVHS KD+P + +GL ++A RED+RD F+S ++L DL
Sbjct: 59 LFTKELEVLLLEGDIDLAVHSLKDVPVEFTQGLGLAAITKREDVRDSFLSFKYKNLGDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRR + R D+ RG ++TRL +L N + AI+LA AG+ RL+ +
Sbjct: 119 KGAKVGTTSLRRVMQINALRGDLDCQSLRGNVQTRLQRLENEEFDAIILAQAGVNRLELK 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I ++ P+ GQ A+ IE + EL+ +N ++ +CERAF+ L+G
Sbjct: 179 GIPY-ITPLDFMVPAMGQAALGIECK-KDSNYVELLSFLNDKNAVFETHCERAFVRVLNG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFI 299
C+ I A +L I+ DG + S + D IG+ A+
Sbjct: 237 GCQVPIGINARYNEGSLEVRAILGLPDGSEIIKENLESEVSSIKDCEYIGKTLAESFLNQ 296
Query: 300 SNKNVF----NF 307
+ + ++
Sbjct: 297 GAREILQKAQDW 308
>gi|74181545|dbj|BAE30038.1| unnamed protein product [Mus musculus]
Length = 360
Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 34/337 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQEDGPEDDPQL 314
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 VGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 351
>gi|254463278|ref|ZP_05076694.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2083]
gi|206679867|gb|EDZ44354.1| porphobilinogen deaminase [Rhodobacteraceae bacterium HTCC2083]
Length = 295
Score = 238 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 128/293 (43%), Positives = 173/293 (59%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA A+ETR L +P VI + T GD+I +R L EIGGKGLFT EIE ++S
Sbjct: 1 MALAQAYETRRRLSGAFDLPEEAFVIKVIKTTGDKILDRPLKEIGGKGLFTREIEDDMLS 60
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
G ID AVHS KDMP +GL + YLPRED+RD F+S + L DL +V+GTSSLRR
Sbjct: 61 GAIDIAVHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSSGHERLADLPSGAVVGTSSLRR 120
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
+A LL +R D++V++FRG ++TRL KL + A LA AG++RL V K + E+
Sbjct: 121 RAQLLNYRPDLNVVEFRGNVQTRLKKLEDKVADCTFLAMAGLRRLDMAHVAKSAIETEEM 180
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+ QGAI IE +N+ A E++ I+ T + ERAFLA LDGSC++ IAG A
Sbjct: 181 LPAVAQGAIGIERRINDTNAAEMLAAIHDTQTGQRLAAERAFLAALDGSCETPIAGLAEL 240
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307
GS + F G VL DG +G D + +G A + + + F +
Sbjct: 241 DGSNMRFRGQVLRPDGSESIGDDVSGTIEDGVAMGEAMAAKLLAEAGEGFFEW 293
>gi|329119508|ref|ZP_08248193.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464441|gb|EGF10741.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 317
Score = 238 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 165/302 (54%), Gaps = 2/302 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A ++ L ++ P +I I+ L+T+GD+I +RTL++IGGKGLF
Sbjct: 6 KLTIASRQSALAMWQAEHIKARLHALY--PACDIRILGLTTRGDQILDRTLSKIGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ +L L
Sbjct: 64 IKELEQALHDGRADLAVHSIKDVPMELPEGFLLAAIGERASPFDAFVSNRHNTLAALPAG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A + ++V RG ++TRL KL+N + AI+LA AG++RL
Sbjct: 124 AVVGTSSLRREAQIRARHPHLTVKPLRGNVQTRLAKLDNGEYDAIILAAAGLQRLGLNGR 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+EIL+ ++ P+ GQGA+ IE + L+ +NH +T V ER L GSC
Sbjct: 184 IREILSPDECLPAAGQGALGIEIAEHRSDLLPLLAPLNHAETAACVTAERTLAQALGGSC 243
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + L G+V DG + E + A +GR A+ + + +
Sbjct: 244 QIPLAAYCTSDEGLLTLRGLVGHPDGSVLIEAAAQAPAAYARTLGRAVAKRLADQDAEAL 303
Query: 305 FN 306
+
Sbjct: 304 ID 305
>gi|320101752|ref|YP_004177343.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644]
gi|319749034|gb|ADV60794.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644]
Length = 332
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 3/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIGTR SPLA A + L D P + ++ + T GDR N L IGG
Sbjct: 15 SHRRVRIGTRGSPLARWQAEWVAARLRDA--WPGLTVELVEIKTLGDRDRNSPLASIGGA 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+EI++ L+ ++ AVHS KD+PT+ ++GL + A PRE+ RD I+ L+ L
Sbjct: 73 GLFTKEIQRALLDCRVEIAVHSLKDLPTQPVEGLILGAVPPREEPRDALIAPAHGLLEHL 132
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT SLRR+A LL R D+ V+ RG +ETRLN + A+LLA AG++RL
Sbjct: 133 PAAARVGTGSLRRRAQLLWMRPDLEVVGVRGNVETRLNHALEGRLDAVLLAVAGLRRLGL 192
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + L DF P+ GQGA+ IE ++P L+ ++ + SV ERA LA+L+
Sbjct: 193 DSAITQTLGPPDFLPAVGQGALGIECRGDDPDTLALLAPLDDPASRASVLAERALLADLE 252
Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + + + L VL G+ +G D +G A +R
Sbjct: 253 AGCMVPLGAWGRSEADGLLALDAAVLDPAGRQRLAAHASGPANDPQTLGLAVAAELRRQG 312
Query: 301 NKNVF 305
+ +
Sbjct: 313 AEALL 317
>gi|110598700|ref|ZP_01386964.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031]
gi|110339694|gb|EAT58205.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031]
Length = 313
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 116/308 (37%), Positives = 166/308 (53%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG
Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKTELSR--HFPELDIKLKLVKTTGDVLLDSPLSKIGDM 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS LK+L
Sbjct: 59 GLFTKDIEKHLIAKEIDLAVHSLKDVPTGTPEGLIITSFTEREDTRDVIISKGGVKLKEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ + TSSLRR + LL R D+ + D RG + TR K + + A++LAYAG+ RL
Sbjct: 119 PANAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDAGEFDAMMLAYAGVYRLNF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L
Sbjct: 179 SDRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQ 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297
G C+ I + + TL V + DGK+ + A G A+ +
Sbjct: 239 GGCQIPIGAYGSFQNGTLKLLAYVGSVDGKVGLHDEITKTGLTSPEQAEEAGIALAEKLL 298
Query: 298 FISNKNVF 305
+
Sbjct: 299 AQGADAIL 306
>gi|328949818|ref|YP_004367153.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884]
gi|328450142|gb|AEB11043.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884]
Length = 305
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 9/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +GTR S LAL L + + P I + T+GDR +
Sbjct: 1 MRVIVVGTRGSALALTQTRWVVERLKE--QWPEAEFKIKTIQTRGDRG-----APPTDRD 53
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDL 121
+F +E+E+ L+ GEID AVHS KD+PT+ +GL I++ R D RDVFI + + L+DL
Sbjct: 54 IFVKELEEALLRGEIDIAVHSLKDLPTEQPEGLVIASIPKRVDPRDVFIGRNGIRRLEDL 113
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSS+RRKA LL +R D+ V + RG ++TRL+ L + + I+LA AG+ RL
Sbjct: 114 PEGAVVGTSSVRRKAQLLAYRPDLVVRELRGNVDTRLSALGSGEFDGIILAAAGLLRLDL 173
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I ++ + P+PGQGA+ +E + A EL I+H T D ER+FL L
Sbjct: 174 RNRIDAFIDPKIMLPAPGQGALALEVREGDDIADELAYSIHHHPTDDRTTAERSFLHHLG 233
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + + A+ + TL G+V+A DG G+ +A +G + A+ I
Sbjct: 234 AGCLAPVGALAHVEEDGTLRLEGVVVAPDGSSMIHGEIEGDAEEAWELGAELARDILEQG 293
Query: 301 NKNVFN 306
K +
Sbjct: 294 GKRILE 299
>gi|109108912|ref|XP_001101850.1| PREDICTED: porphobilinogen deaminase isoform 7 [Macaca mulatta]
Length = 361
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352
>gi|71064670|ref|YP_263397.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4]
gi|71037655|gb|AAZ17963.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4]
Length = 345
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 104/330 (31%), Positives = 169/330 (51%), Gaps = 31/330 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR SPLAL A R L+ ++ P I ++ + TKGD+I + L +IGGKGLF
Sbjct: 11 TLNIATRQSPLALWQAEHIRDRLLVLY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L
Sbjct: 69 VKELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIDELPQG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT+SLRR+ + +R+D+ + RG + TRL+KL+ + AI+LA +G++RL+
Sbjct: 129 AVVGTASLRRQCQIKAYRADLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLQRLELNAR 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L+I+ P+ GQGA+ IE ++ + +L+ +N + + ERA L G C
Sbjct: 189 IRSELDIDICLPAVGQGALAIECRADDDEVLKLLAPLNDDKARIRLIAERALNRHLQGGC 248
Query: 245 KSAIAGFAYCK---------------------GSTLYFYGIVLASDGKIFHEVSR----N 279
+ IA +A + G TL+ G V DG +V +
Sbjct: 249 QVPIAAYAVLQKADALAADNDDNGSVSNNNDAGDTLWLRGRVGQEDGSELLKVEKRQTLT 308
Query: 280 GNRCD----AINIGRDAAQYIRFISNKNVF 305
G++ + A +G + A+ + +
Sbjct: 309 GSQAEQEAQANQLGIEVAEMLLEAGAGAIL 338
>gi|161617053|ref|YP_001591018.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161366417|gb|ABX70185.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 286
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 98/272 (36%), Positives = 145/272 (53%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
Q L+ +NH T V ERA L+G C+ I +A ++ +V A DG +
Sbjct: 185 TQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVM 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G+ A +G A+ + + +
Sbjct: 245 VRGERRGSPEQAEQMGISLAEELLENGARAIL 276
>gi|297568516|ref|YP_003689860.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2]
gi|296924431|gb|ADH85241.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2]
Length = 311
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 170/303 (56%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LALA + + + + P ++ ++ + TKGD+I + L ++GGKGL
Sbjct: 3 KTIRIGTRASMLALAQSNWIKGRIEAQY--PGCSVELVKIVTKGDKIVDVPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ E+D AVHS KD+P +L +GL I RE D FI++ ++L ++
Sbjct: 61 FVKEIEEALLRREVDIAVHSMKDVPAELPEGLHIGIITEREKPFDAFITNNYKTLAEVPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRRKA L R R D+ + D RG ++TRL KL+ AI+LA AG+ RL
Sbjct: 121 GATIGTSSLRRKAQLARLRPDLKIEDLRGNLDTRLRKLDEGVYDAIILAAAGLNRLDLFH 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ P+ QGA+ IE + +++ ++H +T +V+ ER++L L+G
Sbjct: 181 RATFCFQPDEMLPAVAQGAVGIELRRADEDLLQMLSFMDHRETTLAVHAERSYLKRLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ +AGFA G TL G++ + DG + +G A +G + A+ + + +
Sbjct: 241 CQVPLAGFATLAGQTLTINGLIASVDGGKMVKAKHSGPAAQAKTLGLELAEELLAMGGRE 300
Query: 304 VFN 306
+
Sbjct: 301 ILE 303
>gi|229062158|ref|ZP_04199482.1| Porphobilinogen deaminase [Bacillus cereus AH603]
gi|228717141|gb|EEL68817.1| Porphobilinogen deaminase [Bacillus cereus AH603]
Length = 309
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDITLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLKENDEIELTALVGSMDGSVLLKEIVVG--NDPKQVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|154251802|ref|YP_001412626.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1]
gi|154155752|gb|ABS62969.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1]
Length = 308
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 131/307 (42%), Positives = 183/307 (59%), Gaps = 2/307 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI-VIIPLSTKGDRITNRTLTEIG 59
M+++ +RIGTR S LAL A E + P + I+ +ST GDR+ +R L+EIG
Sbjct: 1 MQRR-YRIGTRGSRLALIQANEVARRIALALHAPVEEVTEIVVISTAGDRVQDRALSEIG 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFTEEIE++L ID AVHS KDMPT L +GL I L R D RD F+S A SL
Sbjct: 60 GKGLFTEEIEEQLADARIDVAVHSMKDMPTLLPEGLVIDCLLERADPRDAFLSSKANSLM 119
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L +V+GTSSLRR A + R D++V+ FRG ++TRL KL + A A LLA AG+ R+
Sbjct: 120 SLPQGAVVGTSSLRRAAQVRARRPDVTVVPFRGNVDTRLKKLADGVADATLLAMAGLTRM 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L+ E+ P+ QGAI IE + +A L++ ++H +T V ERAFLA
Sbjct: 180 DLLECVTAPLSPEELLPAVAQGAIGIERRAADDEAAHLLEKLHHTETGLRVAAERAFLAV 239
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
LDGSC++ IA A G + ++L DG HE R G DA+ +G+DA + ++
Sbjct: 240 LDGSCRTPIAALAEISGDHMRLRTMILTPDGAEIHETEREGLAADAVLLGQDAGEELKGR 299
Query: 300 SNKNVFN 306
+ + F+
Sbjct: 300 AGPHFFD 306
>gi|159110431|ref|NP_038579.2| porphobilinogen deaminase isoform 1 [Mus musculus]
gi|74177773|dbj|BAE38979.1| unnamed protein product [Mus musculus]
gi|74198532|dbj|BAE39746.1| unnamed protein product [Mus musculus]
Length = 361
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352
>gi|208435725|pdb|3ECR|A Chain A, Structure Of Human Porphobilinogen Deaminase
gi|208435726|pdb|3ECR|B Chain B, Structure Of Human Porphobilinogen Deaminase
Length = 364
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 107/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 20 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 77
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 78 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 137
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 138 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 197
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 198 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 257
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 258 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 317
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 318 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 355
>gi|323173419|gb|EFZ59048.1| porphobilinogen deaminase [Escherichia coli LT-68]
Length = 286
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 98/272 (36%), Positives = 149/272 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G +A +G A+ + + +
Sbjct: 245 IRGERRGAPQNAEQMGISLAEELLNNGAREIL 276
>gi|20149500|ref|NP_000181.2| porphobilinogen deaminase isoform 1 [Homo sapiens]
gi|1170217|sp|P08397|HEM3_HUMAN RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|12653497|gb|AAH00520.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|14198180|gb|AAH08149.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|17939638|gb|AAH19323.1| Hydroxymethylbilane synthase [Homo sapiens]
gi|119587851|gb|EAW67447.1| hydroxymethylbilane synthase, isoform CRA_a [Homo sapiens]
gi|158261573|dbj|BAF82964.1| unnamed protein product [Homo sapiens]
gi|312152370|gb|ADQ32697.1| hydroxymethylbilane synthase [synthetic construct]
Length = 361
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 107/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352
>gi|29655352|ref|NP_821044.1| porphobilinogen deaminase [Coxiella burnetii RSA 493]
gi|212213517|ref|YP_002304453.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212]
gi|39931503|sp|Q83A37|HEM3_COXBU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706284|sp|B6J3T6|HEM3_COXB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|29542624|gb|AAO91558.1| porphobilinogen deaminase [Coxiella burnetii RSA 493]
gi|212011927|gb|ACJ19308.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212]
Length = 307
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 159/304 (52%), Gaps = 4/304 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK
Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LF ++++K L++ + D AVHS KDM L + A++ RED RDV I S
Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKGELSTL-- 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L
Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + IA A K L + ++ DG++ + GN +A IG A +
Sbjct: 239 GDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQLLEQGG 298
Query: 302 KNVF 305
++
Sbjct: 299 DSLL 302
>gi|94984201|ref|YP_603565.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300]
gi|123257361|sp|Q1J288|HEM3_DEIGD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94554482|gb|ABF44396.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300]
Length = 309
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGG 60
+ +GTR S LALA + L + + P + I +STKGDR ++L + G
Sbjct: 1 MRTVTVGTRGSALALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRDRAALQSLAQKGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119
KG + +EIE L++G ID AVHS KD+PT+ +GL+I++ R D RDV I + L+
Sbjct: 59 KGFWVKEIEDALLAGRIDIAVHSLKDLPTEQPEGLEIASIPKRVDARDVLIGKDGMKRLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + +GTSS+RRKA L +R D+ ++D RG I+TRL L AI+LA AG+ R
Sbjct: 119 DLPSGARVGTSSVRRKAFLRAYRPDLQILDLRGNIDTRLAALGTPDYDAIVLAAAGLIRT 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I E ++ + P+PGQGA+ +ET ++ + E+V I+ T D V ER FLA
Sbjct: 179 EMRHRIDEFIDPDLLLPAPGQGALALETRADDDLSIEVVYAIHDHATDDRVTAEREFLAG 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L C + + A K L G V A DG + +G+ + ++G + A +
Sbjct: 239 LGAGCMAPVGAHATLKDGVLTLEGWVGALDGSQVIRATTSGDPAECADLGAELAADMLGQ 298
Query: 300 SNKNVFN 306
+ +
Sbjct: 299 GAQQLIE 305
>gi|291298238|ref|YP_003509516.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728]
gi|290567458|gb|ADD40423.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728]
Length = 307
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 106/309 (34%), Positives = 162/309 (52%), Gaps = 9/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR SP+ALA A ++L + P + I+P +T GD+ L+++GG
Sbjct: 1 MSVK-VRIGTRSSPMALAQADRVSAALTAL--DPDVAVEIVPFTTSGDKWMG-PLSQLGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG FT+E++ L+ G D VH KD+P L +G I+A+L R+D+RD + SL
Sbjct: 57 KGAFTKEVDAALVEGTCDLCVHCVKDIPGDRDLPEGTVIAAHLERDDVRDALVHPGGLSL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL S IGTSS RR A L +S + RG TRL KL+ A+LLA +G++R
Sbjct: 117 SDLPDGSRIGTSSPRRAAQLALHWPRLSPLPIRGNANTRLAKLDAGDFDALLLAVSGLER 176
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L I EIL+++ P+ G G + ++ ++ ++LV ++ T ER+ L
Sbjct: 177 LALTDRITEILDVDTMVPAIGSGTLALQCRTDDTPVRDLVARLDDPMTSWRTEAERSMLR 236
Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C S IAG+A + L +G V++ DG E +G DA +G A+ +
Sbjct: 237 ALNGHCHSPIAGYAIQESEGVLSLHGRVMSLDGSTVLEARESG--ADATALGTSVAEALL 294
Query: 298 FISNKNVFN 306
+ + +
Sbjct: 295 RQGARELID 303
>gi|34101365|gb|AAQ57734.1| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472]
Length = 295
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 2/289 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF +E+E+ L+ G
Sbjct: 1 MWQAEHIQARLQALY--PHLTVEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALMDGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L G ++A RED RD F+S+ Q L +L SV+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L ++V RG ++TRL KL++ + AI+LA AG+KRL + I+ L + P
Sbjct: 119 QLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELAPSESLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + L+ +NH DT ERA EL GSC+ + FA
Sbjct: 179 AAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSCQVPLGAFATLAD 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
TL G+V DG + S +G A +GR A+ + + +
Sbjct: 239 GTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGARPLI 287
>gi|109108922|ref|XP_001101575.1| PREDICTED: porphobilinogen deaminase isoform 4 [Macaca mulatta]
gi|109108924|ref|XP_001101668.1| PREDICTED: porphobilinogen deaminase isoform 5 [Macaca mulatta]
Length = 344
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 108/337 (32%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 335
>gi|159110463|ref|NP_001103721.1| porphobilinogen deaminase isoform 2 [Mus musculus]
gi|74138074|dbj|BAE25434.1| unnamed protein product [Mus musculus]
Length = 344
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 335
>gi|153206963|ref|ZP_01945781.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177']
gi|154707682|ref|YP_001425472.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111]
gi|165918283|ref|ZP_02218369.1| porphobilinogen deaminase [Coxiella burnetii RSA 334]
gi|212219568|ref|YP_002306355.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154]
gi|189028088|sp|A9KDC4|HEM3_COXBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706283|sp|B6J6K0|HEM3_COXB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120577036|gb|EAX33660.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177']
gi|154356968|gb|ABS78430.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111]
gi|165918143|gb|EDR36747.1| porphobilinogen deaminase [Coxiella burnetii RSA 334]
gi|212013830|gb|ACJ21210.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154]
Length = 307
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 159/304 (52%), Gaps = 4/304 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK
Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LF ++++K L++ + D AVHS KDM L + A++ RED RDV I S
Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKGELSTL-- 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L
Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + IA A K L + ++ DG++ + GN +A IG A +
Sbjct: 239 GDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAQRIGFKVASQLLEQGG 298
Query: 302 KNVF 305
++
Sbjct: 299 DSLL 302
>gi|229169206|ref|ZP_04296920.1| Porphobilinogen deaminase [Bacillus cereus AH621]
gi|228614272|gb|EEK71383.1| Porphobilinogen deaminase [Bacillus cereus AH621]
Length = 309
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLMIGCTPKRVDPRDAFISKNGESFKDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVG--NDPKQVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|163797975|ref|ZP_02191917.1| Porphobilinogen deaminase [alpha proteobacterium BAL199]
gi|159176769|gb|EDP61340.1| Porphobilinogen deaminase [alpha proteobacterium BAL199]
Length = 321
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 5/305 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R SPLAL E R L I + + T GD + +R L EIGGKGLF
Sbjct: 15 LTLGSRGSPLALRQTHEVRDRLAAAWPELAGAIAVQEIRTTGDAVRDRPLAEIGGKGLFI 74
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++G+ID AVHS KDM T + + A LPRED RD ++S A + DL +
Sbjct: 75 KEIEQALMAGQIDAAVHSMKDMETTIAPASVLVAVLPREDPRDAWLSPIADRVDDLPSGA 134
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT+S+RR A +L R D+ V+ FRG ++TRL KL + LA AG+ RL
Sbjct: 135 KIGTASVRRAAQVLNRRPDLQVVLFRGNVDTRLRKLAEGEVAGTFLAAAGLSRLGMLDKA 194
Query: 186 KEILNIEDFPPSPGQGAICIETHV-----NNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
IL +++ P+ QGAI ++ + + + + +++ + V ERA LA L
Sbjct: 195 TRILEVDEMLPAVSQGAIGVQCRDGEASARDAEIRNWLSILDDRPSRLRVTAERAMLATL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSC++ IAG A G+ L G+V + DG+ H D +GR + I
Sbjct: 255 DGSCRTPIAGHATLGGARLTLSGMVFSLDGQSSHGAVDTSATDDPEALGRTVGEAILARG 314
Query: 301 NKNVF 305
+N
Sbjct: 315 GRNFL 319
>gi|300312229|ref|YP_003776321.1| porphobilinogen deaminase [Herbaspirillum seropedicae SmR1]
gi|300075014|gb|ADJ64413.1| porphobilinogen deaminase protein [Herbaspirillum seropedicae SmR1]
Length = 318
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R L ++ P +I I+ +T+GD+I +R L+++GGKGLF
Sbjct: 9 IVIVSRESRLAMWQAEYVRDRLAALY--PQCSISILGTTTRGDQILDRALSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + G D AVH KDMP L +G +++A L RED RD F+S+ +L +L +
Sbjct: 67 KELEVAMAEGRADLAVHCLKDMPMDLPEGFELAAILEREDPRDAFVSNDYAALDELPDGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A++ + V RG ++TRL KL+ AI+LA AG+ RL + I
Sbjct: 127 VVGTSSLRRQAMIAARYPQLVVKPLRGNLDTRLAKLDRGDYAAIILAVAGLNRLGLKARI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ PSPGQG + IE + L+ ++ E ER+ SC+
Sbjct: 187 RSFLDPAQSLPSPGQGTLAIEIPEGREDIKRLLAPLHDEPAAVVSAAERSVSRIFGASCQ 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A G L+ ++ DG G +G A+ ++ ++
Sbjct: 247 IPLAAYATLDGQRLHLRAMIATPDGLHAAAAEAEGPAAAPEALGAQVAELLKARGADDIL 306
>gi|320335860|ref|YP_004172571.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211]
gi|319757149|gb|ADV68906.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211]
Length = 313
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGGK 61
+ +GTR S LALA + L + + P I +STKGDR + TL + G K
Sbjct: 6 RSITVGTRGSALALAQTRWVVARLKE--EWPDTEFRIQTISTKGDRDRSSLETLAQKGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKD 120
G + +EIE L+S ID AVHS KD+PT +GL+IS+ R + RD I + L D
Sbjct: 64 GFWVKEIEDALLSSRIDIAVHSLKDLPTAQPEGLEISSIPKRVEARDALIGKEGMKRLVD 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRKA L +R D+ V D RG ++TRL L N+ AI+LA AG+ RL+
Sbjct: 124 LPQGARIGTSSVRRKAFLRAFRPDLDVKDLRGNVDTRLAALAGNEYDAIILAAAGLTRLE 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+++ + P+PGQGA+ +ET ++ A E+ I+ T D ER FLA L
Sbjct: 184 MRNRIDELVDPDILLPAPGQGALALETRSDDDLAVEVAYAIHDRATDDRTTAEREFLAGL 243
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + + A KG L G V A DG + G+ + ++G A+ +
Sbjct: 244 GAGCMAPVGALATLKGGVLTLEGWVGALDGTQVIRATIEGDADECADLGAQLAEDMLAQG 303
Query: 301 NKNVFN 306
+ + +
Sbjct: 304 AQALID 309
>gi|229013679|ref|ZP_04170808.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048]
gi|229135309|ref|ZP_04264103.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196]
gi|228648132|gb|EEL04173.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196]
gi|228747601|gb|EEL97475.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048]
Length = 309
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVG--NDPKQVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|224419071|ref|ZP_03657077.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|253828009|ref|ZP_04870894.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|313142581|ref|ZP_07804774.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|253511415|gb|EES90074.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|313131612|gb|EFR49229.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
Length = 314
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IGTR S LAL A + SL + P + + + TKGD+I + L +IGGKG
Sbjct: 1 MQKIIIGTRGSVLALWQANFVKDSLEKQY--PNLQVELKIVKTKGDKILDVPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ GEID AVHS KD+P + ++GL ++A RED+RD F+S ++L++L
Sbjct: 59 LFTKELEELMLKGEIDVAVHSLKDVPVEFVEGLGLAAITKREDVRDSFLSFKYKNLQELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRR + R D+ + RG ++TRL +L AI+LA AG+ RL E
Sbjct: 119 QGAKVGTTSLRRVMQINTLRKDLDCMSLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIE 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I ++ P+ GQ A+ IE + + +L++ +N + ER F+ L+G
Sbjct: 179 GEVDCIAPLDFMIPAMGQAALGIECR-VDSEVAKLLEFLNDTKASFETSAEREFVKTLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFI 299
C+ I A + L I+ DG + + D GRD A
Sbjct: 238 GCQVPIGINATLEKDNLTIRAILGIPDGSRILKDAKVCAVSSLEDCKKAGRDFALEFIKK 297
Query: 300 SNKNVF 305
K +
Sbjct: 298 GAKEIL 303
>gi|309784521|ref|ZP_07679159.1| porphobilinogen deaminase [Shigella dysenteriae 1617]
gi|308927627|gb|EFP73096.1| porphobilinogen deaminase [Shigella dysenteriae 1617]
Length = 286
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 99/272 (36%), Positives = 149/272 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLVALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276
>gi|66933009|ref|NP_001019553.1| porphobilinogen deaminase isoform 2 [Homo sapiens]
Length = 344
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 335
>gi|292386|gb|AAA60029.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 361
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352
>gi|257092424|ref|YP_003166065.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044948|gb|ACV34136.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 315
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 152/300 (50%), Gaps = 2/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A L +++ P + I+ ++T+GD+I +R L IGGKGLF
Sbjct: 11 LVIASRESRLAMWQAQHVSGRLTELY--PQTAVDILGMTTRGDQILDRPLAAIGGKGLFI 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + G D AVHS KD+P ++ +G ++A RE+ D F+S+ L +L ++
Sbjct: 69 KELEVAMQQGRADLAVHSMKDLPMEMPEGFALAAISVRENPCDAFVSNRFGGLAELPANA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A+L + + RG ++TRL KL+ AI+LA AG+ RL I
Sbjct: 129 VVGTSSLRREAMLRAGYPQLEIRSLRGNLDTRLRKLDAGDYDAIILAAAGLIRLGLTDRI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K +L E P+PGQG + IE LV +N T V ERAF L GSC+
Sbjct: 189 KAVLTPEQSLPAPGQGVLGIEVLSARVDLLTLVAPLNDVATAHCVRAERAFSRALGGSCQ 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A A L+ G + DG+ G D +IG AQ + +
Sbjct: 249 IPLAAHAVLDSGALWLRGWIATPDGRHSLSGELRGLPEDDESIGCRLAQALHERGADAIL 308
>gi|301788448|ref|XP_002929638.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Ailuropoda
melanoleuca]
Length = 361
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L + P I+ +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIRVTAQLEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPREAQLAAENLGISLASLLLNKGAKNILD 352
>gi|325266571|ref|ZP_08133248.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394]
gi|324982014|gb|EGC17649.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394]
Length = 313
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 158/303 (52%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGL
Sbjct: 5 QKLTIASRESALAMWQAEHIQAKLQALY--PSCTVDILGMTTQGDQILDKTLSKIGGKGL 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L D AVHS KD+P L +G + A R + D +S+ + L++L
Sbjct: 63 FIKELETALQENRADLAVHSLKDVPMDLPEGFVLVAVGERANPFDALVSNRFERLEELPE 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A L + V RG ++TRL KL+N AI+LA AG++RL+
Sbjct: 123 GAVVGTSSLRREAQLRARFPHLQVKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLQLHG 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS
Sbjct: 183 RIRNLLPPSDSLPAAGQGALGIEIAAHRTDLVDILLPLNHAQTAACVTAERALARALGGS 242
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ + + L +G+V DG + + A +GR A+ + +
Sbjct: 243 CQVPLGAYCTADEYGLLTLHGLVAHPDGSVVMTANAQAPAPYADALGRAVAKKLSDDGAR 302
Query: 303 NVF 305
V
Sbjct: 303 EVI 305
>gi|35309|emb|CAA28499.1| unnamed protein product [Homo sapiens]
Length = 361
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 107/338 (31%), Positives = 157/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWHNRVGQILHPEKCMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352
>gi|299822782|ref|ZP_07054668.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601]
gi|299816311|gb|EFI83549.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601]
Length = 311
Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 112/308 (36%), Positives = 165/308 (53%), Gaps = 8/308 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ + +G+R S LAL + L + P + I + TKGD+I + TL+++GG
Sbjct: 1 MKSQ-IIVGSRRSKLALVQTNWVINELKKHY--PTIDFRIEEMVTKGDKILDVTLSKVGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF E+E+ L+ ID AVHS KD+P + +GL I+A RE DVF+ D
Sbjct: 58 KGLFVSEVEQALVDKHIDFAVHSMKDVPAVIEEGLTIAAIPERESANDVFVFKEVHDFGD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++IGTSSLRR + +L R D+ + RG I+TRL KL AI+LA AG+ R+
Sbjct: 118 LPTQAIIGTSSLRRASQILAERPDLQIKFIRGNIDTRLRKLREEDFDAIILAQAGLSRMG 177
Query: 181 K---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ + + + P+ GQGA+ IE + +++++ I+H T + V ERAFL
Sbjct: 178 WLEDDSLRIQTIPETICLPAVGQGALAIECREEDNDTKDILRSIHHAITANCVAAERAFL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C+ IAG+A GS + F G+V DGK E R G DA IG +AA +
Sbjct: 238 KTLNGGCEIPIAGYATQSGSKVSFKGLVGTPDGKTIWEAERVG--EDADQIGTEAANELL 295
Query: 298 FISNKNVF 305
+
Sbjct: 296 EKGAGALI 303
>gi|258645838|ref|ZP_05733307.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470]
gi|260403210|gb|EEW96757.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470]
Length = 307
Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K I TR S LAL A + + D + P + ++P++TKGD+I +R+L EIGGK
Sbjct: 1 MKDKIIIATRESLLALWQAEHVKKRIEDTY--PEIQVELLPVTTKGDQILDRSLLEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+EK L+ + D AVHS KDM + GL+++A RED RD F+S SL++L
Sbjct: 59 GLFIKELEKLLLEKKADIAVHSLKDMTAVIPDGLKLAAVTAREDPRDAFVSLEYGSLQEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSSLRR+A LL D+ + RG ++TRL L+ A++LA AG+KRL
Sbjct: 119 PEGAVVGTSSLRRQAQLLHLWPDLQIKTLRGNVQTRLRHLDEGNYDAVILAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ I+ ++ D P+ GQG + IET + + + E+++ I+ E + ERAFL ++
Sbjct: 179 QERIQSYISTCDSIPAAGQGVMAIETRIGDDETMEIIQFIHDEKVASCIMAERAFLEKVG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G CK +A + + + DGK ++ S NG DA +G A+ +
Sbjct: 239 GDCKVPAGIYAVPFLGHIEAVAFIGSPDGKEMYKRSLNGQTQDAKQLGESLAEALIADGG 298
Query: 302 KNVFN 306
+
Sbjct: 299 GRILE 303
>gi|297690413|ref|XP_002822613.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Pongo abelii]
Length = 361
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 107/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWHNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMHATIHVPAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352
>gi|71892349|ref|YP_278083.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123747812|sp|Q491Z6|HEM3_BLOPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71796455|gb|AAZ41206.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 300
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K +I TR S LA+ A + L H P +I ++P+ T GD+ N
Sbjct: 1 MKNKILKIATRKSQLAICQAQYVHNELK--HYHPTLSIELMPIVTTGDKFLNIDAKNKIK 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG F +E+E LI+ D AVHS KD+ L L + R D RD F+S ++
Sbjct: 59 KGAFIKELEHALINFRADIAVHSMKDITVPLPDELTLPVLCKRNDPRDAFVSLKYPNIDT 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + SVIGTSSLRR+ + R D+ V + RG I+TRL KL + AI+LA AG++RL+
Sbjct: 119 LPIGSVIGTSSLRRQCQIRAHRPDLVVSNLRGNIDTRLKKLQYGQYDAIVLAVAGLQRLQ 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ ++ D P+ GQG I IE N+ L+ + H++T V ERA L
Sbjct: 179 LHEYIRVHIDPSDLLPAMGQGVIAIECRSNDADILSLLSPLYHQETSFRVRAERAVTTYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ C IA +A + ++ ++ DG A +G A+ +
Sbjct: 239 ESYCHLPIASYAEIEEDQIWLRALIGLPDGSKIIRTEGRAPLDQAEKLGFILAEDLL 295
>gi|292385|gb|AAA60030.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 344
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R
Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 335
>gi|73955044|ref|XP_546491.2| PREDICTED: similar to Porphobilinogen deaminase
(Hydroxymethylbilane synthase) (HMBS)
(Pre-uroporphyrinogen synthase) (PBG-D) [Canis
familiaris]
Length = 361
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDELQEFSAIILAAAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIHITAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPREAQLAAENLGISLASLLLNKGAKNILD 352
>gi|212275007|ref|NP_001130048.1| hypothetical protein LOC100191140 [Zea mays]
gi|194688160|gb|ACF78164.1| unknown [Zea mays]
Length = 394
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 131/301 (43%), Positives = 180/301 (59%), Gaps = 5/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL
Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L
Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK +
Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+
Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300
C++ IA +AY F G++ + DG E +R+G D + +G+DA +R
Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELRRRL 347
Query: 301 N 301
Sbjct: 348 G 348
>gi|301788450|ref|XP_002929639.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Ailuropoda
melanoleuca]
Length = 344
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA + L + P I+ +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIRVTAQLEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPREAQLAAENLGISLASLLLNKGAKNILD 335
>gi|161831110|ref|YP_001595911.1| porphobilinogen deaminase [Coxiella burnetii RSA 331]
gi|189028089|sp|A9N910|HEM3_COXBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|161762977|gb|ABX78619.1| porphobilinogen deaminase [Coxiella burnetii RSA 331]
Length = 307
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 158/304 (51%), Gaps = 4/304 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK
Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LF ++++K L++ + D AVHS KDM L + A++ RED RDV I S
Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKGELSTL-- 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL
Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L
Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + IA A K + ++ DG++ + GN +A IG A +
Sbjct: 239 GDCFTPIAAHAIIKNDQFSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQLLEQGG 298
Query: 302 KNVF 305
++
Sbjct: 299 DSLL 302
>gi|295317399|ref|NP_001171279.1| porphobilinogen deaminase isoform 1a [Felis catus]
gi|289191079|gb|ADC93652.1| hydroxymethylbilane synthase housekeeping form 1a [Felis catus]
Length = 361
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATICVTAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRQAQLAAENLGISLASLLLNKGAKNILD 352
>gi|319892715|ref|YP_004149590.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162411|gb|ADV05954.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius
HKU10-03]
Length = 309
Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 175/305 (57%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKG
Sbjct: 1 MRKLIVGSRRSQLALTQSQQFIDRLKEV--DPTLDIEIKEIVTKGDQIVDRQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + +ID A+HS KD+P++L +GL + RE+ D FIS L +L
Sbjct: 59 LFVKEIQNELFNRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+
Sbjct: 119 DGSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++
Sbjct: 179 DDIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMN 238
Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A K T + F G++++ DGK E + +G D I +G + ++ ++
Sbjct: 239 GSCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSG--QDPIQVGSEVSRVLKSQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 ADKII 301
>gi|332750972|gb|EGJ81377.1| porphobilinogen deaminase [Shigella flexneri 4343-70]
gi|332751059|gb|EGJ81463.1| porphobilinogen deaminase [Shigella flexneri K-671]
Length = 286
Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats.
Identities = 99/272 (36%), Positives = 149/272 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 244
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G DA +G A+ + + +
Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276
>gi|224510663|pdb|3EQ1|A Chain A, The Crystal Structure Of Human Porphobilinogen Deaminase
At 2.8a Resolution
gi|224510664|pdb|3EQ1|B Chain B, The Crystal Structure Of Human Porphobilinogen Deaminase
At 2.8a Resolution
Length = 361
Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + +G + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352
>gi|315122376|ref|YP_004062865.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495778|gb|ADR52377.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 307
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 243/306 (79%), Positives = 276/306 (90%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME+K F+IGTR SPLALAHAFETRS LM VHKIP I ++PLSTKGDRITNRTLTEIGG
Sbjct: 1 MEEKDFKIGTRRSPLALAHAFETRSYLMSVHKIPLEKIFVVPLSTKGDRITNRTLTEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEEIE+KLISGEID AVHSAKDMPTKLLKGL+ISAYLPRED+RDVFISHTAQSL D
Sbjct: 61 KGLFTEEIERKLISGEIDFAVHSAKDMPTKLLKGLRISAYLPREDVRDVFISHTAQSLND 120
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
LA++S++GTSSLRRKALLLRWR+D+S+IDFRGKIETRL KL N +A A+LLAYAGIKRLK
Sbjct: 121 LAVNSIVGTSSLRRKALLLRWRADLSIIDFRGKIETRLTKLKNKQADAMLLAYAGIKRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KE V+KEILN+EDFPPSPGQGAICIETH+NN +A EL INH +TWD+V+CERAFLAEL
Sbjct: 181 KESVVKEILNLEDFPPSPGQGAICIETHMNNTRAHELATAINHRETWDTVSCERAFLAEL 240
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
DGSCKSAIAGF+YCKG +LYFYG +L DGKIFHEVS++GN CDAI IGRDA ++IR I+
Sbjct: 241 DGSCKSAIAGFSYCKGQSLYFYGTILTPDGKIFHEVSKSGNCCDAIQIGRDAGRHIRLIA 300
Query: 301 NKNVFN 306
+K +FN
Sbjct: 301 DKTIFN 306
>gi|315635705|ref|ZP_07890968.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22]
gi|315480002|gb|EFU70672.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22]
Length = 312
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 111/309 (35%), Positives = 162/309 (52%), Gaps = 8/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL + ++ L++ + P I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKARLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++
Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L
Sbjct: 117 LPKGAVVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
E +K + PS GQ + IET N+PK E++KV+N + ER+F+
Sbjct: 177 IENEVKYFSPISTDVMIPSMGQATLGIETT-NDPKVLEILKVLNDNNAHIESTIERSFVD 235
Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L G C+ I A +++ IV DG + + D IG++ AQ
Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFI 295
Query: 298 FISNKNVFN 306
K +
Sbjct: 296 DQGAKELLE 304
>gi|54295573|ref|YP_127988.1| porphobilinogen deaminase HemC [Legionella pneumophila str. Lens]
gi|61213284|sp|Q5WT65|HEM3_LEGPL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|53755405|emb|CAH16901.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Lens]
Length = 309
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPQFKSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ V RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQVKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIYGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + + L VL DG + + G +A I + +
Sbjct: 239 GGNCHIPFAVYCTITAENLLLLRAKVLNLDGSQMIDDEQQGKIEEAEIIADRCTESLMTK 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAMTLL 304
>gi|323464250|gb|ADX76403.1| porphobilinogen deaminase [Staphylococcus pseudintermedius ED99]
Length = 309
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 175/305 (57%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKG
Sbjct: 1 MRKLIVGSRRSQLALTQSQQFIDRLKEV--DPTLDIEIKEIVTKGDQIVDRQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L S +ID A+HS KD+P++L +GL + RE+ D FIS L +L
Sbjct: 59 LFVKEIQNELFSRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+
Sbjct: 119 DGSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++
Sbjct: 179 DDIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMN 238
Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A K T + F G++++ DGK E + +G D I +G + ++ ++
Sbjct: 239 GSCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSG--QDPIQVGSEVSRVLKSQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 ADKII 301
>gi|157736544|ref|YP_001489227.1| porphobilinogen deaminase [Arcobacter butzleri RM4018]
gi|167008810|sp|A8ERI4|HEM3_ARCB4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157698398|gb|ABV66558.1| porphobilinogen deaminase [Arcobacter butzleri RM4018]
Length = 312
Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats.
Identities = 111/309 (35%), Positives = 162/309 (52%), Gaps = 8/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL + +S L++ + P I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKSRLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++
Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L
Sbjct: 117 LPKGAIVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
E +K + PS GQ + IET N+PK E++KV+N + ER+F+
Sbjct: 177 IENEVKYFSPISTDIMIPSMGQATLGIETT-NDPKVLEILKVLNDNNAHIESTVERSFVD 235
Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L G C+ I A +++ IV DG + + D IG++ AQ
Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFI 295
Query: 298 FISNKNVFN 306
K +
Sbjct: 296 DQGAKELLE 304
>gi|297690415|ref|XP_002822614.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Pongo abelii]
gi|297690417|ref|XP_002822615.1| PREDICTED: porphobilinogen deaminase-like isoform 3 [Pongo abelii]
gi|297690419|ref|XP_002822616.1| PREDICTED: porphobilinogen deaminase-like isoform 4 [Pongo abelii]
Length = 344
Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 107/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWHNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMHATIHVPAQHEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 335
>gi|295317401|ref|NP_001171280.1| porphobilinogen deaminase isoform 2a [Felis catus]
gi|289191083|gb|ADC93654.1| hydroxymethylbilane synthase erythroid form 2a [Felis catus]
gi|289191085|gb|ADC93655.1| hydroxymethylbilane synthase erythroid form 2b [Felis catus]
Length = 344
Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATICVTAQHEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPRQAQLAAENLGISLASLLLNKGAKNILD 335
>gi|313893126|ref|ZP_07826703.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442479|gb|EFR60894.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 305
Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 104/278 (37%), Positives = 158/278 (56%), Gaps = 2/278 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT
Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L +
Sbjct: 63 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I
Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+
Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ L ++ + DGK +E +G
Sbjct: 243 VPMGVHGTIDKGQLTLKAMIASLDGKTVYEGEISGPAK 280
>gi|35307|emb|CAA27801.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 156/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + K + +
Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKTILD 335
>gi|186476930|ref|YP_001858400.1| porphobilinogen deaminase [Burkholderia phymatum STM815]
gi|238058733|sp|B2JEN9|HEM3_BURP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|184193389|gb|ACC71354.1| porphobilinogen deaminase [Burkholderia phymatum STM815]
Length = 327
Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G +S + RED RD F+S+ SL L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFVLSTIMEREDPRDAFVSNQYDSLAALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A+L ++ V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 131 SVVGTSSLRREAMLRARYPELVVKPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLGER 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ D P+ GQGA+ IE + ++HE T +V ER L GSC
Sbjct: 191 IRSLLDPADSLPAAGQGALGIEIRAGRDDLAAWLAPLHHEHTAAAVEAERMVSRTLGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+ +A +A L+ GIV DG+ + A+ +GR+ A +
Sbjct: 251 EVPLAAYATWHDGALHLRGIVATPDGERVLSAQASAPAATTDAALELGREVASQLEAQGA 310
Query: 302 KNV 304
++
Sbjct: 311 LDI 313
>gi|163942212|ref|YP_001647096.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4]
gi|229836104|sp|A9VIT8|HEM3_BACWK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|163864409|gb|ABY45468.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4]
Length = 309
Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P+ + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA
Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ +
Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+
Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG+A + + +V + DG + + G D +G +AA +
Sbjct: 239 GGCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVG--IDPKQVGLEAADRLIKQG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELI 301
>gi|145346959|ref|XP_001417948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578176|gb|ABO96241.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 325
Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 4/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+IGTR SPLALA A+ TR L + + I + T GD++ ++ L +IGGKGL
Sbjct: 12 VKIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKGL 71
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL L
Sbjct: 72 FTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLSQLPE 131
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ +
Sbjct: 132 GAVVGTASLRRQSQLLYKFPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLAQ 191
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
K I+ E+ P+ QGAI I + K + +NHEDT +V ER+FLA LDGS
Sbjct: 192 HAKVIIPTEEMLPAVAQGAIGITCRAGDDKQLAFLAKLNHEDTRMAVEGERSFLAALDGS 251
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI--GRDAAQYIRFISN 301
C++ IA + + F G++ + DGK E +R G A + G+DA ++ +
Sbjct: 252 CRTPIAAHCHLVDGKMQFRGLIASLDGKQVLETTREGAWDAASLLDAGKDAGAELKGKAP 311
Query: 302 KNVF 305
+ F
Sbjct: 312 ADFF 315
>gi|313680762|ref|YP_004058501.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977]
gi|313153477|gb|ADR37328.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977]
Length = 303
Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 150/304 (49%), Gaps = 8/304 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +GTR S LAL L + P I + TKGDR + +
Sbjct: 1 MRVIVVGTRGSLLALTQTRWAVERLKE--NWPETEFKIKTIQTKGDRGADPR-----EQN 53
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDL 121
+F E+E+ L GEID AVHS KD+PT +GL I+ R D RDVFI ++ + DL
Sbjct: 54 IFVGELEEALRRGEIDIAVHSLKDLPTTQPEGLVIAGVPRRVDPRDVFIGRNSVARMADL 113
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSS+RR+A LL WR D+ ++ RG +++RL +L + I+LA AG+ RL+
Sbjct: 114 PKGARIGTSSVRRRAQLLAWRDDLEIVPLRGNVDSRLKRLVSEDLDGIILAAAGLLRLEM 173
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I E ++ E P+PGQGA+ +E + A EL +NH T V ER FL L
Sbjct: 174 RNRIGEFVDPEILLPAPGQGALALEVREGDDMADELAYSLNHAPTRARVLAERGFLHGLG 233
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + A + L VL+ DGK G+ +A +G + A+ +
Sbjct: 234 AGCLAPVGALAQIEDDVLVLDAGVLSLDGKTLIRGEIEGDPEEAWELGLELARDVLEAGG 293
Query: 302 KNVF 305
+ V
Sbjct: 294 REVL 297
>gi|168034136|ref|XP_001769569.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679111|gb|EDQ65562.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 135/306 (44%), Positives = 186/306 (60%), Gaps = 4/306 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGL
Sbjct: 56 VRIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALDIVIIKTTGDKILSQPLADIGGKGL 115
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L
Sbjct: 116 FTKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPKYSSLAELPE 175
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
SV+G++SLRR++ LL + V++FRG ++TRL KLN A LLA AG+KRL +
Sbjct: 176 GSVVGSASLRRQSQLLHRYPHLQVVNFRGNVQTRLRKLNEGVCAATLLALAGLKRLDMTE 235
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I IL +D P+ QGAI I + K +E + +NHEDT +++CERAFLA+LDGS
Sbjct: 236 HITAILETDDMLPAIAQGAIGIACRTGDTKMEEYLASLNHEDTRLAISCERAFLAKLDGS 295
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301
C++ IAG A F G+V +DGK E SR G + D I + +DA Q + +
Sbjct: 296 CRTPIAGLAQRTEDGCLFRGLVATTDGKQVLETSRTGSFSYDDMIALAQDAGQELISRAG 355
Query: 302 KNVFNF 307
F +
Sbjct: 356 PGFFQW 361
>gi|102139875|gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 426
Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 125/301 (41%), Positives = 178/301 (59%), Gaps = 5/301 (1%)
Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
R SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGLFT+EI
Sbjct: 123 RDSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGLFTKEI 182
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L SV+G
Sbjct: 183 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 242
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + +
Sbjct: 243 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 302
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+C++ I
Sbjct: 303 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPI 362
Query: 249 AGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVF 305
A +A + F G++ + DG E +R+G D + +G+DA ++ + F
Sbjct: 363 AAYAYRDEDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFF 422
Query: 306 N 306
+
Sbjct: 423 D 423
>gi|312964492|gb|ADR30032.1| porphobilinogen deaminase [Ovis aries]
Length = 350
Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 6 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE D + H ++L
Sbjct: 64 SLFTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++
Sbjct: 124 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILAAAGLQ 183
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL
Sbjct: 184 RMGWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFL 243
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + +G + + +G D
Sbjct: 244 RHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQ 303
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 304 LVGITARNIPRQPQLAAENLGISLATLLLNKGAKNILD 341
>gi|254498735|ref|ZP_05111451.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12]
gi|254352063|gb|EET10882.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12]
Length = 309
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR SPLAL A R L+ + P + ++P++T GD+ L +GG
Sbjct: 1 MNSRIIHIATRQSPLALWQANHVRGLLLK--QWPMLQVELLPMTTSGDKFLKDKLLAVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHSAKDMP + GL ++A R++ DV +S L D
Sbjct: 59 KGLFVKELEEALLDNRADIAVHSAKDMPAEFPAGLGLAAICKRDNPFDVLVSKHYAKLVD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++GT SLRR++ LL +R D+ + RG I TRL KL + + AI+LA AG++R+
Sbjct: 119 LPQQAIVGTGSLRRQSQLLAYRPDLCIKPLRGNINTRLAKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ + P+ QGA+ IE + + EL+ +N + V+ ER A L
Sbjct: 179 FNHAISEQLSEQIMLPACAQGALAIECRTEDQEIHELLAGLNDPLSAVCVHTERQVNALL 238
Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C +A F A + L+ +L DG + + G A + + AQ +
Sbjct: 239 GGNCHVPLAVFCAPTTSNQLFLQAKILNQDGSKIIQNQQTGALDKATVLAYNCAQSLLTQ 298
Query: 300 SNKNVF 305
+
Sbjct: 299 GAATLL 304
>gi|210621716|ref|ZP_03292765.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275]
gi|210154598|gb|EEA85604.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275]
Length = 299
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 3/296 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LAL L + K P + + TKGD+I + +L +IG KGLF
Sbjct: 2 KIRVGTRGSNLALIQTNWAIDRLKE--KFPEVEFEVKIIKTKGDKILHLSLDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-AL 123
+EIE +L+ GEID AVHS KDMP ++++GL+ +A RED RDV I + D +
Sbjct: 60 VKEIESQLLEGEIDLAVHSMKDMPAEVVEGLKFAAVPKREDPRDVIILREGLNSFDELPI 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT S RRK LLR R D++++ RG IETR++K+ + I+LA +G+ R E+
Sbjct: 120 GATIGTGSKRRKYQLLRKRPDLNIVPIRGNIETRISKIESENLDGIVLAASGVIRADLEE 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L ++ P+P QGA+ +E N+ + ++++ I E + + ER++LA +DGS
Sbjct: 180 KITEFLPVDLMIPAPAQGALALEIRENDEELEKMIDAIKDEISQIQTDAERSYLAGIDGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + + G L GI DG+ S G+R + +G + A+ +
Sbjct: 240 CHIPMGAYCEVDGEKLTLTGIFGDEDGEKITVASLEGDRDNPKELGSNLAKLVLKK 295
>gi|71275417|ref|ZP_00651703.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon]
gi|71898589|ref|ZP_00680760.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|170730394|ref|YP_001775827.1| porphobilinogen deaminase [Xylella fastidiosa M12]
gi|238059006|sp|B0U2W8|HEM3_XYLFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71163717|gb|EAO13433.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon]
gi|71731713|gb|EAO33773.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1]
gi|167965187|gb|ACA12197.1| Hydroxymethylbilane synthase [Xylella fastidiosa M12]
Length = 305
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 159/301 (52%), Gaps = 4/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF
Sbjct: 4 LRIATRKSLLAMRQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + +
Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ +
Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC
Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + G+V DG + + +GR AQ + +
Sbjct: 242 VPVGAYASYGVGGMRLQGLVGCVADG-RLVRAELCSAKDEGDMLGRAVAQCLLDAGAAEL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|317122098|ref|YP_004102101.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885]
gi|315592078|gb|ADU51374.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885]
Length = 335
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 109/322 (33%), Positives = 165/322 (51%), Gaps = 19/322 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LA A L H P + ++P++T GDR R L +
Sbjct: 1 MTAPVVRIGTRASALARIQAQWVARELQRHH--PGLQVELVPVTTHGDRHRARPLYTLDT 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F +E+E+ L +G ID AVHSAKD+PT+L +GL+++A+ RED D + +Q
Sbjct: 59 PGAFVKELEEALRAGIIDLAVHSAKDVPTRLPEGLELAAFPQREDPGDALVLPRSQEGLG 118
Query: 121 L-----------------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN 163
+ +GTSSLRR+A L R D+ V RG ++TRL +L+
Sbjct: 119 PNGRDAGRGAGMTALELLPPGARVGTSSLRRQAWLRARRPDLKVEPARGNLDTRLRRLDE 178
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A++LA AG++RL I + P+PGQGA+ +E ++ + LV+V++
Sbjct: 179 GAWDALVLAAAGLRRLGVGHRITAAIPPRALLPAPGQGALAVEIRASDDATRRLVQVLDR 238
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ +V ERAFLAEL G+C+ + +A +G L G+V A DG + E G
Sbjct: 239 PEVALAVRAERAFLAELGGTCRIPLGAWARLEGPRLRLAGMVAAPDGDPWLEEEVEGPAT 298
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
D +GR+ A+ +R ++V
Sbjct: 299 DPEAVGRELAERLRARGAESVL 320
>gi|315453028|ref|YP_004073298.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179]
gi|315132080|emb|CBY82708.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179]
Length = 305
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 154/301 (51%), Gaps = 5/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L + I + TKGD+I + L +IGGKGLF
Sbjct: 4 KLVIGSRGSALALWQARHVQELLKPL----GLESEIKIVKTKGDKILDVPLAKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E L+ G+ID AVHS KD+P L +GL ++ R + +D F+S+ +L+ L +
Sbjct: 60 TKELEVLLLGGKIDLAVHSLKDVPVDLQEGLVLACVSARANPQDCFLSYKYPNLQALPPN 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT+SLRR L R+D + RG ++ RL +L AI+LA AG++RL E
Sbjct: 120 ARIGTTSLRRAMQLKALRTDTDPLSLRGNVQRRLERLQRGDFEAIILACAGVERLGLELP 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L++E+ PS GQGA+ IE N+P ++ +N ++ ER F+ L G C
Sbjct: 180 YRVPLSLEEMIPSMGQGALGIEMRANHPLLDQITS-LNDPNSALCCGLERDFVRALGGGC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A +G + IV DGK F + + R A + + A + +
Sbjct: 239 QVPLGVHARLQGEHIEMRAIVGLVDGKTFIKERASAPRDRAQELAHNLAHTFKQKGALEI 298
Query: 305 F 305
Sbjct: 299 L 299
>gi|149174132|ref|ZP_01852760.1| porphobilinogen deaminase [Planctomyces maris DSM 8797]
gi|148847112|gb|EDL61447.1| porphobilinogen deaminase [Planctomyces maris DSM 8797]
Length = 318
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 104/309 (33%), Positives = 160/309 (51%), Gaps = 7/309 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
EK+P RI TR S LAL A+ L I I+ ++++GDR L+E GG
Sbjct: 6 EKRPLRIATRASNLALWQAYYVSDLLKKQSS--ERPIEIVHITSEGDRDLTSPLSEFGGL 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQS 117
G+FT E++K ++ G D AVHS KD+PT+ GLQ++ R + DV I +
Sbjct: 64 GVFTREVQKAVLDGRADLAVHSLKDLPTEQAPGLQLAGIPERGPLYDVLIFPQGSEAVEH 123
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ DLA + IGT SLRR+A LL RSD+ +++ RG +ETRL KL+ + A+ LA AG+
Sbjct: 124 ITDLADDARIGTGSLRRRAQLLHQRSDLQMLEVRGNVETRLKKLDAGEYDALCLAEAGMV 183
Query: 178 RLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL+ E+ +L + P+ GQGA+ IE ++ + L+ ++ T + ER+
Sbjct: 184 RLELLEQRASLLLQPPEVYPAVGQGALGIECRADDEETAALLAGLSDPPTQAATTAERSL 243
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
LA L C + I + L +VL++DG S G+ +A +IG A+ +
Sbjct: 244 LAHLRAGCHAPIGSLSQTTVDQLTLEAVVLSADGVERICASVTGSLTEAADIGVKVAKAL 303
Query: 297 RFISNKNVF 305
+
Sbjct: 304 LADGAGRLI 312
>gi|149041454|gb|EDL95295.1| hydroxymethylbilane synthase, isoform CRA_a [Rattus norvegicus]
Length = 345
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 157/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 1 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 59 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 119 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQ 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 179 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 298
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 336
>gi|54298727|ref|YP_125096.1| porphobilinogen deaminase [Legionella pneumophila str. Paris]
gi|61213295|sp|Q5X1F2|HEM3_LEGPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|53752512|emb|CAH13944.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Paris]
Length = 309
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPRFKSLDA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + L VL DG + + G +A I + +
Sbjct: 239 GGNCHIPFAVYCTITAEKLLLLRAKVLNLDGSQMIDDEQQGKIEEAEIIADRCTESLMTK 298
Query: 300 SNKNVF 305
++
Sbjct: 299 GAMSLL 304
>gi|323177814|gb|EFZ63398.1| porphobilinogen deaminase [Escherichia coli 1180]
Length = 279
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 148/268 (55%)
Query: 38 IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97
+ ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 2 VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGL 61
Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157
RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TR
Sbjct: 62 VTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 121
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL
Sbjct: 122 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTREL 181
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 182 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 241
Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVF 305
R G +A +G A+ + + +
Sbjct: 242 RRGAPQNAEQMGISLAEELLNNGAREIL 269
>gi|78214363|ref|NP_037300.2| porphobilinogen deaminase [Rattus norvegicus]
gi|56789892|gb|AAH88162.1| Hydroxymethylbilane synthase [Rattus norvegicus]
Length = 361
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 157/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352
>gi|2506505|sp|P19356|HEM3_RAT RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|1911164|emb|CAA72734.1| hemC [Rattus sp.]
Length = 361
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 157/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIK 177
+ L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352
>gi|114051169|ref|NP_001039672.1| porphobilinogen deaminase [Bos taurus]
gi|109892198|sp|Q2KIN5|HEM3_BOVIN RecName: Full=Porphobilinogen deaminase; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS
gi|86438293|gb|AAI12574.1| Hydroxymethylbilane synthase [Bos taurus]
gi|296480113|gb|DAA22228.1| porphobilinogen deaminase [Bos taurus]
Length = 361
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE D + H ++L
Sbjct: 75 SLFTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL
Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + +G + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPRQPQLAAENLGISLATLLLNKGAKNILD 352
>gi|303326737|ref|ZP_07357179.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3]
gi|302862725|gb|EFL85657.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3]
Length = 310
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 158/306 (51%), Gaps = 3/306 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K I TR S LAL A +S L + P + + + TKGD I + L+++GGK
Sbjct: 1 MRKHLVIATRGSRLALWQAEHVKSRLEA--QDPGLTVSLNVIKTKGDIILDVPLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE+ L+ G D AVHS KD+P L +GL + RE D F+S L
Sbjct: 59 GLFVKEIEEALLDGRADLAVHSIKDVPMVLPEGLILGCVPQREACTDCFLSVHYADPDAL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSSLRR+A LL R D+ + RG ++TRL KL N + AI+LA AG+ RL
Sbjct: 119 PQKAHVGTSSLRRQAQLLSMRPDLRISSLRGNVDTRLRKLQNGEYDAIILASAGLNRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
L+ E F P+ GQGA+ IE +N L+ + + T V+ ER FLA L+
Sbjct: 179 SAPYMAPLDPERFLPAVGQGALGIECREDNYDLLVLLASLENRATRVCVDAERGFLAGLE 238
Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAG A T+ G+V DG + +NGN DA +G + A +
Sbjct: 239 GGCQVPIAGHARLVDEETVSLKGLVAEVDGSLILRGEKNGNAADARALGLELAGELLNKG 298
Query: 301 NKNVFN 306
+ +
Sbjct: 299 GRAILE 304
>gi|52842939|ref|YP_096738.1| porphobilinogen deaminase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630050|gb|AAU28791.1| porphobilinogen deaminase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 321
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG
Sbjct: 13 MSAKIIRIATRQSPLALWQANHVREMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L
Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 250
Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + L VL DG + + G +A I + +
Sbjct: 251 GGNCHIPFAVYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 310
Query: 300 SNKNVF 305
++
Sbjct: 311 GAMSLL 316
>gi|126326558|ref|XP_001370512.1| PREDICTED: similar to Porphobilinogen deaminase
(Hydroxymethylbilane synthase) (HMBS)
(Pre-uroporphyrinogen synthase) (PBG-D) [Monodelphis
domestica]
Length = 344
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 156/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA + L D++ P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVAMLKDIY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
LFT+E+E L E+D VHS KD+PT L I A RE D I H + + L
Sbjct: 59 LFTKELEYALEKNEVDLVVHSLKDLPTVLPPAFTIGAVCKRESPYDAVIFHPKYTGQTLG 118
Query: 122 --ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
SVIGTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPERSVIGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILAAAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + ++L E+ + GQGA+ +E + + +LV+V++ +T ERAFL
Sbjct: 179 MGWQSRVGQLLYPEECLYAVGQGALGVEVRAKDQEVLDLVQVLHDPETLLRCIAERAFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVDTTLKDGQLYLTGGVWSLDGSDSLKETMQTTINDSAQHEDGPEDDVQR 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + +N+ +
Sbjct: 299 VGITAQHISQGVQRAAENLGISLANLLLNKGARNILD 335
>gi|158421885|ref|YP_001523177.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571]
gi|158328774|dbj|BAF86259.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571]
Length = 313
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 121/291 (41%), Positives = 161/291 (55%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR SPLAL A R +L P +I I + T GD I +R L+E GGKGLFT+E
Sbjct: 14 IGTRGSPLALWQAHAVRDALAAALARPVESISITVIRTSGDSIQDRALSEAGGKGLFTKE 73
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE++L+ G ID AVHSAKDM T L GL +S +LPR D+RD I +SL DL + I
Sbjct: 74 IEEQLLDGRIDLAVHSAKDMATALPDGLFLSGFLPRADVRDALILREGKSLADLPAGARI 133
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GT+SLRR+A L R R D+ V RG + TRL K+ LLA AG+ RL
Sbjct: 134 GTASLRREAQLRRLRPDLDVSLLRGNVHTRLAKVREGTFDGTLLALAGLTRLGLAHEASA 193
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+L+ + F P+ GQGA+ IE+ V + + I T ++ ERA L LDGSC++
Sbjct: 194 VLDTDAFLPAVGQGAVAIESRVGDEATNGAIAAIACRATGIALAAERALLTALDGSCRTP 253
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
I G A +G + G++L+ DG+ E DA +G D +R
Sbjct: 254 IGGLATVEGDMVRLRGLILSPDGRDAAEADETAPVSDAARLGADMGARLRA 304
>gi|330813348|ref|YP_004357587.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486443|gb|AEA80848.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063]
Length = 321
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 176/304 (57%), Gaps = 2/304 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLM-DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ IG+R S L+LA + + L+ + P I + + T GD+ L +GGK
Sbjct: 4 KQKLIIGSRGSRLSLAQSEHFKDELLLANPDLRPDQIELKVIKTSGDKFKTENLASMGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +EIE++L+ IDCAVHS KD+PT + L+++A+L R+D RD FIS A+S + L
Sbjct: 64 GLFVKEIEQELLENNIDCAVHSLKDVPTFGVPSLKLAAFLKRKDERDAFISPVAKSFETL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S +GTSS+RR A L + RSD++++ RG I+TR+ K+ +I+LAYAG+KRL
Sbjct: 124 KPGSTVGTSSVRRIAQLKKLRSDLNIVSMRGNIDTRIEKVKEGIYDSIVLAYAGLKRLGF 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ EIL+ E P+ GQG + I+ N+ + +L+K +N ++T V+ ER+FL ++
Sbjct: 184 HTHVSEILDKEKMLPAAGQGVVTIQCRSNDGELIKLLKSVNDKETEIIVSAERSFLHRVN 243
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G+C + +A A ++ +L+ DGK R G A++IG D A+ I +
Sbjct: 244 GACDTPVAVNAVLNDDGEVFIQAEILSLDGKKVFNAHRTGISEKAVSIGLDVAEEILDKA 303
Query: 301 NKNV 304
+
Sbjct: 304 GHDF 307
>gi|311031438|ref|ZP_07709528.1| porphobilinogen deaminase [Bacillus sp. m3-13]
Length = 310
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + P + + + TKGD+I + TL+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNWVIDQLKALGA--PFDFEVKEIVTKGDQILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ +ID AVHS KDMP L +GL I RED RD FIS DL
Sbjct: 59 LFVKEIEQAMLDKDIDMAVHSMKDMPAVLPEGLTIGCIPFREDHRDAFISKDHVKFADLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR A LL R D+ + RG I+TRL KL N AI+LA AG+ R+
Sbjct: 119 SGSIVGTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLQNEDYDAIILAAAGLARMGWS 178
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
V+ E L+ + P+ GQGA+ IE ++ E++K+ T +V ERAFL +++
Sbjct: 179 KDVVTEFLDEDLCLPAVGQGALSIECREDDADLLEVLKLFTDSVTEKAVIAERAFLHKME 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C+ IAGFA + L +V A DG + ++ G D + +G +AA+ +
Sbjct: 239 GGCQVPIAGFASVGQDDNLTLTVLVGAPDGSVLYKERITGT--DPVKVGLEAAESLTAQG 296
Query: 301 NKNVFN 306
K + +
Sbjct: 297 GKKIID 302
>gi|134094241|ref|YP_001099316.1| porphobilinogen deaminase [Herminiimonas arsenicoxydans]
gi|133738144|emb|CAL61189.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Herminiimonas
arsenicoxydans]
Length = 317
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 165/303 (54%), Gaps = 2/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A R L ++ P I I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLALLY--PQCAIEILGMTTRGDQILDRTLSKVGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + D AVHS KD+P L +G ++A L RED RD F+S+ SL DL
Sbjct: 65 FVKELEVAIAERRADLAVHSLKDVPMSLPEGFALAAVLEREDPRDAFVSNDYASLDDLPD 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+AL+ + + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 GAIVGTSSLRRQALIAARYPKLVIRPLRGNLDTRLGKLDKGEYAAIILAAAGLKRLGMPQ 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L+ E P+PGQGA+ IE H + QE + +NHE T +V ER GS
Sbjct: 185 RIRAVLDPEQSLPAPGQGAMGIEIHADRADLQEWLAPLNHEATAQAVTAERTVSRNFGGS 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ +A FA + T+ ++ DGK NG +G A+ +
Sbjct: 245 CQIPLAAFATIENGTMRLRAMIATPDGKRVARADLNGAAHAPEALGGQIAELLHQQEANA 304
Query: 304 VFN 306
+
Sbjct: 305 ILE 307
>gi|289642295|ref|ZP_06474444.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata]
gi|289507930|gb|EFD28880.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata]
Length = 313
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 104/310 (33%), Positives = 159/310 (51%), Gaps = 7/310 (2%)
Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + RIGTR SP+ALA A R+ L ++ P I+P++T GDR T L+ +G
Sbjct: 3 MSASRLIRIGTRSSPMALAQAERVRAELTALN--PDLTAEIVPITTSGDRWTG-PLSTLG 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG--LQISAYLPREDIRDVFISHTAQS 117
GKG FT+E+++ L++G D AVH KD+P +AYLPR+DIRD I ++
Sbjct: 60 GKGAFTKEVDEALLAGRADLAVHCMKDVPGDRPVPAGTVFAAYLPRDDIRDALIHPGGRT 119
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L + +GTS++RR A L + + + RG TRL +L++ A A+LLA +G++
Sbjct: 120 LDQLPAGTRVGTSAVRRIAQLAQSHPHLETVPIRGNANTRLARLDDGAADALLLAVSGLE 179
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + I EIL+ E P G G + ++ ++ +LV ++ D V ER L
Sbjct: 180 RIGQAGRITEILSAETMCPPIGAGVLGLQCREDDTDTAQLVAGMDDIDARRQVTAERMLL 239
Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C S IAG A+ + L V + DGK + G D +G A +
Sbjct: 240 HVLQGHCNSPIAGHAHTEPDGRLSLRAKVFSPDGKTVLDAHEWGPGTDPTTLGASVAVAL 299
Query: 297 RFISNKNVFN 306
+++ N
Sbjct: 300 LRQGAQDLLN 309
>gi|61213316|sp|Q5ZRY6|HEM3_LEGPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG
Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L
Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 238
Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + L VL DG + + G +A I + +
Sbjct: 239 GGNCHIPFAVYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 298
Query: 300 SNKNVF 305
++
Sbjct: 299 GAMSLL 304
>gi|110636914|ref|YP_677121.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406]
gi|123163848|sp|Q11XT5|HEM3_CYTH3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110279595|gb|ABG57781.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406]
Length = 312
Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 161/306 (52%), Gaps = 6/306 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S LAL A + L P I+ + T GD+I +++L++IG K
Sbjct: 1 MNKTVRIGTRGSKLALWQAEHVAACLQTKGLEP----QIVIIDTTGDKILDQSLSKIGSK 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFTEE+E++L +G ID AVHSAKD+ T L G+ I A RE + DV +SH
Sbjct: 57 GLFTEELEEQLHAGTIDIAVHSAKDLQTHLKGGMYILAITERELVNDVLVSHKPIDTLKN 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+IGTSS RR+ALL ++ ++D RG ++TR+ K+ A+LLAYAG+ R+
Sbjct: 117 NPDLIIGTSSTRRRALLRKFYPQAKMVDMRGNLQTRIRKMEEGACDAMLLAYAGMHRMGY 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE--LVKVINHEDTWDSVNCERAFLAE 239
+ +IKE L++E+F P+ GQG + IE K + + V+N T +V+ ERAFL
Sbjct: 177 DSLIKEKLSLEEFIPAAGQGTLAIEAASTLDKEKAAVIRAVLNDAATETAVSAERAFLRT 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C + A + + G +++ DG + DA G + A +
Sbjct: 237 LEGGCSIPVFALAVERDTDYLLTGGIVSLDGTKYLRKEIRFTAADAEQRGVELATVLLKD 296
Query: 300 SNKNVF 305
+
Sbjct: 297 GADEIL 302
>gi|194290490|ref|YP_002006397.1| porphobilinogen deaminase [Cupriavidus taiwanensis LMG 19424]
gi|193224325|emb|CAQ70336.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Cupriavidus taiwanensis LMG 19424]
Length = 336
Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 5/305 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 19 QKLVIASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGL 76
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + G D AVHS KD+P +L G ++A + RED RD +S SL ++
Sbjct: 77 FVKELEFAMDEGRADLAVHSLKDVPMELPPGFTLAAVMEREDPRDALVSSAYASLDEMPP 136
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR+A L + V RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 137 GTVVGTSSLRREAALRSRYPHLVVKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGD 196
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ ++ +E P+ GQGA+ IET P+ E + +NH+ T +V ERA L GS
Sbjct: 197 RIRALIPLEASLPAAGQGALGIETLSTRPELAEWLAPLNHQPTALAVTAERAVSRRLGGS 256
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKI---FHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C+ +A A G L V DG + A +G+ A +
Sbjct: 257 CQVPLAAHARWDGDQLRLEAFVALPDGSRAIRAAAAGPAADLAAAEALGQACAGDLLAQG 316
Query: 301 NKNVF 305
+++
Sbjct: 317 AESIL 321
>gi|148358525|ref|YP_001249732.1| porphobilinogen deaminase [Legionella pneumophila str. Corby]
gi|148280298|gb|ABQ54386.1| porphobilinogen deaminase [Legionella pneumophila str. Corby]
Length = 321
Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG
Sbjct: 13 MSAKIIRIATRQSPLALWQANHVRKMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 70
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL
Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLAAICKRDNPFDALISPQFKSLDA 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+
Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L
Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 250
Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G+C A + L VL DG + + G +A I + +
Sbjct: 251 GGNCHIPFAVYCTITEEKRLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 310
Query: 300 SNKNVF 305
++
Sbjct: 311 GAMSLL 316
>gi|94264595|ref|ZP_01288379.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1]
gi|93454949|gb|EAT05186.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1]
Length = 311
Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 108/285 (37%), Positives = 161/285 (56%), Gaps = 2/285 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR S LALA A + + H P + ++ + TKGD+I + L ++GGKGL
Sbjct: 3 NNIRIGTRASMLALAQANWIKGRIEAQH--PQCRVELVKIITKGDKIVDVPLAKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ ++ GE+D AVHS KD+P +L +GL I RE+ D F+S+ Q+++ L
Sbjct: 61 FVKEIEEAMLRGEVDIAVHSMKDVPAELPQGLHIGIITQRENPFDAFVSNLYQNIEALPT 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSSLRRK+ L R D+++ D RG ++TRL KL+ + I+LA AG+ RL
Sbjct: 121 GARVGTSSLRRKSQLAALRPDLTIEDLRGNLDTRLRKLDEGQYDGIILAAAGLNRLDLAH 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E P+ QGA+ IE + E++ ++H T +V ERA+L L+G
Sbjct: 181 RATFYFQAEQMLPAVAQGAVGIELRRADADLLEMLSFMDHRATTLAVKAERAYLKRLEGG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
C+ +AGFA G L +V A DG +VS++G +A I
Sbjct: 241 CQVPLAGFATLDGDRLQLDTLVAAIDGSRLLKVSKSGPAEEAEEI 285
>gi|15807343|ref|NP_296073.1| porphobilinogen deaminase [Deinococcus radiodurans R1]
gi|11386849|sp|Q9RRY0|HEM3_DEIRA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|6460165|gb|AAF11898.1|AE002066_2 porphobilinogen deaminase [Deinococcus radiodurans R1]
Length = 309
Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGG 60
+ +GTR S LALA + L + + P + I +STKGDR L + G
Sbjct: 1 MRTVTVGTRGSTLALAQTRWVVARLKE--EWPETDFRIQTISTKGDRNRESLEQLAQKGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119
KG + +EIE+ L++ +ID AVHS KD+PT+ +GL+IS+ R D RD I + L
Sbjct: 59 KGFWVKEIEEALLAKKIDIAVHSLKDLPTEQPEGLEISSIPKRVDGRDALIGREGMKKLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + IGTSS+RRKA L +R D+ V D RG I+TRL L + + AI+LA AG+ R
Sbjct: 119 ELPEGARIGTSSVRRKAFLRAYRPDLIVKDLRGNIDTRLAALGSGEYDAIILAAAGLIRT 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ I E ++ + P+PGQGA+ +ET + E+ I+ T D + ER FLA
Sbjct: 179 EQRHRIDEFVDPDILLPAPGQGALALETRTEDDLTIEVAYAIHDHATDDRITAEREFLAG 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L C + + A K L G V A DG + G+ + +IG + A +
Sbjct: 239 LGAGCMAPVGAHAVIKNGLLTLEGWVGALDGTQVIRATSQGDVAECADIGAELAADMLER 298
Query: 300 SNKNVFN 306
+
Sbjct: 299 GAAELIE 305
>gi|291412990|ref|XP_002722769.1| PREDICTED: hydroxymethylbilane synthase [Oryctolagus cuniculus]
Length = 365
Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 22 MRVIRVGTRKSQLARIQTDSVVATLKTLY--PGLRFEIIAMSTTGDKILDTALSKIGEKS 79
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G + A RE+ D + H ++L
Sbjct: 80 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTVGAICKRENPCDAVVFHPKFVGKTLA 139
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 140 TLPERSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEQQEFSAIILAVAGLQR 199
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 200 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLK 259
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 260 HLEGGCSVPVAVHTAMKDGQLYMTGGVWSLDGSDTMQETMQASIQVPAQHEDGPEDDPQL 319
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 320 VGITARNIPRGPQLAAENLGISLANLLLNKGAKNILD 356
>gi|242373962|ref|ZP_04819536.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1]
gi|242348316|gb|EES39918.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1]
Length = 308
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 176/305 (57%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L ++ P +I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDELKEIE--PDLDIEIKEIVTKGDKIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +IS L +L
Sbjct: 59 LFVKEIQNELFNKDIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG++R+
Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLNKLETEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + +L+K +++ + V ER FL+E+D
Sbjct: 179 DDIVTTYLDKDILLPAIGQGALGIECRSDDEELLDLLKKVHNHEVAQCVTAERTFLSEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A G+ + F G+++ DGK +E + G+ + + +G++ ++ ++
Sbjct: 239 GSCQVPIGGYATIDGNSQIEFTGLIMTPDGKERYEHTARGH--NPVELGQEVSRVLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|171319139|ref|ZP_02908260.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5]
gi|171095659|gb|EDT40618.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5]
Length = 328
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 131 AVVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 191 IRTLIDVEDSPPAAGQGALGIEIAAHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DG+ G DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGA 310
Query: 302 KNVFN 306
+++ N
Sbjct: 311 RDIVN 315
>gi|168703144|ref|ZP_02735421.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246]
Length = 299
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 102/298 (34%), Positives = 155/298 (52%), Gaps = 2/298 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P ++GTR SPLAL A L V + P + ++ + T GDR L+ +GG G+F
Sbjct: 4 PLKLGTRGSPLALWQANYIAELLRPV--VAPRPVELVLIETHGDRDQASALSAMGGFGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ I+ L+ G D AVHS KD+PT L+++A PR D F+S + DL
Sbjct: 62 TKAIQNALLDGRADVAVHSLKDLPTIPEPRLELAAVPPRGPTGDAFVSRKHKRFDDLHPG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR+A +L R D+ ++D RG ++TRL KL++ AI+LA AG+ RL
Sbjct: 122 ATVGTSSLRRRAQVLNRRPDLKLLDLRGNVDTRLRKLDDLGLDAIVLAEAGLARLGLADR 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I EIL+ P+ GQGAI +E ++ + + ++ + E T+ V ERA L L G C
Sbjct: 182 ITEILDPSWMLPAVGQGAIGLECRSDDGETKLVLAQVRCESTFARVQAERAMLYALGGGC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
I + L G VL+ DG+ + G +++G++ A +
Sbjct: 242 LVPIGATSKVLDGVLTVRGAVLSPDGRRRIVGTHEGLMRAPLSVGQELAGILLAEGAD 299
>gi|223044144|ref|ZP_03614183.1| porphobilinogen deaminase [Staphylococcus capitis SK14]
gi|222442538|gb|EEE48644.1| porphobilinogen deaminase [Staphylococcus capitis SK14]
Length = 309
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKKV--DPDLDIEIKEIVTKGDQIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L
Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELT 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+D
Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMD 238
Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A G + F G+++ DGK +E + G D + +G++ ++ ++
Sbjct: 239 GSCQVPIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|93004929|ref|YP_579366.1| porphobilinogen deaminase [Psychrobacter cryohalolentis K5]
gi|92392607|gb|ABE73882.1| hydroxymethylbilane synthase [Psychrobacter cryohalolentis K5]
Length = 345
Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats.
Identities = 102/330 (30%), Positives = 165/330 (50%), Gaps = 31/330 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR SPLAL A R+ L+ ++ P I ++ + TKGD+I + L +IGGKGLF
Sbjct: 11 TLNIATRQSPLALWQAEHIRNRLLALY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L
Sbjct: 69 VKELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIAELPQG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT+SLRR+ + +R D+ + RG + TRL+KL+ + AI+LA +G+KR++ +
Sbjct: 129 AVVGTASLRRQCQIKAYRPDLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLKRIELDAR 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ L+I P+ GQGA+ IE ++ +L+ +N + + ERA L G C
Sbjct: 189 IRSELDINICLPAVGQGALAIECREDDADVLKLLAPLNDDKARIRLIAERALNRHLQGGC 248
Query: 245 KSAIAGFAYCKG---------------------STLYFYGIVLASDGKIFH----EVSRN 279
+ IA +A + TL+ G V DG +
Sbjct: 249 QVPIAAYAVLQKADALAADNDSNDNDNGNNDAGDTLWLRGRVGQEDGSELLKVDKRQTLT 308
Query: 280 GNRCD----AINIGRDAAQYIRFISNKNVF 305
G++ + A +G + A+ + +
Sbjct: 309 GSQAEQEAQANQLGIEVAEMLLQAGAGEIL 338
>gi|323525182|ref|YP_004227335.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001]
gi|323382184|gb|ADX54275.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001]
Length = 349
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD +S+ SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALATIMEREDPRDALVSNDYDSLAALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAER 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+ +A +A L+ G+V DG+ + A+ +GR+ A +
Sbjct: 250 EVPLAAYATWHDGALHLRGVVATPDGQRVLSAHASAPAPTTERAVALGREVASALEQQGA 309
Query: 302 KNV 304
+
Sbjct: 310 MEI 312
>gi|56856|emb|CAA29984.1| unnamed protein product [Rattus norvegicus]
Length = 344
Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 104/337 (30%), Positives = 155/337 (45%), Gaps = 35/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + ++L+
Sbjct: 59 LFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFEGKFIGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKR 178
L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER FL
Sbjct: 179 MGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERDFLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 239 HLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQL 298
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 299 VGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 335
>gi|319943887|ref|ZP_08018168.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599]
gi|319743120|gb|EFV95526.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599]
Length = 315
Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR S LAL A L H ++ ++T+GD+I +R L EIGGKGLF
Sbjct: 9 PLRIATRESRLALWQANHVAELLRARHPAAGVA--LLGMTTRGDQILDRPLAEIGGKGLF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E L G + AVHS KD+P L +G ++A + R D RD F+S SL +L
Sbjct: 67 TKELEVALFDGRAELAVHSLKDVPMDLPEGFDLAAVMTRADARDAFVSTRYASLDELPPD 126
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR A L + RG ++TRL KL+ + AI+LA AG+ RL
Sbjct: 127 AVVGTSSLRRAAQLQARHPGFRIQPLRGNLDTRLGKLDAGQYDAIVLAAAGLTRLGLADR 186
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I++ L +++ P+PGQG + IE + ++ + +N + ERA +L G+C
Sbjct: 187 IRQYLPLDEMLPAPGQGMLGIEIRADRDDVRQALAFLNDPEAARIAAAERAVSRQLGGNC 246
Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN---IGRDAAQYIRFIS 300
K+ +A A + ++ DG V+R G D +G A ++
Sbjct: 247 KTPLAAHARFTASGQMQLDALLADDDG-RIARVTRVGKVADPKEARVMGEAVAAELKAQL 305
Query: 301 NK 302
Sbjct: 306 AA 307
>gi|242242934|ref|ZP_04797379.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144]
gi|242233535|gb|EES35847.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144]
Length = 308
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 174/305 (57%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+
Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELS 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+D
Sbjct: 179 DNIVTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMD 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++
Sbjct: 239 GSCQVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLKKQG 296
Query: 301 NKNVF 305
++
Sbjct: 297 AYDII 301
>gi|229543656|ref|ZP_04432716.1| porphobilinogen deaminase [Bacillus coagulans 36D1]
gi|229328076|gb|EEN93751.1| porphobilinogen deaminase [Bacillus coagulans 36D1]
Length = 310
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L + P I ++TKGD++ + TL+++GGKG
Sbjct: 1 MRTIVVGSRRSKLALTQTKWVVAKLEQLGL--PFRFEIREITTKGDKVLDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE +++ EID AVHS KD+P L GL I RED+RD IS L
Sbjct: 59 LFVKEIEDAMLNHEIDMAVHSMKDVPAVLPDGLVIGCIPEREDVRDALISKNGTPFSSLK 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+KR+
Sbjct: 119 EGAVVGTSSLRRGAQLLAVRSDIRIKSVRGNIDTRLEKLKNGDYDAIVLAAAGLKRMGWS 178
Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + + P+ GQGA+ +E ++ + + ++ ++ +T ++V ER FL +++
Sbjct: 179 ADTVTEFFDPDICLPAIGQGALAVECRADDGELLDALRKLDSAETAETVKAERVFLDKME 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ IAG A + +V + DGK ++ + + + + G AA +
Sbjct: 239 GGCQVPIAGLAKKTAEGISLTALVASPDGKTVYKETVVSH--NPVTAGEKAADILSRQGA 296
Query: 302 KNVFN 306
K +
Sbjct: 297 KALIE 301
>gi|224437777|ref|ZP_03658724.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
gi|313144223|ref|ZP_07806416.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
gi|313129254|gb|EFR46871.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818]
Length = 323
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 108/318 (33%), Positives = 172/318 (54%), Gaps = 17/318 (5%)
Query: 1 MEK---KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M+ + IGTR S LAL A ++ L D + + + T+GD+I + L +
Sbjct: 1 MQNVADRKLIIGTRGSALALWQAQYVKNRLKDECR---LDSEFKIIKTQGDKILDVPLAK 57
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IGGKGLFT+E+E+KL+ EID AVHS KD+P ++L L ++A RED RD F+S +S
Sbjct: 58 IGGKGLFTKELEQKLLDKEIDLAVHSLKDVPVEILPLLDLAAITEREDCRDCFLSMKYES 117
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L+ + +GT+SLRR + +R+D+ + RG I+TRL KL N AI+LA AG+K
Sbjct: 118 LESLSQGARVGTTSLRRSMQIKAFRADLDTLSLRGNIQTRLEKLKNGVFDAIILAQAGVK 177
Query: 178 RLKKEKVI-----KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
RL + I+ ++ P+ GQGA+ IE ++P E + + H+ + V+
Sbjct: 178 RLGIDVKKNDMGICHIVPLDFMIPAMGQGALGIEMRKDSPY-FETISRLTHKRSALCVSA 236
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AIN 287
ER+F+ EL+G C+ I A + L +V +G+ + S + + A +
Sbjct: 237 ERSFVRELEGGCQVPIGVQAMYENGILRLRAMVGLPNGQEILQESLEDSILEEDKAKAES 296
Query: 288 IGRDAAQYIRFISNKNVF 305
+G++ AQ K +
Sbjct: 297 LGKNLAQSFIAKGAKEIL 314
>gi|256425452|ref|YP_003126105.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588]
gi|256040360|gb|ACU63904.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588]
Length = 307
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR S LAL A + + L ++ V++P+ ++GD L EIG +
Sbjct: 1 MNREIKIGTRDSQLALWQANKVKGLLEAQ----GYSTVLVPIKSEGDIDLVTPLYEIGVQ 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKD 120
G+FT+ ++ L++G ID AVHS KD+PT+L K + +A L R ++D+ + L
Sbjct: 57 GIFTKSLDIALLNGRIDIAVHSLKDVPTQLPKNIIQAAVLERGPVKDLLVYRQDTAFLGQ 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ I TSS+RRKA LR + + RG + TRL KL + A AG++R+
Sbjct: 117 PEYIANIATSSVRRKAQWLRKYPKHQLHNLRGNVNTRLQKLAAENWDGAIFAAAGLERIG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ P+P QGA+ ++ ++ N T ER FL L
Sbjct: 177 V--RPATSIELDWMLPAPAQGAVVAVCREDDDFCRQACAPFNDLATALCTRVERDFLRTL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C + I+ +A T++F G + + DG+ ++ DA IGR AA+ I
Sbjct: 235 MGGCTTPISAYATISNETVHFSGELCSLDGQQLFTITEQLPLQDAGVIGRSAAEKILAQG 294
Query: 301 NKNV 304
+
Sbjct: 295 GDKI 298
>gi|84494981|ref|ZP_00994100.1| porphobilinogen deaminase [Janibacter sp. HTCC2649]
gi|84384474|gb|EAQ00354.1| porphobilinogen deaminase [Janibacter sp. HTCC2649]
Length = 329
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 8/304 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LA + L + H++ ++ ++T GDR L +GG G+F
Sbjct: 2 TLRLGTRRSALATTQSGWVADQLRAL----GHDVELVEITTDGDRDRTTPLATMGGTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L +G +D AVHS KD+PT L ++A PRED RD ++ +L +L
Sbjct: 58 VSALRDALRAGTVDLAVHSLKDLPTTPEDDLAVAAIPPREDPRDALVARDGLTLGELPSG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GT S RR+A L + + + RG ++TRL ++ + A++LA AG+ RL + V
Sbjct: 118 STVGTGSPRRRAQLEALGLGLDIRELRGNVDTRLGRVTSGDLDAVVLAQAGLARLGRTSV 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E+++ P+PGQGA+ +E ++ ++ V ++ DT V+ ERA L+EL+ C
Sbjct: 178 VTEVIDPIQMLPAPGQGALAVEVRADDAATRDAVAALDDADTRACVDAERAVLSELEVGC 237
Query: 245 KSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ + A G L +V + DG S G+ DA IGR A+ +
Sbjct: 238 SAPVGALAEIVLGDDGDELSLRAVVASPDGTGDIRRSATGSPTDADGIGRRLARLLLEDG 297
Query: 301 NKNV 304
++
Sbjct: 298 AADL 301
>gi|124005986|ref|ZP_01690823.1| porphobilinogen deaminase [Microscilla marina ATCC 23134]
gi|123988393|gb|EAY28039.1| porphobilinogen deaminase [Microscilla marina ATCC 23134]
Length = 308
Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 158/303 (52%), Gaps = 7/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L ++ + TKGD+I N+ L++IG KG+FT
Sbjct: 3 IRIGTRGSKLALWQANYVADLLQK----GGATTELVMVETKGDKILNKALSKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124
EE+E+ L E+D AVHSAKD+ + L L++ A+ RE++ DV I +T L
Sbjct: 59 EELEEHLRQKEVDIAVHSAKDVQSTLPDDLELIAFSEREEVHDVLISFNTDARLDTFNSS 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+IGTSS RR A L + I D RG ++TR+ KL A++LAYAG+ R+ K
Sbjct: 119 YIIGTSSTRRVAQLKHYYPKIRTADVRGNLQTRMKKLEKGNYDALILAYAGVHRMGFSKY 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L+ F P+ GQG + IE NN K + + +N + T + ER+FL L+G
Sbjct: 179 IVEDLSPNKFIPAVGQGCVAIEAAKDLNNDKVAMIRQCVNDKKTEQCLRAERSFLKTLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + G A K + + G +++ +G+ + G D ++IG+ A+ I +
Sbjct: 239 GCSIPVFGLARIKKNQIELKGGIISLNGQDLVKQQAKGVLDDGVSIGKQLAERILQDGGE 298
Query: 303 NVF 305
+
Sbjct: 299 EIL 301
>gi|164687765|ref|ZP_02211793.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM
16795]
gi|164603539|gb|EDQ97004.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM
16795]
Length = 298
Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats.
Identities = 100/296 (33%), Positives = 153/296 (51%), Gaps = 3/296 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LAL L + P + + TKGD I + L +IG KGLF
Sbjct: 2 KLVVGTRGSNLALVQTNWVVDQLKKEN--PGVEFEVKIIKTKGDLIKDLPLDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLAL 123
+EIEK L+ GEID AVHS KDMP+ L +GL+ + RED RD I +SL DL
Sbjct: 60 VKEIEKSLLDGEIDMAVHSMKDMPSYLPEGLKFAHSPKREDPRDALIFKEGYKSLDDLPQ 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT S RRK LL+ R D+ ++ RG IETR+ K+ K ++LA +G++R +
Sbjct: 120 GARIGTGSKRRKYQLLKHRPDLEIVPIRGNIETRIKKIETEKLDGVVLAASGLRRAGLDD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + + P+P QG + +E ++ + ++++ I + T ++ ER FL ++GS
Sbjct: 180 KIDYYIPTDIMLPAPAQGILALEIREDDKETEKIIDSIKDDITKIQIDAERGFLIGVNGS 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + + +G + G+ +GK S+ G DA IG + A+ +
Sbjct: 240 CHIPMGAYCEIEGEKITLTGLYGDGEGKKIVVQSQVGTLADAPKIGYELAKSVLKE 295
>gi|209516094|ref|ZP_03264954.1| porphobilinogen deaminase [Burkholderia sp. H160]
gi|209503554|gb|EEA03550.1| porphobilinogen deaminase [Burkholderia sp. H160]
Length = 332
Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P + I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCEVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFVLSTIMEREDPRDALVSNQYDSLAALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L ++ V RG ++TR+ KL+ AI+LA AG+KRL
Sbjct: 130 AVVGTSSLRREAMLRMRYPNLDVRPLRGNLDTRVAKLDRGDYAAIILAAAGLKRLGLADR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+ +A +A L+ GIV DG+ + A+ +G + A +
Sbjct: 250 EVPLAAYATWGDGALHLRGIVATPDGQRVLSAQASAPAPTLERALALGEEVAHSLVQQGA 309
Query: 302 KNV 304
++
Sbjct: 310 LDI 312
>gi|161702955|ref|YP_369990.2| porphobilinogen deaminase [Burkholderia sp. 383]
Length = 334
Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 166/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
++
Sbjct: 316 LDI 318
>gi|73662403|ref|YP_301184.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123761533|sp|Q49YA2|HEM3_STAS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72494918|dbj|BAE18239.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 308
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L + P I I + TKGD I ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSRQFIDKLKAI--DPSLEIEIKEIVTKGDLIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + ID A+HS KD+P+ + GL + RE+ D +I+ L +L
Sbjct: 59 LFVKEIQNELFNHGIDMAIHSLKDVPSVIPDGLTLGCIPDRENPYDAYIAKNHVPLNELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+
Sbjct: 119 DNSIVGTSSLRRGAQILAKYPKLQIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ E P+ GQGA+ IE ++ L+ ++++D D V ER FL ++
Sbjct: 179 DDIVTSYLDKETLIPAIGQGALGIECRSDDETLLSLLSKVHNQDVADCVTAERTFLTRMN 238
Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + T+ F G++++ DGK ++ + G D + +G + + +
Sbjct: 239 GSCQVPIGGYATKEADGTIEFTGLIMSPDGKERYQHTVRGT--DPVALGEEVTKVLNEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|116690445|ref|YP_836068.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424]
gi|105893551|gb|ABF76716.1| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054]
gi|116648534|gb|ABK09175.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424]
Length = 403
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 87 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 144
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 145 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 204
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 205 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 264
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 265 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 324
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 325 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 384
Query: 302 KNV 304
++
Sbjct: 385 LDI 387
>gi|154148130|ref|YP_001406461.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381]
gi|166201500|sp|A7I1S0|HEM3_CAMHC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|153804139|gb|ABS51146.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381]
Length = 308
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RI TR S LAL + ++ + + + + + TKGD I + L +IGGKG
Sbjct: 1 MNKLRIATRGSALALWQSKYIQNLIENNT---EVEVELQSMKTKGDVILDTPLAKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ GE D AVHS KD+P KGL ++A RED+RD F+S S +L
Sbjct: 58 LFTKELEESMLRGESDLAVHSLKDVPVVFPKGLILTAISEREDVRDSFVSEKFASFNELP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRK LL R D+ +I RG I TRL KL N+ AI+LA AG+KRL
Sbjct: 118 KGAKVGTTSLRRKMQLLIKRPDLKIISLRGNINTRLRKLKENEFDAIILASAGLKRLNLM 177
Query: 183 KVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IK + +++ P+ GQGA+ IE + + E++K IN+E++ + ER F+A+L
Sbjct: 178 ENIKYFVPFSLDEMIPAMGQGALGIECV-DKSEVIEILKFINNENSVIATTIERDFVAKL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A G + IV DG F + R ++ D N G A
Sbjct: 237 NGGCQVPIGVNAEISGDIIKVRAIVGLPDGSEFIKDKREISKADFKNFGTKLADEFISRG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AIELL 301
>gi|77967966|gb|ABB09346.1| Porphobilinogen deaminase [Burkholderia sp. 383]
Length = 378
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 166/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 62 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLF 119
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 120 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 179
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 180 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETR 239
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 240 IRALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 299
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 300 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 359
Query: 302 KNV 304
++
Sbjct: 360 LDI 362
>gi|152992229|ref|YP_001357950.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1]
gi|166217789|sp|A6Q7Y4|HEM3_SULNB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151424090|dbj|BAF71593.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1]
Length = 323
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 10/312 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK I TR S LAL A+ + + P + + +++KGD+I ++ L +GG
Sbjct: 1 MEK--LVIATRASNLALWQAYHIKERIETA--FPEVRVELNEITSKGDKILDKPLALVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG FT+E+E ++I+G AVHS KD+PT + +GL++ A R+D DVF+SHT +SL +
Sbjct: 57 KGHFTKELEDEMIAGNAHLAVHSLKDVPTYIPEGLELCAITERQDQSDVFLSHTYKSLSE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GT+SLRR+ LL R D+ V D RG + TRL KL + AI+LAY G+ RL
Sbjct: 117 LPEGAVVGTTSLRRRMQLLEKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAYIGLYRLD 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K I + ++ F P GQ A+ IE NN + +E+ +NHE T+ ER F++ +
Sbjct: 177 LLKDIPYVEKLDFFIPPMGQAALGIEIVANNDRIREIAMTLNHEPTFICTKVERDFISVI 236
Query: 241 DGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C + +A A T+ ++ DG S +A +G + AQ
Sbjct: 237 GAGCSAPVAVNATMDKKEDDKVPTISVRAMIGYPDGTHILHKSLTVPLNEADILGDELAQ 296
Query: 295 YIRFISNKNVFN 306
+ ++
Sbjct: 297 AMIEEGALDILE 308
>gi|295675858|ref|YP_003604382.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002]
gi|295435701|gb|ADG14871.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002]
Length = 332
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNQYDSLAALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 130 AVVGTSSLRREAMLRMRYPHLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLADR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A +A L+ GIV DG+ + A+ +G + AQ +
Sbjct: 250 EVPLAAYATWGDGALHLRGIVATPDGQRVLSAQASAPAPTVERALALGEEVAQSLAQQGA 309
Query: 302 KNV 304
+
Sbjct: 310 LEI 312
>gi|154174368|ref|YP_001408386.1| porphobilinogen deaminase [Campylobacter curvus 525.92]
gi|259647805|sp|A7GYU4|HEM3_CAMC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112802609|gb|EAT99953.1| porphobilinogen deaminase [Campylobacter curvus 525.92]
Length = 311
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 156/305 (51%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR S LAL + ++ LM H + ++ + TKGD I + L +IGGKG
Sbjct: 1 MKILKIATRKSALALWQSEHIKARLMAQHA--GLQVELVGMKTKGDVILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++SG+ AVHS KD+P L GL ++A RED+RD IS DL
Sbjct: 59 LFTKELEDSMLSGQTHIAVHSLKDVPVAFLDGLVLAAICSREDVRDAMISQRYVKFDDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRRK LLR R D+++I RG ++TRL KL + AI+LA AGI RL
Sbjct: 119 QSAKVGTTSLRRKMQLLRMRPDLNIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNLA 178
Query: 183 KVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I + P+ GQGA+ +E + + E +K +N E + ER F+ L
Sbjct: 179 DEVAHIYPFDIAQMTPAMGQGALGVEAVDDA-QILEKIKFLNDERSVIETRVERDFVTLL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A + IV DG + + + ++G++ A+
Sbjct: 238 EGGCQVPIGINARLASEEIEINAIVGLPDGSEVITENLTAKKSEFESVGKELAREFIARG 297
Query: 301 NKNVF 305
K +
Sbjct: 298 AKELL 302
>gi|27468263|ref|NP_764900.1| porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57867145|ref|YP_188808.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A]
gi|251811065|ref|ZP_04825538.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875909|ref|ZP_06284776.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135]
gi|293366381|ref|ZP_06613060.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|38258087|sp|Q8CNY8|HEM3_STAES RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71152115|sp|Q5HNN3|HEM3_STAEQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|27315809|gb|AAO04944.1|AE016748_178 porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57637803|gb|AAW54591.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A]
gi|251805400|gb|EES58057.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294934|gb|EFA87461.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135]
gi|291319506|gb|EFE59873.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733769|gb|EGG70095.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU045]
gi|329737359|gb|EGG73613.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU028]
Length = 308
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 173/305 (56%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+
Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELS 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+D
Sbjct: 179 DNIVTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMD 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++
Sbjct: 239 GSCQVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLKKQG 296
Query: 301 NKNVF 305
++
Sbjct: 297 AYDII 301
>gi|311745811|ref|ZP_07719596.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1]
gi|126576013|gb|EAZ80291.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1]
Length = 312
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 8/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +IGTR S LAL A+ L+ I+ + TKGD+I + ++ +IG
Sbjct: 1 MS-KLIKIGTRGSKLALWQAYYVEELLVKA----GLKAEIVIIDTKGDQILDVSIAKIGS 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLK 119
KG+FT+E+E +L+ G ID AVHSAKDM + L +G +I A+ RE DV L
Sbjct: 56 KGVFTQELEDQLLDGRIDIAVHSAKDMQSNLPEGFEIIAFTERETENDVLASHKKDIDLS 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +GTSS RR A L + + ++ RG ++TR+ K+ A+LLAYAG+ R+
Sbjct: 116 GASKPLTLGTSSTRRVATLKHFYPHVKTVEVRGNLQTRIRKMEEGLCDALLLAYAGVHRM 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV--KVINHEDTWDSVNCERAFL 237
+++I + L++ +F P+ GQG++ IE + NH +T + ERA+L
Sbjct: 176 GYDEMIAQKLDLNEFTPAVGQGSVAIEVAEKLDPEVKKQIIDACNHTETSLKLRAERAYL 235
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C + A +G + G +++ DG + +G+ D IG+ A+ +
Sbjct: 236 RVLEGGCSIPVFALATMEGEEIKLKGGIVSLDGSERISLLVSGSASDPEKIGKQLAKEVF 295
Query: 298 FISNKNVFN 306
K + +
Sbjct: 296 AAGGKVILD 304
>gi|319400986|gb|EFV89205.1| porphobilinogen deaminase [Staphylococcus epidermidis FRI909]
Length = 308
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 174/305 (57%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+
Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELS 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+D
Sbjct: 179 DNIVTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLTKVHNHDVAQCVTAERTFLSEMD 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++
Sbjct: 239 GSCQVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLKKQG 296
Query: 301 NKNVF 305
++
Sbjct: 297 AYDII 301
>gi|329724698|gb|EGG61204.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU144]
Length = 308
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 173/305 (56%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+
Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELS 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRIGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+D
Sbjct: 179 DNIVTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMD 238
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++
Sbjct: 239 GSCQVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLKKQG 296
Query: 301 NKNVF 305
++
Sbjct: 297 AYDII 301
>gi|148234672|ref|NP_001090881.1| porphobilinogen deaminase [Sus scrofa]
gi|112980813|gb|ABI29188.1| hydroxymethylbilane synthase [Sus scrofa]
Length = 361
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE D + H ++L
Sbjct: 75 SLFTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRECPYDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + +G + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLNGAESMQETMQATIHVPAQHEDGPEDDPQ 314
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 315 LVGITARNIPREAQLAAENLGISLATLLLNKGAKNILD 352
>gi|326409887|gb|ADZ66952.1| Porphobilinogen deaminase [Brucella melitensis M28]
Length = 277
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 129/273 (47%), Positives = 179/273 (65%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P I I+P+ST GDRI +R L+E+GGKGLFTEEIE+ L G ID AVHS KDMPT L +
Sbjct: 2 PEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTALPE 61
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL +S +L RED RD FI +A+ DL + +G+SSLRR+AL+ R R DI V+ +RG
Sbjct: 62 GLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRRQALIRRLRPDIEVVMYRGN 121
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
++TRL KL+ + LA AG++RL VI ++L+ FPP+PGQGAI IE+ + + +
Sbjct: 122 VDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDVLDPSVFPPAPGQGAIGIESRIGDER 181
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
L+ + H +T ++ CERAFL LDGSC++ IAG A +G L F G++L DG+
Sbjct: 182 IDVLLAPLAHRETQIALACERAFLGALDGSCRTPIAGLATVEGDRLSFRGMILTPDGRQA 241
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
HEV+ G DA +G DAA +R ++ + F+
Sbjct: 242 HEVTAEGVVSDAAALGTDAANRVRAMAGPHFFD 274
>gi|332527780|ref|ZP_08403819.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2]
gi|332112176|gb|EGJ12152.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2]
Length = 309
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 104/310 (33%), Positives = 153/310 (49%), Gaps = 9/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M I TR S LAL A R L + ++ ++TKGD+I +R L+++GG
Sbjct: 1 MSSNTI-IATRESRLALWQAEHVRDVLTARF---GLAVELLGMTTKGDQILDRALSKVGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L G AVHS KD+P L G ++A RED RD ++S+ ++L
Sbjct: 57 KGLFVKELETALEEGRAHLAVHSLKDVPMDLPPGFALAAIWEREDPRDAWVSNQYENLDA 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 117 LPQGACVGTSSLRRVVQLLARRPDLKIEPLRGNLDTRLRKLDEGGYDAIVLAAAGLKRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ + + P+ GQGA+ IE ++ + +EL+ H T+ + + ERA L
Sbjct: 177 LGARIRSLFDTSVMIPAAGQGALGIEIREDDTRLKELLAQTLHLPTFLACHAERAVSRSL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASD--GKIFHEVSRNGNRCD---AINIGRDAAQY 295
GSC +A F L + S + +V G D A +G AA
Sbjct: 237 GGSCSMPLAAFGQWNDGVLTIDAALGHSTELTRPLIKVRVTGTPTDEASARALGEHAAAL 296
Query: 296 IRFISNKNVF 305
+R +
Sbjct: 297 LREAGAGDYL 306
>gi|224083036|ref|XP_002187797.1| PREDICTED: hydroxymethylbilane synthase [Taeniopygia guttata]
Length = 371
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 106/335 (31%), Positives = 155/335 (46%), Gaps = 35/335 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + L +++ P + I+ +ST GD+I + L++IG K L
Sbjct: 29 RAIRVGTRRSQLARIQTDSVVTMLRELY--PDLHFEIVAMSTTGDKILDTALSKIGEKSL 86
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
FT+E+E L E+D VHS KD+PT L I A RE+ D + H K L
Sbjct: 87 FTKELENALERNEVDLVVHSLKDLPTSLPPDFTIGAVCKRENPLDAVVFHPKNCGKTLSL 146
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG+KR+
Sbjct: 147 LPEKSVIGTSSLRRAAQLKKKFPHLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRM 206
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I ++L+ ED + GQGA+ +E + + +V ++ DT ERAF+
Sbjct: 207 GWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKR 266
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 267 LEGGCSVPVAVNTLLKDGQLYLTGAVYSLDGSDSLKETMQTGVSYPHQNEDGPNDDVQHV 326
Query: 285 --------------AINIGRDAAQYIRFISNKNVF 305
A N+G + A + K++
Sbjct: 327 GITAKNVPGQAQEAAENLGVELASLLLSKGAKHIL 361
>gi|94498044|ref|ZP_01304607.1| porphobilinogen deaminase [Sphingomonas sp. SKA58]
gi|94422479|gb|EAT07517.1| porphobilinogen deaminase [Sphingomonas sp. SKA58]
Length = 313
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 117/292 (40%), Positives = 160/292 (54%), Gaps = 6/292 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR SPLALA A T +L+ H I I+ + T GDRI +R L +IGGK L
Sbjct: 11 RPLRLGTRGSPLALAQARLTAQALIAAHGWSADAIEIVTVQTSGDRIQDRALADIGGKAL 70
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+T+E+++ L++GE D +VHS KD+ T I+A LPR D RD I A S L
Sbjct: 71 WTKELDRALVAGETDLSVHSMKDVETVRHDIFHIAAMLPRADPRDKLI--GAASFDALPP 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ ++GTSS RR A + R R D ++ FRG + TRL KL + HA LLA AG+ RL +
Sbjct: 129 NPIVGTSSPRRGAQVKRLRPDATITLFRGNVATRLAKLAAGEVHATLLAAAGLDRLDQGN 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V I+ ++ P+P QGA+ IE N E V INH DT+D+V ERA L L G+
Sbjct: 189 VGT-IIPVDTMLPAPSQGAVGIEILAGNAPVIEAVAAINHRDTFDTVMMERAVLRGLGGT 247
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDA 292
C S IA A G L +++ DG+ + G+ +GR
Sbjct: 248 CHSPIAALALVDGDDLMLRAEIISPDGQETVSENLRLARGDLDAGEALGRAL 299
>gi|187929644|ref|YP_001900131.1| porphobilinogen deaminase [Ralstonia pickettii 12J]
gi|309781590|ref|ZP_07676324.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA]
gi|187726534|gb|ACD27699.1| porphobilinogen deaminase [Ralstonia pickettii 12J]
gi|308919565|gb|EFP65228.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA]
Length = 338
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 160/305 (52%), Gaps = 6/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 25 KLVIASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 82
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G +SA L RED RD FIS+ L L
Sbjct: 83 VKELEVALAEGRADLAVHSLKDVPMELPEGFALSAILEREDPRDAFISNDYADLASLPAG 142
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 143 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLVDR 202
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E+ P+ GQGA+ IE + + + ++ E T +V ERA L GSC
Sbjct: 203 IRSTIAPEESLPAAGQGALGIEIRADRADVRACLAPLHDEPTALAVTAERAVSRILGGSC 262
Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFIS 300
+ +A FA G TL V + DG +A +G AQ +
Sbjct: 263 QVPLASFAQWSDGGTLRLRAFVASQDGTRKLAADGEATPSTLAEADALGVRVAQQMLAGG 322
Query: 301 NKNVF 305
+++
Sbjct: 323 ARDIL 327
>gi|152980451|ref|YP_001352832.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille]
gi|151280528|gb|ABR88938.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille]
Length = 317
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 159/302 (52%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R S LA+ A R L ++ P +I I+ ++T+GD+I +RTL+++GGKGL
Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLAILY--PQCSIEILGMTTRGDQILDRTLSKVGGKGL 64
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E + D AVHS KD+ L G +++A L RED RD F+S+ +L+ L
Sbjct: 65 FVKELEVAIAEQRADLAVHSLKDVAMTLPDGFELAAVLEREDPRDAFVSNEFDTLEALPA 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+AL+ + + RG ++ RL KL+N + AI+LA AG+KRL
Sbjct: 125 GAIVGTSSLRRQALIAARYPQLVIRPLRGNLDRRLGKLDNGEYAAIILAAAGLKRLGLTA 184
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ L E P+PGQGA+ IE +E + +NH +T +V ER GS
Sbjct: 185 RIRSYLPPEQSLPAPGQGAMAIEILSERADLKEWLAPLNHTETALAVTAERTVSRNFGGS 244
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ +A FA G + I+ DG +G +GR A ++
Sbjct: 245 CQIPLAAFATIDGVNMRLRAIIATPDGSKMASADLSGAANAPEALGRQIADALQQQDAAA 304
Query: 304 VF 305
+
Sbjct: 305 IL 306
>gi|162218053|ref|YP_621689.2| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054]
Length = 334
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
++
Sbjct: 316 LDI 318
>gi|330824252|ref|YP_004387555.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601]
gi|329309624|gb|AEB84039.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601]
Length = 309
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 105/301 (34%), Positives = 156/301 (51%), Gaps = 8/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H++ ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 9 PIVIATRESQLALWQAEHVQALLAAR----GHSVSLLGMTTRGDQILDRTLSKVGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L
Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACIMEREDPRDAFVSPHHASLDELPQG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC
Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300
+A G TL +G+ R +A +G A +R
Sbjct: 245 SMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGSSRVATLDEADALGLAVAGRLRAAG 304
Query: 301 N 301
Sbjct: 305 A 305
>gi|170733765|ref|YP_001765712.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3]
gi|238058731|sp|B1JWR0|HEM3_BURCC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169817007|gb|ACA91590.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3]
Length = 334
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
++
Sbjct: 316 LDI 318
>gi|255262497|ref|ZP_05341839.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
gi|255104832|gb|EET47506.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
Length = 316
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 131/305 (42%), Positives = 176/305 (57%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP +IGTR SPLALA A ETR L +P I + T GDRI +R L EIGGKG
Sbjct: 9 TKPLKIGTRGSPLALAQAHETRERLAAAFDLPHEAFAIQVIQTTGDRIIDRPLKEIGGKG 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT EIE+ ++ G ID AVHS KDMPT GL + YLPRED+RD FI+ +L DL
Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPTLQPDGLLLDTYLPREDVRDAFIALDGGTLADLP 128
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
V+GTSSLRR+A L R D+ V++FRG ++TRL KL + A A LA AG+ RLK +
Sbjct: 129 DGGVVGTSSLRRQAQLRLRRPDLQVVEFRGNLQTRLRKLGDKVADATFLAMAGLNRLKMD 188
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + + +E+ P+ QGAI IE N+ +A +++ I+ T ++ ERAFL LDG
Sbjct: 189 DVTRTPIEVEEMLPAVAQGAIGIERRANDLRAADMLAAIHDRLTGQRLSAERAFLQALDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
SC++ IA A G+++ G VL DG D G+ A + + +
Sbjct: 249 SCETPIAALAELDGTSMRLRGEVLRPDGSEAIGDDVTILIEDGAAAGQAMAARLLANAGE 308
Query: 303 NVFNF 307
F++
Sbjct: 309 GFFDW 313
>gi|319763492|ref|YP_004127429.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
gi|317118053|gb|ADV00542.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
Length = 309
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 105/301 (34%), Positives = 156/301 (51%), Gaps = 8/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H++ ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 9 PIVIATRESQLALWQAEHVQALLAAR----GHSVSLLGMTTRGDQILDRTLSKVGGKGLF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L
Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACVMEREDPRDAFVSPHHASLDELPQG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL +
Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC
Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300
+A G TL +G+ R +A +G A +R
Sbjct: 245 SMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGSSRVATLDEADALGLAVAGRLRAAG 304
Query: 301 N 301
Sbjct: 305 A 305
>gi|115352519|ref|YP_774358.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD]
gi|122322497|sp|Q0BCU9|HEM3_BURCM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115282507|gb|ABI88024.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD]
Length = 328
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 131 AVVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 191 IRTLIDVEDSPPAAGQGALGIEIATHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DG+ G DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGA 310
Query: 302 KNVFN 306
++ N
Sbjct: 311 LDIVN 315
>gi|78777061|ref|YP_393376.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251]
gi|123727562|sp|Q30S90|HEM3_SULDN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78497601|gb|ABB44141.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251]
Length = 313
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 162/306 (52%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL + ++ L + + P + + + T GDRI ++ L++IGGKG
Sbjct: 1 MKKLVIATRGSQLALWQSNHIKAILQEQN--PGLEVELNVIVTTGDRIQDKALSKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E+ ++ GE AVHS KD+PT + GL ++A RED RD +S ++ L
Sbjct: 59 LFLKELEEAMLQGEAQIAVHSLKDVPTVMPDGLILAAITEREDSRDALLSEKYANIDALP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180
++V+GTSSLRR+ + + R D+ + D RG ++TR+ KL + AI+LA AGI RL
Sbjct: 119 KNAVVGTSSLRRRMQIQKLRPDLIIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLSLL 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++E+ PS GQGA+ IE + + +V + E + ER+F+ EL
Sbjct: 179 DAVKHVYPISLEEMVPSMGQGALGIEAVNDA-EVLRIVAGLEDEYSRIETTIERSFVDEL 237
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ I A T+ ++ +G+ S+ ++ D NIGR+ A
Sbjct: 238 EGGCQVPIGVNASVLDDGTISIRAVLGLPNGEEMLSDSKITSKKDYENIGREIAAEFIEK 297
Query: 300 SNKNVF 305
K +
Sbjct: 298 GAKELL 303
>gi|219848200|ref|YP_002462633.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485]
gi|219542459|gb|ACL24197.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485]
Length = 324
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 14/310 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LA + + L + ++ + ++T GDR+ + L+ +G KGLF +E
Sbjct: 6 LGTRGSALARTQSEWVANVLR--NTFADLSVELRIITTTGDRVLDVALSAVGDKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---ALH 124
+E+ L++G++D VHSAKDMPT GL +SA+ RED RDV + A DL
Sbjct: 64 LEQALLAGDVDLCVHSAKDMPTATPPGLMLSAFPVREDPRDVLVVRHADVGTDLATLPTG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSSLRR + L R D+ + D RG ++TRL KL +++ A++LA AG++RL
Sbjct: 124 ARIGTSSLRRASQLRYHRPDLHLNDVRGNVDTRLRKLASDQYDALILAAAGLRRLGLWDG 183
Query: 185 IK---------EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
L+ P+ QG + +ET ++ LV ++ + ERA
Sbjct: 184 TPGASIGAALVYPLDPSVMLPAVAQGILAVETRTDDETTNRLVAALDDSAARTAALAERA 243
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
FL L+G C+ +A A + L+F G+V A DG + G+ +G A+
Sbjct: 244 FLRRLEGGCQIPVAAHAVLTEAGLHFRGMVGALDGSTLVFAEQVGDPAQPEAVGIAVAEA 303
Query: 296 IRFISNKNVF 305
+ + +
Sbjct: 304 VLAQGGEAIL 313
>gi|149921672|ref|ZP_01910121.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1]
gi|149817516|gb|EDM76986.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1]
Length = 322
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 4/307 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LAL A R L+ + ++ + TKGDR+T+R L ++GG GL
Sbjct: 9 RKLRLGTRGSALALWQANMIRDRLLAAWGAQGLEVELVRVVTKGDRVTDRPLNQVGGMGL 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--DL 121
F + +E KL++GEID AVHS KDMP L +GL +++ R D RD F++ + + L
Sbjct: 69 FVKGLEDKLLAGEIDFAVHSMKDMPGTLPEGLTLASTPERADPRDAFLAAPGRDVTLATL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S +GTSSLRR AL R + ++ RG + TR+ K+ + A+LLA AG+ RL K
Sbjct: 129 PAGSRLGTSSLRRGALAKRINPGLEIVPIRGNVPTRMGKIAEGEVDAVLLAAAGLDRLGK 188
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I E L+ + F P+ QG + IE + L + + H T ER++LA L
Sbjct: 189 GEAITERLDPDAFMPAACQGVLAIELRAADTDIAALFEPLGHGPTSIVAAAERSYLATLQ 248
Query: 242 GSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C+ +A A G + G+V+ DG + G DA +G A+ +
Sbjct: 249 GGCQVPLACHARLSEDGRRVRVEGLVVEPDGSTVYASEAEGPVADAAQLGAGVAREVLAA 308
Query: 300 SNKNVFN 306
+ V +
Sbjct: 309 GGQGVID 315
>gi|296162267|ref|ZP_06845062.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1]
gi|295887534|gb|EFG67357.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1]
Length = 332
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 164/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G +S + RED RD +S+T SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMALPEGFALSTIMEREDPRDALVSNTYDSLAALPEG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGER 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A +A L+ GIV DG+ + AI +G++ A +
Sbjct: 250 EVPLAAYATWHDGALHLRGIVATPDGQRVLSAQASAPATSVEQAIALGQEVASALEQQGA 309
Query: 302 KNV 304
+
Sbjct: 310 MEI 312
>gi|331270186|ref|YP_004396678.1| porphobilinogen deaminase [Clostridium botulinum BKT015925]
gi|329126736|gb|AEB76681.1| porphobilinogen deaminase [Clostridium botulinum BKT015925]
Length = 300
Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 6/299 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL + + H P N I +STKGDRI + L +IGGKGLF
Sbjct: 2 KIIVGSRGSKLALTQTNWVIDKIKENH--PQVNFEIKIISTKGDRIQHMPLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123
+EIE++LI+G+ID AVHS KDM T + + L+ S RED RDV I + +S+ +L
Sbjct: 60 VQEIEEQLINGQIDLAVHSMKDMSTDIPEELKFSYVPVREDYRDVLILNKKYKSIDELPK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGT S RRK LL +R+D+ ++ RG ++TR+ K+ I+LA AGIKRL E
Sbjct: 120 GAKIGTGSKRRKYQLLDYRNDLKIVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLED 179
Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I L + PSP QG + +E + ++K I E + ERAFL +
Sbjct: 180 KIDYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEDEISTIQAEAERAFLKGV 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C I T+ G++ D + G+ +A IG + A+ +
Sbjct: 240 NGGCHVPIGALCSINKDTVEVTGLLGKEDASKIVRKTLVGSIDEAEYIGYELAKIVLKE 298
>gi|241663752|ref|YP_002982112.1| porphobilinogen deaminase [Ralstonia pickettii 12D]
gi|240865779|gb|ACS63440.1| porphobilinogen deaminase [Ralstonia pickettii 12D]
Length = 338
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 6/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 25 KLVIASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 82
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G +S L RED RD F+S+ L L
Sbjct: 83 VKELEVALAEGRADLAVHSLKDVPMQLPEGFALSTILEREDPRDAFVSNDYADLASLPAG 142
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG++RL
Sbjct: 143 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLRRLGLADR 202
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E+ P+ GQGA+ IE + + + + ++ T +V ERA L GSC
Sbjct: 203 IRSTIAPEESLPAAGQGALGIEIRADREEVRACLAPLHDAPTALAVTAERAVSRILGGSC 262
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFIS 300
+ +A FA G TL V + DG DA +G AQ +
Sbjct: 263 QVPLAAFAQWSGAGTLRLRAFVASQDGTRKLAADGEATPSTLADADALGVRVAQQMLAGG 322
Query: 301 NKNVF 305
+++
Sbjct: 323 ARDIL 327
>gi|118101810|ref|XP_417846.2| PREDICTED: similar to Hydroxymethylbilane synthase [Gallus gallus]
Length = 358
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 106/335 (31%), Positives = 152/335 (45%), Gaps = 35/335 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA L + + P I+ +ST GD+I + L++IG K L
Sbjct: 16 RAIRVGTRRSQLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKSL 73
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
FT+E+E L E+D VHS KD+PT L G I A RE+ D + H K L
Sbjct: 74 FTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSV 133
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG+KR+
Sbjct: 134 LPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRM 193
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I ++L+ ED + GQGA+ +E + + +V + +T ERAF+
Sbjct: 194 GWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSALQDGETVLCCIAERAFMKR 253
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284
L+G C +A K LY G V + DG + + +G D
Sbjct: 254 LEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSDSLKETMQTSVNYPHRNEDGPNDDVQHV 313
Query: 285 --------------AINIGRDAAQYIRFISNKNVF 305
A N+G + A + K++
Sbjct: 314 GITAKNVPGQAQEAAENLGIELASLLLSKGAKHIL 348
>gi|73540406|ref|YP_294926.1| porphobilinogen deaminase [Ralstonia eutropha JMP134]
gi|72117819|gb|AAZ60082.1| hydroxymethylbilane synthase [Ralstonia eutropha JMP134]
Length = 334
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 20 KLVIASRESRLAMWQAEYVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E + G D AVHS KD+P +L G ++A + RED RD +S T SL+++
Sbjct: 78 VKELEFAMAEGRADLAVHSLKDVPMELPDGFALTAVMEREDPRDALVSSTFASLEEMPAG 137
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL
Sbjct: 138 TVVGTSSLRREAALRARYPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDR 197
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE P + +NH+ T +V ERA L GSC
Sbjct: 198 IRALIAPEASLPAAGQGALGIEILSTRPDVAAWLSPLNHQPTALAVTAERAVSRMLGGSC 257
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFISN 301
+ +A A G L V DG S G D A +G AA+ +
Sbjct: 258 QVPLAAHARWVGDQLRLDAFVAMPDGSRQTRASAAGLVVDAAAAEALGASAARDLLSQGA 317
Query: 302 KNVF 305
+
Sbjct: 318 AEIL 321
>gi|182677009|ref|YP_001831155.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632892|gb|ACB93666.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 337
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 132/305 (43%), Positives = 171/305 (56%), Gaps = 5/305 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLALA A E L H + I + T GD I +R L+ GGKGLFT
Sbjct: 19 LRLGTRGSPLALAQAHELADRLARAHGFAKEAVAITIIRTSGDMIQDRPLSLAGGKGLFT 78
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ LI G +D AVHSAKD+PT L + L I+ YLPRED+RDV+IS A +DL S
Sbjct: 79 KELDQALIEGMVDLAVHSAKDLPTILPEDLIIAGYLPREDVRDVWISPKAGHPRDLPPGS 138
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT+SLRR ALL R R D+ V RG +ETRL KL + A LLA AG++RL
Sbjct: 139 VVGTASLRRGALLKRLRPDLEVRLLRGNVETRLAKLAAGEVDATLLALAGLRRLGLADKA 198
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L IEDF P+ GQGAI I T ++ L+ I T ++ ER FL LDGSCK
Sbjct: 199 TQVLAIEDFLPAAGQGAIGITTRRDDAATLALLAPILDPATHVALAAERGFLTVLDGSCK 258
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AINIGRDAAQYIRFIS 300
+ I A + + GIVL DG + E +G A +G AA+ I
Sbjct: 259 TPIGAHATVEHDQVTLRGIVLRPDGSEWFEACESGPLESGSLEAARELGETAARAILARL 318
Query: 301 NKNVF 305
+ F
Sbjct: 319 PEGFF 323
>gi|87117998|gb|ABD20306.1| HemC [Shigella dysenteriae]
gi|87118030|gb|ABD20322.1| HemC [Shigella flexneri]
gi|87118032|gb|ABD20323.1| HemC [Shigella flexneri]
Length = 272
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|198284968|ref|YP_002221289.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666388|ref|YP_002427653.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|226740625|sp|B7JBH8|HEM3_ACIF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740626|sp|B5ERN6|HEM3_ACIF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|198249489|gb|ACH85082.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518601|gb|ACK79187.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 306
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 108/284 (38%), Positives = 158/284 (55%), Gaps = 4/284 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLA+ A R++L+ +H P + II ++T GD + + L +GGKGLF
Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLH--PGMAVEIITMTTSGDVLLDAPLHALGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L +D AVHS KD+P GL+I A + RED+RD F+S+T L +
Sbjct: 63 KEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR+A LL + V D RG + TRL +L+ AI+LA AG+KRL I
Sbjct: 123 RVGSSSLRRRAQLLERYPHLRVEDLRGNVATRLRRLDEGHYDAIILAAAGLKRLGLPDRI 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L+I+ P+ GQGAI IE ++ + +EL+ + DT + V ER+ L G C+
Sbjct: 183 THLLDIDRSLPAVGQGAIGIEARSDDRRTRELLAPLADADTQNCVLAERSMNQVLGGDCR 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+A A +G + G+V DG+ G+ D + +G
Sbjct: 243 LPVAALARWQGPQMLLRGLVATPDGRRVLHAEAKGS--DPVALG 284
>gi|314933825|ref|ZP_07841190.1| hydroxymethylbilane synthase [Staphylococcus caprae C87]
gi|313653975|gb|EFS17732.1| hydroxymethylbilane synthase [Staphylococcus caprae C87]
Length = 309
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIYKLKKV--DPDLDIEIKEIVTKGDQIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L
Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELT 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+
Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+D
Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMD 238
Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A G + F G+++ DGK +E + G D + +G++ ++ ++
Sbjct: 239 GSCQVPIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|118444575|ref|YP_878763.1| porphobilinogen deaminase [Clostridium novyi NT]
gi|189028087|sp|A0Q2B1|HEM3_CLONN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118135031|gb|ABK62075.1| porphobilinogen deaminase [Clostridium novyi NT]
Length = 300
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 157/299 (52%), Gaps = 6/299 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL + + P + +STKGDRI + L +IG KGLF
Sbjct: 2 KIVVGSRGSKLALTQTNWVIDKIKQKY--PQIQFEVKIISTKGDRIQHIALDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-AL 123
+EIE++LISG+ID AVHS KDM T++ + L+ S RED RDV I + + D +
Sbjct: 60 VKEIEEQLISGDIDMAVHSMKDMSTEMPEELKFSYVPKREDYRDVLILNKKYNSIDELPM 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGT S RRK LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL ++
Sbjct: 120 NAKIGTGSKRRKYQLLQYRDDLNIVPIRGNVETRINKIEMENLHGVVLASAGIKRLNIQE 179
Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ LN + PSP QG + +E + +E++K I +++ ERAFL +
Sbjct: 180 KLDYNIFYLNEDIMLPSPAQGILALEIRKDREDLEEILKSIEDKNSSIQAVAERAFLKGV 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C I + G++ DG S G DA IG + A+ +
Sbjct: 240 NGGCHVPIGAICNINKDNVELTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIVLKE 298
>gi|87118000|gb|ABD20307.1| HemC [Shigella dysenteriae]
gi|87118002|gb|ABD20308.1| HemC [Shigella dysenteriae]
gi|87118004|gb|ABD20309.1| HemC [Shigella dysenteriae]
Length = 272
Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 98/267 (36%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPDISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|258424087|ref|ZP_05686969.1| porphobilinogen deaminase [Staphylococcus aureus A9635]
gi|257845708|gb|EEV69740.1| porphobilinogen deaminase [Staphylococcus aureus A9635]
Length = 308
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L +L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|254247511|ref|ZP_04940832.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184]
gi|124872287|gb|EAY64003.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184]
Length = 334
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLASLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
++
Sbjct: 316 LDI 318
>gi|66773161|ref|NP_001019559.1| hydroxymethylbilane synthase, b [Danio rerio]
gi|63101908|gb|AAH95373.1| Hydroxymethylbilane synthase, b [Danio rerio]
Length = 360
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 114/337 (33%), Positives = 158/337 (46%), Gaps = 37/337 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA L +++ P I+ +ST GD+I + L++IG K L
Sbjct: 16 RVIRVGTRKSQLARIQTDSVVEKLKELY--PDVLFEIVAMSTTGDKILDTALSKIGEKSL 73
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L
Sbjct: 74 FTKELENALEKNEVDLVVHSLKDLPTVLPAGFTIGAVLKRENPHDAVVLHPKNKGKRLDS 133
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179
L+ SVIGTSSLRR A L + + D RG + TRL KL+ NN AI+LA AG+KR+
Sbjct: 134 LSNKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDENNDFSAIILAAAGLKRM 193
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I +IL ED + GQGA+ +E + E+V V+N DT S ERAFL
Sbjct: 194 GWENRISQILGPEDCMYAVGQGALAVEVRARDLDILEMVSVLNDSDTALSCIAERAFLKH 253
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--------------------- 278
L+G C +A + K S LY G V + DG + +
Sbjct: 254 LEGGCSVPVAVHSEVKNSQLYLTGAVYSLDGSDSLKETMQTSFNPDTQAEEQEKVDEKVQ 313
Query: 279 ----------NGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A+ +G D + K +
Sbjct: 314 RVGITALKVAEAAQDAAMKLGVDLGNLLLSKGAKEIL 350
>gi|221124344|ref|XP_002162635.1| PREDICTED: similar to hydroxymethylbilane synthase a [Hydra
magnipapillata]
Length = 450
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 103/296 (34%), Positives = 161/296 (54%), Gaps = 8/296 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F I TR S LAL A ++ L ++ ++ ++TKGD+I +R+L+++GGKGLF
Sbjct: 150 TFTIATRESRLALWQAEHVKALLEQ----SGASVSLLGMTTKGDQILDRSLSKVGGKGLF 205
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL
Sbjct: 206 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKG 265
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E
Sbjct: 266 AVVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESR 325
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC
Sbjct: 326 IRAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSC 385
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNG---NRCDAINIGRDAAQYI 296
+A +A G L+ ++G + +G + +A +G A+ +
Sbjct: 386 SMPLAAYATISGDELHIRAAWGDAEGIQPVVYARASGLAKDAPEATALGEQVARDL 441
>gi|87117964|gb|ABD20289.1| HemC [Shigella boydii]
gi|87117966|gb|ABD20290.1| HemC [Shigella boydii]
gi|87117982|gb|ABD20298.1| HemC [Shigella boydii]
gi|87117986|gb|ABD20300.1| HemC [Shigella boydii]
gi|87117990|gb|ABD20302.1| HemC [Shigella boydii]
gi|87117994|gb|ABD20304.1| HemC [Shigella boydii]
gi|87118012|gb|ABD20313.1| HemC [Shigella dysenteriae]
Length = 272
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|87117974|gb|ABD20294.1| HemC [Shigella boydii]
gi|87117976|gb|ABD20295.1| HemC [Shigella boydii]
gi|87117978|gb|ABD20296.1| HemC [Shigella boydii]
gi|87117980|gb|ABD20297.1| HemC [Shigella boydii]
gi|87117984|gb|ABD20299.1| HemC [Shigella boydii]
gi|87117988|gb|ABD20301.1| HemC [Shigella boydii]
gi|87117992|gb|ABD20303.1| HemC [Shigella boydii]
gi|87117996|gb|ABD20305.1| HemC [Shigella boydii]
gi|87118006|gb|ABD20310.1| HemC [Shigella dysenteriae]
gi|87118010|gb|ABD20312.1| HemC [Shigella dysenteriae]
gi|87118016|gb|ABD20315.1| HemC [Shigella dysenteriae]
gi|87118020|gb|ABD20317.1| HemC [Shigella dysenteriae]
gi|87118036|gb|ABD20325.1| HemC [Shigella flexneri]
gi|87118042|gb|ABD20328.1| HemC [Escherichia coli]
gi|87118044|gb|ABD20329.1| HemC [Escherichia coli]
Length = 272
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|291277466|ref|YP_003517238.1| porphobilinogen deaminase [Helicobacter mustelae 12198]
gi|290964660|emb|CBG40515.1| porphobilinogen deaminase [Helicobacter mustelae 12198]
Length = 315
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 105/311 (33%), Positives = 155/311 (49%), Gaps = 9/311 (2%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M K + IGTR S LAL A L + + T+GDR+ + L +I
Sbjct: 1 MSKQNRQIIIGTRGSALALWQAEYIAMRLKKEL---GIESRLQIVKTQGDRMLDVPLAKI 57
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLFT+E+EK L+ +ID AVHS KD+P + ++GL ++ RED+RD F+S S+
Sbjct: 58 GGKGLFTKELEKLLLQEKIDIAVHSLKDVPVEFVEGLDLACITKREDVRDCFLSVRYASI 117
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL + +GT+SLRR L R D+ RG ++TRL +L + + AI+LA AG+ R
Sbjct: 118 LDLPPGARVGTTSLRRSMQLKILRKDLDTQSLRGNVQTRLKRLFDGEFDAIILAQAGLNR 177
Query: 179 LKKEKVIKEILNI---EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
L ++ L E+ P+ GQGA+ IE L++ +N E T N ER
Sbjct: 178 LGIDQQKVPFLKPFSTEELIPAMGQGALGIEAR-EGDGIFSLLQGLNDEATAICTNAERT 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
F+ LDG C+ I A C + I+ DG S +G+ D+I + + A+
Sbjct: 237 FIRVLDGGCQVPIGVHAQCNNQDFVIHAILGLPDGSKVLRDSISGSTKDSILLAENLAER 296
Query: 296 IRFISNKNVFN 306
+
Sbjct: 297 FLSQGALEILE 307
>gi|206560969|ref|YP_002231734.1| porphobilinogen deaminase [Burkholderia cenocepacia J2315]
gi|238058732|sp|B4E8C4|HEM3_BURCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|198037011|emb|CAR52932.1| putative porphobilinogen deaminase protein [Burkholderia
cenocepacia J2315]
Length = 334
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFALAAIMEREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPRTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVMTVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
++
Sbjct: 316 LDI 318
>gi|238028332|ref|YP_002912563.1| Porphobilinogen deaminase [Burkholderia glumae BGR1]
gi|237877526|gb|ACR29859.1| Porphobilinogen deaminase [Burkholderia glumae BGR1]
Length = 322
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 158/305 (51%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL +L
Sbjct: 71 VKELETALADGRADLAVHSLKDVPMSLPEGFALTAVMRREDPRDAFVSNDYASLDELPTG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S++GTSSLRR+A+L DI V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 131 SIVGTSSLRREAMLRARYLDIDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ +E PP+ GQGA+ IE + + ++ T + ER L GSC
Sbjct: 191 IRSLIEVEASPPAAGQGALGIEIAAARAELARWLAPLHDPATALACEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A G L G V G A+ +GR A +
Sbjct: 251 EVPLAAHAVWDGDVLQLTGRVSNPSGTRVLNARARAAVSTPDAALALGRQVADELARQGA 310
Query: 302 KNVFN 306
+
Sbjct: 311 FEIVE 315
>gi|82751259|ref|YP_417000.1| porphobilinogen deaminase [Staphylococcus aureus RF122]
gi|123727415|sp|Q2YTB9|HEM3_STAAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|82656790|emb|CAI81219.1| Porphobilinogen deaminase [Staphylococcus aureus RF122]
Length = 308
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+I+ P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDIDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|187923070|ref|YP_001894712.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN]
gi|238058734|sp|B2T1D1|HEM3_BURPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|187714264|gb|ACD15488.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN]
Length = 342
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 166/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L
Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL+KL+ AI+LA AG+KRL +
Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGER 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC
Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSC 249
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A +A + L+ GIV DG+ + A+ +G++ A +
Sbjct: 250 EVPLAAYATWRDGALHLRGIVATPDGQRVLSAQASAPAPSVERAVALGQEVASALEQQGA 309
Query: 302 KNV 304
++
Sbjct: 310 MDI 312
>gi|87117968|gb|ABD20291.1| HemC [Shigella boydii]
Length = 272
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 100/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
I TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 IGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|256827644|ref|YP_003151603.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641]
gi|256583787|gb|ACU94921.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641]
Length = 313
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 153/312 (49%), Gaps = 8/312 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K IGTR S LAL A + R+ + P + + + TKGD+I + L++IG
Sbjct: 1 MTDKTITIGTRGSKLALWQAEKVRALIQA--TFPEVHCAVKVIRTKGDKILDVALSKIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLK 119
KGLFT+E+E+ L+ GE+D VHS KDMPT L KGL I+ R DV ++ +L
Sbjct: 59 KGLFTKELERCLLEGEVDVCVHSMKDMPTVLPKGLFIAGVTERAYPNDVIVASAKGLTLS 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + + T SLRR A L R R D++ + RG I+TR+ ++ + A +LA AG+ RL
Sbjct: 119 DLPAGARVATGSLRRVAQLARLRPDVTACEIRGNIDTRIGRVLAGEFDAAILAAAGLYRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E+ I ++ E+ P+ GQGAI +E ++ + L I+H+ T +V ER +
Sbjct: 179 GLEEQISSLIPTEEMIPAVGQGAIALEARADDREVAHLCTAISHQPTLRAVEAERYIMRA 238
Query: 240 LDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L+G C+ + +A ++ V DG F + AI
Sbjct: 239 LEGGCQVPMGAYATESEDEQGRRMIHIDAFVATLDGTRFLRAQASTPVDQAIEAAGKIVD 298
Query: 295 YIRFISNKNVFN 306
+ +
Sbjct: 299 DLVSQGATEILE 310
>gi|87118008|gb|ABD20311.1| HemC [Shigella dysenteriae]
gi|87118014|gb|ABD20314.1| HemC [Shigella dysenteriae]
Length = 272
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 146/267 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE + + +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLGDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|118594154|ref|ZP_01551501.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181]
gi|118439932|gb|EAV46559.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181]
Length = 305
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 160/302 (52%), Gaps = 2/302 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K I +R SPLA+ A ++ L +++ P +I I T+GD I +++L IGGKGL
Sbjct: 3 KKITIASRESPLAMWQAEHIKTQLNNLY--PYLSIYIKGFKTQGDIILDQSLATIGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ L+ E D AVHS KD+P + + Q+SA RED RD FIS +SL D+
Sbjct: 61 FIKELEQALLKKEADLAVHSMKDLPMDIYEDFQLSAITAREDPRDAFISLKYKSLDDMPD 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR++ + + + RG ++TRL+KL + AI+LA AG+ RL +
Sbjct: 121 GAIVGTSSLRRQSQIKAKYPSLIIEPLRGNLQTRLSKLKKGQYGAIILAAAGLIRLDLQD 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I ++ P+ GQGA+ IE +N + L+K +N +DT V ER L GS
Sbjct: 181 QITMYIDKNVSIPAVGQGALGIEILSSNTELDLLLKPLNDDDTSRCVLAERMVSRSLAGS 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + A+ + + G V + +G+ G + D +G +Q + K
Sbjct: 241 CTVPLGAHAFINKNAMVINGFVASPNGEKIIHAEMKGVKADFYKLGESLSQLLIDQGAKT 300
Query: 304 VF 305
+
Sbjct: 301 LL 302
>gi|66809519|ref|XP_638482.1| porphobilinogen deaminase [Dictyostelium discoideum AX4]
gi|74854142|sp|Q54P93|HEM3_DICDI RecName: Full=Porphobilinogen deaminase; AltName: Full=Heme
biosynthesis protein C; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS
gi|60467077|gb|EAL65118.1| porphobilinogen deaminase [Dictyostelium discoideum AX4]
Length = 325
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 14/316 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ IG+R S LA+ R + +++ P + I + T GD++ + +L++IG K
Sbjct: 6 KRDKVIIGSRKSQLAMLQTEWVRDRIQELN--PGIIVEIKTMDTTGDKVLDVSLSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E +++G ID AVHS KD+PTKL GL++ A R + D FI++ + K+
Sbjct: 64 GLFTKELEDMMLNGTIDLAVHSLKDIPTKLPDGLKLGAITKRYNTSDAFIANAKKHGKNC 123
Query: 122 -----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174
++IG+SSLRR A L + + D RG + TR KL ++N ++LA A
Sbjct: 124 KLSELPQGAMIGSSSLRRVAQLKKAYPHLQFKDIRGNLNTRFKKLEDDSNGYDGMILAVA 183
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++R++ I EI+ + GQG++ IE + Q ++ + H ++ ER
Sbjct: 184 GLERMELTDHISEIIPDSISLYAVGQGSLGIECKDGDDFIQSILNPLIHRESMYCCEAER 243
Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
+ L +L+G C I TL IVL DG + E G +G
Sbjct: 244 SMLRDLEGGCHVPIGVVTKLHNQSQPDETLEINAIVLNLDGSKYIESKIIGPSIQYYQLG 303
Query: 290 RDAAQYIRFISNKNVF 305
+ AQ + +K++
Sbjct: 304 KSIAQDLINKGSKDIL 319
>gi|300690776|ref|YP_003751771.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum PSI07]
gi|299077836|emb|CBJ50474.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum PSI07]
Length = 334
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 158/304 (51%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 22 LVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFV 79
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L G + L RED RD F+S+ L L +
Sbjct: 80 KELEVALAEGRADLAVHSLKDVPMELPAGFALPTILEREDPRDAFVSNHYADLAALPAGA 139
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + I
Sbjct: 140 VVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERI 199
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ E P+ GQGA+ IE + P Q + ++H T +V ERA L GSC+
Sbjct: 200 RAVIAPEASLPAAGQGALGIEIRADRPDVQAWLAPLHHAPTALAVTAERAVSRRLGGSCQ 259
Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISN 301
+A FA L V + DG+ +A +G AQ +
Sbjct: 260 VPLAAFAQWTDDGALRLRAFVASQDGRRKLAAEGETTPATLAEAEALGARVAQQMLDGGA 319
Query: 302 KNVF 305
++
Sbjct: 320 HDIL 323
>gi|57650542|ref|YP_186555.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL]
gi|87160322|ref|YP_494312.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195475|ref|YP_500279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221776|ref|YP_001332598.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509889|ref|YP_001575548.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142579|ref|ZP_03567072.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253732321|ref|ZP_04866486.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253734545|ref|ZP_04868710.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|258451815|ref|ZP_05699837.1| porphobilinogen deaminase [Staphylococcus aureus A5948]
gi|262048646|ref|ZP_06021529.1| porphobilinogen deaminase [Staphylococcus aureus D30]
gi|262052244|ref|ZP_06024449.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3]
gi|282920211|ref|ZP_06327936.1| porphobilinogen deaminase [Staphylococcus aureus A9765]
gi|284024719|ref|ZP_06379117.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 132]
gi|294848692|ref|ZP_06789438.1| porphobilinogen deaminase [Staphylococcus aureus A9754]
gi|304380738|ref|ZP_07363407.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|11386773|sp|O34090|HEM3_STAA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71152114|sp|Q5HFA2|HEM3_STAAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123749605|sp|Q2FG66|HEM3_STAA3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|172048933|sp|A6QHK4|HEM3_STAAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028161|sp|A8Z2J1|HEM3_STAAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|2589181|gb|AAC45833.1| porphobilinogen deaminase [Staphylococcus aureus]
gi|57284728|gb|AAW36822.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL]
gi|87126296|gb|ABD20810.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203033|gb|ABD30843.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150374576|dbj|BAF67836.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160368698|gb|ABX29669.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253723959|gb|EES92688.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253727486|gb|EES96215.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257860527|gb|EEV83353.1| porphobilinogen deaminase [Staphylococcus aureus A5948]
gi|259159845|gb|EEW44884.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3]
gi|259163293|gb|EEW47852.1| porphobilinogen deaminase [Staphylococcus aureus D30]
gi|269941151|emb|CBI49538.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
TW20]
gi|282594559|gb|EFB99544.1| porphobilinogen deaminase [Staphylococcus aureus A9765]
gi|294824718|gb|EFG41141.1| porphobilinogen deaminase [Staphylococcus aureus A9754]
gi|302751497|gb|ADL65674.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340737|gb|EFM06668.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|315198635|gb|EFU28963.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140451|gb|EFW32305.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143989|gb|EFW35758.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314344|gb|AEB88757.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
T0131]
gi|329728357|gb|EGG64794.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21189]
gi|329733184|gb|EGG69521.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21193]
Length = 308
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQNEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|293374464|ref|ZP_06620786.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909]
gi|292646843|gb|EFF64831.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909]
Length = 301
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 3/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL L H P + + TKGD I + +L +IG KGLF
Sbjct: 3 VVVGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
EIE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL
Sbjct: 61 REIEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++
Sbjct: 121 AKIGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEM 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C
Sbjct: 181 ISSYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + +G L G+ + +G G I +G + AQ++
Sbjct: 241 HIPMGAYCELEGDKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFVLKE 295
>gi|302388903|ref|YP_003824724.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM
16646]
gi|302199531|gb|ADL07101.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM
16646]
Length = 299
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 105/293 (35%), Positives = 167/293 (56%), Gaps = 5/293 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+G+R S LAL L D + P ++ + T+GD++ + L++ GGKG+
Sbjct: 6 RIVRVGSRESRLALVQTEIVIRLLKD--RRPELEFEVVKIKTQGDKLLDVNLSDAGGKGV 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++G ID AVHS KD+P +L +GL I+A RED RDV IS + L +L
Sbjct: 64 FVKEIEEALLAGSIDLAVHSMKDVPYELPEGLCIAAVTEREDPRDVLISRDKRRLLNLRP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSSLRR L R D+ ++ RG + TR+ K+++ + ++LA AGIKRL E+
Sbjct: 124 GARIGTSSLRRSVQLKALRPDLDIVPVRGNVPTRIRKMDDLELDGLVLAAAGIKRLGLEE 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+I E E P+ GQGA+ +E + EL +++H+ T +V ER+F+ L GS
Sbjct: 184 LIAEYFPPEVIVPAVGQGALAVEAR-KDDDILELAGLVSHKATEVAVRAERSFMRALGGS 242
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C+ + FA +G+ + G+V +G + + +G +A IG A+ +
Sbjct: 243 CRVPLGAFARVEGTVVTLVGMV-EKNGS-VCKGTMSGKLKEAEEIGLRLAERL 293
>gi|289550573|ref|YP_003471477.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01]
gi|289180105|gb|ADC87350.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01]
Length = 310
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 171/305 (56%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L
Sbjct: 59 LFVKEIQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+
Sbjct: 119 DGSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+K ++++ D V ER FLA +D
Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDVELLALLKQVHNQQVADCVTAERTFLAAMD 238
Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A K + F G+++ DGK +E + +G + I +G + +
Sbjct: 239 GSCQVPIGGYAMNKPNGDIEFTGLIMTPDGKERYEHTESG--NNPIELGNKVSDVLIEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|315658068|ref|ZP_07910940.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590]
gi|315496397|gb|EFU84720.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590]
Length = 310
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 102/305 (33%), Positives = 169/305 (55%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L
Sbjct: 59 LFVKEIQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S++GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+
Sbjct: 119 DGSIVGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ ++++ D V ER FLA +D
Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDVELLALLNQVHNQQVADCVTAERTFLAAMD 238
Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A K + F G+++ DGK +E + G + I +G + +
Sbjct: 239 GSCQVPIGGYATNKTNGDIEFTGLIMTPDGKERYEHTEIG--NNPIELGNKVSDVLIEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|262163679|ref|ZP_06031420.1| porphobilinogen deaminase [Vibrio mimicus VM223]
gi|262027895|gb|EEY46559.1| porphobilinogen deaminase [Vibrio mimicus VM223]
Length = 271
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 97/264 (36%), Positives = 146/264 (55%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+T + DL +V+GT SLRR+ L R D+ + + RG + TRL+KL+
Sbjct: 61 REDPRDAFVSNTYAKIDDLPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL+ E I+ + E P+ GQGA+ IE +++ + +EL+ +N
Sbjct: 121 AGEYDAIILAAAGLKRLELESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H DT D V CERA L G C+ I +A G ++ +V DG G R
Sbjct: 181 HTDTADRVRCERAMNLTLQGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPR 240
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+A +G A+ + K +
Sbjct: 241 SEAEQLGITLAEQLLGQGAKEILE 264
>gi|87118018|gb|ABD20316.1| HemC [Shigella dysenteriae]
gi|87118046|gb|ABD20330.1| HemC [Escherichia coli]
Length = 272
Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats.
Identities = 98/267 (36%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G +A +G A+ +
Sbjct: 246 IRGERRGAPQNAEQMGISLAEELLNNG 272
>gi|253680789|ref|ZP_04861592.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873]
gi|253562638|gb|EES92084.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873]
Length = 300
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 107/298 (35%), Positives = 155/298 (52%), Gaps = 6/298 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G+R S LAL + + P N I +STKGDRI + L +IGGKGLF
Sbjct: 3 IVVGSRGSKLALTQTNWVIDKIKQNN--PQLNFEIKIISTKGDRIQHMLLDKIGGKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124
+EIE++LISG+ID AVHS KDM T + + L+ S RED RDV I + +S+ +L
Sbjct: 61 QEIEEQLISGQIDLAVHSMKDMSTDIPEELKFSYVPIREDYRDVLILNKKYKSIDELPKG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT S RRK LL +R+D+ V+ RG ++TR+ K+ I+LA AGIKRL E
Sbjct: 121 AKIGTGSKRRKYQLLDYRTDLKVVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLEDK 180
Query: 185 IKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I L + PSP QG + +E + ++K I H+ + ERAFL ++
Sbjct: 181 IDYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEHKASTIQAEAERAFLKGVN 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C I +T+ G++ DG + G+ +A +G + A+ I
Sbjct: 241 GGCHVPIGALCNINKNTIEVTGLLGKEDGSKIIRKTLVGSIDEAEYVGYELAKIILKE 298
>gi|120437548|ref|YP_863234.1| porphobilinogen deaminase [Gramella forsetii KT0803]
gi|117579698|emb|CAL68167.1| porphobilinogen deaminase [Gramella forsetii KT0803]
Length = 305
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 164/304 (53%), Gaps = 9/304 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + +L H ++P+ + GD ++ L E+G
Sbjct: 1 MS-KVIRIGTRDSELALWQAKTVQKALEST----GHQTELVPVKSTGDLNLDQPLYEMGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +I+G++D AVHS KD+PT L KG+ +A + R + +D+ I + L++
Sbjct: 56 TGIFTKTLDVAMINGDVDIAVHSMKDVPTALPKGIVEAAIMKRANSKDLLIHKGVEFLEN 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRRKA L + V+D RG + TR+ KLN+N + + A AG++R+
Sbjct: 116 EE--GTIATGSLRRKAQWLHKYPNHKVVDLRGNVNTRMQKLNDNNWNGAIFAAAGLERI- 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + +++ P+P QGA+ I + + + V+NH+++ V+ ER FL L
Sbjct: 173 -EIKPENFIDLNWMIPAPAQGAMLIVAMEEDEYCRRALSVLNHKESELCVHVEREFLKTL 231
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A + ++F+G + + DGK EV R+ + ++G++ AQ I
Sbjct: 232 EGGCTAPIGALAKILNNHVHFHGALFSLDGKKKMEVERSLPVAEIEDMGKECAQEILKNG 291
Query: 301 NKNV 304
K +
Sbjct: 292 GKEL 295
>gi|134296607|ref|YP_001120342.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4]
gi|166201499|sp|A4JGV4|HEM3_BURVG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|134139764|gb|ABO55507.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4]
Length = 333
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFALAAIMAREDARDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++++ED P+ GQGA+ IE + + + ++ T +V ER L GSC
Sbjct: 196 IRALIDVEDSLPAAGQGALGIEIAAHRSDVAQWLAPLHDPHTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DG+ G DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGRRVLSAQACGAVMTAADALALGRAVSDELDAQGA 315
Query: 302 KNVFN 306
+++ N
Sbjct: 316 RDIVN 320
>gi|283470938|emb|CAQ50149.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ST398]
Length = 308
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDDELLSLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|295109819|emb|CBL23772.1| hydroxymethylbilane synthase [Ruminococcus obeum A2-162]
Length = 308
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 97/295 (32%), Positives = 156/295 (52%), Gaps = 8/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG+R S LA+ + R + H P ++ I+ + T GD+I +RTL ++GGKG
Sbjct: 7 QNKVIIGSRESRLAVLQSEMVRDYIKTQH--PELDVEILTMKTTGDKILDRTLDKVGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++K L+ G +VHS KDMP ++ L + A+ RED RDV + S DL
Sbjct: 65 LFVKELDKALLEGRTMLSVHSLKDMPMEVPGELPLLAFSKREDPRDVLVLPEGVSELDLT 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+G SSLRR L ++ V RG ++TRL KL+N + ++LA AG+KRL E
Sbjct: 125 --KPLGCSSLRRTLQLKELYPEMEVKSIRGNLQTRLRKLDNGEYSGLILAAAGLKRLGLE 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + ++ P+ GQG + ++ + ++ E W + + ERAF+ L+G
Sbjct: 183 NRICRYFSEDEILPAAGQGILAVQ--GRQDLTYDYLEGYRDEKAWFAGSAERAFVKYLNG 240
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C S +A + +G L+ G+ DG + + S G + +A +GRD A+ +
Sbjct: 241 GCSSPVAAYGVVEGDELFLRGLYYRECDG-RYFKDSIRGPKSEAEKLGRDLAKRM 294
>gi|310658305|ref|YP_003936026.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Clostridium sticklandii DSM 519]
gi|308825083|emb|CBH21121.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Clostridium sticklandii]
Length = 304
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 4/295 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL + L ++ P + I + TKGD+I + L ++ KG+F
Sbjct: 2 KIIVGSRGSQLALTQTKLIVNELSKLN--PNVDFEIKVIKTKGDKIQDIPLDKMNDKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL- 123
+EIE++LIS EID AVHS KDMPTK+ + L RED RD I L+DL++
Sbjct: 60 VKEIEEQLISYEIDMAVHSMKDMPTKMDERLVFPVIPKREDSRDALILKNNLKLEDLSML 119
Query: 124 -HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+IGT S RR RG I+TR+NKL+ I+LA +G+KR+ +E
Sbjct: 120 ETMIIGTGSKRRSYQFKASYPKAEFEPIRGNIDTRINKLHTQNLDGIILAASGLKRISRE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + + P+P QG + ++T N+ + ++ + + ERA+L E++G
Sbjct: 180 NEISHYFDEKTMIPAPCQGILALQTRTNDYQVIAVLSKVEDRCSRIQYIAERAYLEEIEG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + + + G + Y + G + G +A +GR A+ ++
Sbjct: 240 GCHAPVGAYCEINGDKITIYAVYGDEQGNKLIRDNITGATDNADELGRTLAKKMK 294
>gi|49483913|ref|YP_041137.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425786|ref|ZP_05602210.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428452|ref|ZP_05604850.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431086|ref|ZP_05607463.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433769|ref|ZP_05610127.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436685|ref|ZP_05612729.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M876]
gi|282904242|ref|ZP_06312130.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
C160]
gi|282906067|ref|ZP_06313922.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908982|ref|ZP_06316800.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911298|ref|ZP_06319100.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914467|ref|ZP_06322253.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282919436|ref|ZP_06327171.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C427]
gi|282924813|ref|ZP_06332479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C101]
gi|283958422|ref|ZP_06375873.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503545|ref|ZP_06667392.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510560|ref|ZP_06669265.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M809]
gi|293537102|ref|ZP_06671782.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|295428242|ref|ZP_06820871.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590795|ref|ZP_06949433.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
MN8]
gi|55976402|sp|Q6GG35|HEM3_STAAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49242042|emb|CAG40741.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271480|gb|EEV03626.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275293|gb|EEV06780.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278034|gb|EEV08682.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281862|gb|EEV11999.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284036|gb|EEV14159.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M876]
gi|282313179|gb|EFB43575.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C101]
gi|282317246|gb|EFB47620.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
C427]
gi|282321648|gb|EFB51973.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282324993|gb|EFB55303.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327246|gb|EFB57541.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331359|gb|EFB60873.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595860|gb|EFC00824.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
C160]
gi|283790571|gb|EFC29388.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919947|gb|EFD97015.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|291095211|gb|EFE25476.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466451|gb|EFF08972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
M809]
gi|295127642|gb|EFG57279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575681|gb|EFH94397.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
MN8]
gi|298694941|gb|ADI98163.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED133]
gi|312437871|gb|ADQ76942.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH60]
gi|315195573|gb|EFU25960.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 308
Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|322435837|ref|YP_004218049.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9]
gi|321163564|gb|ADW69269.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9]
Length = 318
Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 100/320 (31%), Positives = 162/320 (50%), Gaps = 21/320 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN---RTLTE 57
M + RIG+R S LAL A + L H + I + T GDR+
Sbjct: 1 MTQ--IRIGSRGSQLALWQANHIAAELRAH----GHQVEIEVIRTTGDRMQQPGFVPPPG 54
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
+ GKG+F +EIE L+ G ID AVHS KD+PT + I+A PR D RD F+ +
Sbjct: 55 LDGKGIFIKEIEDALLDGRIDLAVHSYKDLPTTIDPRFTIAAVPPRADARDAFVCEPYWA 114
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L L IGT+S RR+A LL R D++ ++ RG I+TRL KL A++LA AG+
Sbjct: 115 LHTLPHAGRIGTTSPRRRAQLLALRPDLTFVELRGNIDTRLRKLEEGACDALVLACAGLD 174
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIET-----------HVNNPKAQELVKVINHEDT 226
R+ + + + + ++++ P+PGQGA+ +ET +P + ++ + H +T
Sbjct: 175 RIARTESVHQRFDVDELTPAPGQGALALETRSPAHALDTEDPTRDPAIYKAIRALEHPET 234
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-A 285
+ + ERAFLAE+ G C+ + Y VL+ DG+ + + + + + A
Sbjct: 235 RFATDAERAFLAEMGGGCELPLGAHCLSTSGVYRLYAQVLSPDGEYMVQTTLDRHPEEPA 294
Query: 286 INIGRDAAQYIRFISNKNVF 305
+G+ AA+ ++ ++
Sbjct: 295 AALGQRAAEILKAQGALDLL 314
>gi|255657374|ref|ZP_05402783.1| porphobilinogen deaminase [Clostridium difficile QCD-23m63]
gi|296448968|ref|ZP_06890759.1| hydroxymethylbilane synthase [Clostridium difficile NAP08]
gi|296879793|ref|ZP_06903766.1| hydroxymethylbilane synthase [Clostridium difficile NAP07]
gi|296262194|gb|EFH08998.1| hydroxymethylbilane synthase [Clostridium difficile NAP08]
gi|296429082|gb|EFH14956.1| hydroxymethylbilane synthase [Clostridium difficile NAP07]
Length = 301
Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 106/295 (35%), Positives = 159/295 (53%), Gaps = 3/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L + P + I + TKGD I N +L +IG KGLF
Sbjct: 3 IVVGTRGSNLALIQTEWVINELKKKY--PEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL
Sbjct: 61 KEIEQQLLYGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPRG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R +
Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L ++ P+P QGA+ IE N+ K + +V + E+T + ER FL ++GSC
Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSKIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+A + ++ G+ S+GK S +G+ +G A+ +
Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLKE 295
>gi|260220724|emb|CBA28572.1| Porphobilinogen deaminase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 312
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 103/296 (34%), Positives = 161/296 (54%), Gaps = 8/296 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F I TR S LAL A ++ L ++ ++ ++TKGD+I +R+L+++GGKGLF
Sbjct: 12 TFTIATRESRLALWQAEHVKALLEQ----SGASVSLLGMTTKGDQILDRSLSKVGGKGLF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL
Sbjct: 68 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E
Sbjct: 128 AVVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESR 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC
Sbjct: 188 IRAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSC 247
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNG---NRCDAINIGRDAAQYI 296
+A +A G L+ ++G + +G + +A +G A+ +
Sbjct: 248 SMPLAAYATISGDELHIRAAWGDAEGIQPVVYARASGLAKDAPEATALGEQVARDL 303
>gi|282916930|ref|ZP_06324688.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
D139]
gi|283770735|ref|ZP_06343627.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19]
gi|282319417|gb|EFB49769.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
D139]
gi|283460882|gb|EFC07972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19]
Length = 308
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|302333336|gb|ADL23529.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 308
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + F G+++ DGK E + NG + + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTLNGT--NPVELGKKVSNKLKKQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|161524048|ref|YP_001579060.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
gi|160341477|gb|ABX14563.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
Length = 402
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 87 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 144
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 145 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 204
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 205 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 264
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC
Sbjct: 265 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 324
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V DG + DA+ +GR + +
Sbjct: 325 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 384
Query: 302 KNV 304
+
Sbjct: 385 LEI 387
>gi|299533189|ref|ZP_07046573.1| porphobilinogen deaminase [Comamonas testosteroni S44]
gi|298718719|gb|EFI59692.1| porphobilinogen deaminase [Comamonas testosteroni S44]
Length = 314
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 159/300 (53%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF
Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +
Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I
Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 187 RAKFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFISN 301
+A + +G TL+ +G V + + D A +G A ++
Sbjct: 247 MPLAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQASASVTDFASANALGEQLATQLQAAGA 306
>gi|284039864|ref|YP_003389794.1| porphobilinogen deaminase [Spirosoma linguale DSM 74]
gi|283819157|gb|ADB40995.1| porphobilinogen deaminase [Spirosoma linguale DSM 74]
Length = 309
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 162/304 (53%), Gaps = 8/304 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A ++ L ++ + TKGD + +R+L +IG KG+FT
Sbjct: 3 IRIGTRSSRLAVWQAEHIQALLEK----GGLTSELVLIETKGDLVLDRSLAKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E +L SG ID AVHSAKD+P+ L L I A+ RE DV +S
Sbjct: 59 QELEDQLRSGTIDIAVHSAKDLPSNLPADLHIIAFTEREPANDVLVSRNKSLSLQGGESF 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A+L + ++ +D RG ++TR+ KL+ A+LLAYAG+ R+ + +I
Sbjct: 119 RIGTSSTRRVAMLKHYCPQLATVDMRGNLQTRIRKLDEGHCDALLLAYAGVHRMGYDDLI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVN---NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E L +++F P+ GQG+I IE + + A+ + ++INHE T + ERAFLA L+G
Sbjct: 179 VERLPLDEFTPAVGQGSIAIEVATDALKSDIAEAITRLINHEPTAACLRAERAFLARLEG 238
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C A T+ G +++ DG + +G+ ++ +G A+ I
Sbjct: 239 GCSIPSFALAQWTDDTTVSLTGGLVSLDGSQLLRETFSGSAQESHLLGHSLAEAILARGG 298
Query: 302 KNVF 305
+
Sbjct: 299 DTLL 302
>gi|126701044|ref|YP_001089941.1| porphobilinogen deaminase [Clostridium difficile 630]
gi|122973521|sp|Q180R9|HEM3_CLOD6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115252481|emb|CAJ70324.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Clostridium
difficile]
Length = 301
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 3/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L + P + I + TKGD I N +L +IG KGLF
Sbjct: 3 IVVGTRGSNLALIQTEWVINELKKKY--PEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL
Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLANGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R +
Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSAIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+A + ++ G+ S+GK S +G+ +G A+ +
Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLKE 295
>gi|325841152|ref|ZP_08167277.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1]
gi|325490009|gb|EGC92355.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1]
Length = 301
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 3/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL L H P + + TKGD I + +L +IG KGLF
Sbjct: 3 VVVGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
EIE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL
Sbjct: 61 REIEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++
Sbjct: 121 AKIGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEM 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C
Sbjct: 181 ISSYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + +G L G+ + +G G I +G + AQ++
Sbjct: 241 HIPMGAYCELEGEKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFVLKE 295
>gi|86141058|ref|ZP_01059617.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217]
gi|85833000|gb|EAQ51449.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217]
Length = 305
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 92/303 (30%), Positives = 151/303 (49%), Gaps = 6/303 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LAL A + L ++ + +I + + GD I ++ L E+G G+
Sbjct: 3 KTIRIGTRDSELALWQAHTVQDQLENL----GYKTELISVKSTGDLILDKPLYELGITGI 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ +I+G++D AVHS KD+PT+L G+ A LPR D+F+ ++ D
Sbjct: 59 FTKTLDVAMINGDVDIAVHSMKDVPTQLPNGIVQGAVLPRAATEDIFVFKKDKNATDFTK 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I T SLRRKA L V+D RG + TRL K+ +N + A AG++R+ +
Sbjct: 119 SVTIATGSLRRKAQWLNKYPKHQVVDLRGNVNTRLQKVADNDWAGAVFAKAGLERINLKP 178
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E+ ++ P+P QGA+ I N+ +E +N D + ER FL +L+G
Sbjct: 179 ENHEV--LDWMIPAPAQGAMVIAVMDNDAFCKEACAKLNDADAALTTKVEREFLRKLEGG 236
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + I A + ++F+G + + DG E+ + + ++ G A I +
Sbjct: 237 CTAPIGAIAKIEDDHIHFHGALFSLDGTQKLEIKESIPVSECLDFGALCALKILEEGGRE 296
Query: 304 VFN 306
+
Sbjct: 297 LME 299
>gi|197106866|ref|YP_002132243.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1]
gi|238058996|sp|B4RC21|HEM3_PHEZH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|196480286|gb|ACG79814.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1]
Length = 320
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 116/319 (36%), Positives = 173/319 (54%), Gaps = 16/319 (5%)
Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPH---NIV----IIPLSTKGDRITN 52
M +P RIG R S L+L + + + + P + +IP++T GDR+ +
Sbjct: 1 MPTQPVVRIGARGSKLSLTQSGIVQRRIAAALGVDPDNAAEVERVAPLIPITTTGDRVQD 60
Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112
R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L +GL I+A RED RD FIS
Sbjct: 61 RRLLEIGGKGLFTKEIEEALMDGRIDCAVHSMKDMPAELPEGLCIAAIPEREDPRDAFIS 120
Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172
+ L+DL +++GT+SLRR+A L R D+ RG +ETRL KL + AILLA
Sbjct: 121 RGPERLEDLTEGAILGTASLRRQAQCLHRRPDLEAKLLRGNVETRLGKLEAGEYDAILLA 180
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
Y+G++RL + K +++ ++ PP+PGQGA+ +ET + + + T +V
Sbjct: 181 YSGLRRLGLGHLPKSLIDPKEAPPAPGQGALAVETR-AADRDLPWAQALRCRPTTLAVAA 239
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-------A 285
ER L L+GSC++ I A+ +G T L+ DGK+ S A
Sbjct: 240 ERGALIALEGSCRTPIGAHAWLEGGTCKLIVEALSPDGKLRFRHSGEAELSQMADPEASA 299
Query: 286 INIGRDAAQYIRFISNKNV 304
++G ++ + +
Sbjct: 300 RDLGLSLGLAVKEEAGDAI 318
>gi|21283343|ref|NP_646431.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2]
gi|49486497|ref|YP_043718.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297207616|ref|ZP_06924051.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300911698|ref|ZP_07129142.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH70]
gi|23821677|sp|Q8NW74|HEM3_STAAW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|55976400|sp|Q6G8Q5|HEM3_STAAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21204783|dbj|BAB95479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2]
gi|49244940|emb|CAG43401.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296887633|gb|EFH26531.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300887119|gb|EFK82320.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
TCH70]
gi|323440785|gb|EGA98494.1| porphobilinogen deaminase [Staphylococcus aureus O11]
gi|323442940|gb|EGB00563.1| porphobilinogen deaminase [Staphylococcus aureus O46]
Length = 308
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|167746868|ref|ZP_02418995.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662]
gi|167653828|gb|EDR97957.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662]
Length = 292
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 102/296 (34%), Positives = 156/296 (52%), Gaps = 6/296 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME K RIG+R S LA+A L + P + ++ L T GD+I N+TL +IGG
Sbjct: 1 MEPKRLRIGSRESLLAVAQTRLVIEQLKANY--PELSFELVTLKTTGDKILNKTLDKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ ++
Sbjct: 59 KGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
VIG+SS RR + R + RG I TRL KL+ + ++++A AG+KR
Sbjct: 119 --FGQVIGSSSARRVLQVRRLFPEAEFQSIRGNIHTRLRKLDKGQYSSLIMAAAGLKRAG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ I ++E+ P+ GQG +C++ Q L I+ +T ER+F+ L
Sbjct: 177 LKERISRYFSVEEMLPAAGQGTLCVQV--RKDFDQSLFSCIHDRETELVTEAERSFVRAL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
DG C S IA +A GS L G+ + ++S G DA +GR A+ I
Sbjct: 235 DGGCSSPIAAYAEITGSDLCLTGLYYNAADNTGRKMSITGKAQDAGGLGRRLAEQI 290
>gi|215434281|gb|ACJ66828.1| porphobilinogen deaminase [uncultured bacterium pSY1435]
Length = 310
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LAL A R L+ + ++ ++T+GDRI +R L E+GGKGLF
Sbjct: 7 LRLGTRASALALWQARHVRDRLLARWGA-AIEVELVEITTEGDRIIDRPLNEVGGKGLFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
IE +L+ ID AVHS KD+P GL I R D RDV + +L L +
Sbjct: 66 TGIEDRLLDRSIDFAVHSMKDLPGHTPDGLAIVCTPERADARDVLVGRAGSTLVRLPAGT 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR AL R I VI RG + TR+ K+ + +LLA AG++RL+ + +
Sbjct: 126 RVGTSSLRRAALARRINPGIEVIAIRGNVPTRIAKIADGVCDVVLLAAAGLERLELAQHV 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ E F P+ QG + IE ++ + EL+ + H DT ER FLA L+G C+
Sbjct: 186 AEYLDPESFCPAACQGILAIEARADDRRVHELLAPLEHADTATLAAAERGFLARLEGGCQ 245
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A A L+ G+V+ G+ + G A +GR A+ + + +
Sbjct: 246 VPMACHARLDAGVLHVRGLVVGIGGEPLFDAREQGEPSAAAQLGRTVAEQLLVLGAAEIL 305
>gi|295095182|emb|CBK84272.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 273
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 100/263 (38%), Positives = 142/263 (53%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL L SV+GTSSLRR+ L R D+ + RG + TRL KL+
Sbjct: 61 REDPRDAFVSNRYDSLDALPAGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
N AI+LA AG+KRL E+ I+ L E P+ GQGA+ IE + + + Q L+ +N
Sbjct: 121 NGDYDAIILAVAGLKRLGLEERIRVALPPELSLPAVGQGAVGIECRLVDARTQALLAPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H+DT V ERA L+G C+ I +A L+ +V A DG R G
Sbjct: 181 HDDTAVRVKAERAMNTRLEGGCQVPIGSYAELTDGELWLRALVGAPDGSQMVRGERRGKP 240
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
DA +G A+ + + +
Sbjct: 241 QDAEALGVSLAEELLNNGAREIL 263
>gi|255102624|ref|ZP_05331601.1| porphobilinogen deaminase [Clostridium difficile QCD-63q42]
gi|255308450|ref|ZP_05352621.1| porphobilinogen deaminase [Clostridium difficile ATCC 43255]
Length = 301
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 3/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L + P + I + TKGD I N +L +IG KGLF
Sbjct: 3 IVVGTRGSNLALIQTEWVINELKKKY--PEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL
Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R +
Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+A + ++ G+ S+GK S +G+ +G A+ +
Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLKE 295
>gi|254977043|ref|ZP_05273515.1| porphobilinogen deaminase [Clostridium difficile QCD-66c26]
gi|255094370|ref|ZP_05323848.1| porphobilinogen deaminase [Clostridium difficile CIP 107932]
gi|255316123|ref|ZP_05357706.1| porphobilinogen deaminase [Clostridium difficile QCD-76w55]
gi|255518784|ref|ZP_05386460.1| porphobilinogen deaminase [Clostridium difficile QCD-97b34]
gi|255651962|ref|ZP_05398864.1| porphobilinogen deaminase [Clostridium difficile QCD-37x79]
gi|260684926|ref|YP_003216211.1| porphobilinogen deaminase [Clostridium difficile CD196]
gi|260688584|ref|YP_003219718.1| porphobilinogen deaminase [Clostridium difficile R20291]
gi|306521710|ref|ZP_07408057.1| porphobilinogen deaminase [Clostridium difficile QCD-32g58]
gi|260211089|emb|CBA66474.1| porphobilinogen deaminase [Clostridium difficile CD196]
gi|260214601|emb|CBE07178.1| porphobilinogen deaminase [Clostridium difficile R20291]
Length = 301
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 3/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L + P + I + TKGD I N +L +IG KGLF
Sbjct: 3 IVVGTRGSTLALIQTEWVINELKKKY--PEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL
Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R +
Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC
Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+A + ++ G+ S+GK S +G+ +G A+ +
Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLKE 295
>gi|161527999|ref|YP_001581825.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1]
gi|238054422|sp|A9A1A1|HEM3_NITMS RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|160339300|gb|ABX12387.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1]
Length = 311
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 162/304 (53%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ +G R S L++A + L H P I ++TKGD +R L I KG+F
Sbjct: 2 KYIVGARGSQLSVAQTNLVIAELKKAH--PDTEYEIKTITTKGDTD-SRPLFTIDQKGIF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI++ + E+D AVHS KD+P++L L ++ RE + DVFIS +L +
Sbjct: 59 EKEIDRAVAQKEVDFAVHSLKDVPSELDDNLVLACIPKRETVNDVFISPDGSTLDSIKPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSSLRR + R R D++V RG IETR+ K + AI+LA AGI RL +
Sbjct: 119 SVIGTSSLRRAVQVSRKRPDVTVKPIRGNIETRIKKASGENYDAIVLAKAGISRLGVDVK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E L+ +DF PSPGQGAI I ++ K E++K I D+ + ERA +D C
Sbjct: 179 YTE-LSTDDFSPSPGQGAIAIVARADDSKTIEMLKKIEDPDSRLEIEAERALSDFVDSGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + +A GS + + DGK F VS+ G++ + ++G+ A + +R ++
Sbjct: 238 RFPVGAYAKSNGSEMTLTVTAFSVDGKQFLHVSKTGDKNNPKSLGQSAGEELREKGVNDL 297
Query: 305 -FNF 307
N+
Sbjct: 298 ALNW 301
>gi|309790863|ref|ZP_07685407.1| porphobilinogen deaminase [Oscillochloris trichoides DG6]
gi|308227150|gb|EFO80834.1| porphobilinogen deaminase [Oscillochloris trichoides DG6]
Length = 353
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 98/333 (29%), Positives = 153/333 (45%), Gaps = 30/333 (9%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M +GTR S LA+ + ++ H + + +STKGDRI + L+ +G
Sbjct: 15 MSNATKLILGTRGSKLAVTQSGMMADAMRAAHA--GLEVEMQLISTKGDRILDVALSAVG 72
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114
KGLF +E+E+ L+ ++D VHS KD+P+ + GL ++A+ PR D RD +
Sbjct: 73 DKGLFVKELEQALLDNQVDFCVHSCKDLPSVVPDGLTLAAFPPRADARDALVVMESAVGD 132
Query: 115 -------AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167
Q L +V+GTSSLRR + R D+ + D RG ++TRL KL + +
Sbjct: 133 LDLSNFSMQDSPLLRQGAVVGTSSLRRACQIRAIRPDLDLRDVRGNVDTRLRKLADGQFE 192
Query: 168 AILLAYAGIKRLKKEKVIKE---------------ILNIEDFPPSPGQGAICIETHVNNP 212
AI+LA AG+ RL + + P+ QG + IE +
Sbjct: 193 AIILASAGLDRLGFTDATIDGPRHFEAVDARFVALPIPTTQMLPAVSQGILAIECRAADA 252
Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
L+ ++H + + ERAFLA L+G C+ IA FA +G L G+V + DG
Sbjct: 253 DTISLLGALDHAPSRAAALAERAFLARLEGGCQVPIAAFAVVEGENLRLRGMVGSLDGTT 312
Query: 273 FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G+ D IG A+ + ++
Sbjct: 313 QVRGELVGSLADPAAIGLALAEDLISQGASDIL 345
>gi|226354974|ref|YP_002784714.1| porphobilinogen deaminase [Deinococcus deserti VCD115]
gi|259647793|sp|C1CYD9|HEM3_DEIDV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226316964|gb|ACO44960.1| putative Porphobilinogen deaminase (PBG) (Hydroxymethylbilane
synthase) (HMBS) (Pre-uroporphyrinogen synthase)
[Deinococcus deserti VCD115]
Length = 311
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 108/309 (34%), Positives = 158/309 (51%), Gaps = 7/309 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGG 60
+ +GTR S LALA + L + + P + I +STKGDR + + G
Sbjct: 1 MRTVTVGTRGSTLALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRNRESLEAMAQKGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119
KG + +EIE L+ ID AVHS KD+PT+ +GL++++ R D RDV I + L
Sbjct: 59 KGFWVKEIEDALLQKRIDIAVHSLKDLPTEQPEGLEVASIPKRVDARDVLIGKEGMKRLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + +GTSS+RRKA L +R D+ VID RG I+TRL L ++ AI+LA AG+ R
Sbjct: 119 DLPQGARVGTSSVRRKAFLRAYRPDLQVIDLRGNIDTRLAALAGDEYDAIILAAAGLIRT 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I E + + P+PGQGA+ +ET N E+ I+ T D + ER FL
Sbjct: 179 EMRHRIDEFVEPDILLPAPGQGALALETRSGPENDLTIEVAYAIHDHGTDDRITAEREFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A L C + + A KG L G V A DG + G+ + +IG + A +
Sbjct: 239 AGLGAGCMAPVGAHASIKGGVLTLEGWVGALDGSKVIRATSIGDPAECADIGAELAGDML 298
Query: 298 FISNKNVFN 306
+ + +
Sbjct: 299 GQGAQALID 307
>gi|298207313|ref|YP_003715492.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559]
gi|83849949|gb|EAP87817.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559]
Length = 305
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 95/304 (31%), Positives = 153/304 (50%), Gaps = 10/304 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A ++ L ++ + V++P+ + GD I ++ L E+G
Sbjct: 1 MS-KVIRIGTRDSELALWQANTVKAQLENL----GYKTVLVPVKSTGDLILDQPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G++D AVHS KD+PT L KG+ A L R +D+ + L
Sbjct: 56 TGIFTKTLDVAMVNGDVDIAVHSMKDVPTALPKGIMQGAVLKRAATKDILVHKGLDFL-- 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRRKA L + V+D RG + TRL KL +N + + A AG+ R+
Sbjct: 114 -EAEGTIATGSLRRKAQWLNKYPNHKVVDLRGNVNTRLQKLEDNSWNGAIFAKAGLTRIN 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ P+P QGA+ I + +E V +N + ER FL L
Sbjct: 173 VLPE--HFIELDWMLPAPAQGAMVIAVMEQDVFCKEAVSKLNDHFSEICTTIEREFLKTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A + ++F G + + DGK E+ + + + N+GR+ A I
Sbjct: 231 EGGCTAPIGALAVIEDKDIWFRGCLFSLDGKQKLEIEKRVSLKENRNLGRNCAIEILDQG 290
Query: 301 NKNV 304
K++
Sbjct: 291 GKDL 294
>gi|322379565|ref|ZP_08053902.1| porphobilinogen deaminase [Helicobacter suis HS1]
gi|322380567|ref|ZP_08054732.1| porphobilinogen deaminase [Helicobacter suis HS5]
gi|321147006|gb|EFX41741.1| porphobilinogen deaminase [Helicobacter suis HS5]
gi|321147959|gb|EFX42522.1| porphobilinogen deaminase [Helicobacter suis HS1]
Length = 302
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 5/303 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP IG+R S LAL A ++ L + + + + TKGD+I + L +IGGKG
Sbjct: 1 MKPLIIGSRGSALALWQARYIQTQLESLGLLSVIEV----VKTKGDKILDVPLAKIGGKG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ L+S +ID AVHS KD+P + ++ L ++ R D RD F+S + + KDL
Sbjct: 57 LFTKELEELLLSKDIDLAVHSLKDVPVEFVEPLDLACVSVRADARDCFLSFKSPNFKDLP 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRR L R R D+ + RG ++TRL +L + AI+LA AG++RL+ +
Sbjct: 117 KGAKVGTTSLRRSMQLKRKRPDLDTLSLRGNVQTRLKRLEAGEFDAIVLACAGVERLQIK 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ IE+ P GQGA+ +E ++P + +N + ER F+ +L G
Sbjct: 177 VPYQIPFEIEEMIPCMGQGALGVEMCTSHP-LFNTIAGLNDSTSAFLCGVERLFVKKLGG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A KG L +V DG + G A + + K
Sbjct: 236 GCQVPIGVHASLKGDHLEICAVVGLVDGSQMIKEKIQGLAKQANTLVQTLLDRFLAQGAK 295
Query: 303 NVF 305
+
Sbjct: 296 EIL 298
>gi|238022038|ref|ZP_04602464.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147]
gi|237866652|gb|EEP67694.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147]
Length = 316
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 3/303 (0%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I +R S LA+ A ++ L ++ P I II ++T+GD+I ++TL++IGGKGL
Sbjct: 8 QTLTIASRESALAMWQARHIQAQLQSLY--PQCQIHIIGMTTQGDQILDKTLSKIGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L D AVHS KD+P L +G ++A R + D F+S+ L++L
Sbjct: 66 FIKELETALQENRADLAVHSIKDVPMDLPQGFTLAAIGERANPFDAFVSNRYTRLEELPH 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ +
Sbjct: 126 GAIVGTSSLRREAQLRARFPHLTIRPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS
Sbjct: 186 RIRAVLPPADSLPAAGQGALGIEIAAHRTDLIDVLLPLNHAKTAACVTAERALARALGGS 245
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ +A + L G+V DG + A +GR A+ + +
Sbjct: 246 CQVPLAAYCTADDHGLLTLSGLVGHPDGSVILTAQAQAPAAYADALGRAVAKKLADDGAQ 305
Query: 303 NVF 305
+
Sbjct: 306 ELI 308
>gi|189351191|ref|YP_001946819.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616]
gi|189335213|dbj|BAG44283.1| hydroxymethylbilane synthase [Burkholderia multivorans ATCC 17616]
Length = 333
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC
Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V DG + DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
+
Sbjct: 316 LEI 318
>gi|317498182|ref|ZP_07956483.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894537|gb|EFV16718.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 312
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 161/304 (52%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF
Sbjct: 2 KYIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L
Sbjct: 60 VKEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E V
Sbjct: 120 AVIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDV 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC
Sbjct: 180 ITQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN- 303
+ Y + DG G + + A + I+ + +N
Sbjct: 240 HTPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGTC--PEILAQTAVKNIKKTAGRNR 297
Query: 304 VFNF 307
+FN+
Sbjct: 298 IFNW 301
>gi|254251705|ref|ZP_04945023.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158]
gi|124894314|gb|EAY68194.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158]
Length = 333
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L ++D PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 196 IRALLAVDDSPPAAGQGALGIEIASHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DG + DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGTRVLTADACAAVISVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
++
Sbjct: 316 LDI 318
>gi|322712674|gb|EFZ04247.1| porphobilinogen deaminase [Metarhizium anisopliae ARSEF 23]
Length = 327
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 157/319 (49%), Gaps = 15/319 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR SPLA+A A +SL + P + I ++T GDR N L GG
Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSI--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------ 114
KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV +
Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLA 172
++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + AI+LA
Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178
Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG+ R+ + I + L++++ + GQGA+ +E + +K I H+DT +
Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEHVLRALKEIEHKDTLLAC 238
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAIN 287
ER+ + EL+G C I L V++ GK + + +A
Sbjct: 239 LAERSLMRELEGGCSVPIGVETRWVDGKLRLRATVVSVTGKEGVDADVLETVTSEEEAEE 298
Query: 288 IGRDAAQYIRFISNKNVFN 306
+G+ A+ + + +
Sbjct: 299 LGKRVARDLVSRGADKILD 317
>gi|294010302|ref|YP_003543762.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S]
gi|292673632|dbj|BAI95150.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S]
Length = 308
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 170/306 (55%), Gaps = 6/306 (1%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L +I
Sbjct: 1 MQKPSRPLRLGTRGSPLALAQAHMTVAALRARHGWDEGAVEIVVVQTSGDRIQDRALADI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGK L+T+E+++ L SGEID AVHS KD+ T ++I+A LPR D+RD + A
Sbjct: 61 GGKALWTKELDRALASGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLV--GADDF 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L V+GTSS RR A + R R D V+ FRG + TRL +L+ +AHA LLA AG+ R
Sbjct: 119 AALPERPVVGTSSPRRAAQVRRLRPDAQVVLFRGNVATRLARLDRGEAHATLLAAAGLDR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + V + ++ P+P QGA+ IET + +L+ I+ DT+D V ERA LA
Sbjct: 179 LGQGDVGV-AIPVDVMLPAPSQGAVGIETLSGDEAMLDLLAAISDADTFDCVMAERAVLA 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G+C S IA FA + + +++ DG+ + R DA + +
Sbjct: 238 GLGGTCHSPIAAFARLEDGQVRLRAEIISPDGRETVGETARIERGDAAA-AEAMGRGLLD 296
Query: 299 ISNKNV 304
++ +
Sbjct: 297 RASPAL 302
>gi|242060650|ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
gi|241931445|gb|EES04590.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
Length = 340
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 122/299 (40%), Positives = 176/299 (58%), Gaps = 5/299 (1%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI+
Sbjct: 41 SDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEIDD 100
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130
++ G ID AVHS KD+PT L +G + LPRED RD FI TA SL +L V+G++
Sbjct: 101 AILQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDARDAFICLTANSLAELPSGCVVGSA 160
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190
SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + IL+
Sbjct: 161 SLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSILS 220
Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ IA
Sbjct: 221 MEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPIAA 280
Query: 251 FAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVFN 306
+A+ + F G++ + DG +E +R G D + +G+DA ++ + ++
Sbjct: 281 YAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 339
>gi|221199353|ref|ZP_03572397.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M]
gi|221205745|ref|ZP_03578760.1| porphobilinogen deaminase [Burkholderia multivorans CGD2]
gi|221174583|gb|EEE07015.1| porphobilinogen deaminase [Burkholderia multivorans CGD2]
gi|221180638|gb|EEE13041.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M]
Length = 333
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPHLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC
Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRADVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V DG + DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
+
Sbjct: 316 LEI 318
>gi|167585805|ref|ZP_02378193.1| porphobilinogen deaminase [Burkholderia ubonensis Bu]
Length = 328
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 164/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL +
Sbjct: 131 AVVGTSSLRREAMLRARYPHLQVQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ ++D PP+ GQGA+ IE + + ++ T +V ER L GSC
Sbjct: 191 IRALIGVDDSPPAAGQGALGIEIASHRADVAAWLAPLHDHATALAVEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V +DGK + DA+ +GR A +
Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTSEECASVMTVADALALGRAVADALEAQGA 310
Query: 302 KNV 304
++
Sbjct: 311 LDI 313
>gi|325282435|ref|YP_004254976.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP]
gi|324314244|gb|ADY25359.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP]
Length = 310
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGG 60
+ +GTR S LAL+ L + + P I ++TKGD+ ++ + G
Sbjct: 1 MRTVTVGTRGSTLALSQTRWVVERLKE--QWPETEFRIQTITTKGDKNRASLQSMAKAGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLK 119
KG + +EI+ L++ ID AVHS KD+PT+ +GL I++ R D RDV + +SL
Sbjct: 59 KGFWIKEIQDALLAKSIDIAVHSLKDLPTEQTEGLDIASIPKRADARDVLVGAEGFKSLA 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + IGTSS+RR+A L +R D+ VI RG IETR+ + ++ A++LA AG+ R
Sbjct: 119 DLPQGARIGTSSVRRRAFLKAFRPDLQVIPVRGNIETRMAAVASDDYDAVILAGAGLIRT 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E ++ + P+PGQGA+ +E ++ E+ IN T D + ER FLA
Sbjct: 179 DQRHRADEFVSTDILLPAPGQGALALEVRADDDLIAEVAYAINDAVTDDRITAEREFLAG 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L C + + FA KG L G V A DG + + +G+ + ++G + A+ +
Sbjct: 239 LGAGCLAPVGAFATVKGDLLTLEGWVGAVDGSEVIKATTSGDASECADLGAELAEDMLSQ 298
Query: 300 SNKNVFN 306
+ +
Sbjct: 299 GAQRLIE 305
>gi|221211567|ref|ZP_03584546.1| porphobilinogen deaminase [Burkholderia multivorans CGD1]
gi|221168928|gb|EEE01396.1| porphobilinogen deaminase [Burkholderia multivorans CGD1]
Length = 333
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMRREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E
Sbjct: 136 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC
Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301
+ +A A + LY G V DG + DA+ +GR + +
Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315
Query: 302 KNV 304
+
Sbjct: 316 LEI 318
>gi|15924660|ref|NP_372194.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927249|ref|NP_374782.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
N315]
gi|148268151|ref|YP_001247094.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH9]
gi|150394218|ref|YP_001316893.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1]
gi|156979988|ref|YP_001442247.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3]
gi|253317186|ref|ZP_04840399.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006455|ref|ZP_05145056.2| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794056|ref|ZP_05643035.1| porphobilinogen deaminase [Staphylococcus aureus A9781]
gi|258415760|ref|ZP_05682031.1| porphobilinogen deaminase [Staphylococcus aureus A9763]
gi|258422003|ref|ZP_05684923.1| porphobilinogen deaminase [Staphylococcus aureus A9719]
gi|258438239|ref|ZP_05689523.1| porphobilinogen deaminase [Staphylococcus aureus A9299]
gi|258443697|ref|ZP_05692036.1| porphobilinogen deaminase [Staphylococcus aureus A8115]
gi|258444935|ref|ZP_05693255.1| porphobilinogen deaminase [Staphylococcus aureus A6300]
gi|258447989|ref|ZP_05696121.1| porphobilinogen deaminase [Staphylococcus aureus A6224]
gi|258454303|ref|ZP_05702272.1| porphobilinogen deaminase [Staphylococcus aureus A5937]
gi|269203288|ref|YP_003282557.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED98]
gi|282893166|ref|ZP_06301400.1| porphobilinogen deaminase [Staphylococcus aureus A8117]
gi|282929344|ref|ZP_06336911.1| porphobilinogen deaminase [Staphylococcus aureus A10102]
gi|295405981|ref|ZP_06815789.1| porphobilinogen deaminase [Staphylococcus aureus A8819]
gi|296274902|ref|ZP_06857409.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MR1]
gi|297245093|ref|ZP_06928970.1| porphobilinogen deaminase [Staphylococcus aureus A8796]
gi|54037282|sp|P64341|HEM3_STAAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54041349|sp|P64340|HEM3_STAAM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217788|sp|A7X391|HEM3_STAA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028098|sp|A6U2D8|HEM3_STAA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028160|sp|A5ITJ5|HEM3_STAA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|13701467|dbj|BAB42761.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
N315]
gi|14247442|dbj|BAB57832.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
Mu50]
gi|147741220|gb|ABQ49518.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|149946670|gb|ABR52606.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1]
gi|156722123|dbj|BAF78540.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3]
gi|257788028|gb|EEV26368.1| porphobilinogen deaminase [Staphylococcus aureus A9781]
gi|257839353|gb|EEV63826.1| porphobilinogen deaminase [Staphylococcus aureus A9763]
gi|257842047|gb|EEV66476.1| porphobilinogen deaminase [Staphylococcus aureus A9719]
gi|257848283|gb|EEV72274.1| porphobilinogen deaminase [Staphylococcus aureus A9299]
gi|257851103|gb|EEV75046.1| porphobilinogen deaminase [Staphylococcus aureus A8115]
gi|257856143|gb|EEV79058.1| porphobilinogen deaminase [Staphylococcus aureus A6300]
gi|257858750|gb|EEV81621.1| porphobilinogen deaminase [Staphylococcus aureus A6224]
gi|257863533|gb|EEV86292.1| porphobilinogen deaminase [Staphylococcus aureus A5937]
gi|262075578|gb|ACY11551.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ED98]
gi|282589076|gb|EFB94177.1| porphobilinogen deaminase [Staphylococcus aureus A10102]
gi|282764484|gb|EFC04610.1| porphobilinogen deaminase [Staphylococcus aureus A8117]
gi|285817354|gb|ADC37841.1| Porphobilinogen deaminase [Staphylococcus aureus 04-02981]
gi|294968978|gb|EFG44999.1| porphobilinogen deaminase [Staphylococcus aureus A8819]
gi|297178173|gb|EFH37421.1| porphobilinogen deaminase [Staphylococcus aureus A8796]
gi|312830049|emb|CBX34891.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315130698|gb|EFT86684.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727593|gb|EGG64049.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
21172]
Length = 308
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + + L V P I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFINKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L
Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D
Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++
Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|307720830|ref|YP_003891970.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294]
gi|306978923|gb|ADN08958.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294]
Length = 319
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 170/305 (55%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL A+ + + + P +V+ + + GD++ ++ L IGGKG
Sbjct: 1 MKKLTIATRVSDLALWQAYHIKERVEVNY--PEIEVVLNKIVSNGDKVLDKPLALIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+E+E ++++G + AVHS KD+PT + GL++ A R+D DVF+SHT +L DL
Sbjct: 59 HFTKELEDEMLAGNAELAVHSLKDVPTYIPDGLELVAVTQRQDQSDVFLSHTYATLDDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180
+V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LA+ G+ RL
Sbjct: 119 KGAVVGTTSLRRRMQLLQKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAWIGLNRLDLL 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K+ + L+++ P GQ A+ IE +N K +E+ K +N EDT+ ER F++++
Sbjct: 179 KDIPYTQKLSLDMMIPPMGQAALGIEIISDNEKVREIAKSLNDEDTFTCTQIERDFISKI 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + +A A G + F ++ DG + ++ ++ N+G++ AQ +
Sbjct: 239 GAGCSAPVACNAVIDGDNVVFRTMIGFPDGTNIMQKKVVKSKNESENLGKELAQKMINNG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ALKLL 303
>gi|168057909|ref|XP_001780954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667588|gb|EDQ54214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 299
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 4/299 (1%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
SPLALA A++TR L H + II + T GD+I ++ L +IGGKGLFT+EI+
Sbjct: 1 SPLALAQAYQTRDKLKAAHPGLAEEGALEIIIIKTTGDKILSQPLADIGGKGLFTKEIDD 60
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130
L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L SV+G++
Sbjct: 61 ALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEGSVVGSA 120
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190
SLRR++ +L + V +FRG ++TRL KL+ A LLA AG+KRL + I IL
Sbjct: 121 SLRRQSQILHKYPHLKVENFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEHITAILA 180
Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+D P+ QGAI I + K +E + +NHE T +++CERAFLA+LDGSC++ IAG
Sbjct: 181 TDDMLPAIAQGAIGIACRTGDSKMEEYLASLNHEGTRLAISCERAFLAKLDGSCRTPIAG 240
Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISNKNVFNF 307
A F G+V +DGK E SR G + D I + +DA + + + F +
Sbjct: 241 LAERTEDGCSFRGLVATTDGKQVLETSRKGSFSYDDMIALAQDAGAELISRAGPDFFKW 299
>gi|87117970|gb|ABD20292.1| HemC [Shigella boydii]
gi|87118022|gb|ABD20318.1| HemC [Shigella flexneri]
gi|87118024|gb|ABD20319.1| HemC [Shigella flexneri]
gi|87118026|gb|ABD20320.1| HemC [Shigella flexneri]
gi|87118028|gb|ABD20321.1| HemC [Shigella flexneri]
gi|87118034|gb|ABD20324.1| HemC [Shigella flexneri]
gi|87118038|gb|ABD20326.1| HemC [Shigella flexneri]
gi|87118040|gb|ABD20327.1| HemC [Shigella flexneri]
Length = 272
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G DA +G A+ +
Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272
>gi|121595211|ref|YP_987107.1| porphobilinogen deaminase [Acidovorax sp. JS42]
gi|120607291|gb|ABM43031.1| porphobilinogen deaminase [Acidovorax sp. JS42]
Length = 320
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 155/300 (51%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A +S L H + ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 21 IVIATRESQLALWQAEHVQSLLRAR----GHAVALLGMTTRGDQILDRTLSKVGGKGLFV 76
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L +
Sbjct: 77 KELEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGA 136
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I
Sbjct: 137 VVGTSSLRRQALLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERI 196
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC
Sbjct: 197 RAVFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCS 256
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+A G TL ++ A +G A +R
Sbjct: 257 MPLAAHGQWDGDTLSLRAAWGDVAARVPLVRAEGAAPVHTLEQADALGLAVAAQLRTAGA 316
>gi|163848145|ref|YP_001636189.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl]
gi|222526046|ref|YP_002570517.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl]
gi|163669434|gb|ABY35800.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl]
gi|222449925|gb|ACM54191.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl]
Length = 324
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 149/310 (48%), Gaps = 14/310 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LA + +L P + + +ST GDR+ + L+ +G KGLF +E
Sbjct: 6 LGTRGSALARVQSVWVADALRTA--FPSLEVELRIISTTGDRVLDVALSAVGDKGLFVKE 63
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---ALH 124
+E L++ E+D VHSAKDMPT GL ++A+ R D RDV + A DL
Sbjct: 64 LEHALLASEVDLCVHSAKDMPTATPDGLVLAAFPVRVDPRDVLVVRQAGLGTDLATLPAG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSSLRR + + R D+ + D RG ++TRL KL + + A++LA AG++RL
Sbjct: 124 ARVGTSSLRRTSQVRHHRPDLQLTDVRGNVDTRLRKLASGQYDALILAAAGLRRLGLWDG 183
Query: 185 IK---------EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
L P+ QG + IET ++ + LV+ ++ + ERA
Sbjct: 184 TPGAQIGEAVVYPLEPSVMLPAVAQGILAIETRADDEATRTLVESLDDPAARAAALAERA 243
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L L+G C+ +A A + ++ G+V DG + G+ A +G A+
Sbjct: 244 LLRRLEGGCQIPVAAHAVMTDTGMHLRGMVGTLDGSTLVFAEQTGDPAQAEALGVAVAEE 303
Query: 296 IRFISNKNVF 305
+ +
Sbjct: 304 LLARGGDAIL 313
>gi|172058146|ref|YP_001814606.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15]
gi|254800251|sp|B1YJV1|HEM3_EXIS2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|171990667|gb|ACB61589.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15]
Length = 308
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LA+ L P+ I + TKGDRI + TL+++GGKG
Sbjct: 1 MRKIIVGSRSSKLAMTQTKWVIEQLKQAGA--PYEFEIKNIITKGDRILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+++I +ID AVHS KD+P++L GL I A R D RD I+ T L L
Sbjct: 59 LFVKEIEQQMIDEDIDFAVHSMKDLPSELPTGLIIGATPSRVDARDALITTTGGGLDSLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+++GTSSLRR + LL+ R D+ + RG I+TRL KL ILLA AG++R+
Sbjct: 119 EGAIVGTSSLRRGSQLLKLRPDLKIESIRGNIDTRLEKLKTGPFDGILLAAAGLQRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E ++ E ++ +D P+ GQG + IE N+ + ++L+ +I+ + T ER+FLA ++
Sbjct: 179 EDIVSEYISTDDMIPAVGQGILAIECRANDQEVRDLLNLIHDQMTEKVAFAERSFLAAIE 238
Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC + GFA + G + + DG+ D + +G+ A +
Sbjct: 239 GSCHVPVGGFATINEDLSTTLVGFLGSVDGQQILLERETS--LDPMQLGQTVATRLLDAG 296
Query: 301 NKNVF 305
+ +
Sbjct: 297 GREIL 301
>gi|307636930|gb|ADN79380.1| porphobilinogen deaminase [Helicobacter pylori 908]
gi|325997118|gb|ADZ49326.1| Porphobilinogen deaminase [Helicobacter pylori 2017]
Length = 306
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 97/303 (32%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L++IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECS---MESEIRIVKTKGDKILDTPLSKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183
+ +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL +
Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++++ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ R+ + K
Sbjct: 239 CQIPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|167644091|ref|YP_001681754.1| porphobilinogen deaminase [Caulobacter sp. K31]
gi|189042878|sp|B0T287|HEM3_CAUSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167346521|gb|ABZ69256.1| porphobilinogen deaminase [Caulobacter sp. K31]
Length = 318
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 169/316 (53%), Gaps = 12/316 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV-HKIPPHNI----VIIPLSTKGDRITNRTL 55
M ++P RIG R S L+LA + ++ + P +I +IP+ T GDRI +R L
Sbjct: 1 MSRQPIRIGARGSKLSLAQSGLMQARIAAALGAGPGDDIDAFAQLIPIVTSGDRIQDRRL 60
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
EIGGKGLFT+EIE+ L+ G IDCA+HS KDMP +L GL ++A RED RD FISH A
Sbjct: 61 MEIGGKGLFTKEIEEALLDGRIDCAIHSLKDMPAELPPGLVLAAVPEREDPRDAFISHVA 120
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+ L+DL+ + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +G
Sbjct: 121 ERLEDLSKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQSG 180
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + L+ PP+PGQGA+ IET ++ + + T +V ER
Sbjct: 181 LNRLGLGHITNSWLDPLAAPPAPGQGALVIETR-AEDVDLPWLQAVRCQATTLAVAAERG 239
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN------RCDAINIG 289
L L+GSC++A+ A G L L DG + A +G
Sbjct: 240 ALYALEGSCRTAVGAHARLDGLILTMIVEALTPDGVQRFRREGSATLSSLDAADQARALG 299
Query: 290 RDAAQYIRFISNKNVF 305
+ +R +
Sbjct: 300 LELGGAVRAEGGPALI 315
>gi|269926448|ref|YP_003323071.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798]
gi|269790108|gb|ACZ42249.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798]
Length = 300
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 87/298 (29%), Positives = 149/298 (50%), Gaps = 4/298 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LAL + L ++ P + + DR + ++ IG G
Sbjct: 1 MKVIKVGTRGSKLALWQTQWVINRLRSLY--PGFQFEPVVIKVTSDRSPDAPISAIGQVG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT++IE+ L++G+I AVHS KD+PT G I+A+ RED RD + Q + D
Sbjct: 59 VFTKDIEQALLAGDIHLAVHSLKDLPTLSTPGTVIAAFTEREDPRDCILWPKGQPMPD-L 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+S +GTSS+RR AL+ + + +V++ RG ++TR+ K+ +L+AYA +KR+
Sbjct: 118 NNSRVGTSSVRRSALVRSYWPNANVVNLRGNVDTRVRKMLEGNYDVVLMAYAAVKRMD-L 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + L ++ + PS GQG I ++ ++ + ++ IN + + ER+ + L G
Sbjct: 177 PVEFKPLPLDSWVPSAGQGIIAVQAREDDQQIIGMLNAINFFPSKVAYLAERSLMRALGG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + +A L G+V A DG R A ++G A+ + +
Sbjct: 237 GCSMPVGAYAELHDGELSLIGMVAAPDGSQVVITRRVDTPDQADHLGERVAREMLDLG 294
>gi|254508818|ref|ZP_05120929.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16]
gi|219548275|gb|EED25289.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16]
Length = 271
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ TKGD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL +
Sbjct: 1 MVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+T ++ +L +V+GT SLRR+ + +R D+ + + RG + TRL KL+
Sbjct: 61 REDPRDAFVSNTYNNIDELPHGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +N
Sbjct: 121 AGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H+DT D V CERA L+G C+ I +A G ++ +V DG G R
Sbjct: 181 HQDTADRVLCERAMNLTLEGGCQVPIGSYALLDGDEIWLRALVGEPDGSEIVRGEIKGAR 240
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
DA N+G A + + +
Sbjct: 241 ADAENLGVTLANQLLDKGAREIL 263
>gi|300703401|ref|YP_003745003.1| hydroxymethylbilane synthase [Ralstonia solanacearum CFBP2957]
gi|299071064|emb|CBJ42373.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum CFBP2957]
Length = 334
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 160/304 (52%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 22 LVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFV 79
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L G + A L RED RD F+S+ L L +
Sbjct: 80 KELEVALAEGRADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGA 139
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL + I
Sbjct: 140 VVGTSSLRREASLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERI 199
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ + P+ GQGA+ IET + Q + ++H T +V ERA L GSC+
Sbjct: 200 RAVIASDVSLPAAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQ 259
Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+A FA+ L V + DG+ +A +G AQ +
Sbjct: 260 VPLAAFAHWTDAGALRLRAFVASQDGRRKLAAEGEATPATLAEAEALGAHVAQQMLDGGA 319
Query: 302 KNVF 305
+++
Sbjct: 320 RDIL 323
>gi|193215989|ref|YP_001997188.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110]
gi|238058923|sp|B3QWI1|HEM3_CHLT3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|193089466|gb|ACF14741.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110]
Length = 314
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 120/295 (40%), Positives = 172/295 (58%), Gaps = 6/295 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK IGTR SPLAL A ++ L + P +I + + T GD+I + L +IG K
Sbjct: 1 MKKALIIGTRSSPLALWQAEFIKAELSKHY--PSLDISLRHIKTTGDKILDAPLAKIGDK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT EIE ++ EID AVHS KD+PT+ +GL I+A RED RDV IS +LK L
Sbjct: 59 GLFTREIEHVMLRNEIDLAVHSLKDLPTETPEGLVITAITEREDNRDVLISKGKYTLKTL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++ TSSLRR++ LL R D+ VID RG + TR + A A+LLA+AG+ RL+
Sbjct: 119 PQGAIVATSSLRRRSQLLHLRPDLEVIDMRGNLNTRFKRFEEGDAEAMLLAFAGVHRLEF 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I EI++ +D P+ GQGA+ IET +++ + +EL+KV+NH +T CER+ L L+
Sbjct: 179 SEHIAEIISFDDILPAVGQGALGIETRIDDEETRELLKVLNHAETELCTKCERSLLRTLE 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDA 292
G C+ I A + T +F V + DGK + S + +A IG +
Sbjct: 239 GGCQIPIGAHARIENGTFHFATYVGSIDGKRAIKKSLSRENVTTVEEAEQIGIEV 293
>gi|254467792|ref|ZP_05081198.1| porphobilinogen deaminase [beta proteobacterium KB13]
gi|207086602|gb|EDZ63885.1| porphobilinogen deaminase [beta proteobacterium KB13]
Length = 292
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A + + + P + ++ T+GD I ++ L EIGGKGLF +E+E L++ +
Sbjct: 1 MWQANYIADRIREKY--PDTEVNVLSFKTQGDIILDQPLAEIGGKGLFIKELEHALLNDD 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L + +I A RE+ D FIS+ SL DL +VIGTSSLRR++
Sbjct: 59 ADLAVHSMKDVPMDLPEPFEICAISERENPSDAFISNKYASLDDLPQDAVIGTSSLRRQS 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L+ R D+ + RG ++TRL KL++ AI+LA AG+ RL E IK L+++ + P
Sbjct: 119 LIKHTRPDLIIESLRGNLQTRLKKLDSGIYDAIILASAGLIRLNLENRIKSTLDVKQYIP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
S GQGA+ IE N + +E + +N E T V ER L GSC + A K
Sbjct: 179 SVGQGALGIEILKNKSEVKEFLDFLNDEQTQIQVEAERKISKTLAGSCTVPMGAHASIKN 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ L V + DG + G + +++ + AQ + KN+
Sbjct: 239 NLLTIQAFVSSPDGIKMIRATDTGPCSEHLSLANNVAQSLIDQGAKNIL 287
>gi|332291690|ref|YP_004430299.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169776|gb|AEE19031.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5]
Length = 304
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 10/304 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + ++P+ + GD I ++ L E+G
Sbjct: 1 MS-KTIRIGTRDSELALWQAKTVQSQLEAN----GYKTELVPVKSTGDLILDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + D
Sbjct: 56 TGIFTKTLDVAMLNGIVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKG---APD 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRR+A L + D RG + TRL KL + + A AG+KR+
Sbjct: 113 YKQACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRIN 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ ++ P+P QGA+ I + E +NH+ T ER FL L
Sbjct: 173 VLPENYEV--LDWMIPAPAQGAMLIVAMEEDQFCLEACATLNHKPTALCTYIEREFLKTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A G + F G++ + DG EV + ++ +A+ G D A I
Sbjct: 231 EGGCTAPIGALAEEIGDDIRFRGVLFSLDGATKIEVEQVVSKANAVGFGTDCALDILDDG 290
Query: 301 NKNV 304
+ +
Sbjct: 291 GREL 294
>gi|70726258|ref|YP_253172.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435]
gi|123748643|sp|Q4L709|HEM3_STAHJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|68446982|dbj|BAE04566.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435]
Length = 310
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 169/305 (55%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P I I + TKGDRI N+ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAV--DPTLEIEIKEIVTKGDRIVNKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+++L EID A+HS KD+P+ + +GL + RE D +IS L +L
Sbjct: 59 LFVKEIQQELFDKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHIPLNELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 DGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLKKLEIEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + EL+ ++++ + V ER FL+ +D
Sbjct: 179 DDIVTTYLDKDILLPAIGQGALGIECRSDDVELLELLSKVHNQAVANCVTAERTFLSAMD 238
Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + + F G+++ DG +E + G + +++G ++ ++
Sbjct: 239 GSCQVPIGGYATNKENGEIEFTGLIMTPDGTKRYEHTEVGK--NPVDLGEAVSRVLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|124027712|ref|YP_001013032.1| porphobilinogen deaminase [Hyperthermus butylicus DSM 5456]
gi|158513943|sp|A2BL26|HEM3_HYPBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|123978406|gb|ABM80687.1| Porphobilinogen deaminase [Hyperthermus butylicus DSM 5456]
Length = 303
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 5/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L++A ++ V P ++ + T+GD ++ T IGGKGLF
Sbjct: 2 KLRVATRGSKLSIAQTMIALEAIKRVE--PSLEYELVIVKTRGDIHQDKPFTAIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--TAQSLKDLA 122
+E+ ++ G D AVHS KD+P+ + GL ++ PR+ DV + +++ DL
Sbjct: 60 EKEVNLAVLEGRADIAVHSLKDVPSAISPGLVLAMTPPRDPPYDVLVVRGGKEKTIWDLP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+++GTSS RR A+L R D+ RG ++TRL KL + AI+LA AG+KRL +
Sbjct: 120 SGAIVGTSSARRVAMLKHVRRDLVFKVLRGNVDTRLRKLEQGQYDAIVLAEAGLKRLGVD 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + PP+PGQG I + T + +++ + + ERAFLA G
Sbjct: 180 IEYW-RIPPDILPPAPGQGIIGVYTLSSRSDILPILEKASDQKAMAEARAERAFLAYAGG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + + +A +G+TLYF+ + + DG EV G+ +G +AA +R ++ +
Sbjct: 239 GCHTPLGAYAELRGNTLYFHAALASPDGSRRVEVRVEGDPDKPTQVGLEAAFELRRLAAR 298
Query: 303 N 303
Sbjct: 299 E 299
>gi|297197348|ref|ZP_06914745.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
gi|297146690|gb|EDY58887.2| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
Length = 314
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 151/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA RS L ++ P ++P+ T GD+ L+++ GKG FT
Sbjct: 10 IRIVSRDSPMALAQVERVRSELTALY--PGVRTEVVPVRTTGDKWMG-DLSKVEGKGAFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L
Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTTFAAFLKRDDIRDALIHPGGLTLDELPE 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++
Sbjct: 127 GTRVGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLEAGEADALLLAVAGLERIGRQD 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + + + V + DT+ ER FL L G
Sbjct: 187 VISEVLSPETMMPPIGAGILGLQCREGDTELIDAVSALGDPDTYREATAERMFLHVLQGH 246
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A G L V DGK R D +G A + +
Sbjct: 247 CNSPIAGYARVDHGDELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 306
Query: 303 NVFN 306
+ +
Sbjct: 307 EIID 310
>gi|325262509|ref|ZP_08129246.1| hydroxymethylbilane synthase [Clostridium sp. D5]
gi|324032341|gb|EGB93619.1| hydroxymethylbilane synthase [Clostridium sp. D5]
Length = 293
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 100/299 (33%), Positives = 151/299 (50%), Gaps = 7/299 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIG+R S LA+ A + + H P + ++ + T GD+I +++L IGG
Sbjct: 1 MSS-VIRIGSRESRLAVIQAEIVKELIQKNH--PDIQVELVTMKTTGDKILDKSLELIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E++K L+ G ID +VHS KDMP ++ K L I+AY RED RD I +
Sbjct: 58 KGLFVKELDKALLEGSIDISVHSLKDMPMEIPKELPIAAYSKREDPRDALICRPGC--CE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ + VIGTSS RR L + + + RG ++TRL KL +LA AG+ RL
Sbjct: 116 IPVDGVIGTSSRRRSLQLKKLYPECTFRQIRGNVQTRLRKLEEEGYDGTILAAAGLSRLN 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E VI I + E+ P+ GQG + ++ + + ++ + ER F+A L
Sbjct: 176 MEHVIGRIFSTEEMIPAAGQGILAVQGRKGEDHFF--LDCVENKKSRAEALAEREFVAVL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C S +A A G+ L G+ + + +R GN DA +G A+ +R
Sbjct: 234 DGGCTSPVAAHAEVNGNELKLTGLYYREEDDTYWTETRIGNTADARQLGAALAEEMRRR 292
>gi|222111550|ref|YP_002553814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY]
gi|221730994|gb|ACM33814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY]
Length = 310
Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A +S L H + ++ ++T+GD+I +RTL+++GGKGLF
Sbjct: 11 IVIATRESQLALWQAEHVQSLLRAR----GHAVALLGMTTRGDQILDRTLSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L +
Sbjct: 67 KELEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I
Sbjct: 127 VVGTSSLRRQVLLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC
Sbjct: 187 RAVFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCS 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISN 301
+A G TL ++ A +G A +R
Sbjct: 247 MPLAAHGQWDGDTLSLRAAWGDVAARVPLVRAEGAAPVHTLEQADALGLAVAAQLRTAGA 306
>gi|260588741|ref|ZP_05854654.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583]
gi|260540923|gb|EEX21492.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583]
Length = 296
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 6/298 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG+R S LA+ + R + + + + I+ + T GD+I +RTL +IGGKG
Sbjct: 1 MRKVVIGSRESKLAVVQSEMVRDYIRENNA--DIQVEILTMKTTGDKILDRTLDKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + D
Sbjct: 59 LFVKELDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLVLPKGVTQLD-- 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IG SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E
Sbjct: 117 TSKPIGCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLE 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+ P+ GQG + I+ + +K E+ + ERAF+ L+G
Sbjct: 177 DRIARYFEPEEMIPAAGQGILAIQGRKDVD--YSYLKGYGDENATYAALAERAFVRYLNG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C S +A A + + G+ + + + + G+ A +G A+ ++ S
Sbjct: 235 GCSSPVAAHARVEDGQIILRGLYYDENTGNYEKGLKKGSAEAAEELGISLAKELQERS 292
>gi|223040967|ref|ZP_03611228.1| porphobilinogen deaminase [Campylobacter rectus RM3267]
gi|222877764|gb|EEF12884.1| porphobilinogen deaminase [Campylobacter rectus RM3267]
Length = 309
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK +I TR S LA+ + R ++ + P + + + TKGD I + L +IGG
Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKILSRY--PELAVELTGMKTKGDVILDTPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D
Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL
Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ I+ ++ P+ GQGA+ IE + + L++ + E ER F+A
Sbjct: 177 LRSEVAHIVPFELDQMIPAMGQGALGIEAR-EDAEILNLIEFLKDEKAVIETTVERDFVA 235
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I A G + +V DG + + + ++G + +
Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDGSESIRENIVAQKSEWKSVGAELGRIFIG 295
Query: 299 ISNKNVF 305
K +
Sbjct: 296 KGAKELL 302
>gi|254458597|ref|ZP_05072022.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1]
gi|207084905|gb|EDZ62192.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1]
Length = 319
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 97/305 (31%), Positives = 166/305 (54%), Gaps = 4/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
I TR S LAL A+ ++ + + P + + + + GD++ ++ L IGGKG
Sbjct: 1 MNKLVIATRVSDLALWQAYHIKARVEASY--PEITVELNKIVSNGDKVLDKPLALIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+E+E ++++G D AVHS KD+PT + +GL++ A R+D DVF+SH +L+DL
Sbjct: 59 HFTKELEDEMLAGNADIAVHSLKDVPTYIPEGLELVAVTQRQDQSDVFLSHKHATLEDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180
+V+GT+SLRR+ LL+ R D+ V D RG + TRL KL+ + AI+LA+ G+ RL
Sbjct: 119 QGAVVGTTSLRRRMQLLQQRPDLKVKDLRGNVNTRLRKLSEGQYDAIILAWIGLHRLDLL 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K+ + L+++ P GQ A+ IE N K +E+ + + +T+ ER F++++
Sbjct: 179 KDVPFTQKLSLDMMIPPMGQAALGIEIVCGNAKVREIAESLKDLNTFICTQIERDFISKI 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + +A A + + F ++ DG + N D+ N+G + A+ +
Sbjct: 239 GAGCSAPVACNAVIDDNIITFRVMLGFPDGTNIMQEKVVINVEDSDNLGSELAKKMIDNG 298
Query: 301 NKNVF 305
+
Sbjct: 299 ALELL 303
>gi|125975012|ref|YP_001038922.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405]
gi|256005102|ref|ZP_05430072.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360]
gi|281418570|ref|ZP_06249589.1| porphobilinogen deaminase [Clostridium thermocellum JW20]
gi|167008812|sp|A3DIF0|HEM3_CLOTH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125715237|gb|ABN53729.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405]
gi|255990953|gb|EEU01065.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360]
gi|281407654|gb|EFB37913.1| porphobilinogen deaminase [Clostridium thermocellum JW20]
gi|316939173|gb|ADU73207.1| porphobilinogen deaminase [Clostridium thermocellum DSM 1313]
Length = 292
Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats.
Identities = 93/298 (31%), Positives = 154/298 (51%), Gaps = 8/298 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LA+ A S+ + P I ++ + T GD+I ++T+ +IGGKGLF
Sbjct: 2 KIRVGSRESKLAVRQAQIVIDSIKKYN--PDIEIELVTMKTTGDKILDKTIDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+++ L+ G++D VHS KDMP + L I A RED RDV + ++ D +
Sbjct: 60 VKELDRALLDGKVDITVHSFKDMPMDIDDRLPIVAVSKREDPRDVLVLPKGKNEID--FN 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG SS RRK + + +V RG + TRL KL+ + AI LAYAG+KRL E+
Sbjct: 118 GPIGCSSSRRKIQIEKIYPGCTVEPIRGNVLTRLEKLDKGEYSAIALAYAGLKRLGLEER 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + ++ P+ QG I ++ ++ + +D+WD ER+F+ L+G C
Sbjct: 178 IWRVFSTDEIVPAACQGIIAVQA--RKDFDASILANFHDKDSWDVSVAERSFIKALNGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
S A + +G + G + +GK +++++ G+R +G A +
Sbjct: 236 SSPSAAYGVIQGEKIVLTGFYVDKNGK-IYKMTKTGDRNQGEALGYSLAMEML-KGAD 291
>gi|190683048|gb|ACE81820.1| hydroxymethylbilane synthetase [Oxyrrhis marina]
Length = 395
Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats.
Identities = 128/301 (42%), Positives = 181/301 (60%), Gaps = 3/301 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA A + S + + I I +ST+GDRI +R L ++GGKGLFT
Sbjct: 76 LRIGTRGSPLALAQARDVESRAREQLQQGG-EIDICVISTEGDRILDRALADVGGKGLFT 134
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+SGE+DC VHS KD+PT + G +I AYLPRED RDVF+S +L DL +
Sbjct: 135 KELDRALLSGEVDCCVHSMKDVPTTVAPGTEIVAYLPREDTRDVFLSAKYATLADLPDGA 194
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT+SLRR+A +L + ++ V +FRG ++TRL KL LAYAG+KRL
Sbjct: 195 VVGTASLRRQAQILA-QKNVVVTNFRGNVQTRLRKLAAGTVDCTFLAYAGLKRLGMLAEA 253
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++L D P+ QGA+ I+ N+ + + ++HE T +V ERAFL LDGSC+
Sbjct: 254 TQVLEWSDMLPAIAQGAVGIQIRSNDAALRGTLSQLDHEPTRLAVETERAFLRALDGSCR 313
Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ IAG A+ S L F G VL++DGK E + CD +G+ +R + +
Sbjct: 314 TPIAGQAWIGPDSRLAFRGQVLSADGKQRFERVGDCLPCDGPELGKTLGDDLRREAGEEF 373
Query: 305 F 305
F
Sbjct: 374 F 374
>gi|255322661|ref|ZP_05363805.1| porphobilinogen deaminase [Campylobacter showae RM3277]
gi|255300222|gb|EET79495.1| porphobilinogen deaminase [Campylobacter showae RM3277]
Length = 311
Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK +I TR S LA+ + R ++ + P + + + TKGD I + L +IGG
Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKILSRY--PQIAVELTGMKTKGDVILDTPLAKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D
Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL
Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176
Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ I+ ++ P+ GQGA+ IE + + L++ + E ER F+A
Sbjct: 177 LRSEVAHIVPFELDQMVPAMGQGALGIEAR-EDSEILNLIEFLKDEKAVIETTVERDFVA 235
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C+ I A G + +V DG + + + ++G + +
Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDGSESIRENIVAQKSEWKSVGAELGRIFIG 295
Query: 299 ISNKNVF 305
K +
Sbjct: 296 KGAKELL 302
>gi|325995520|gb|ADZ50925.1| Porphobilinogen deaminase [Helicobacter pylori 2018]
Length = 306
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L++IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECS---MESEIRIVKTKGDKILDTPLSKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD +S L L
Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTVLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183
+ +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL +
Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++++ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ R+ + K
Sbjct: 239 CQIPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|331084091|ref|ZP_08333198.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330402453|gb|EGG82023.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 296
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 6/298 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG+R S LA+ + R + + + + I+ + T GD+I +RTL +IGGKG
Sbjct: 1 MRKVVIGSRESKLAVVQSEMVRDYIRENNA--DIQVEILTMKTTGDKILDRTLDKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + D
Sbjct: 59 LFVKELDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLVLPKGVTQLD-- 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IG SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E
Sbjct: 117 TSKPIGCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLE 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+ P+ GQG + I+ + +K E+ + ERAF+ L+G
Sbjct: 177 DRIARYFEPEEMIPAAGQGILAIQGRKDVD--YSYLKGYGDENATYAALAERAFVRYLNG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C S +A A + + G+ + + + + G+ A +G A+ ++ S
Sbjct: 235 GCSSPVAAHARVEDGQIILRGLYYDENTGNYEKGLKKGSAEAAEELGISLAKELQERS 292
>gi|171057453|ref|YP_001789802.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6]
gi|170774898|gb|ACB33037.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6]
Length = 322
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 10/312 (3%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +P I TR S LAL A R L H + ++ ++T+GD+I +R L+++
Sbjct: 7 MSTLPQPCIIATRESRLALWQAEHVRDLLQRRH---GAVVELLGMTTRGDQILDRALSKV 63
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +E+E L AVHS KD+P +L +G ++A L RED RD ++S+ +
Sbjct: 64 GGKGLFVKELEVALEEDRAQLAVHSLKDVPMELPEGFVLAAVLEREDPRDAWVSNHYDDV 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + +GTSSLRR L R D+ + RG ++TRL KL+ I+LA AG+KR
Sbjct: 124 ASLPQGARVGTSSLRRIVQLKAVRPDLEIHALRGNLDTRLRKLDEGLYDGIVLAAAGLKR 183
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I+ +++ P+ GQGA+ IE + +E + + TW +V+ ERA
Sbjct: 184 LGLAQRIRSVIDPAVMLPAAGQGALGIEVRADASALREALAAMTDAPTWLAVHAERAVSR 243
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLAS-DGKI-FHEVSRNGNRCD---AINIGRDAA 293
L GSC +A FA +G+ L+ + D + S D A +G
Sbjct: 244 ALGGSCSMPLAAFAQWQGAQLHLEARLGHPEDASVALIVASAEAAVTDTAGAEALGLAVV 303
Query: 294 QYIRFISNKNVF 305
+R + +
Sbjct: 304 ARLRAGGGEALL 315
>gi|32267226|ref|NP_861258.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449]
gi|39931411|sp|Q7VFE9|HEM3_HELHP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|32263279|gb|AAP78324.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449]
Length = 321
Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 10/310 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG+R S LAL A +S L I + T+GD+I + L +IGGKG
Sbjct: 8 DRELVIGSRGSILALWQAEYIKSCLKAQC---GLQSRIQIIKTRGDKILDVPLAKIGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ L+S +ID AVHS KD+P + + L ++A RE D F+S +L L
Sbjct: 65 LFTKELEEMLLSKDIDLAVHSLKDVPVEFVPELDLAAITQRESANDCFLSVNYPNLNALP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181
+ +GT+SLRR + ++RSD+ + RG ++TRL KL+N AI+LA AG+ RLK
Sbjct: 125 QGAKVGTTSLRRSMQIKKYRSDLDTLSLRGNVQTRLEKLHNGAFDAIILAQAGVNRLKIN 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ I+ ++ P+ GQGA+ IE ++ + + V+N + + V+ ERAF+ L+
Sbjct: 185 TQDVRYIVPLDFMIPAMGQGALGIEMRKDSIF-FDRIAVLNDKQSALCVSAERAFVRTLE 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCDAINIGRDAAQYI 296
G C+ I +A + L IV DG + S + + N+G AQ
Sbjct: 244 GGCQVPIGVYAQFSNNKLTLQAIVGLPDGSEVLQDSVEDSINIDDINASENLGIAFAQKF 303
Query: 297 RFISNKNVFN 306
K +
Sbjct: 304 IDKGAKELLE 313
>gi|314936225|ref|ZP_07843572.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis
C80]
gi|313654844|gb|EFS18589.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis
C80]
Length = 310
Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSKQFIDKLKAI--DPSLEIEIKEIVTKGDRIVNQQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L
Sbjct: 59 LFVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+
Sbjct: 119 KNSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +D
Sbjct: 179 DDVVTTYLDKDTLLPAIGQGALGIECRRNDIELLELLQKVHNNEVANCVTAERTFLAAMD 238
Query: 242 GSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A Y + + F G+++ DGK +E + G D + +G ++ ++
Sbjct: 239 GSCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGT--DPVKLGNRVSEILKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|311744366|ref|ZP_07718168.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272]
gi|311312332|gb|EFQ82247.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272]
Length = 311
Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats.
Identities = 88/303 (29%), Positives = 152/303 (50%), Gaps = 8/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + + +V + ++ +ST+GDR + L E+GG+G+F
Sbjct: 8 LRLGTRASVLARTQSGHVADRITEVS---GRAVELVTISTEGDR-STGPLAEMGGQGVFV 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +G +D AVHS KD+PT L ++A PRED+RDV ++ +L +L +
Sbjct: 64 AALREAVAAGHVDLAVHSLKDLPTAPDPRLALAAVPPREDVRDVVVARDGLTLGELPQGA 123
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT S RR+A + + ++ RG ++TR+ K+ + + A++LA AG+ RL +
Sbjct: 124 RIGTGSPRREAQINALGLGVEIVPIRGNVDTRIGKVASGEVDAVVLARAGLLRLGRADEA 183
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ P+PGQGA+ +E + + L+ ++ DT +V ER+ LA L+ C
Sbjct: 184 TEVLDPIQVLPAPGQGALAVECRAGDDELIGLLAALDDADTRAAVTAERSLLAALEAGCS 243
Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ + A G L+ +V G +S G +A +G A +
Sbjct: 244 APVGALAEVAWGDDGDELWIRAVVADPSGSPTIRLSATGLPAEAAAVGERLAAEMLADGA 303
Query: 302 KNV 304
+
Sbjct: 304 DRI 306
>gi|168188066|ref|ZP_02622701.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund]
gi|169294098|gb|EDS76231.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund]
Length = 300
Score = 225 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 155/299 (51%), Gaps = 6/299 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL + + + P + +STKGDRI + L +IG KGLF
Sbjct: 2 KIVVGSRGSKLALTQTNWIINEIKQNY--PQIQFEVKIISTKGDRIQHIALDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-AL 123
+EIE++LISGEID AVHS KDM T + + L+ S RED RDV I + + D +
Sbjct: 60 VKEIEEQLISGEIDMAVHSMKDMSTDIPEELKFSYVPKREDYRDVLILNKKYNSIDELPM 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++ IGT S RR+ LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL E+
Sbjct: 120 NARIGTGSKRRRYQLLQYRDDLNIVPIRGNVETRINKIETENLHGVVLAVAGIKRLNIEE 179
Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ LN PSP QG + +E + ++++K I ++ ERAFL +
Sbjct: 180 KLDYNIFYLNENIMLPSPAQGILALEIKKHREDLEKILKSIEDRNSTIQAIAERAFLKGV 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C I + G++ DG S G DA IG + A+ +
Sbjct: 240 NGGCHVPIGAICNINKDNIEVTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIVLKE 298
>gi|228475193|ref|ZP_04059919.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119]
gi|228270804|gb|EEK12206.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119]
Length = 310
Score = 225 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSKQFIDKLKAI--DPSLEIEIKEIVTKGDRIVNQQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L
Sbjct: 59 LFVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+
Sbjct: 119 KNSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ V+ L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +D
Sbjct: 179 DDVVTTYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLASMD 238
Query: 242 GSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A Y + + F G+++ DGK +E + G D + +G ++ ++
Sbjct: 239 GSCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGT--DPVKLGNRVSEILKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|322695309|gb|EFY87119.1| porphobilinogen deaminase [Metarhizium acridum CQMa 102]
Length = 327
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 106/319 (33%), Positives = 157/319 (49%), Gaps = 15/319 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR SPLA+A A +SL V P + I ++T GDR N L GG
Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSV--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------ 114
KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV +
Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLA 172
++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + AI+LA
Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178
Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG+ R+ + I + L++++ + GQGA+ +E + + +K I H DT +
Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEQVLRALKEIEHRDTLLAC 238
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAIN 287
ER+ + EL+G C I L V++ GK + + +A
Sbjct: 239 LAERSLMRELEGGCSVPIGVETKWADGKLRLRATVVSVTGKEGVDADVLETVTSEEEATE 298
Query: 288 IGRDAAQYIRFISNKNVFN 306
+G+ AQ + + +
Sbjct: 299 LGKRVAQDLVSRGADKILD 317
>gi|153813574|ref|ZP_01966242.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174]
gi|149830319|gb|EDM85411.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174]
Length = 312
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 154/297 (51%), Gaps = 6/297 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IG+R S LA+ + R + + H P ++ I+ + T GD+I +RTL ++GGKG
Sbjct: 7 KNKVIIGSRESRLAVLQSEMVRDYIKEQH--PGLDVEILTMKTTGDKILDRTLDKVGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++K L+ G +VHS KDMP ++ + L + A+ RED RDV + + D
Sbjct: 65 LFVKELDKALLEGRTMLSVHSLKDMPMEVPEDLPLLAFSRREDPRDVLVLPEGAASLDPL 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+G SSLRR L D+ V RG ++TRL KL+ + ++LA AG+KRL E
Sbjct: 125 --KPLGCSSLRRTLQLQTIYPDMKVKSIRGNLQTRLRKLDAGEYAGLILAAAGLKRLGLE 182
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
K I + ++ P+ GQG + ++ H E + ED W + ERAF+ LDG
Sbjct: 183 KRIHRYFSADEILPAAGQGILAVQGHKGLK--YEYLSGYKDEDAWIAGTAERAFVRYLDG 240
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C S +A F +G L+ G+ + + S G + +A +G A+ ++
Sbjct: 241 GCSSPVAAFGIVEGEELFLRGLYYREKDGRYFKDSIRGPKTEAARLGMCLAEQMKRE 297
>gi|148222555|ref|NP_001089699.1| hydroxymethylbilane synthase [Xenopus laevis]
gi|76780331|gb|AAI06358.1| MGC130905 protein [Xenopus laevis]
Length = 351
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 103/337 (30%), Positives = 146/337 (43%), Gaps = 35/337 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+GTR S LA L + + I+ +ST GD+I + L++IG K
Sbjct: 7 TKHVIRVGTRKSQLARIQTDSVVEMLSK--RFSSTHFEIVAMSTTGDKILDTALSKIGEK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H + L
Sbjct: 65 SLFTKELENALEKNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRFGNTL 124
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++
Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLRKLDEQEDFSAIILAAAGLR 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I +IL ++ + GQGA+ +E + +V + +T ERAF+
Sbjct: 185 RMGWENRIGQILTSDECLYAVGQGALAVEVRAKDQDILSMVSALQDPETVLRCVAERAFM 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNRCD-- 284
+L+G C +A K S LY G V + DG + G D
Sbjct: 245 KKLEGGCSVPVAVSTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPNDDVQ 304
Query: 285 ----------------AINIGRDAAQYIRFISNKNVF 305
A +G A + K +
Sbjct: 305 HVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 341
>gi|308184042|ref|YP_003928175.1| porphobilinogen deaminase [Helicobacter pylori SJM180]
gi|308059962|gb|ADO01858.1| porphobilinogen deaminase [Helicobacter pylori SJM180]
Length = 306
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANYIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLQRLN 175
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+
Sbjct: 176 VQGAKYRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I A G + ++ +GK + G++ A ++ ++ +
Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQS 294
Query: 300 SNKNVFN 306
K +
Sbjct: 295 GAKEILE 301
>gi|332764355|gb|EGJ94590.1| porphobilinogen deaminase [Shigella flexneri 2930-71]
Length = 273
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 97/263 (36%), Positives = 144/263 (54%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL +
Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TRL+KL+
Sbjct: 61 REDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ +N
Sbjct: 121 NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALN 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H +T V ERA L+G C+ I +A ++ +V A DG R G
Sbjct: 181 HHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAP 240
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
DA +G A+ + + +
Sbjct: 241 QDAEQMGISLAEELLNNGAREIL 263
>gi|330817976|ref|YP_004361681.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3]
gi|327370369|gb|AEA61725.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3]
Length = 323
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LAL A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLALWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G +S + RED RD F+S+ SL DL
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMSLPEGFVLSTVMSREDPRDAFVSNDYASLDDLPTG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GTSSLRR+A+L D V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AIVGTSSLRREAMLRAHYLDFDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++++E PP+ GQGA+ IE + + ++ T + ER L GSC
Sbjct: 191 IRALIDVETSPPAAGQGALGIEIAASRTDVARWLAPLHDSATALAAEAERMVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+A A G L G V + G V ++ +A+ +G+ + +
Sbjct: 251 SVPLAAHAIWHGERLELTGRVSNTSGTRVLTVRQDAAVTTPDEALALGKQVSDELERQGA 310
Query: 302 KNVFN 306
+
Sbjct: 311 FEIIE 315
>gi|296532729|ref|ZP_06895413.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
gi|296266947|gb|EFH12888.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 110/311 (35%), Positives = 157/311 (50%), Gaps = 10/311 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
P R+GTR SPLAL ++ + ++T GDRI ++ L +IGGKG
Sbjct: 56 PLRVGTRGSPLALWQTRTFLELVLHFCPVLRNAKAFEEHVIATSGDRIQDKRLADIGGKG 115
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
LF +EI + L+ G ID AVHS KD+ T+L G+ ++ L RED RD + + D
Sbjct: 116 LFAKEIHEALLDGRIDFAVHSLKDLETELPPGIVLACTLRREDARDTLVLGPGAADADPA 175
Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+ IGT+SLRR+A LL R D+ V RG + +RL KL + LLA AG
Sbjct: 176 DPFSAIPAGARIGTASLRRQAQLLHARPDLKVEMIRGNVGSRLAKLAGGECDGTLLALAG 235
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KRL E +L+ E P+ GQG + + + + EL+ I ERA
Sbjct: 236 LKRLGLESHASVVLDAEAMVPAAGQGIVGVTVRAADTELHELLSGIEDRTARAVSRAERA 295
Query: 236 FLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
LA LDGSC++ I G A G L+ G+V DG + S +G +A IGR+ +
Sbjct: 296 LLAALDGSCRTPIGGHARLLPGGELHLTGLVARPDGSFLLKRSLHGAAGEAERIGRELGE 355
Query: 295 YIRFISNKNVF 305
+R S ++F
Sbjct: 356 SLRADSPADIF 366
>gi|315925350|ref|ZP_07921561.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621251|gb|EFV01221.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 309
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 6/300 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +G+R S LA+ L H P + ++TKGDR ++ L IG KG
Sbjct: 1 MKKIVVGSRGSKLAVTQTNWLIERLAAAH--PDIAFELKIITTKGDRNQHQALDAIGDKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
LFT E+E +L+SGEI AVHS KDMP+ L +GL ++ RED DV ++ + D
Sbjct: 59 LFTAELEAELLSGEIQMAVHSMKDMPSALPEGLCLTVPPMREDPADVLVTPHGAASLDDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+VIG+ S RR L R D+ + RG I+TR+ KL + I+LA AG++RL
Sbjct: 119 PEGAVIGSGSKRRVFQLKALRPDLQTVGIRGNIDTRIRKLFDEHLDGIVLAAAGMRRLNV 178
Query: 182 EKVIKEILNI---EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L F P+P QG + +E +N + + L+ I+ E + ER+FL
Sbjct: 179 YDAADYHLVPLLPPAFVPAPAQGILAVEIREDNAEVKALMAAISDETARVQMAAERSFLT 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDG C I + G + YG+ G + S G DA +G A+ +R
Sbjct: 239 ALDGDCHLPIGAYCEAAGDAITLYGLYGDEAGTRLVKGSAAGRAADAERLGAQLAEQLRK 298
>gi|239637532|ref|ZP_04678504.1| porphobilinogen deaminase [Staphylococcus warneri L37603]
gi|239596750|gb|EEQ79275.1| porphobilinogen deaminase [Staphylococcus warneri L37603]
Length = 308
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 169/305 (55%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKQVR--PDLDIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L
Sbjct: 59 LFVKEIQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FLAE+D
Sbjct: 179 DDIVTTYLDKDILLPAIGQGALGIECRSDDEELLELLKEVHNKDVEKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + F G+++ DG +E + G +G++ ++ ++
Sbjct: 239 GSCQVPIGGYATINSQQQIEFTGLIMTPDGTERYEHTAIG--ESPTELGKEVSRVLKEQG 296
Query: 301 NKNVF 305
+
Sbjct: 297 AYEII 301
>gi|150865873|ref|XP_001385264.2| hypothetical protein PICST_47071 [Scheffersomyces stipitis CBS
6054]
gi|149387129|gb|ABN67235.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 372
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 150/319 (47%), Gaps = 17/319 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+IG R S LA+ + + + + P N I+ LST GD+I N+ L GGK
Sbjct: 23 TNHIQIGGRKSTLAVVQSEIVKKEIEEA--FPHINCSILALSTLGDKIQNKPLYSFGGKS 80
Query: 63 LFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---T 114
L+T+E+E L+ ++D VHS KDMPT L ++ L RED RD +
Sbjct: 81 LWTKELEILLLDSIDEFPQLDLIVHSLKDMPTNLPDEFELGCILKREDPRDALVMRAGSP 140
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLA 172
++L DL SV+GTSS+RR + L++ + RG ++TRL+KL++ I+LA
Sbjct: 141 YKTLDDLPAGSVVGTSSIRRSSQLVKNYPHLKFDSVRGNLQTRLSKLDDDSQPFECIILA 200
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ R+ + + LN + GQGA+ +E N+ K + ++ I+H T
Sbjct: 201 SAGLIRVGLGHRVTDYLNAPHMYYAVGQGALGVEIRKNDTKMKNILAKISHIPTSLCCYA 260
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRC---DAIN 287
ER+ + L+G C I + L F I+++ DG F E A
Sbjct: 261 ERSLMRYLEGGCSVPIGVHTNYDEDSKVLKFEAIIVSPDGTQFVEDELEAQVETLQQAEA 320
Query: 288 IGRDAAQYIRFISNKNVFN 306
+G + K++ +
Sbjct: 321 LGIQLGDRLIAKGAKDILD 339
>gi|326792716|ref|YP_004310537.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427]
gi|326543480|gb|ADZ85339.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427]
Length = 301
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL L + P + + TKGD I ++ L +IG KG+F
Sbjct: 2 KVVIGTRGSRLALTQTKWVIDELEKHY--PELACEMKIIKTKGDLIQDKPLDKIGDKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLAL 123
T+EIE +L+ G ID AVHS KDMP++L GL+ + L RED RDV I S++DL +
Sbjct: 60 TKEIEAELLKGNIDMAVHSMKDMPSELPLGLRFTRTLKREDARDVLILKEGYASIEDLPI 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ I T S RRK LL +RSD++++ RG ++TRL KL K I+LA AG+ RL
Sbjct: 120 GATIATGSKRRKYQLLAYRSDLNIVPIRGNVDTRLCKLEEEKLEGIVLAAAGLHRLGLAD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I L +E P+P QGA+ IE + KA +LVKV+ + V ERAF+ ++G
Sbjct: 180 KITCYLPMEIMLPAPAQGALAIEIRQEDTKAYDLVKVLEDPVSSIQVEAERAFMDAINGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C I + G+ L G++ GK +G + A +R KN
Sbjct: 240 CHMPIGAYCEVIGTKLRMRGLLGDELGKKLVIKELCAPIGSEKQLGEELASVLRKEFEKN 299
Query: 304 VFNF 307
++
Sbjct: 300 --DW 301
>gi|240141705|ref|YP_002966185.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens AM1]
gi|240011682|gb|ACS42908.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens AM1]
Length = 294
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 3/292 (1%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L +
Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHSVIGTSSLR 133
EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL + +GTSSLR
Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+
Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMADVARSVLSVEE 178
Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A
Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238
Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
KG + G++ DG V R G DA IGR+A ++ + F
Sbjct: 239 VKGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGREAGAELKRAAGDVYF 290
>gi|317008888|gb|ADU79468.1| porphobilinogen deaminase [Helicobacter pylori India7]
Length = 306
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 97/303 (32%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIQERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 120 AKVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ ++ + K
Sbjct: 239 CQIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLIQELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|313905566|ref|ZP_07838929.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6]
gi|313469629|gb|EFR64968.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6]
Length = 299
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 92/307 (29%), Positives = 147/307 (47%), Gaps = 11/307 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME IGTR S LAL L + + P ++ ++ ++T GDRI +R L +IGG
Sbjct: 1 MENNRIIIGTRESRLALVQTGMVADFLREKY--PERSVELLKMTTTGDRILDRRLDQIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L +GE D VHS KD+P +L + L + RED RDV + + D
Sbjct: 59 KGLFVKELDRALAAGECDLCVHSMKDLPMELPEELPLLGCSRREDPRDVLVLPAGRKEPD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
IGTSS RR + + D RG ++TRL KL+ ++LA AG+KR+
Sbjct: 119 --PSLPIGTSSRRRILQVQKLYPDAKFESVRGNLQTRLKKLDEGLYGGLILAAAGLKRMG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + E+ P+ GQG + I+ + + T + ERAF+ L
Sbjct: 177 LENRISRYFSTEEVIPAAGQGVLAIQGRADTYDFD--LDGFIDPGTMLATLAERAFVRRL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIR 297
+G C +A + G +L G+ + ++ R+ + +A +GR A+ +
Sbjct: 235 NGGCSLPVAAYGEFDGESLALRGLYYDEEKRVSRTEERSAIVRTKEEAEALGRGLAEQLI 294
Query: 298 FISNKNV 304
+ +
Sbjct: 295 P--GREI 299
>gi|330684284|gb|EGG96022.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU121]
Length = 298
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 168/301 (55%), Gaps = 6/301 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKG
Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKQVR--PELDIEIKEIVTKGDRIVDKQLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EI+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L
Sbjct: 59 LFVKEIQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
S+IGTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+
Sbjct: 119 EGSIIGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWS 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ L+ + P+ GQGA+ IE ++ + +L++ ++++D V ER FLAE+D
Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDKELLDLLQEVHNKDVEKCVTAERTFLAEMD 238
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
GSC+ I G+A + F G+++ DG +E + G +G++ ++ ++
Sbjct: 239 GSCQVPIGGYATINSQQQIEFTGLIMTPDGTERYEHTAIG--ESPTELGKEVSRVLKEQG 296
Query: 301 N 301
Sbjct: 297 A 297
>gi|54020779|ref|NP_001005635.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis]
gi|49250823|gb|AAH74624.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis]
Length = 351
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 103/337 (30%), Positives = 146/337 (43%), Gaps = 35/337 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+GTR S LA L + P + I+ +ST GD+I + L++IG K
Sbjct: 7 NKHVIRVGTRKSQLARIQTDSVVEMLSK--RFPSTHFDIVAMSTTGDKILDTALSKIGEK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H + L
Sbjct: 65 SLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRYGNTL 124
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
SVIGTSSLRR A L + + D RG + TR+ KL+ AI+LA AG++
Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAAAGLR 184
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + I +IL ++ + GQGA+ IE + +V + +T ERAF+
Sbjct: 185 RMGWKNRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAERAFM 244
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNRCD-- 284
L+G C +A K S LY G V + DG + G D
Sbjct: 245 KRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPNDDVQ 304
Query: 285 ----------------AINIGRDAAQYIRFISNKNVF 305
A +G A + K +
Sbjct: 305 HVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 341
>gi|126348046|emb|CAJ89766.1| putative porphobilinogen deaminase [Streptomyces ambofaciens ATCC
23877]
Length = 311
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PGVRTEVVPVKTTGDKWLG-DLSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+S E D AVH KD+P L G +A+L R+D+RD I +L +L
Sbjct: 64 KEVDAALLSDEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPDGLTLDELPA 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ +
Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVAGLERIGRRD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + H T + ER FL L G
Sbjct: 184 VISEVLSPETMMPPIGAGILALQCREGDTDLIEAVSGLGHPATHREASAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A G L V DGK R D +G A + +
Sbjct: 244 CNSPIAGYARVDRGGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 EIID 307
>gi|208434184|ref|YP_002265850.1| porphobilinogen deaminase [Helicobacter pylori G27]
gi|226706288|sp|B5ZA04|HEM3_HELPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|208432113|gb|ACI26984.1| porphobilinogen deaminase [Helicobacter pylori G27]
Length = 306
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
+GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLEREFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ +D + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQDLLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|148544908|ref|YP_001272278.1| porphobilinogen deaminase [Lactobacillus reuteri DSM 20016]
gi|184154245|ref|YP_001842586.1| porphobilinogen deaminase [Lactobacillus reuteri JCM 1112]
gi|227364048|ref|ZP_03848148.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3]
gi|325683253|ref|ZP_08162769.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A]
gi|167008814|sp|A5VM67|HEM3_LACRD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229836109|sp|B2G9H4|HEM3_LACRJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|60172703|gb|AAX14537.1| HemC [Lactobacillus reuteri]
gi|148531942|gb|ABQ83941.1| hydroxymethylbilane synthase [Lactobacillus reuteri DSM 20016]
gi|183225589|dbj|BAG26106.1| porphobilinogen deaminase HemC [Lactobacillus reuteri JCM 1112]
gi|227070970|gb|EEI09293.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3]
gi|324977603|gb|EGC14554.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A]
Length = 305
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 161/301 (53%), Gaps = 7/301 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +G+R S LA+A +SL + P I + T+GDR + +L +IGG
Sbjct: 1 MTNKVI-VGSRKSKLAMAQTELVIASLEKI--FPDIKFEIKNVITEGDRNRHVSLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLK 119
KG+F +EIE +L G ID AVHS KD+ L + L + A+ R D +S SL
Sbjct: 58 KGVFVKEIEDELKDGTIDFAVHSLKDVMPILPEELVLGAFPKRVSPYDCLVSRKNLSSLN 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + IGT+SLRR+ LL R D+ +I RG I+TRL K++ I+LA AG+ RL
Sbjct: 118 DLPKGARIGTNSLRRQGQLLSIRPDLKIIPIRGNIDTRLRKIDTEALDGIILAEAGLTRL 177
Query: 180 KKEKVIKEILNIEDF-PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ +L+++++ P+ GQG + IE N+ + ++++ IN E++ V ER F+
Sbjct: 178 NIDLSSYHVLDLQNYIMPAVGQGCLAIECRKNDTRIRKMLDQINDEESAYCVQVEREFMR 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL GSC I G AY K + F G++ + +G+ + ++ + +G+ A +
Sbjct: 238 ELGGSCNFPIGGHAYAKNGQILFDGLIASPNGEHVIKETKI--PANNSGVGKKVADQLLA 295
Query: 299 I 299
Sbjct: 296 K 296
>gi|310826391|ref|YP_003958748.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium
limosum KIST612]
gi|308738125|gb|ADO35785.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium
limosum KIST612]
Length = 804
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 6/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LA+ L + P + + + TKGD+I ++ L +IG KG+F
Sbjct: 2 KIIVGSRGSKLAVVQTNWLLEELRKAN--PEVDFELKIIKTKGDKIQHKALDKIGDKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123
T+E+E L+SGEID AVHS KDMP+ L GL +S RED RDV + H ++++L
Sbjct: 60 TKELEDALLSGEIDMAVHSMKDMPSALPDGLTLSVPPMREDPRDVLLTPHKISAIQELPE 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
++VIGT S RR L R D V+ RG I+TR+ K+ I+LA AG+KR+ +
Sbjct: 120 NAVIGTGSKRRIYQLKNIRKDFEVVGIRGNIDTRIRKMKEQGLDGIILAAAGLKRIGVYE 179
Query: 184 VIKEIL---NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ F +P QG + +E +N + L++ +++ T + ER FL L
Sbjct: 180 SGDYTCLPLDPCQFVSAPAQGILAVEIREDNETVKALMESVSNPVTKAQMTAERQFLISL 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+GSC I + +G L YG+ DG I ++ G + +G A+ ++ +
Sbjct: 240 NGSCHIPIGAYCNVEGEKLTLYGLFGNEDGTILYKGQTEGAMGEEAKMGDRLAKELKEMV 299
Query: 301 NKNV 304
+
Sbjct: 300 EAKI 303
>gi|296274257|ref|YP_003656888.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299]
gi|296098431|gb|ADG94381.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299]
Length = 312
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 6/307 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL + ++ L+ + P I + STK D+I + L +IGGKG
Sbjct: 1 MKKIVIATRKSKLALWQSEYIKAELLKHY--PDMVIELKTFSTKADKILDVPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E L + E D AVHS KD+P + +G ++A R D RD F+S S+ DL
Sbjct: 59 LFTKELEIALENKEADIAVHSLKDVPVEFEEGFVLAALTKRFDPRDAFLSEKYASITDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGT+SLRR+ L R DI + D RG I TR+ KL + AI+LA G+++L+ E
Sbjct: 119 NGAIIGTTSLRRRMELKLLRPDIELKDLRGNINTRIAKLKAGEYDAIILAATGVQKLQIE 178
Query: 183 KVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+K I++ PS GQ + IET +NP+ E++ V++ ++ ER+F+ L
Sbjct: 179 DEVKYFTPISIDEMIPSMGQATLGIETL-DNPELVEILSVLHDKNAEIESTIERSFVHTL 237
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ I A +++ IV DG + + N D G+ AQ
Sbjct: 238 EGGCQVPIGVKATILDENSVDVRAIVGMPDGSEYVQEDIKINIDDYKTAGQALAQTFIDQ 297
Query: 300 SNKNVFN 306
K +
Sbjct: 298 GAKELLE 304
>gi|289423443|ref|ZP_06425247.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L]
gi|289156201|gb|EFD04862.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L]
Length = 307
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 9/302 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LA+ ++ ++ I +STKGDRI +++L +IG KG+F
Sbjct: 2 KLIVGTRGSKLAVTQTKIVVDAIKS--NFENIDVDIKIISTKGDRILDKSLDKIGDKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122
T+EIE++LI GEID A+HS KDMP++L +GL ++ + RED RD+ I ++ D
Sbjct: 60 TQEIERQLIEGEIDFAIHSLKDMPSELGEGLVLTKTIQREDPRDLLILNSKFKKIDDPIK 119
Query: 123 -----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
IGT S RR A LL ++ + RG I+TRL K+ AI+LA AG+
Sbjct: 120 WLKENDGMRIGTGSKRRSAQLLNINPNLKIDLIRGNIDTRLEKMEKESYDAIVLAAAGVN 179
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RLK + + +L+ P+ GQGA+ IE N + + + I+ + V ER +L
Sbjct: 180 RLKMDWINSYVLDEGSMIPAVGQGALAIEIKEGNQELVNIFEAISDDIANVCVEAERTYL 239
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
A ++G C + A L GI + D K+ S G DA IGR+ A I
Sbjct: 240 ATINGGCHMPVGALAQVNEGKLCLKGIYGSEDCKLIISSSLEGPLEDAQRIGRELADKIL 299
Query: 298 FI 299
Sbjct: 300 RE 301
>gi|157164515|ref|YP_001466695.1| porphobilinogen deaminase [Campylobacter concisus 13826]
gi|259647804|sp|A7ZD37|HEM3_CAMC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112800491|gb|EAT97835.1| porphobilinogen deaminase [Campylobacter concisus 13826]
Length = 309
Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 156/305 (51%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +I TR S LAL + ++ + HK +V+ + TKGD I + L +IGGKG
Sbjct: 1 MKEIKIATRKSILALWQSEHIKARIEAQHK--GMKVVLEGMKTKGDVILDTPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ GE D AVHS KD+P +GL+++A RED RD IS DL
Sbjct: 59 LFTKELEDSMLKGETDIAVHSLKDVPVVFPEGLRLAAICSREDTRDAMISEKFAKFSDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI--KRLK 180
+ +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AGI +K
Sbjct: 119 HGAKVGTTSLRRKMQLLIMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNIK 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E ++ P+ GQGA+ IE + + + +N E+ ER F++ L
Sbjct: 179 AEVAHIYTFGFDEMIPAMGQGALGIEAR-DEKQILDETSFLNDENAVIETTIERDFVSVL 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A KG + IV DG + + S ++ ++G++ A
Sbjct: 238 EGGCQVPIGISARLKGDEISIDAIVGLPDGSEYIKDSLKTSKDKFQSVGKELAHKFIEKG 297
Query: 301 NKNVF 305
+ +
Sbjct: 298 ARELL 302
>gi|160897675|ref|YP_001563257.1| porphobilinogen deaminase [Delftia acidovorans SPH-1]
gi|160363259|gb|ABX34872.1| porphobilinogen deaminase [Delftia acidovorans SPH-1]
Length = 312
Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 152/301 (50%), Gaps = 13/301 (4%)
Query: 1 MEKKP-----FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL 55
M KP I TR S LAL A ++ L H + ++ ++TKGD+I +RTL
Sbjct: 1 MNTKPLLPHSIVIATRESQLALWQAEHVQALLRAR----GHEVELLGMTTKGDQILDRTL 56
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
+++GGKGLF +E+E L G AVHS KD+P +L +G ++ + RED RD F+S+
Sbjct: 57 SKVGGKGLFVKELEVALEEGRAHIAVHSLKDVPMELPEGFVLACVMEREDPRDAFVSNRY 116
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+L +L +V+GTSSLRR+ALL R D+ + RG + TRL KL+ AI+LA AG
Sbjct: 117 ATLAELPQGAVVGTSSLRRQALLQALRPDLKIEPLRGNVNTRLRKLDEGHYDAIVLAAAG 176
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL I+ P+ GQGA+ IE + + + + H+ TW +V ERA
Sbjct: 177 LMRLGLADRIRARFEPTGMLPAAGQGALGIEVRADRQDLIDALAPLAHQTTWLTVTAERA 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRD 291
+ GSC +A G L G+ +V + D A +G+
Sbjct: 237 VSRCMGGSCSMPLAAHGTFDGRQLRLDAAWGDPQGRLPLVQVHADATVTDFASADALGQH 296
Query: 292 A 292
Sbjct: 297 V 297
>gi|254564213|ref|YP_003071308.1| Porphobilinogen deaminase [Methylobacterium extorquens DM4]
gi|254271491|emb|CAX27506.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens DM4]
Length = 294
Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 3/292 (1%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L +
Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHSVIGTSSLR 133
EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL + +GTSSLR
Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+
Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMANVARSVLSVEE 178
Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A
Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238
Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G + G++ DG V R G DA IGRDA ++ + F
Sbjct: 239 VSGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGRDAGAELKRAAGDVYF 290
>gi|117927446|ref|YP_871997.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B]
gi|254800230|sp|A0LRF1|HEM3_ACIC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|117647909|gb|ABK52011.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B]
Length = 331
Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 8/304 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A E +L + I+ + + GDR + L E G G+F
Sbjct: 10 LRLGTRRSTLARAQTEEIAGALRAA----GCRVEIVGIQSTGDRHADVPLHEFAGSGVFV 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+ L+ GE+D VHS KD+PT + L I+A R D RD ++ L +L +
Sbjct: 66 AELRAALLRGEVDVVVHSMKDLPTAEIPELAIAAIPRRADPRDALVTGAGCRLAELPTGA 125
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR A L R D+ + RG ++TRL KL+ A+++A AG+ RL + +
Sbjct: 126 IVGTGSPRRAAQLRLLRPDLEIRPIRGNLDTRLGKLHAGGYAALIVAAAGLARLHRSEEA 185
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNP----KAQELVKVINHEDTWDSVNCERAFLAELD 241
E + P+PGQGA+ +E + + ++ ++ T +V ERA LA +
Sbjct: 186 AEFFDPTVMLPAPGQGALAVECRRADIADGGRLAGILAGLDDPATRAAVTAERALLAAVG 245
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + TL +V+ G S G DA ++GR A +
Sbjct: 246 AGCSAPVGALGVVTADTLQLDAVVVDPSGTTAFRRSLTGTPDDASDLGRRLAADLIRAGA 305
Query: 302 KNVF 305
+
Sbjct: 306 DQLL 309
>gi|238916686|ref|YP_002930203.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750]
gi|259647796|sp|C4Z552|HEM3_EUBE2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238872046|gb|ACR71756.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750]
Length = 295
Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 101/293 (34%), Positives = 149/293 (50%), Gaps = 7/293 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
RIGTR S LAL + + + + + P ++ + T GD++T++ L IG KG F +
Sbjct: 4 RIGTRGSKLALVQSEYVKRRMEEAY--PEDTFELVIIKTTGDKVTDKPLAAIGTKGFFVK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L+SG ID AVHS KDMP + GL + RED RDV I TA S +L +V
Sbjct: 62 EIEEALLSGSIDMAVHSMKDMPAECAAGLTFAKAWKREDCRDVLILKTAGSFSELPSGAV 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKV 184
IGT SLRR L R DI RG ++TR+NKL ++ I+LA AG+ RL +
Sbjct: 122 IGTGSLRRACQLAMLRPDIQFTAIRGNVDTRINKLMDDSYGLDGIVLAAAGLNRLGRSSE 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ E P+P QG + IET N + + + ++ +++ ER FL G C
Sbjct: 182 ITEYLDPEVVIPAPAQGVLAIETAEVNTELLDKINALSDDNSDREAVAERTFLRLTGGGC 241
Query: 245 KSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + K + L + D + G D+ +G +AA+ +
Sbjct: 242 HAPVGAHCVTKDNGDLRMVVLFGNDDCSRILRIEVTGT--DSEAVGHEAARML 292
>gi|313205044|ref|YP_004043701.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4]
gi|312444360|gb|ADQ80716.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4]
Length = 306
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 155/308 (50%), Gaps = 6/308 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK F + TR S LA +T L K P I+ +ST GD +T++ LT GG
Sbjct: 1 MSKK-FVVATRPSLLAYTQTQQTVDLLRV--KNPDCEFEIVKISTHGDTVTDKPLTAFGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F +E+E L G+ A+HS KD+P+ +GL ++A+ R+D RD+ ++ S+ D
Sbjct: 58 TGVFVKELENALYEGKAHFAIHSLKDVPSIQPEGLVLAAFPTRQDPRDLLLTRGGVSVAD 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L VIGT S RR + + + I+ D RG I+TRL KL + + AI+LA AG+KRL
Sbjct: 118 LPSPCVIGTGSPRRMVQVAKLKEQITFADLRGNIDTRLKKLEDGQYDAIVLAAAGLKRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
KE + + P+ GQGAI IE ++ + ++K IN T ++ ER+++ +
Sbjct: 178 KEIAESAYMPTDVCLPAIGQGAIAIECRADDAETIAMLKSINDAATETAIVAERSYMKTI 237
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G CK + +A + + + ++ + DA +G+ + I +
Sbjct: 238 GGGCKFPLGAYATVESDEVNLHVMLGNHHTGQIIRMHETSTVADAEKLGQKLGEAIIAEA 297
Query: 301 NK---NVF 305
K +
Sbjct: 298 EKQGIEIL 305
>gi|323489960|ref|ZP_08095181.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2]
gi|323396256|gb|EGA89081.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2]
Length = 309
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 169/304 (55%), Gaps = 5/304 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL + L P I + TKGDRI + L+++GGKG
Sbjct: 1 MRKIIVGSRRSKLALTQTNQFIDKLKAAGA--PFEFEIKEIVTKGDRIVDVMLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ L EID AVHS KDMP+ L +GL I RED RD +I++ L DL
Sbjct: 59 LFVKEIEQALFDREIDFAVHSMKDMPSVLPEGLAIGCIPEREDPRDAYIANDHVKLLDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
+ +V+GTSSLRR + LL R D+ + RG I+TRL KL + AI+LA AG+KR+
Sbjct: 119 VGAVVGTSSLRRSSQLLLLRPDLDIQWIRGNIDTRLAKLKSGDFDAIILAAAGLKRMGWK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ E L +++ P+ GQG++ IE + + + +NHEDT +VN ER FL ++D
Sbjct: 179 DDLVTEFLEVDECLPAIGQGSLGIECREEDTELLSELAKLNHEDTALAVNAERKFLKDMD 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSC+ IAG+A K + F G++ + + + + D I GR A+ I
Sbjct: 239 GSCQVPIAGYATVKDGEVTFTGLISSPEADQVFKEMAISH--DPIEAGRIVAEKISAQGG 296
Query: 302 KNVF 305
++
Sbjct: 297 YDLI 300
>gi|16124327|ref|NP_418891.1| porphobilinogen deaminase [Caulobacter crescentus CB15]
gi|221233009|ref|YP_002515445.1| porphobilinogen deaminase [Caulobacter crescentus NA1000]
gi|24211766|sp|Q9ABZ8|HEM3_CAUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800240|sp|B8GXG1|HEM3_CAUCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|13421169|gb|AAK22059.1| porphobilinogen deaminase [Caulobacter crescentus CB15]
gi|220962181|gb|ACL93537.1| porphobilinogen deaminase [Caulobacter crescentus NA1000]
Length = 322
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 119/320 (37%), Positives = 169/320 (52%), Gaps = 16/320 (5%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIV----IIPLSTKGDRIT 51
M ++P RIG R S L+LA + ++ + +P I +IP+ T GDRI
Sbjct: 1 MSRQPPIRIGARGSKLSLAQSGLMQARIAHALGVPAGASKDEIEAAAPLIPIVTSGDRIQ 60
Query: 52 NRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111
+R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FI
Sbjct: 61 DRRLMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFI 120
Query: 112 SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171
SH + L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILL
Sbjct: 121 SHVCERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILL 180
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A +G+ RL + + L+ + PP+PGQGA+ IET ++ + T +V
Sbjct: 181 AQSGLNRLGLGHLTRSWLDPDACPPAPGQGALVIETR-AEDIGAPWLEAVRCRQTTIAVA 239
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN------GNRCDA 285
ER L L+GSC++AI A G+ L L DG + + +A
Sbjct: 240 AERGALLALEGSCRTAIGARAILDGARLSMIVEALTPDGAQRFRREGDITLTGADDIAEA 299
Query: 286 INIGRDAAQYIRFISNKNVF 305
G +R +
Sbjct: 300 RAFGLTLGAEVRAAGGDAII 319
>gi|331085795|ref|ZP_08334878.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406718|gb|EGG86223.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 292
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 7/298 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGK
Sbjct: 1 MKRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + A+ ++
Sbjct: 59 GLFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLV--PAKGKENW 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL
Sbjct: 117 NGQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGL 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LD
Sbjct: 177 EERIERYFSPEEILPAAGQGILVVQ---GREEMRELVKKLQPEEMEVIAENERAFVRRLD 233
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C S +A + + L G+ D + ++ + ++G + A +R
Sbjct: 234 GGCSSPVAAYGRIEQDELVLTGLYYEEDTGNYVIATKRAEVRASAHLGWELADELRTK 291
>gi|319760696|ref|YP_004124634.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF]
gi|318039410|gb|ADV33960.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF]
Length = 310
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR S LA+ + + L H P I ++P+ T GD+ N T
Sbjct: 1 MNTKFLRIATRKSRLAICQSEYVCNELKRFH--PNIKIKLVPIVTTGDKFFNSTTKIKIK 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG F +E+E LI D AVHS KDM L L + R D RD F+S ++
Sbjct: 59 KGAFIKELEYALIENRADIAVHSMKDMTASLPNELILPILCKRIDPRDAFVSIKYSNIDM 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S+IGTSSLRR+ + RSD+++ + RG I+TR+ KL+ K AI+LA AG+ RL
Sbjct: 119 LPSGSIIGTSSLRRQCQIQARRSDLTLHNLRGNIDTRIKKLHQGKYDAIILAVAGLNRLH 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IK +N +D P+ GQGAI IE + L+ + H++T + ERA L
Sbjct: 179 LTQYIKTYINPKDLLPAMGQGAIAIECRKKDIDTLSLLSPLYHQETSLRIQSERAVTTYL 238
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C+ IA ++ ++ ++ DG A +G A+ +
Sbjct: 239 EGYCQFPIASYSEIHNHQIWLRALIGLPDGSKIIRTEGRAPFDQAEKLGLFLAKKLLNQ 297
>gi|307293495|ref|ZP_07573339.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1]
gi|306879646|gb|EFN10863.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1]
Length = 308
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 123/312 (39%), Positives = 167/312 (53%), Gaps = 20/312 (6%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L EI
Sbjct: 1 MQKPFRPLRLGTRGSPLALAQAHMTIAALRARHGWDEGAVEIVVVQTSGDRIQDRALAEI 60
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGK L+T+E+++ L+ GEID AVHS KD+ T ++I+A LPR D+RD + A S
Sbjct: 61 GGKALWTKELDRALLEGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLV--GAASF 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L V+GTSS RR A + R R D V+ FRG + TRL KL +AHA LLA AG+ R
Sbjct: 119 DALPEKPVVGTSSPRRAAQVKRLRPDAGVVLFRGNVATRLAKLEKGEAHATLLAAAGLDR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + V + E P+P QGA+ IET N +L+ IN DT+D V ERA L
Sbjct: 179 LGQSDVGV-AIPAEVMLPAPSQGAVGIETLSGNGAMLDLLATINDADTFDCVMAERAVLV 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQY 295
L G+C S IA + +Y +++ DG+ S R D A +GR
Sbjct: 238 GLGGTCHSPIAALGRLEEGRIYLRAEIISPDGQETIGDSLRIERNDVATAEAMGR----- 292
Query: 296 IRFISNKNVFNF 307
+ +
Sbjct: 293 -------GLLEW 297
>gi|262038272|ref|ZP_06011662.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264]
gi|261747739|gb|EEY35188.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264]
Length = 316
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 113/318 (35%), Positives = 163/318 (51%), Gaps = 22/318 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44
M+ IGTR S LALA A + + L+ + K I + +
Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIAKYDELRKKEDFKGISDFNKNESLTIELKIIV 60
Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101
T GD+ R +I G K LF +EIEK+++ +ID AVHS KDMP + +GL + +
Sbjct: 61 TTGDKDL-RDFDKIKGTTQKELFVKEIEKEMLENKIDFAVHSLKDMPQQTPEGLLNACFP 119
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
RED RDV +S + + L +L SVIGT S+RR+ LL R DI + RG I TRL KL
Sbjct: 120 LREDNRDVIVSKSGKKLNELREKSVIGTGSIRRETELLNLRKDIIIKPIRGNIHTRLKKL 179
Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
+N + AI+LA AG+KR I E E F P+PGQG +CI+ N+ + +EL+++I
Sbjct: 180 DNGEYDAIILAAAGLKRTGLSDRITEYFEDEVFMPAPGQGILCIQCRENDDRIRELLEII 239
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
N ++ ER F DG C + I + +G+TL G V DGK G+
Sbjct: 240 NDKEVGIMCETEREFSRIFDGGCHTPIGCSSTIEGNTLKLKG-VYNKDGKRIFS-EIEGD 297
Query: 282 RCDAINIGRDAAQYIRFI 299
+ + I + A+ I+
Sbjct: 298 KNNPKEIAQKLAKEIKNN 315
>gi|302896420|ref|XP_003047090.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728018|gb|EEU41377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 334
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 152/317 (47%), Gaps = 15/317 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K +GTR SPLALA +L + P H I ++T GDR N L GGKG
Sbjct: 7 KNVINVGTRKSPLALAQTNIVVDALKA--QFPDHEFPIHGMTTTGDRDQNTALYNFGGKG 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTA 115
L+T ++E++L++ E+D VHS KDMPT L +G + RED RD + H
Sbjct: 65 LWTSQLEERLVNKELDLVVHSLKDMPTSLPEGCVLGCVTSREDPRDTLVIKKSLQEKHGW 124
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYA 174
++L DL S+IGTSS+RR A L+R + D RG I+TRL KL ++ I+LA A
Sbjct: 125 KTLADLPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLQKLEDDPELTGIILAAA 184
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G++R+ I + L + + GQGA+ +E ++ K + +K I +E T +
Sbjct: 185 GLQRMDLGHHISQFLESDTGGILHAVGQGALGVECRADDEKVLKFLKTIENEQTMLACEA 244
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIG 289
ERA + L+G C I L V++ G + +A G
Sbjct: 245 ERAVMRALEGGCSVPIGVETKWVDGKLRLRATVVSLRGDEGVDAEMTEEIKTQEEADTFG 304
Query: 290 RDAAQYIRFISNKNVFN 306
+ A+++ + +
Sbjct: 305 KKVAKHLVDQGAGKILD 321
>gi|209147746|gb|ACI32904.1| Porphobilinogen deaminase [Salmo salar]
Length = 359
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 106/284 (37%), Positives = 145/284 (51%), Gaps = 6/284 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LA L ++ P +I I+ ++T GD+I + L++IG K L
Sbjct: 17 RVIRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGMTTTGDKILDTALSKIGEKSL 74
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H K L
Sbjct: 75 FTKELETALERNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPQNMGKSLDT 134
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++R+
Sbjct: 135 LPDKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKGDFSAIILAAAGLRRM 194
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E + +IL ED + GQGAI IE + E+V V++ +T ERAFL
Sbjct: 195 GWESRVSQILGPEDCMYAVGQGAIAIEVRAKDKDILEMVSVLHDPNTVLRCIAERAFLRR 254
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
L+G C +A K S LY G V + DG + + +
Sbjct: 255 LEGGCSVPVAVHTEVKDSQLYLTGAVYSLDGSDSLKETMQTSIA 298
>gi|217031453|ref|ZP_03436958.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128]
gi|298736817|ref|YP_003729347.1| hydroxymethylbilane synthase [Helicobacter pylori B8]
gi|216946653|gb|EEC25249.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128]
gi|298356011|emb|CBI66883.1| hydroxymethylbilane synthase [Helicobacter pylori B8]
Length = 306
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + T GD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G ID AVHS KD+P KGL ++ R D RD F+S L L +
Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADARDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184
+GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL +
Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPVGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|167767183|ref|ZP_02439236.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1]
gi|167711158|gb|EDS21737.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1]
gi|291559492|emb|CBL38292.1| porphobilinogen deaminase [butyrate-producing bacterium SSC/2]
Length = 780
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 109/298 (36%), Positives = 154/298 (51%), Gaps = 4/298 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF
Sbjct: 2 KYIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L
Sbjct: 60 VKEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E V
Sbjct: 120 AVIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDV 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC
Sbjct: 180 ITQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+ Y + DG G + + A + I+
Sbjct: 240 HTPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGTC--PEILAQTAVKNIKKQLAG 295
>gi|15611292|ref|NP_222943.1| porphobilinogen deaminase [Helicobacter pylori J99]
gi|11133270|sp|Q9ZMJ7|HEM3_HELPJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4154748|gb|AAD05809.1| PORPHOBILINOGEN DEAMINASE [Helicobacter pylori J99]
Length = 306
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I + T GD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECS---MESEIRIVKTTGDKILDAPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL
Sbjct: 116 LPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++++ PS GQGA+ +E N+ L + +N+E++ + ER F+
Sbjct: 176 VQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITL-QKLNNEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I A G + ++ +GK + G++ A ++ ++ +
Sbjct: 235 LNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQS 294
Query: 300 SNKNVFN 306
K +
Sbjct: 295 GAKEILE 301
>gi|167042167|gb|ABZ06900.1| putative porphobilinogen deaminase, dipyromethane cofactor-binding
domain protein [uncultured marine crenarchaeote
HF4000_ANIW93H17]
Length = 311
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F +GTR S L+LA S L K P I ++TKGD T R L I KG+F
Sbjct: 2 TFLVGTRGSNLSLAQTNWVISELQK--KNPSSEFEIKTITTKGDTDT-RALFTIDQKGIF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L
Sbjct: 59 EKEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGSNLKTIQLS 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL + V
Sbjct: 119 AVVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGLD-V 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C
Sbjct: 178 KHSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIEAERALSDYVESGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A L + DGKI ++ + G+ + N+G++ + ++ +
Sbjct: 238 RFPVGALAIANSGMLKLTVSAYSVDGKISIKLEKTGDVDNPKNLGQELGKELKKSGIAEI 297
Query: 305 -FNF 307
N+
Sbjct: 298 ASNW 301
>gi|158520980|ref|YP_001528850.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3]
gi|226740631|sp|A8ZWG5|HEM3_DESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158509806|gb|ABW66773.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3]
Length = 310
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 153/303 (50%), Gaps = 7/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ L I+P+ T+GD++ N + +IG KG+FT
Sbjct: 3 IRIGSRKSSLAMWQTCYVEDKLKQ----SGITTSILPIDTRGDQVLNVAIAKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124
EE+E KL G+ID AVHSAKDMP+ L G ++ A+ RE+ DV + + D +
Sbjct: 59 EELEAKLADGDIDIAVHSAKDMPSVLPDGFELIAFTDREEPADVLVSHKKDLDISDSSRP 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RR+ALL R+ + +D RG ++TR+ K+ AIL+AYAGI R+ + +
Sbjct: 119 VTIGTSSVRRQALLGRFYPHVRTVDIRGNVQTRVLKMKEGLCDAILMAYAGIHRMGMDDL 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + + F P GQG I +E K + + INH + + ERAFL L+G
Sbjct: 179 IVHTFSPDTFIPPVGQGCIAVEASSRLAAEKKEAIRACINHPASETCLLAERAFLKRLEG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C A G L G +++ DGK F +R G A IG D ++
Sbjct: 239 GCSIPAFALARLNGDRLTLSGGLMSLDGKKFIFNTRAGAGSQATAIGTDLGNHVLENGGA 298
Query: 303 NVF 305
+
Sbjct: 299 ALL 301
>gi|257459674|ref|ZP_05624783.1| porphobilinogen deaminase [Campylobacter gracilis RM3268]
gi|257443099|gb|EEV18233.1| porphobilinogen deaminase [Campylobacter gracilis RM3268]
Length = 309
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 149/305 (48%), Gaps = 7/305 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL + S L + + TKGD+I + L +IGGKG
Sbjct: 1 MKNLIIATRGSVLALWQSKHIASLLNAR----GIQAQLKSMKTKGDKILDTPLAKIGGKG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ GE AVHS KD+P + +GL ++A RED+RD IS +L
Sbjct: 57 LFTKELEESMLRGESHIAVHSLKDVPVEFPQGLVLAAICAREDVRDAMISEKYSKFDELP 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180
+ +GT+SLRRK LL R D+ VI RG ++TRL KL + + AI+LA AGI RL
Sbjct: 117 RGAKVGTTSLRRKMQLLSMRPDLEVISLRGNVQTRLRKLKDGEFDAIILAMAGINRLNLR 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I P+ GQGA+ IE + P+ ++ + E ER F+ L
Sbjct: 177 AEVKHVAPFEISQMIPAMGQGALGIEAV-DEPQILRAIEFLKDERAIIETTVERDFVRVL 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A +G ++ IV DG S + ++G + A+
Sbjct: 236 EGGCQVPIGINARLEGENIHISAIVGLPDGSESIRQSIVAQKSQYQSVGAELARVFIEKG 295
Query: 301 NKNVF 305
K +
Sbjct: 296 AKQLL 300
>gi|307332259|ref|ZP_07611338.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
gi|306882087|gb|EFN13194.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
Length = 319
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT
Sbjct: 15 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMG-DLSKLGGKGAFT 71
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L ++
Sbjct: 72 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDEMPA 131
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L ++ + RG RL KL + A++LA +G++R+ +
Sbjct: 132 GTRIGTSSVRRVAQLAITHPELECVPMRGNANRRLEKLEAGECDALMLAVSGLERIGRTD 191
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EIL ++ P G G + ++ ++ + E V + D W + ER L L G
Sbjct: 192 RISEILPVDTMCPPIGAGVLGLQCREDDTETIEAVAGLGDADVWKEITAERMLLHVLQGH 251
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 252 CNSPIAGYAKAERDGRLSLRARVFSPDGKRVLDAHEWAGPLDPATLGTSVAVALLRQGAR 311
Query: 303 NVFN 306
V +
Sbjct: 312 EVID 315
>gi|210134437|ref|YP_002300876.1| porphobilinogen deaminase [Helicobacter pylori P12]
gi|226706287|sp|B6JKG8|HEM3_HELP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|210132405|gb|ACJ07396.1| porphobilinogen deaminase [Helicobacter pylori P12]
Length = 306
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 151/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++++ PS GQGA+ +E N K ++ +N E + ER F+ L+G C
Sbjct: 181 YRKAFSVKEMIPSMGQGALGVEML-KNHKHFATLQKLNDEKSAFCCRLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|257791816|ref|YP_003182422.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243]
gi|257475713|gb|ACV56033.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243]
Length = 327
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 15/314 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A L P ++ + + TKGDRI L++IG KGLFT
Sbjct: 4 MRIGTRGSKLALWQAHHVADLLRAAS--PGMDVSVEVVKTKGDRILGVALSKIGDKGLFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L G +D VHS KD+PT L +GL ++ L R D RDV ++ + + L S
Sbjct: 62 KELEQALFDGRVDVCVHSMKDVPTALPEGLALAGCLIRADARDVLVAASGTTFAGLPAGS 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT +LRR + L R D+ ++ RG ++TR+ K+ + A++LA AGI+R+ +
Sbjct: 122 RVGTGALRRLSQLRAVRDDLDYVEVRGNLDTRIAKVRDGALDAVVLAAAGIERMGWSAEV 181
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E +++ P+ GQGAI +E ++ + + T V ER + LDG C+
Sbjct: 182 AEAFSVDTVVPAVGQGAIGLEVRADDERTARACAQVRCAATDACVAAERHVMRALDGGCQ 241
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-------------RNGNRCDAINIGRDA 292
I +A + L V + DG +A + + A
Sbjct: 242 VPIGAYARYEEGLLVLDAFVGSLDGSHVLRSRLSAASQPPNDTDAVEAAVREARALAQRA 301
Query: 293 AQYIRFISNKNVFN 306
+ + V +
Sbjct: 302 VEEFEAQGARAVLD 315
>gi|15644865|ref|NP_207035.1| porphobilinogen deaminase [Helicobacter pylori 26695]
gi|2495174|sp|P56140|HEM3_HELPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|2313328|gb|AAD07304.1| porphobilinogen deaminase (hemC) [Helicobacter pylori 26695]
Length = 306
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 151/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N K ++ +N E + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEKSAFCCRLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|295687518|ref|YP_003591211.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756]
gi|295429421|gb|ADG08593.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756]
Length = 333
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 117/315 (37%), Positives = 168/315 (53%), Gaps = 15/315 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKI----PPHNIV----IIPLSTKGDRITNRTLT 56
P RIG R S L+LA + ++ + I +IP+ T GDRI +R L
Sbjct: 17 PIRIGARGSKLSLAQSGLMQARIAAALGAPAGASKEEIEAFAPLIPIVTSGDRIQDRRLM 76
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FISH +
Sbjct: 77 EIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFISHVCE 136
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +G+
Sbjct: 137 RLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQSGL 196
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + K ++ + PP+PGQGA+ IET + + T +V ER
Sbjct: 197 NRLGLGHLTKSWIDPDACPPAPGQGALVIETR-AEDIGAAWLDAVRCRPTTIAVAAERGA 255
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE----VSRNG--NRCDAINIGR 290
L L+GSC++AI A G+ L L +G ++ +G + +A+ +G
Sbjct: 256 LLALEGSCRTAIGARATLDGARLSMIVEALTPNGAQRFRRHGEITLSGGDDAGEALALGL 315
Query: 291 DAAQYIRFISNKNVF 305
+R +
Sbjct: 316 KLGAEVRAEGGDAIL 330
>gi|332208884|ref|XP_003253541.1| PREDICTED: porphobilinogen deaminase, partial [Nomascus leucogenys]
Length = 332
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 103/306 (33%), Positives = 152/306 (49%), Gaps = 17/306 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFRHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCDAI 286
L+G C +A K LY G V + DG + + +G D
Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314
Query: 287 NIGRDA 292
+G A
Sbjct: 315 LVGITA 320
>gi|86131003|ref|ZP_01049602.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134]
gi|85818414|gb|EAQ39574.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134]
Length = 304
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 91/304 (29%), Positives = 145/304 (47%), Gaps = 10/304 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L D + ++P+ + GD I ++ L E+G
Sbjct: 1 MS-KTIRIGTRDSELALWQAKTVQKQLEDH----GYTTELVPVKSTGDLILDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + D
Sbjct: 56 TGIFTKTLDVAMLNGTVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKG---APD 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRR+A L + D RG + TRL KL + + A AG+KR+
Sbjct: 113 YKQACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRIN 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+ ++ P+P QGA+ + + ++E +N T + ER FL L
Sbjct: 173 VLPENYEV--LDWMIPAPAQGAMLVVAMEEDAFSKEACAKLNDRTTALCTHIEREFLRTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A + F G++ + DG EV + + +A+ G D A +
Sbjct: 231 EGGCTAPIGALAQEIDGAIRFKGVLFSLDGATKIEVEQVVSTENALGFGTDCALEVLDNG 290
Query: 301 NKNV 304
+ +
Sbjct: 291 GRAL 294
>gi|319956650|ref|YP_004167913.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511]
gi|319419054|gb|ADV46164.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511]
Length = 317
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 95/301 (31%), Positives = 153/301 (50%), Gaps = 2/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL A+ + + P + ++ ++++GD+I +R L +GGKG F
Sbjct: 3 KLTIVTRASQLALWQAYHIKDRIEKAR--PELEVELMEITSRGDKILDRPLALVGGKGHF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E ++++G AVHS KD+PT + +GL+++A R+D DVF+SH SL+ L
Sbjct: 61 TKELEDEMLAGRAQMAVHSLKDVPTFIPEGLELAAITERQDQSDVFLSHRFSSLEALPEG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LAY G+ RL K
Sbjct: 121 AVVGTTSLRRRMQLLQRRPDLIVKDLRGNVNTRLRKLAEGQYDAIILAYIGLARLDLLKE 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + +E P GQ A+ IE + + + L ++ +T ER F+A + C
Sbjct: 181 IPHVQKLEWMIPPMGQAALGIEILSGDEELRHLAMELDDPETHLCTEIEREFVAAVGAGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A A L ++ D +A G+ A+ + +
Sbjct: 241 SAPVAVNARIIDGELDLRAMLGYPDASEVLYEELVLPMEEATGAGKRLAEKMIADGALEL 300
Query: 305 F 305
Sbjct: 301 L 301
>gi|296423212|ref|XP_002841149.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637383|emb|CAZ85340.1| unnamed protein product [Tuber melanosporum]
Length = 349
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 11/312 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K RIG+R S LAL R SL ++ P N II ++T GD + L G K
Sbjct: 28 RKNIRIGSRKSKLALVQTHLVRDSLQAIY--PDTNFEIIAMTTTGDNNQTKPLHNFGAKA 85
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
L+T+E+E L+ +++ VHS KDMPT+L G +I A L RED RD + T +SL+
Sbjct: 86 LWTQELEVLLLEDKLEMIVHSLKDMPTQLPHGCKIGAILEREDPRDALVMKTGSSYKSLE 145
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIK 177
DL SV+GTSS+RR A + + ++ D RG + TRL KL++ + ++LA AG+
Sbjct: 146 DLPEGSVVGTSSVRRSAQIKKRYPHLNFEDVRGNVGTRLAKLDDPASSYTCLILAAAGLI 205
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + I L+ + GQGA+ +E + ++++V+ H++T ER+ +
Sbjct: 206 RLDLGERITGYLSSPCLLHAVGQGALGVEIRDGDEDTAKMLRVLGHKETTLHCLAERSLM 265
Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAA 293
L+G C I + +V++ DG+ F V A N GR A
Sbjct: 266 RTLEGGCSVPIGVETETATNGQMLMRAVVVSLDGQNFVNVEERMEVAGEEAADNFGRVVA 325
Query: 294 QYIRFISNKNVF 305
+ ++
Sbjct: 326 GKLVAAGAGDIL 337
>gi|154496817|ref|ZP_02035513.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC
29799]
gi|150274069|gb|EDN01169.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC
29799]
Length = 287
Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 11/296 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIG+R S LA+ + ++ P + ++ + T GD+I +RTL ++GGKGLF
Sbjct: 2 KLRIGSRESVLAVTQSELVMEAIRAF--DPSIELELVTMKTTGDKILDRTLDKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E++ L+ G +D VHS KD+P + L ++ + RED RD + ++ D
Sbjct: 60 VRELDAALLEGRVDITVHSCKDLPMETDPRLPLAGFSKREDPRDALVLPAGKTELD--PS 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG +S RR L D+ V RG ++TRL KL+ + A++LA AG+KRL E
Sbjct: 118 LPIGCASRRRAIQLAALYPDMEVAPVRGNVQTRLRKLDEGQYSALVLASAGLKRLGLEGR 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E+ P+ GQG + ++T + + + + ERAF+ LDG C
Sbjct: 178 IARYFTAEEMIPAAGQGILAVQTRAG--ENYPCLAAVTDREGTICALAERAFVRMLDGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
S +A G TL G+ +G+ +G +A +G A+ ++ +
Sbjct: 236 SSPVAAHGVVDGDTLILTGM--DENGR---RDRISGPVTEAEQLGETLARRMKEAA 286
>gi|295131995|ref|YP_003582671.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87]
gi|294980010|gb|ADF50475.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87]
Length = 304
Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 91/304 (29%), Positives = 149/304 (49%), Gaps = 10/304 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S LAL A +S+L + H ++P+ + GD + L E+G
Sbjct: 1 MNKVIRIGTRDSELALWQAKTVQSALEKL----GHQTELVPVKSTGDLNLDVPLYEMGIT 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+ ++ +++G++D AVHS KD+PT L KG+ +A L R + +D+ I L
Sbjct: 57 GIFTKTLDIAMLTGKVDIAVHSMKDVPTALPKGIVEAAVLKRANTKDILIHKGTDFLDAQ 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
I T SLRRK+ L V+D RG + TR+ KL ++ + + A AG++R+
Sbjct: 117 G---TIATGSLRRKSQWLHRYPTHEVVDLRGNVNTRMQKLEDSNWNGAIFAAAGLERI-- 171
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + ++++ P+P QGA+ + + + + +NH T V+ ER FL L+
Sbjct: 172 EIKPENFIDLDWMIPAPAQGAMLVVALEKDEFTRTAIGALNHYQTDLEVHVEREFLRTLE 231
Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C + I A L+F G + + DG EV + + G+ A+ I
Sbjct: 232 GGCTAPIGALAKIDNDNILHFKGALFSLDGSQKIEVEKRIAADNVAEFGKFCAKEILAKG 291
Query: 301 NKNV 304
+
Sbjct: 292 GAKL 295
>gi|39940760|ref|XP_359917.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15]
gi|145010915|gb|EDJ95571.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15]
Length = 340
Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 21/324 (6%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + +IGTR SPLA+ T + L H P + ++T+GD+ L +G
Sbjct: 1 MSNSRVIKIGTRRSPLAIRQVEHTVALLQKAH--PDITFEVNAIATQGDKDKVSPLPSMG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114
KG++T E+E L +GE+D VH KDMPT L ++ A + RED RDV +
Sbjct: 59 -KGMWTNELEAMLTTGEVDFIVHCLKDMPTTLPDNCELGAVMEREDPRDVVVIKPKHVQA 117
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILL 171
+++ DL S++GTSS RR + L RW ++ D+RG I+TRL KL+ + + I+L
Sbjct: 118 GCKTIADLPKGSLVGTSSPRRSSQLKRWYPELRFRDYRGNIDTRLRKLDAEDGEFDCIIL 177
Query: 172 AYAGIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
A AG+ R+ + I + L+ + GQGA+ +E + + ++++ + T
Sbjct: 178 AAAGLHRMDQHSRIAQYLDSTTEGGGVLHAVGQGALGLEVRKGDIETLKVIECLVDMPTM 237
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNR--- 282
+ ER + L+G C I +G TL V+A DG + + +
Sbjct: 238 KAGWAERTVMRTLEGGCSVPIGVETSWSDEGKTLRLRATVVALDGSEAVDADASASVSNQ 297
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+A +G+ +Q + K + +
Sbjct: 298 EEAEALGKQVSQVLVERGAKKILD 321
>gi|33520023|ref|NP_878855.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus]
gi|39931423|sp|Q7VRM4|HEM3_BLOFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33504369|emb|CAD83262.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus]
Length = 311
Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 3/304 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIG 59
M+ K RI TR SPLA+ A + L H P +IP+ T GD + + T
Sbjct: 1 MQAKILRIATRKSPLAICQACYVCNKLK--HYHPHIQTELIPIITTGDTSLHTVSKTNKI 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KG F +E+E LI D AVHS KD+ L K L I R D RD F+S ++
Sbjct: 59 KKGAFIKELEYALIEHRADIAVHSMKDVTVLLPKELIIPVLCKRHDPRDAFVSIQYPNIH 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L S+IGTSSLRR+ + RSD+ + D RG I TR+ KL+ + +AI+LA AG+ RL
Sbjct: 119 SLPTGSIIGTSSLRRQCQIRAQRSDLILHDLRGNINTRIKKLHQGQYNAIILAVAGLTRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K K I+ ++ + P+ GQG I IE +N+ L+ + H++T + ERA
Sbjct: 179 KLTKYIQTYIDPSELLPAMGQGVIAIECRINDINTISLLSPLYHKETSLCIKSERAVTTY 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+ C+ IA +A + + ++ ++ DG I + A +G + A+ +
Sbjct: 239 LESYCRLPIASYAEIQNNQIWLRALIGLPDGSIIIRTEGIASLDKAEELGLNLAKDLLIQ 298
Query: 300 SNKN 303
KN
Sbjct: 299 FKKN 302
>gi|239814381|ref|YP_002943291.1| porphobilinogen deaminase [Variovorax paradoxus S110]
gi|239800958|gb|ACS18025.1| porphobilinogen deaminase [Variovorax paradoxus S110]
Length = 308
Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 151/301 (50%), Gaps = 9/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF
Sbjct: 11 IVIATRESRLALWQAEHVQALLQER----GHAVSLLGMTTRGDQILDKSLSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P L +G ++ L RED RD +S SL +L +
Sbjct: 67 KELELALEEGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDALVSPRHASLDELPQGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL E I
Sbjct: 127 VVGTSSLRRVVLLRALRPDLRIEPLRGNLDTRLRKLDQGHYDAIVLAAAGLKRLGLEHRI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + P+ GQGA+ IE + L+ ++H W + ERA + GSC
Sbjct: 187 RVAFDPDTMLPAAGQGALGIEVRADRTDLIALLAALSHSRDWLATAAERAVSRSMGGSCS 246
Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRDAAQYIRFIS 300
+A A + L +G V D A +G AA +R
Sbjct: 247 MPLAAHARWQADGALRVDAAWGDPEGNAALVRVHAQAPAADFAQAGALGERAAALLRDAG 306
Query: 301 N 301
Sbjct: 307 A 307
>gi|154298906|ref|XP_001549874.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10]
gi|150857605|gb|EDN32797.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10]
Length = 379
Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 147/315 (46%), Gaps = 15/315 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LA+ + +++L H P N I L T GD+ L + G K L+
Sbjct: 52 TIHIGTRKSALAMVQTEQVKAALEKAH--PHLNFEITKLETMGDKNQVTALHDFGAKSLW 109
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L+ ++D VH KDMPT+L I A L RED RD I +SL +L
Sbjct: 110 THELEALLLDRKLDIVVHCLKDMPTQLPSKCIIGAILEREDPRDALIMKAGSNYKSLSEL 169
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
SV+GTSS+RR A + R ++ + RG I TRLNKL ++ K ++LA AG+ R+
Sbjct: 170 PAGSVVGTSSVRRSAQIARKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAGLLRM 229
Query: 180 KKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ I + L+ + + GQGA+ +E + + ++ + HE T + ER+
Sbjct: 230 GWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEIGTMISALQHEPTQLAGLAERS 289
Query: 236 FLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRD 291
+ L+G C I + + L IV++ DG E R DA G
Sbjct: 290 LMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGTESVESERLEEILTPKDADEFGWS 349
Query: 292 AAQYIRFISNKNVFN 306
AQ + +
Sbjct: 350 LAQDLVSKGAAKILE 364
>gi|67459209|ref|YP_246833.1| porphobilinogen deaminase [Rickettsia felis URRWXCal2]
gi|75536359|sp|Q4ULA5|HEM3_RICFE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|67004742|gb|AAY61668.1| Porphobilinogen deaminase [Rickettsia felis URRWXCal2]
Length = 301
Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 5/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL + P N I+P+ T GD I N+ L +IGG
Sbjct: 1 MTN-SIRIGTRKSPLALIQTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAILEREDPRDVFVCLNYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIG+S++RRKA + + RSD+ V FRG I++R+ KL + A +LAYAG+KRL+
Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRSDLKVTVFRGNIDSRIKKLMTAEVDATILAYAGLKRLR 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 178 AFNPEYCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHLPTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LD +C++ IA ++ Y + ++ D + + + G AA+ +
Sbjct: 238 LDANCRTPIAAYSKYLDADNIQTDFMLGNLDCSKIIFHTEVTDINTSKEAGIKAAKMMLN 297
Query: 299 I 299
Sbjct: 298 Q 298
>gi|317010518|gb|ADU84265.1| porphobilinogen deaminase [Helicobacter pylori SouthAfrica7]
Length = 306
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 94/303 (31%), Positives = 151/303 (49%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + T GD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANYIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITQRADVRDTFLSAQFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL +
Sbjct: 120 AKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLECGEFDAIVLAEAGLRRLNIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E + K ++ +N E + + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEML-KSHKHFSTLQKLNDEKSAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + A G + I+ +G+ + G++ A ++ ++ + +
Sbjct: 239 CQIPVGVHASLMGEKVKIQAILGLPNGEEVITKEKQGDKNKAFDLVQELLEAFLQNGARE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|325661929|ref|ZP_08150549.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471781|gb|EGC74999.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 292
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 7/298 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGK
Sbjct: 1 MKRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + A+ ++
Sbjct: 59 GLFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLV--PAKGKENW 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL
Sbjct: 117 NGQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGL 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+ I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LD
Sbjct: 177 EERIERYFSPEEILPAAGQGILVVQ---GREEMRELVKELQPEEMEVIAENERAFVRRLD 233
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C S +A + + L G+ D + ++ + ++G + A +R
Sbjct: 234 GGCSSPVAAYGRIQQDELVLTGLYYEEDTGNYVIATKRAEVRASAHLGWELADELRTK 291
>gi|312129517|ref|YP_003996857.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132]
gi|311906063|gb|ADQ16504.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132]
Length = 300
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 160/303 (52%), Gaps = 11/303 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ A +S L I+ + TKGD++ + L++IG KG+F
Sbjct: 2 KIRIGTRVSLLAMWQANYIKSRLEAA----GAETEIVGMETKGDKVLDVALSKIGSKGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
TEE+E+KL++GEI AVHSAKDM + L + ++ A+ RE DV + A DL+
Sbjct: 58 TEELEEKLLNGEIHIAVHSAKDMQSSLAEDFELIAFTEREYPGDVLV---ADRALDLSAP 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RR A + I +++ RG ++TR+ K+ + + + LAYAG+ R++ +++
Sbjct: 115 ITIGTSSVRRIAFFKKHYPHIKLVNMRGNLQTRIQKMRSGQCDGLALAYAGVHRMEYDEL 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV--INHEDTWDSVNCERAFLAELDG 242
I ++ F P GQG + +E N + + N E+T+ + ERAFL E++G
Sbjct: 175 IVHRFPLDQFIPPVGQGTVTVEIAKNLDENIKTFVKNTCNDENTYKCLQAERAFLKEMNG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + G A +G + F G + +G + G D I +G+ AA+ +
Sbjct: 235 GCSIPVFGHATLEGEEILFKGGITNLEGTEEVSMEFRGT--DPILLGQHAAEQVLQNGGA 292
Query: 303 NVF 305
+
Sbjct: 293 EIL 295
>gi|315023924|gb|EFT36926.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-YM]
gi|325335710|gb|ADZ11984.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-GD]
Length = 306
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 10/308 (3%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M K +IGTR SPLAL A E ++L + + I+P+ + GD+ + L +
Sbjct: 1 MSLMKNTIKIGTRNSPLALWQAKEVAAALEQKN----YATEIVPIVSSGDKNLTQPLYSL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + ++ +
Sbjct: 57 GITGVFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLV-RSSNAK 115
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR
Sbjct: 116 DKSLEELTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKR 175
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + ++ +P QG + + H +N + E+VK INH T V ER FL
Sbjct: 176 MALDIP---YEHLPFMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLN 232
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C + I FA + F G + + +GK E++ N G + A +
Sbjct: 233 RLEGGCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELADKLLA 292
Query: 299 ISNKNVFN 306
K + +
Sbjct: 293 NGGKAIMD 300
>gi|298674197|ref|YP_003725947.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303]
gi|298287185|gb|ADI73151.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303]
Length = 308
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 150/300 (50%), Gaps = 7/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LAL L + N + + T GD T+R L E+GG G F
Sbjct: 3 LIIGTRGSSLALTQTRRVSQMLKE----EGVNTFLKIIKTSGDSFTDRPLHELGGVGAFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+++++SGE+D AVHS KD+PT+ + L SA L R+ D ++ +L +L +
Sbjct: 59 REIDERMLSGELDIAVHSMKDLPTERPEELPTSAVLKRDSPFDALLTRDGSTLDELPEGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT+SLRRK+ +LR+R D V RG I+TRL KL + I+LA AG++R+ + +
Sbjct: 119 VIGTTSLRRKSQVLRYRPDFDVQSLRGNIDTRLKKLESGIYDGIILAEAGLRRMGWDIPV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L+ + F PS QGAI + + +++ +V INH T ER + + G C
Sbjct: 179 HQ-LDTDHFCPSANQGAIAV-VAKSGDESENVVSRINHPQTKIETEIERILIGNVGGGCI 236
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
I +A ++ VLA DG + V + + + + + K +
Sbjct: 237 VPIGAYAEFVNDEKIHIRSEVLALDGSHYVAVDDVISADNYKEEANELGEELVRKGGKKL 296
>gi|326804046|ref|YP_004321864.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650262|gb|AEA00445.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a]
Length = 332
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 28/329 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +RIGTR S LA+ + E +L V+ P ++ LSTKGD+ + L++IGG
Sbjct: 1 MT--TYRIGTRSSRLAMQQSLEVVRALEAVY--PQDEFQLVKLSTKGDKDKSSPLSKIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F IE+ L G++D VHS KD+P++L +G ++A R+D DV ++ D
Sbjct: 57 KGVFVRWIEQALAQGKVDFIVHSLKDVPSELAQGTVLAAIPKRQDPGDVILTAKGMDWHD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR-- 178
L + +GT SLRR A L R D+ ++ RG I++RL+KL A++LA AG+KR
Sbjct: 117 LPNGARVGTGSLRRLAQLHALRPDLEIVHVRGNIDSRLDKLARGDFQALVLATAGLKRLQ 176
Query: 179 ----------------------LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216
L ++ ++++ P+ GQGA+ ++ ++ + +E
Sbjct: 177 LLDYPFDSQRFNQKEVNSEAHILNNYELQAHAFSLDEMIPAVGQGALAVQCLNDDQQTRE 236
Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276
+++ ++ +T +V CER L L C + + KG + ++ DG
Sbjct: 237 VLQAVDDPETHQAVACERVVLKALGADCNYPVGAYGQIKGQEINLTAMIGRQDGFALVRS 296
Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVF 305
A+ +G+ Q +
Sbjct: 297 QLEAPLDQALALGQAVYQDLLDQGAGKWL 325
>gi|319792195|ref|YP_004153835.1| porphobilinogen deaminase [Variovorax paradoxus EPS]
gi|315594658|gb|ADU35724.1| porphobilinogen deaminase [Variovorax paradoxus EPS]
Length = 308
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 104/301 (34%), Positives = 153/301 (50%), Gaps = 9/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF
Sbjct: 11 IVIATRESRLALWQAEHVQALLQER----GHTVSLLGMTTRGDQILDKSLSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E + G D AVHS KD+P L +G ++ L RED RD +S SL +L +
Sbjct: 67 KELETAIEDGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDAMVSPRYASLDELPHGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E I
Sbjct: 127 VVGTSSLRRVVLLKARRPDVRIEPLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLEDRI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +D P+ GQGA+ IE + EL+ + H W S ERA + GSC
Sbjct: 187 RVAFEPDDMLPAAGQGALGIEVRADREDLIELLAPLAHRGDWLSTAAERAVSRAMGGSCS 246
Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFIS 300
+A A + L +G V + D A +G AA +R
Sbjct: 247 MPLAAHARWQADGVLRIDAAWGDPEGNAPLVRVHAQADVGDFGRADALGEHAAALLRDAG 306
Query: 301 N 301
Sbjct: 307 A 307
>gi|313206850|ref|YP_004046027.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868]
gi|312446166|gb|ADQ82521.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868]
Length = 303
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 8/305 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +IGTR SPLAL A E ++L + + I+P+ + GD+ + L +G
Sbjct: 1 MKNTIKIGTRNSPLALWQAKEVAAALEQKN----YATEIVPIVSSGDKNLTQPLYSLGIT 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + ++ +
Sbjct: 57 GVFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLV-RSSNAKDKS 115
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+
Sbjct: 116 LEELTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMAL 175
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ ++ +P QG + + H +N + E+VK INH T V ER FL L+
Sbjct: 176 DIP---YEHLPFMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLE 232
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + I FA + F G + + +GK E++ N G + A +
Sbjct: 233 GGCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELADKLLANGG 292
Query: 302 KNVFN 306
K + +
Sbjct: 293 KAIMD 297
>gi|313676857|ref|YP_004054853.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126]
gi|312943555|gb|ADR22745.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126]
Length = 311
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 103/303 (33%), Positives = 157/303 (51%), Gaps = 7/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A ++ + H I + TKGD+I + +++IG KG+FT
Sbjct: 3 IRIGTRGSKLALWQAEYVKTRIEKA----GHTAEIKIIQTKGDKILDVAISKIGSKGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124
EEIE +L G ID AVHSAKDM ++L +G + A+ RE + DV + + + D
Sbjct: 59 EEIEAQLEDGNIDIAVHSAKDMQSELPQGFDLIAFTEREKVNDVLVSHKDSIDINDKDNP 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
VIGTSS RR A L + I +D RG ++TR+ K+ AILLAYAG+ R++ +
Sbjct: 119 IVIGTSSTRRIATLKHFYPHIKTVDIRGNLQTRIRKMEEGLCDAILLAYAGVHRMEYDDK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI--NHEDTWDSVNCERAFLAELDG 242
IK L+ ++F P+ GQG++ IE H + ++ + NH +T + ERA+L L G
Sbjct: 179 IKLELSTQEFIPAVGQGSVAIEVHESIEDDKKQMLRFALNHRNTEYCLRAERAYLRHLQG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + G A +++ +++ DG+ + A +G A+ I
Sbjct: 239 GCSIPVFGLATLNSNSIEMEAGIISLDGQERISMKLTDETSRAEELGTLIARQILKKGGD 298
Query: 303 NVF 305
V
Sbjct: 299 KVL 301
>gi|89900504|ref|YP_522975.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118]
gi|122996949|sp|Q21XQ9|HEM3_RHOFD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89345241|gb|ABD69444.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118]
Length = 315
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 106/302 (35%), Positives = 152/302 (50%), Gaps = 10/302 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M I TR S LAL A + L H + ++ ++T GD+I +R L+++GG
Sbjct: 1 MS--TLTIATRESRLALWQAEYVQDLLTRR----GHQVGLLGMTTLGDQILDRALSKVGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L G D AVHS KD+P +L G ++ + RED RD F+S+ +L
Sbjct: 55 KGLFVKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLAS 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR ALL R D+ + RG ++TRL KL++ AI+LA AG+KRL
Sbjct: 115 LPQGAVVGTSSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ D P+ GQGA+ IE + + + H TW +V+ ERA +
Sbjct: 175 LSQRIRATFEPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAM 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRDAAQYI 296
GSC +A +A L DGK V + D A +G A +
Sbjct: 235 GGSCSMPLAAYATLAADILTIDAAWGDPDGKLALVHVRASAAVSDLASATALGARVAADL 294
Query: 297 RF 298
R
Sbjct: 295 RA 296
>gi|156064079|ref|XP_001597961.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980]
gi|154690909|gb|EDN90647.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 379
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 146/315 (46%), Gaps = 15/315 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LA+ + +++L H P N I L T GD+ L + G K L+
Sbjct: 52 TIHIGTRKSALAMVQTEQVKAALEKAH--PNLNFEITKLETMGDKNQVTALHDFGAKSLW 109
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L+ +D VH KDMPT+L + I A L RED RD I ++L +L
Sbjct: 110 THELEALLLERNLDIVVHCLKDMPTQLPQKCTIGAILEREDPRDALIMKAGSNYKTLSEL 169
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
SV+GTSS+RR A + ++ + RG I TRLNKL ++ K ++LA AG+ R+
Sbjct: 170 PAGSVVGTSSVRRSAQIAMKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAGLLRM 229
Query: 180 KKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ I + L+ + + GQGA+ +E + + +V + HE T + ER+
Sbjct: 230 GWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEINTMVSALQHEPTQLAGLAERS 289
Query: 236 FLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRD 291
+ L+G C I + + L IV++ DG E R DA G
Sbjct: 290 LMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGTESVESERLEEILTPKDADEFGWT 349
Query: 292 AAQYIRFISNKNVFN 306
AQ + +
Sbjct: 350 IAQDLVSKGAAKILE 364
>gi|111019045|ref|YP_702017.1| porphobilinogen deaminase [Rhodococcus jostii RHA1]
gi|110818575|gb|ABG93859.1| hydroxymethylbilane synthase [Rhodococcus jostii RHA1]
Length = 321
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 18/318 (5%)
Query: 1 ME---KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M + RIGTR S LA A R +L+ H+ ++ + TKGD+ E
Sbjct: 1 MSAVGTRTLRIGTRGSELATTQAGTVRDALISA----GHDAELVIIKTKGDQSMES--VE 54
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
G G+FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++
Sbjct: 55 KIGVGVFTAELREALADGRVDVAVHSYKDLPTAPDERFTIAAIPPREDPRDALVARDGLV 114
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L S +GTS+ RR + L + + RG ++ RL K+ + + A++LA AG+
Sbjct: 115 LGELPAGSKVGTSAPRRTSQLRALGLGLDIRPLRGNLQRRLGKVESGELDAVVLARAGLA 174
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +I E + P+P QGA+ +E N ++ ++ ++ +V ERA L
Sbjct: 175 RIGRLDLITESIEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALL 234
Query: 238 AELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
AEL+ C + + A L G A DG G+ +A +
Sbjct: 235 AELEAGCTAPVGAIAEVVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGSPENAEEL 294
Query: 289 GRDAAQYIRFISNKNVFN 306
GR A+ + + + + N
Sbjct: 295 GRSVARELLELGARELMN 312
>gi|284992946|ref|YP_003411500.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160]
gi|284066191|gb|ADB77129.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160]
Length = 312
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 91/304 (29%), Positives = 152/304 (50%), Gaps = 8/304 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LA + ++ +P + ++ +ST+GDR ++ + ++GG G+F
Sbjct: 8 TLRLGTRASQLATTQSQAVADAITAASGVP---VELVHISTEGDR-SSVAIAQLGGTGVF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
I + L+ G +D AVHS KD+PT GL I+A PRED RD ++ +L +L
Sbjct: 64 VTAIRQALLEGTVDVAVHSYKDLPTLPEPGLTIAAVPPREDPRDALVARDGLTLGELPAG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT + RR A L + V+ RG ++TR+ ++ A++LA AG+ RL +
Sbjct: 124 ARVGTGAPRRVAQLRALGLGLEVVPIRGNVDTRMARVVPGDLDAVVLARAGLSRLGRLSA 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L+ P+P QGA+ +E N+ + ++L+ ++ T V ER LA L+ C
Sbjct: 184 VTETLDPLQVLPAPAQGALAVECRGNDERTRQLLAALDDAATRACVVAERTTLAALEAGC 243
Query: 245 KSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ +A +A G L+ V A DG S G +A +GR+ A +
Sbjct: 244 SAPVAAYAEVAEGEDGPELFLRASVTALDGSDGVRGSITGPPPEAERLGRELAAELLDRG 303
Query: 301 NKNV 304
+
Sbjct: 304 AAEL 307
>gi|255280051|ref|ZP_05344606.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469]
gi|255269142|gb|EET62347.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469]
Length = 309
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 6/295 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ IG+R S LA+ + + ++ + P + I+ + T GD+I +RTL ++GGK
Sbjct: 1 MKRTIIIGSRESRLAVIQSEIVKQAIEQEN--PQLAVSILTMKTTGDKILDRTLDKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+++ L+ D +VHS KD+P ++ K L + A+ RED+RDV + D
Sbjct: 59 GLFVKELDRALLEKRSDLSVHSLKDVPMEVPKELPLLAFSAREDVRDVLVLPEGAVEPD- 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
G S RR + ++ RG + TRL KL+ + A++LA AG+KRL
Sbjct: 118 -FSKPFGCSGRRRALQIKELYPHVTCHPVRGNVLTRLRKLDEGEYGALILAAAGLKRLGL 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I + E+ P+ GQG + ++ +K + ++ D+ CERAF+ LD
Sbjct: 177 EGRISRYFSTEEMVPAAGQGILAVQGRCGED--HSYLKAFSDDEARDAALCERAFVRALD 234
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C S +A +A +GS + G+ D + G R DA IG + A+Y+
Sbjct: 235 GGCSSPVAAYARTEGSRILLTGLYYEEDTGRWCRGCLGGARTDAERIGAELAEYL 289
>gi|146298706|ref|YP_001193297.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101]
gi|146153124|gb|ABQ03978.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101]
Length = 307
Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 11/306 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K RIGTR S LAL A L D+ + I+ + ++GD I ++ L E+G
Sbjct: 1 MAEKTIRIGTRDSELALWQAHNVEKKLNDL----GYKTSIVAVKSQGDIILDKPLYELGI 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +I+G+ID AVHS KD+PT L KG+ A LPR ++ D+ + D
Sbjct: 57 TGIFTKTLDIAMINGDIDIAVHSMKDVPTALPKGIVQGAVLPRANVLDILVHKG---NPD 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
S I T SLRR+A + +V+D RG + TR+ KL +N + A AG++R+
Sbjct: 114 FTNPSTIATGSLRRQAQWFNKYPNHTVVDLRGNVNTRMQKLQDNNWDGAVFAAAGLERIN 173
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +N++ P+P QGA+ + N+ + + +N +T + ER FL L
Sbjct: 174 LKPEN--YINLDWMIPAPAQGAMLVVGMENDNYTLDALSQLNDIETEICTHIERQFLRTL 231
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C + I TL+F G++L+ DGK E+++ + + +G ++AQ I
Sbjct: 232 EGGCTAPIGALVTYNEDEDTLHFQGVLLSIDGKQKLEINKTVDISEWKKLGFNSAQEILN 291
Query: 299 ISNKNV 304
+
Sbjct: 292 NGGTEL 297
>gi|301630638|ref|XP_002944423.1| PREDICTED: porphobilinogen deaminase-like [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 8/302 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I TR S LAL A ++ L H + ++ L+T+GD+I +R+L++IGGKGLF +
Sbjct: 46 VIATRESRLALWQAAHVQALLAAR----GHAVTLLGLTTQGDQILDRSLSKIGGKGLFVK 101
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL L +V
Sbjct: 102 ELELALEQGRADIAVHSLKDVPMELPAGFALACVMEREDARDAFVSPRYASLDALPQGAV 161
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR+ LL R + + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 162 VGTSSLRRQVLLQALRPGLRIEPLRGNLDTRLRKLDAGQYDAIVLAAAGLKRLGLGERIR 221
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 222 SVFAPAEILPAAGQGALGIEVRSDRQDLIDALAPLAHRPTWLTVAAERAVSRAMGGSCSM 281
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSR---NGNRCDAINIGRDAAQYIRFISNK 302
+A +G+TL+ +G+ A +G A +R +
Sbjct: 282 PLAAHGQWQGNTLHLDAAWGDPEGRTALVRAQVQAAVATLAQAEALGDAVAARLRAGGAQ 341
Query: 303 NV 304
+
Sbjct: 342 GL 343
>gi|297190129|ref|ZP_06907527.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC
25486]
gi|197721156|gb|EDY65064.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC
25486]
Length = 311
Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+ + GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGIRTEVVPVKTTGDKWMG-DLSLVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+D+RD I +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPGGLTLDELPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL KL A A+LLA +G++R+ +
Sbjct: 124 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLAAGDADALLLAVSGLERIGRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI + L+ + P G G + ++ + + V + H T V ER FL L G
Sbjct: 184 VITQTLSTDVMCPPIGAGVLALQCREGDSALIDTVSDLGHPGTHREVTAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK+ R D +G A + +
Sbjct: 244 CNSPIAGYARSERNGELSLRAKVFSPDGKVILNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 ELID 307
>gi|213964875|ref|ZP_03393074.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46]
gi|213952411|gb|EEB63794.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46]
Length = 310
Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 90/301 (29%), Positives = 146/301 (48%), Gaps = 7/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R +L+++ ++ + T GD + + +IG G+F
Sbjct: 6 TIRIGTRGSELATTQAGHVRDALIEL----GQPAELVIVKTAGDHNRHDPVEKIGI-GVF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L G D VHS KD+PT + ++A R D R+ IS A L DL
Sbjct: 61 TQALRHALREGVCDIIVHSFKDLPTVPEDDMMVAAVPERVDPREALISRDATPLMDLPEG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L RSD+ ++ RG IETR+ ++ + A++LA AG++R +
Sbjct: 121 ARVGTSAPRRVSQLRALRSDLELVPLRGNIETRMGRV-SEDLDAVILARAGLERTGRLGE 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+++ P+P QGA+ +E + + ++++ I+H + ERA L +L+ C
Sbjct: 180 IAESLDVDVLMPAPAQGALALECRTADREIVDILRKIDHPVSHARAVAERAVLNKLEAGC 239
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ +A +A L V A DG + N A +GR A +
Sbjct: 240 TAPVAAYATVSDSGELTLQAGVFALDGSRQLLETATANVDKADELGRKVAAALLERGAHE 299
Query: 304 V 304
V
Sbjct: 300 V 300
>gi|320168193|gb|EFW45092.1| porphobilinogen deaminase [Capsaspora owczarzaki ATCC 30864]
Length = 333
Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 143/314 (45%), Gaps = 11/314 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+G+R S LAL + L ++ + +ST GD + +R L++IG
Sbjct: 1 MSGRVVRVGSRKSELALIQTNSVIARLKAIYS--DCTFELTTMSTTGDNVLDRALSKIGE 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117
K LFT+E+E L E+D VHS KD+PT L G+ I A R+ D I +
Sbjct: 59 KSLFTKELEVALAQNEVDLVVHSLKDLPTTLPPGMTIGAICKRDSPYDAVILRAKFAGLT 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGI 176
L L SVIGTSSLRR A L R + D RG + TRL KL++ ++LA AG+
Sbjct: 119 LATLPEGSVIGTSSLRRIAQLRRAFPHLVFRDVRGNLNTRLRKLDDAETYAGLILAEAGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + EIL E + GQGA+ IE N+ EL+K + DT ERAF
Sbjct: 179 DRMGWQGRVSEILKPEVTLYAVGQGALAIECRENDTATLELLKPLQDNDTTLRCTAERAF 238
Query: 237 LAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN---IGRD 291
+ L+G C + L G V + DG R DA +G+
Sbjct: 239 MRSLEGGCSVPLGVHTEFDASSGQLRLRGGVFSLDGTDSRFAERTITATDAATASGLGQA 298
Query: 292 AAQYIRFISNKNVF 305
A + +
Sbjct: 299 LATEMIAAGAAEIL 312
>gi|269215656|ref|ZP_06159510.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122]
gi|269131143|gb|EEZ62218.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122]
Length = 318
Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 142/311 (45%), Gaps = 7/311 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A + ++ P + I + T GDR L EIG
Sbjct: 1 MHNDTCVIGTRGSALALWQAHAVKRAIEA--SRPDVSCEIRVIKTTGDRNLATPLAEIGD 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117
KGLFT+++E L++GE+D VHS KD+PT+L G I+A L R D RDV + +
Sbjct: 59 KGLFTKDLEAALVAGEVDICVHSMKDVPTELANGCGITAMLERADARDVIVCGPRIQAEC 118
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L D+ S +GT SLRR A + S I RG ++TR+ K + +LA AG+
Sbjct: 119 LADVPAGSRLGTGSLRRVAQIRAGFSGIVPTPIRGNVDTRIAKACGEEYEGAVLAAAGVT 178
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ I + + + P+ GQGA+ IE + + + EL I+ T V ER L
Sbjct: 179 RMGLADRIAAYIPVSEIVPAVGQGAVGIEARLGDERVCELCARIDDAATRVCVEAERIVL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA--INIGRDAAQY 295
L+G C+ + + + +V + DG V+ DA ++ R
Sbjct: 239 CALEGGCQVPMGAYMRFDSGDIAADAVVASVDGSRVARVALRVPASDATPADVARRVLAE 298
Query: 296 IRFISNKNVFN 306
+ +
Sbjct: 299 LSAQGADVILE 309
>gi|223648136|gb|ACN10826.1| Porphobilinogen deaminase [Salmo salar]
Length = 359
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 103/284 (36%), Positives = 146/284 (51%), Gaps = 6/284 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LA L ++ P ++ I+ ++T GD+I + L++IG K L
Sbjct: 17 RVIRIGTRKSQLARIQTDSVAEKLKGLY--PDVHLEIVGMTTTGDKILDTALSKIGEKSL 74
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H K L
Sbjct: 75 FTKELETALEKNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPKNMGKSLDT 134
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++R+
Sbjct: 135 LPDKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKDDFSAIILAAAGLRRM 194
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + +IL ED + GQGA+ IE + E+V V++ +T ERAFL
Sbjct: 195 GWDSRVSQILGPEDCMYAVGQGALAIEVRARDEDILEMVSVLHDPNTVLRCIAERAFLRR 254
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
L+G C +A K S LY G V + DG + + +
Sbjct: 255 LEGGCSVPVAVHTEVKDSQLYLTGAVYSLDGSDSLKETMQTSIA 298
>gi|226361138|ref|YP_002778916.1| porphobilinogen deaminase [Rhodococcus opacus B4]
gi|226239623|dbj|BAH49971.1| porphobilinogen deaminase [Rhodococcus opacus B4]
Length = 321
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 93/318 (29%), Positives = 149/318 (46%), Gaps = 18/318 (5%)
Query: 1 ME---KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M + RIGTR S LA A R +L+ H+ ++ + TKGD+ E
Sbjct: 1 MSAVGTRTLRIGTRGSELATTQAGTVRDALISA----GHDAELVIIKTKGDQSMES--VE 54
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
G G+FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++
Sbjct: 55 KIGVGVFTAELREALADGRVDVAVHSYKDLPTARDERFTIAAIPPREDPRDALVARDGLV 114
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+
Sbjct: 115 LGELPPGSKVGTSAPRRTSQLRALGLGLDILPLRGNLQRRLGKVESGELDAVVLARAGLA 174
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +I E L P+P QGA+ +E N ++ ++ ++ +V ERA L
Sbjct: 175 RIGRLDLITESLEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALL 234
Query: 238 AELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
AEL+ C + + A L G A DG G+ +A +
Sbjct: 235 AELEAGCTAPVGAIAEVVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGSPENAEEL 294
Query: 289 GRDAAQYIRFISNKNVFN 306
GR A+ + + + + N
Sbjct: 295 GRSVARELLELGARELMN 312
>gi|162449896|ref|YP_001612263.1| hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56']
gi|189028159|sp|A9FDP9|HEM3_SORC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|161160478|emb|CAN91783.1| Hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56']
Length = 300
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 158/297 (53%), Gaps = 6/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ TR S LALA + SL +P ++ + + T GD+ +R+L +IGGKGLF
Sbjct: 5 LTLATRRSALALAQSRAFARSLEAA--VPDLSLRELEVVTSGDKTQDRSLQDIGGKGLFI 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ D AVHS KD+P ++ L ++ RED RD ++ + L +L +
Sbjct: 63 KELEEALLDRRADFAVHSIKDVPAEIAPALCLACIPAREDPRDALVTRSGALLAELPAGA 122
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR L R D+ + RG ++TRL K+ + A++LA AG+KRL E
Sbjct: 123 RVGTSSLRRAVALREARPDLVIEPVRGNVDTRLRKVFDGVFDAVVLALAGLKRLGLEARA 182
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ E P+ GQGA+ IE + ++++ + +T V+ ERA +A ++GSC+
Sbjct: 183 TEVLSPEVSLPAIGQGALGIECRTADDSVRDVLGTLADAETTICVSAERAVMAAVEGSCR 242
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDAAQYIRF 298
+ +A +A G L+ ++ DG R GN +A +G D ++
Sbjct: 243 TPVAAYAVRDGGALWLRALLAEPDGSRLRRAERRLSWPGNTREAERLGADLGAELKK 299
>gi|256783360|ref|ZP_05521791.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 311
Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLG-DLSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L
Sbjct: 64 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +
Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + T ER FL L G
Sbjct: 184 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG A L V DGK+ R D +G A + +
Sbjct: 244 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 EIID 307
>gi|313682001|ref|YP_004059739.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994]
gi|313154861|gb|ADR33539.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994]
Length = 313
Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 6/306 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL + +S + + + + + T GD+I + L +IGGKG
Sbjct: 1 MKKLTIATRGSKLALWQSNHIKSVIES--QFSDVEVELKIIITSGDKILDVPLAKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ GE AVHS KD+PT + +GL +SA RED+RD +S +K L
Sbjct: 59 LFLKEIEESMLRGEAQMAVHSLKDVPTVMPQGLLLSAITVREDVRDAMLSEKYPDIKSLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GTSSLRR+ L++ R D+ + D RG ++TR+ KL + AI+LA AGI RL
Sbjct: 119 QGAVVGTSSLRRRMQLVQQRPDLVIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLGFS 178
Query: 183 KVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ +++ P+ GQGA+ IET N P E+ K + E++ ER F+ L
Sbjct: 179 NLVQYFYPIALDEMLPAMGQGALGIETV-NEPWVLEIAKFLEDENSRIETTIERGFVDTL 237
Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C+ I A + + + DG + +G A+ +
Sbjct: 238 QGGCQVPIGVSARVQPNGEVIVRSTLGMPDGSEVMGDEVVVAKGQTEGVGEAMAKRLIAQ 297
Query: 300 SNKNVF 305
+
Sbjct: 298 GAMELL 303
>gi|21225618|ref|NP_631397.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289767234|ref|ZP_06526612.1| porphobilinogen deaminase [Streptomyces lividans TK24]
gi|11386841|sp|Q9KY00|HEM32_STRCO RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName:
Full=Hydroxymethylbilane synthase 2; Short=HMBS 2;
AltName: Full=Pre-uroporphyrinogen synthase 2
gi|8246838|emb|CAB92889.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289697433|gb|EFD64862.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 313
Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 9 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLG-DLSQVEGKGAFT 65
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L
Sbjct: 66 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +
Sbjct: 126 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 185
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + T ER FL L G
Sbjct: 186 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 245
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG A L V DGK+ R D +G A + +
Sbjct: 246 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVAVALLRQGAR 305
Query: 303 NVFN 306
+ +
Sbjct: 306 EIID 309
>gi|296823866|ref|XP_002850512.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
gi|238838066|gb|EEQ27728.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
Length = 334
Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 154/318 (48%), Gaps = 17/318 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+P RIGTR S LA+ A + L + P H I L T GD+ N +L G K
Sbjct: 8 NRPLRIGTRRSNLAIIQAKAIQDQLQKL--APEHTFEIEALHTIGDKDQNSSLYNFGAKN 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
L+T E+E+ L SG++D VH KDMPTKL ++A R+D RD I SL+
Sbjct: 66 LWTTELEELLTSGKLDVVVHCLKDMPTKLPDSCDLAAIPLRDDPRDALIVKVGLPYTSLQ 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
L +V+GTSS+RR A L R ++ I+ RG +ETRL KL++ ++ I+++ G++
Sbjct: 126 SLPEGAVVGTSSVRRSAQLCRLFPNLRFINIRGNVETRLAKLDDPQSEYTCIIMSACGLE 185
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ I + + +D + GQGAI +E + K L+ + + + ERA
Sbjct: 186 RVGLGYRINQRIGSKDGGILHAVGQGAIGLEVRKGDTKILHLLDQLVDHKSSLACLAERA 245
Query: 236 FLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAIN 287
+ L+G C I G TL GIV++ DG E S + + +A
Sbjct: 246 LMRTLEGGCSVPIGVETEWIGDSEVYLTLRIRGIVISLDGSRSVEDSIDATVSTKDEATA 305
Query: 288 IGRDAAQYIRFISNKNVF 305
+G++ A + +
Sbjct: 306 LGQELAARLLEAGAATIL 323
>gi|154245106|ref|YP_001416064.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2]
gi|154159191|gb|ABS66407.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2]
Length = 317
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 121/292 (41%), Positives = 171/292 (58%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLAL A +++L + I + + T GD+I +R L+E GGKGLFT
Sbjct: 16 LRIGTRGSPLALWQAHAVQAALAVALGVEKEAIAVEVIKTSGDQIQDRALSEAGGKGLFT 75
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G +D AVHSAKD+ T L GL ++ YLPR D+RD I + +L DL +
Sbjct: 76 KEIEEALLDGRVDLAVHSAKDVATVLPDGLHLAGYLPRADVRDALILKSGAALADLPAGA 135
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRR+A L R R D+ V RG + TRL K+ + A LLA AG+ RL +
Sbjct: 136 KVGTASLRREAQLRRIRPDLKVELLRGNVHTRLAKVKDGDFDATLLALAGLTRLGMAQAA 195
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+L +DF P+ GQGA+ IE + +P + I DT ++ ERAFLA LDGSC+
Sbjct: 196 SCVLATDDFLPAVGQGAVAIECRIADPDTNAAIAAIACRDTGIALEAERAFLAALDGSCR 255
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ IAG A +G ++ G+VL+ DG E++ DA +G + +R
Sbjct: 256 TPIAGLATVEGESVRLRGLVLSPDGSDAAEIAELAPIADAARLGAECGARLR 307
>gi|120401860|ref|YP_951689.1| porphobilinogen deaminase [Mycobacterium vanbaalenii PYR-1]
gi|158513128|sp|A1T3D3|HEM3_MYCVP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119954678|gb|ABM11683.1| hydroxymethylbilane synthase [Mycobacterium vanbaalenii PYR-1]
Length = 312
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 149/310 (48%), Gaps = 14/310 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GD+ + + EIG G+FT
Sbjct: 2 IRIGTRGSLLATTQAGTVRDALIAA----GHDAELVIVSTEGDQRADAPIAEIG-VGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A RED RD ++ L +L S
Sbjct: 57 AALREAIADGLVDAAVHSYKDLPTAPDPRFMIAATPVREDARDALVARDGLVLGELPAGS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +
Sbjct: 117 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVARAGLARIGRLDAV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + +++ ++ DT ++ ER LAEL+ C
Sbjct: 177 TEALEPVQMLPAPAQGALAVECRAGDTALAQVLSQLDDADTRAAITAERTLLAELEAGCS 236
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V DG + G A +G A+ +
Sbjct: 237 APVGAIAEVVESIDEDGRVFEELSLRGCVATLDGSDVIRATGIGTPDRARELGLSVAEEL 296
Query: 297 RFISNKNVFN 306
+ +++ +
Sbjct: 297 FELGARDLLD 306
>gi|194212756|ref|XP_001501130.2| PREDICTED: similar to hydroxymethylbilane synthase [Equus caballus]
Length = 348
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 48/338 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ K R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMKVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLDISPXRGNLNTRLRKLDELQEFSAIILAAAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWQNRM-------------GQGALGVEVRAKDQDILDLVGVLHDPETLLCCLAERAFL 241
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
L+G C +A K LY G V + DG + + +G +
Sbjct: 242 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIHVPAQHEDGPEDNPQ 301
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 302 LVGITARNIPREAQLAAENLGISLANLLLSKGAKNILD 339
>gi|312141093|ref|YP_004008429.1| hydroxymethylbilane synthase hemc [Rhodococcus equi 103S]
gi|325674097|ref|ZP_08153787.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707]
gi|311890432|emb|CBH49750.1| hydroxymethylbilane synthase HemC [Rhodococcus equi 103S]
gi|325555362|gb|EGD25034.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707]
Length = 334
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 99/310 (31%), Positives = 152/310 (49%), Gaps = 15/310 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LA A R +L+ H ++ + TKGD +T + IG G+
Sbjct: 20 RTLRIGTRGSLLATTQAGHVRDALIAA----GHPAELVIIKTKGD-VTAGPVQRIG-VGV 73
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F E+ + L++GE+D AVHS KD+PT L I+A RED RD ++ L +L
Sbjct: 74 FVAELREALVAGEVDVAVHSYKDLPTAQPDDLTIAAVPTREDPRDALVARDGLVLGELPP 133
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S IGTS+ RR+A L + + RG I+TRL K+ + + AI++A AG+ R+ + +
Sbjct: 134 GSRIGTSAPRRRAQLRAMGLGLEIEPLRGNIDTRLGKVASGELDAIVIARAGLSRIGRTE 193
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L P+P QGA+ +E +NP ++ ++ T +V ERA LAEL+
Sbjct: 194 RITETLEPVQMLPAPSQGALAVECRSDNPDLIAILGELDDHATRAAVVAERALLAELEAG 253
Query: 244 CKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C + + A L G A DG S G+ A +GR A+
Sbjct: 254 CTAPVGAIAEVVESLDDDGRVFEELSIRGCAAAIDGSDVIRASLVGSPERADELGRAVAR 313
Query: 295 YIRFISNKNV 304
+ + +++
Sbjct: 314 ELLDLGARDL 323
>gi|87200799|ref|YP_498056.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM
12444]
gi|87136480|gb|ABD27222.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM
12444]
Length = 312
Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 161/303 (53%), Gaps = 6/303 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P ++GTR SPLA+A A E R+ L H + ++P++ GD+I +R L +IGGK
Sbjct: 7 QRPLKLGTRRSPLAMAQAEEARARLCAAHGWAESQVELVPVTASGDKIQDRPLADIGGKA 66
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
L+T+E++ L+SGEID AVHS KD+ T + I+A LPR D+RDV I A S+ +
Sbjct: 67 LWTKELDAWLVSGEIDFAVHSMKDVETIRPENFAIAAVLPRADVRDVLI--GAASIHAIP 124
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL +
Sbjct: 125 PGARVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLAKLQAGEADVTLLAAAGLGRLGET 184
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + E + P+P QGAI IE + + I+ + T ++ ERA L L G
Sbjct: 185 GVGHPLSEYE-WLPAPAQGAIGIECLASRADLCAWLGAIDDKPTHHAIRAERALLLALGG 243
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYIRFISN 301
+C S IA S+L + + DG E D + G A + +
Sbjct: 244 NCHSPIAVLTTHHESSLTLRAALFSPDGAERVEAHETFAAGD--DAGPAHLAHRLLGEAP 301
Query: 302 KNV 304
+
Sbjct: 302 DAI 304
>gi|87117972|gb|ABD20293.1| HemC [Shigella boydii]
Length = 272
Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats.
Identities = 97/267 (36%), Positives = 145/267 (54%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T GD I + L ++ GKGLF +E++ L+ D AVHS KD+P + +
Sbjct: 6 PGLVVELVPMVTPGDVILDTPLAKVCGKGLFVKELDVALLENRADIAVHSMKDVPVEFPQ 65
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG
Sbjct: 66 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +N+ +
Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEVSLPAVGQGAVGIECRLNDTR 185
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ L+ +NH +T V ERA L+G C+ I +A ++ +V A DG
Sbjct: 186 TRALLAALNHNETALRVTAERAMNTRLEGGCQVPIGSYAELVDGEIWLLALVGAPDGSQI 245
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300
R G+ DA + A+ +
Sbjct: 246 IRGERRGSPQDAEQMSVSLAEELLNNG 272
>gi|154505786|ref|ZP_02042524.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149]
gi|153793804|gb|EDN76224.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149]
Length = 295
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 6/301 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIG+R S LA+ + + P + I+ + T GDRI +R+L +IGGK
Sbjct: 1 MKTVIRIGSRESRLAVTQTEIIKGQIEA--HFPHIRVEIVTMKTTGDRILDRSLEQIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+++ L G +D +VHS KDMP + + L I AY RED RDV I Q +
Sbjct: 59 GLFVKELDQALRKGRVDLSVHSLKDMPMDIPEDLPILAYSKREDPRDVLIFR--QGQTES 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+IGTSS RR+ L R D RG ++TRL KL A +LA AG+KRL
Sbjct: 117 ISGGMIGTSSKRRRLQLERLYPDCHFQGIRGNVQTRLRKLEEEGFCATVLAAAGLKRLGM 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + E+ P+ GQG + ++ + QEL++V+N + + ERAF+ L+
Sbjct: 177 DSCIGRYFSCEEMIPAAGQGILAVQARAG--EYQELLEVLNDPRSEAAAKAERAFVKVLN 234
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C S +A +A +GS + G+ + + +GN+ +A +G A ++
Sbjct: 235 GGCTSPVAAYAEIRGSKCHITGLYWRESDENWFVEKTSGNKKEAELLGETLAHNMQKKYG 294
Query: 302 K 302
K
Sbjct: 295 K 295
>gi|289615845|emb|CBI57434.1| unnamed protein product [Sordaria macrospora]
Length = 338
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 153/320 (47%), Gaps = 18/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K
Sbjct: 5 QKQTVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------- 114
GL+T E+E KL + E+D VH KD+PT L +G +I RED RDV +
Sbjct: 62 GLWTNELEAKLFNNEVDFIVHCLKDVPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 121
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+ L DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A
Sbjct: 122 YKVLADLPEGAIVGTSSVRRAAQLRRQYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 181
Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T +
Sbjct: 182 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 241
Query: 231 NCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFH---EVSRNGNRCDAI 286
ERA + L+G C I + + L V++ DGK V +A
Sbjct: 242 FAERAVMRSLEGGCSVPIGVETKWVEDDKLQLKATVVSLDGKESVDGQSVEVVKTTEEAE 301
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GR A+ + + + +
Sbjct: 302 EMGRKLAEDLAKRGAQKILD 321
>gi|326201521|ref|ZP_08191392.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782]
gi|325988121|gb|EGD48946.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782]
Length = 297
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 88/294 (29%), Positives = 153/294 (52%), Gaps = 7/294 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKG
Sbjct: 5 MKKIRIGSRDSKLAIIQSEMVMAAIREF--DPDIELELITMKTTGDKILDKTLDKIGGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++ L + E+D VHS KDMP + L + A RED RD F+ + +
Sbjct: 63 LFVKELDYALYNNEVDITVHSYKDMPLEDNPELPVVAVSKREDPRDAFVLPQGE---NTE 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 120 NNEPIGSSSQRRQLQLKALFPNHKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLE 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++++ P+ QG I ++ + + +K+ + E++ + ER F+ E++G
Sbjct: 180 SRISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISHAERTFVREMNG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + IA +A S + G+ + +G+R + + +G + + +
Sbjct: 238 GCSTPIAAYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKM 291
>gi|285019346|ref|YP_003377057.1| hydroxymethylbilane synthase [Xanthomonas albilineans GPE PC73]
gi|283474564|emb|CBA17065.1| probable hydroxymethylbilane synthase protein [Xanthomonas
albilineans]
Length = 302
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 114/289 (39%), Positives = 161/289 (55%), Gaps = 4/289 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RI TR SPLAL + + L H P ++++P+ST+GD + +R+L IGGKG
Sbjct: 1 MKILRIATRKSPLALWQSEYVAACLRRAH--PQLEVLLVPMSTRGDEVLDRSLAAIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E ++ G+ DCAVHS KD+P +L + +SA LPR D D IS+ +L L
Sbjct: 59 LFLKELELAMLRGDADCAVHSLKDVPMELERPFVLSAILPRADSADALISNLYAALDALP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL E
Sbjct: 119 LGARVGTSSLRRQAQLRARRPDLQLLDLRGNVNTRLAKLDNGDYDAIVLACAGLQRLGLE 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I + L D+ P+P QGAI +E + A L V++ T V ERA L G
Sbjct: 179 RRITQRLQAPDWLPAPAQGAIAVECRQDMAAACALFAVLDDVATRTCVEAERAMNRALHG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGR 290
SC +A FA +G L G+V DG + D +G+
Sbjct: 239 SCHVPVAAFAQWRGEDLLLQGLVGDVADG-RLVRAQIQRSAQDPQALGQ 286
>gi|296123437|ref|YP_003631215.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776]
gi|296015777|gb|ADG69016.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats.
Identities = 96/316 (30%), Positives = 144/316 (45%), Gaps = 18/316 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A SL + P + ++ ++T GDR+ L + GG+G+FT
Sbjct: 4 LRIATRASQLALWQANFVADSLRSL--DPELTVELVHVTTTGDRVQGEPLRQFGGQGVFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---- 121
E++ L+ G D AVHS KD+PT GL+++A R + D + T S
Sbjct: 62 REVQAALLEGRADIAVHSLKDLPTVPTAGLELAAVPARAPVADALLLPTGHSGPASLAML 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGT S RR+A LLR R D+ + RG ++TR+ KL+ + ++LA AG+ RL
Sbjct: 122 PRGARIGTGSPRRQAQLLRIRPDLVCSEVRGNLDTRIRKLDAGEYEGLILAVAGLSRLGW 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I IL P+ GQGA+ +E + V + T +V+ ERA L L+
Sbjct: 182 SDRISLILAPPTMFPAAGQGALGLECRHGDEATIRWVSQLEDRQTRLAVDAERAVLRTLE 241
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEV--SRNGNRCD---------AINIG 289
C + + +A K TL+ I++A DG S G A +G
Sbjct: 242 AGCHAPVGTWASWKSPETLHLEAILIAPDGSETLAAASSMQGPLSQYGSGNALDAAHELG 301
Query: 290 RDAAQYIRFISNKNVF 305
+ A +
Sbjct: 302 ANVAHLLLKQGASRYL 317
>gi|91205161|ref|YP_537516.1| porphobilinogen deaminase [Rickettsia bellii RML369-C]
gi|157827501|ref|YP_001496565.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389]
gi|122990935|sp|Q1RJN7|HEM3_RICBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166217782|sp|A8GXC8|HEM3_RICB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91068705|gb|ABE04427.1| Porphobilinogen deaminase [Rickettsia bellii RML369-C]
gi|157802805|gb|ABV79528.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389]
Length = 300
Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats.
Identities = 109/296 (36%), Positives = 161/296 (54%), Gaps = 4/296 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR S LAL + P N I+ ++T GD I N+ L +IGGK L
Sbjct: 3 NSIRIGTRKSKLALTQTNLVIEQIKQ--HFPNINCEIVEITTSGDLIQNKPLYDIGGKAL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L++ ++D AVHS KD+P + K L I A L RED RDVF+ T +S+++L
Sbjct: 61 FLKEIEQALLNKKVDLAVHSLKDVPGIIPKDLSIEAVLEREDSRDVFVCLTHKSIEELPK 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
++VIGTSS+RRK + R R D+ +I FRG +++R+NKL N + A +LAYAG+KRL
Sbjct: 121 NAVIGTSSVRRKLCVQRMRPDLEIIVFRGNVDSRINKLINKEVDATILAYAGLKRLNAFN 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ P GQG I IE ++ E+ K INH T++ + ERA L LD
Sbjct: 181 PEYCHLIEHSQMLPCIGQGVIAIEIRKDDHDMIEICKQINHLPTFELIKPERALLEYLDA 240
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+C++ I ++ Y + ++ DG + N + G AA+ +
Sbjct: 241 NCRTPIGAYSKYLDNGDIQTDFMLGNLDGSKIAFHTEISNPKTSKESGIKAAKVML 296
>gi|61653263|gb|AAX48216.1| porphobilinogen deaminase [uncultured proteobacterium
DelRiverFos06H03]
Length = 314
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 103/311 (33%), Positives = 150/311 (48%), Gaps = 15/311 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + I TR S LAL A + L H + ++ ++T GD+I ++ L++IGG
Sbjct: 1 MTSQ-LIIATRESRLALWQANHVKELLE----CQGHQVELLGMTTLGDQILDQPLSQIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L G AVHS KD+P L +G +++ L RED RD ++S +SL
Sbjct: 56 KGLFIKELEVALADGSAHLAVHSLKDVPMDLPEGFELACILEREDPRDAWVSPRFESLDS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR LL R D+ + RG ++TRL KL+ + I+LA AG+KRL
Sbjct: 116 LPPGAVVGTSSLRRTVLLKALRPDLKIEPLRGNLDTRLRKLDEGQYAGIVLASAGLKRLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+ + P+ GQGAI IE P L+ +NH T V ER +
Sbjct: 176 LKDRIRYSFPLNTMTPAAGQGAIGIEICDKRPDLAHLLSNLNHLPTAVQVYAERGVSRTM 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI----------FHEVSRNGNRCDAINIGR 290
GSC +A A + L + I K +S + A +G+
Sbjct: 236 GGSCSMPLAAHATLETGLLSIHAIWGDPQLKATSLIHAHQQCTLNMSASDVLSQATELGK 295
Query: 291 DAAQYIRFISN 301
AQ +
Sbjct: 296 QVAQKLIAKGA 306
>gi|257124843|ref|YP_003162957.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b]
gi|257048782|gb|ACV37966.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b]
Length = 322
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 114/318 (35%), Positives = 168/318 (52%), Gaps = 22/318 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44
M+ IGTR S LALA A + + L+ + K P I + +
Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIKKYDELRENENFCEIEGFDKKNPLEIELKVIV 60
Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101
TKGD+ R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + +
Sbjct: 61 TKGDKDL-RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFP 119
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
RED RDV +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL
Sbjct: 120 MREDNRDVLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179
Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
++ + AI+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K + L+K+I
Sbjct: 180 DDGEYDAIVLAAAGLKRVGLENRITEYFDKDSFMPAPGQGILCIQCRENDNKIRHLLKII 239
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
N ++ ER F DG C + I + +G+TL G+ +G + GN
Sbjct: 240 NDDEVTIMCKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGM-FNDNGIRIFK-EVEGN 297
Query: 282 RCDAINIGRDAAQYIRFI 299
R + + A+ I+
Sbjct: 298 RENPKETAQKLAEEIKKE 315
>gi|17547076|ref|NP_520478.1| porphobilinogen deaminase [Ralstonia solanacearum GMI1000]
gi|24211753|sp|Q8XWW3|HEM3_RALSO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|17429377|emb|CAD16064.1| probable porphobilinogen deaminase (pbg)
(hydroxymethylbilanesynthase) (hmbs)
(pre-uroporphyrinogen synthase) protein [Ralstonia
solanacearum GMI1000]
Length = 334
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 21 KLVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L
Sbjct: 79 VKELEVALAEGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL +
Sbjct: 139 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSER 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC
Sbjct: 199 IRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHAPTALAVTAERAVSRQLGGSC 258
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIRFIS 300
+ +A FA L V + DG+ + +A +G AQ +
Sbjct: 259 QVPLAAFAQWTDAGALRLRAFVASPDGRRKLAAEAEATPATPAEAEALGARVAQQMLDGG 318
Query: 301 NKNVF 305
++
Sbjct: 319 AHDIL 323
>gi|149240385|ref|XP_001526068.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239]
gi|146450191|gb|EDK44447.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239]
Length = 347
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 20/317 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG R S LA+ + + ++ ++ P I+ LST GD++ + L GGK L+T
Sbjct: 20 LQIGGRKSKLAVVQSQLVQQAIQKIY--PDLPSSILALSTLGDKVQTQPLYTFGGKSLWT 77
Query: 66 EEIEKKLISGEID------CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116
+E+E L+ G D VHS KDMPT L + ++ RED RD + +
Sbjct: 78 KELEILLMDGIDDEFPRLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSPYK 137
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174
L+DL S++GTSS+RR + L++ + RG I+TRLNKL++ N ++LA A
Sbjct: 138 YLRDLPAGSIVGTSSIRRSSQLIKNYPHLKFESVRGNIQTRLNKLDDPSNPYCCLILASA 197
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ RL I +++ + GQGA+ IE ++ + +E++K I ER
Sbjct: 198 GLIRLGLGGRITSC--LDEVYYAVGQGALGIEIRKDDHQVKEILKKIEDPVATICCLAER 255
Query: 235 AFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIG 289
+ + L+G C + + ST L GI+++ DG E +R D +G
Sbjct: 256 SLMRYLEGGCSVPLGVHSEYNESTKKLTLKGIIVSPDGSKSIEDEVTKTIESREDCEAVG 315
Query: 290 RDAAQYIRFISNKNVFN 306
D ++ K + +
Sbjct: 316 IDLGDRLKAKGAKEILD 332
>gi|297156263|gb|ADI05975.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1]
Length = 315
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+ +GGKG FT
Sbjct: 11 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMG-DLSALGGKGAFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD + +L L
Sbjct: 68 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAYLKRDDIRDAVVHPGGLTLDQLPE 127
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL KL+ + A+LLA +G++R+ +
Sbjct: 128 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLDAGECDALLLAVSGLERIGRTD 187
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I EIL +E P G G + ++ ++ + V + D W + ER L L G
Sbjct: 188 RISEILPVETMCPPIGAGVLALQCREDDTATIDAVSGLGDADAWKEITAERMLLHVLQGH 247
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 248 CNSPIAGYARAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 307
Query: 303 NVFN 306
V +
Sbjct: 308 EVID 311
>gi|297172436|gb|ADI23410.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0770_28K04]
Length = 311
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 5/304 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F +GTR S L+LA S L + P I ++T GD T R L I KG+F
Sbjct: 2 TFLVGTRGSKLSLAQTNWVISELQKQN--PGSEFEIKTITTNGDTDT-RALFTIDQKGIF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L+
Sbjct: 59 EKEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGFNLKTIPLN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL + V
Sbjct: 119 AVVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGLD-V 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C
Sbjct: 178 KHSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIESERALSDYVESGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + A L + DGK + + G+ N+G+ + ++ I +
Sbjct: 238 RFPVGALAIANSGMLKLTVTAYSVDGKKSITIEKTGDIDKPRNLGQGVGEELQKIGIAEI 297
Query: 305 -FNF 307
N+
Sbjct: 298 ASNW 301
>gi|302549045|ref|ZP_07301387.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
gi|302466663|gb|EFL29756.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
Length = 311
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRTELAAAH--PGVRTEVVPVKTTGDKWMG-DLSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDIRDALIHPDGLTLDELPA 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++
Sbjct: 124 GTRIGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLAAKEADALLLAVAGLERIGRQD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI EIL+ E P G G + ++ ++ + V + DT+ ER FL L G
Sbjct: 184 VISEILSTETMMPPIGAGVLALQCREDDADLIDAVSGLGDPDTYRETMAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAGFA+ L V DGK R D +G A + +
Sbjct: 244 CNSPIAGFAHVDRSGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 EIID 307
>gi|299066045|emb|CBJ37226.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia
solanacearum CMR15]
Length = 334
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 6/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF
Sbjct: 21 KLVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 78
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L
Sbjct: 79 VKELEVALAEGRADLAVHSLKDVPMELPPGFALSAILEREDPRDAFVSNDYADLAALPAG 138
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL
Sbjct: 139 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSAR 198
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC
Sbjct: 199 IRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHVPTTLAVTAERAVSRQLGGSC 258
Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIRFIS 300
+ +A FA L V + DG + +A +G AQ +
Sbjct: 259 QVPLAAFAQWTDAGALRLRAFVASPDGSRKLAAEAEATPATPAEAEALGARVAQQMLDGG 318
Query: 301 NKNVF 305
++
Sbjct: 319 AHDIL 323
>gi|95931480|ref|ZP_01314180.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684]
gi|95132465|gb|EAT14164.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684]
Length = 313
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 108/309 (34%), Positives = 170/309 (55%), Gaps = 9/309 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +IGTR S LAL A+ L D + I+ + T+GD++ + ++ +IG
Sbjct: 1 MSTK-IKIGTRRSKLALWQAYYVEQLLQDA----GMDTEIVEIDTRGDQVLDVSIAKIGS 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-K 119
KG+FTEE+E +L SG+ID AVHSAKDM ++L +G +I A+ RE + DV +S
Sbjct: 56 KGVFTEELEDQLRSGDIDIAVHSAKDMQSELPEGFEIIAFTIREKVNDVVVSRDKSIRLG 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
D + IG+SS+RR+A+L + +++I+ RG ++TR+ K+++ + AILLAYAG+ R+
Sbjct: 116 DTSRPLTIGSSSVRRRAILKAYYPHLNIIEMRGNLQTRIGKMDDGQCDAILLAYAGVNRM 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ +I E L +E F P GQG++ IE +++ K + + K +NH DT + ERAFL
Sbjct: 176 EYNDLIVETLPLEQFIPPVGQGSVAIESAINLDAKKRETIRKAVNHPDTEFRLLAERAFL 235
Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C A + L G +++ DG+ + G R DA +G A
Sbjct: 236 KTLKGGCSIPAFCMAELEGDDQLKVTGGMISLDGQTLIKNVLTGARSDAEQLGDQMANLT 295
Query: 297 RFISNKNVF 305
+
Sbjct: 296 LEQGGAQIL 304
>gi|296327549|ref|ZP_06870095.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155375|gb|EFG96146.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 298
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 108/300 (36%), Positives = 144/300 (48%), Gaps = 7/300 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P + I + T GD+ ++I
Sbjct: 1 MKKNIIIGSRGSILALAQANLVKDRLQ--GNYPNLSFEIKEIVTSGDKDLKSNWENSDIS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE+KL+ GEID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQKLLDGEIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E LN E FPP+P QG + I+ N+ + ++ +K I++E V ER F
Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKFLKSIHNETVAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F V + +GK + I A+ I+
Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IRAVVEDDLAKGKEIAHMVAEEIKNK 295
>gi|329114337|ref|ZP_08243099.1| Porphobilinogen deaminase [Acetobacter pomorum DM001]
gi|326696413|gb|EGE48092.1| Porphobilinogen deaminase [Acetobacter pomorum DM001]
Length = 406
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 108/317 (34%), Positives = 162/317 (51%), Gaps = 15/317 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62
P R+GTR SPLAL ++L + ++T GD++ NR L EIGGKG
Sbjct: 88 PLRVGTRGSPLALVQTRAFLTTLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIGGKG 147
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
LF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I + D
Sbjct: 148 LFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLAQSDPD 207
Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+++G +S+RR+A +L R D+ RG ++TRL+KL ++ A LLA AG
Sbjct: 208 DPYSALPEGALVGCASVRRQAQMLHVRPDLQFGLLRGNVQTRLDKLAAHQCQATLLALAG 267
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KRL + +L+ P+ GQG + + ++ + +EL+ I + ER+
Sbjct: 268 LKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDVELRELLSAIEDYEARAVATAERS 327
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LAELDGSC++ I G+A K L+ G+V DG + S G DA +G
Sbjct: 328 LLAELDGSCRTPIGGYAQLLPAEEGKDPKLHLTGLVAREDGSFLLKRSITGMPEDAARLG 387
Query: 290 RDAAQYIRFISNKNVFN 306
++ + +R S ++F
Sbjct: 388 KELGESLRKDSPSDIFE 404
>gi|83945095|ref|ZP_00957461.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633]
gi|83851877|gb|EAP89732.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633]
Length = 320
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 171/305 (56%), Gaps = 8/305 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR SPLA+A + ++ L H K P + I+ ++T GDRIT+R L GGKGLFT
Sbjct: 8 IATRTSPLAMAQTLDVQARLAKAHGEKDPEESFPILGMTTTGDRITDRALLLAGGKGLFT 67
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124
+E+E+ L+ G+ AVHS KD+PT L GL+I+ L RED RD ++ ++DL
Sbjct: 68 KELERALLDGDARFAVHSMKDVPTTLPDGLEIACVLEREDPRDTLLTRDGISRIEDLPQG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S+RR++ L R D++++ RG ++TRL KLN+ + A LA AG++RL +E+
Sbjct: 128 ATLGTASIRRQSQALALRPDLNIVLLRGNVDTRLEKLNSGEVDATFLARAGLRRLGREQA 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L + P+P QGA+ IE ++ +A++ ++ +NH T ++ ER FL LDGSC
Sbjct: 188 ELPPLELTAVIPAPAQGAVGIEIRSDDVEARKALEPLNHLPTRIAIAAERGFLQALDGSC 247
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-----NRCDAINIGRDAAQYIRFI 299
++ IA A +G+ ++ G L DG + A +G + ++
Sbjct: 248 RTPIAAHATLEGAEIHLRGEALMPDGSKRWANETRAQLPELDPDAARLLGYELGLEVKRA 307
Query: 300 SNKNV 304
+
Sbjct: 308 GGDTL 312
>gi|258541892|ref|YP_003187325.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01]
gi|256632970|dbj|BAH98945.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01]
gi|256636027|dbj|BAI01996.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-03]
gi|256639082|dbj|BAI05044.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-07]
gi|256642136|dbj|BAI08091.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-22]
gi|256645191|dbj|BAI11139.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-26]
gi|256648246|dbj|BAI14187.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-32]
gi|256651299|dbj|BAI17233.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654290|dbj|BAI20217.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-12]
Length = 357
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 108/317 (34%), Positives = 162/317 (51%), Gaps = 15/317 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62
P R+GTR SPLAL ++L + ++T GD++ NR L EIGGKG
Sbjct: 39 PLRVGTRGSPLALVQTRAFLTTLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIGGKG 98
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
LF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I + D
Sbjct: 99 LFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLAQSDPD 158
Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
++IG +S+RR+A +L R D+ RG ++TRL+KL ++ A LLA AG
Sbjct: 159 DPYSALPEGALIGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAAHQCQATLLALAG 218
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KRL + +L+ P+ GQG + + ++ + +EL+ I + ER+
Sbjct: 219 LKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDIELRELLSAIEDYEARAVATAERS 278
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LAELDGSC++ I G+A + L+ G+V DG + S G DA +G
Sbjct: 279 LLAELDGSCRTPIGGYAQLIPIVAGEDPKLHLTGLVAREDGSFLLKRSITGLPEDAARLG 338
Query: 290 RDAAQYIRFISNKNVFN 306
++ + +R S ++F
Sbjct: 339 KELGESLRKDSPSDIFE 355
>gi|118474504|ref|YP_891866.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40]
gi|158512506|sp|A0RNT3|HEM3_CAMFF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118413730|gb|ABK82150.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40]
Length = 303
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 157/300 (52%), Gaps = 6/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I +R S LAL R L+ H++ II + TKGD I + L +IGGKGLFT
Sbjct: 3 IKIASRNSALALWQTHHIRDLLIAQ----GHSVEIITMKTKGDVILDTPLAKIGGKGLFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E ++ G D AVHS KD+PT GL+++ RED+RD +S ++L +L +
Sbjct: 59 KELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDAMLSMKYKNLDELPQGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT+SLRRK +L R+D+ +I RG + +R+ KL N + AI+LA AGI RL K +
Sbjct: 119 KVGTTSLRRKMQILAHRADLDIISLRGNVNSRIAKLKNGEFDAIILAMAGINRLNLSKEV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K I+ P+ GQGA+ IE + + + ++ +N E + ER F+ L+G C+
Sbjct: 179 KFTSAIDTI-PAMGQGALGIEAI-DKKEILDAIEFLNDEKSVVETTIERDFVHTLNGGCQ 236
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ I A KG + I+ DG S+ + G++ A K +
Sbjct: 237 APIGINAKLKGDKIEVEAILGLVDGSEILRDSKTYPKLAYKIAGKNFADEFIARGAKELL 296
>gi|145254797|ref|XP_001398757.1| porphobilinogen deaminase [Aspergillus niger CBS 513.88]
gi|134084341|emb|CAK48681.1| unnamed protein product [Aspergillus niger]
Length = 334
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 155/315 (49%), Gaps = 12/315 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F IGTR S LAL +++L P + I T GD+ T L + K
Sbjct: 13 SRKTFTIGTRKSKLALLQTDLVQAALKQ--TWPDYEFKIHSRETAGDQNTTIALRDFTTK 70
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118
L+T+E+E LI+G++D VHS KD+PT L + + RED RDV + SL
Sbjct: 71 NLWTQELEDLLIAGQVDFIVHSLKDVPTLLPSSCTLGPMMKREDTRDVLVMKKGLSYTSL 130
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + V+D RG I TRL+KL+ + ++LA AG+
Sbjct: 131 AELPEGSVVGTSSIRRTAQLARRYPHLKVMDVRGNIGTRLSKLDAEDGPFTCLILAAAGL 190
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL I L+ ++ + GQGA+ IE ++ + ++++ I H++T + ER
Sbjct: 191 LRLDLGDRITSYLDSKNGGMLYAVGQGALGIEIRKDDQQVLDMLQNIGHKETTFACLAER 250
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRD 291
+ L L+G C + + + L IV++ DGK EV +G A G
Sbjct: 251 SLLRTLEGGCSAPLGVESEWVNGALTMRSIVVSVDGKESAEVEVDGAVDSPQAAEEFGVT 310
Query: 292 AAQYIRFISNKNVFN 306
A+ + + +
Sbjct: 311 VAKALVEKGAGKILD 325
>gi|460692|dbj|BAA05861.1| porphobilinogen deaminase [Clostridium josui]
Length = 295
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 9/296 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKG
Sbjct: 5 MKKIRIGSRDSKLAIIQSELIMSAIRKY--DPDIELELITMKTTGDKILDKTLDKIEGKG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++ L + E+D VHS KDMP + L + A RED RD FI ++
Sbjct: 63 LFVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFILP-----QNGE 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 118 NGEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G
Sbjct: 178 SRIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNG 235
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + IA +A +GS + G+ + +GNR + + +G + + ++
Sbjct: 236 GCSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMKS 291
>gi|264679667|ref|YP_003279574.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2]
gi|262210180|gb|ACY34278.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2]
Length = 314
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 8/289 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF
Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +
Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I
Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 187 RARFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGR 290
+A + +G TL+ +G V + D A +G
Sbjct: 247 MPLAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQASAQVTDFASANALGE 295
>gi|315638143|ref|ZP_07893325.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21]
gi|315481679|gb|EFU72301.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21]
Length = 308
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 96/305 (31%), Positives = 148/305 (48%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR SPLAL + L H + + STKGD + + L +IGGKG
Sbjct: 1 MKKLIIATRKSPLALWQSEFVADILRKTHH---IEVDLEGFSTKGDILLDSPLAKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L
Sbjct: 58 LFTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180
++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + + AI+LA AG+KRL
Sbjct: 118 QNAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKDGEFDAIILASAGVKRLGLE 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + ++ P+ QG + I++ N + L++ +N E + ER F+ L
Sbjct: 178 SEVKFIYRFSKDELVPAATQGILGIQSP-NKSEILTLLQCLNDEKSLIESTVERDFIRTL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A G + I+ DG R + + G A
Sbjct: 237 EGGCQVPIGINAELIGEQITVRSILGLPDGSEILRDKRIILKKNYQGFGERLALEFIKRG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELL 301
>gi|25453441|sp|Q59293|HEM3_CLOJO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 291
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 9/296 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKG
Sbjct: 1 MKKIRIGSRDSKLAIIQSELIMSAIRKY--DPDIELELITMKTTGDKILDKTLDKIEGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++ L + E+D VHS KDMP + L + A RED RD FI ++
Sbjct: 59 LFVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFILP-----QNGE 113
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 114 NGEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLE 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G
Sbjct: 174 SRIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNG 231
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + IA +A +GS + G+ + +GNR + + +G + + ++
Sbjct: 232 GCSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMKS 287
>gi|242015312|ref|XP_002428308.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis]
gi|212512893|gb|EEB15570.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis]
Length = 356
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 107/340 (31%), Positives = 163/340 (47%), Gaps = 37/340 (10%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++G+R S LAL+ + L + P I+ + T GD+I ++ L +IG
Sbjct: 1 MTDSNLLKVGSRKSQLALSQTQIIVNQLKE--NFPDLKFDIVTMLTTGDKILDKPLPKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQ 116
K LFT+E+E L E+D VHS KD+PT L L I A L RED RD + + +
Sbjct: 59 EKSLFTKELEAALEKNEVDFVVHSLKDLPTSLPPNLTIGAILKREDPRDALVVNKNLNFK 118
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAG 175
++ L SVIGTSSLRR A L R ++ V + RG + TRL KL+ I+LA AG
Sbjct: 119 NVSSLPESSVIGTSSLRRCAQLCRNYPNLKVENIRGNLNTRLKKLDEGDKYTGIVLAAAG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+KRLK + I +IL + + GQGA+ +E + NN K ++++V+N T V ER+
Sbjct: 179 LKRLKYDDRITQILEPNEMLYAVGQGALAVECNKNNEKVLDILEVLNDHSTILRVIAERS 238
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD----------- 284
FL L G C + +A + LY G V + +G+ + +++
Sbjct: 239 FLKTLGGGCSAPVAVSTKLEEKELYLTGAVWSLNGEKHIQKTKSVTISSDEPLRKKSRVM 298
Query: 285 -------------------AINIGRDAAQYIRFISNKNVF 305
+ N+G AQ + + N+
Sbjct: 299 GESHAEITARNISNNDLNLSENLGILLAQDLIKLGALNII 338
>gi|118472022|ref|YP_885356.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155]
gi|118173309|gb|ABK74205.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155]
Length = 318
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 143/318 (44%), Gaps = 18/318 (5%)
Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M R+GTR S LA A R +L+ H ++ +ST+GDR + +
Sbjct: 1 MANNRDSVIRLGTRGSLLATTQAGTVRDALLAA----GHPCELVIISTEGDRNQG-PIAD 55
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IG G+FT + + + G +D AVHS KD+PT + I A RED RD ++
Sbjct: 56 IGI-GVFTAALREAIHDGRVDMAVHSYKDLPTASDERFCIPAIPRREDPRDALVARDGLV 114
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L SVIGTSS RR A L + + RG ++TRLN++ + + I++A AG+
Sbjct: 115 LGELPTGSVIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVTSGELDGIVVARAGLA 174
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + V+ E L P+P QGA+ +E + + ++ ++ DT +V ER L
Sbjct: 175 RIGRLNVVTETLEPVQMLPAPAQGALAVECRAGDTELIAILSELDDADTRAAVTAERVLL 234
Query: 238 AELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
AEL+ C + + A L G DG S G A +
Sbjct: 235 AELEAGCSAPVGAIAEVVESIDEDGNVFEELSLRGCAATLDGSDVIRASGIGTPDRAAEL 294
Query: 289 GRDAAQYIRFISNKNVFN 306
G A + + + +
Sbjct: 295 GVSVAAELFDLGARELLE 312
>gi|325846167|ref|ZP_08169236.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481646|gb|EGC84682.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 779
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 92/300 (30%), Positives = 143/300 (47%), Gaps = 4/300 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG+R S LAL A + L I+ +STKGDRI +R + ++ KG+F
Sbjct: 2 IKIGSRASKLALIQANMVKDILEK----EGLEAQIVEISTKGDRIRDRKIDQLNSKGVFV 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D ++
Sbjct: 58 REIEEKLLDKTIDLAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDIFKKMDDLNNA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR + ++I RG +ETR+ K+ + ++LA +G+ R + I
Sbjct: 118 LVGTGSNRRVCQGKNYFTNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ F PSP QG + IE + K E+ K + E T + ERAF EL C
Sbjct: 178 NFDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCS 237
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ + F + G + + +GN D IN+ + A+ ++ S K +
Sbjct: 238 TPMGIFTEIDHDKITLTGSMAFDKDDRINYEKVSGNISDRINLAQKLARTLKKKSYKKII 297
>gi|121713720|ref|XP_001274471.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL
1]
gi|119402624|gb|EAW13045.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL
1]
Length = 339
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 153/320 (47%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F IGTR S LAL+ S+L + P + I T GDR T L E K
Sbjct: 13 SRKTFTIGTRSSKLALSQTDLIASALKK--RWPDYTFEIHSRETAGDRNTTIALREFTTK 70
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+T+E+E+ L++G++D VHS KD+PT L + RED RDV +
Sbjct: 71 NLWTQELEELLMAGDVDLIVHSLKDVPTLLPSSCTLGPMTEREDSRDVLVMKKGLPRMSL 130
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
++ SV+GTSS+RR A L R + + D RG I TRL KL+ I+LA AG+
Sbjct: 131 SEMPEGSVVGTSSIRRTAQLARRYPHLKIQDVRGNIGTRLAKLDAEDSPFTCIILAAAGL 190
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL + I + L+ ++ + GQGA+ +E ++ E+++ I H++T + ER
Sbjct: 191 LRLGLDDRITQYLDSKNGGMLYAVGQGALGVEIRKDDQLLHEMLQTIGHKETTLACLAER 250
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
+ L L+G C + + L +V++ DG+ E+ +G+ +A
Sbjct: 251 SLLRTLEGGCSAPLGVETEWVKDSTGASKLRMRAVVVSVDGRESAEIEVDGSIDTNEEAE 310
Query: 287 NIGRDAAQYIRFISNKNVFN 306
N G A+ + +
Sbjct: 311 NFGVTVAKSLVEKGAGKILE 330
>gi|315497777|ref|YP_004086581.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48]
gi|315415789|gb|ADU12430.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48]
Length = 314
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 113/309 (36%), Positives = 172/309 (55%), Gaps = 8/309 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIV---IIPLSTKGDRITNRTLTEIGGK 61
+IGTR S LA + + + P + ++ ++T+GDRI +R L E GGK
Sbjct: 5 LKIGTRGSRLATTQCGWVQRQIVTALGHDPALSHEVAPLVIITTQGDRIQDRRLIEAGGK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT+EIE L+SGE+D AVHS KDMP + + GL + A+ RED RD F+S +SL+DL
Sbjct: 65 QLFTKEIEDALLSGEVDVAVHSLKDMPAEDIPGLSLCAFPVREDPRDAFVSLKYRSLEDL 124
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT+SLRR+A L R D+ V+ RG ++TRL+KL A+LLA AG+KR+
Sbjct: 125 PQGAKLGTASLRRQAQALAVRPDLEVVMLRGNVDTRLSKLEAGHCDAMLLAAAGLKRMGL 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E IK ++ + FP +PGQGA+ I+ N QE +K ++H +T ++ ER L L+
Sbjct: 185 EAHIKSYIDPDLFPCAPGQGALAIQCR-TNDLDQEWIKRLHHVETHLQISAERGALVALE 243
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRF 298
SC++A+ +A +G L + L +DG+ + A +G Q IR
Sbjct: 244 ASCRTAVGAYAKIEGDALTLFVEALTADGRTRWQRRETIIAPTLETAHALGLGLGQSIRD 303
Query: 299 ISNKNVFNF 307
+ + +
Sbjct: 304 EAGDRLIQY 312
>gi|253579011|ref|ZP_04856282.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39B_FAA]
gi|251849954|gb|EES77913.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39BFAA]
Length = 317
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 91/306 (29%), Positives = 149/306 (48%), Gaps = 11/306 (3%)
Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHK----IPPHNIVIIPLSTKGDRITNR 53
M +K IG+R S LA+ + +S + ++ + I+ + T GD I +R
Sbjct: 12 MRRKMMTEVIIGSRESKLAVLQSEMVKSYIEQKNREENAGSEITVNILTMKTTGDIILDR 71
Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113
TL ++GGKGLF +E+++ L+ G+ + +VHS KDMP ++ K L + A+ RED RDV +
Sbjct: 72 TLDKVGGKGLFVKELDRALLDGKSNLSVHSLKDMPMEVPKELPLLAFSKREDPRDVLVLP 131
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
+ D +G SSLRR L + ++ V RG ++TRL KL+ + ++LA
Sbjct: 132 EGVAELDPD--KPLGCSSLRRTLQLKKLYPEMEVKSIRGNLQTRLRKLDEGEYSGLILAA 189
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+KRL E I ++ PS GQG + ++ + D W + E
Sbjct: 190 AGLKRLGLENRISRYFTPDEMIPSAGQGILAVQGRKGEDYGY--LDGYCDRDAWLAGTAE 247
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
RA++ LDG C S +A FA G ++ G+ + + G D +G A
Sbjct: 248 RAYVKYLDGGCSSPVAAFAEVDGDEIFIRGLYYSEATGKWLTGQIRGAAEDGEKLGIALA 307
Query: 294 QYIRFI 299
+ ++
Sbjct: 308 KQLKSD 313
>gi|121711982|ref|XP_001273606.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL
1]
gi|119401758|gb|EAW12180.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL
1]
Length = 333
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 150/314 (47%), Gaps = 15/314 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R +L + P + I+ L T GDR + L G K L+
Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDNLQKLS--PDRSFEIVTLHTLGDRDKSTALYSFGAKNLW 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL SGE+D VH KDMPT L ++A PR+D RD I +L+ L
Sbjct: 69 TAELEEKLNSGELDVVVHCLKDMPTTLPDTCDLAAIPPRDDPRDALIIKSSLPYTTLQSL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
+++GTSS+RR A L R + + RG +ETRL K++ + + ++++ AG++RL
Sbjct: 129 PAGAIVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDGEYTCMVMSAAGLERL 188
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + L D + GQGA+ +E + EL+ + E + + ERA +
Sbjct: 189 GLQHRISQYLGSRDGGILHAVGQGALGLEIRKGDSATLELLDRLGDEGSTLACLAERALM 248
Query: 238 AELDGSCKSAIAGFAYCKG---STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291
L+G C I L IV++ DG S ++ +AI +G +
Sbjct: 249 RALEGGCSVPIGVETEWVDWAARLLAMRAIVVSLDGTRSVLDSVEVRVQSKEEAIALGEE 308
Query: 292 AAQYIRFISNKNVF 305
A + +
Sbjct: 309 LAARLVKAGADGIL 322
>gi|238926756|ref|ZP_04658516.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531]
gi|238885288|gb|EEQ48926.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531]
Length = 289
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 95/283 (33%), Positives = 151/283 (53%), Gaps = 3/283 (1%)
Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83
++ H P + + L+TKGDRI + L +IGGKGLFT+E+E+ ++ +D AVHS
Sbjct: 2 AEAIKKEH--PSCCVELHELTTKGDRILDAPLAKIGGKGLFTKELEQAMLDDAVDLAVHS 59
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KDMPT++ GL I A R D D F+S +++DL + + +GTSSLRR+A LL R
Sbjct: 60 LKDMPTEVPDGLVIGAITTRLDPGDAFVSAHYAAVEDLPVGARVGTSSLRRRAQLLAVRP 119
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
D+++ D RG + TRL KL+ + AI+LA AG+KRL E+ I+ IL P+ GQGA+
Sbjct: 120 DLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLGFERRIRTILPRSVMLPAVGQGAL 179
Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFY 262
IE + ++ + + ERAFL ++G C+ + +A +
Sbjct: 180 AIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRVEGGCQIPVGVYAEVDANGQISID 239
Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
++ + DG+ +G A +G A+ + + +
Sbjct: 240 AMIASVDGQRICRSDAHGAGEQAEALGTALAEELLDAGGREIL 282
>gi|297201478|ref|ZP_06918875.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
gi|197716811|gb|EDY60845.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
Length = 319
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 157/317 (49%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K R+GTR S LALA + ++ V P + ++ ++T GD ++ L +IGG
Sbjct: 1 MSTKALRLGTRRSKLALAQSGRVAEAVSQVTGRP---VELVEITTYGD-VSKEALAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A D
Sbjct: 57 TGVFVTALREALLKGEVDFAVHSLKDLPTGQPDELVLAALPEREDPRDVIVARDALKFTD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L + DI + RG I+TR+ + + + A++LA AG+
Sbjct: 117 LPPGARIGTGSPRRTAQLNAYARAHGLDIETVAIRGNIDTRMRFVRDGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+R+ + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+
Sbjct: 177 QRIGRIDEVTDFLSVDTVLPAPGQGALAIECTADNADLIAALGELDDPFTRVAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A + G+V +DG ++S G A+
Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSRMVQLSTTGPVPETYDQAMA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+GR+ A + +
Sbjct: 297 LGRELAAEMLAQGAAGL 313
>gi|83720099|ref|YP_441428.1| porphobilinogen deaminase [Burkholderia thailandensis E264]
gi|257139896|ref|ZP_05588158.1| porphobilinogen deaminase [Burkholderia thailandensis E264]
gi|123740194|sp|Q2T071|HEM3_BURTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83653924|gb|ABC37987.1| porphobilinogen deaminase, putative [Burkholderia thailandensis
E264]
Length = 329
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC
Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG SR DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGARVLAARAQSRAATAADALALGRAVSDELERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|57242140|ref|ZP_00370080.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195]
gi|57017332|gb|EAL54113.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195]
Length = 308
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 96/305 (31%), Positives = 147/305 (48%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR SPLAL + L H + + STKGD + + L +IGGKG
Sbjct: 1 MKKLIIATRKSPLALWQSEFVADILRKTH---GIEVHLEGFSTKGDILLDSPLAKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L
Sbjct: 58 LFTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180
++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + AI+LA AG+KRL
Sbjct: 118 QNAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKGGEFDAIILASAGVKRLGLE 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + ++ P+ QG + I++ N + L++ +N E + ER F+ L
Sbjct: 178 SEVKFIYRFSKDELVPAATQGILGIQSPDKN-EILTLLQCLNDEKSLIESTVERDFIRTL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A G + I+ DG R + + G A
Sbjct: 237 EGGCQVPIGINAELMGEQITVRSILGLPDGSEILRDKRIILKKNYQGFGERLALEFIKRG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELL 301
>gi|54027143|ref|YP_121385.1| porphobilinogen deaminase [Nocardia farcinica IFM 10152]
gi|61213309|sp|Q5YP70|HEM3_NOCFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54018651|dbj|BAD60021.1| putative porphobilinogen deaminase [Nocardia farcinica IFM 10152]
Length = 346
Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 147/310 (47%), Gaps = 15/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R +L+ ++ + T GD ++ + +IG G+F
Sbjct: 9 PLRIGTRGSLLAMTQAGTVRDALIAA----GRPAELVVVKTPGDMSSD-PVQKIG-VGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + +L +G ID AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 63 TSALRDELAAGTIDLAVHSYKDLPTAPDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 122
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR A L + ++ RG +++RL ++ + + A+++A AG+ R+ + V
Sbjct: 123 AKVGTSAPRRVAQLRALGLGLDIVPLRGNLDSRLARVTDGELDAVVVARAGLSRIGRTAV 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L P+P QGA+ +E + E + ++ T +V ERA LAEL+ C
Sbjct: 183 ITEALEPVQMLPAPAQGALAVECRSEDAALIEALAELDDAATRAAVVAERALLAELEAGC 242
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A L G A DG S G+ A +GR A+
Sbjct: 243 TAPVGALAEVVESLDDDGRIVEELSLRGCAAAVDGSEVLRASVVGDPERAAELGRALARE 302
Query: 296 IRFISNKNVF 305
+ + + +
Sbjct: 303 LLELGARELL 312
>gi|328768210|gb|EGF78257.1| hypothetical protein BATDEDRAFT_17445 [Batrachochytrium
dendrobatidis JAM81]
Length = 342
Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 107/324 (33%), Positives = 154/324 (47%), Gaps = 21/324 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LA+ ++ L + P I ++T GD++ + L++IG K
Sbjct: 16 SKTNFTIGTRESQLAMIQTTHVQALLKQQY--PQLTFDINGMTTTGDQVQDVALSKIGTK 73
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
LFT+E+E L +D VHS KD+PT+L G+ + A L RE DV I H+ L
Sbjct: 74 SLFTKELEMALDDHSVDFVVHSLKDLPTQLPSGMMVGAILEREQPNDVVIMSLKHSFTGL 133
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
L S+IGTSS+RR A L R ++ D RG + TRL KL++ + AILLAYAGI
Sbjct: 134 AQLPAGSIIGTSSVRRSAQLKRRFPNLVFQDIRGNLNTRLKKLDDPASPFAAILLAYAGI 193
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I EIL + GQGAI IE N+ + L+ +NH T ER+F
Sbjct: 194 HRMGWTDRITEILPTVTILHAVGQGAIGIECRENDTCVRSLLAPLNHTPTRIRCTAERSF 253
Query: 237 LAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRCD------- 284
+ L+G C + + + L G V + DG I + + +
Sbjct: 254 MRSLEGGCSVPLGVSTSIEPNDTGIDVLCLTGSVTSLDGSIELRHAMSMDLDSEDIEEKV 313
Query: 285 --AINIGRDAAQYIRFISNKNVFN 306
A +G A + K+V +
Sbjct: 314 TMAHKLGTALANVLIERGAKDVLD 337
>gi|254418576|ref|ZP_05032300.1| porphobilinogen deaminase [Brevundimonas sp. BAL3]
gi|196184753|gb|EDX79729.1| porphobilinogen deaminase [Brevundimonas sp. BAL3]
Length = 317
Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 8/306 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV----IIPLSTKGDRITNRTLTEIGG 60
P RIGTR S LALA + + ++ + I ++ + T GDRI +R L E+GG
Sbjct: 4 PLRIGTRRSKLALAQSGMMQRAIGRALGVAEAEIEAAVPLVEIVTTGDRIQDRRLMEMGG 63
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LFT+EIE+ L+ ID A+HS KD+P + +GL I+A RED RD FIS S
Sbjct: 64 KALFTKEIEEALLDRRIDIAIHSMKDVPAEQPEGLCIAAIPEREDARDAFISRDFDSFDQ 123
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR+A L R D+ V RG I+TRL + AILLA +G+ RL
Sbjct: 124 LPFGARLGTASLRRQAQALALRPDLKVEMLRGNIDTRLRRAAEGDFDAILLAVSGMTRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I+E L+++ F P+PGQGA+ I+T + V +NH +T +V ER + L
Sbjct: 184 VTEHIREKLSLDAFLPAPGQGALAIQTR-ADDIDAPWVAALNHPETAVAVAAERGAMTAL 242
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIR 297
+GSC++A+ +A +G TL +L+ DG DA +G +
Sbjct: 243 EGSCRTAVGAYALIEGDTLRLTTEMLSPDGSARWRRVGELFQPTEADARALGERLGGEVH 302
Query: 298 FISNKN 303
+
Sbjct: 303 AFAGDQ 308
>gi|70997451|ref|XP_753473.1| hydroxymethylbilane synthase [Aspergillus fumigatus Af293]
gi|66851109|gb|EAL91435.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus
Af293]
gi|159126797|gb|EDP51913.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus
A1163]
Length = 341
Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 151/319 (47%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ F IGTR S LAL ++L P + I T GD+ T L E K
Sbjct: 15 SRRTFTIGTRKSKLALLQTDLVVAALKK--SWPEYTFQIHSQETAGDKNTVIALREFTTK 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + S
Sbjct: 73 NLWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMSF 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
++ SV+GTSS+RR A L R + V D RG I TRL KL+ I+LA AG+
Sbjct: 133 SEMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIVLAAAGL 192
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL E I + L+ ++ + GQGA+ +E ++ ++++ I H+ T + ER
Sbjct: 193 LRLGMEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKVLRDMLNSIGHQKTTLACLAER 252
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
+ L L+G C + + L IV++ DG+ EV +G+ A
Sbjct: 253 SLLRTLEGGCSAPLGVETEWVQDSDRSSKLRMRAIVVSVDGRESAEVEVDGSVDTAESAE 312
Query: 287 NIGRDAAQYIRFISNKNVF 305
G A+ + +
Sbjct: 313 EFGVTVAKALVEKGAGEIL 331
>gi|91789512|ref|YP_550464.1| porphobilinogen deaminase [Polaromonas sp. JS666]
gi|91698737|gb|ABE45566.1| porphobilinogen deaminase [Polaromonas sp. JS666]
Length = 334
Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 19/314 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ I TR S LAL A ++ L + ++ ++T+GD+I +R+L+++GGKGL
Sbjct: 14 RKIIIATRESRLALWQAEHVKALLESRLGW---QVELLGMTTQGDQILDRSLSKVGGKGL 70
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E L G D AVHS KD+P L G ++ L RED D F+S+ SL DL
Sbjct: 71 FVKELEVALSEGRADLAVHSLKDVPMDLPDGFALACVLEREDPHDAFVSNQFASLADLPQ 130
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+V+GTSSLRR LL R D+++ RG ++TRL KL+ HAI+LA AG+KRL +
Sbjct: 131 GAVVGTSSLRRLVLLKALRPDLNIEPLRGNLDTRLRKLDEGHYHAIVLAAAGLKRLGLQA 190
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ I +D P+ GQGA+ IE + + + + H+ TW +V ER + GS
Sbjct: 191 RIRGIFAPDDMLPAAGQGALGIEVRADRHDLMQALGTLAHQPTWLAVTAERTVSRAMGGS 250
Query: 244 CKSAIAGFAY---CKGST-LYFYGIVLA------SDGK---IFHEVSRNG---NRCDAIN 287
C +A + +GS + + G+ V + + +A
Sbjct: 251 CSMPLAAYTEGPAAEGSEGMQLHATWGDPATADAPAGQPLAPLVRVQKTAVVRSFAEAEA 310
Query: 288 IGRDAAQYIRFISN 301
+G A +R
Sbjct: 311 LGEAVAAQLRAGGA 324
>gi|305665660|ref|YP_003861947.1| porphobilinogen deaminase [Maribacter sp. HTCC2170]
gi|88710417|gb|EAR02649.1| porphobilinogen deaminase [Maribacter sp. HTCC2170]
Length = 529
Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats.
Identities = 101/311 (32%), Positives = 152/311 (48%), Gaps = 13/311 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A ++ L + H ++P+ + GD + ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSELALWQANAVKNQLEAL----GHQTTLVPVKSTGDIVLDKPLYELGV 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G+ID AVHS KD+PT L KG+ +A L R + D+ + +
Sbjct: 56 TGIFTKTLDVAMLNGDIDIAVHSMKDVPTALPKGIVQAAVLKRANYLDILAYNDNEEFL- 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
++I T SLRRKA L +V+D RG I +R+ KLN+N + + A AG+ R+
Sbjct: 115 GGRDAIIATGSLRRKAQWLNRYPTHTVVDLRGNINSRMQKLNDNDWNGAIFAAAGLDRIG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + + P+P QGAI + N+ E +NHE T ER FL L
Sbjct: 175 LEHEN--TIGLTWMVPAPAQGAIMVVALENDEYVLEACAQMNHEATEICTGLEREFLRIL 232
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+G C + I AY K + G++L+ DGK E N+ RD A I
Sbjct: 233 EGGCTAPIGALAYINKEEEVKLKGVLLSLDGKKRLEAEFAEPLGKHQNMARDCANSILAR 292
Query: 300 SNK----NVFN 306
K + N
Sbjct: 293 GGKRLMGEILN 303
>gi|302556915|ref|ZP_07309257.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
gi|302474533|gb|EFL37626.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
Length = 311
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L P ++P+ T GD+ L+ + GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAELAAAR--PGVRTEVVPVKTTGDKWLG-DLSAVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++G D AVH KD+P L G +A+L R+D+RD + +L +LA
Sbjct: 64 KEVDAALLAGRADVAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELAP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L ++ + RG R+ KL +A A+LLA +G++R+ +
Sbjct: 124 GTRIGTSSVRRVAQLAVSHPHLTCVPLRGNANLRMEKLAAGEADALLLAVSGLERIGRAD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L+ E P G G + ++ + E V + H DT ER FL L G
Sbjct: 184 VISEVLSPEAMMPPIGAGILALQCREGDTALIEAVSALGHPDTHREATAERMFLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A L V +DGK R D +G A + +
Sbjct: 244 CNSPIAGYAQVDLSGELSLRACVFTADGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 EIID 307
>gi|227545398|ref|ZP_03975447.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A]
gi|300908522|ref|ZP_07125985.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112]
gi|112944692|gb|ABI26362.1| porphobilinogen deaminase [Lactobacillus reuteri]
gi|227184680|gb|EEI64751.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A]
gi|300893929|gb|EFK87287.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112]
Length = 305
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 154/308 (50%), Gaps = 7/308 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K +G+R S LA+A +SL ++ P I + T+GDR +L +IGG
Sbjct: 1 MTDKVI-VGSRKSKLAMAQTKLVIASLKEL--FPTTQFEIKNVITEGDRNQQASLAKIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F +EIE++L + ID AVHS KD+ L L + A+ R D +S + D
Sbjct: 58 KGVFVKEIEEELKNCTIDFAVHSLKDVMPVLPDELTLGAFPKRVSPFDCLVSRQEFTSLD 117
Query: 121 L-ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ IGT+SLRR+ LL R D+ +I RG I+TRL K++ ++LA AG+ RL
Sbjct: 118 ALPHGARIGTNSLRRQGQLLNVRPDLKIIPIRGNIDTRLKKIDTENLAGVVLAEAGLDRL 177
Query: 180 KKEKVIKEILNI-EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ L++ + P+ GQG + IE + + ++++ IN + ++ ER F+
Sbjct: 178 SIDLSSYHQLSLKDIIVPAVGQGCLAIECRKADERVRKMLDQINDPQSAKCIHIEREFMR 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
EL GSC I G AY + + F G++ + +G+ + + +G+ A +
Sbjct: 238 ELGGSCNFPIGGHAYLQDQQIVFDGLIASPNGEHLIKEVAV--PANKPGVGKVVADQLLA 295
Query: 299 ISNKNVFN 306
N +
Sbjct: 296 KDNFGIIE 303
>gi|297192867|ref|ZP_06910265.1| porphobilinogen deaminase domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151527|gb|EFH31219.1| porphobilinogen deaminase domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
Length = 319
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + ++ + + ++ ++T GD ++ L +IGG
Sbjct: 1 MTERALRLGTRRSKLAMAQSGQVAEAVRRLS---GRAVELVEITTYGD-VSREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L GE+D AVHS KD+PT L ++A RED RDV I+ S +
Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELALAAVPKREDPRDVLIARDGLSFER 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L + + RG ++TR+ + N + A++LA AG+
Sbjct: 117 LPNGARIGTGSPRRMAQLNAYARTHGLTIETVPIRGNVDTRIGFVRNGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + L+++ P+PGQGA+ IE ++ + ++ T +V ER+
Sbjct: 177 NRIGRTDEVTDFLSVDFVLPAPGQGALAIECSASDADLVATLAGLDDPHTRVAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A G + G+V +DG ++S G DA
Sbjct: 237 LAALEAGCSAPVGALADLLGDGQEFTEMRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+GR+ A + +
Sbjct: 297 LGRELADEMLAKGAAGL 313
>gi|70999177|ref|XP_754310.1| porphobilinogen deaminase Hem3 [Aspergillus fumigatus Af293]
gi|66851947|gb|EAL92272.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus
Af293]
gi|159127327|gb|EDP52442.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus
A1163]
Length = 362
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 13/312 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ R L + P I L T GDR L + G K L+
Sbjct: 42 PLRIGTRRSNLAMVQTEGIRDRLQKIG--PDRTYEIEALRTAGDRDQLTALYDFGAKSLW 99
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL SGE+D VH KDMPT L +++A PR+D RD I SLK L
Sbjct: 100 TTELEEKLTSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIIKAGLPYTSLKSL 159
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL K++ +++ ++++ AG++R+
Sbjct: 160 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPHSEYMCMVMSAAGLERV 219
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + L D + GQGA+ +E + K QEL+ + + + ER+ +
Sbjct: 220 GLKHRISQYLGSRDGGILYAVGQGALGLEIRKGDRKMQELLGQLADRKSTLACLAERSLM 279
Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293
L+G C I L IV++ DG E +A +G + A
Sbjct: 280 RTLEGGCSVPIGVETEWMSSGDLRMDAIVVSLDGTRSVEDRITARVEAIDEADALGEELA 339
Query: 294 QYIRFISNKNVF 305
+ +
Sbjct: 340 GRLLEAGAGEIL 351
>gi|257063872|ref|YP_003143544.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476]
gi|256791525|gb|ACV22195.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476]
Length = 318
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 141/310 (45%), Gaps = 8/310 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ F IGTR S LAL ++M P + I +T GD L EIG
Sbjct: 1 MPER-FVIGTRGSKLALWQTETVGRAIMRA--FPEIEVEIRVRNTTGDINLASPLAEIGD 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119
KGLFT E+E L+ GE+D VHS KD+ T+ +G ++ LPR D RDV +
Sbjct: 58 KGLFTRELETDLLLGEVDMCVHSLKDLETEQPEGCVVAGVLPRADARDVLVCGPRIQAAS 117
Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
++ S IGT S RR A L ++ RG ++TR+ K + +LA AG+K
Sbjct: 118 LAEVPEGSRIGTGSRRRVAQLKANFPNMVPEGIRGNVDTRVAKAEGDDYEGAILAAAGMK 177
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I L IED P+PGQGAI +E N +A ++ + +N T + ER L
Sbjct: 178 RMGYEDHIAAYLPIEDMIPAPGQGAIAMEVLKKNERAYQIARALNDPVTKACTDAERFVL 237
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQY 295
L+G C + I + F VL+ G + D +++ +
Sbjct: 238 FSLEGGCSAPIGAHCRLEDGKYIFDACVLSLGGTKAARCHLEADADSADPMDMAWEVVSE 297
Query: 296 IRFISNKNVF 305
+ + +
Sbjct: 298 LIGEGARAIL 307
>gi|297564830|ref|YP_003683802.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
gi|296849279|gb|ADH62294.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
Length = 294
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 17/305 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IGTR S LALA L + P ++ NR+ G
Sbjct: 1 MRVIVIGTRGSLLALAQTRWVVERLKE--NWPEVEFRTKTIT-------NRSEDPAAG-- 49
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
++ L EID A+H+ +D+P GL ++A R D R+ F+ +A+ L+DL
Sbjct: 50 -----LQDALRKREIDIALHALRDLPPAQADGLHLTAVTRRVDPREAFVGRSAKRLEDLP 104
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+G SLRRKA LL +R D+ V + +G ++ +L L + AI++ + RL
Sbjct: 105 DGAVVGAPSLRRKAQLLAYRPDLVVRETKGDVDDQLEALGTGEYDAIIMPAGSLLRLDLR 164
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + ++ E P+PGQGA+ +E + + A+EL +NH + D V ERAF+A L
Sbjct: 165 NRIDQFVDPEILLPAPGQGALGLEVRLGDDYAEELAYSLNHRPSSDRVCAERAFVAALGV 224
Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
++ +A A+ + TL G V + DG+ G+ +A+ +G + AQ +
Sbjct: 225 GLEAPVAALAFVEDDGTLRLEGGVFSPDGREMIRGEIEGDASEAVELGSELAQDLLAEGG 284
Query: 302 KNVFN 306
K +
Sbjct: 285 KEILE 289
>gi|327400408|ref|YP_004341247.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6]
gi|327315916|gb|AEA46532.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6]
Length = 296
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 151/299 (50%), Gaps = 11/299 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LALA + + L + + I + T GD + +R L E G G F
Sbjct: 4 KIVVGTRGSKLALAQTEKVIAHLKA----EGYEVEIRIIKTPGDIMKDRPLHEFKGMGAF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
I++ L+ G+ID AVHS KD+P+K+ + A L RE D F++ ++ +L +
Sbjct: 60 VRVIDEALVDGDIDIAVHSYKDVPSKINGVIA--AVLERESPCDAFVTREGLTIDELESY 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183
SV+GTSSLRR+A + R+R D+ + + RG ++TRL KL + AILLA AG+ RL EK
Sbjct: 118 SVVGTSSLRRRAQIKRYRPDLKIENLRGNVDTRLRKLREKQYDAILLAEAGLIRLGLNEK 177
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + LN E F PS QG I +ET ++LV +NH+ T ERA L EL
Sbjct: 178 VRYQSLNPEIFVPSANQGIIAVET---RKGEEDLVSFMNHKRTAVEAEVERAVLKELGVG 234
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + +A + Y VL+ DG V + AI A+ ++
Sbjct: 235 CAVPVGIYAKF-DGKIRLYCEVLSHDGSRAVRVEETLSPKTAIEEAIIIARELKKECGG 292
>gi|169762720|ref|XP_001727260.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83770288|dbj|BAE60421.1| unnamed protein product [Aspergillus oryzae]
Length = 330
Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats.
Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 13/313 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R+ L + P + I L T GDR L G K L+
Sbjct: 10 PLRIGTRRSNLAMVQAEGIRNCLQKI--APDRSFEIEALRTLGDRDQLTALYNFGAKSLW 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL +GE+D VH KDMPT L +++A PR+D RD I SLK L
Sbjct: 68 TTELEEKLNAGELDVIVHCLKDMPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSLKSL 127
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL K++N+ + ++++ AG++R+
Sbjct: 128 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDNSDSEYTCMVMSAAGLERV 187
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
E I + L +D + GQGA+ +E + K QEL+ + + + + ER+ +
Sbjct: 188 GLEHRISQYLGSKDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQQSTLACLAERSLM 247
Query: 238 AELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAA 293
L+G C + I + L + IV++ DG E + N +A +G++ A
Sbjct: 248 RTLEGGCSAPIGVETEWISAGALSIHAIVVSLDGTKSVEDTIVSNVKTVEEATALGKELA 307
Query: 294 QYIRFISNKNVFN 306
+ + N
Sbjct: 308 ARLVKAGAGEILN 320
>gi|109947886|ref|YP_665114.1| porphobilinogen deaminase [Helicobacter acinonychis str. Sheeba]
gi|123066146|sp|Q17W61|HEM3_HELAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|109715107|emb|CAK00115.1| hemC [Helicobacter acinonychis str. Sheeba]
Length = 306
Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats.
Identities = 94/303 (31%), Positives = 151/303 (49%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + T GD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANYIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSTKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ +GT+SLRR L R D+ RG ++TRL KL + + AI+LA AG+ RL +
Sbjct: 120 AKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLESGEFDAIILAEAGLCRLNIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E ++ L + +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKSHKHFTAL-QKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ + A G + I+ +G+ + G++ A + ++ + +
Sbjct: 239 CQIPVGVHASLMGEKVKIQAILGLPNGEEVIAKEKQGDKNKAFDSVQELLEAFLQSGARE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|220928704|ref|YP_002505613.1| porphobilinogen deaminase [Clostridium cellulolyticum H10]
gi|254800245|sp|B8I0Q8|HEM3_CLOCE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219999032|gb|ACL75633.1| porphobilinogen deaminase [Clostridium cellulolyticum H10]
Length = 293
Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats.
Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 7/294 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKG
Sbjct: 1 MKKIRIGSRDSKLAIIQSEMVMAAIREF--DPDIELELITMKTTGDKILDKTLDKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++ L + E+D VHS KDMP + L + A RED RD F+ +
Sbjct: 59 LFVKELDYALYNNEVDITVHSYKDMPLEDNPKLPVVALSKREDPRDAFVLPQGEIA---E 115
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E
Sbjct: 116 NNEPIGSSSQRRQLQLKALFPNRKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLE 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++++ P+ QG I ++ + + +K+ + E++ ER F+ E++G
Sbjct: 176 SRISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISQAERTFVREMNG 233
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + IA +A S + G+ + +G+R + + +G + + +
Sbjct: 234 GCSTPIAAYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKM 287
>gi|150024157|ref|YP_001294983.1| hydroxymethylbilane synthase [Flavobacterium psychrophilum
JIP02/86]
gi|149770698|emb|CAL42162.1| Hydroxymethylbilane synthase [Flavobacterium psychrophilum
JIP02/86]
Length = 308
Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats.
Identities = 94/303 (31%), Positives = 157/303 (51%), Gaps = 10/303 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK +IGTR S LAL A L D+ H II + ++GD I ++ L E+G
Sbjct: 1 MAKKTIKIGTRDSELALWQAHHVEKMLNDL----GHKTKIIAVKSQGDIILDKPLYELGI 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G+ID AVHS KD+PT L +G+ +A L R + +D+ + + +
Sbjct: 57 TGIFTKTLDIAMVNGDIDIAVHSMKDVPTALPQGIVQAAVLERANEKDILVYNNNLDFLN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ I T SLRR+A L + V+D RG + TR+ KL +N + + A AG++R+
Sbjct: 117 TQ--ATIATGSLRRQAQWLHKYPNHKVVDLRGNVNTRMQKLQDNNWNGAVFAAAGLERIN 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +N++ P+P QGA+ + N+ + + +NH +T + ER FL L
Sbjct: 175 IKPEN--YINLDWMIPAPAQGAMMVVAMGNDTYCLDALAELNHIETEITTYIERQFLRTL 232
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C + I +A K T++F G++ + DG E+ + + +G A Q I
Sbjct: 233 EGGCTAPIGAYARFNEKDETIHFQGVLFSLDGSQKIEIKKIVEIQEWKQLGYHAGQEIFE 292
Query: 299 ISN 301
Sbjct: 293 NGG 295
>gi|330993440|ref|ZP_08317375.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1]
gi|329759470|gb|EGG75979.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1]
Length = 360
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 163/316 (51%), Gaps = 15/316 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62
P ++GTR SPLAL + L + +ST GD++ NR L EIGGKG
Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQISTTGDQVQNRKLAEIGGKG 100
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
LF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I D
Sbjct: 101 LFAKEIHEALLDGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDVLILGPGCGEPDPA 160
Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+++G +S+RR+A +L R D+ RG ++TRL+KL + A LLAYAG
Sbjct: 161 DPYSVLPQGALVGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAARQCDATLLAYAG 220
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
++RL E IL+ P+ GQG + + ++ + +EL+ I + ERA
Sbjct: 221 LRRLGMEDRADVILDPTIMVPAAGQGIVGVTVRESDVELRELLSAIEDYEARAVATAERA 280
Query: 236 FLAELDGSCKSAIAGFAY----CKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LAELDGSC++ I G+A G L+ G+V DG + S +G DA +G
Sbjct: 281 LLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPADAARLG 340
Query: 290 RDAAQYIRFISNKNVF 305
RD + +R S ++F
Sbjct: 341 RDLGRSLRADSPADIF 356
>gi|91218004|ref|ZP_01254956.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755]
gi|91183862|gb|EAS70253.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755]
Length = 302
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 10/304 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K IGTR S LA+ A + ++ L + ++ ++ P+ + GD ++ L E+G
Sbjct: 1 MS-KTISIGTRDSELAMWQAHKVKTLLENQ----GYSTILKPVKSTGDLNLDQPLYEMGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ L+ GEID AVHS KD+PT L KG+ A LPR + D+ + L
Sbjct: 56 TGIFTKTLDVALVKGEIDIAVHSMKDVPTALPKGVVQGAVLPRANTSDILLHKGLSFL-- 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRRKA LR V + RG + TRL KL N+ + + A AG++R+
Sbjct: 114 -ENKGTIATGSLRRKAQWLRKYPQHKVENLRGNVNTRLQKLQNHDWNGAIFAAAGLERIN 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ P+P QGA+ + T +N ++ ++ +NH DT +V ER FL L
Sbjct: 173 L--KPDNHIELDWMIPAPAQGAMLVVTMEHNTVCRKALEKLNHTDTALAVRVEREFLKTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A K + F + + DGK + + D G+ A+++
Sbjct: 231 EGGCTAPIGALATIKDREINFRAGLFSLDGKQTFTIHEVISIDDVEGFGKRCAEHVLKQG 290
Query: 301 NKNV 304
+
Sbjct: 291 GGKL 294
>gi|50557014|ref|XP_505915.1| YALI0F26609p [Yarrowia lipolytica]
gi|55976378|sp|Q6C097|HEM3_YARLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49651785|emb|CAG78727.1| YALI0F26609p [Yarrowia lipolytica]
Length = 338
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 154/315 (48%), Gaps = 15/315 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G R S LAL + L VH P ++ ++ L+T GD++ ++ L GK L+
Sbjct: 18 KVFVGGRKSKLALVQTQHVAAMLKKVH--PDYSFPVLGLTTLGDQVQSKPLYSFDGKALW 75
Query: 65 TEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQ 116
T+E+E L+ + D VHS KDMPT L G ++ A L RED RD + +
Sbjct: 76 TKELETLLLEKVPGFDQQDIIVHSLKDMPTVLPDGCELGAILTREDPRDALVMAAGSPYK 135
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174
+L DL SV+GTSS+RR A L + + RG + TRL+KL++ ++LA A
Sbjct: 136 TLADLPAGSVVGTSSIRRSAQLKKSYPGLVYESVRGNVGTRLSKLDDPETPYKCLILAAA 195
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+KRL I L D + GQGA+ +E + K +++++ I +++ ER
Sbjct: 196 GLKRLDLGDRITGYLQKPDMLHAVGQGALGLEIRQGDEKTKKILEAIYDKESTLCCLAER 255
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRD 291
A + L+G C I + L IV++ +G F E ++ +A +G+D
Sbjct: 256 AVMRTLEGGCSVPIGVETKYENGKLTLDAIVVSVEGTEFVECTQVRAVEENWEAEQLGKD 315
Query: 292 AAQYIRFISNKNVFN 306
A+ + K + +
Sbjct: 316 VAEQLVKDGAKKILD 330
>gi|326388534|ref|ZP_08210128.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM
19370]
gi|326206999|gb|EGD57822.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM
19370]
Length = 309
Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats.
Identities = 111/281 (39%), Positives = 154/281 (54%), Gaps = 4/281 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLA+A A ETR+ L H P + ++P+ GDRI +R L EIGGK L+T
Sbjct: 1 MRLGTRQSPLAMAQAEETRARLCAAHGWPVDAVELVPVVASGDRIQDRPLAEIGGKALWT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ L G ID AVHS KD+ T + L I+A LPR D+RDV + A S+ D+ +
Sbjct: 61 KELDAWLAEGTIDAAVHSMKDVETLRPETLTIAAVLPRADVRDVLV--GAASVADIPTGA 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL + +
Sbjct: 119 RVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLGKLERGEADVTLLAAAGLVRLGETGIG 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ E + P+P QGAI IE L I+ T ++ ERA L L G+C
Sbjct: 179 T-PLDAETWLPAPAQGAIGIECLAARADLLSLFAAIDDAPTHAAIRAERALLTGLGGTCH 237
Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDA 285
S IA +G T L+ + + DG E S +
Sbjct: 238 SPIAVLTRPEGDTELFLRAALFSPDGAHRVEASATFPMTEP 278
>gi|253582657|ref|ZP_04859878.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium
varium ATCC 27725]
gi|251835527|gb|EES64067.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium
varium ATCC 27725]
Length = 306
Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIG 59
K+ IGTR S LA+A + + L + P I + T GD N ++
Sbjct: 8 MKRKIVIGTRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKS 65
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV IS + ++L
Sbjct: 66 LKSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLISKSGKTLM 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +VIGTSSLRR L RSD+ + RG I TRLNKL AILLA AG+KR+
Sbjct: 126 ELPKGAVIGTSSLRRTMNLKNLRSDLKIKQLRGNIHTRLNKLKTENYDAILLAAAGLKRV 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I E L+ E F P+P QG + I+ N+ + +E++K I+++D V ER F
Sbjct: 186 GLENEITEYLDPEKFLPAPAQGVLHIQCRENDEEIKEILKSIHNKDMEKIVVIEREFSKI 245
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + G + G+ G+ + S + I I + A I+
Sbjct: 246 FDGGCHTPMGCHCILNGDKITLTGVYF--KGETGYSASITEDAALGIKIAQKLADIIKEK 303
Query: 300 SNK 302
N
Sbjct: 304 IND 306
>gi|255949632|ref|XP_002565583.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592600|emb|CAP98957.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 330
Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 13/312 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R SL + P + I L T GDR L + G K L+
Sbjct: 10 PLRIGTRRSNLAVVQAEGIRDSLKRI--APERSYEIETLRTLGDRDQLTALYDFGAKSLW 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL+SGE+D VH KDMPT L +++A PR+D RD I S+K+L
Sbjct: 68 TTELEEKLVSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIVKSSLPYTSIKEL 127
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL KL+N ++ ++++ AG++R+
Sbjct: 128 PKGAVVGTSSVRRSAQLRRLYPYLRFANIRGNVETRLAKLDNPASEYTCMVMSAAGLERV 187
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
++ I + L +D + GQGA+ +E + K QEL+ + + + ER+ +
Sbjct: 188 GRKFRINQYLCSKDGGIFHAVGQGALGLEIRKGDTKTQELLDQLADRKSTLACLAERSLM 247
Query: 238 AELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293
L+G C I + + L +V++ DG E S +A +G+ A
Sbjct: 248 RTLEGGCSVPIGVETEWIRSDVLKITALVVSLDGSESVEDSLEARVQTVDEATELGKKIA 307
Query: 294 QYIRFISNKNVF 305
+ + +
Sbjct: 308 ARLVKAGAEAIL 319
>gi|317123819|ref|YP_004097931.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043]
gi|315587907|gb|ADU47204.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043]
Length = 316
Score = 215 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 152/303 (50%), Gaps = 9/303 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA + L H++ ++ ++T+GD ++ LT IGG G+F
Sbjct: 4 LRLGTRRSALATTQSGWVADQLRAA----GHDVELVEITTEGD-VSGGLLTAIGGTGVFA 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
I K L G +D AVHS KD+PT GL ++A RED RDV ++ +L +L + S
Sbjct: 59 AAIRKALTDGRVDVAVHSLKDLPTAPEPGLVVAAVPAREDSRDVLVARDGLTLGELPIGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GT S RR A L + + RG ++TRL +++ + A++LA AG+ RL + V+
Sbjct: 119 VVGTGSPRRTAQLAALGLGLEIRPIRGNVDTRLRLVSSGEVDAVILARAGLARLGRLDVV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ P+PGQGA+ +E + P E V V+ DT S+ ERA LA L+ C
Sbjct: 179 TEVLDPIQVLPAPGQGALAVECRADRPDVLEAVSVLEDADTRASITAERALLAALEAGCT 238
Query: 246 SAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ + A L DG+I S G D ++GR AQ +
Sbjct: 239 APVGALAEVVDGEEGLELSLRAFAGTEDGRIDLRRSLTGRYDDPESLGRRLAQILLEDGA 298
Query: 302 KNV 304
++
Sbjct: 299 ADL 301
>gi|29827579|ref|NP_822213.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680]
gi|39931490|sp|Q82P95|HEM32_STRAW RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName:
Full=Hydroxymethylbilane synthase 2; Short=HMBS 2;
AltName: Full=Pre-uroporphyrinogen synthase 2
gi|29604679|dbj|BAC68748.1| putative porphobilinogen deaminase [Streptomyces avermitilis
MA-4680]
Length = 314
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++ + T GD+ L+++ GKG FT
Sbjct: 10 IRIVSRDSPMALAQVARVRAELAALH--PRTRTEVVAVKTTGDKWMG-DLSKVDGKGAFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L
Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTMFAAFLKRDDIRDALVHPGGLTLDELPP 126
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +E
Sbjct: 127 GTRIGTSSVRRVAQLAAAYPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRED 186
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI E+L E P G G + ++ + E + + T ER FL L G
Sbjct: 187 VITEVLEPETMMPPIGAGILALQCREGDTGLIETISELGDPGTHREATAERMFLHVLQGH 246
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V DGK R D +G A + +
Sbjct: 247 CNSPIAGYARTERNGELSLRASVFTLDGKTVLNAHEWAGRLDPATLGTSVAVALLRQGAR 306
Query: 303 NVFN 306
+ +
Sbjct: 307 ELID 310
>gi|157825828|ref|YP_001493548.1| porphobilinogen deaminase [Rickettsia akari str. Hartford]
gi|166217781|sp|A8GNR5|HEM3_RICAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157799786|gb|ABV75040.1| porphobilinogen deaminase [Rickettsia akari str. Hartford]
Length = 301
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 109/298 (36%), Positives = 158/298 (53%), Gaps = 4/298 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLAL + P N I+P+ T GD I N+ L +IGGK L
Sbjct: 3 NSIRIGTRNSPLALIQTNLVIQQIKQF--FPDINCAIVPIITSGDLIQNKPLYDIGGKAL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ +ID AVHS KD+P ++ + L ISA L RED RDVF+ +S+K+L
Sbjct: 61 FLKEIEQALLDKKIDLAVHSLKDVPGRIPEELVISAVLEREDPRDVFVCLNYKSIKELPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
HSVIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAYAG+KRL
Sbjct: 121 HSVIGSSAVRRKAFIQKIRPDLKVTIFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFN 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
++ P GQG I +E N+ E+ INH T + + ERAFL LD
Sbjct: 181 PEYCHLIEYSHMLPCVGQGVIAVEIRQNDNSMLEICNQINHLPTCELIKPERAFLEYLDA 240
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+C++ I ++ Y + ++ D + N + G AA+ +
Sbjct: 241 NCRTPIGTYSQYLDADNIQTDFMLGNPDCSKITFHTEITNIKTSKEGGIKAAKMMLNQ 298
>gi|145220672|ref|YP_001131350.1| porphobilinogen deaminase [Mycobacterium gilvum PYR-GCK]
gi|315442377|ref|YP_004075256.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1]
gi|189028094|sp|A4T340|HEM3_MYCGI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145213158|gb|ABP42562.1| hydroxymethylbilane synthase [Mycobacterium gilvum PYR-GCK]
gi|315260680|gb|ADT97421.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1]
Length = 312
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 14/310 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +IG G+FT
Sbjct: 2 IRIGTRGSLLATTQAGTIRDALIAA----GHDAELVIISTEGDRRADEPIADIG-VGVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +D AVHS KD+PT + I+A RED RD ++ L +L S
Sbjct: 57 AALREAIADNVVDAAVHSYKDLPTAVDPRFMIAATPVREDARDALVARDGMVLGELPAGS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +V+
Sbjct: 117 VIGTSSPRRVAQLKALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVAKAGLSRIGRLEVV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + +L+ ++ DT +V ER LAEL+ C
Sbjct: 177 TETLEPVQMLPAPAQGALAIECRAGDTALAQLLAELDDADTRAAVTAERTLLAELEAGCS 236
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V DG S G+ A +G A +
Sbjct: 237 APVGAIAEVVESIDEDGRVFEELSLRGCVATLDGSDVIRASGIGSPDRARELGLSVAAEL 296
Query: 297 RFISNKNVFN 306
+ +++ +
Sbjct: 297 FDLGARDLLD 306
>gi|269119644|ref|YP_003307821.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386]
gi|268613522|gb|ACZ07890.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386]
Length = 297
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 153/301 (50%), Gaps = 5/301 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGK 61
+ +GTR S LA+A A + L++ KIP + I + T GDR + K
Sbjct: 1 MRKIVMGTRGSVLAVAQAETVKKMLIE--KIPGLTVEIKKIVTSGDRDQTTNWGGDSSLK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
+F +EIE++L+ G ID AVHS KDMP +GL + + RED RDV +S ++
Sbjct: 59 SMFVKEIERELLEGTIDFAVHSMKDMPQISPEGLINACFPIREDNRDVLVSKNNTVFSEM 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SVIGTSSLRRK+ + ++ + RG I TRL KL++ + I+LA AG+ R
Sbjct: 119 PSGSVIGTSSLRRKSAVTELYPEMEIKPIRGNIHTRLGKLDSGEYDGIILAAAGLIRTGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E I E ++ E PP+P QG +C++ NN + E++K I+ +T ER F D
Sbjct: 179 ESRISEYIDPEKMPPAPAQGILCVQCRENNMEILEILKEIDDRETRIICEAEREFSRIFD 238
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + + FA K ++ G+ + G+ + G+ + A+ IR N
Sbjct: 239 GGCHTPMGCFAVIKEEEIFLKGMFCS--GEKMYFGEAGGSIEKPKEAAQKLAEIIRRQIN 296
Query: 302 K 302
+
Sbjct: 297 E 297
>gi|229490699|ref|ZP_04384537.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121]
gi|229322519|gb|EEN88302.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121]
Length = 324
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 92/311 (29%), Positives = 145/311 (46%), Gaps = 15/311 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ + TKGD+ T+ + +IG G+F
Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIIKTKGDQSTD-PVQKIG-VGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 65 TAELREALVDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E + P+P QGA+ +E N + ++ + T +V ERA LA L+ C
Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSANAELAAILAEHDDAGTRAAVTAERALLAGLEAGC 244
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A L G A DG G A +GR A+
Sbjct: 245 TAPVGAIAEIVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGAPDKAEELGRAVARE 304
Query: 296 IRFISNKNVFN 306
+ + + + N
Sbjct: 305 LLELGARELMN 315
>gi|215272308|ref|NP_001135813.1| hydroxymethylbilane synthase [Nasonia vitripennis]
Length = 356
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 163/342 (47%), Gaps = 41/342 (11%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+ FR+G+R S LAL L D++ P I+ +STKGD+I N +L +IG K
Sbjct: 5 EQNVFRVGSRKSELALIQTEYVIKCLKDLN--PDKEFKIVTMSTKGDKILNISLPKIGEK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFTEE+E L + +D VHS KD+PT L +GL + A L RED RD + A S L
Sbjct: 63 SLFTEELENALENNRVDFLVHSLKDLPTTLREGLALGAILEREDPRDAVVMSKAFSAFTL 122
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
SVIGTSSLRR A L R + V + RG + TR KL++ AI+LA AG+
Sbjct: 123 DTLPPGSVIGTSSLRRSAYLARNMPHLKVENIRGNLNTRFKKLDDEKGAYAAIILAVAGL 182
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KR+ E I + L+ E+ GQGA+ +E +P+ L++ +NH T ER+F
Sbjct: 183 KRMGLENRISQYLDSEETLYCVGQGALAVECREVDPRVLSLLEPLNHFHTTLRCVAERSF 242
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR----CD-------- 284
L L G C + + + + L G VL+ +GK+ + + D
Sbjct: 243 LKYLGGGCSAPVGVSSTLENKELKITGAVLSLNGKVLIKDTLKCKLYMPSDDGEPPKKCP 302
Query: 285 ----------------------AINIGRDAAQYIRFISNKNV 304
A +G+D A+ + + V
Sbjct: 303 YREPRTYCGTVPGNMNAISLFGAEQLGKDIAESLIKQNALEV 344
>gi|302381524|ref|YP_003817347.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264]
gi|302192152|gb|ADK99723.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264]
Length = 315
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 106/310 (34%), Positives = 161/310 (51%), Gaps = 12/310 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LALA + + ++ ++P +V++ + T GD+I +R L E+GGK LF
Sbjct: 3 TIRIGTRRSALALAQSGMMQRAIAAAMQLPIEEVVLVEIVTTGDQIQDRRLMEVGGKALF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+EIE+ L+ G +D AVHS KD+P + GL I+A RED RD FIS L+ L
Sbjct: 63 TKEIEEALLDGRVDIAVHSMKDVPAEQPPGLTIAAIPEREDARDAFISRDFDELEHLPHG 122
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GT+SLRR+A L R D+ + RG I+TRL + AILLA +G+ RL +
Sbjct: 123 GRLGTASLRRQAQALALRPDLQIEMLRGNIDTRLRRAAEGDFDAILLAASGLNRLGRSDA 182
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ L+++ F P+PGQGA+ ++T V+ +NH T V ER + L+GSC
Sbjct: 183 VRGFLSVDAFLPAPGQGALALQTR-EGDTDHAWVQAMNHGPTALCVAAERGAMVALEGSC 241
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR-----------CDAINIGRDAA 293
++A+ A+ G L +LA DG + +A ++G
Sbjct: 242 RTAVGAHAHIDGDRLTLTTEMLAPDGTARWRRAGEITLITAPDAPGRAMDNARDLGLRLG 301
Query: 294 QYIRFISNKN 303
+ +
Sbjct: 302 HEVHAAAGDQ 311
>gi|190345502|gb|EDK37399.2| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC
6260]
Length = 371
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +IG R S LA+A + + L+ K P I+ LST GD+I ++ L GGK
Sbjct: 8 TTKHIQIGGRKSTLAVAQSNIVKKHLVA--KFPQLKCSILALSTLGDQIQSQPLYSFGGK 65
Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
L+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV +
Sbjct: 66 ALWTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRSDPRDVLVMRKGS 125
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILL 171
+SL +L +++GTSS+RR + L++ + RG I TR+ KL+ +LL
Sbjct: 126 KYKSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLL 185
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++R+ + I L+ D + GQGA+ +E + + ++L++ I T +
Sbjct: 186 AAAGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAIEDVPTSLCCH 245
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
ER+ + L+G C I +T L F IV++ DG F E + +A
Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVEDKIEMKVTTKSEAD 305
Query: 287 NIGRDAAQYIRFISNKNVF 305
+G+ + K +
Sbjct: 306 ALGQQLGDKLIAKGAKEIL 324
>gi|46130844|ref|XP_389153.1| hypothetical protein FG08977.1 [Gibberella zeae PH-1]
Length = 335
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 151/312 (48%), Gaps = 15/312 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR SPLALA +L + P H+ I ++T GDR N L GGKGL+T +
Sbjct: 13 VGTRKSPLALAQTQIVVDALKQ--RFPDHDFPIHSMTTTGDRDQNTALYNFGGKGLWTSQ 70
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTAQSLKD 120
+E++L++ E+D VHS KDMPT L +G + RED RD + H ++L D
Sbjct: 71 LEERLVNRELDIVVHSLKDMPTVLPEGCVLGCVTSREDPRDTLVIKKELQDKHGWKTLAD 130
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRL 179
L S+IGTSS+RR A L+R + D RG I+TRL KL + I+LA AG++R+
Sbjct: 131 LPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLRKLEEDPDLTGIILAAAGLQRM 190
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
I + L E+ + GQGA+ +E ++ K +K I +E T + ERA +
Sbjct: 191 DLGHHITQFLESENGGILYAVGQGALGVECRGDDEKVLGFLKTIENEQTALACEAERALM 250
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQ 294
L+G C I L V++ G + +A G+ A+
Sbjct: 251 RALEGGCSVPIGVETKWIDDKLRMKATVVSLRGDEGVDCEIAEAIKTHDEADKFGKKVAE 310
Query: 295 YIRFISNKNVFN 306
+ + + +
Sbjct: 311 TLVEQGAQKILD 322
>gi|58040313|ref|YP_192277.1| porphobilinogen deaminase [Gluconobacter oxydans 621H]
gi|58002727|gb|AAW61621.1| Porphobilinogen deaminase [Gluconobacter oxydans 621H]
Length = 357
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 158/313 (50%), Gaps = 9/313 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGG 60
K P R+G+R SPLAL + L + +ST+GDR + L EIGG
Sbjct: 40 KLPLRVGSRASPLALVQTRNFLTRLTRFCPVLRDMGAFQEYQISTEGDRNLVQRLAEIGG 99
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EI + L +G ID AVHS KD+ T L GL ++ L RED RD I D
Sbjct: 100 KGLFAKEIHEALAAGRIDFAVHSLKDLETNLPPGLVLACTLKREDARDALILRDRDVKVD 159
Query: 121 LAL-------HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
++IG +S+RR+A +L R D+ RG ++TRL+KL A LLA
Sbjct: 160 PQRPYDCLPEGALIGCASVRRQAQMLHVRPDLRFCLLRGNVQTRLDKLRAGACEATLLAL 219
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG++RL E + +L + P+ GQG + + ++ + +EL+ I + E
Sbjct: 220 AGLRRLGMEDRVDVVLEPDQMLPASGQGIVGVTVRESDLELRELLSAIEDPEARAVSTAE 279
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
RA LAELDGSC++ I G+A + L G++ + DG G +A +G + A
Sbjct: 280 RALLAELDGSCRTPIGGYARIENGVLKLSGMIASEDGTFLLRREIEGAPLEAARLGTELA 339
Query: 294 QYIRFISNKNVFN 306
+R + ++F+
Sbjct: 340 DELRRDTPAHIFD 352
>gi|38233015|ref|NP_938782.1| porphobilinogen deaminase [Corynebacterium diphtheriae NCTC 13129]
gi|55976429|sp|Q6NJK0|HEM3_CORDI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|38199274|emb|CAE48905.1| Porphobilinogen deaminase [Corynebacterium diphtheriae]
Length = 294
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 9/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA + R L P+ ++ ++T GD + IG G+F
Sbjct: 2 TLKIGTRGSLLATTQSGHVRDDLR------PYEAELVIVTTHGDVNM-APVERIG-VGVF 53
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + ++L +G D AVHS KD+PT+L + R D RD I+ SL DL
Sbjct: 54 TQALREELHTGGCDIAVHSFKDLPTELDPRFHL-VVPKRADFRDCLIARDGLSLADLPAG 112
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 113 ALIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVTSGELDAVVLAYAGLTRVGRGDE 172
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + +DF P+P QGA+ +E ++ A+E + I E ER L L+ C
Sbjct: 173 ATQVFDPQDFLPAPAQGALAVECRADDAYAREAIDSICDEQAQVCAVTERVVLNRLEAGC 232
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A A TL V+A DG + + + + + + + +
Sbjct: 233 TAPVAAHATLNDGTLTLTAAVIALDGSKVVRRELSAPVAENVALAEELTRALIADGAATI 292
Query: 305 F 305
Sbjct: 293 L 293
>gi|254390668|ref|ZP_05005882.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294812261|ref|ZP_06770904.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064]
gi|326440901|ref|ZP_08215635.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197704369|gb|EDY50181.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294324860|gb|EFG06503.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064]
Length = 311
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 6/308 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E + RI +R SP+ALA R+ L P ++P++T GDR L +GGK
Sbjct: 3 ETEVMRIVSRSSPMALAQVERVRAELAVAR--PGVRTEVVPVTTSGDRWMG-DLAALGGK 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLK 119
G FT+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L
Sbjct: 60 GAFTKEVDAALLAGEADLAVHCMKDVPADRPLPAGTTFAAFLRRDDIRDALVHPGGLTLD 119
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + IGTSS+RR A L + + RG RL KL A A+LLA +G++R+
Sbjct: 120 ELPDGTRIGTSSVRRIAQLASSHPQLECVPMRGNANRRLEKLAAGDADALLLAVSGLERI 179
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ VI E+L+ + P G G + ++ + + + V + T V ER L
Sbjct: 180 GRTDVISEVLSADVMCPPIGAGVLALQCREEDEETIDAVSGLGDPATHREVTAERMLLHV 239
Query: 240 LDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C S IAG+A + G L V DGK D +G A +
Sbjct: 240 LQGHCNSPIAGYARAERGGELSLRAKVFTPDGKRVLNAHEWAGPLDPATLGTSVAVALLR 299
Query: 299 ISNKNVFN 306
+ + +
Sbjct: 300 QGARELID 307
>gi|226305131|ref|YP_002765089.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4]
gi|226184246|dbj|BAH32350.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4]
Length = 324
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 15/311 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ + TKGD+ T+ + +IG G+F
Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIIKTKGDQSTD-PVQKIG-VGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L
Sbjct: 65 TAELREALLDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ +
Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E + P+P QGA+ +E N + ++ + T +V ERA LAEL+ C
Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSANVELAAILAEHDDAGTRAAVTAERALLAELEAGC 244
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A L G A DG G A +GR A+
Sbjct: 245 TAPVGAIAEIVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGAPDKAEELGRAVARE 304
Query: 296 IRFISNKNVFN 306
+ + + + N
Sbjct: 305 LLELGARELMN 315
>gi|320582367|gb|EFW96584.1| Phorphobilinogen deaminase [Pichia angusta DL-1]
Length = 413
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 17/319 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIG+R S LA+ + + ++ P I+ LST GD++ N+ L GGK
Sbjct: 79 NNTVRIGSRKSQLAVVQSEIVGIGIQKLY--PKLQTPIVKLSTLGDQVQNKPLYSFGGKS 136
Query: 63 LFTEEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---T 114
L+T+E+E L+ +ID VHS KDMPT L ++ L RED RD +
Sbjct: 137 LWTKELEVLLLQSFGEFEQIDMIVHSLKDMPTSLPDEFELGCILQREDPRDALVMRKDSP 196
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLA 172
+SL DL SV+GTSS+RR A LL+ ++ RG + TR+NKL+ + ++LA
Sbjct: 197 YKSLSDLPDGSVVGTSSVRRSAQLLKNHPNLRFKSIRGNLNTRINKLDAPDSDYACVILA 256
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ R+ I + L E+ + GQGA+ +E N+PK +++ + ++ + T
Sbjct: 257 AAGLIRINMGHRITQFLGPEEMLYAVGQGALGVEIRKNDPKMKKICQRLDCKSTSIRCRA 316
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR---CDAIN 287
ER L L+G C + ++ T LY +VL+ +G E + +A+
Sbjct: 317 ERELLRTLEGGCSVPVGVWSDYNKDTHELYMKSVVLSVEGTQSVEKTLIRKVENFEEAVA 376
Query: 288 IGRDAAQYIRFISNKNVFN 306
G + A + K + +
Sbjct: 377 FGHELALLLINGGAKAILD 395
>gi|317013683|gb|ADU81119.1| porphobilinogen deaminase [Helicobacter pylori Gambia94/24]
Length = 306
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/303 (32%), Positives = 152/303 (50%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + T GD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECS---MESEIQIVKTTGDKILDAPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183
+ +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL +
Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ ++ + K
Sbjct: 239 CQIPIGVHASLMGDEVKIRAVLGLPNGKEVITKEKQGDKTKAFDLIQELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|156846242|ref|XP_001646009.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM
70294]
gi|156116680|gb|EDO18151.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM
70294]
Length = 327
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ IG R S LA+A + + + + + + P + I+ L T GD+I ++ L GG
Sbjct: 1 MSKEVLVIGGRSSKLAVAQSTKVKELIEE--QFPQYECRIVALKTLGDQIQSKPLYSFGG 58
Query: 61 KGLFTEEIEKKLISG----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
K ++T+E+E L ID VHS KD+PT L G +I A R D D +
Sbjct: 59 KAVWTKELEDLLYHEDAKERIDLIVHSLKDVPTLLPDGFEIGAITKRVDPSDCLVMPIDS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILL 171
+SL DL S++GTSS+RR A L R + RG I TRL K+++ ++H I+L
Sbjct: 119 KYKSLDDLPNGSIVGTSSIRRSAQLKRRYPHLKFESVRGNIHTRLKKVDDPESHYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + N + GQGA+ IE + K + ++ I+ E+T
Sbjct: 179 AAAGLIRMGLESRITQTFNSTMMYHAVGQGAMGIEIREGDEKLRNILSKISDEETTVCCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVS----RNGNRCDA 285
ER+ + L+G C I L GIV+ DG E ++ D+
Sbjct: 239 AERSLMRTLEGGCSVPIGVETKYDASKKELLLKGIVVDVDGTKAIEEQHSIIIQDSKEDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
+ G+ A+ ++ K + +
Sbjct: 299 MACGKALAEKMKQAGAKTILD 319
>gi|302541659|ref|ZP_07294001.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC
53653]
gi|302459277|gb|EFL22370.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC
53653]
Length = 311
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT
Sbjct: 7 IRIVSRSSPMALAQVERVRTELAALR--PGIRTEVVPVTTSGDRWMG-DLSKLGGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L +
Sbjct: 64 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDQMPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + RG RL K+ A++LA +G++R+ +
Sbjct: 124 GTRIGTSSVRRVAQLAVTHPHVECVPMRGNANRRLEKMAAGDCDALMLAVSGLERIDRTD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI EIL +E P G G + ++ ++ E V + + W + ER L L G
Sbjct: 184 VISEILPVETMCPPIGAGVLGLQCREDDTTTIEAVAGLGDTEVWKEITAERMLLHVLQGH 243
Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V + DGK + D +G A + +
Sbjct: 244 CNSPIAGYAKAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 303
Query: 303 NVFN 306
V +
Sbjct: 304 EVID 307
>gi|282865792|ref|ZP_06274842.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
gi|282559436|gb|EFB64988.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
Length = 311
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L + P ++P+ T GD L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRNELAARY--PALRTEVVPVRTTGDTWLG-DLSQVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLDELPP 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S IGTSS+RR A L ++ + FRG RL KL + A+LLA +G++R+ +
Sbjct: 124 GSRIGTSSVRRTAQLAASHPELRCVPFRGNANRRLAKLAAGEVDALLLAVSGLRRIGRPD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI +IL E P G G + ++ ++ + V +NH T+ + ER FL L G
Sbjct: 184 VISDILGPETMIPPIGAGVLALQCRQDDTATIDAVAALNHPATYREITAERMFLHVLQGH 243
Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L G V DGK D +G A + +
Sbjct: 244 CNSPIAGYATSHRNGDLSLRGCVFTPDGKTVLNAHEWAGPLDPATLGTSVAVTLLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 ELID 307
>gi|326383045|ref|ZP_08204734.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395]
gi|326198181|gb|EGD55366.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395]
Length = 315
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 93/309 (30%), Positives = 144/309 (46%), Gaps = 15/309 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A + L H ++ +ST GD ++ + +IG G+F
Sbjct: 8 TIRIGTRGSLLATTQAQDIADRLTAA----GHPAELVIISTAGDT-SSAPVAQIG-VGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T I L SGE D A+HS KD+PT L ++A R D RD +S L +L
Sbjct: 62 TTAIRLALRSGECDVAIHSYKDLPTAPEDDLAMAAVPTRVDPRDALVSRDGMVLGELPSG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSS RR A L + + RG +++RL K+ + + AI++A AG+ R+ + V
Sbjct: 122 SVVGTSSPRRAAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAIVVARAGLVRIGRADV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L+ +P QGA+ +E ++ + ++ ++ T +V+ ERA LA L+ C
Sbjct: 182 VTEALDPLVMLSAPAQGALAVECRSDDAELVRILAELDDPSTRAAVDAERAVLATLEAGC 241
Query: 245 KSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A S L V A DG S G A +G+D A
Sbjct: 242 TAPVGALAEVVDSIDEDGRIFAELSLRAAVAAEDGSEVIRASVVGPVDRAAQLGKDLAAE 301
Query: 296 IRFISNKNV 304
+ + +
Sbjct: 302 LLELGAAAL 310
>gi|45185123|ref|NP_982840.1| ABL107Cp [Ashbya gossypii ATCC 10895]
gi|55976464|sp|Q75DY0|HEM3_ASHGO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|44980759|gb|AAS50664.1| ABL107Cp [Ashbya gossypii ATCC 10895]
Length = 326
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 155/321 (48%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RI R S LA+ + + + + P + ++ T GD++ ++ L GG
Sbjct: 1 MGEETLRIAGRRSKLAVIQSESVKEIVQR--EFPNYTCTVLAKQTLGDQVQSKPLYAFGG 58
Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---H 113
K L+T+E+E L ID VHS KDMPT+L +G ++ A R D D +
Sbjct: 59 KALWTKELEDLLYEEDLDQRIDMIVHSLKDMPTQLPEGFELGAITKRVDPSDCLVMAAGS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
++L DL SV+GTSS+RR A L R + RG I+TRL KL++ N+ I+L
Sbjct: 119 PYKTLGDLPNGSVVGTSSIRRSAQLRRRYPHLVFASVRGNIQTRLKKLDDPENECKCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ RL E I + + + GQGA+ IET + + Q ++ + ++
Sbjct: 179 ATAGLVRLGLESRITQRFDSTIMLHAVGQGALGIETRTGDERLQAILAKVADRNSTICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN----GNRCDA 285
ER+ + L+G C I ++ T L G+V++ DG E + + ++ DA
Sbjct: 239 AERSLMRTLEGGCSVPIGVYSTFDEETSMLTLDGLVVSVDGADAAEATVSYKIKSDKEDA 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
I G+ A + K + +
Sbjct: 299 IACGQLLAAKLLEAGAKKILD 319
>gi|157803668|ref|YP_001492217.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel]
gi|166217783|sp|A8EYJ9|HEM3_RICCK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157784931|gb|ABV73432.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel]
Length = 301
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 105/301 (34%), Positives = 163/301 (54%), Gaps = 5/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL + +P N I+P++T GD I N+ L +IGG
Sbjct: 1 MT-HSIRIGTRKSPLALIQTNLVIQQIKQF--VPDINYKIVPITTSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEDLIIAAVLEREDPRDVFVCLKYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +++IG+S++RRK + + RSD+ V FRG +++R+ KL N + A +LAYAG+KRL
Sbjct: 118 LPQNAIIGSSAVRRKTFIEKIRSDLKVTVFRGNVDSRIKKLMNGEVDATILAYAGLKRLN 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ E INH T++ + ERAFL
Sbjct: 178 AFNPQYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLETCNQINHLTTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LD +C++ IA ++ Y + ++ + + N + G AA+ +
Sbjct: 238 LDANCRTPIAAYSKYLDKDNIETDFMLGNLESSKITFHTETTNIKTSKEAGIKAAKIMLS 297
Query: 299 I 299
Sbjct: 298 E 298
>gi|327290907|ref|XP_003230163.1| PREDICTED: porphobilinogen deaminase-like, partial [Anolis
carolinensis]
Length = 351
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 156/338 (46%), Gaps = 35/338 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA L H P + II ++T GD+I + L++IG K
Sbjct: 8 KNQTIRVGTRKSQLARIQTDSVVEMLQKHH--PQLHFEIIGMTTTGDKILDTALSKIGEK 65
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 66 SLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPHDAVVFHPKHVGKTL 125
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
L SVIGTSSLRR A L R + D RG + TRL KL+ + AI+LA AG++
Sbjct: 126 SSLPDKSVIGTSSLRRAAQLKRAFPQLQFKDIRGNLNTRLKKLDEKDDFSAIVLATAGLR 185
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ E I +IL + + GQGA+ +E + + E+V V++ +T ERAF+
Sbjct: 186 RMGWEDRIGQILTPMECLYAVGQGALAVEVRARDQEILEMVSVLHDGETVLRCIAERAFM 245
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCDAI 286
L+G C +A K S LY G V + DG + G +
Sbjct: 246 KHLEGGCSVPVAVSTTLKDSQLYLTGAVYSLDGSESLCETMQTNVKFPMEDEEGPDDNIQ 305
Query: 287 NIGR----------DAAQY--------IRFISNKNVFN 306
++G AA+ + + + +
Sbjct: 306 HLGIMARTEPRAAQAAAEKLGLDLAALLLSQGARPILD 343
>gi|302870086|ref|YP_003838723.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029]
gi|315503637|ref|YP_004082524.1| porphobilinogen deaminase [Micromonospora sp. L5]
gi|302572945|gb|ADL49147.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029]
gi|315410256|gb|ADU08373.1| porphobilinogen deaminase [Micromonospora sp. L5]
Length = 328
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + +L P + ++ + T GDR + + G G+F
Sbjct: 4 PLRLGTRGSALAMAQSGHVAEALTAATGRP---VELVEVVTAGDR--STAPVQRLGVGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L +GEID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALTAGEIDFAVHSYKDLPTAAAPGLHVAAVPPRQDPRDALVATNGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182
+ +GT +LRR A L + V RG ++TRL ++ + A++LA AG+ R+ +
Sbjct: 119 ARVGTGALRRIAQLHALGMQLEVSPIRGNVDTRLGRVLGPDADLDAVVLARAGLNRIGRA 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+P QGA+ +E ++ EL+ +++H + ++ ERA LA L+
Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDQDVIELLALLDHAPSRAAITAERALLATLEA 238
Query: 243 SCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
C + +A +A +Y G V++ DG +SR G DA IG+
Sbjct: 239 GCSAPVAAYAVLAEGEPTDEGDVNQEIYLRGAVISPDGTRDLRLSRTGTPADAAEIGKAL 298
Query: 293 AQYIRFISNKNVF 305
A + + ++
Sbjct: 299 AAELLELGADSIL 311
>gi|306819824|ref|ZP_07453478.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304552071|gb|EFM40008.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 301
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 154/305 (50%), Gaps = 7/305 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ + RI R S LAL L +K N I+ + T GD+ L+EIG
Sbjct: 1 MKMQTVRIAGRKSKLALVQTQRVIDLLKQKYK--DVNFEIVTVETLGDKNLKEKLSEIGT 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLK 119
KGLFT EIE+ L++G +D AVHS KDMPT ++ L+I AY+ RE +DV + +S+K
Sbjct: 59 KGLFTFEIEQMLLNGSVDMAVHSLKDMPTDFIRDLKIGAYIKRESNKDVIVFNKDYKSVK 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL ++ IGTSSLRR+ + + D V + RG I TRL ++ + AI+LA + RL
Sbjct: 119 DLPKNAKIGTSSLRREVQIKKLGKDFEVANIRGNIHTRLKRMKDENFDAIILAKVALTRL 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + F + GQG IC++ +N K +++++ +N +T V ER FL
Sbjct: 179 NLQDELVFEELP--FVSAAGQGCICVQVKKDNKKIEKMLEFLNDAETQSCVMAEREFLHT 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ G C + + + G Y V + DGK + D N+G+ AQ +
Sbjct: 237 IGGGCHTPVGAYCEKIGQIYRIYAFVSSLDGKKYLSCEI--KSKDTENLGKQTAQRLIAK 294
Query: 300 SNKNV 304
+
Sbjct: 295 GADKI 299
>gi|148693633|gb|EDL25580.1| mCG10727, isoform CRA_a [Mus musculus]
Length = 371
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 93/335 (27%), Positives = 142/335 (42%), Gaps = 58/335 (17%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 56 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 113
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 114 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFI---- 169
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK 180
++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 170 ----------------------GKTLETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMG 207
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L
Sbjct: 208 WQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHL 267
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD----- 284
+G C +A K LY G V + DG + + +G D
Sbjct: 268 EGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLVG 327
Query: 285 -------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 328 ITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 362
>gi|255004322|ref|ZP_05279123.1| porphobilinogen deaminase [Anaplasma marginale str. Virginia]
Length = 303
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 4/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ + P + + + T GD +R L +IGG
Sbjct: 1 MHAPVVRLGTRGSTLALIQAEEVKAAIAA--RFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+GSC + +A A + ++ D + R DA ++G + ++
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLA-HDSRTMVFAERTFPERDAESVGFEMGVMLKDE 297
>gi|56416851|ref|YP_153925.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries]
gi|56388083|gb|AAV86670.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries]
Length = 303
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 4/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG
Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDIKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+GSC + +A A + ++ D + R DA ++G + ++
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLA-HDSRTMVSAERTFPERDAESVGFEMGVMLKDE 297
>gi|15604330|ref|NP_220846.1| porphobilinogen deaminase [Rickettsia prowazekii str. Madrid E]
gi|11386862|sp|Q9ZD77|HEM3_RICPR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3861022|emb|CAA14922.1| PORPHOBILINOGEN DEAMINASE (hemC) [Rickettsia prowazekii]
gi|292572083|gb|ADE29998.1| Porphobilinogen deaminase [Rickettsia prowazekii Rp22]
Length = 299
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 4/298 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR S LAL + + P N I+P+ T GD I N+ L +IGGK L
Sbjct: 3 NSIRIGTRNSTLALIQTNLVIEQIKQI--FPDINCEIVPIITSGDLIQNKPLYDIGGKAL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ +ID AVHS KD+P K+ L I+A L RED RDV + QS++ L
Sbjct: 61 FLKEIEQALLDKKIDLAVHSLKDIPGKIPVELVIAAVLEREDPRDVLVCLNYQSIETLPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
++VIG+S++RRKA + + R D+++ FRG +++R+ KL + AI+L+YAG+KRL
Sbjct: 121 NAVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDAIILSYAGLKRLNVFN 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P GQG I +E ++ + INH T++ + ERAFL LD
Sbjct: 181 QKYCHLIEYSKMLPCIGQGVIAVEIRKDDNAMFNICSQINHLPTFELIKPERAFLEYLDA 240
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+C + IA +A Y + ++ D + N + G AA+ +
Sbjct: 241 NCSTPIAAYAQYLDAYNIQIDFMLGNLDCTKIIFQTEITNIKTSKICGIKAAKMMLAQ 298
>gi|296268254|ref|YP_003650886.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833]
gi|296091041|gb|ADG86993.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833]
Length = 303
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 156/304 (51%), Gaps = 7/304 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P R+GTR S +A + + L ++ ++T GD ++ LT++GG
Sbjct: 1 MSA-PLRLGTRKSLMATSQSRRVAERLAQAT---GRRSELVGITTFGD-VSRAHLTQLGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F E+ LI+GE+D AVHS KD+PTK + I+A PR+D RD F+ +
Sbjct: 56 TGVFVSELRNALIAGEVDFAVHSLKDLPTKGDDRIVIAAIPPRDDPRDAFVGRVP--FSE 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A L R D+ + RG +TRL K+ + + I+LA AG+ R+
Sbjct: 114 LPPGARVGTGSPRRIAQLRMLRPDLEYVPIRGNADTRLGKVTSGELDGIVLAAAGLGRIG 173
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+E+ I ++ +E P+PGQGA+ +E + EL+ I+ T D+V ER+ LA L
Sbjct: 174 REEAIAQVFEVEQVLPAPGQGALAVECRADRADLIELLSAIDDRATRDAVTAERSVLAAL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ C + + A G+ L V++ DG+ S +G A+ +GRD A +
Sbjct: 234 EAGCAAPVGAHASGDGNVLSLTAAVVSVDGRRSVRKSVSGPASAAMELGRDLAAAMLAEG 293
Query: 301 NKNV 304
+
Sbjct: 294 AGTL 297
>gi|254303623|ref|ZP_04970981.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323815|gb|EDK89065.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 301
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 147/306 (48%), Gaps = 7/306 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P I + T GD+ ++I
Sbjct: 1 MKKNIIIGSRGSILALAQANLVKEKLE--LNYPNLTFEIKEIVTSGDKDLKSNWENSDIS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F V + +GK + I AA+ I+
Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IKAVVEDYLVKGKEIAHMAAEEIKNK 295
Query: 300 SNKNVF 305
KN
Sbjct: 296 IAKNTL 301
>gi|291452105|ref|ZP_06591495.1| porphobilinogen deaminase 1 [Streptomyces albus J1074]
gi|291355054|gb|EFE81956.1| porphobilinogen deaminase 1 [Streptomyces albus J1074]
Length = 323
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 89/321 (27%), Positives = 154/321 (47%), Gaps = 21/321 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ + P + ++ ++T GD L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVHQLTGRP---VELVEITTYGDTSR-EHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT L ++A PRED RDV I+ ++
Sbjct: 57 TGVFVAALREALVRGEVDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFEE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISV----IDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L + + + RG I+TR+ + + + A++LA AG+
Sbjct: 117 LPEGARVGTGSPRRMAQLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI----NHEDTWDSVNC 232
R+ + + E L+++ P+PGQGA+ IE + + + + T +V
Sbjct: 177 HRVGRSDEVTEYLSVDTILPAPGQGALAIECAAGHEADGLPLAAVLAELDDPATRAAVTA 236
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----C 283
ER+ LA L+ C + + A + G+V + DG ++S G
Sbjct: 237 ERSLLAALEAGCSAPVGALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTGPVPTTHD 296
Query: 284 DAINIGRDAAQYIRFISNKNV 304
+A +G + A + +
Sbjct: 297 EAAALGTELAAEMLAKGAAGL 317
>gi|225012137|ref|ZP_03702574.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A]
gi|225003692|gb|EEG41665.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A]
Length = 300
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 151/299 (50%), Gaps = 8/299 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A E ++ L + ++ + + GD+ N+ L +G +G+FT
Sbjct: 2 VRIGTRKSKLALWQANEVKAILES----EGYPCCLVHIESNGDQDLNQPLYAMGIQGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ ++ L++ +ID AVHS KD+PT L KG+ I A L R + DV + + A +
Sbjct: 58 KTLDTALLNEKIDIAVHSLKDVPTLLPKGINIKAVLSRGNPMDVLVYNPAFMGWETEAS- 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT SLRRKA LR V + RG ++ R+ KLNN+ + A AG+ RL +
Sbjct: 117 -IGTGSLRRKAQWLRKNPKHQVENLRGNLQKRIEKLNNSNWSGAIFAQAGLDRLNLLQDN 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ +E P+P QG I I + N + ++ IN +T ER+FL L+G C
Sbjct: 176 YEV--LEWMIPAPSQGIIGIASLEKNKELNAVLDKINCAETSLCAQIERSFLNTLEGGCT 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I AYC +TLYF G + + DG I N + G AAQ I K +
Sbjct: 234 APIGAHAYCIENTLYFKGGLFSLDGTIAIVHEENTPLENTKEYGVKAAQKILNEGGKEL 292
>gi|198415361|ref|XP_002126885.1| PREDICTED: similar to hydroxymethylbilane synthase, b [Ciona
intestinalis]
Length = 359
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 101/280 (36%), Positives = 150/280 (53%), Gaps = 6/280 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
R+GTR S LA+ + L ++K + I+ ++T GD+I +++L++ G K
Sbjct: 4 NNILRVGTRKSELAMVQTNWVVNQLKSLNK--SLEVEIVQMATIGDKILDKSLSKTGEKS 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E LI+ ++D V+S KDMP+ L L ISA RED RD I H + L+
Sbjct: 62 LFTKELEDALIANQVDLVVNSLKDMPSTLPPNLTISAVSRREDPRDAVIMHPDNVGKRLE 121
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
DL S++GTSSLRR A L + D+ RG + TRL KL++ + AI+LA AG+KR
Sbjct: 122 DLPPGSIVGTSSLRRVAQLKKLFPDLKFKSIRGNLNTRLRKLDDASNFSAIILAVAGVKR 181
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ I L ++ + GQGA+ IET ++ K+ +LV ++ +DT ERAFL
Sbjct: 182 MGWNARISYTLTTDECLYAIGQGALGIETRADDMKSIKLVSQLHDKDTVIRTVAERAFLK 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
L G C A ++ LY G V DG +
Sbjct: 242 TLGGGCSVPQAVHSWIIEDELYMRGAVFNLDGSKSLYETM 281
>gi|171692929|ref|XP_001911389.1| hypothetical protein [Podospora anserina S mat+]
gi|170946413|emb|CAP73214.1| unnamed protein product [Podospora anserina S mat+]
Length = 341
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 106/325 (32%), Positives = 155/325 (47%), Gaps = 21/325 (6%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M ++ +IGTR S LALA ++L P + ++T GDR L +G
Sbjct: 1 MTEEYTVKIGTRRSALALAQTDLVIAALSKAAG-PSVKFEVHSMATMGDRDKTTPLPSLG 59
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114
KGL+T E+E KL++ E+D VHS KDMPT L +G + A RED RDV +
Sbjct: 60 -KGLWTSELEAKLVNKEVDVIVHSLKDMPTSLPEGCVLGAVTQREDARDVVVFPRRQGGE 118
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172
++LKDL SV+GTSS+RR A L R + D RG I+TRL K + N AI+LA
Sbjct: 119 YKALKDLPEGSVVGTSSVRRAAQLKRSYKGLVFRDVRGNIDTRLAKCDDENGGYDAIILA 178
Query: 173 YAGIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
AG+ RL ++ I + L + GQGA+ +E + K EL+K EDT
Sbjct: 179 AAGLLRLGYDERIGQYLESSTEGGGLLHAVGQGALGLEIREGDEKIAELIKAAVDEDTMM 238
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGST----LYFYGIVLASDGKIFH---EVSRNGN 281
+ ER+ + L+G C I L V++ DGK + N
Sbjct: 239 AAFAERSVMRTLEGGCSVPIGVETKWVEDEGEKKLRLKVAVVSLDGKKAVDGERTEKIAN 298
Query: 282 RCDAINIGRDAAQYIRFISNKNVFN 306
+A +G+ A+ + + + +
Sbjct: 299 LEEAEALGKSLAEKLAREGAQEILD 323
>gi|149369456|ref|ZP_01889308.1| porphobilinogen deaminase [unidentified eubacterium SCB49]
gi|149356883|gb|EDM45438.1| porphobilinogen deaminase [unidentified eubacterium SCB49]
Length = 313
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 147/311 (47%), Gaps = 16/311 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S LAL A + L + + ++P+ + GD + ++ L E+G
Sbjct: 1 MNKVIRIGTRDSELALWQANTVKRQLESL----GYKTELLPVKSTGDLVLDKPLYEMGIT 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+ ++ +++G +D AVHS KD+PT L KG+ +A L R DV ++ S D
Sbjct: 57 GIFTKTLDVAMLNGTVDIAVHSMKDVPTALPKGIIQTAVLERAMTEDVLVT---TSEIDY 113
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
I T SLRRKA L +V+D RG ++TRL KL +N + A AG+ RL+
Sbjct: 114 TKPCTIATGSLRRKAQWLNRYPHHTVVDLRGNVQTRLQKLKDNPWDGAIFAKAGLDRLEY 173
Query: 182 EKVIKEILN--------IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+ + P+P QGA+ I T N+ + V +N+ E
Sbjct: 174 LNNTEITSPDFSGTFENLSWMLPAPAQGAMVIVTLQNDDFTTKAVSKLNNTAADICTQIE 233
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
R FL +L+G C + I A + F G + + DGK EV + ++ + G DAA
Sbjct: 234 RDFLRKLEGGCTAPIGALAQVVEENIQFTGCLFSLDGKTKIEVEKTIDKNNNNG-GVDAA 292
Query: 294 QYIRFISNKNV 304
+ +
Sbjct: 293 IELLENDGAAL 303
>gi|320006816|gb|ADW01666.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331]
Length = 311
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 6/304 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT
Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PDTVTEVVPVRTTGDKWLG-DLSKVEGKGAFT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L+ L
Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLEQLPE 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ IGTSS+RR A L + + FRG RL KL +A A+LLA AG+ R+ +
Sbjct: 124 GTRIGTSSVRRTAQLASSHPHLDCVPFRGNANRRLAKLAAGEADALLLAVAGLHRIGRPD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
VI +IL E P G G + ++ ++ E V +NH T+ + ER FL L G
Sbjct: 184 VISDILAPETMCPPIGAGVLALQCREDDTATIEAVGALNHPGTYREITAERMFLHVLQGH 243
Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C S IAG+A + L V DGK D +G A + +
Sbjct: 244 CNSPIAGYATAHRNGDLSLRACVFTPDGKTVLNAHEWAGPLDPATLGTSVAVSLLRQGAR 303
Query: 303 NVFN 306
+ +
Sbjct: 304 ELID 307
>gi|317064836|ref|ZP_07929321.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
gi|313690512|gb|EFS27347.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
Length = 299
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 154/303 (50%), Gaps = 6/303 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIG 59
KK IG+R S LA+A + + L + P I + T GD N ++
Sbjct: 1 MKKKIVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L
Sbjct: 59 LKSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTLM 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR+
Sbjct: 119 ELPAGAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKRV 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
EK I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F
Sbjct: 179 GLEKEITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSKI 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + G + GI G+ + S + I + A I+
Sbjct: 239 FDGGCHTPMGCHCILDGDKITLTGIYF--KGENGYSASITEDAALGIKTAQKLADIIKEK 296
Query: 300 SNK 302
N
Sbjct: 297 IND 299
>gi|51473654|ref|YP_067411.1| porphobilinogen deaminase [Rickettsia typhi str. Wilmington]
gi|55976371|sp|Q68WR3|HEM3_RICTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|51459966|gb|AAU03929.1| Porphobilinogen deaminase [Rickettsia typhi str. Wilmington]
Length = 299
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 4/298 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR S LAL + + P N I+P+ T GD I N+ L +IGGK L
Sbjct: 3 NSIRIGTRNSTLALIQTNLVIAQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKAL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +EIE+ L+ +ID AVHS KD+P ++ L I+A L RED RDV + +S++ L
Sbjct: 61 FLKEIEQALLDKKIDLAVHSLKDIPGRIPVDLVIAAVLEREDPRDVLVCLNYKSIETLPQ 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182
++VIG+S++RRKA + + R D+++ FRG +++R+ KL + A +L+YAG+KRL
Sbjct: 121 NAVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDATILSYAGLKRLNAFN 180
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
K ++ P GQG I +E ++ + INH T++ + ERAFL LD
Sbjct: 181 KKYCHLIEYSQILPCVGQGVIAVEIRKDDNAMFNICNQINHIPTFELIKPERAFLEHLDA 240
Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+C + I ++ Y + ++ D + N + G AA+ +
Sbjct: 241 NCSTPIGAYSQYLDAYNIQTDFMLGKLDCNKIIFQTEITNINTSRECGIKAAKMMLAQ 298
>gi|328863687|gb|EGG12786.1| hypothetical protein MELLADRAFT_114915 [Melampsora larici-populina
98AG31]
Length = 430
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 104/333 (31%), Positives = 149/333 (44%), Gaps = 33/333 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR S LAL A R H P H I +ST GD+ R L +GGK L+
Sbjct: 44 PIVIGTRNSRLALVQAELVRKLFEISH--PNHPTTIQSMSTAGDQNQGRPLYLMGGKSLW 101
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK---DL 121
T+E+E L+ G +D VH KDMPT L G ++ A L RED RD + + +L
Sbjct: 102 TKELEVALLEGSVDLIVHCLKDMPTSLPPGCELGAILEREDPRDALVIRRDLPFRSLSEL 161
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
SVIGTSS+RR A L R + D RG + TR KL+ ++ I+LA AG+ RL
Sbjct: 162 PAGSVIGTSSVRRVAQLRRRFPQLKFQDIRGNLNTRFRKLDAPDSPYTGIVLAVAGLNRL 221
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-------------AQELVKVINHEDT 226
+ I L+ + + GQGAI IE + ++LVK + H T
Sbjct: 222 ECADRISSYLSPPELYYAVGQGAIGIEIRSRAEEGEVTPRASQRTETVRQLVKSLEHWPT 281
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEV 276
+ ER+ L L+G C + + + L G+V + DG V
Sbjct: 282 ALVCHAERSLLRTLEGGCSVPVGVTSTLLPLPMPCQWAPQARLTLTGVVTSVDGTKEVMV 341
Query: 277 SRNGNR---CDAINIGRDAAQYIRFISNKNVFN 306
++ + D+I +G + A + +
Sbjct: 342 TKTADIYGPKDSIKLGCELAAELLEAGADEILE 374
>gi|262201010|ref|YP_003272218.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247]
gi|262084357|gb|ACY20325.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247]
Length = 313
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/309 (30%), Positives = 145/309 (46%), Gaps = 15/309 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A +L + H ++ + T GD + + EIG G+F
Sbjct: 8 PIRIGTRGSLLATTQAQTIADALTEA----GHPAELVIIRTAGD-DSAAPVAEIG-VGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T I L + E+D AVHS KD+PT GL I+A PRED RD +S L +L
Sbjct: 62 TTAIRIALHNREVDVAVHSYKDLPTADEPGLYIAAVPPREDPRDALVSRDNMVLGELPPG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGTS+ RR A L + + RG +++RL K+ + + A+++A AG+ R+ +
Sbjct: 122 STIGTSAPRRVAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAVVVARAGLVRIGRADE 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E + P+P QGA+ +E ++ + ++ ++ E T +++ ERA LA L+ C
Sbjct: 182 VTESFDPVVLLPAPAQGALAVECRSDDAQLVRILAELDDESTRAAIDAERAVLAALEAGC 241
Query: 245 KSAIAGFAY----CKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ I A L V A DG S G A +G D A
Sbjct: 242 TAPIGAIAEVVESIDDDGRIFAELSLRAAVAAEDGSDVIRASVVGPVDRAAQLGADLAAE 301
Query: 296 IRFISNKNV 304
+ + ++
Sbjct: 302 LLELGAGDL 310
>gi|239929697|ref|ZP_04686650.1| porphobilinogen deaminase [Streptomyces ghanaensis ATCC 14672]
gi|291438017|ref|ZP_06577407.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672]
gi|291340912|gb|EFE67868.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672]
Length = 319
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 153/317 (48%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ V P + ++P++T GD L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVRQVTGRP---VELVPITTYGDTSR-EHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L GE+D AVHS KD+PT L ++A RED RDV + D
Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDIPTTQPDELVVAAIPVREDPRDVMVGRDVPKFTD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVI----DFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L + + RG ++TR+ + + + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARAHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGM 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+
Sbjct: 177 NRVGRSEEVTDFLSVDTVLPAPGQGALAVECTADNAPLIAALAELDDPLTRAAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A G + G+V +DG ++S G A+
Sbjct: 237 LAALEAGCSAPVGALADLLGDGQTVKEMRLRGVVGTTDGTKLVQLSTTGPVPETHEAAMA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+G + A + +
Sbjct: 297 LGSELATEMLAQGAAGL 313
>gi|222475216|ref|YP_002563632.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida]
gi|255003192|ref|ZP_05278156.1| porphobilinogen deaminase [Anaplasma marginale str. Puerto Rico]
gi|269958734|ref|YP_003328521.1| porphobilinogen deaminase [Anaplasma centrale str. Israel]
gi|222419353|gb|ACM49376.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida]
gi|269848563|gb|ACZ49207.1| porphobilinogen deaminase [Anaplasma centrale str. Israel]
Length = 303
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 4/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG
Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+GSC + +A A + ++ D + R DA ++G + ++
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLA-HDSRTMVSAERTFPERDAESVGFEMGVMLKDE 297
>gi|86133880|ref|ZP_01052462.1| Porphobilinogen deaminase [Polaribacter sp. MED152]
gi|85820743|gb|EAQ41890.1| Porphobilinogen deaminase [Polaribacter sp. MED152]
Length = 530
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 98/307 (31%), Positives = 150/307 (48%), Gaps = 10/307 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K RIGTR S LAL A + R L ++ + I+P+ + GD I ++ L E+G
Sbjct: 1 MQKTIRIGTRESQLALWQANKVRKQLEEL----GYETEIVPIKSTGDIILDKPLYELGIT 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+ ++ L++ +ID AVHS KD+PT L +G+ A L R + D+ + +
Sbjct: 57 GIFTKNLDIALLNEDIDIAVHSLKDVPTALPEGIMQGAVLKRANYSDLLVLKDTEEFFGQ 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK 180
+I T SLRRKA+ L V D RG + TRL+KL N + + A AG++RL
Sbjct: 117 P-GGIIATGSLRRKAMWLNRYPTHKVEDLRGNVNTRLSKLENSETWNGAIFAAAGLERLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K + + P+P QGAI + + + + +NH +T V ER FL L
Sbjct: 176 --LREKGAIPLTWMIPAPAQGAIMLACLEKDQFVIDACEQLNHYETKVCVGIEREFLRLL 233
Query: 241 DGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C + I AY T + F GI+L DG V++ + +D A Y+
Sbjct: 234 EGGCTAPIGALAYVDEKTQEINFKGILLKRDGSKKITVTKTAKLGSHRYLAKDCADYVIN 293
Query: 299 ISNKNVF 305
K +
Sbjct: 294 RGGKELI 300
>gi|119714759|ref|YP_921724.1| porphobilinogen deaminase [Nocardioides sp. JS614]
gi|119535420|gb|ABL80037.1| hydroxymethylbilane synthase [Nocardioides sp. JS614]
Length = 314
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 156/310 (50%), Gaps = 10/310 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P R+GTR S LA + L + + ++ +ST+GDR + GG
Sbjct: 1 MSA-PLRVGTRASVLATTQSGLVADQLREAL---GREVELVTVSTEGDRTQAAGIPLQGG 56
Query: 61 K--GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G+F + L+ GE+D AVHS KD+PT +G+ ++A RED RDV ++ +L
Sbjct: 57 SATGVFVAALRDALLRGEVDVAVHSLKDLPTYPTEGITLAAVPVREDPRDVVVARDGLTL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L + S +GT S RR A L + V+ RG ++TR+ K+ + + A++LA AG+ R
Sbjct: 117 GELPVGSRVGTGSPRRVAQLHALGLGLEVVGIRGNVDTRIGKVRSGECDAVILARAGLAR 176
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + + E+L+ P+PGQGA+ +E ++P A ++ ++ +V ERA LA
Sbjct: 177 IGRLEAVTEVLDPLQMLPAPGQGALAVECRTDDPLAAQVAAALDDPRVRAAVTAERAVLA 236
Query: 239 ELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L+G C + I A G L+ + L+ DG + S +G+ DA +G +
Sbjct: 237 TLEGGCSAPIGALAEIVEGEDGDELWVRSVALSPDGALSVRRSASGSPSDAAGVGTRLGE 296
Query: 295 YIRFISNKNV 304
+ +
Sbjct: 297 QMLADGADRL 306
>gi|193638791|ref|XP_001948145.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Acyrthosiphon
pisum]
gi|328705509|ref|XP_003242834.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Acyrthosiphon
pisum]
Length = 377
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 102/363 (28%), Positives = 164/363 (45%), Gaps = 61/363 (16%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K R+G+R S LAL S L ++H P I+ ++T GDR+ ++ L +IG K
Sbjct: 6 RKTIRVGSRKSELALIQTKFVISQLKELH--PEIEFEIVSMTTMGDRVLDKPLPKIGEKS 63
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
LFT+++E L+SG +D VHS KD+PT + G I A L R+D RD +
Sbjct: 64 LFTKDLEVALLSGTVDFIVHSLKDLPTVMEIGTTIGAILKRDDPRDALVLRDDCKEYQLD 123
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------AHAIL 170
L S IGTSSLRR A L R ++ V D RG + TRL KL++++ I+
Sbjct: 124 SLPSKSFIGTSSLRRTAQLKRKFPNLQVSDVRGNLNTRLKKLDSSQSTGDNTNTNYSGII 183
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AGI+R+ EK + +I++ + + GQGA+ +E + + E+++ ++H +T V
Sbjct: 184 LALAGIQRMGWEKRVSQIIDSDVMLYAVGQGALAVECRLGDDYILEMLEPLHHYETVLQV 243
Query: 231 NCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCD---- 284
ER FL L G C + + + + + G V + DG + S + D
Sbjct: 244 VAERGFLTRLGGGCSAPVGIRSTVCLTKNAMSLDGAVWSLDGAEELQYSSSAELADKKVI 303
Query: 285 -----------------------------------------AINIGRDAAQYIRFISNKN 303
A+ +G + A+ + +
Sbjct: 304 QSHIDQYRGEDGEPPKKCPYKQPRQFVGVTPGKISYLDLDTALKLGTELAENLISKGALD 363
Query: 304 VFN 306
+ N
Sbjct: 364 IMN 366
>gi|164423255|ref|XP_001728039.1| porphobilinogen deaminase [Neurospora crassa OR74A]
gi|55976426|sp|Q6MW51|HEM3_NEUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|38566782|emb|CAE76093.1| related to hydroxymethylbilane synthase [Neurospora crassa]
gi|157070012|gb|EDO64948.1| porphobilinogen deaminase [Neurospora crassa OR74A]
Length = 337
Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 154/321 (47%), Gaps = 18/321 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K
Sbjct: 4 QKETVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------- 114
GL+T E+E KL + E+D VH KDMPT L +G +I RED RDV +
Sbjct: 61 GLWTNELEAKLFNKEVDFIVHCLKDMPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 120
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+SL DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A
Sbjct: 121 YKSLADLPEGAIVGTSSVRRAAQLRRRYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 180
Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T +
Sbjct: 181 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 240
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAI 286
ERA + L+G C I G L V++ DGK V +A
Sbjct: 241 FAERAVMRTLEGGCSVPIGVETKWVGEDQLQLKVTVVSLDGKESVDGQSVEVIKTIEEAE 300
Query: 287 NIGRDAAQYIRFISNKNVFNF 307
+G+ A+ + + + +F
Sbjct: 301 AMGQKLAEDLAKRGAQKILDF 321
>gi|254995040|ref|ZP_05277230.1| porphobilinogen deaminase [Anaplasma marginale str. Mississippi]
Length = 303
Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 4/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG
Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL
Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+
Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ +
Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+GSC + +A A + ++ D + R DA ++G + ++
Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLA-HDSRTMVFAERTFPERDAESVGFEMGVMLKDE 297
>gi|221065751|ref|ZP_03541856.1| porphobilinogen deaminase [Comamonas testosteroni KF-1]
gi|220710774|gb|EED66142.1| porphobilinogen deaminase [Comamonas testosteroni KF-1]
Length = 314
Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 99/289 (34%), Positives = 153/289 (52%), Gaps = 8/289 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF
Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +
Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ I
Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSDRI 186
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+ GQGA+ IE + + + + H TW +V ERA + GSC
Sbjct: 187 RARFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGR 290
+A + + L+ +G V + + D A +G
Sbjct: 247 MPLAAYGRFESDILHMDAAWGDMEGDKGLVRVQASASVTDFASANALGE 295
>gi|302884312|ref|XP_003041052.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI
77-13-4]
gi|256721948|gb|EEU35339.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI
77-13-4]
Length = 332
Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 151/314 (48%), Gaps = 15/314 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R SL + P I L T GD+ + L G K L+
Sbjct: 10 PLRIGTRRSNLAMVQAEGIRDSLQKI--APDRTFEIEALKTLGDKDKSTALYSFGAKNLW 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL SG+ID VH KDMPTKL +++A R+D RD I +LK L
Sbjct: 68 TTELEEKLTSGDIDVVVHCLKDMPTKLPDTCELTAIPLRDDPRDALIVKASLPYNNLKTL 127
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ G++R+
Sbjct: 128 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIMSACGLQRV 187
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
I + L +D + GQGA+ +E + K EL+ + + + + ERA L
Sbjct: 188 GLGHRITQFLGSKDGGIYHAVGQGALGLEIRKGDTKTLELINQLVDQKSTLACLAERALL 247
Query: 238 AELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRD 291
L+G C I + L IV++ DG + + + +A +GR+
Sbjct: 248 RTLEGGCTVPIGVETEWVDESQLLLRMRAIVVSLDGTQSVQDTMDATVKNDDEATALGRE 307
Query: 292 AAQYIRFISNKNVF 305
A + +
Sbjct: 308 LAARLAKGGASEIL 321
>gi|238061239|ref|ZP_04605948.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149]
gi|237883050|gb|EEP71878.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149]
Length = 322
Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 163/307 (53%), Gaps = 11/307 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + ++L + ++ + T GDR ++ + +G G+F
Sbjct: 4 PLRLGTRGSALAIAQSGQVAAALTAAT---GREVELVEVVTAGDR-SSAPVHRLG-VGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L++ ID AVHS KD+PT GL I+A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALVARTIDLAVHSYKDLPTAAASGLHIAAVPPRQDPRDALVAKGGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182
+V+GT +LRR A L + V RG ++TRL ++ + A++LA AG+ RL +
Sbjct: 119 AVVGTGALRRIAQLHALGLQLEVTPIRGNVDTRLARVLGPDADLDAVVLARAGLARLGRT 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI E L+ P+P QGA+ +E ++P EL+ V++H + +V ERA LA L+
Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDPDLVELLAVLDHAPSRAAVTAERALLATLEA 238
Query: 243 SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + +A +A G +Y G V++SDG +SR G DA IG+ A +
Sbjct: 239 GCSAPVAAYAELAEGDVGDEIYLRGAVISSDGTRDLRLSRTGTPADAAEIGKALAAELLE 298
Query: 299 ISNKNVF 305
+ ++
Sbjct: 299 LGADSIL 305
>gi|126662834|ref|ZP_01733833.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38]
gi|126626213|gb|EAZ96902.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38]
Length = 305
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 9/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L D+ + II + ++GD I ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSELALWQAHTVQKKLNDL----GYKTEIIAVKSQGDIILDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++G++D AVHS KD+PT L G+ +A L R + D+ +
Sbjct: 56 TGIFTKTLDIGMLNGQVDIAVHSMKDVPTALPIGIVQAAVLERANTLDILVHKGNLDFL- 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRR+A L + V+D RG + TR+ KLN ++ + + A AG++R+
Sbjct: 115 -TSSGTIATGSLRRQAQWLNKYPNHKVVDLRGNVNTRMQKLNESEWNGAVFAAAGLERIN 173
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++++ P+P QGA+ + + E + +N +T ER FL L
Sbjct: 174 IKPENY--IDLDWMTPAPAQGAMVVVAMEKDTYCTEALAKLNDRETEICTFIERQFLKTL 231
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A + F G++ + +GK H + ++ N N G D A+ I
Sbjct: 232 EGGCSAPIGALAKFTTENIEFEGVLFSLNGKEKHIIKKSCNFDSYKNFGADCAKEILNNG 291
Query: 301 NKNVFN 306
+
Sbjct: 292 GAALME 297
>gi|297543913|ref|YP_003676215.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841688|gb|ADH60204.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 299
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 140/300 (46%), Gaps = 9/300 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGK
Sbjct: 1 MKKVIKVGTRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL
Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + T+ + ER L
Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVF 238
Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+C+ +A + + D + G + + +
Sbjct: 239 GVNCRQPFGAYAQYRKERDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEEF 296
>gi|298252253|ref|ZP_06976056.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963]
gi|297546845|gb|EFH80713.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963]
Length = 334
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 143/320 (44%), Gaps = 20/320 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LA+ + + P I I + T GDR+T+ L+ IGG G
Sbjct: 4 MKRITIGTRASKLAMIQTQWIIERIHQ--QWPGLEIAIEQIRTTGDRVTSVPLSRIGGDG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL---- 118
+F EIE L ID AVHS KD+PT +GL + PRED+RDV +S +
Sbjct: 62 VFVTEIESALQERRIDIAVHSLKDLPTAQPEGLCVLTPGPREDVRDVLVSKGDLHISARG 121
Query: 119 ----KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
IGT SLRR A + D ++ RG ++TRL KL + AI+LA A
Sbjct: 122 TLEGITPGRAPRIGTCSLRRTAQIRHLCPDAEILSLRGNVDTRLRKLEAGEYDAIILAAA 181
Query: 175 GIKRL---KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
G+ RL + + P+PGQGA+ +E + P +EL+ + + + +
Sbjct: 182 GLHRLDLQGTLEGKLSYFPVAQMLPAPGQGALGLEIR-DEPAFRELLAPLQDRNVQAATS 240
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN------GNRCDA 285
ER F+ L C +A A+ L G+V + DG+ V + +A
Sbjct: 241 AERMFMRRLGAGCYLPVAAHAHIIDERLVLRGLVTSLDGQRRILVQQETGWNAYAFLENA 300
Query: 286 INIGRDAAQYIRFISNKNVF 305
+G + A+ ++
Sbjct: 301 ERLGIELAEIALAQGAHDII 320
>gi|121608027|ref|YP_995834.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2]
gi|121552667|gb|ABM56816.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2]
Length = 345
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 11/311 (3%)
Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M + P I TR S LAL A ++ L H++ ++ ++T+GD+I +R+L++
Sbjct: 1 MSRTRPSPIVIATRASRLALWQAGHVQALLQAR----GHSVQLLGMTTRGDQILDRSLSK 56
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
+GGKGLF +E+E L G D AVHS KDMP +L G ++ L RED RD ++S +
Sbjct: 57 VGGKGLFVKELEAALAEGRADIAVHSLKDMPMELPAGFALACVLEREDPRDAWVSPQYAT 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L+ L +V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+K
Sbjct: 117 LEALPPGAVVGTSSLRRQALLQALRPDLRMEPLRGNLDTRLRKLDAGQYQAIVLAVAGLK 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL E I+ P+ GQGA+ IE + + H+ +W +V ERA
Sbjct: 177 RLGLEARIRAPFAPAALLPAAGQGALGIEVRSERQDLCAALAALAHQPSWLAVAAERAVS 236
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAA 293
+ GSC +A + G+ L G+ + A +G A
Sbjct: 237 RAMGGSCSMPLAAYGQFHGAVLQLDAAWGDPQGQAPLVRAQASATVTTLAQAEALGSALA 296
Query: 294 QYIRFISNKNV 304
+ + + +
Sbjct: 297 RRLCADGARPL 307
>gi|145592923|ref|YP_001157220.1| porphobilinogen deaminase [Salinispora tropica CNB-440]
gi|145302260|gb|ABP52842.1| hydroxymethylbilane synthase [Salinispora tropica CNB-440]
Length = 322
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 11/310 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K P R+GTR S LA+A + + +L P + ++ + T GDR + + ++G
Sbjct: 1 MKVPLRLGTRGSALAMAQSGQVAEALTAATGTP---VELVEVVTTGDR-STAPVHQLG-V 55
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L +G ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 56 GVFVSALRDALAAGAIDFAVHSYKDLPTAAAPGLYVAAVPPRQDPRDALVATGGRTLAEL 115
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179
+ +GT +LRR A L + V RG + TRL ++ A++LA AG+ RL
Sbjct: 116 PPGARVGTGALRRIAQLHALGLQLEVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARL 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA
Sbjct: 176 DRTDTITETLDPMLMLPAPAQGALAVECRSDDSALVELLAVLDHAPSRATVVAERALLAT 235
Query: 240 LDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L+ C + +A +A G +Y G V++ DG +SR G DA+ IG+ A
Sbjct: 236 LEAGCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGKALATD 295
Query: 296 IRFISNKNVF 305
+ + ++
Sbjct: 296 LLDLGADSIL 305
>gi|160879516|ref|YP_001558484.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
gi|160428182|gb|ABX41745.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
Length = 295
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 94/295 (31%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LA+ + S+ H +I + T GD I +++L +IGGKG
Sbjct: 1 MRIIRIGSRESELAVRQSRILIDSIKQYHN--EIETELITMKTTGDIILDKSLDKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E++ LI G D +VHS KDMP + + L I A+ RED RD + + D
Sbjct: 59 LFVKELDLALIEGRSDLSVHSLKDMPMETPEELPILAFSKREDPRDALVLPLGCTEIDPV 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IG SS RR L + + RG + TRL KL+ + A++LA AG+KRL E
Sbjct: 119 --LPIGCSSQRRMLQLKKIYPGANYKGIRGNVLTRLEKLDRGEYGALVLAAAGLKRLGLE 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I I E+ P+ GQG + ++ ++ E +K ++E+ CERAF+ L+G
Sbjct: 177 SRISRIFTTEEIIPAAGQGILAVQGRAG--ESYEFLKQFHNEEATFQAVCERAFVKTLNG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S +A +A + + G+ + + G + DA +G A +R
Sbjct: 235 GCSSPVAAYAKVEDEMITVTGLYFDEITGDYITGNLTGKKEDAEQLGEMLANKLR 289
>gi|283798144|ref|ZP_06347297.1| hydroxymethylbilane synthase [Clostridium sp. M62/1]
gi|291074124|gb|EFE11488.1| hydroxymethylbilane synthase [Clostridium sp. M62/1]
gi|295091711|emb|CBK77818.1| hydroxymethylbilane synthase [Clostridium cf. saccharolyticum K10]
Length = 298
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 149/302 (49%), Gaps = 6/302 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K R+G+R S LA+ A ++ P + ++ + T GDRI N++L +IGGK
Sbjct: 1 MNKKVRVGSRDSLLAVRQAELVMEAVRKAS--PETELTLVTMKTTGDRILNQSLDKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E++ L+ G D +VHS KDMP ++ + L I AY PRED RDV + + L +L
Sbjct: 59 GLFVKELDLALMEGRSDLSVHSLKDMPMEIPEELPILAYSPREDNRDVLVLR--EGLSEL 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
H VIGT S RRK R D RG I TRL KL++ + A++LA AG+ R+
Sbjct: 117 PAHPVIGTGSARRKIQAARIYPDAEFKGIRGNIHTRLRKLDSGEYDALILAAAGMIRMGL 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I ++E+ P GQG + ++ + + IN + ER+F+ LD
Sbjct: 177 QDRISRYFSVEEIIPPAGQGIMAVQ--GRKDDSYPFLIKINSPKSQAMAEAERSFVKTLD 234
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C S IA A +G L G+ + S G+ +GR A ++
Sbjct: 235 GGCSSPIAACALIEGDRLKLRGLYFEEKSGRWVVGSLEGSVQGPAELGRSLALRLKSEIE 294
Query: 302 KN 303
+
Sbjct: 295 QE 296
>gi|254778943|ref|YP_003057048.1| porphobilinogen deaminase [Helicobacter pylori B38]
gi|254000854|emb|CAX28786.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Helicobacter
pylori B38]
Length = 306
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I + TKGD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175
Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E N+ L + +N E++ + ER F+
Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I A G + ++ +GK + G++ A ++ ++ +
Sbjct: 235 LNGGCQIPIGVHASLMGDGVKIQAVLGLPNGKEVITKEKRGDKTKAFDLIQELLEEFLQS 294
Query: 300 SNKNVFN 306
K +
Sbjct: 295 GAKEILE 301
>gi|87306341|ref|ZP_01088488.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645]
gi|87290520|gb|EAQ82407.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645]
Length = 308
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 7/302 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A L V ++ II ++T+GD L IGG+G+FT
Sbjct: 4 IRIGTRGSQLAQWQANWVADQLRAV----GTDVEIIHIATQGDVTQG-PLDLIGGRGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ L+ ID AVHS KD+PT+ + GL+++A R DV I+ A + L S
Sbjct: 59 TEIQAALLDNRIDVAVHSLKDLPTEAVVGLRLAAVPARGADGDVLITSKASDVLGLPQES 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGT S+RRKA LL R D + D RG ++TRL KL++ AI+LA AG++RL+ + I
Sbjct: 119 IIGTGSMRRKAQLLHLRRDFQIRDIRGNLDTRLRKLDDGLYDAIILAEAGLRRLELIERI 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ ++ P+ GQGA+ +E + ++ +NHED+ SV ER+ L L G C
Sbjct: 179 RHVIPKAQMLPAVGQGALGLEIRERDSATAAMLAPLNHEDSHYSVLAERSMLRNLRGGCL 238
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ + + L+ G+V++ DG S G A +IGR A + +
Sbjct: 239 APVGAWGRIDPIKQLLFLDGVVVSGDGHHKVTASACGPPNRAEDIGRQVADQLAIQGAER 298
Query: 304 VF 305
+
Sbjct: 299 LI 300
>gi|221633109|ref|YP_002522334.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159]
gi|221155998|gb|ACM05125.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159]
Length = 560
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 110/296 (37%), Positives = 167/296 (56%), Gaps = 5/296 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIG+R S LALA E L + +P ++ ++P+ T GDR +LT +GG
Sbjct: 1 MAAR-IRIGSRGSTLALAQTEEVVERLRRL--VPECSVTVVPIVTTGDRDRATSLTVLGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F +E+ + L++G ID AVHSAKD+PT+L GL + A L RED RDV ++ + L +
Sbjct: 58 SGVFAKELHEALLAGTIDLAVHSAKDLPTQLPPGLVLVAVLAREDARDVLVTSPPRKLGE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSS RR+ALL R R D+ V+D RG ++TRL KL A++L AG++RL
Sbjct: 118 LPAGARVGTSSRRRQALLQRARPDLIVVDIRGNVDTRLRKLREGIVDALVLGAAGLRRLS 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ E L+ ++F P+PGQGA+ + + EL+ ++ ++V ERAFLA
Sbjct: 178 QADLVAEYLDPDEFVPAPGQGALAV-VARESDGRLELLSRLDEPLVHEAVAVERAFLAAF 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + +A G+ L F VL DG F + R +AI R+ +
Sbjct: 237 GSGCSVPLGAYATIAGNRLRFRIAVLLPDG-RFISQCLDWPREEAIERARELGLTL 291
>gi|309775730|ref|ZP_07670726.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916493|gb|EFP62237.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53]
Length = 299
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 112/299 (37%), Positives = 157/299 (52%), Gaps = 3/299 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LALA E R L + + P H + +STKGDR + L ++ KG+F
Sbjct: 3 IRMGTRGSALALAQCKEVRDRLQEAY--PQHTFELCVISTKGDRNQHVALDQMKDKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++L+ G ID AVHS KDMP+ L L + L RED RDV + TA +L+ L H+
Sbjct: 61 KEIEQQLLEGTIDLAVHSMKDMPSTLDARLCFTKTLLREDARDVLVLRTAPTLEQLPPHA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I T S RR LLR R+D+ ++ RG IETRL KL + I+LA AG+KRLK + I
Sbjct: 121 RIATGSKRRSYQLLRQRNDLEIVGIRGNIETRLRKLEEQQLDGIVLAAAGLKRLKLKPYI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ QGA+ IE +LV + + V ERAFL EL+G C
Sbjct: 181 TQTLKECIMVPAVAQGALAIEVCKEREDLIQLVNALCDPALDEEVCAERAFLQELNGGCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI-SNKN 303
+ + +T+ Y + DG ++ +G R A+ + AA +R K
Sbjct: 241 TPLGARCILHDTTVELYAVYGNEDGTRLKQLHVSGAREQAVELAIQAAAVLREQVGGKQ 299
>gi|222823771|ref|YP_002575345.1| porphobilinogen deaminase [Campylobacter lari RM2100]
gi|254800239|sp|B9KGA9|HEM3_CAMLR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|222538993|gb|ACM64094.1| porphobilinogen deaminase [Campylobacter lari RM2100]
Length = 308
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 157/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LAL + ++ L H I + TKGD + + L +IGGKGLFT
Sbjct: 3 LIIATRKSQLALWQSEYIKNKLSQTHS--DLEISLEGFKTKGDVLLDSPLAKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ ++ G+ AVHS KD+P+ KGL ++A RE++ D F+S +SL L +
Sbjct: 61 KELEESMLRGDSHLAVHSLKDVPSFFPKGLVLAAISKREEVNDAFLSEYYESLNALPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE--K 183
+GT+SLRR+ LL R D+++I RG I +RL KL + AI+LA+AGIKRL E
Sbjct: 121 KVGTTSLRRRMQLLALRPDLNIISLRGNINSRLEKLKAKEFDAIILAFAGIKRLGLEKQI 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +++ P+ QGA+ IE +++ + + ++ +N ++ + + ER F+ L+G
Sbjct: 181 KFVKKFELDEMIPAASQGALGIE-SIDDKQILKYLECLNDKNAFVETHIERDFIKTLEGG 239
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A + IV D + R ++ D G A+ + K
Sbjct: 240 CQVPIGINAKIIDEKIEIRAIVGLPDASKILKEKRMIDKQDYAKAGELLAKEMIAKGAKE 299
Query: 304 VF 305
+
Sbjct: 300 IL 301
>gi|317179367|dbj|BAJ57155.1| porphobilinogen deaminase [Helicobacter pylori F30]
Length = 306
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E + K ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLERKFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLTGDRVKIRAVLGLPNGKEVITKEKQGDKTRAFDLIQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|325286453|ref|YP_004262243.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489]
gi|324321907|gb|ADY29372.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489]
Length = 525
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 103/307 (33%), Positives = 152/307 (49%), Gaps = 9/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + I+ + + GD ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSELALYQANRVKSELETL----GFKTKIVAVKSAGDLELDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT ++ ++ GEID AVHS KD+PT L KG+ +A L R +++D + +
Sbjct: 56 TGIFTRTLDIAMLKGEIDIAVHSLKDVPTVLPKGIVQAAVLERGNVKDTLVYKNNEEFLG 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179
I TSSLRRKA L V D RG + TRL KL ++ + + A AGI RL
Sbjct: 116 ARDGV-IATSSLRRKAQWLNRYPTHKVEDIRGNVNTRLQKLEDSETWNGAIFAAAGIGRL 174
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+E +N++ P+PGQGAI + + + + + INH +T ER FL
Sbjct: 175 NL--RPEEAVNLDWMIPAPGQGAIMVTAKEDEEEILAICEEINHRETEICTTIERTFLNR 232
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C + I AY K + F ++L+ DG EV R D N+ +AA+++
Sbjct: 233 LEGGCTAPIGALAYIKSEQVIFRAVLLSPDGTKKIEVDRLVKLGDHNNLAIEAAEHVLER 292
Query: 300 SNKNVFN 306
K +
Sbjct: 293 GGKYIME 299
>gi|282865645|ref|ZP_06274696.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
gi|282559689|gb|EFB65240.1| porphobilinogen deaminase [Streptomyces sp. ACTE]
Length = 328
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 17/315 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP R+GTR S LA+A + ++ +V + ++ ++T GD ++ L +IGG G
Sbjct: 12 TKPLRLGTRRSKLAMAQSGMVADAVREVT---GRAVELVEITTYGD-VSREHLAQIGGTG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + L GE+D AVHS KD+PT +GL ++A RED RDV ++ + L
Sbjct: 68 VFVAALREALARGEVDFAVHSLKDLPTTQPEGLVLAAVPVREDPRDVLVARDGLTFAQLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ IGT S RR A L + D+ + RG ++TR+N + + A++LA AG+ R
Sbjct: 128 SGARIGTGSPRRMAQLNAYARSHGLDMETVAIRGNVDTRINFVRTGELDAVVLAAAGLSR 187
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + + + L+ + P+PGQGA+ IE ++ + + ++ T +V ERA LA
Sbjct: 188 LGRTGEVTDFLSTDTVLPAPGQGALAIECAEDSTELAAALAELDDPHTRVAVTAERALLA 247
Query: 239 ELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIG 289
L+ C + + A G + L G+V ++DG ++S G+ DA G
Sbjct: 248 ALEAGCSAPVGALADLLADGQIVNELRLRGVVGSTDGTSLVQLSITGSVPTSHDDAAAFG 307
Query: 290 RDAAQYIRFISNKNV 304
R+ A + +
Sbjct: 308 RELASEMLAKGAAGL 322
>gi|237736083|ref|ZP_04566564.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817]
gi|229421794|gb|EEO36841.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817]
Length = 299
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 105/301 (34%), Positives = 153/301 (50%), Gaps = 8/301 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIG 59
KK IG+R S LALA + + L P + I + T GD+ N ++
Sbjct: 1 MKKKIVIGSRGSILALAQSEIVKQQLEK--NFPEYEFEIKKIVTSGDKDLVSNWNNSDKS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE +L++ ID AVHS KDMP+ +GL A RED RDV IS ++L
Sbjct: 59 LKSFFTKEIEVELLNETIDLAVHSMKDMPSISPEGLICGAIPDREDQRDVLISKNGKTLM 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L +++GTSSLRR + R D+ + RG I TRLNKL AILLA AG+KR+
Sbjct: 119 ELPKGAIVGTSSLRRTMNIKSLRPDLQIKQLRGNIHTRLNKLKTEDYDAILLAAAGLKRV 178
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I E L+ + F P+P QG + I+ N+ + + ++K I+ ED V ER F
Sbjct: 179 GLENEITEYLDPKIFLPAPAQGVLHIQCRENDEEIKNILKTIHKEDIKKIVVIEREFSKI 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + ++ G + FYG+ + G + S + I + + A I+
Sbjct: 239 FDGGCHTPMGCYSEVNGDKITFYGVYFKDNLG---YTASITEKLSEGIRVAQKLADTIKE 295
Query: 299 I 299
Sbjct: 296 K 296
>gi|305433096|ref|ZP_07402252.1| hydroxymethylbilane synthase [Campylobacter coli JV20]
gi|304443797|gb|EFM36454.1| hydroxymethylbilane synthase [Campylobacter coli JV20]
Length = 308
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL + L H + + TKGD + + L +IGGKG
Sbjct: 1 MKELVIATRKSQLALWQSEFIADFLNKTH---GIAVRLEGFKTKGDVLLDSPLAKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 58 LFTKELEESMLRNEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +
Sbjct: 118 KGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLD 177
Query: 183 KVIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K + + ++ P+ QGA+ IE+ + + +K +N ++ ER F++ L
Sbjct: 178 KQVNFVYTFSKDELIPAASQGALGIESIDDEKFL-KFLKCLNDDNALIETTIEREFISTL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A G + I+ DG + R + D G A+
Sbjct: 237 EGGCQVPIGINAELLGDEICVRAILGLPDGSEILKEKRMIKKSDFKGFGESLAKEFIAKG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKELL 301
>gi|255725590|ref|XP_002547724.1| porphobilinogen deaminase [Candida tropicalis MYA-3404]
gi|240135615|gb|EER35169.1| porphobilinogen deaminase [Candida tropicalis MYA-3404]
Length = 340
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 19/314 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T+E
Sbjct: 16 IGGRKSKLAVVQSELVKKAIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73
Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119
+E L+ ++D VHS KDMPT L + ++ RED RD + +SLK
Sbjct: 74 LEILLLDSIDEYPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAVVMKSGSPYKSLK 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIK 177
DL +++GTSS+RR + L++ + RG I+TRLNKL+ N+ ++LA AG+
Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPDNEYCCLILASAGLI 193
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I ++D + GQGA+ IE + K + +++ I ER+ +
Sbjct: 194 RLGLGDRITSF--LDDMYYAVGQGALGIEIRRGDDKVKPILQKIEDPIATVCCLAERSLM 251
Query: 238 AELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292
L+G C + + T L GI+++ DG ++ E D +G +
Sbjct: 252 RYLEGGCSVPLGVNSNYNEDTQELTLKGIIVSPDGSVWIEDEVVKTINCNEDCEQVGIEL 311
Query: 293 AQYIRFISNKNVFN 306
++ K + +
Sbjct: 312 GDKLKAKGAKEILD 325
>gi|225025796|ref|ZP_03714988.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353]
gi|224956880|gb|EEG38089.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353]
Length = 844
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 104/289 (35%), Positives = 159/289 (55%), Gaps = 6/289 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +IGTR S LAL + + P + I+ + TKGD+I +++LT GGK
Sbjct: 1 MKNIIKIGTRKSKLALIQTDIVKDKIKKA--FPEIEVEIVKIDTKGDQILDKSLTSFGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT E+E +L+SG +D AVHSAKDMP +GL I A L R D+RD F++ T + L++L
Sbjct: 59 GVFTAELEAELLSGAVDIAVHSAKDMPMDFPEGLGIGAVLDRADVRDTFVTTTGKKLEEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S++GTSSLRR+ L+ +++ RG ++TRL+KL + + I+LA AGI+RL
Sbjct: 119 EPGSIVGTSSLRRELLIKEINPYVTIKLLRGNVQTRLSKLRDGQYDGIILAAAGIERLGY 178
Query: 182 EKV---IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
EK + L+ + F P+ GQG + +E+ V + + E++ I+ E + ERAFL
Sbjct: 179 EKEEGLHYQYLDPDVFLPAAGQGILAVESRVEDAEMAEILAAIHSEKAECLLMAERAFLK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
+ GSC + A + + + DG + N DAI
Sbjct: 239 TIGGSCNAPAAALCREENGEFSMRAMYVK-DGIHSRKTYMTVNIEDAIA 286
>gi|57238255|ref|YP_178664.1| porphobilinogen deaminase [Campylobacter jejuni RM1221]
gi|121612975|ref|YP_001000245.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|148925915|ref|ZP_01809602.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|167005201|ref|ZP_02270959.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|205355401|ref|ZP_03222172.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|81557551|sp|Q5HVM1|HEM3_CAMJR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513884|sp|A1VYQ4|HEM3_CAMJJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|57167059|gb|AAW35838.1| porphobilinogen deaminase [Campylobacter jejuni RM1221]
gi|87250005|gb|EAQ72963.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81-176]
gi|145844901|gb|EDK22005.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205346635|gb|EDZ33267.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|284925807|gb|ADC28159.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315057963|gb|ADT72292.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni S3]
Length = 307
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178
Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|86148990|ref|ZP_01067222.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|86153229|ref|ZP_01071433.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88597145|ref|ZP_01100381.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562197|ref|YP_002343976.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|12643831|sp|Q9PHW9|HEM3_CAMJE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85840348|gb|EAQ57605.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85842955|gb|EAQ60166.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88190834|gb|EAQ94807.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359903|emb|CAL34691.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|315927042|gb|EFV06397.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315928698|gb|EFV07978.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 305]
Length = 307
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178
Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|157414826|ref|YP_001482082.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81116]
gi|172047086|sp|A8FKW8|HEM3_CAMJ8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157385790|gb|ABV52105.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
81116]
gi|307747464|gb|ADN90734.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni M1]
gi|315931740|gb|EFV10695.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 327]
Length = 307
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPRGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178
Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|41056087|ref|NP_957448.1| hydroxymethylbilane synthase a [Danio rerio]
gi|31419559|gb|AAH53268.1| Hydroxymethylbilane synthase a [Danio rerio]
Length = 358
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 111/334 (33%), Positives = 159/334 (47%), Gaps = 34/334 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA +L ++ P + I+ +ST GD+I + L++IG K L
Sbjct: 17 RVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVRLEIVAMSTIGDKILDTALSKIGEKSL 74
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L
Sbjct: 75 FTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDS 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SVIGTSSLRR A L + + + RG + TRL KL+ + AI+LA AG+KR+
Sbjct: 135 LPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRM 194
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL +
Sbjct: 195 GWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQ 254
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--------------------- 278
L+G C +A KGS LY G V + DG + +
Sbjct: 255 LEGGCSVPVAVHTEVKGSMLYLTGAVYSLDGADCLKDTMQTCVELDNKVNESTQRSANVG 314
Query: 279 -------NGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A +G D A + K++
Sbjct: 315 VTACNISSSALEAAEKLGLDLANVLLNKGAKDIL 348
>gi|123210215|emb|CAM15095.1| hydroxymethylbilane synthase [Danio rerio]
Length = 358
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 111/334 (33%), Positives = 160/334 (47%), Gaps = 34/334 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K L
Sbjct: 17 RVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSL 74
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L
Sbjct: 75 FTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDS 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SVIGTSSLRR A L + + + RG + TRL KL+ + AI+LA AG+KR+
Sbjct: 135 LPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRM 194
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL +
Sbjct: 195 GWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQ 254
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--------------------- 278
L+G C +A KGS LY G V + DG + +
Sbjct: 255 LEGGCSVPVAVHTEVKGSMLYLTGAVYSLDGADCLKDTMQTCVELDNKVNESTQRSANVG 314
Query: 279 -------NGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A +G D A + K++
Sbjct: 315 VTACNISSSALEAAEKLGLDLANVLLNKGAKDIL 348
>gi|329764682|ref|ZP_08256278.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138828|gb|EGG43068.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 308
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 161/301 (53%), Gaps = 5/301 (1%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S L+LA S L + P + I + TKGD R L I KG+F +E
Sbjct: 2 IGARGSQLSLAQTKLVISELKKIT--PDVDFEIKSIKTKGDTD-ARPLFTIDQKGIFEKE 58
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
I++ + GE+D AVHS KD+P++L++ L +++ RE + D+FIS +L + +VI
Sbjct: 59 IDRAVADGEVDFAVHSLKDVPSQLVENLTLASIPKREMVNDIFISSDGTTLDSIKSGAVI 118
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR + R RSD++V RG IETR+ K+ + I+LA AGI RL + V
Sbjct: 119 GTSSLRRAVQITRKRSDVTVRPIRGNIETRIKKVTDKIFDGIVLAQAGISRLGID-VQYT 177
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+I+DF PSPGQGA+ I + + ++K I D+ + ER+ +D C+
Sbjct: 178 PLSIQDFSPSPGQGALAIVSRKDESSTISMLKKIEDTDSRLEIEAERSLSDFVDSGCRFP 237
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV-FN 306
I +A G+ + + DGK V ++G++ D ++G+ + + ++ N
Sbjct: 238 IGAYAKSNGNQMTLSVSAFSVDGKKSLFVEKSGDKNDPFSLGKSVGEELHKKGVNDLAIN 297
Query: 307 F 307
+
Sbjct: 298 W 298
>gi|114797250|ref|YP_761901.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444]
gi|123128354|sp|Q0BX92|HEM3_HYPNA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114737424|gb|ABI75549.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444]
Length = 321
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 116/307 (37%), Positives = 168/307 (54%), Gaps = 8/307 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K R+GTR SPLALA A + + ++ I+ +T GD++T L GGKGL
Sbjct: 11 KRLRLGTRGSPLALAQAHQIADGIRAASAG-AYDCEIVAFTTTGDKLTTERLINSGGKGL 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L GE+D AVHS KD+P+ L G +A+ RED RD F+SH A+S++DL
Sbjct: 70 FTRELDDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPE 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT+SLRR+A L R D+ V+ FRG + TR+ KL A A LA AG+ RL +
Sbjct: 130 GATLGTASLRREAQALALRPDLKVVTFRGNVATRMRKLEEGLADATFLAMAGLTRLGLSE 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + +ED P+ GQG I + T + + E++ ++HE + + ERAFL +LDG
Sbjct: 190 VAT-PIPLEDMLPAAGQGIIGVVTRDDVDTELLEILGQLSHEPSRVAAIAERAFLEKLDG 248
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--NGNRCDA--INIGRDAAQYIRF 298
SC++ IA + +G G VL+ G + DA + +GR AQ I F
Sbjct: 249 SCRTPIAAHLFDRGDEWQLIGEVLSPGGTTRWRGDGVCRKDATDAQLVLLGRAVAQEIIF 308
Query: 299 ISNKNVF 305
+ K
Sbjct: 309 -AAKEAL 314
>gi|294496111|ref|YP_003542604.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219]
gi|292667110|gb|ADE36959.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219]
Length = 308
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 8/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LALA A L+D P + T GD T+R L E+ G G F
Sbjct: 1 MIIGTRGSDLALAQAKTV-EGLLDSRGFPTTR---KIIKTSGDTFTDRPLHEVEGVGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ +++SGEID AVHS KD+PT+ L I+A + R+ D+ +++ +L +L +
Sbjct: 57 RELDDRMLSGEIDIAVHSMKDLPTERPAELSIAAVIERDSPHDLLLTNDGSTLDELPEGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT+S+RR+A LR+R D+ V D RG I TRL KL + AI+LA AG++R+ +
Sbjct: 117 IVGTTSMRRRAQFLRYRPDLDVQDLRGNINTRLKKLESGMYDAIILAEAGLQRMGWDIE- 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ ++F PS QG I + T +A+ L I+H ++ + ER + +++G C
Sbjct: 176 CHRLDGDNFCPSANQGTIAVVTLAGG-EAELLCSQIDHTESRIATEVERLVIRDVEGGCI 234
Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ FA G+ ++ +L+ DGK + + + + + K
Sbjct: 235 VPVGSFAEFVDNGNKIHIRAEILSLDGKRDIRLDEIIPVDNYREHAEKLGKKLVAMGGKE 294
Query: 304 V 304
+
Sbjct: 295 L 295
>gi|86151766|ref|ZP_01069980.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124067|ref|YP_004066071.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841395|gb|EAQ58643.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017789|gb|ADT65882.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 307
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178
Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + ++ P+ QGA+ IE +N+ K EL++ +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLECLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|68171155|ref|ZP_00544563.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657743|ref|YP_507506.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas]
gi|123722778|sp|Q2GGC7|HEM3_EHRCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|67999425|gb|EAM86066.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599200|gb|ABD44669.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas]
Length = 298
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 5/292 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+A E ++ L P ++ I+ + T GD L+ IGGK LF
Sbjct: 3 IRIGTRGSILAIAQTLEIKNLL--NRYFPEISVQIVKIKTSGDINNQVPLSAIGGKSLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G++D AVHS KD+P +GL I L R DVFIS + +K L L++
Sbjct: 61 KEIEEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RRK L R D+ V+ RG I+TR+ K N + I+LA AG+ R+ + VI
Sbjct: 121 TIGTSSVRRKVQLNYLRPDLQVVPVRGNIDTRILKANVGEFDGIVLAEAGLIRINRCDVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KEIL+ + + GQGAI I+ V++ +KV+N ++ V ER+FL ++GSC
Sbjct: 181 KEILSPKIMLSAVGQGAIGIQCRVDDHSIINKIKVLNCHQSYVCVMAERSFLKTINGSCD 240
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +A A Y T++ ++ K S N CDA G + + +
Sbjct: 241 TPLAALAQYVNNDTIHMSCMLANE--KNMVFASCCFNECDAEKSGINMGKKL 290
>gi|119490987|ref|XP_001263154.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL
181]
gi|119411314|gb|EAW21257.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL
181]
Length = 331
Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 153/313 (48%), Gaps = 13/313 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+A A R SL + +P + I L T GDR L G K L+
Sbjct: 11 PLRIGTRRSNLAMAQAEGIRDSLQKI--VPDRSYEIEALRTLGDRDQLTALYSFGAKSLW 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL SGE+D VH KDMPTKL +++A PR+D RD I SLK L
Sbjct: 69 TTELEEKLTSGELDVIVHCLKDMPTKLPDTCELAAIPPRDDPRDALIVKAGLPYTSLKSL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179
+V+GTSS+RR A L R + + RG +ETRL K+++ + ++++ AG++R+
Sbjct: 129 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDSEYTCMVMSAAGLERV 188
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + L D + GQGA+ +E + K QEL+ + + + + ER+ +
Sbjct: 189 GLKHRISQYLGSRDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQKSTLACLAERSLM 248
Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAA 293
L+G C I L IV++ DG E S +A +G + A
Sbjct: 249 RTLEGGCSVPIGVETEWMPSGDLRMNAIVVSLDGTRSVEDSITSRVEVVDEADALGEELA 308
Query: 294 QYIRFISNKNVFN 306
+ + N
Sbjct: 309 GRLVKAGAGKILN 321
>gi|57167590|ref|ZP_00366730.1| porphobilinogen deaminase [Campylobacter coli RM2228]
gi|57020712|gb|EAL57376.1| porphobilinogen deaminase [Campylobacter coli RM2228]
Length = 308
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 6/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K I TR S LAL + L + H+ +++ TKGD + + L +IGGKG
Sbjct: 1 MKELVIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 58 LFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +
Sbjct: 118 KGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLD 177
Query: 183 KVIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K + + ++ P+ QGA+ IE +++ + E +K +N ++ ER F++ L
Sbjct: 178 KQVNFVYTFSKDELIPAASQGALGIE-SIDDEQILEFLKCLNDDNALIETTIEREFISTL 236
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C+ I A + I+ DG + R + + G A+
Sbjct: 237 EGGCQVPIGINAELLNDEICVRAILGLPDGSEILKEKRMIKKSEFKGFGESLAKEFIAKG 296
Query: 301 NKNVF 305
K +
Sbjct: 297 AKEIL 301
>gi|158320361|ref|YP_001512868.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs]
gi|167008809|sp|A8MGE4|HEM3_ALKOO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158140560|gb|ABW18872.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs]
Length = 296
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 144/293 (49%), Gaps = 7/293 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+G+R S LA+ + ++ P I ++ + T GD ++TL +IGGKGLF
Sbjct: 2 KIRVGSRESKLAVKQSEIVIEAIRKY--DPNIEIELVTMKTTGDIKLDQTLDKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+++ L +D VHS KDMP + + L I A RED RDV + +++K+
Sbjct: 60 IKELDQALYDDRVDITVHSFKDMPMAIDEYLPIVAVSKREDPRDVLVLP--KTVKEPDFS 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG SS RRK L SV RG + TRL KL+ + AI LA AG+KRL E+
Sbjct: 118 KPIGCSSFRRKIQLQEIYPHCSVEPIRGNVLTRLEKLDRGEFSAITLALAGLKRLGLEER 177
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I I + + P+ QG I ++ + + ++ WD ER+F+ L+G C
Sbjct: 178 ISRIFEVTEILPAACQGVIVVQARKGFD--VSFLSDFHDKEAWDISMAERSFVRTLNGGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S +A + K + L G+ + S H+ + G R +G + A ++
Sbjct: 236 SSPVAAYGEIKDNYLTLTGLYVDSSNS-VHKKTITGARKQGEEMGFNLALQMK 287
>gi|209155902|gb|ACI34183.1| Porphobilinogen deaminase [Salmo salar]
Length = 358
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 107/334 (32%), Positives = 151/334 (45%), Gaps = 33/334 (9%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K
Sbjct: 17 NRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE D + H +L
Sbjct: 75 LFTKELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLD 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178
L SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG+KR
Sbjct: 135 TLPDGSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKR 194
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E + ++L ED + GQGA+ +E + E+V ++H +T ERAFL
Sbjct: 195 MGWEARVSQVLGPEDCMYAVGQGALAVEVRARDCDILEMVSTLHHSETVLRCIAERAFLR 254
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--------------- 283
L+G C +A K S L G V + DG + + N
Sbjct: 255 RLEGGCSVPVAVNTEVKDSVLSLTGAVYSLDGADSLKEAMETNVDPGNKLESAADIQHVG 314
Query: 284 ------------DAINIGRDAAQYIRFISNKNVF 305
A +G D A + +
Sbjct: 315 VTAHNVPQCAQVAAEKLGVDLADLLLSKGAMEIL 348
>gi|283955967|ref|ZP_06373457.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792627|gb|EFC31406.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336]
Length = 307
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT+SLRRK +L R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQILLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQ 178
Query: 185 IK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYGFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG+ + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGREILKDKRMIKKDDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|307728969|ref|YP_003906193.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003]
gi|307583504|gb|ADN56902.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003]
Length = 307
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 99/291 (34%), Positives = 155/291 (53%), Gaps = 5/291 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A + +L ++ P + I+ ++T+GD+I +RTL+++GGKGLF +E+E L G
Sbjct: 1 MWQAEHVQCALHKLY--PSCEVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P +L G +S + RED RD +S+ SL L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMELPPGFALSTIMEREDPRDALVSNHYDSLAALPAGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L + V RG ++TRL KL+ AI+LA AG+KRL I+ +L+ +D P
Sbjct: 119 MLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDRIRALLDPQDSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + ++HE T +V ER L GSC+ +A +A
Sbjct: 179 AAGQGALGIEIRADRADLAAWLTPLHHEHTAAAVEAERMVSRALGGSCEVPLAAYAEWHD 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISNKNV 304
L+ G+V DG+ + A+ +GR+ A + +
Sbjct: 239 GALHLRGVVATPDGRRVLSAQASAPAPTVERAVALGREVANALEQQGAMEI 289
>gi|159036094|ref|YP_001535347.1| porphobilinogen deaminase [Salinispora arenicola CNS-205]
gi|157914929|gb|ABV96356.1| porphobilinogen deaminase [Salinispora arenicola CNS-205]
Length = 322
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 11/307 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + +L P + ++ + T GDR + + +G G+F
Sbjct: 4 PLRLGTRGSALAMAQSGQVAQALTAATGNP---VELVEVVTAGDR-SAAPVHRLG-VGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L + ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L
Sbjct: 59 VSALRDALTARTIDFAVHSFKDLPTAAAPGLHVAAVPPRQDPRDALVARAGRTLAELPPG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182
+ +GT +LRR A L + V RG + TRL ++ A++LA AG+ RL +
Sbjct: 119 ARVGTGALRRIAQLHALGLQLDVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLDRT 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L+
Sbjct: 179 DTITETLDPMLMLPAPAQGALAVECRSDDSDLVELLAVLDHAPSRATVVAERALLATLEA 238
Query: 243 SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + +A +A G +Y G V++ DG +SR G DA+ IG+ A +
Sbjct: 239 GCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGKALAADLLE 298
Query: 299 ISNKNVF 305
+ ++
Sbjct: 299 LGADSIL 305
>gi|317012081|gb|ADU82689.1| porphobilinogen deaminase [Helicobacter pylori Lithuania75]
Length = 306
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 98/303 (32%), Positives = 151/303 (49%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 120 AKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E N K ++ +N + ER F+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDAKSAFCCRLEREFIKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ ++ + K
Sbjct: 239 CQIPIGVHASLVGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|313901685|ref|ZP_07835116.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965]
gi|313468036|gb|EFR63519.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965]
Length = 362
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 104/326 (31%), Positives = 161/326 (49%), Gaps = 23/326 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LA A L H P + ++P++T GDR +R L +
Sbjct: 1 MTAAVLRIGTRASALARIQAQWVARQLETHH--PGLRVELVPVTTLGDRNRSRPLYALSS 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119
G F +E+E+ L+ G ID AVHSAKD+PT+L +GL+++A+ RED D + + +
Sbjct: 59 PGAFVKELEEALLEGRIDLAVHSAKDVPTRLPEGLELAAFPQREDPADALVIPRPATGRL 118
Query: 120 --------------------DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
L + +GTSSLRR+A L R D++V RG ++TRL
Sbjct: 119 SVRGPGGEEPPGSEARDLLAALPPGARVGTSSLRRQAWLRARRPDLAVEPARGNLDTRLR 178
Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
+L+ A+LLA AG++RL I ++ + P+PGQGA+ +E + + V+
Sbjct: 179 RLDEGHWDALLLAAAGLRRLGFAGRISALVPPLELLPAPGQGALAVEIRAGDEAVRRRVQ 238
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
V++ + +V ERAFLAEL G+C+ + +A +G + G+V G +
Sbjct: 239 VLDRPEVSRAVRAERAFLAELGGTCRVPLGAWARVQGGRIVIDGMVAGPAGSPWLSGRGE 298
Query: 280 GNRCDAINIGRDAAQYIRFISNKNVF 305
G+ D GR A+ + V
Sbjct: 299 GSLSDPEGTGRRLAEQLLAKGAAGVL 324
>gi|170691941|ref|ZP_02883105.1| porphobilinogen deaminase [Burkholderia graminis C4D1M]
gi|170143225|gb|EDT11389.1| porphobilinogen deaminase [Burkholderia graminis C4D1M]
Length = 318
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 104/291 (35%), Positives = 159/291 (54%), Gaps = 5/291 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G
Sbjct: 1 MWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P +L G +S + RED RD +S+ SL L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L + V RG ++TRL KL+ AI+LA AG+KRL E I+ +L+ ED P
Sbjct: 119 MLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEGRIRALLDPEDSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + + ++HE T +V ER L GSC+ +A +A
Sbjct: 179 AAGQGALGIEIRSDRAELAAWLAPLHHEHTAAAVEAERMVSRVLGGSCEVPLAAYATWHD 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNV 304
L+ GIV DG+ + AI +GR+ A + ++
Sbjct: 239 GALHLRGIVATPDGQRVLSAQASAPAPTTERAIALGREVANALEQQGAMDI 289
>gi|328883227|emb|CCA56466.1| Porphobilinogen deaminase [Streptomyces venezuelae ATCC 10712]
Length = 328
Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 26/326 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + ++ + P + ++ ++T GD L +IGG
Sbjct: 1 MTERALRLGTRRSKLAMAQSGHVADAVRRLTGRP---VELVEITTYGDTSR-EHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L++ E+D AVHS KD+PT L ++A RED RDV I+ +L
Sbjct: 57 TGVFVAALRDALLADEVDFAVHSLKDLPTAQHPDLVLAAIPEREDPRDVLIARDGLTLDR 116
Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L + DI+ + RG ++TR+ + + A++LA AG+
Sbjct: 117 LPEGARVGTGSPRRMAQLHAYARNHGLDITCVPIRGNVDTRVGYVRKGELDAVVLAAAGL 176
Query: 177 KRLKKEKV-----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
R+ E L ++ P+PGQGA+ +E +N + + ++ T +V
Sbjct: 177 NRIGGTDELLGGLSAEPLPVDTVLPAPGQGALAVECLASNTELVAALAPLDDPLTRAAVT 236
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNR 282
ER+ LA L+ C + + A + G+V +DG ++S G
Sbjct: 237 AERSLLAALEAGCSAPVGALADLLADDPGHGQVVTEMRLRGVVGTTDGSTLVQLSTTGPV 296
Query: 283 ----CDAINIGRDAAQYIRFISNKNV 304
+A+ +GR+ A + +
Sbjct: 297 PTSHDEAMALGRELADEMLAKGAAGL 322
>gi|317180043|dbj|BAJ57829.1| porphobilinogen deaminase [Helicobacter pylori F32]
Length = 306
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N K ++ +N E++ + ERAF+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLERAFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|148554852|ref|YP_001262434.1| porphobilinogen deaminase [Sphingomonas wittichii RW1]
gi|148500042|gb|ABQ68296.1| porphobilinogen deaminase [Sphingomonas wittichii RW1]
Length = 308
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 110/290 (37%), Positives = 153/290 (52%), Gaps = 4/290 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+GTR SPLAL A ++L H + I+ + T GDRI +R L E+GGK L
Sbjct: 7 RPLRLGTRGSPLALTQARMVIAALRAAHGWDETAVEIVAIKTSGDRIQDRALAEVGGKAL 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+T+E++ L G ID AVHS KD+ T + I+A LPR D+RD I A SL L
Sbjct: 67 WTKELDIALADGTIDFAVHSMKDVETIRPAAIVIAAMLPRADVRDRLI--GAASLAALPQ 124
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS RR A + R R D+ ++ FRG ++TRL KL +A A LLA AG+ RL ++
Sbjct: 125 GARVGTSSPRRSAQVRRARPDVGIVLFRGNVDTRLGKLAAGEAEATLLAGAGLIRLGRD- 183
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I + IE+ P+P Q A+ IET + L+ I+ T SV+ ERA LA L
Sbjct: 184 EIGHPIPIEEMLPAPAQAAVGIETLAERTDVRALLGAIDDAPTNASVSAERALLAALGAD 243
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-RNGNRCDAINIGRDA 292
C+S +A A G+ L ++ DG DA +
Sbjct: 244 CRSPVAALAVRSGAGLLLRAEIMTEDGSEHRSGEAMLFETGDAAALAHRL 293
>gi|217033471|ref|ZP_03438901.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10]
gi|216944176|gb|EEC23604.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10]
Length = 306
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFTTLQKLNDEESAFCCHLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|317181546|dbj|BAJ59330.1| porphobilinogen deaminase [Helicobacter pylori F57]
Length = 306
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 157/305 (51%), Gaps = 5/305 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IG+R S LAL A + L I + TKGD+I + L +IGGKG
Sbjct: 1 MKKLVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDAPLNKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 58 LFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLP 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 118 KGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQ 177
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ ++E+ PS GQGA+ +E + K ++ +N E++ + ERAF+ L+
Sbjct: 178 GAKYRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLERAFVKGLN 236
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C+ I A G + ++ +GK + G++ A+++ ++ +
Sbjct: 237 GGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGA 296
Query: 302 KNVFN 306
K +
Sbjct: 297 KEILE 301
>gi|254382514|ref|ZP_04997873.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1]
gi|194341418|gb|EDX22384.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1]
Length = 322
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 90/320 (28%), Positives = 156/320 (48%), Gaps = 20/320 (6%)
Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M + P R+GTR S LA++ + ++ + P + ++ ++T GD ++ L +
Sbjct: 1 MNPRLDQPLRLGTRRSKLAMSQSGHVADAVRAITGRP---VELVEITTYGD-VSREHLAQ 56
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IGG G+F + L+ GEID AVHS KD+PT L I+A PRED RD ++ +
Sbjct: 57 IGGTGVFVTALRDALLRGEIDFAVHSLKDLPTTQPDDLVIAAMPPREDPRDALVARDGLT 116
Query: 118 LKDLALHSVIGTSSLRRKALLLR----WRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
+ L + +GT S RR A L I + RG ++TR+ + N + A++LA
Sbjct: 117 FEQLPDGARVGTGSPRRMAQLNHAARALGKRIETVAIRGNVDTRIGFVRNGELDAVVLAA 176
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ + + L+++ P+PGQGA+ +E ++ + + ++ T +V E
Sbjct: 177 AGLNRIGRSDEATDFLSVDSVLPAPGQGALAVECLASDAELIAALAELDDPHTRAAVTAE 236
Query: 234 RAFLAELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CD 284
R+ LA L+ C + + A G + + G+V DG ++S G D
Sbjct: 237 RSLLAALEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGTTLVQLSTTGPVPQSYDD 296
Query: 285 AINIGRDAAQYIRFISNKNV 304
A+ +GR+ A + +
Sbjct: 297 AMALGRELADEMLAKGAAGL 316
>gi|283954165|ref|ZP_06371690.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414]
gi|283794444|gb|EFC33188.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414]
Length = 307
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEYIAQILKKTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESILRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSKNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+SLRRK LL R D+ +I RG + +R+ KL N + AI+LA AGIKRL +K
Sbjct: 119 ARVGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGEFDAIILAMAGIKRLSLDKQ 178
Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMICKSDFKGFGESLAKEFIAKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|300774730|ref|ZP_07084593.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910]
gi|300506545|gb|EFK37680.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910]
Length = 302
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 8/302 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LAL A E L + + + I+P+ + GD+ N+ L +G G
Sbjct: 1 MKSIRIGTRNSALALWQAREVARHLQNNNYL----TEIVPIVSSGDKNLNQPLYSLGITG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT +++ L++ EID AVHS KD+PT+L + +++ AYL R+ +D+ I + K+
Sbjct: 57 VFTRDLDIALLNDEIDIAVHSLKDVPTQLPQNIEMIAYLERDYPQDILIRKESSRNKEF- 115
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ TSSLRR+A LR D RG I+TRL KL A +L+ AGIKR+K E
Sbjct: 116 HELKLATSSLRRRAFWLRNYPTAEFSDIRGNIQTRLQKLEEGDFDATILSLAGIKRMKME 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +P QG I + H + P+ E+V+ INH++T V ER FL+ L+G
Sbjct: 176 IDYEM---LPLMISAPSQGVISVAGHTDKPEINEIVRQINHQETQICVEIERNFLSTLEG 232
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + I FA G + F + + DGK V N A N G A+ + K
Sbjct: 233 GCTAPIGAFAEIIGDQIRFKAALCSLDGKNCIAVDENFVYTPAENFGEKYAKVVLENGGK 292
Query: 303 NV 304
+
Sbjct: 293 EL 294
>gi|302543510|ref|ZP_07295852.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC
53653]
gi|302461128|gb|EFL24221.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC
53653]
Length = 322
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + ++ ++ P + ++ ++T GD + L +IGG G+F
Sbjct: 8 PLRLGTRRSALAMAQSGLIADAVRELTGRP---VELVEITTYGDVSREQ-LAQIGGTGVF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+SGEID AVHS KD+PT +GL ++A RED RD I+ + + L
Sbjct: 64 VSALREALLSGEIDFAVHSLKDLPTAEPEGLTLAAIPRREDPRDALIARDGLTFEQLPPG 123
Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR A L W D+ + RG + TR+ + + + A++LA AG+ RL
Sbjct: 124 ARIGTGSPRRAAQLNAWARSVGLDVETVPIRGNVGTRIGYVRSGELDAVVLAAAGLSRLG 183
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ EIL+ + P+PGQGA+ +E ++ + L+ ++ T +V ER+ LA L
Sbjct: 184 RIGEATEILDADHVLPAPGQGALAVECAADDAELTALLAGLDDPHTRAAVTAERSLLAAL 243
Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291
+ C + + A G + G+V +DG ++S G A ++GR+
Sbjct: 244 EAGCSAPVGALADLLGDGQVVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPDQAADLGRE 303
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 304 LAAEMLAKGAAGL 316
>gi|163754811|ref|ZP_02161933.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1]
gi|161325752|gb|EDP97079.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1]
Length = 526
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 9/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K+ RIGTR S LAL A + L H ++P+ GD + ++ L E+G
Sbjct: 1 MSKR-IRIGTRDSELALWQAKVVQEQLE----FLGHKTELVPVKATGDLVLDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT ++ +++ +ID AVHS KD+PT L KG+ +A L R ++RD + +
Sbjct: 56 TGIFTRTLDIAMLNNDIDIAVHSLKDVPTILPKGIVQAAVLKRGNVRDTLVFKNNEEFLS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179
++VI T SLRRKA L ++ D RG + TRL KL + + + A AG+ R+
Sbjct: 116 QR-NAVIATGSLRRKAQWLHRYPTHTIEDLRGNVNTRLQKLADTEHWNGAIFAAAGLGRI 174
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+E +N+E P+P QGAI I + + + + INHE+T + ER FL
Sbjct: 175 GL--RPEESVNLEWMIPAPAQGAIMITALEADEEIRAICAEINHEETEICTSIERKFLNL 232
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C + I AY K + G++L++DG V+R + ++ + YI
Sbjct: 233 LEGGCTAPIGAIAYIKDEVVTLEGVLLSTDGTKRIYVTRYEKLGEHHDLAEYCSNYIIER 292
Query: 300 SNKNVFN 306
K + +
Sbjct: 293 GGKRLMD 299
>gi|308061591|gb|ADO03479.1| porphobilinogen deaminase [Helicobacter pylori Cuz20]
Length = 306
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E + K ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|238563412|ref|ZP_00438929.2| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4]
gi|238520765|gb|EEP84222.1| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4]
Length = 393
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 77 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 134
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 135 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 194
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 195 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 254
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 255 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 314
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 315 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 374
Query: 302 KNVFN 306
+ + +
Sbjct: 375 RAIVD 379
>gi|326336014|ref|ZP_08202190.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691811|gb|EGD33774.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 308
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 7/303 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK RIGTR S LAL A + +S L + + ++P+ ++GD + L +G
Sbjct: 1 MKKTLRIGTRDSELALWQARKVQSLLEAL----GYPTTLVPVKSQGDLTLDIPLYTMGIT 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV +
Sbjct: 57 GVFTKVLDVAMLQGVIDIAVHSMKDVPTTLPKGIIKGAILKRANVQDVLVYKENLDFLSH 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ I T SLRRKA LR V + RG I TRL KL+ + + A A ++RL
Sbjct: 117 TH-ATIATGSLRRKAQWLRRFPTHLVENLRGNINTRLEKLHKSPWQGAIFAAAALERL-- 173
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+K ++ P+P QGAI + + + +E + +IN + T N ER FL L+
Sbjct: 174 DKKEVNAFPLDWMTPAPAQGAIMVVSKAEDTYTKEALALINDQPTDIETNIERRFLKRLE 233
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
G C + I A G T+ F G + + DGK EV + + D N A I
Sbjct: 234 GGCTAPIGAKATLDGKTISFVGNLFSLDGKHAIEVKKTISLDDIENFPEACADEILLKGG 293
Query: 302 KNV 304
++
Sbjct: 294 ADL 296
>gi|260654411|ref|ZP_05859901.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1]
gi|260631044|gb|EEX49238.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1]
Length = 714
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 9/297 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+P R+ +R S LA+A + L + ++ IIP T+GD + +R L GGKGL
Sbjct: 424 RPLRLASRESELAMAQSRLVAERLHEATGF---DVEIIPFRTRGDAVADRRLESAGGKGL 480
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F +E+E+ ++SG+ D AVHS KDMP+ GL +A + R+ D + +
Sbjct: 481 FVKELERAILSGQADLAVHSLKDMPSSCPDGLAFAALMDRQTAFDCLVLRPGLT----GR 536
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
IGTSS RR A SD + RG + TRL+KL+ + A++LA AG++RL ++
Sbjct: 537 PVRIGTSSARRIAQGRALFSDAQFVPLRGNLRTRLSKLDGGEFDALILAEAGLRRLGLQE 596
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + + + PS GQG + ++ + P +LV ++ ERAF+ L+G
Sbjct: 597 RVSRVFSADQMIPSAGQGTLAVQCPFDGP-VFDLVSQLDEPAVRTCCLAERAFIDRLNGG 655
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C + +A G T+ G+ + DGK +G D ++ + A ++
Sbjct: 656 CTAPHGAYARVDGETIEMIGLYVRPDGKT-LSGKISGPAADGPSLAAELADRLKRRG 711
>gi|188527044|ref|YP_001909731.1| porphobilinogen deaminase [Helicobacter pylori Shi470]
gi|238058919|sp|B2US69|HEM3_HELPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188143284|gb|ACD47701.1| porphobilinogen deaminase [Helicobacter pylori Shi470]
Length = 306
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E + K ++ +N E++ + ERAF+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLERAFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK R G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKERQGDKTKAFDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|19703980|ref|NP_603542.1| porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|25453023|sp|Q8RFP5|HEM3_FUSNN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|19714161|gb|AAL94841.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 298
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 107/300 (35%), Positives = 144/300 (48%), Gaps = 7/300 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P + I + T GD+ ++I
Sbjct: 1 MKKNIIIGSRGSILALAQANLVKDRLQ--GNYPNLSFEIKEIVTSGDKDLKSNWENSDIS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ GEID AVHS KDMP K L A RED RDV +S +
Sbjct: 59 LKSFFTKEIEQELLDGEIDIAVHSMKDMPAVSAKSLICGAIPDREDPRDVLVSKNGLLVT 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 119 -LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F + L GK + I AA+ I+
Sbjct: 238 FDGGCHTPMGCYSQVNGDKIKFTAVYLDE-GKQ-IRAVVEDDLAKGKEIAYMAAEEIKNK 295
>gi|256380712|ref|YP_003104372.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827]
gi|255925015|gb|ACU40526.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827]
Length = 313
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 17/310 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIGTR S LALA +L + I+ +ST GDR ++ + EIG
Sbjct: 1 MNRTLRIGTRGSALALAQTGTVAEALRAA----GAQVEIVTVSTPGDR-SHAPIAEIGI- 54
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L
Sbjct: 55 GVFTSALRDALAHGEVDVAVHSYKDLPTAPDTRLSLAAIPQREDPRDALVARDGLTLGEL 114
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S +GT S RR L + ++ RG I++R+ ++ + + A++LA AGI RL +
Sbjct: 115 PPGSKVGTGSPRRATQLAALGLGLEILPIRGNIDSRMARVFDGELDAVVLARAGISRLGR 174
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I E+L+ P+P QGA+ IE + L ++ + +V ERA LA L
Sbjct: 175 VENITEVLDPIQMLPAPAQGALAIECRVDDVDTEHLLRSTLDDSASRAAVTAERAMLAAL 234
Query: 241 DGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
+ C + + A + G+V A DG S G+ A +GR
Sbjct: 235 EAGCSAPVGALADVVEDLDDEGAAVLRISLRGVVAAEDGD-LLRASATGDLTAAEELGRA 293
Query: 292 AAQYIRFISN 301
A + +S
Sbjct: 294 LAAELLDLSG 303
>gi|224372609|ref|YP_002606981.1| porphobilinogen deaminase [Nautilia profundicola AmH]
gi|223588468|gb|ACM92204.1| porphobilinogen deaminase [Nautilia profundicola AmH]
Length = 291
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 11/296 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL A +S L + H I + ++T GD+I ++ L EIGGKGLF
Sbjct: 2 KLTIATRGSKLALWQAEWVKSKLEKL----GHEIDLKIVTTTGDKILDKPLAEIGGKGLF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLL-KGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E+E+ L+ G+ AVHS KD PT+ ++A RE + DVF+S ++L +L
Sbjct: 58 IKEVEEALLKGDAQIAVHSLKDFPTQYETDHFTLAAIPVREAVEDVFLSENFETLAELPH 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--K 181
++V+GTSS+RR L +R D+ + D RG ++TR+NKL + K AI+LA+AG+KRL K
Sbjct: 118 NAVVGTSSIRRAMQLKAFRDDLVITDLRGNVDTRINKLKDGKYDAIILAHAGVKRLGLLK 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E+L+ + P+ GQGA+ IET N+PK E VK +N T V ER F+ L+
Sbjct: 178 SVKYFEVLDTDIMIPAMGQGALGIETI-NDPKVIEAVKPLNDFRTQICVTIERDFVDTLN 236
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + + +A ++ +L D + + + N G++ A+
Sbjct: 237 LGCHAPVGVYAKIMADDSIKIKAALLKDD--KMIKKEVVISFDEWENAGKEFAKEF 290
>gi|25026992|ref|NP_737046.1| porphobilinogen deaminase [Corynebacterium efficiens YS-314]
gi|259508525|ref|ZP_05751425.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314]
gi|39931582|sp|Q8FSF7|HEM3_COREF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23492272|dbj|BAC17246.1| putative hydroxymethylbilane synthase [Corynebacterium efficiens
YS-314]
gi|259163875|gb|EEW48429.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314]
Length = 299
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 85/304 (27%), Positives = 139/304 (45%), Gaps = 10/304 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R L + + ++T GD + + IG G+F
Sbjct: 2 TLRIGTRGSKLATTQAGHMRDRLKHF----GRDAELTIVTTPGDVNMS-PVERIG-VGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L++ EID AVHS KD+PT + R D RD I+ +L++L
Sbjct: 56 TQALRDALVADEIDVAVHSFKDLPTAPDPRFHL-VVPTRADARDALIARDGLTLEELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKALRPDLEILPLRGNIDTRMGKVTSGELDAVVLAFAGLSRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + + P+P QGA+ IE V + + ++ H DT+ + ER L L+ C
Sbjct: 175 ATQVFDPDMLMPAPAQGALAIECRVEDEDIITGLNMLMHADTYVTAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A G T+ V A DG S G + A +
Sbjct: 235 TAPVAAHATLDGYAGDTMTLTAGVFALDGSEQLVFSAQGAGERPEELAEQVAAQLIEQGA 294
Query: 302 KNVF 305
+
Sbjct: 295 ATLL 298
>gi|296138401|ref|YP_003645644.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162]
gi|296026535|gb|ADG77305.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162]
Length = 318
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 15/310 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A R +L+ H ++ ++T GD ++ + +IG G+F
Sbjct: 14 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIVTTPGDLSSD-PVEKIG-VGVF 67
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T + L +GE+D AVHS KD+PT L ++A PRED RD ++ L +L
Sbjct: 68 TSALRDALANGEVDVAVHSYKDLPTAPDDRLVLAAVPPREDSRDALVARDGMVLGELPAG 127
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSS RR L + + RG +++RL K+ + + AI++A AG+KR+ +
Sbjct: 128 SVVGTSSPRRATQLTALGLGLEIRPLRGNLDSRLRKVADGELDAIVVALAGLKRIGRHDE 187
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E L+ P+P QGA+ +E + Q ++ ++ T +V ERA LAEL+ C
Sbjct: 188 VTEALDPVQMLPAPAQGALAVECRRGDADLQSVLSELDDHWTRAAVTAERALLAELEAGC 247
Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
+ + A L GI LA+DG + S G +A +G A+
Sbjct: 248 TAPVGAIAEVVESLDDDGRIFEELSLRGIALAADGSDSVKASAVGPVGEAGALGTALARE 307
Query: 296 IRFISNKNVF 305
+ + +++
Sbjct: 308 LLDLGARDLL 317
>gi|237744690|ref|ZP_04575171.1| porphobilinogen deaminase [Fusobacterium sp. 7_1]
gi|229431919|gb|EEO42131.1| porphobilinogen deaminase [Fusobacterium sp. 7_1]
Length = 302
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 148/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P I + T GD+ +++
Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDVS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F
Sbjct: 178 GMTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNENIAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F V + +GK + I AA+ I+
Sbjct: 238 FDGGCHTPMGCYSQVNGDKIKFTA-VYSDEGKQ-IRAVVEDDLTKGKEIAYMAAEEIKNK 295
Query: 300 SNKN 303
NK
Sbjct: 296 INKG 299
>gi|119478980|ref|XP_001259519.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL
181]
gi|119407673|gb|EAW17622.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL
181]
Length = 341
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 151/319 (47%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ F IGTR S LAL ++L P + I T GD+ T L E K
Sbjct: 15 SRRTFTIGTRKSKLALMQTDLVVAALKK--SWPEYTFQIHSQETAGDKNTVIALREFTTK 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + +
Sbjct: 73 NLWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMAF 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
++ SV+GTSS+RR A L R + V D RG I TRL KL+ I+LA AG+
Sbjct: 133 SEMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIILAAAGL 192
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL E I + L+ ++ + GQGA+ +E ++ ++++ I H +T + ER
Sbjct: 193 LRLGLEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKLLRDMLSSIGHHETTMACLAER 252
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
+ L L+G C + + L IV++ DG+ EV +G+ A
Sbjct: 253 SLLRTLEGGCSAPLGVETEWVQDSDGSSKLRMRAIVVSVDGRESAEVEVDGSVDTSESAG 312
Query: 287 NIGRDAAQYIRFISNKNVF 305
G A+ + +
Sbjct: 313 EFGVTVAKALVEKGAGEIL 331
>gi|21227846|ref|NP_633768.1| porphobilinogen deaminase [Methanosarcina mazei Go1]
gi|23821683|sp|Q8PW57|HEM3_METMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|20906258|gb|AAM31440.1| Porphobilinogen deaminase [Methanosarcina mazei Go1]
Length = 316
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 149/302 (49%), Gaps = 9/302 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64
IGTR S LALA L + I + T GDR T+R L + GG G F
Sbjct: 1 MIIGTRGSQLALAQTENVARLLKEK----GVETSIKIIKTSGDRFTDRPLHAVSGGVGAF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E++ +++GEID AVHS KDMPT K + A L R+ D+ +++ L +L
Sbjct: 57 VRELDDVMLAGEIDIAVHSMKDMPTIRPKAIPTVAVLKRDTPFDILLTYDGTPLDELPEQ 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S+IGTSSLRR A + R+R DI + RG I+TRL KL + I+LA AG++R+ E
Sbjct: 117 SIIGTSSLRRTAQIRRYRPDIITQNLRGNIDTRLRKLREGQYDGIMLAKAGLERMGWEIE 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
EI + + F PSP QG + + T +A+ V +++H ++ ER +AEL G C
Sbjct: 177 G-EIFSPDFFCPSPNQGTVAVVTR-EGTEAEAAVSMLDHTESRIVTEIERILIAELGGGC 234
Query: 245 KSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+ + +A ++ VL+ DG+ + I R+ + + +
Sbjct: 235 TTPVGSYAEITPDRQEIHVRAEVLSLDGREAIRIDEFIPLRGGIEKARELGHRLVEMGGR 294
Query: 303 NV 304
+
Sbjct: 295 RL 296
>gi|320010120|gb|ADW04970.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331]
Length = 328
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 17/316 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P R+GTR S LA+A + ++ +V + ++ ++T GD I+ L +IGG
Sbjct: 11 TTTPLRLGTRRSKLAMAQSGMVADAVREVT---GRAVELVEITTYGD-ISREHLAQIGGT 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + + L+SGE+D AVHS KD+PT +GL ++A PRED RD ++ + L
Sbjct: 67 GVFVAALREALLSGEVDFAVHSLKDLPTTQPEGLVLAAVPPREDPRDALVARDGLTFGQL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ IGT S RR A L + DI + RG ++TR+ + + + A++LA AG+
Sbjct: 127 PAGARIGTGSPRRMAQLNAYARSHGLDIETVAIRGNVDTRIGFVRSGELDAVVLAAAGLS 186
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + + + L ++ P+PGQGA+ +E ++ + ++ T +V ERA L
Sbjct: 187 RLGRTDEVTDFLPVDTVLPAPGQGALAVECAESSADLAAALAELDDPYTRIAVTAERALL 246
Query: 238 AELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINI 288
L+ C + + A +G + L G+V ++DG ++S G DA +
Sbjct: 247 NALEAGCSAPVGALADLLAEGQVVNELRLRGVVGSTDGTSLVQLSITGPVPTSHDDAAAL 306
Query: 289 GRDAAQYIRFISNKNV 304
GR+ A + +
Sbjct: 307 GRELAAEMLAKGAAGL 322
>gi|229117967|ref|ZP_04247327.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3]
gi|228665416|gb|EEL20898.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3]
Length = 295
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 6/291 (2%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ L + P+ + + TKGD I + TL+++GGKGLF +EIE L+ E
Sbjct: 1 MTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGLFVKEIEHALLMKE 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KDMP L +GL I R D RD FIS + S KDLA +++GTSSLRR A
Sbjct: 59 IDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKDLAEGAILGTSSLRRSA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IKEILNIEDFP 195
LL R D+ V RG I+TRL KL AI+LA AG++R+ + I E L+
Sbjct: 119 QLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEVITEHLDETLCV 178
Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC- 254
P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C+ IAG+A
Sbjct: 179 PAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEGGCQVPIAGYATLT 238
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
K + +V + DG + + + G + +G +AA + K +
Sbjct: 239 KDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADLLIKQGAKELI 287
>gi|91084135|ref|XP_967479.1| PREDICTED: similar to porphobilinogen deaminase [Tribolium
castaneum]
gi|270006650|gb|EFA03098.1| hypothetical protein TcasGA2_TC013007 [Tribolium castaneum]
Length = 460
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 108/293 (36%), Positives = 152/293 (51%), Gaps = 12/293 (4%)
Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + + R+G+R S LAL S L +H P + I+ +ST GD++ + L +IG
Sbjct: 1 MSEIEKIRVGSRKSELALIQTRHVISLLKKIH--PGKDFEIVTMSTLGDKVLDIPLPKIG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ 116
K LFT+E+E L +G +D VHS KD+PT L G+ I A L RED RD + H
Sbjct: 59 EKSLFTKELEAALSTGCVDFVVHSLKDLPTVLPPGMAIGAVLTREDPRDALVLQKDHDKY 118
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAG 175
L+ L SVIGTSSLRR A L R + V RG + TRL KL+ K AI+LA AG
Sbjct: 119 LLETLPEGSVIGTSSLRRGAQLARKYPHLKVESIRGNLNTRLKKLDELGKYQAIILASAG 178
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R+ I +IL+ ++ + GQGA+ +E ++ K EL+K + T V ER+
Sbjct: 179 LIRMGWTSRISKILDSDELLYAVGQGALAVECRESDEKTIELLKPLYDVQTALRVISERS 238
Query: 236 FLAELDGSCKSAIAG---FAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRC 283
FL L G C + +A + K + TL G V + DGK +
Sbjct: 239 FLKTLGGGCSAPVAVSSDLSRLKDNKHTLKLKGAVWSLDGKEEIIETGECEID 291
>gi|308063099|gb|ADO04986.1| porphobilinogen deaminase [Helicobacter pylori Sat464]
Length = 306
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N K ++ +N E++ + ERAF+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLERAFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKNKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|261839094|gb|ACX98859.1| porphobilinogen deaminase [Helicobacter pylori 52]
Length = 306
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E + K ++ +N E + + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEKSAFCCHLEREFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|170703456|ref|ZP_02894225.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10]
gi|170131633|gb|EDT00192.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10]
Length = 304
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 162/293 (55%), Gaps = 5/293 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G
Sbjct: 1 MWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPPGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ ++++ED PP
Sbjct: 119 MLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + ++ T +V ER L GSC+ +A A +
Sbjct: 179 AAGQGALGIEIAAHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAAHAVWRA 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306
LY G V +DG+ G DA+ +GR + + ++ N
Sbjct: 239 GELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGALDIVN 291
>gi|238578919|ref|XP_002388878.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553]
gi|215450574|gb|EEB89808.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553]
Length = 350
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 148/320 (46%), Gaps = 17/320 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIG 59
+ F + +R S LA SL ++ ++T GD+ ++ L +G
Sbjct: 9 RTFVLASRASQLAQIQTNMVLDSLKALYPDTTSESNPKFTTSFMTTAGDKNQSQALYLLG 68
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114
GK L+T+E+E L+ E+D VHS KD+PT L +G I L RED D +
Sbjct: 69 GKALWTKELEVALLEREVDMLVHSLKDVPTVLPEGCMIGGILEREDPVDSLVVKRGYEDK 128
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172
+SL DL SV+GTSS+RR A L R + D RG + TR+ KL+ + AI+LA
Sbjct: 129 WKSLDDLPEGSVVGTSSVRRVAQLKRNYPGLKFQDVRGNLNTRMAKLDAPDGPYAAIILA 188
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ RL + L + QGA+ +E N+ +A EL K I H++T +
Sbjct: 189 KAGMVRLGMGDRLTCDLAPPTLFHAVSQGALAVEIRNNDKEALELCKRITHQNTAWKCSA 248
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
ERA L L+G C + ++ K L G V + DG E + +A
Sbjct: 249 ERACLRVLEGGCSVPVGVSSFLKHDKELVLEISGCVTSLDGSTHVEHTLKEPVTSVEEAE 308
Query: 287 NIGRDAAQYIRFISNKNVFN 306
++G A+ + + + +
Sbjct: 309 DVGGRLARILIETGAREILD 328
>gi|315586235|gb|ADU40616.1| hydroxymethylbilane synthase [Helicobacter pylori 35A]
Length = 306
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK R G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKERQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|126439305|ref|YP_001058121.1| porphobilinogen deaminase [Burkholderia pseudomallei 668]
gi|166201498|sp|A3N700|HEM3_BURP6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|126218798|gb|ABN82304.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 668]
Length = 329
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMVLPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|260061130|ref|YP_003194210.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501]
gi|88785262|gb|EAR16431.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501]
Length = 315
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 143/317 (45%), Gaps = 21/317 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR S LAL A R L H ++P+ + GD + ++ L E+G
Sbjct: 1 MS-RALRIGTRDSELALWQAQTVRDRLEAA----GHRAELVPVKSTGDLVLDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ L+ +ID AVHS KD+PT L +G+ +A L R RDV + L
Sbjct: 56 TGIFTKTLDVALLREDIDLAVHSMKDVPTALPEGICQAAVLERASARDVLVHKGLGFL-- 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
I T SLRRKA L V RG + TRL L N + A AG++R+
Sbjct: 114 -DGPGTIATGSLRRKAQWLNRYPAHQVTGLRGNVNTRLKLLRENSWDGAIFAQAGLERIG 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E ++ P+P QGA+ + ++ A+E + ++HE + V ER FL L
Sbjct: 173 LLPDNAE--PLDWMLPAPAQGAMLVVARTSDTAAREAARPLHHEQSALEVAVEREFLRTL 230
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-NGNRC----------DAINIG 289
+G C + I + L+ G + + DGK V+R G+ DA G
Sbjct: 231 EGGCSAPIGARVHAADGQLHLEGGLFSLDGKKAFRVTRHTGSLEAGGTGDARFQDAGEFG 290
Query: 290 RDAAQYIRFISNKNVFN 306
A+ I +
Sbjct: 291 AACAREILDSGGAVLME 307
>gi|134281147|ref|ZP_01767856.1| porphobilinogen deaminase [Burkholderia pseudomallei 305]
gi|134247453|gb|EBA47538.1| porphobilinogen deaminase [Burkholderia pseudomallei 305]
Length = 329
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|254388880|ref|ZP_05004112.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|254393333|ref|ZP_05008481.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294813175|ref|ZP_06771818.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064]
gi|326441528|ref|ZP_08216262.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197702599|gb|EDY48411.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|197706968|gb|EDY52780.1| porphobilinogen deaminase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|294325774|gb|EFG07417.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064]
Length = 319
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + + + P + ++ ++T GD + L +IGG
Sbjct: 1 MTERALRLGTRRSMLAMAQSGQVAQEVRRLTGRP---VELVEITTYGDISREQ-LAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ +
Sbjct: 57 TGVFVAALREALLRGEVDFAVHSLKDLPTGQPDELALAAIPRREDPRDVLVARDGLTFDR 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L + + RG I+TR+ + + K A++LA AG+
Sbjct: 117 LPDGARVGTGSPRRMAQLNAYARAHGLRIETVPIRGNIDTRIGYVRSGKLDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + ++L+++ P+PGQGA+ IE + + ++ T +V ER+
Sbjct: 177 NRIGRADEVTDVLSVDSVLPAPGQGALAIECAAADADLAATLGALDDPHTRVAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A G + G+V +DG ++S G DAI
Sbjct: 237 LAALEAGCSAPVGALADLLGDEEVVTEMRLRGVVGTTDGSTLVQLSTTGPVPTSHGDAIA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+GR+ A + +
Sbjct: 297 LGRELASEMLAKGAAGL 313
>gi|227508197|ref|ZP_03938246.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227192426|gb|EEI72493.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 303
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 148/302 (49%), Gaps = 6/302 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F +GTR S LA+ +L + + P + ++T+GDR +L +IGGK
Sbjct: 1 MKPEFVVGTRQSKLAMRQTNLVVDALKE--RFPKIIFKVEKITTQGDRNRKDSLRKIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE++L ID AVHS KD+ L K L I R+ D IS S D
Sbjct: 59 GIFVKEIEQRLTDKRIDFAVHSLKDVMPSLPKNLIIGGVPKRDSPFDCLISTKPFSDIDQ 118
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGTSS RR+ R D+ ++ RG +++R+ KL + I+LA AG+ RL
Sbjct: 119 LPKGARIGTSSSRRQGQFSHLRPDVEIVSIRGNVDSRIQKLQRDHLDGIILAEAGLNRLG 178
Query: 181 KEKVIKEILNIE-DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ L+++ D P+ GQGAI IE ++ L+K I DT SV ER FL
Sbjct: 179 VDLTGLYRLSLKNDLLPAAGQGAIGIECRADDHDTLALLKQIEDADTRQSVTIERDFLRR 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L GSC I FA + F G+V + DGKIF S+ N+G + A +
Sbjct: 239 LGGSCNFPIGAFASQTSMGVRFDGLVASIDGKIFFSKSKT--EQTGGNLGEEVADELISE 296
Query: 300 SN 301
Sbjct: 297 GA 298
>gi|53718657|ref|YP_107643.1| porphobilinogen deaminase [Burkholderia pseudomallei K96243]
gi|53725180|ref|YP_102499.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344]
gi|76808885|ref|YP_332640.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b]
gi|121600693|ref|YP_993593.1| porphobilinogen deaminase [Burkholderia mallei SAVP1]
gi|124386445|ref|YP_001028944.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10229]
gi|126449020|ref|YP_001081141.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10247]
gi|126455102|ref|YP_001065357.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a]
gi|167003503|ref|ZP_02269289.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20]
gi|167901767|ref|ZP_02488972.1| porphobilinogen deaminase [Burkholderia pseudomallei NCTC 13177]
gi|217419743|ref|ZP_03451249.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576]
gi|226194325|ref|ZP_03789923.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9]
gi|237811340|ref|YP_002895791.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346]
gi|242316542|ref|ZP_04815558.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b]
gi|254178350|ref|ZP_04885005.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399]
gi|254190785|ref|ZP_04897292.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237]
gi|254199404|ref|ZP_04905770.1| porphobilinogen deaminase [Burkholderia mallei FMH]
gi|254205719|ref|ZP_04912071.1| porphobilinogen deaminase [Burkholderia mallei JHU]
gi|254260166|ref|ZP_04951220.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a]
gi|254298288|ref|ZP_04965740.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e]
gi|254357877|ref|ZP_04974150.1| porphobilinogen deaminase [Burkholderia mallei 2002721280]
gi|61213345|sp|Q62LC0|HEM3_BURMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|61213357|sp|Q63W73|HEM3_BURPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123599913|sp|Q3JUW3|HEM3_BURP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513523|sp|A3NSN6|HEM3_BURP0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201495|sp|A3MLK5|HEM3_BURM7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201496|sp|A2SAH5|HEM3_BURM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201497|sp|A1V5U0|HEM3_BURMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52209071|emb|CAH35011.1| putative porphobilinogen deaminase protein [Burkholderia
pseudomallei K96243]
gi|52428603|gb|AAU49196.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344]
gi|76578338|gb|ABA47813.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b]
gi|121229503|gb|ABM52021.1| porphobilinogen deaminase [Burkholderia mallei SAVP1]
gi|124294465|gb|ABN03734.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10229]
gi|126228744|gb|ABN92284.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a]
gi|126241890|gb|ABO04983.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10247]
gi|147749000|gb|EDK56074.1| porphobilinogen deaminase [Burkholderia mallei FMH]
gi|147753162|gb|EDK60227.1| porphobilinogen deaminase [Burkholderia mallei JHU]
gi|148027004|gb|EDK85025.1| porphobilinogen deaminase [Burkholderia mallei 2002721280]
gi|157808153|gb|EDO85323.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e]
gi|157938460|gb|EDO94130.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237]
gi|160699389|gb|EDP89359.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399]
gi|217397047|gb|EEC37063.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576]
gi|225933410|gb|EEH29399.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9]
gi|237505195|gb|ACQ97513.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346]
gi|242139781|gb|EES26183.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b]
gi|243060977|gb|EES43163.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20]
gi|254218855|gb|EET08239.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a]
Length = 329
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|309810452|ref|ZP_07704278.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185]
gi|308435584|gb|EFP59390.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185]
Length = 327
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 10/303 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+ + L H + I+ ++T+GD +L ++GG G+F
Sbjct: 10 PIRLGTRRSHLAMTQSTWVAEQLRAH----GHAVEIVEITTEGDVNR-ASLAQMGGTGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
I + L+ E+D AVHS KD+P GL I+ RED RD ++ +L +L
Sbjct: 65 AAAIRRALLEDEVDMAVHSLKDLPVAPEPGLVIAGIPVREDPRDALVARDGLTLGELPAG 124
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GT S RR A L + D RG I+TR+ + + + ++LA AG+ R+++
Sbjct: 125 AVVGTGSPRRAAQLQALGLGFEIRDIRGNIDTRMGYVTSGELDGVILARAGLARVERTGA 184
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E ++ P+PGQGA+ +E + + + ++ DT +V ERA L L+ C
Sbjct: 185 ISETIDPLQMLPAPGQGALGLECREGDARVIAALAELDDADTRAAVTAERAVLGALEAGC 244
Query: 245 KSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + A + V A DG S G+ + +G A+ +
Sbjct: 245 AAPVGALAEIVEEPDGSLEISLRAFVGAPDGSFELRRSDVGSYDNPAAVGEALARTLLDD 304
Query: 300 SNK 302
Sbjct: 305 GAG 307
>gi|325967722|ref|YP_004243914.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28]
gi|323706925|gb|ADY00412.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28]
Length = 305
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 8/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S L+L + L V P +I + T GD + ++ L IG KG+F
Sbjct: 2 KIRIATRGSRLSLIQSDIVMRMLRRVE--PNIQFEVIIIRTTGDLVQDKPLYAIGTKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL--KDLA 122
+E+ L+ E D AVHS KD+P+++ GL I+ + PR+ DV + L
Sbjct: 60 EKEVNLALLKDEADIAVHSLKDLPSEISPGLVIAGFSPRDPPFDVLVVRNDYPSDLMALP 119
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSS+RR+A LL R DIS+ RG ++TR+NKL A+++A AG+ RL +
Sbjct: 120 SGAKVGTSSVRRRAFLLSVRKDISINVIRGNVDTRINKLIRGDYDAVVIAEAGLVRLIND 179
Query: 183 KVIKE----ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ ++ PP+PGQG I + T + +L++ + ERAFL
Sbjct: 180 MKSLHIRYARIPLDLLPPAPGQGIIAVVTREKDTNLIDLLRKASDPKAMVEALAERAFLR 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+ G C + G A G+ + F + +G V + D +G +AA +
Sbjct: 240 TVGGGCHVPVGGIAIYDGNYMEFIAGIADINGNRKVIVKIRDSSIDPERLGINAAHELLR 299
Query: 299 I 299
Sbjct: 300 Q 300
>gi|319953182|ref|YP_004164449.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237]
gi|319421842|gb|ADV48951.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237]
Length = 524
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 93/302 (30%), Positives = 149/302 (49%), Gaps = 8/302 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A + L + + V++P+ + GD + ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSELALWQARTVQKQLKEQ----GYQSVLVPVKSMGDLVLDKPLHELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ ++ GEID AVHS KD+PT L KG+ +A L R + D+ +
Sbjct: 56 TGVFTKTLDIAMLKGEIDIAVHSMKDVPTVLPKGIVQAAVLKRGNYMDILAFKHNEEFLS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+VI T SLRRKA L V+D RG ++TR +KL +N + + A AG++R+
Sbjct: 116 QK-EAVIATGSLRRKAQWLNRYPTHEVVDLRGNVQTRADKLEDNDWNGAIFAAAGLERVG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E + + P+P QGA+ + ++ ++ +NH++T ER FL L
Sbjct: 175 LEFENT--IGLTWMVPAPAQGAVVVVALEDDEFSKTACAELNHKETEICTTLERKFLNLL 232
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I A K + + G++L+ DGK EV N+ + +
Sbjct: 233 EGGCTAPIGALAIIKDTNVSLKGVLLSVDGKKRIEVEFTSKLGKHENLAEACVERVFSRG 292
Query: 301 NK 302
K
Sbjct: 293 GK 294
>gi|302535112|ref|ZP_07287454.1| porphobilinogen deaminase [Streptomyces sp. C]
gi|302444007|gb|EFL15823.1| porphobilinogen deaminase [Streptomyces sp. C]
Length = 322
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 86/320 (26%), Positives = 157/320 (49%), Gaps = 20/320 (6%)
Query: 1 MEKKP---FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M +P R+GTR S LA++ + ++ + P + ++ ++T GD ++ L +
Sbjct: 1 MNTRPDQPLRLGTRRSKLAMSQSGHVAEAVRAITGRP---VELVEITTYGD-VSRENLAQ 56
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IGG G+F + L+ GE+D AVHS KD+PT L I+A RED RD ++ +
Sbjct: 57 IGGTGVFVTALRDALVRGEVDFAVHSLKDLPTAQPDELVIAAMPKREDPRDALVARDGLT 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAY 173
+ L + +GT S RR A L + + + RG ++TR+ + + + A++LA
Sbjct: 117 FEQLPDGARVGTGSPRRMAQLNAYARSLGKSVETVAIRGNVDTRIGFVRSGELDAVVLAA 176
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ + ++L++++ P+PGQGA+ +E ++ + ++ T +V E
Sbjct: 177 AGLNRIGRADEATDLLSVDNVLPAPGQGALAVECLASDADLISALGRLDDPHTRAAVTAE 236
Query: 234 RAFLAELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CD 284
RA LA L+ C + + A G + + G+V DG ++S G +
Sbjct: 237 RALLAALEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGSTLVQLSTTGPVPQSYDE 296
Query: 285 AINIGRDAAQYIRFISNKNV 304
A+ +GR+ A + +
Sbjct: 297 AMALGRELADEMLAKGAAGL 316
>gi|149194367|ref|ZP_01871464.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2]
gi|149135542|gb|EDM24021.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2]
Length = 295
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 105/298 (35%), Positives = 160/298 (53%), Gaps = 10/298 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL A + L ++ H + + ++T GD+I ++ L IGGKGLF
Sbjct: 2 KLTIATRGSKLALWQAEWVKKRLENL----GHEVDLKIVTTTGDKILDKPLASIGGKGLF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLL-KGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
+E+E+ L+ GE AVHS KD PT+ + ++A RE + DVF+S T ++L +L
Sbjct: 58 IKEVEEALLRGEAQIAVHSLKDFPTEYNKEHFTLAAVPKREAVEDVFLSETFETLAELPH 117
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--K 181
++V+GTSS+RR L +R D+ + D RG ++TR+NKL + AI+LAYAG+KRL K
Sbjct: 118 NAVVGTSSIRRAMQLKAFREDLVISDLRGNVDTRINKLKKGEYDAIILAYAGVKRLNLIK 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E EIL+ + P+ GQGA+ IET + K E VK +N T V ER F+ EL+
Sbjct: 178 EVKYFEILDTDIMIPAMGQGALGIETI-KDEKVIEAVKPLNDLWTKIEVTIERDFIDELN 236
Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C + + A ++ +L + + + N GR+ A+ +
Sbjct: 237 LGCHAPVGVNAKIMVDDSIKIKAAILDKN-NKVIKKEMVVPFDEWENAGREFAEEFKE 293
>gi|332673079|gb|AEE69896.1| hydroxymethylbilane synthase [Helicobacter pylori 83]
Length = 306
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA G+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEVGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E + K ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLEREFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|269128634|ref|YP_003302004.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183]
gi|268313592|gb|ACY99966.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183]
Length = 311
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 12/305 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S +A + L + H + ++ ++T+GD I+ L ++GG G+F
Sbjct: 4 LRLGTRKSLMATTQSRRVGDELTRLT---GHAVELVGVTTEGD-ISRAHLAQMGGTGVFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ KLISGE+D AVHS KD+PT +G+ ++A R+D RD L DL +
Sbjct: 60 SALRDKLISGEVDFAVHSLKDLPTAPAEGITLAAVYRRDDPRDALCGPLK--LADLPRGA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L R D+ ++ RG +TRL K+ + + A++LAYAG+ R+ + +
Sbjct: 118 RVGTGSPRRVAQLRALRGDLEIVPIRGNADTRLRKVADGELDAVVLAYAGLGRIGRRDAV 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ + D P+PGQGA+ +E + EL+ ++H T +V ER LA L+ C
Sbjct: 178 VEVFDPADMLPAPGQGALALECRSDRLDLIELLATVDHAPTRAAVTAERTVLAVLEAGCS 237
Query: 246 SAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + +A + S +L+ V DG +S +G+ A IGR+ A +
Sbjct: 238 APVGAYATVEDSAEEEQPSLHLSACVAGIDGARQVRLSGSGHPERAEEIGRELAAQLLAQ 297
Query: 300 SNKNV 304
+
Sbjct: 298 GADQL 302
>gi|297379462|gb|ADI34349.1| porphobilinogen deaminase [Helicobacter pylori v225d]
Length = 306
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 5/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IG+R S LAL A + L I + TKGD+I + L +IGGKGLF
Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L
Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183
+ +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 120 AKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
++ ++E+ PS GQGA+ +E N K ++ +N E++ + ERAF+ L+G
Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLERAFVKGLNGG 238
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I A G + ++ +GK + G++ A ++ ++ + K
Sbjct: 239 CQIPIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDLVQELLEAFLQSGAKE 298
Query: 304 VFN 306
+
Sbjct: 299 ILE 301
>gi|307266129|ref|ZP_07547673.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918819|gb|EFN49049.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 299
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 12/305 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++G+R S LAL + + + I+ ++T+GD + ++ ++EIGGK
Sbjct: 1 MKKVIKVGSRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPISEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP ++ + L++ A L RED +DVF+S DL
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPEKLKLMAVLKREDPKDVFVSRNGTKFIDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L R DI ++ RG + TRL K+ I+L+ AG+ RL
Sbjct: 119 KKGAKIGTSSLRRQVQLKALRPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + T+ + ER L
Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVF 238
Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+C+ +A G + D + G + + I
Sbjct: 239 GVNCRQPFGAYAQYGRENDGEKIDIKVAYQKED--KLLKSEMTGLIVETDKMIEKL---I 293
Query: 297 RFISN 301
+
Sbjct: 294 KEFGG 298
>gi|302205429|gb|ADL09771.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis C231]
gi|308275667|gb|ADO25566.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis I19]
Length = 296
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 7/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F IGTR S LA + R +L+ ++ + ++T GD + IG G+F
Sbjct: 2 TFTIGTRGSLLATTQSGHVRDALISQ----GYSAELSIVTTPGDVNM-APVERIG-VGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L+ G D AVHS KD+PT+ + R D RD ++ +L +L
Sbjct: 56 TQALRDVLVKGGCDIAVHSFKDLPTQRDPRFHLI-VPERADARDCLVARDGLTLAELPQG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C
Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + L G V++ DG + G +A+ IG A + +
Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVFRATMTGGLSEAVAIGEKVAAKLIQDGAAEL 294
Query: 305 F 305
Sbjct: 295 L 295
>gi|115387533|ref|XP_001211272.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
gi|114195356|gb|EAU37056.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
Length = 342
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 105/319 (32%), Positives = 155/319 (48%), Gaps = 17/319 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K F IGTR S LAL +++L P ++ I T GD+ T L + K
Sbjct: 17 KTTFTIGTRKSKLALLQTDLVQAALQKA--WPQYSFRIHSRETAGDQNTTIALRDFTTKN 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
L+T+E+E LI+G++D VHS KD+PT L + L RED RDV + +SL
Sbjct: 75 LWTQELEDLLIAGDVDLIVHSLKDVPTLLPPSCTLGPMLKREDTRDVLVVKKGLSYKSLD 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
DL SV+GTSS+RR A L R + +ID RG I TRL KL+ + I+LA AG+
Sbjct: 135 DLPAGSVVGTSSIRRTAQLARRYPHLKIIDVRGNIGTRLAKLDAEDGPFTCIILAAAGLL 194
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RL + I + L+ ++ + GQGA+ IE ++P E++K I ++T + ER+
Sbjct: 195 RLGLQDRITQYLDSKNGGMLYAVGQGALGIEIRKDDPLMHEMLKNIGDDETTFASLAERS 254
Query: 236 FLAELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAIN 287
L L+G C + + + L IV++ DGK EV +G+ A
Sbjct: 255 LLRTLEGGCSAPLGVESEWIPSSGSSRKLRMRSIVVSVDGKESAEVEVDGDVDSVDSAEA 314
Query: 288 IGRDAAQYIRFISNKNVFN 306
G A + +
Sbjct: 315 FGIKVANALVEKGAGKILE 333
>gi|225630165|ref|YP_002726956.1| porphobilinogen deaminase [Wolbachia sp. wRi]
gi|254800263|sp|C0R2M3|HEM3_WOLWR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|225592146|gb|ACN95165.1| porphobilinogen deaminase [Wolbachia sp. wRi]
Length = 292
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 3 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L +
Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 121 TIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + LY ++ DGK + R DA +G DA ++
Sbjct: 238 TPLAALAEYVSENMLYLRCMLA--DGKNIYFTERTSFIEDAEKMGMDAGLELKSK 290
>gi|317177053|dbj|BAJ54842.1| porphobilinogen deaminase [Helicobacter pylori F16]
Length = 306
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---MESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLEREFVKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A+++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|332798468|ref|YP_004459967.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1]
gi|332696203|gb|AEE90660.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1]
Length = 293
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 160/301 (53%), Gaps = 9/301 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++G+R S LAL S L + P + +I + T GD+ N + E+G K
Sbjct: 1 MKKIVKVGSRQSQLALVQTELVISQLKE--HFPQWDFKLITVKTTGDKFLNSNMYELG-K 57
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G F +EIE+ L+SG ID AVHS KD+P +L +GL ISA RED RDVFIS + +L
Sbjct: 58 GAFVKEIEEALLSGAIDMAVHSLKDVPHELPEGLAISAITRREDPRDVFISADDRRFSEL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSS+RR L + R DI + RG I TR+ K+ I+LA AG+KRL
Sbjct: 118 DTGAKIGTSSMRRMCELNKLRQDIECVPIRGNINTRIKKIKTCGLDGIVLAAAGVKRLGM 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E +I + + ++ P+ GQGA+ +ET + + VK IN ++T + ERAF+ +
Sbjct: 178 ENLITDYFSPDEIVPAVGQGALAVETR-ADDEMSLFVKYINDDETTCATGAERAFMKVVG 236
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
GSCK + +A L G++ DG + G + +A IG A+ +
Sbjct: 237 GSCKQPMGAYAEIFDDALKLIGMIER-DG-VVKWGKLEGRKSEAEQIGIRLAEEL---GG 291
Query: 302 K 302
K
Sbjct: 292 K 292
>gi|262341328|ref|YP_003284183.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272665|gb|ACY40573.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 309
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 147/308 (47%), Gaps = 9/308 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK RIGTR SPLA+ A + + L + + ++GD I N + +
Sbjct: 1 MKKIIRIGTRNSPLAVFQAQKVQKLLKKEGYFSH----LFKIKSEGDLIQNVPIHALKHV 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-KD 120
G+FT+++ ++SGEID AVHS KD+P L +G+ +SA+L RE D + + D
Sbjct: 57 GVFTKKLTNIMLSGEIDMAVHSLKDVPINLPEGIILSAFLKRESFFDSLVYKGSSDFLYD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+H+VI T S+RR A +ID RG I TRL KL N+ L A G++RL
Sbjct: 117 PKIHAVIATGSIRRSAFWKNRYPHHGLIDLRGNINTRLKKLQNSSWKGALFAQVGLERLG 176
Query: 181 --KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ PSPGQG I + T L+K ++ +T S N ER FL
Sbjct: 177 ILNNFKCLNCKILDWMIPSPGQGIIVVSTLEKKDSINSLIKKLDDIETRLSANIERQFLK 236
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C S I A K +YF G++L+ DG + +R G + IG A+ I
Sbjct: 237 TLGGGCISPIGAHAKIKNKIIYFTGMLLSLDGMHKIKKTRIGT--NYDLIGFQCAEEILK 294
Query: 299 ISNKNVFN 306
+ +
Sbjct: 295 EGGREILE 302
>gi|225010397|ref|ZP_03700869.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C]
gi|225005876|gb|EEG43826.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C]
Length = 303
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 9/301 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
K RIGTR S LA+ A +S L ++P+ + GD ++ L E+G G+
Sbjct: 3 KTLRIGTRDSALAMWQAKTVQSQLAAH----GIASELVPVKSLGDLKLDQPLYELGVTGV 58
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ ++ L++GEID AVHS KD+PT L KGL +A L R DV + +
Sbjct: 59 FTKTLDLALLAGEIDLAVHSYKDVPTVLAKGLSTAAVLKRASTADVLVHKSPDFT---TS 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
I TSSLRRKA L + ++D RG ++TRL KL NN + A AG+ RL +
Sbjct: 116 GLQIATSSLRRKAQWLAKYPEHQLVDIRGNVQTRLEKLANNSWGGAIFAAAGLARL--DL 173
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + + ++ P+P QGA+ + + E + V+N T ER FL EL+G
Sbjct: 174 LPENAMRLDWMVPAPAQGAMVVVAQSAHTVLLEELSVLNDSQTALCTQIEREFLNELEGG 233
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C + I L+F G++ + DGK E + A GR AQ I K
Sbjct: 234 CTAPIGALCTTTQDQLHFIGVLHSLDGKQHIETNTFVPLDQAPGYGRKMAQKILSQGGKA 293
Query: 304 V 304
+
Sbjct: 294 L 294
>gi|121605981|ref|YP_983310.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2]
gi|120594950|gb|ABM38389.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2]
Length = 331
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 19/313 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LA+ A ++ L + ++ ++T GD+I +R+L+++GGKGLF
Sbjct: 13 KVVIATRESRLAMWQAEHVKALLESRLGW---QVELLGMTTLGDQILDRSLSKVGGKGLF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++ L RED D F+S+ SL +L
Sbjct: 70 VKELEVALSEGRADLAVHSLKDVPMDLPEGFALACVLEREDPHDAFVSNDFASLAELPPG 129
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR LL R D+++ RG ++TRL KL+ + AI+LA AG+KRL E
Sbjct: 130 AVVGTSSLRRLVLLKALRPDLAIQPLRGNLDTRLRKLDEGQYQAIVLAAAGLKRLGLESR 189
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ D P+ GQGA+ IE + + + H+ TW +V ER + GSC
Sbjct: 190 IRHTFAPTDMLPAAGQGALGIEVRADRADLIAALATLAHQPTWLAVTAERTVSRAMGGSC 249
Query: 245 KSAIAGFAYC-KGSTLYFYGIVLAS---DGK------------IFHEVSRNGNRCDAINI 288
+A F L D + + + +A +
Sbjct: 250 SMPLAAFVTAGSDGALQLDAAWGDPATADASSGVSAVLPAPLVQVRQTAVVRSFAEAEAL 309
Query: 289 GRDAAQYIRFISN 301
G A +R
Sbjct: 310 GDAVAAQLRAGGA 322
>gi|21221749|ref|NP_627528.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289770973|ref|ZP_06530351.1| porphobilinogen deaminase [Streptomyces lividans TK24]
gi|11386858|sp|Q9WX16|HEM31_STRCO RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName:
Full=Hydroxymethylbilane synthase 1; Short=HMBS 1;
AltName: Full=Pre-uroporphyrinogen synthase 1
gi|5123663|emb|CAB45352.1| putative porphobilinogen deaminase [Streptomyces coelicolor A3(2)]
gi|289701172|gb|EFD68601.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 319
Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ V P + ++ ++T GD L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGDTSR-EHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ A+ L D
Sbjct: 57 TGVFVAALRDALLRGEVDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLTD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVI----DFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT + RR A L + + RG ++TR+ + + + A++LA AG+
Sbjct: 117 LPRGARVGTGAPRRMAQLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+
Sbjct: 177 NRVGRIDEVTDFLSVDTVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A + G+V +DG ++S G A+
Sbjct: 237 LAALEAGCSAPVGALADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAALA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+G + A + +
Sbjct: 297 LGGELAAEMLAQGAAGL 313
>gi|302410259|ref|XP_003002963.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102]
gi|261357987|gb|EEY20415.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102]
Length = 353
Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 147/316 (46%), Gaps = 16/316 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ +L + P + I + T GD+ L GGKGL+
Sbjct: 20 TVRIGTRRSALAVRQTELVIEALKRIR--PDYTYEIHAMQTLGDKDQVTALYNFGGKGLW 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-----TAQSLK 119
T E+E KL + EID VHS KDMPT L +G + A + RE+ DV + +S+
Sbjct: 78 TNELEAKLTNNEIDVIVHSLKDMPTVLPEGCILGAVVERENPHDVVVFKDTVADQYKSIA 137
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIK 177
DL SV+GTSS+RR A L R + D RG I+TRL KL+N AI+LA AG+
Sbjct: 138 DLPAGSVVGTSSIRRIAQLKRKYPGLQFADVRGNIQTRLAKLDNPDGPFTAIILAAAGLL 197
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ I + L + + GQGA+ IE ++ + L++ I H T + ER+
Sbjct: 198 RMDLGGRIGQYLASDTGGILHAVGQGALGIEARTDDDRVLTLLRGIEHGPTRLAAEAERS 257
Query: 236 FLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGR 290
+ L+G C I + TL V DG + + A +GR
Sbjct: 258 VMRTLEGGCSVPIGVETTWRDDGKTLTLKASVTHVDGTHGVDGESTRVIESPEAADQLGR 317
Query: 291 DAAQYIRFISNKNVFN 306
D A + + + +
Sbjct: 318 DLAAELVGRGAQTILD 333
>gi|312137417|ref|YP_004004754.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088]
gi|311225136|gb|ADP77992.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088]
Length = 289
Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 104/291 (35%), Positives = 162/291 (55%), Gaps = 6/291 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR SPLAL + + L + + I + T GD+I + L +IG +G+FT
Sbjct: 1 MIVGTRGSPLALKQTYYVVNQLSKLVN---EEVKIKIIKTTGDKIKDSQLHKIGQRGVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI+K +++ E+D AVHS KD+PT+L + L+I A R+ +V +S S +L+
Sbjct: 58 KEIDKAVLNEEVDLAVHSLKDVPTELHEDLEIVAIPHRDSPNEVLVSKY--SWDELSEEC 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRRKA + RG IETR+ K+ + + A ++A A +KRL EK I
Sbjct: 116 ILGTSSLRRKAFCRYHGKKFKIKPLRGNIETRIKKVEDGEYDATIMAEAALKRLNLEKYI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K+ +++ F PS GQGAI IET ++ K ++K +N + V ER L EL C+
Sbjct: 176 KKRFSVKYFTPSAGQGAIAIETR-SDSKYISVLKKLNDHRAFYEVTAERTVLKELGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
I A KG L Y I+L+ GK+ ++ +G +A +G+ AA+ +
Sbjct: 235 WPIGVVARSKGKNLNLYAILLSKKGKLLSKIELDGKLHEATKLGKKAAKKM 285
>gi|51244454|ref|YP_064338.1| porphobilinogen deaminase [Desulfotalea psychrophila LSv54]
gi|50875491|emb|CAG35331.1| probable porphobilinogen deaminase [Desulfotalea psychrophila
LSv54]
Length = 313
Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 97/307 (31%), Positives = 156/307 (50%), Gaps = 7/307 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K IG+R S LA+ L I + TKGD+I +R++ +IG K
Sbjct: 1 MKNIINIGSRKSKLAMWQTNTIAGQLEAA----GMETRINSMETKGDKILDRSIVKIGSK 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-KD 120
G+FTEE+E +L +G D AVHSAKDM ++L + ++ A+ RE + DV +S + D
Sbjct: 57 GVFTEELEVQLATGITDIAVHSAKDMQSQLPEDFELIAFSQREKVNDVLVSDDKEIDLAD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
IGTSS+RR+A+L ++ + ++ RG ++TR+ K+ N A++LAYAG+KR++
Sbjct: 117 PTKKIRIGTSSVRRRAMLKQYYPHVQAVEMRGNLQTRIEKMRNGDCDALMLAYAGVKRME 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNP--KAQELVKVINHEDTWDSVNCERAFLA 238
+ +I + F P GQG I IE N + + + +N D+ + ERA+L
Sbjct: 177 NDDMIVMEFDTARFTPPVGQGCIAIEAATNLDPARREAIRTALNDADSESCLLAERAYLK 236
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+L+G C G A +G L + + DG NR +A +G + +YI
Sbjct: 237 KLEGGCSIPAFGLACLEGEELVMRAGLSSLDGTRILVKEVRANRSEAETLGNNLGEYILE 296
Query: 299 ISNKNVF 305
+ +
Sbjct: 297 NGGREML 303
>gi|261837684|gb|ACX97450.1| porphobilinogen deaminase [Helicobacter pylori 51]
Length = 306
Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N K ++ +N E++ + ERAF+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLERAFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|254577639|ref|XP_002494806.1| ZYRO0A10098p [Zygosaccharomyces rouxii]
gi|238937695|emb|CAR25873.1| ZYRO0A10098p [Zygosaccharomyces rouxii]
Length = 327
Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats.
Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 18/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RIG R S LA+ + + + K P + L T GD+ ++ L GG
Sbjct: 1 MSRR-IRIGGRQSQLAIVQSELVKHLIEQ--KFPDITCSVFALQTLGDQQQSKPLYSFGG 57
Query: 61 KGLFTEEIEKKLISGEID----CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
K L+T+E+E L + + VHS KDMPT L G ++ R D D +
Sbjct: 58 KALWTKELEDLLYDEDDNRKLDIIVHSLKDMPTTLPDGFELGGITERVDPSDCLVMPQGS 117
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILL 171
++L L SV+GTSS+RR A L R + RG + TR+ KL++ + I+L
Sbjct: 118 PHKNLDTLPAGSVVGTSSVRRSAQLKRKYPHLRFESIRGNLHTRIRKLDDPQNDYQCIIL 177
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+KRL I + + GQGA+ IE + + ++++ + H++T
Sbjct: 178 ASAGMKRLGLGYRITNTFDSSVMYHAVGQGALGIEIRAQDKEMKKILDAVCHKNTTVCCL 237
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRC----DA 285
ER + L+G C I + +T L+ GIV++ DGK E+++ D+
Sbjct: 238 AERQLMRSLEGGCSVPIGVGSRYDETTGYLHLRGIVVSVDGKQAVELNQELAINDVIRDS 297
Query: 286 INIGRDAAQYIRFISNKNVFN 306
I G+ A+ + + +
Sbjct: 298 IECGKLLAEKMISNGARKILE 318
>gi|172061376|ref|YP_001809028.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6]
gi|171993893|gb|ACB64812.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6]
Length = 304
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 161/293 (54%), Gaps = 5/293 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G
Sbjct: 1 MWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I+ ++++ED PP
Sbjct: 119 MLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE + + ++ T +V ER L GSC+ +A A +
Sbjct: 179 AAGQGALGIEIAAHRTDVAAWLAPLHDPKTALAVEAERMVSRALGGSCEVPLAAHAVWRA 238
Query: 257 STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306
LY G V +DG+ G DA+ +GR + + ++ N
Sbjct: 239 GELYLTGRVSTTDGQRVLTAEECGAVMTIADALALGRAVSDELEAQGALDIVN 291
>gi|20089471|ref|NP_615546.1| porphobilinogen deaminase [Methanosarcina acetivorans C2A]
gi|23821686|sp|Q8TT56|HEM3_METAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|19914376|gb|AAM04026.1| hydroxymethylbilane synthase [Methanosarcina acetivorans C2A]
Length = 317
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 152/302 (50%), Gaps = 9/302 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64
IGTR S LALA L + I + T GDR T+R L + GG G F
Sbjct: 1 MIIGTRGSQLALAQTENVARLLKER----GVETSIKIIKTSGDRFTDRPLHAVSGGVGAF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E++ +++GEID AVHS KDMPT +GL A L R+ D+ +++ +L +L
Sbjct: 57 VRELDDVMLAGEIDIAVHSMKDMPTIRPEGLPTVAVLKRDTPFDILLTYDGTTLDELPEQ 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++IGTSSLRR A + R+R D+ + RG I+TRL KL + ILLA AG++R+ E
Sbjct: 117 AIIGTSSLRRTAQIRRYRPDLITQELRGNIDTRLRKLKEGQYDGILLAKAGLERMGWEID 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
EIL+ + F PSP QG + + T +P+ + V ++H ++ ER ++EL G C
Sbjct: 177 G-EILSPDFFCPSPNQGTVAVVTR-ADPEIEAAVSGLDHTESRIVTEIERILISELGGGC 234
Query: 245 KSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+ I +A ++ VL+ DGK + + R+ + + K
Sbjct: 235 TTPIGSYAELTSDKQEIHIRAEVLSLDGKEDVRIDEFIPMLGGLEKARELGHRLVEMGGK 294
Query: 303 NV 304
+
Sbjct: 295 RL 296
>gi|167569219|ref|ZP_02362093.1| porphobilinogen deaminase [Burkholderia oklahomensis C6786]
Length = 280
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 102/270 (37%), Positives = 156/270 (57%), Gaps = 2/270 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274
+ +A A +G L+ G V +DG+
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGRRVL 280
>gi|254181386|ref|ZP_04887983.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655]
gi|184211924|gb|EDU08967.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655]
Length = 329
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAALMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ + +
Sbjct: 311 RAIVD 315
>gi|300857688|ref|YP_003782671.1| porphobilinogen deaminase [Corynebacterium pseudotuberculosis
FRC41]
gi|300685142|gb|ADK28064.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis
FRC41]
gi|302329983|gb|ADL20177.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis 1002]
Length = 296
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 7/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F IGTR S LA + R +L+ ++ + ++T GD + IG G+F
Sbjct: 2 TFTIGTRGSLLATTQSGHVRDALISQ----GYSAELSIVTTPGDVNM-APVERIG-VGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L+ G D AVHS KD+PT+ + R D RD ++ +L +L
Sbjct: 56 TQALRDVLVKGGCDIAVHSFKDLPTQRDPRFHLI-VPERADARDCLVARDGLTLAELPQG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C
Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A + L G V++ DG + G +A+ IG A + +
Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVLRATMTGGLSEAVAIGEKVAAKLIQDGAAEL 294
Query: 305 F 305
Sbjct: 295 L 295
>gi|169869297|ref|XP_001841215.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130]
gi|116497683|gb|EAU80578.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130]
Length = 351
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 18/321 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRTLTEIG 59
+ F + R S LA A + L ++ +ST GD+ ++ L +G
Sbjct: 9 RTFVVAARNSQLAQVQANSVLAQLEQLYASSDDPSKPKFTTSFMSTAGDKNQSQALYLMG 68
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114
GK L+T+E+E L E+D VHS KD+PT L +G + A L RED D +
Sbjct: 69 GKALWTKELEVALKDKEVDMLVHSLKDVPTTLPEGCLLGAILEREDPVDALVVKKGKEGV 128
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172
+SL+DL SV+GTSS+RR A L R + +D RG + TRL KL+ + A++LA
Sbjct: 129 WKSLEDLPEGSVVGTSSVRRVAQLKRKFPGLRFLDVRGNLNTRLAKLDAEDGPYAALILA 188
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ RL I LN + QGA+ +E ++ ++ E+++ + H T
Sbjct: 189 KAGLVRLGWGDRITADLNPPTLYHAVSQGALAVEIRDDDLESLEILQKLTHRGTDWKCRA 248
Query: 233 ERAFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEV---SRNGNRCDA 285
ERA L L+G C + + L G V + DG E + + +A
Sbjct: 249 ERALLRVLEGGCSVPVGVYTTLTKEGGDELLEITGCVTSLDGSEHVEESLKEKVTSVEEA 308
Query: 286 INIGRDAAQYIRFISNKNVFN 306
+G A+ + + +
Sbjct: 309 EAVGVKLAKVLMEKGATRILD 329
>gi|302559228|ref|ZP_07311570.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
gi|302476846|gb|EFL39939.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000]
Length = 319
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 155/317 (48%), Gaps = 17/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +K R+GTR S LA+A + + ++ V P + ++ ++T GD ++ L +IGG
Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVSQVTGRP---VELVEITTYGD-VSREHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L GE+D AVHS KD+PT L ++A RED RDV ++ A L D
Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELVVAAIPVREDPRDVVVARDALKLTD 116
Query: 121 LALHSVIGTSSLRRKALLLR----WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L D + RG ++TR+ + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARSHGMDFETVPIRGNVDTRIGYVTKGDLDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ + + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+
Sbjct: 177 NRVGRSEDVTDFLSVDTVLPAPGQGALAIECTADNAALIAELAELDDPLTRAAVTAERSL 236
Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287
LA L+ C + + A + G+V +DG ++S G A+
Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAAMA 296
Query: 288 IGRDAAQYIRFISNKNV 304
+GR+ A + +
Sbjct: 297 LGRELATGMLAQGAAGL 313
>gi|167580196|ref|ZP_02373070.1| porphobilinogen deaminase [Burkholderia thailandensis TXDOH]
Length = 286
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 2/274 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L G+C
Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHPTALAVEAERAVSRALGGNC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
+ +A A +G L+ G V +DG
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGARVLAAHA 284
>gi|114329088|ref|YP_746245.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1]
gi|114317262|gb|ABI63322.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1]
Length = 344
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 106/315 (33%), Positives = 155/315 (49%), Gaps = 10/315 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLSTKGDRITNRTLTEI 58
M P R+GTR SPLAL + L I ++T GDR+ +R L EI
Sbjct: 28 MHGLPLRVGTRASPLALVQTRAFLARLRSFCPILRDMEVFEEHQINTTGDRVQDRRLAEI 87
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GGKGLF +EI + L ID AVHS KD+ T+L G+ ++ L RED RD I +
Sbjct: 88 GGKGLFAKEIHEALADRRIDFAVHSLKDLETQLPPGIVLACTLKREDARDAIILPPGFTP 147
Query: 119 KDL-------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171
+++GTSS+RR+A L R D+ RG ++TRL KL + A LL
Sbjct: 148 PPPGDPFSVLQQGALVGTSSVRRQAQLAHARPDLRFATIRGNVQTRLAKLARGECDASLL 207
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++RL E+ +L+ E P+ QG + + ++ ++L+ I +
Sbjct: 208 ALAGLRRLDMEQAASVVLDTEIMVPAACQGIVGVTVREDDYALRDLLAGIEDREAKAVST 267
Query: 232 CERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
ERA L LDGSC++ I G A G L+ G+V A DG + G +A +G
Sbjct: 268 AERALLNLLDGSCRTPIGGHARILSGGVLHLTGLVAAEDGSFLLRRTLQGAVSEAEALGA 327
Query: 291 DAAQYIRFISNKNVF 305
+ + +R S ++F
Sbjct: 328 ELGRSLRADSPPDIF 342
>gi|56685543|dbj|BAD78765.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 6301]
Length = 300
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 5/291 (1%)
Query: 19 HAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78
+ L ++ P + +ST+GD I + L +IG KGLFT+E+E +++GE+D
Sbjct: 2 QTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGLFTKELEVAMLAGEVD 59
Query: 79 CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---ALHSVIGTSSLRRK 135
AVHS KD+PT+L +GL + RED D + H L +VIGTSSLRR
Sbjct: 60 FAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLETLPEGTVIGTSSLRRL 119
Query: 136 ALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195
A L + D RG + TRL KL+ + A++LA AG++RL I +++
Sbjct: 120 AQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRIHQLIPAAVSL 179
Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
+ GQGA+ IE +P+ EL+K + HE T ERAFL EL+G C+ I
Sbjct: 180 HAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLRELEGGCQVPIGVNTAIA 239
Query: 256 GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
TL G+V + DG+ +G D +G A ++ K + +
Sbjct: 240 DGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQGAKEILD 290
>gi|294782423|ref|ZP_06747749.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA]
gi|294481064|gb|EFG28839.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA]
Length = 301
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 148/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IGTR S LALA A ++SL + P I + T GD+ +
Sbjct: 1 MKKNIIIGTRGSILALAQANLVKTSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNAS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L
Sbjct: 59 LKSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E L+ E FPP+P QG + I+ N+ + + ++K I++E+ V ER F
Sbjct: 178 GMADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNENIAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ + F G + DGK V + I AA+ I+
Sbjct: 238 FDGGCHTPMGCYSQVDEDKIKFIGA-YSHDGKQ-IRVVIEDDLAKGKEIAHMAAEEIKAK 295
Query: 300 SNKN 303
NK
Sbjct: 296 INKG 299
>gi|257470630|ref|ZP_05634720.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185]
Length = 306
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 107/299 (35%), Positives = 152/299 (50%), Gaps = 6/299 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKGL 63
IG+R S LA+A + + L + P I + T GD N ++ K
Sbjct: 12 IVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSLKSF 69
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L +L
Sbjct: 70 FTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTLMELPA 129
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR+ EK
Sbjct: 130 GAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKRVGLEK 189
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F DG
Sbjct: 190 EITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSKIFDGG 249
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + + G + GI G+ + S + I + A I+ N
Sbjct: 250 CHTPMGCHCILDGDKITLTGIYF--KGENGYSASITEDAALGIKTAQKLADIIKEKIND 306
>gi|50305837|ref|XP_452879.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|55976379|sp|Q6CT60|HEM3_KLULA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49642012|emb|CAH01730.1| KLLA0C15147p [Kluyveromyces lactis]
Length = 327
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 152/319 (47%), Gaps = 16/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ RIG R S LA+ + + + + K ++ + T GD++ ++ L GGK
Sbjct: 3 SKETVRIGGRRSKLAVVQSEQVKVMIES--KFSHIECPLLSVHTLGDQVQSKPLYSFGGK 60
Query: 62 GLFTEEIEKKLISG---EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TA 115
++T+E+E L ID VHS KDMPT L G ++ R D D +
Sbjct: 61 AVWTKELEDLLYKDDESRIDLIVHSLKDMPTLLPDGFELGGITKRVDPTDALVMPIGSPY 120
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAY 173
SL +L SV+GTSS+RR A L R ++ RG I+TRL KL++ I+LA
Sbjct: 121 SSLSELPDGSVVGTSSVRRSAQLKRKFPNLKFESIRGNIQTRLAKLDDPETPYKCIVLAS 180
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R + I + N + + GQGA+ IE ++ K ++++K I T E
Sbjct: 181 AGLMRSGLDSRITQRFNADTMCYAVGQGALGIEIRKDDEKMKKILKEICDPSTTICCLAE 240
Query: 234 RAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDAIN 287
R+ L L+G C I + ST L GIV+ +G + E+ + R D+IN
Sbjct: 241 RSLLRTLEGGCSVPIGVVSNYDESTKVLTLKGIVINVEGTEWVEIEHKVTISNEREDSIN 300
Query: 288 IGRDAAQYIRFISNKNVFN 306
G++ A + K + +
Sbjct: 301 CGKELAAKLTQNGAKEILD 319
>gi|170085353|ref|XP_001873900.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651452|gb|EDR15692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 342
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 98/320 (30%), Positives = 145/320 (45%), Gaps = 15/320 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH------KIPPHNIVIIPLSTKGDRITNRT 54
M + F + +R S LA +S + P ++T GD+ ++
Sbjct: 1 MS-RSFILASRESQLAQIQTNSVLASFQALFAANADSSSPTPTFRASFMTTAGDKNQSQA 59
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
L +GGK L+T+E+E L +D VHS KD+PT L G + L RED D +
Sbjct: 60 LYLLGGKALWTKELEVALKEHHVDMLVHSLKDVPTTLPDGCVLGGILEREDPVDSLVVKH 119
Query: 115 ---AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAI 169
+SL +L SVIGTSS+RR A L R + +D RG + TRL KL+ A+
Sbjct: 120 GERWKSLDELPSGSVIGTSSVRRIAQLKRKYPHLKFMDVRGNLNTRLAKLDAPEGPYSAL 179
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AG+ RL I L + QGA+ IE ++ +A EL + + H +T
Sbjct: 180 ILAKAGLVRLGMGDRITLDLTPPTLFYAVSQGALGIEVRSDDVEALELCERLTHRETQLK 239
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAI 286
ERA L L+G C + + +G L G V A DG+ E + N DA
Sbjct: 240 CLAERACLRVLEGGCSVPVGVASQLEGGVLSLSGCVTAIDGESHVEHKLEEKVENAEDAE 299
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+G A+ + K + +
Sbjct: 300 KVGTKLAKILLDSGAKKILD 319
>gi|307595857|ref|YP_003902174.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429]
gi|307551058|gb|ADN51123.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429]
Length = 304
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S L+L + + V P +I + T GD I ++ L IG KG+F
Sbjct: 3 IRIATRGSRLSLIQTEIVMNMIRRVE--PNVRFDVIIVRTTGDVIQDKPLYAIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL--KDLAL 123
+E+ L+ E D AVHS KD+P+++ GL ++ + PR+ DV + L
Sbjct: 61 KEVNLALLRNEADIAVHSLKDLPSEISPGLVVAGFSPRDPPFDVLVVKDDYPSELMALPS 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GTSS+RR+A LL R DIS+ RG ++TR+NKL AI++A AG+ RL +
Sbjct: 121 GARVGTSSVRRRAFLLNVRRDISINVIRGNVDTRINKLIRGDYDAIVIAEAGLVRLINDV 180
Query: 184 V----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ + PP+PGQG I + + +L+ + ERAFL
Sbjct: 181 KSLNIKYTRISPDVLPPAPGQGIIAVVAREKDTDLVDLLNKASDPKARAEALAERAFLRT 240
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ G C + G A +G+ + F + +G+ V +G+ + +G +AA+ +
Sbjct: 241 IGGGCHVPVGGMAIHEGARMEFIAGMADLNGERKVLVKLSGSPSNPEELGVNAARELLKR 300
>gi|207092595|ref|ZP_03240382.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_AG0C1]
Length = 306
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 152/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++E+ PS GQGA+ +E N+ L + +N E + ER F+ L+G C
Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEKSAFCCRLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|288561002|ref|YP_003424488.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1]
gi|288543712|gb|ADC47596.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1]
Length = 289
Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats.
Identities = 94/293 (32%), Positives = 152/293 (51%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL R L + I + + TKGD+ITN L + KGLFT
Sbjct: 1 MIVGTRGSKLALVQTDYIRQCL---YNITGEEVEKNIIKTKGDKITNSQLYNMDSKGLFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ L+ E+D AVHS KD+PT+L + L+I A RE +V IS+ + +L S
Sbjct: 58 RELDNALLDEEVDFAVHSLKDVPTELNEDLEIVAVPIRESPNEVLISNYS--WSELEEGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRR+A D + RG +ETR+ K+ + + A ++A AG+ RL +K I
Sbjct: 116 TLGTSSLRREAFCKHHNKDFELKPIRGNVETRIEKVMDGQVDATIMAEAGLNRLGLQKYI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K + P+ GQGA+ + T + + +E ++ +NH + V E+ L E+ C+
Sbjct: 176 KAKFPTDYIMPAAGQGALAVMTR-KDSEHKETIRKLNHYFSHQEVLAEKTILEEIGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
I + K + L I+L +G+I ++ + +G+ +A +G + +
Sbjct: 235 WPIGAISGIKNNQLELKSILLDKNGEILYQKTLSGSIREAKEMGVQIGKEMIE 287
>gi|254196423|ref|ZP_04902847.1| porphobilinogen deaminase [Burkholderia pseudomallei S13]
gi|169653166|gb|EDS85859.1| porphobilinogen deaminase [Burkholderia pseudomallei S13]
Length = 329
Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A +G L+ G V +DG H +R DA+ +GR + +
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310
Query: 302 KNVFN 306
+ V +
Sbjct: 311 RAVVD 315
>gi|159041687|ref|YP_001540939.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167]
gi|189042877|sp|A8MDU3|HEM3_CALMQ RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|157920522|gb|ABW01949.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167]
Length = 305
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/295 (31%), Positives = 153/295 (51%), Gaps = 3/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S L+L +++ +K +I + T GD ++ L EIG KG+F
Sbjct: 3 IRIATRGSALSLKQTKIVMDRILEFNK--DVEFKLIIVKTTGDVDLSKPLYEIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E+ + ++ GE D AVHS KDMP ++ L + PR++ RD +S ++ L L+S
Sbjct: 61 REVNQAVLRGEADVAVHSLKDMPAQISNDLTLVMTPPRDNPRDALVSLRQYTVDTLPLNS 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSSLRR+ LL R D++V RG ++TR+ KLNN + A+++A AG++RL +
Sbjct: 121 IVGTSSLRRRGFLLSLRRDVTVKPIRGNVDTRIRKLNNGEYDALIMAAAGLERLSINANV 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E ++ E PP+PGQG I + + ++++ + E+T+ ERAFL+ + C
Sbjct: 181 SE-ISPELMPPAPGQGIIGVVARRDRDDLIKVLRRSSDEETFKEAAAERAFLSRIGAGCH 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ G A F V+ DG S + + GR AA+ + +
Sbjct: 240 VPLGGLALLDDGYFDFTYGVVDPDGVEKFINSTRIDARNPEEAGRVAAEDLLRNA 294
>gi|227541639|ref|ZP_03971688.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227182607|gb|EEI63579.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 290
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 13/301 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R +L+ ++ + ++T GD+ + + +IG G+F
Sbjct: 2 TLRIGTRGSKLATTQAGHVRDALIRA----GYDAELTIITTPGDKNLS-PVQKIG-VGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + + + EID AVHS KD+PT +GL Y RE + I+ +L L
Sbjct: 56 TQALREAMDRDEIDIAVHSCKDLPTGQPEGLATI-YPVRETPCEALIARDGLTLDQLPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 115 AKVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + P+P QG + +E+ + + + + S ERA L+ L C
Sbjct: 175 ATQVFDPTYLMPAPAQGILAVESRTHVDA----ISTLIDDHATLSAQAERAVLSTLQAGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A ++ G + A DG + G D + +G A+ +R + +
Sbjct: 231 TAPLAAYSTVSGDEITLTAGAFALDGSKQIVETATGT--DPVALGTSVAEKLRACGAEEI 288
Query: 305 F 305
Sbjct: 289 I 289
>gi|153952621|ref|YP_001398427.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei
269.97]
gi|166201501|sp|A7H4J7|HEM3_CAMJD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152940067|gb|ABS44808.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei
269.97]
Length = 307
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF
Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L
Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSTDAMLSQNYKDFLSLPKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGT+SLRRK LL R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K
Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQ 178
Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + ++ P+ QGA+ IE + + K EL+K +N E+ + ER F+A L+G
Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SIKDEKILELLKCLNDENALIETSIEREFIATLEG 237
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C+ I A G + ++ DG + R + D G A+ K
Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGEGLAKEFITKGAK 297
Query: 303 NVF 305
+
Sbjct: 298 ELL 300
>gi|241952386|ref|XP_002418915.1| hydroxymethylbilan synthase, putative; porphobilinogen deaminase,
putative; pre-uroporphyrinogen synthase, putative
[Candida dubliniensis CD36]
gi|223642254|emb|CAX44222.1| hydroxymethylbilan synthase, putative [Candida dubliniensis CD36]
Length = 340
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 146/314 (46%), Gaps = 19/314 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T+E
Sbjct: 16 IGGRKSKLAVVQSEIVKKAIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73
Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
+E L+ ++D VHS KDMPT L + ++ RED RD + +SLK
Sbjct: 74 LEILLLDSVDEFPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLK 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
DL +++GTSS+RR + L++ + RG I+TRLNKL+ ++LA AG+
Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLI 193
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I ++D + GQGA+ IE + + ++K I ER+ +
Sbjct: 194 RLGLGHRITSY--LDDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLM 251
Query: 238 AELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292
L+G C + + L GI+++ DG + E D +G +
Sbjct: 252 RYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTVSIEDQVIKRITCDEDCEQVGIEL 311
Query: 293 AQYIRFISNKNVFN 306
++ K + +
Sbjct: 312 GDKLKAKGAKEILD 325
>gi|153953354|ref|YP_001394119.1| porphobilinogen deaminase [Clostridium kluyveri DSM 555]
gi|146346235|gb|EDK32771.1| HemC [Clostridium kluyveri DSM 555]
Length = 305
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 109/293 (37%), Positives = 152/293 (51%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FRI TR S LAL L K + + T+GDR + +L +IGGKG+F
Sbjct: 18 FRIATRKSKLALVQTDYVIDLLALKFK---MQCEKVLIRTEGDRKLDVSLDKIGGKGVFV 74
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL +
Sbjct: 75 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 134
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I
Sbjct: 135 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 194
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E N +F P+ GQGAI +E N + + I++ED V ER+FL +L G C
Sbjct: 195 TEYFNPFEFIPAVGQGAIGVEIL-KNSEYASTLGKIDNEDIRMGVEAERSFLKKLQGDCH 253
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+ + ++ +G L G + G + G++ D I +G + I
Sbjct: 254 TPVGAYSVIEGEILNITG-IFQV-GNKLIKKDVCGDKWDYIALGESLGEKIIS 304
>gi|73666979|ref|YP_302995.1| porphobilinogen deaminase [Ehrlichia canis str. Jake]
gi|123773372|sp|Q3YSA8|HEM3_EHRCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72394120|gb|AAZ68397.1| Porphobilinogen deaminase [Ehrlichia canis str. Jake]
Length = 298
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 108/295 (36%), Positives = 157/295 (53%), Gaps = 5/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA E + L P NI ++ + T GD + IGGKGLF
Sbjct: 3 IRIGTRGSVLALAQTLEVTNLL--NRYFPEINIQVVKIKTSGDINNKVPINTIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ G++D AVHS KD+P GL I L R DVF+S QS+K L +++
Sbjct: 61 KEIEEALLIGKVDLAVHSVKDIPAFYCDGLIIPCVLKRSSPYDVFVSSKYQSIKSLPINA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RRK L R D+ VI RG I+TR+ K + + I+LA AG+ R+ K VI
Sbjct: 121 TVGTSSIRRKVQLNYLRPDLQVIPVRGNIDTRILKSDIGEFDGIVLAEAGLIRINKCNVI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KE+L+ + + GQGAIC++ ++ +KV+N ++ V ER+FL ++GSC
Sbjct: 181 KEVLDSKIMLSAVGQGAICVQCRADDYNIINKIKVLNCHKSYVCVIAERSFLKTINGSCD 240
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A Y T+Y ++ K C+A G D + +
Sbjct: 241 TPLAALAQYVDSDTIYMSCMLSNE--KEMVFSDCYFKECNAEESGIDMGKKLINE 293
>gi|219853983|ref|YP_002471105.1| hypothetical protein CKR_0640 [Clostridium kluyveri NBRC 12016]
gi|254800246|sp|B9DZL6|HEM3_CLOK1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219567707|dbj|BAH05691.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 290
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 110/298 (36%), Positives = 153/298 (51%), Gaps = 9/298 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M FRI TR S LAL L K + + T+GDR + +L +IGG
Sbjct: 1 MS---FRIATRKSKLALVQTDYVIDLLALKFK---MQCEKVLIRTEGDRKLDVSLDKIGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F ++IEK LI AVHS KDMP +LL +I A RED+RDVFIS D
Sbjct: 55 KGVFVKDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLD 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL
Sbjct: 115 LPKGAVIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++I E N +F P+ GQGAI +E N + + I++ED V ER+FL +L
Sbjct: 175 MSEIITEYFNPFEFIPAVGQGAIGVEIL-KNSEYASTLGKIDNEDIRMGVEAERSFLKKL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C + + ++ +G L G + G + G++ D I +G + I
Sbjct: 234 QGDCHTPVGAYSVIEGEILNITG-IFQV-GNKLIKKDVCGDKWDYIALGESLGEKIIS 289
>gi|326391319|ref|ZP_08212859.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200]
gi|325992648|gb|EGD51100.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200]
Length = 299
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 9/300 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGK
Sbjct: 1 MKKVIKVGTRSSELALKQTAMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL
Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + T+ + ER L
Sbjct: 179 ENIITEYFPPDVVVPAPCQGILSVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAF 238
Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+C+ +A + + + G + + +
Sbjct: 239 GVNCRQPFGAYAQYRKEEDEEKINIKVAYQKEN--KLLKSEATGLIEETDKMIEKLIEEF 296
>gi|108562665|ref|YP_626981.1| porphobilinogen deaminase [Helicobacter pylori HPAG1]
gi|123073837|sp|Q1CUR5|HEM3_HELPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|107836438|gb|ABF84307.1| porphobilinogen deaminase [Helicobacter pylori HPAG1]
Length = 306
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 152/302 (50%), Gaps = 5/302 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT
Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L +
Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184
+GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ +
Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ ++++ PS GQGA+ +E N+ L + +N E + ER F+ L+G C
Sbjct: 181 YRKAFSVKEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEKSAFCCRLEREFIKGLNGGC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I A G + ++ +GK + G++ A ++ ++ + K +
Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299
Query: 305 FN 306
Sbjct: 300 LE 301
>gi|68483293|ref|XP_714388.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|68483380|ref|XP_714346.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|10720013|sp|O94048|HEM3_CANAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3859661|emb|CAA21999.1| Porphobilinogen deaminase [Candida albicans]
gi|46435905|gb|EAK95277.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|46435949|gb|EAK95320.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314]
gi|238883889|gb|EEQ47527.1| porphobilinogen deaminase [Candida albicans WO-1]
Length = 340
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 19/314 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IG R S LA+ + + + D P + I+ LST GD++ + L GGK L+T+E
Sbjct: 16 IGGRKSKLAVVQSEIVKKVIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73
Query: 68 IEKKLISGEI-----DCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
+E L+ D VHS KDMPT L + ++ RED RD + +SLK
Sbjct: 74 LEILLLDSVDEFPKLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLK 133
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177
DL +++GTSS+RR + L++ + RG I+TRLNKL+ ++LA AG+
Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLI 193
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I ++D + GQGA+ IE + + ++K I ER+ +
Sbjct: 194 RLGLGHRITSY--LDDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLM 251
Query: 238 AELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292
L+G C + + L GI+++ DG + E D +G +
Sbjct: 252 RYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTVSIEDEVIKRITCDEDCEQVGIEL 311
Query: 293 AQYIRFISNKNVFN 306
++ K + +
Sbjct: 312 GDKLKAKGAKEILD 325
>gi|167561971|ref|ZP_02354887.1| porphobilinogen deaminase [Burkholderia oklahomensis EO147]
Length = 278
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 103/268 (38%), Positives = 156/268 (58%), Gaps = 2/268 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L
Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SV+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 SVVGTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+ +A A +G L+ G V +DG+
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGRR 278
>gi|303239240|ref|ZP_07325769.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2]
gi|302593285|gb|EFL63004.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2]
Length = 293
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 148/298 (49%), Gaps = 9/298 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K R+G+R S LA+ + ++ +I + T GD+I + TL +IGGKG
Sbjct: 1 MKTIRVGSRDSKLAIIQSQMVMDAIKSY--DSNIKTELITMKTTGDKILDVTLDKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ LI+GE+D VHS KDMP ++ + L + A RED RDV I Q+ D
Sbjct: 59 LFVKELDEALINGEVDITVHSYKDMPMQIDEDLPVVALSTREDERDVLILPKGQTFSDKP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+G SS RR L ++ RG + TRL KL++ + AI+LA AGIKRL E
Sbjct: 119 ----VGCSSERRTMQLKEL-GFENIKPLRGNVITRLKKLDDGEYSAIVLAAAGIKRLGLE 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I +++ P+ QG I ++ ++ + + ERAF+ L+G
Sbjct: 174 ERISRYFTVDEIMPAACQGIIAVQARKGED--TSYLRCFHSYASQVISEAERAFITALNG 231
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
C S +A +AY L G+ + + KI S++G A +G + A ++
Sbjct: 232 GCSSPVAAYAYLDKDILVLNGLYVDKENKIAVRGSQHGTPAQAAVLGEELANRLKERG 289
>gi|42520403|ref|NP_966318.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410142|gb|AAS14252.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 292
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 3 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L +
Sbjct: 61 KEIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 121 TIATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 178 TEVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + L+ ++ + GK + R DA +G DA ++
Sbjct: 238 TPLAALAEYVSENMLHLRCMLAS--GKNIYFTERTSFIEDAEKMGMDAGLELKSK 290
>gi|158317872|ref|YP_001510380.1| porphobilinogen deaminase [Frankia sp. EAN1pec]
gi|158113277|gb|ABW15474.1| porphobilinogen deaminase [Frankia sp. EAN1pec]
Length = 354
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 40/335 (11%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P R+GTR S LA A + + +L P + ++P+ T GD+ +++IGG G
Sbjct: 17 RRPLRLGTRRSALARAQSEKVAETLRTRLSRP---VELVPIVTAGDQSQ-VAISQIGGTG 72
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L++GEID AVHS KD+PT GL ++A R D RDV +S + + L +L
Sbjct: 73 VFVSALRDALLAGEIDLAVHSLKDLPTATPDGLVLAAVPRRADTRDVLVSPSGRRLSELG 132
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT S RR A LL V+ RG ++TR+ K + + A++LA+AG+ RL +
Sbjct: 133 PGARVGTGSPRRAAQLLALGHGFEVVPIRGNVDTRIKKAIDGEVDAVVLAHAGLDRLDRL 192
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI--------------------N 222
+ EI++ E P+PGQGA+ IE +
Sbjct: 193 DAVTEIISPEVMLPAPGQGALAIECVRTPAGGGPAHDQTGPEAGRGFDEGLAELLRFVLD 252
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYC------------KG----STLYFYGIVL 266
+ +V ERAFLA ++ C + + A+ + +V
Sbjct: 253 DATSSVAVRAERAFLAGIEAGCTAPVGALAHVLPGTDARLVAGGDDAPAVGEIRLRAVVA 312
Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
A DG G+ D +G+ A +
Sbjct: 313 APDGGRVLRRELTGSAVDPEALGQRLADELLSAGA 347
>gi|212695966|ref|ZP_03304094.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM
7454]
gi|212677089|gb|EEB36696.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM
7454]
Length = 318
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 4/298 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IG+R S LAL A + L I+ +STKGDRI +R + ++ KG+F
Sbjct: 2 IKIGSRASKLALIQANMVKDILEK----EGLEAQIVEISTKGDRIRDRKIDQLNSKGVFV 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D ++
Sbjct: 58 REIEEKLLDKTIDIAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDVFKKMDDLNNA 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR S+I RG +ETR+ K+ + ++LA +G+ R + I
Sbjct: 118 LVGTGSNRRVCQGKNHFSNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ F PSP QG + IE + K E+ K + E T + ERAF EL C
Sbjct: 178 NFDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCS 237
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ + F + G + + +GN + I++ + A+ ++ S K
Sbjct: 238 TPMGIFTEIDHDKITLTGSMAFDKDDRINYERVSGNISERIHLAQKLARTLKKKSYKK 295
>gi|153814114|ref|ZP_01966782.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756]
gi|317499921|ref|ZP_07958157.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087856|ref|ZP_08336781.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848510|gb|EDK25428.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756]
gi|316898638|gb|EFV20673.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330409551|gb|EGG88992.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 307
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 148/304 (48%), Gaps = 9/304 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIG+R S LA+ A + + + + II + T GD+I +R+L +GGKGLF
Sbjct: 5 IRIGSRESRLAVKQAEIIKDQIRRCDQT--ILVEIITMKTTGDKILDRSLESVGGKGLFV 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L G ID AVHS KDMP + I AY RED RDV I + + + S
Sbjct: 63 KELDQALADGRIDLAVHSLKDMPMEESSEFPILAYSRREDPRDVLIYKSEKKEQGTEEGS 122
Query: 126 V-------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ IGTSS RR + + + RG I+TRL+KLN + A +LA AG+KR
Sbjct: 123 ILTKTGAVIGTSSKRRMIQIQKLYPNAVFQGIRGNIQTRLSKLNKEEYDAAVLAAAGVKR 182
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L E VI ++++ P+ GQG + ++ K + ++ + + ER+F+
Sbjct: 183 LNMEAVIGRYFSVDEVIPAAGQGILAVQGRKEFLKDTVWRQYVDDKKSRVQALAERSFIR 242
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
LDG C S A +A KG+ L G+ + DA ++G A ++
Sbjct: 243 VLDGGCTSPSAAYAKVKGNELELTGLYYNEKSGQYFVKKAASYIEDASSLGERLALTMKK 302
Query: 299 ISNK 302
+
Sbjct: 303 QFGE 306
>gi|15607651|ref|NP_215024.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Rv]
gi|31791692|ref|NP_854185.1| porphobilinogen deaminase [Mycobacterium bovis AF2122/97]
gi|121636428|ref|YP_976651.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660279|ref|YP_001281802.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|148821712|ref|YP_001286466.1| porphobilinogen deaminase [Mycobacterium tuberculosis F11]
gi|167970665|ref|ZP_02552942.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|215402275|ref|ZP_03414456.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|215410034|ref|ZP_03418842.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|215425741|ref|ZP_03423660.1| porphobilinogen deaminase [Mycobacterium tuberculosis T92]
gi|215429335|ref|ZP_03427254.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|215444616|ref|ZP_03431368.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|218752147|ref|ZP_03530943.1| porphobilinogen deaminase [Mycobacterium tuberculosis GM 1503]
gi|219556337|ref|ZP_03535413.1| porphobilinogen deaminase [Mycobacterium tuberculosis T17]
gi|224988900|ref|YP_002643587.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172]
gi|254230857|ref|ZP_04924184.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C]
gi|254549461|ref|ZP_05139908.1| porphobilinogen deaminase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185382|ref|ZP_05762856.1| porphobilinogen deaminase [Mycobacterium tuberculosis CPHL_A]
gi|260199512|ref|ZP_05767003.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|260203666|ref|ZP_05771157.1| porphobilinogen deaminase [Mycobacterium tuberculosis K85]
gi|289441896|ref|ZP_06431640.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|289446056|ref|ZP_06435800.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A]
gi|289552764|ref|ZP_06441974.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605]
gi|289568434|ref|ZP_06448661.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17]
gi|289573100|ref|ZP_06453327.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85]
gi|289744220|ref|ZP_06503598.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|289749005|ref|ZP_06508383.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92]
gi|289752545|ref|ZP_06511923.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|289756587|ref|ZP_06515965.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|289760632|ref|ZP_06520010.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503]
gi|294996019|ref|ZP_06801710.1| porphobilinogen deaminase [Mycobacterium tuberculosis 210]
gi|297632998|ref|ZP_06950778.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN 4207]
gi|297729974|ref|ZP_06959092.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN R506]
gi|298523991|ref|ZP_07011400.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|313657302|ref|ZP_07814182.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN V2475]
gi|54037281|sp|P64337|HEM3_MYCBO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|54041348|sp|P64336|HEM3_MYCTU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158512923|sp|A1KFY6|HEM3_MYCBP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158513358|sp|A5TZP0|HEM3_MYCTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800256|sp|C1AKJ0|HEM3_MYCBT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3261607|emb|CAB00957.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE
SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE)
[Mycobacterium tuberculosis H37Rv]
gi|31617278|emb|CAD93385.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE
SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE)
[Mycobacterium bovis AF2122/97]
gi|121492075|emb|CAL70538.1| Probable porphobilinogen deaminase hemC [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124599916|gb|EAY58926.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C]
gi|148504431|gb|ABQ72240.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra]
gi|148720239|gb|ABR04864.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis F11]
gi|224772013|dbj|BAH24819.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172]
gi|289414815|gb|EFD12055.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46]
gi|289419014|gb|EFD16215.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A]
gi|289437396|gb|EFD19889.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605]
gi|289537531|gb|EFD42109.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85]
gi|289542188|gb|EFD45836.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17]
gi|289684748|gb|EFD52236.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987]
gi|289689592|gb|EFD57021.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92]
gi|289693132|gb|EFD60561.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054]
gi|289708138|gb|EFD72154.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503]
gi|289712151|gb|EFD76163.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85]
gi|298493785|gb|EFI29079.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A]
gi|326902339|gb|EGE49272.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis W-148]
gi|328457228|gb|AEB02651.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
4207]
Length = 309
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GDR + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAATVRDALIA----GGHSAELVTISTEGDRSM-APIASLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + S
Sbjct: 56 TALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G+ A +G A +
Sbjct: 236 APVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|15839903|ref|NP_334940.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551]
gi|253797442|ref|YP_003030443.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
1435]
gi|254363472|ref|ZP_04979518.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str.
Haarlem]
gi|308231570|ref|ZP_07412948.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001]
gi|308369414|ref|ZP_07417699.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002]
gi|308370431|ref|ZP_07421471.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003]
gi|308371690|ref|ZP_07425840.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004]
gi|308372913|ref|ZP_07430371.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005]
gi|308374024|ref|ZP_07434556.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006]
gi|308375179|ref|ZP_07442991.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007]
gi|308376421|ref|ZP_07438780.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008]
gi|308377443|ref|ZP_07479182.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009]
gi|308378656|ref|ZP_07483377.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010]
gi|308379797|ref|ZP_07487609.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011]
gi|308395586|ref|ZP_07492111.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012]
gi|13880040|gb|AAK44754.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551]
gi|134148986|gb|EBA41031.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str.
Haarlem]
gi|253318945|gb|ACT23548.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN
1435]
gi|308216828|gb|EFO76227.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001]
gi|308327689|gb|EFP16540.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002]
gi|308332040|gb|EFP20891.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003]
gi|308335827|gb|EFP24678.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004]
gi|308339432|gb|EFP28283.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005]
gi|308343307|gb|EFP32158.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006]
gi|308347203|gb|EFP36054.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007]
gi|308351144|gb|EFP39995.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008]
gi|308355775|gb|EFP44626.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009]
gi|308359835|gb|EFP48686.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010]
gi|308363637|gb|EFP52488.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011]
gi|308367292|gb|EFP56143.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012]
gi|323721187|gb|EGB30249.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis
CDC1551A]
Length = 312
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H+ ++ +ST+GDR + +G G+FT
Sbjct: 5 IRIGTRGSLLATTQAATVRDALIA----GGHSAELVTISTEGDRSM-APIASLG-VGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + S
Sbjct: 59 TALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + +
Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ C
Sbjct: 179 TETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCS 238
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G+ A +G A +
Sbjct: 239 APVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAEL 298
Query: 297 RFISNKNV 304
+ + +
Sbjct: 299 FELGAREL 306
>gi|326329564|ref|ZP_08195886.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1]
gi|325952560|gb|EGD44578.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1]
Length = 336
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 12/312 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60
+ R+GTR S LA+ + L H + ++ + + GDR N LT
Sbjct: 1 MRTLRLGTRRSQLAVTQSTLVAEMLRAQ----GHIVELVEIVSDGDRTQASNTPLTSANS 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L + EID AVHS KD+PT +G+++ A LPRED RDV ++ +L +
Sbjct: 57 TGVFVSALRDALHAKEIDLAVHSLKDLPTYPEEGIELVAILPREDPRDVIVARDGLTLGE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GT S RR A + + + RG ++TR+ K+ + + A++LA AG+ R+
Sbjct: 117 LPPGSRVGTGSPRRVAQIKALGLGLELAGIRGNVDTRIGKVRSGEFDAVVLARAGLARID 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + E+L+ P+PGQGA+ +E + ++++ ++ T +V ERA LA
Sbjct: 177 RLDEVTEVLDPIQVLPAPGQGALAVECREGDADADVRKILTSLDDAPTRAAVEAERAVLA 236
Query: 239 ELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
L+G C + I A +G L+ + L+ DG + +S +G DA +GR A+
Sbjct: 237 TLEGGCAAPIGTLADVVEGEEGPELWVRAVALSLDGSLSVRLSASGPLDDAAGVGRRLAE 296
Query: 295 YIRFISNKNVFN 306
+ ++ +
Sbjct: 297 EMLAEGAADLTD 308
>gi|227487191|ref|ZP_03917507.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092849|gb|EEI28161.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC
51867]
Length = 290
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 13/301 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA A R +L+ ++ + ++T GD+ + + +IG G+F
Sbjct: 2 TLRIGTRGSKLATTQAGHIRDALIRA----GYDAELTIITTPGDKNLS-PVQKIGI-GVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + + + EID AVHS KD+PT +GL Y RE + I+ +L L
Sbjct: 56 TQALREAMDRDEIDIAVHSCKDLPTGQPEGLATI-YPVRETPCEALIARDGLTLDQLPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ +
Sbjct: 115 AKVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDE 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ + P+P QG + +E+ + + + + S ERA L+ L C
Sbjct: 175 ATQVFDPTYLMPAPAQGILAVESRTHVDA----ISTLIDDHATLSAQAERAVLSTLQAGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A ++ G + A DG + G D + +G A+ +R + +
Sbjct: 231 TAPLAAYSTVSGDEITLTAGAFALDGSKQIVETATGT--DPVALGTTVAEKLRARGAEEI 288
Query: 305 F 305
Sbjct: 289 I 289
>gi|310780153|ref|YP_003968485.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926]
gi|309749476|gb|ADO84137.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926]
Length = 303
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 151/301 (50%), Gaps = 6/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEI 58
M+K IGTR S LA+A + RS L + + P I + T GD N ++
Sbjct: 2 MKKNKVVIGTRGSLLAVAQSKHVRSMLKEKY--PEIEFEIKEIVTTGDVDLRTNWNNSDT 59
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K LFT+EIEK+L+ G I AVHS KDMP + GL + RED RDV +S + L
Sbjct: 60 SLKSLFTKEIEKELLDGTIHLAVHSMKDMPAESPAGLICGSIPEREDYRDVVVSKSNLKL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L SV+GTSSLRR + R D+ + RG I TRL KL AI+LA AG+KR
Sbjct: 120 SELPEGSVVGTSSLRRTMAVKEMRPDLVIEPIRGNIHTRLRKLKEENFDAIVLAAAGLKR 179
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E I + L + P+P QGA+CI+ ++ +E++ I ++ + V ER F
Sbjct: 180 VGLENEITQYLETHEMMPAPAQGALCIQCKEDDLFIREILSSITEKEVEEVVEIEREFSR 239
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + A G + G+ ++ ++ G R + ++ + A IR
Sbjct: 240 IFDGGCHTPMGCSAEIIGDEICLKGMYCHE--EVVYKGEVTGKREEGKSLAQKLAGIIRG 297
Query: 299 I 299
Sbjct: 298 Q 298
>gi|292670850|ref|ZP_06604276.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541]
gi|292647471|gb|EFF65443.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541]
Length = 271
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/264 (35%), Positives = 151/264 (57%), Gaps = 1/264 (0%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++TKGDRI + L +IGGKGLFT+E+E+ +++G+ID AVHS KDMPT++ KGL I A
Sbjct: 1 MTTKGDRILDAPLAKIGGKGLFTKELEQAMLAGQIDIAVHSLKDMPTEIPKGLIIGAITK 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
R D D F+S S+++L + + +GTSSLRR+A LL R D+ ++D RG + TRL KL+
Sbjct: 61 RLDPGDAFVSVNYTSIEELPIGAKVGTSSLRRRAQLLAVRPDLQLLDLRGNVNTRLAKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+KRL I+ IL+ P+ GQG + IE ++ + ++ ++
Sbjct: 121 AGDFDAIILAAAGLKRLGLGNRIRSILSQRMMLPAVGQGTLAIECRADDTRILSVIDFLH 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN 281
+ + ERAFL ++G C+ + +A + L+ ++ + DG G+
Sbjct: 181 DRNMSAAAMAERAFLCRVEGGCQIPVGVYADLKEDGLLHVDAMIASVDGMRVCRSRCTGS 240
Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305
A +G A+ + + +
Sbjct: 241 AERAEELGISLAEELLDAGGREIL 264
>gi|256397425|ref|YP_003118989.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928]
gi|256363651|gb|ACU77148.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928]
Length = 317
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 153/305 (50%), Gaps = 7/305 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ R+GTR S LALA + +L + ++ ++T GD L+ IGG G
Sbjct: 16 ERALRLGTRASTLALAQSGMVAEALTAAT---GRAVELVHVTTYGDTSR-EALSVIGGTG 71
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + + +G++D AVHS KD+PT +GL ++A R + D ++ L DL
Sbjct: 72 VFVNALREAIYAGDVDFAVHSLKDLPTAAPEGLHLAAITERAAVNDALVARDGLKLADLP 131
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GT + RR ALL R D+ ++ RG ++TR+N + + A+++A AG++RL +
Sbjct: 132 AGAKVGTGAARRMALLKMIRPDLEIVPIRGNVDTRVNHVRSGDLDAVVVALAGLQRLGRA 191
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ E+ + PSPGQGA+ +E +P+ EL+ V++ T +V ER LA L+
Sbjct: 192 EEATEVFGPDVILPSPGQGALAVEC--KDPELAELLAVLDSPLTRAAVVAERTMLAVLEA 249
Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C + + G A + L G+V G +S G + +GR AQ +
Sbjct: 250 GCSAPVGGHAIALDDNVLSLTGVVATVSGSRGLRLSHAGAVSEPEALGRRVAQALLADGA 309
Query: 302 KNVFN 306
+
Sbjct: 310 AELME 314
>gi|239946738|ref|ZP_04698491.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921014|gb|EER21038.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 350
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 105/350 (30%), Positives = 161/350 (46%), Gaps = 54/350 (15%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL + P N I+P+ T GD I N+ L +IGG
Sbjct: 1 MTN-SIRIGTRKSPLALIQTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L R+D RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAVLERKDPRDVFVCLNYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIG+S++RRKA + + R D+ FRG +++R+ KL + A +LAYAG+KRL
Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKATVFRGNVDSRIKKLMTGEVDATILAYAGLKRLG 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 178 AFNPEYCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHIPTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFAYCKGS--------------------------------------TLYF 261
LD +C++ IA ++ + L
Sbjct: 238 LDANCRTPIAAYSKYLDADPRHLSKLAYREEFEENTERSTAAYKSVREDASTGLTYKLSL 297
Query: 262 YG------------IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
++ DG + N + G AA+ +
Sbjct: 298 EVEFGKMSNIQTDFMLGNLDGSKITFHTETTNIKTSKEAGIKAAKMMLEQ 347
>gi|255534181|ref|YP_003094552.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10]
gi|255340377|gb|ACU06490.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10]
Length = 311
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 94/304 (30%), Positives = 157/304 (51%), Gaps = 9/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IGTR SPLAL A E L + + H I P+ +KGD+ ++ L +G
Sbjct: 8 SMRSIKIGTRNSPLALWQAREVARHLQNNN----HTTDITPIISKGDKNLSQPLYTLGIT 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT++++ L++ E+D AVHS KD+PT+L + ++I A L R+ +DV + + +
Sbjct: 64 GIFTKDLDIALLNNEVDIAVHSLKDIPTQLPENVEIIAVLQRDYPQDVLVRKKDAATLE- 122
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
I TSSLRR+A L+ D RG ++TRL KL N A + + A I+R+
Sbjct: 123 LHQLKIATSSLRRRAFWLKEFPGTEFSDIRGNVQTRLTKLEENDFDATMFSLAAIERMG- 181
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + ++ P+P QG + + N+P+ +EL K INH +T ++ ER+FL+ L+
Sbjct: 182 --LSVDYEHLPLMIPAPAQGVVAVCARSNDPEIKELFKEINHRETRICIDIERSFLSTLE 239
Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C + I FA + F G + + DG+ E + + G+ A+ I
Sbjct: 240 GGCTAPIGAFAEINDLGEVRFTGRICSLDGQNCIETDEIFAWNEHDDFGKILAEKILQNG 299
Query: 301 NKNV 304
+ +
Sbjct: 300 GREL 303
>gi|184200499|ref|YP_001854706.1| porphobilinogen deaminase [Kocuria rhizophila DC2201]
gi|183580729|dbj|BAG29200.1| porphobilinogen deaminase [Kocuria rhizophila DC2201]
Length = 314
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 151/313 (48%), Gaps = 13/313 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M F +GTR S LA+ + ++ + ++ + T+GD + L+++GG
Sbjct: 1 MSGAVFTVGTRGSQLAMTQSRWAAEAVSRAG---GIDHELVTVRTEGD-VLTGPLSQMGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + +++ G +D AVHS KD+PT ++GL+I A RED RD + +L +
Sbjct: 57 TGVFATALRSQVLDGRVDLAVHSLKDLPTAPVEGLRIVALPEREDPRDALCARDGLTLAE 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---NNNKAHAILLAYAGIK 177
L + +GT S RR A L R D+ ++D RG + TRLN++ + A++LA +G+K
Sbjct: 117 LPEGAAVGTGSPRRVAQLRALRPDLRIVDIRGNVGTRLNRVAPADPGDLDAVVLAASGLK 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP---KAQELVKVINHEDTWDSVNCER 234
RL E I E L+ P+PGQGA+ +E ++ ++H T +V ER
Sbjct: 177 RLGLEGRITEYLDPHVMLPAPGQGALALEVSARLDPSGALMRGLEAVDHLPTRLAVTAER 236
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRD 291
A LA+L+ C + + FA G L +V DG S + +A GR
Sbjct: 237 AVLAQLEAGCAAPVGTFARVAGDVLELDVVVANPDGSEVMRRSESVPAPSVEEAEAFGRR 296
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 297 IADDLLAQGADRL 309
>gi|124268186|ref|YP_001022190.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1]
gi|124260961|gb|ABM95955.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1]
Length = 317
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 154/316 (48%), Gaps = 27/316 (8%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
I TR S LAL A R+ L P + ++ ++T+GD+I +RTL+++GGKGLF +
Sbjct: 9 VIATRESRLALWQAEHVRALLGSRLVEP---VELLGMTTRGDQILDRTLSKVGGKGLFVK 65
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E+E L +G+ AVHS KD+P L G ++A L RED RD ++S L L +V
Sbjct: 66 ELETALEAGDAHLAVHSLKDVPMDLPAGFVLAAVLEREDPRDAWVSPRYADLAALPAGAV 125
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR + L R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I+
Sbjct: 126 VGTSSLRRLSQLRARRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLAERIR 185
Query: 187 EILNIEDFPPSPGQGAICIE----THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + P+ GQGA+ IE +P ++ + HE +W +V+ ERA L G
Sbjct: 186 SVFEADAMIPAAGQGALGIELRADAPERHPALWAALRALTHEPSWLAVHAERAVSRALGG 245
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAI------------NIG 289
SC +A A + L + + A +G
Sbjct: 246 SCSMPLAAHAQWQADGRLVLRAALGSV-------AEAAPALVHAEAGAAVADTAAAEALG 298
Query: 290 RDAAQYIRFISNKNVF 305
AQ +R +
Sbjct: 299 LAVAQQLRQRGGDALL 314
>gi|308182412|ref|YP_003926539.1| porphobilinogen deaminase [Helicobacter pylori PeCan4]
gi|308064597|gb|ADO06489.1| porphobilinogen deaminase [Helicobacter pylori PeCan4]
Length = 306
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 157/307 (51%), Gaps = 7/307 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
MEK IG+R S LAL A + L I + T GD+I + L +IGG
Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECS---MESEIQIVKTTGDKILDAPLNKIGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L
Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACTTKRADVRDTFLSMKFPDLMS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+
Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLE 175
Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ ++ ++E+ PS GQGA+ +E + K ++ +N E++ + ERAF+
Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLERAFIKG 234
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+G C+ I A G + ++ +GK + G++ A ++ ++ +
Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQS 294
Query: 300 SNKNVFN 306
K +
Sbjct: 295 GAKEILE 301
>gi|328350818|emb|CCA37218.1| hydroxymethylbilane synthase [Pichia pastoris CBS 7435]
Length = 376
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 17/316 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LA+ A R ++ + P ++ +ST GD++ N+ L GGK L+T
Sbjct: 47 LKLGSRKSALAIIQAEIVRQLILKEY--PELETKLVSVSTLGDQVQNKALFTFGGKSLWT 104
Query: 66 EEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
+E+E L+ +ID VHS KDMPT L ++ + RED RD + +S
Sbjct: 105 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 164
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAG 175
L DL +V+GTSS+RR A LL+ + RG ++TRL KL++ + +LLA AG
Sbjct: 165 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 224
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R + I LN + S GQGA+ +E + + + + I H T ERA
Sbjct: 225 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 284
Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290
L L+G C I T L +V++ +G+ S A + G
Sbjct: 285 LLRYLEGGCSVPIGVSTIYSEDTKELTMNSLVVSCNGRDSVTESMTEVVTTEEQAEDFGE 344
Query: 291 DAAQYIRFISNKNVFN 306
AQ + K + +
Sbjct: 345 RLAQKLIDQGAKRILD 360
>gi|108797657|ref|YP_637854.1| porphobilinogen deaminase [Mycobacterium sp. MCS]
gi|119866744|ref|YP_936696.1| porphobilinogen deaminase [Mycobacterium sp. KMS]
gi|108768076|gb|ABG06798.1| hydroxymethylbilane synthase [Mycobacterium sp. MCS]
gi|119692833|gb|ABL89906.1| hydroxymethylbilane synthase [Mycobacterium sp. KMS]
Length = 314
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 144/316 (45%), Gaps = 17/316 (5%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M P RIGTR S LA A R +L+ H ++ +ST+GDR + +I
Sbjct: 1 MSNADTPIRIGTRASLLATTQAGTIRDALIAR----GHAAELVLISTEGDRNQG-PIADI 55
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G+FT + + + G +D AVHS KD+PT + I A RED RD ++ L
Sbjct: 56 G-VGVFTAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVL 114
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R
Sbjct: 115 GELPAGSTVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLAR 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + E L P+P QGA+ +E + L+ ++ DT +V ER LA
Sbjct: 175 IGRLGDVTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLA 234
Query: 239 ELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
EL+ C + + A + G V A DG S G A ++G
Sbjct: 235 ELEAGCSAPVGAIAEVVESIDEDGRVFEEVSLRGCVAALDGSDVIRASGIGTPGRAADLG 294
Query: 290 RDAAQYIRFISNKNVF 305
A + + + +
Sbjct: 295 VSVAAELFELGARELI 310
>gi|118619687|ref|YP_908019.1| porphobilinogen deaminase [Mycobacterium ulcerans Agy99]
gi|158512390|sp|A0PW29|HEM3_MYCUA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118571797|gb|ABL06548.1| porphobilinogen deaminase HemC [Mycobacterium ulcerans Agy99]
Length = 314
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 146/308 (47%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAAIVRDALIAN----GHAAELVTISTLGDR-SSAPIETLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A + + RG ++TRLN+++N AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQFRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGIGTSGRARELGLAVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|72004296|ref|XP_781025.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115932051|ref|XP_001188143.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 324
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 143/318 (44%), Gaps = 17/318 (5%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M K R+G+R S LA+ L VH P I+ + T GD I ++ L I
Sbjct: 1 MADKMEIVRVGSRKSELAMIQTNHVVEMLQKVH--PETEFKIVTMETIGDHIQDKPLASI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--- 115
G LFT+E+EK L E+D VHS KDMP++L + I A RED D + H
Sbjct: 59 GESNLFTKELEKALALDEVDMLVHSLKDMPSRLPSNMAIGAICEREDPHDALVLHKKLTG 118
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYA 174
S++ + SV+GTSS+RR A L R + D RG + TRL KL+ + ++LA A
Sbjct: 119 ISIETMKEGSVLGTSSVRRVAQLKRKFPHLVFKDVRGNLNTRLRKLDEGQVYDGLVLAVA 178
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R+ E I +IL + S QGA+ IE N + EL++ +NH T ER
Sbjct: 179 GMMRMGWEHRISQILKPDICKYSVSQGALGIEIKTKNRRMHELLRQLNHVPTLIRCIAER 238
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGI------VLASDGKIFHEVSRNGNRCDAINI 288
L L+G C + +A + + + + + + +A +
Sbjct: 239 GLLKTLEGGCSAPVAVHSELEENRHSLDAETNEEMKLFS---SVIAPWVSQHAMQEAEAL 295
Query: 289 GRDAAQYIRFISNKNVFN 306
G A+ + +
Sbjct: 296 GVSVAKGLFDKGAGPILE 313
>gi|237751827|ref|ZP_04582307.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879]
gi|229373193|gb|EEO23584.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879]
Length = 328
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 153/315 (48%), Gaps = 14/315 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++KP +GTR S LAL A + L + +V+ + TKGD+I + L +IGGK
Sbjct: 11 QEKPLVLGTRGSLLALWQANHIKEKLESL----GFQVVLKTIKTKGDKILDAPLAKIGGK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT+E+E +L+SG ID AVHS KD+P + L + + RED RD F+S + L
Sbjct: 67 GLFTKELENELLSGGIDFAVHSLKDVPIAIPPELMLVSITQREDARDCFVSEKYADIASL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR--L 179
+ +GT+SLRR L R R D+ RG ++TRL KL + AI+LA AG+ R L
Sbjct: 127 PQGAKVGTTSLRRSMQLKRIRQDLDTQSLRGNVQTRLEKLRKGEFDAIILASAGLNRLDL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETH-------VNNPKAQELVKVINHEDTWDSVNC 232
K + L I F P+ GQG++ IE + ++++ ++ + N
Sbjct: 187 KDDIGFISHLQINQFIPAMGQGSLGIECRDPKYSPDFRDQAIMKVLESLHDSKSALCCNI 246
Query: 233 ERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
ERAF+ L G C+S I A + +V D +R N+ + +D
Sbjct: 247 ERAFIQLLGGGCQSPIGIHAQILDSKEIEIQCVVGNLDASKVLTETRVCNKGEVEYALQD 306
Query: 292 AAQYIRFISNKNVFN 306
++ +
Sbjct: 307 MINTLKKNGVMEILE 321
>gi|167038985|ref|YP_001661970.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514]
gi|300913424|ref|ZP_07130741.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561]
gi|307723560|ref|YP_003903311.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513]
gi|166853225|gb|ABY91634.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514]
gi|300890109|gb|EFK85254.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561]
gi|307580621|gb|ADN54020.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513]
Length = 299
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 9/300 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGK
Sbjct: 1 MKKVIKVGTRSSELALKQTAMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSGDGTQFMDL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL
Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + + T+ + ER L
Sbjct: 179 ENIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAF 238
Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+C+ +A + + + G + + +
Sbjct: 239 GVNCRQPFGAYAQYRKEEDEEKINIKVAYQKEN--KLLKSEVTGLIEETDKMIEKLIEEF 296
>gi|289577611|ref|YP_003476238.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9]
gi|289527324|gb|ADD01676.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9]
Length = 299
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 93/300 (31%), Positives = 141/300 (47%), Gaps = 9/300 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK ++G+R S LAL + + + I+ ++T+GD + ++ ++EIGGK
Sbjct: 1 MKKVIKVGSRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPISEIGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F +EIE L+ GEID AVHS KDMP + +GL++ L RED RDVFIS +L
Sbjct: 59 GVFVKEIESALLKGEIDMAVHSLKDMPYETPEGLKLIPVLKREDPRDVFISKDGTQFMNL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ IGTSSLRR+ L RSD+ I RG I+TRL K+ I+L+ AG+ RL
Sbjct: 119 KEGAKIGTSSLRRQVQLKDLRSDMQTIPIRGNIKTRLRKIEELNLDGIVLSAAGLHRLGL 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAEL 240
E +I E + P+P QG + +E + QE I T+ + ER L
Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASIERELLKVF 238
Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+C+ +A + + D + G + + +
Sbjct: 239 GVNCRQPFGAYAQYRKERDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEEF 296
>gi|328786215|ref|XP_624261.3| PREDICTED: porphobilinogen deaminase-like [Apis mellifera]
Length = 357
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 166/342 (48%), Gaps = 41/342 (11%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+G+R S LAL L + H P II +STKGD+I +++L +IG K
Sbjct: 6 TRDVIRVGSRKSELALKQTKYVIECLKEYH--PTKEFQIITMSTKGDKILDKSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118
LFTEE+E L SG +D VHS KD+PT L +G+ + A L RED RD + + ++L
Sbjct: 64 SLFTEELELALESGRVDFVVHSLKDLPTSLPEGMALGAILKREDPRDAVVMSKKYKNKTL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
L SVIGTSSLRR A L R + V + RG + TRL KL+ N AI+LA AG+
Sbjct: 124 STLPEGSVIGTSSLRRSAQLARNMPHLKVENIRGNLNTRLRKLDDENGPFAAIILAAAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KR+ E I ++L E+ + GQGA+ +E + K L++ + +T CER+F
Sbjct: 184 KRMNWENRISQLLEPEEALYAVGQGALGVECRETDWKILSLLEPLYDVETTLRCVCERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----------------- 279
L L G C + +A + K L G V + DG+ F + +
Sbjct: 244 LKTLGGGCSAPVAVSSTLKNKILTVTGAVWSLDGQKFIKDTSKSKLYIPDDDGEPPKKCP 303
Query: 280 ------------GNRCD-----AINIGRDAAQYIRFISNKNV 304
G + A +G+D + + + +V
Sbjct: 304 YREPQLYCSVAPGKVSNISLLGAEQLGKDLGKNLIEKNALDV 345
>gi|288932129|ref|YP_003436189.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642]
gi|288894377|gb|ADC65914.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642]
Length = 292
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 10/299 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ IG+R S LALA A + + L + + + + T GD + ++ L E G
Sbjct: 1 MSER-VVIGSRGSKLALAQAEKVKKLLEER----DFEVEVKVIKTHGDIMKDKPLHEFKG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F I++ L GEID AVHS KD+P++ ++G I+A L RE D FIS ++
Sbjct: 56 MGAFVRAIDEALKRGEIDLAVHSYKDVPSQRVEGTVIAAVLERESACDAFISREGLKFEE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ + S IGTSSLRR+A + + R D+ V + RG ++TRL KL I++A AG+ RL
Sbjct: 116 MPVASKIGTSSLRRRAFVKKLRKDLEVENLRGNLDTRLRKLREGFYDGIIVAEAGLIRLG 175
Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+K E LN E F PS QG I + + N + +NHE T + ERA L E
Sbjct: 176 LDKEIEYERLNPEVFVPSANQGVIAVASRENEAEL---FSFLNHEKTRLETDVERAVLRE 232
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L C +A +G + +L+ +G+ V ++ +A+ + A+ ++
Sbjct: 233 LGIGCAIPAGIYAKAEG-KVRLIVEILSEEGEKSVRVDEKLSKENAVEEAVEIAKNLKS 290
>gi|116199079|ref|XP_001225351.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51]
gi|88178974|gb|EAQ86442.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51]
Length = 343
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 152/324 (46%), Gaps = 25/324 (7%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++GTR S LAL ++L H P + ++T GDR + L E+G KGL+
Sbjct: 7 TIKMGTRRSALALRQTELVIAALQSAH--PHVTFEVHAMATAGDRDKSTPLPEMG-KGLW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-------TAQS 117
T E+E KL++ ++D VHS KDMPT L +G + RED RDV I +
Sbjct: 64 TSELEAKLVARDVDVIVHSLKDMPTTLPEGCVLRCVPAREDPRDVVIFSKAREEAGRYKK 123
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
LKDL +V+GTSS+RR A L R + D RG IETRL K + AI+LA AG+
Sbjct: 124 LKDLPEGAVVGTSSVRRAAQLKRRYPGLVFRDVRGNIETRLRKCDEEGFDAIILAAAGLL 183
Query: 178 RLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
RL I + L+ + GQG + +E ++ + +EL+K I T + E
Sbjct: 184 RLDLGARIAQYLDSNTEGGGLLHAVGQGGLGLEVREDDEQMKELLKAIEDTPTMTACFAE 243
Query: 234 RAFLAELDGSCKSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRN---GNR 282
R+ + L+G C I K L +V++ DG E + +
Sbjct: 244 RSVMRTLEGGCSVPIGVETAWVEEEEAGEKKKKLQLRAVVVSLDGSQAVEGEKTQEVTSL 303
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
A +G++ AQ + + + +
Sbjct: 304 EQAEAMGKELAQELAGRGAQQILD 327
>gi|225677334|ref|ZP_03788309.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590620|gb|EEH11872.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 292
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 110/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 3 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L +
Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSGGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 121 IIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++ SC
Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIRVKSERSFMKTVNASCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + L+ ++ D K + R DA +G DA ++
Sbjct: 238 TPLAALAEYVSENMLHLRCMLA--DEKNIYFTERTSFIEDAEKMGMDAGLELKSK 290
>gi|329936060|ref|ZP_08285860.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045]
gi|329304538|gb|EGG48416.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045]
Length = 323
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 21/321 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + ++ +V P + ++ ++T GD L +IGG
Sbjct: 1 MTEQALRLGTRRSKLAMAQSGQVADAVGEVTGRP---VELVEITTYGDTSR-EHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ GE+D AVHS KD+PT + L ++A RED RDV I+ + D
Sbjct: 57 TGVFVAALREALLRGEVDLAVHSLKDLPTTQPEELTLAAVPLREDPRDVLIARDGLAFAD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GT S RR A L + D + RG I+TR+ + + A++LA AG+
Sbjct: 117 LPEGARVGTGSPRRMAQLNAYARDHGTRIETVPIRGNIDTRIGYVRKGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIET----HVNNPKAQELVKVINHEDTWDSVNC 232
R+ + + + L+++ P+PGQGA+ +E + + + ++ T +V
Sbjct: 177 NRIGRTSEVTDFLSVDTVLPAPGQGALAVECRTAGNPADAALAAALAQLDDPFTRAAVTA 236
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----C 283
ERA LA L+ C + + A + G+V +DG ++S G
Sbjct: 237 ERALLAALEAGCSAPVGALADLLNDGQIDKEMRLRGVVGTTDGSTLVQLSTTGPVPETHD 296
Query: 284 DAINIGRDAAQYIRFISNKNV 304
A+ +GR+ A + +
Sbjct: 297 QAMALGRELAAEMLAKGAAGL 317
>gi|99034622|ref|ZP_01314577.1| hypothetical protein Wendoof_01000608 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 302
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 13 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L +
Sbjct: 71 KEIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 131 TIATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 187
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 188 TEVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 247
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + L+ ++ + GK + R DA +G DA ++
Sbjct: 248 TPLAALAEYVSENMLHLRCMLAS--GKNIYFTERTSFIEDAEKMGMDAGLELKSK 300
>gi|296118431|ref|ZP_06837010.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM
20306]
gi|295968572|gb|EFG81818.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM
20306]
Length = 300
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 8/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +IGTR S LA A R + D + ++T GD + IG
Sbjct: 1 MSELK-KIGTRGSKLATTQAGHVRDWITDN----GTPSELHIVTTAGDVNM-APVERIG- 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT + + L E D AVHS KD+PT + + RED R+ I+ +L D
Sbjct: 54 VGVFTHALREALHEQECDIAVHSFKDLPTAPDERFHLI-VPKREDNREALIARDGLTLDD 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+ RR + L R D+ + RG IETR++ + N + A++LAYAG+ R
Sbjct: 113 LPEGAKVGTSAPRRISQLKAMRPDLDIRPLRGNIETRMSYVTNGELDAVMLAYAGLVRAG 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
++ + + P+P QGA+ +E + + + V I ERA L L
Sbjct: 173 YADRATQVFSPDVLMPAPAQGALAVEVNAQDAELVNAVNAIADAKAGLQAAGERAILRRL 232
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ C + +A + + + +G V DG S G ++ +G A+ +
Sbjct: 233 EAGCTAPVAATSVIEDDLITVHGGVFQLDGSRQAVASETGPLENSYELGIKVAEALIEQG 292
Query: 301 NKNVFN 306
+
Sbjct: 293 AFEIIE 298
>gi|238508247|ref|XP_002385322.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus
NRRL3357]
gi|220688841|gb|EED45193.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus
NRRL3357]
Length = 333
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 153/314 (48%), Gaps = 15/314 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R SL P + I L T GD+ + L G K L+
Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDSLQK--TAPNRSYEIETLHTLGDKDKSTALYNFGAKSLW 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL+ L
Sbjct: 69 TSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSLQTL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179
+V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG++R+
Sbjct: 129 PEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGLERI 188
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + + +D + GQGA+ +ET + QEL+ + E + + ERA L
Sbjct: 189 GLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAERALL 248
Query: 238 AELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRD 291
L+G C I + L IV++ DG + + + +A G++
Sbjct: 249 RTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDGTQSVQDTIDATVRTKDEATVFGKE 308
Query: 292 AAQYIRFISNKNVF 305
A + +
Sbjct: 309 LATRLVTAGADAIL 322
>gi|209886240|ref|YP_002290097.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5]
gi|209874436|gb|ACI94232.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5]
Length = 338
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 20/322 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S +ALA E L P ++ I+ T GD+ L ++GGK
Sbjct: 10 TDKAMRIGTRKSVMALAQTSEIARQLTAA--DPALDVEIVKFETTGDQDQTGKLLDLGGK 67
Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G F +I + G ++ A+HS KDMP + GL I A L R+ D + +L
Sbjct: 68 GGAFVAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGATLTRDPPTDALVVRHGVTLA 127
Query: 120 DLAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN----------- 164
DL IGT+++RR A + R + +I FRG +TR+ KL+N
Sbjct: 128 DLRRTGGKGFKIGTNAVRRAAYVRRLFPECEIIHFRGAADTRIRKLDNGEKQRLPEGGEV 187
Query: 165 -KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A A+++A AG++R+ I + ++ P+ GQG + +E ++ + I+
Sbjct: 188 GPADALVMAQAGLERVGCADRIAHCFSPDEILPAVGQGIVAVECAASDWCTLARLAQIDD 247
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ ER L L+G C S IAG+A +G + VL F EV+R G
Sbjct: 248 PVSRCCAAAEREVLWVLNGHCNSPIAGYAIVEGDDVLLKAAVLDEANDHFIEVTRRGPAS 307
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
+GR A + +V
Sbjct: 308 RPRELGRAVAFELLAKGAADVI 329
>gi|182437949|ref|YP_001825668.1| porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778585|ref|ZP_08237850.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1]
gi|178466465|dbj|BAG20985.1| putative porphobilinogen deaminase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326658918|gb|EGE43764.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1]
Length = 328
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + ++ +V + ++ ++T GD L +IGG G+F
Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEAVREVT---GRAVELVEITTYGDTSR-EHLAQIGGTGVF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GE+D AVHS KD+PT L ++A RED RD I+ + L
Sbjct: 70 VAALREALVRGEVDFAVHSLKDLPTFQPDDLVLAAVPQREDPRDALIARDGLTFGQLPEG 129
Query: 125 SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +GT S RR A L + + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 130 ARVGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRLG 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA L
Sbjct: 190 RSGEVTEFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRAAVTAERALLAAL 249
Query: 241 DGSCKSAIAGFAY--CKG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291
+ C + + A G + L G+V +DG ++S G DA IGR+
Sbjct: 250 EAGCSAPVGALADLLVDGQVVNELRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAAIGRE 309
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 310 LAAEMLAKGAAGL 322
>gi|240171918|ref|ZP_04750577.1| porphobilinogen deaminase [Mycobacterium kansasii ATCC 12478]
Length = 317
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAATVRDALIAN----GHPAELVTISTAGDR-SSAPIETLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR D RD ++ L +L S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAEDPRFTIAAIPPRNDPRDAVVARDGLVLGELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAADHRLAAVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGVGTSGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|150016167|ref|YP_001308421.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052]
gi|254800241|sp|A6LSY5|HEM3_CLOB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|149902632|gb|ABR33465.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052]
Length = 291
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 6/296 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
I TR S LA SL D + + + T+GDR + +L +IGGKG
Sbjct: 1 MNKLTIATRKSKLAQTQTEIIMKSLKDKFN---IDSEKMLIVTEGDRKLDVSLAKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF ++IE L+ D AVHS KD+P +L +I+A REDIRDV IS K+L
Sbjct: 58 LFVKDIEIALLEKRADGAVHSMKDVPYELSHEFEIAAITEREDIRDVLISKDNIPFKELR 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++IGTSS+RR L R+D+ ++ RG ++TRL K+ I+LA AG+KRL +E
Sbjct: 118 KGAIIGTSSIRRACQLKLMRNDLDIVPIRGNVQTRLEKMKEQNLDGIILASAGLKRLNEE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I E + + F P+ QGA+ IE + + + + + +V ER+F+ L+G
Sbjct: 178 DIITEYFDPKVFIPAVAQGALGIECLKTSSAK-KYFEKMEDSNAKLTVEAERSFMRMLNG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C S I ++ +G+ LY GI G + G++ D I +GR A I
Sbjct: 237 DCHSLIGAYSEIQGNDLYMIGIY--DIGGRIVKKDILGDKNDHIELGRKLANKILE 290
>gi|239942156|ref|ZP_04694093.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 15998]
gi|239988619|ref|ZP_04709283.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 11379]
gi|291445603|ref|ZP_06584993.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998]
gi|291348550|gb|EFE75454.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998]
Length = 328
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + ++ +V + ++ ++T GD L +IGG G+F
Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEAVREVT---GRAVELVEITTYGDTSR-EHLAQIGGTGVF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L GE+D AVHS KD+PT L ++A RED RD ++ + + L
Sbjct: 70 VAALREALARGEVDFAVHSLKDLPTSQPDELVLAAVPQREDPRDALVARDGLTFEQLPDG 129
Query: 125 SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR A L + + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 130 ARIGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRLG 189
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + + L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA L
Sbjct: 190 RTGEVTDFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRVAVTAERALLAAL 249
Query: 241 DGSCKSAIAGFAY--CKG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291
+ C + + A G + L G+V ++DG ++S G DA +GR+
Sbjct: 250 EAGCSAPVGALADVLVDGHVVNELRLRGVVGSTDGSSLVQLSTTGPVPTSHDDAAALGRE 309
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 310 LASEMLAKGAAGL 322
>gi|296809948|ref|XP_002845312.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
gi|238842700|gb|EEQ32362.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
Length = 330
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 149/319 (46%), Gaps = 17/319 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R++L+ + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRNALVA--RWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPETCTLSAIIKREDPRDALVVKKGQPNMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SVIGTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVIGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ + + GQGA+ +E + + E+++ I + T + ER
Sbjct: 183 RTGHGYRISQYLDSKNGQMLHAVGQGALGVEIRAGDARMIEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNR---CDAIN 287
L L+G C + + T L IV + DGK E ++G+ A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVQDTDGKEMLRLRCIVTSIDGKEAVETEKDGDVQTPEQAEA 302
Query: 288 IGRDAAQYIRFISNKNVFN 306
G+ A + +
Sbjct: 303 FGKAVADEMVGKGAGKILE 321
>gi|6319996|ref|NP_010076.1| Hem3p [Saccharomyces cerevisiae S288c]
gi|122846|sp|P28789|HEM3_YEAST RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3771|emb|CAA77804.1| porphobilinogen deaminase [Saccharomyces cerevisiae]
gi|1429351|emb|CAA67486.1| hydroxymethylbilane synthase [Saccharomyces cerevisiae]
gi|1431340|emb|CAA98783.1| HEM3 [Saccharomyces cerevisiae]
gi|190405197|gb|EDV08464.1| phorphobilinogen deaminase [Saccharomyces cerevisiae RM11-1a]
gi|256270069|gb|EEU05314.1| Hem3p [Saccharomyces cerevisiae JAY291]
gi|259145042|emb|CAY78306.1| Hem3p [Saccharomyces cerevisiae EC1118]
gi|285810835|tpg|DAA11659.1| TPA: Hem3p [Saccharomyces cerevisiae S288c]
gi|323309897|gb|EGA63098.1| Hem3p [Saccharomyces cerevisiae FostersO]
gi|323349387|gb|EGA83611.1| Hem3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 327
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + + P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEEKY--PDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115
K L+T+E+E L ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ + I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR----CDA 285
ERA + L+G C I + T L IV+ +G E D+
Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
+ G+ A+ + K + +
Sbjct: 299 MACGKILAERMIADGAKKILD 319
>gi|169784578|ref|XP_001826750.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83775497|dbj|BAE65617.1| unnamed protein product [Aspergillus oryzae]
Length = 333
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 153/314 (48%), Gaps = 15/314 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R SL P + I L T GD+ + L G K L+
Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDSLQK--TAPNRSYEIETLHTLGDKDKSTALYNFGAKSLW 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL+ L
Sbjct: 69 TSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSLQTL 128
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179
+V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG++R+
Sbjct: 129 PEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGLERI 188
Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
+ I + + +D + GQGA+ +ET + QEL+ + E + + ERA L
Sbjct: 189 GLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAERALL 248
Query: 238 AELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRD 291
L+G C I + L IV++ DG + + + +A G++
Sbjct: 249 RTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDGTQSVQDTIDATVRTKDEATVFGKE 308
Query: 292 AAQYIRFISNKNVF 305
A + +
Sbjct: 309 LATRLVTAGADAIL 322
>gi|256845448|ref|ZP_05550906.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2]
gi|256719007|gb|EEU32562.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2]
Length = 302
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P I + T GD+ ++I
Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDIS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F + L GK + + I AA+ I+
Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAHMAAEEIKNK 295
Query: 300 SNKN 303
NK
Sbjct: 296 INKG 299
>gi|167618302|ref|ZP_02386933.1| porphobilinogen deaminase [Burkholderia thailandensis Bt4]
Length = 278
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 103/268 (38%), Positives = 153/268 (57%), Gaps = 2/268 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPTGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC
Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+ +A A +G L+ G V +DG
Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGAR 278
>gi|146419731|ref|XP_001485826.1| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC
6260]
Length = 371
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 153/319 (47%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K +IG R LA+A + + L+ K P I+ LST GD+I ++ L GGK
Sbjct: 8 TTKHIQIGGRKLTLAVAQSNIVKKHLVA--KFPQLKCSILALSTLGDQIQSQPLYLFGGK 65
Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
L+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV +
Sbjct: 66 ALWTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRLDPRDVLVMRKGS 125
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILL 171
+SL +L +++GTSS+RR + L++ + RG I TR+ KL+ +LL
Sbjct: 126 KYKSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLL 185
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++R+ + I L+ D + GQGA+ +E + + ++L++ I T +
Sbjct: 186 AAAGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAIEDVPTSLCCH 245
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
ER+ + L+G C I +T L F IV++ DG F E + +A
Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVEDKIEMKVTTKSEAD 305
Query: 287 NIGRDAAQYIRFISNKNVF 305
+G+ + K +
Sbjct: 306 ALGQQLGDKLIAKGAKEIL 324
>gi|254821058|ref|ZP_05226059.1| porphobilinogen deaminase [Mycobacterium intracellulare ATCC 13950]
Length = 315
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ + H ++ ++T GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGVVRDALIAL----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAMEEGRVDAAVHSHKDLPTADDPRFAVAAIPVRNDPRDAVVARDGLVLGELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ER LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDTRLAAVLAELDDADTRASVTAERTLLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEEGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|225706856|gb|ACO09274.1| Porphobilinogen deaminase [Osmerus mordax]
Length = 357
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 108/333 (32%), Positives = 155/333 (46%), Gaps = 33/333 (9%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K L
Sbjct: 17 RVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSL 74
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L
Sbjct: 75 FTKELENALERNEVDLVVHSLKDLPTTLPTGFTIGAVLQRENPHDAVVLHPKNAGLTLDA 134
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
L SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG+KR+
Sbjct: 135 LPSESVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKRM 194
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E + +IL +D + GQGA+ IE + E+V ++H +T ERAFL
Sbjct: 195 GWEGRVSQILGPDDCMYAVGQGALAIEVRARDRDILEMVSTLHHPETVLRCIAERAFLKH 254
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRN---------------- 279
L+G C +A K L G V + DG K + S +
Sbjct: 255 LEGGCSVPVAVHTELKDLMLSMTGAVFSLDGADSLKEVMQTSVDTGNQVEEPADTQHVGV 314
Query: 280 -------GNRCDAINIGRDAAQYIRFISNKNVF 305
++ A +G D A + ++
Sbjct: 315 TARNMPQSSQDAAEKLGVDLATLLLSKGAMDIL 347
>gi|50424323|ref|XP_460748.1| DEHA2F08888p [Debaryomyces hansenii CBS767]
gi|55976377|sp|Q6BM23|HEM3_DEBHA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49656417|emb|CAG89089.1| DEHA2F08888p [Debaryomyces hansenii]
Length = 361
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 156/320 (48%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IG R S LA+ + + +++ K P + ++ LST GD++ ++ L GGK
Sbjct: 15 KDNHVQIGGRKSKLAVVQSEIVKECIVE--KFPELSCSVLALSTLGDKVQSKPLYSFGGK 72
Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
L+T+E+E L+ +D VHS KD+PT L + ++ L RED RD + +
Sbjct: 73 ALWTKELEILLLEQVEEYPRLDLIVHSLKDIPTNLPEEFELGCILNREDARDALVMKSGS 132
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILL 171
+SL DL S++GTSS+RR + LL+ + RG ++TRLNKL++ +LL
Sbjct: 133 SYKSLADLPDGSLVGTSSVRRSSQLLKNHPKLRFDSVRGNLQTRLNKLDDENSPFECLLL 192
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ I L+ + + GQGA+ IE + K +L+K I T
Sbjct: 193 ASAGLIRIGLGDRITAHLDAPEMYYAVGQGALGIEIRKGDEKMLQLLKTIEDLPTTYCCL 252
Query: 232 CERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
ER+ + L+G C I ++ + L I+++ DG F E G N+ DA
Sbjct: 253 AERSLMRHLEGGCSVPIGVQSHYNESTNELSLKAIIVSPDGIHFVEDEYKGVVNNKDDAD 312
Query: 287 NIGRDAAQYIRFISNKNVFN 306
IG + + + N
Sbjct: 313 AIGIKVGDLLSAKGGREILN 332
>gi|169779115|ref|XP_001824022.1| porphobilinogen deaminase [Aspergillus oryzae RIB40]
gi|83772761|dbj|BAE62889.1| unnamed protein product [Aspergillus oryzae]
Length = 342
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 151/320 (47%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F +GTR S LAL+ S+L V+ P + I T GD T E K
Sbjct: 16 SRKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTK 73
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV +
Sbjct: 74 NLWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSL 133
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
DL SV+GTSS+RR A L + VID RG I TRL KL+ I+LA AG+
Sbjct: 134 SDLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGL 193
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER
Sbjct: 194 LRLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAER 253
Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AI 286
+ L L+G C + + L IV++ DGK EV +G+ A
Sbjct: 254 SLLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGSVDSVQAAE 313
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+ G A+ + + +
Sbjct: 314 DFGVTVAKELVTKGAEKILE 333
>gi|296168169|ref|ZP_06850190.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896847|gb|EFG76476.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 317
Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 143/310 (46%), Gaps = 16/310 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G
Sbjct: 3 NVIRIGTRGSLLATTQAGVVRDALIAN----GHPAELVIITTAGDR-SSAPIETLG-VGA 56
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT + + + G +D AVHS KD+PT I+A PR D RDV ++ L +L
Sbjct: 57 FTTALREAINDGRVDAAVHSHKDLPTADDPRFTIAAIPPRNDPRDVVVARDGLVLGELPP 116
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL +
Sbjct: 117 GSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLD 176
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E L P+P QGA+ +E ++ ++ DT SV ERA LAEL+
Sbjct: 177 DVTETLEPVQMLPAPAQGALAVECR-AGDGLAAVLAELDDADTRASVTAERALLAELEAG 235
Query: 244 CKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
C + + A L G V A DG S G A +G A
Sbjct: 236 CSAPVGAIAEVVESLDEEGRVFEELSLRGCVAALDGSDVIRASGIGTADRARELGVSVAA 295
Query: 295 YIRFISNKNV 304
+ + + +
Sbjct: 296 ELFELGAREL 305
>gi|307331356|ref|ZP_07610476.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
gi|306882979|gb|EFN14045.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113]
Length = 329
Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 154/313 (49%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + +V P + ++ ++T GD L +IGG G+F
Sbjct: 15 PLRLGTRRSALAMAQSGLVADLVREVTGRP---VELVEITTYGDTSR-EHLAQIGGTGVF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+SGEID AVHS KD+PT GL+++A RED RD I+ + L
Sbjct: 71 VSALREALLSGEIDLAVHSLKDLPTAEPDGLRLAAIPRREDPRDALIARDGLTFAQLPPG 130
Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
S IGT S RR A L W DI + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 131 SRIGTGSPRRAAQLNAWARAFGLDIETVPIRGNVDTRIGYVRSGRLDAVVLAAAGLIRLG 190
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+L++ P+PGQGA+ +E ++ + I+ T +V ER+ LA L
Sbjct: 191 RIGEATELLDVGHVLPAPGQGALAVECAASSVALTARLAEIDDPYTRVAVTAERSLLAAL 250
Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291
+ C + + A + G+V +DG ++S G +A ++GR+
Sbjct: 251 EAGCSAPVGALADLLADGQAVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPSEAGDLGRE 310
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 311 LAAEMLAKGAAGL 323
>gi|182416929|ref|ZP_02948313.1| porphobilinogen deaminase [Clostridium butyricum 5521]
gi|237667199|ref|ZP_04527183.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379227|gb|EDT76728.1| porphobilinogen deaminase [Clostridium butyricum 5521]
gi|237655547|gb|EEP53103.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 292
Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 106/295 (35%), Positives = 156/295 (52%), Gaps = 6/295 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ TR S LA SL + + + T+GDR + +L +IGGKGLF
Sbjct: 3 KLILATRKSRLAQVQTEIVMDSLKNKINK---ESEKLLIVTEGDRKLDVSLNKIGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++IE L+ G D AVHS KD+P +L +I+A + REDIRDV IS S L
Sbjct: 60 VKDIECALLEGSADAAVHSMKDVPYELSNEFEITAIIEREDIRDVLISKDGISFSKLRYG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS+RR A L RSDI V+ RG ++TRL K+ + I+LA AGI RLK + +
Sbjct: 120 AKIGTSSIRRAAQLKLLRSDIEVVPIRGNVQTRLAKMESENLDGIILAAAGIHRLKLDSI 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E + ++F P+ QGAI IE N + + K++++ + +V ER+F+ EL G C
Sbjct: 180 ITEYFDPKEFIPAVSQGAIGIECV-KNSENSKYFKMLDNSEARITVEAERSFMRELKGDC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I ++ G LY G + +G + G + + + +GR A+ I
Sbjct: 239 HSLIGAYSEVTGDELYMIG-IYDLNG-VIVRKDIKGKKSNHLEVGRKLAEKILNE 291
>gi|167044207|gb|ABZ08888.1| putative Porphobilinogen deaminase, dipyromethane cofactor binding
domain protein [uncultured marine microorganism
HF4000_APKG5H11]
Length = 322
Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 148/299 (49%), Gaps = 3/299 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LAL + L P + + T+GD L +G G+F
Sbjct: 18 IKVGSRGSTLALIQDHVVINRLKA--NSPALEFEVDTVRTRGDVDQTSRLAGMG-LGIFV 74
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E++L+ G++D AVHS KDMPT+L GL + A L RED RDV ++ L L +
Sbjct: 75 KELEQELLDGKLDIAVHSLKDMPTQLADGLVLGAVLSREDPRDVLVNRYGCPLDGLPKGA 134
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L ++ + V+ RG +ETRL K +A +LA AG+ RL + I
Sbjct: 135 KIGTSSPRRAAQLKQYAPQVEVVSIRGNVETRLRKAQGEEADGAILAAAGMIRLGLQDQI 194
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ F P PGQG + +E ++ + EL+ I+ DT ER FLA L G C
Sbjct: 195 AEYLSATQFVPPPGQGILAVEARADDFRMLELLSAIDDADTRYEATAERGFLARLGGGCS 254
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A C G + + +DG+ G + D + + DA + ++
Sbjct: 255 IPVGAYARCNGDNIVMTIYMSTADGEKKFSAKIQGLKRDPLQLANDAYLALVERGGADL 313
>gi|254566627|ref|XP_002490424.1| Phorphobilinogen deaminase [Pichia pastoris GS115]
gi|238030220|emb|CAY68143.1| Phorphobilinogen deaminase [Pichia pastoris GS115]
Length = 344
Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 17/316 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G+R S LA+ A R ++ + P ++ +ST GD++ N+ L GGK L+T
Sbjct: 15 LKLGSRKSALAIIQAEIVRQLILKEY--PELETKLVSVSTLGDQVQNKALFTFGGKSLWT 72
Query: 66 EEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
+E+E L+ +ID VHS KDMPT L ++ + RED RD + +S
Sbjct: 73 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 132
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAG 175
L DL +V+GTSS+RR A LL+ + RG ++TRL KL++ + +LLA AG
Sbjct: 133 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 192
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ R + I LN + S GQGA+ +E + + + + I H T ERA
Sbjct: 193 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 252
Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290
L L+G C I T L +V++ +G+ S A + G
Sbjct: 253 LLRYLEGGCSVPIGVSTIYSEDTKELTMNSLVVSCNGRDSVTESMTEVVTTEEQAEDFGE 312
Query: 291 DAAQYIRFISNKNVFN 306
AQ + K + +
Sbjct: 313 RLAQKLIDQGAKRILD 328
>gi|183980868|ref|YP_001849159.1| porphobilinogen deaminase HemC [Mycobacterium marinum M]
gi|238054421|sp|B2HRJ2|HEM3_MYCMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|183174194|gb|ACC39304.1| porphobilinogen deaminase HemC [Mycobacterium marinum M]
Length = 314
Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ +ST GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAATVRDALIAN----GHAAELVTISTLGDR-SSAPIETLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S
Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN+++N AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGIGTSGRARELGLAVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|331230279|ref|XP_003327804.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309306794|gb|EFP83385.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 461
Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 97/336 (28%), Positives = 144/336 (42%), Gaps = 35/336 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LAL A + I +ST GD + L +GGK ++T
Sbjct: 67 LIIGTRNSKLALVQAESVEREINKRFSSDQIKTEIKSMSTSGDENLLKPLYLLGGKSVWT 126
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL-- 123
+E+E L++G ID VHS KD+PT L G ++++ + RED RD I +L+
Sbjct: 127 KELEFNLLNGSIDLIVHSLKDVPTSLPAGCELASVMLREDPRDALIIRNGLPFTNLSQLP 186
Query: 124 -HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180
S+IGTSS+RR A L R +++ D RG ++TR KL+ ++ I+LA AG+KR+
Sbjct: 187 AGSIIGTSSVRRVAQLRRRFPNLAFQDIRGNLQTRFKKLDASDSPYTGIILAVAGLKRIG 246
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA-----------------QELVKVINH 223
+ I L D + GQGAI IE + LVK +
Sbjct: 247 LAERITSYLEPPDLYHAVGQGAIGIEIRTPPEIKLNETVEETILRERATTVRRLVKSLED 306
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIF 273
T S ERA L L+G C + + + L G+V + DG
Sbjct: 307 WRTALSCEAERALLRRLEGGCSVPVGVTSSLVDLPMPCPWAPKARLTLTGVVTSVDGLEE 366
Query: 274 HEVSRNGNR---CDAINIGRDAAQYIRFISNKNVFN 306
+ DA ++G A + + +
Sbjct: 367 VRKEAWLDVCGPKDAAHLGTALADELFRDGADKILD 402
>gi|319949783|ref|ZP_08023807.1| porphobilinogen deaminase [Dietzia cinnamea P4]
gi|319436542|gb|EFV91638.1| porphobilinogen deaminase [Dietzia cinnamea P4]
Length = 354
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 85/333 (25%), Positives = 144/333 (43%), Gaps = 35/333 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + ++GTR S LA A R +L+ + ++ + T+GD + + IG
Sbjct: 1 MSSRTLKVGTRGSTLATTQAGHVRDALIAA----GYPAELVIVRTRGDVVM-APVERIG- 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT E+ L G+ D AVHS KD+PT A PR D DV I+ +++
Sbjct: 55 VGVFTLELRAALERGDCDIAVHSYKDLPTARDDRFAPIAVPPRVDPSDVLIARDGLTMET 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+ RR++ L R D+ + RG I+TR+ + + A++LA AG+ R
Sbjct: 115 LPQGARVGTSAPRRRSQLAALRPDLDLHPLRGNIDTRMGYVTSGDLDAVVLAAAGLDRTG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ I++ P+P QGA+ +E ++ +A + V++H + + ER L +L
Sbjct: 175 AGERATHRFGIDEMLPAPAQGALAVEARADDTEAIAALAVVDHLPSRVRIAAERTLLRDL 234
Query: 241 DGSCKSAIAGFAYCKGST---------------------LYFYGIVLASDGKIFHEVSRN 279
+ C + + A G+ L + +V A DG S
Sbjct: 235 EAGCTAPVGARAELSGTDSARSDFAGTDPGADAPAADAVLTLHAVVAAHDGTTVLRTSGT 294
Query: 280 --------GNRCDAINIGRDAAQYIRFISNKNV 304
G A +GR A + ++
Sbjct: 295 TVPAEHPDGPVAAAEELGRRLAAELLDRGASDL 327
>gi|255715311|ref|XP_002553937.1| KLTH0E10604p [Lachancea thermotolerans]
gi|238935319|emb|CAR23500.1| KLTH0E10604p [Lachancea thermotolerans]
Length = 336
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 150/320 (46%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E + RIG R S LA+ + E + + + ++ + L T GD++ ++ L GGK
Sbjct: 10 EHQIVRIGGRKSKLAVIQSHEVKDLIER--EFSQYSCTVRALKTLGDQVQSKPLYSFGGK 67
Query: 62 GLFTEEIEKKLISG----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HT 114
++T+E+E L ID VHS KDMPT L G + A + R D D I
Sbjct: 68 AVWTKELEDLLYEKDKEKRIDLIVHSLKDMPTLLPDGFLVGAIIKRVDPTDCIIMAKESP 127
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLA 172
++L DL SV+GTSS+RR A L R + RG IETRL+KL++ I+LA
Sbjct: 128 YKTLDDLPDGSVVGTSSIRRSAQLKRKYPKLVFESVRGNIETRLSKLDDPITPFSCIVLA 187
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG+ R+K I + L+ + GQGA+ IE ++P +++ IN ++T
Sbjct: 188 TAGLLRVKLAHRITQRLDSSVMYHAVGQGALGIEIRSDDPWIAGILQKINDKETAICCFA 247
Query: 233 ERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRC----DAI 286
ER+ + L+G C I + L +V++ DG E DAI
Sbjct: 248 ERSLMRTLEGGCSVPIGVESNYDDTTKQLCLKAVVVSVDGTEAVEDEYTMTIEDMRQDAI 307
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G+ A + K++ +
Sbjct: 308 ICGQQLAHKMIKNGAKDILD 327
>gi|326930594|ref|XP_003211431.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog,
partial [Meleagris gallopavo]
Length = 1060
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 100/325 (30%), Positives = 145/325 (44%), Gaps = 35/325 (10%)
Query: 14 PLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73
LA L + + P I+ +ST GD+I + L++IG K LFT+E+E L
Sbjct: 728 QLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALE 785
Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---ALHSVIGTS 130
E+D VHS KD+PT L G I A RE+ D + H K L SVIGTS
Sbjct: 786 RNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTS 845
Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEIL 189
SLRR A L + + D RG + TRL KL+ AI+LA AG+KR+ E I ++L
Sbjct: 846 SLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLL 905
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ ED + GQGA+ +E + + +V V++ +T ERAF+ L+G C +A
Sbjct: 906 SPEDCLYAVGQGALAVEVRAKDQETLNMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVA 965
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR--------------------------- 282
K LY G V + DG + + +
Sbjct: 966 VNTMLKDGQLYLTGAVYSLDGSDSLKETMQASVNYPQRNEDGPNDDVQHVGITAKNVSGQ 1025
Query: 283 --CDAINIGRDAAQYIRFISNKNVF 305
A N+G + A + K++
Sbjct: 1026 AQEAAENLGIELASLLLSKGAKHIL 1050
>gi|226228000|ref|YP_002762106.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27]
gi|226091191|dbj|BAH39636.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27]
Length = 309
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 105/310 (33%), Positives = 156/310 (50%), Gaps = 10/310 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RIGTR S LAL A + + L ++ +T GDRI +R L+ IG
Sbjct: 1 MMTVPVRIGTRSSELALRQARQVAAQLDAR----GVPSELVEYTTLGDRILDRPLSAIGE 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT E+E L++G IDCAVHS KD+PT +G+ + A L RED RD +
Sbjct: 57 KGLFTAELEADLLAGRIDCAVHSLKDLPTADPQGIIVVALLEREDPRDALVVRAGVDAHS 116
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L + +GTSSLRR+A L RSD+ V + RG + TRL KL+ + A LLA AG+
Sbjct: 117 LDTLPEGARVGTSSLRRRAQLQALRSDLEVCELRGNVGTRLRKLDEGQVDAALLAAAGLH 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL I L+ ++ +PGQGAI ++ ++ + ++H T +V ERA L
Sbjct: 177 RLGLADRIVAYLDAPEWLSAPGQGAIAVQGRADDEALLSTLSSLDHAPTRVAVTAERALL 236
Query: 238 AELDGSCKSAIAG--FAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
A L+G C+ I + T+ + ++++ DG + + G + A+
Sbjct: 237 AALEGGCQVPIGAAVLEEPEYGTI-LHAVIVSLDGSSAVRGGYPVDHANPAASGIELARQ 295
Query: 296 IRFISNKNVF 305
+R +
Sbjct: 296 LRAAGGAQIL 305
>gi|118467030|ref|YP_883768.1| porphobilinogen deaminase [Mycobacterium avium 104]
gi|158512461|sp|A0QLI0|HEM3_MYCA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118168317|gb|ABK69214.1| porphobilinogen deaminase [Mycobacterium avium 104]
Length = 315
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGVRDALIAR----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLGELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEDGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|260494552|ref|ZP_05814682.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33]
gi|260197714|gb|EEW95231.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33]
Length = 302
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 146/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P I + T GD+ +++
Sbjct: 1 MKKNIIIGSRGSILALAQADFIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDVS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE+ L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQGLLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKIGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F
Sbjct: 178 GMTDKITEYLSGEVFPPAPAQGVLYIQCRENDKEIKEILKTIHNENVAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F V + GK + I AA+ I+
Sbjct: 238 FDGGCHTPMGCYSQVNGDKIKFTA-VYSDKGKQ-IRAVIEDDLTKGKEIAYMAAEKIKNK 295
Query: 300 SNKN 303
NK
Sbjct: 296 INKG 299
>gi|151941802|gb|EDN60158.1| phorphobilinogen deaminase [Saccharomyces cerevisiae YJM789]
Length = 327
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + + P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEEKY--PDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115
K L+T+E+E L ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ + I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR----CDA 285
ERA + L+G C I + T L IV+ +G E D+
Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDKIEMLIENVKEDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
+ G+ A+ + K + +
Sbjct: 299 MACGKILAERMIADGAKKILD 319
>gi|41410101|ref|NP_962937.1| porphobilinogen deaminase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254777076|ref|ZP_05218592.1| porphobilinogen deaminase [Mycobacterium avium subsp. avium ATCC
25291]
gi|55976459|sp|Q73SS0|HEM3_MYCPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|41398934|gb|AAS06553.1| HemC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 315
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGVRDALIAR----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + G +D AVHS KD+PT ++A R D RD ++ L +L S
Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLAELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C
Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S G A +G A +
Sbjct: 236 APVGAIAEVVESIDEDGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|326472408|gb|EGD96417.1| porphobilinogen deaminase [Trichophyton tonsurans CBS 112818]
gi|326481632|gb|EGE05642.1| porphobilinogen deaminase [Trichophyton equinum CBS 127.97]
Length = 331
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 18/320 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L+ + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDALVA--RWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKRGQPKTTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + KG L IV + DGK E+ ++ N A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCNVQTPEQAE 302
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G+ A + +
Sbjct: 303 AFGKAVADEMVEKGAGKILE 322
>gi|195490377|ref|XP_002093114.1| GE21148 [Drosophila yakuba]
gi|194179215|gb|EDW92826.1| GE21148 [Drosophila yakuba]
Length = 653
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 150/319 (47%), Gaps = 23/319 (7%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I
Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118
Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+ SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA
Sbjct: 119 HTIASLPQGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E
Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
R+FL L G C + +A ++ KG L G V + DG I +
Sbjct: 239 RSFLKTLGGGCSAPVAVWSTLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298
Query: 285 AINIGRDAAQYIRFISNKN 303
G R +
Sbjct: 299 QKLEGEQ-----RKRGAQE 312
>gi|327469193|gb|EGF14665.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK330]
Length = 306
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 108/303 (35%), Positives = 161/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + L P+ QGA+ +E + + +L+ + E T V ERA LA
Sbjct: 179 LDQSHLHIQPLETSLCLPAISQGALAVECREEDKELLQLLATVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA KG ++ DG+ + D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKKGQDYQLEAMLAKEDGQCVF---VSLKGQDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|145294537|ref|YP_001137358.1| porphobilinogen deaminase [Corynebacterium glutamicum R]
gi|158513580|sp|A4QB59|HEM3_CORGB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23507698|gb|AAN38291.1| porphobilinogen deaminase [Corynebacterium glutamicum]
gi|140844457|dbj|BAF53456.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 302
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 10/304 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA A R L + + ++T GD + + IG G+F
Sbjct: 2 TLKIGTRGSKLATTQAGTIRDQLK----YFGRDAELHIVTTPGDVNMS-PVERIG-VGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L +GE D AVHS KD+PT + R D R+ I+ +L +L
Sbjct: 56 TQALRDVLHAGECDVAVHSMKDLPTAADPRFHL-VVPTRADSREALIARDGLTLAELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C
Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A G T+ V A DG S G+ +G AQ +
Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQLIDAGA 294
Query: 302 KNVF 305
N+
Sbjct: 295 ANLL 298
>gi|19551663|ref|NP_599665.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|62389318|ref|YP_224720.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|25453022|sp|Q8NT90|HEM3_CORGL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|21323183|dbj|BAB97811.1| Porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032]
gi|41324652|emb|CAF19134.1| PORPHOBILINOGEN DEAMINASE [Corynebacterium glutamicum ATCC 13032]
Length = 302
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 89/304 (29%), Positives = 142/304 (46%), Gaps = 10/304 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA A R L + + ++T GD + + IG G+F
Sbjct: 2 TLKIGTRGSKLATTQAGTIRDQLKHY----GRDAELHIVTTPGDVNMS-PVERIG-VGVF 55
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+ + L SGE D AVHS KD+PT + R D R+ I+ +L +L
Sbjct: 56 TQALRDVLHSGECDVAVHSMKDLPTATDPRFHL-VVPTRADSREALIARDGLTLAELPEG 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ +
Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C
Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234
Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+ +A A G T+ V A DG S G+ +G AQ +
Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQLIDAGA 294
Query: 302 KNVF 305
N+
Sbjct: 295 ANLL 298
>gi|147920614|ref|YP_685587.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I]
gi|121683115|sp|Q0W5T2|HEM3_UNCMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|110620983|emb|CAJ36261.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I]
Length = 303
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 144/299 (48%), Gaps = 6/299 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LALA A + R L + I + T GD + L + G G F
Sbjct: 1 MRIGTRGSKLALAQAEKVRRLLKEQ----GVEATITVIKTSGDVQKDSPLYMMKGYGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ L+ E+D AVHS KD+PT + L +A L RE DV + A+ L DL +
Sbjct: 57 REIDDLLLKNEVDLAVHSLKDIPTVRPENLVTAAVLKRESALDVAVIRNAERLADLPEGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR A++ R + D RG ++TRL KL + + AILLA AG+ RL + +
Sbjct: 117 VVGTSSTRRAAMIYRHYPGLVTKDIRGNVDTRLRKLRDGEYDAILLAEAGLIRLGLDLKV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ +F P+ QG I I P+A E+VK +N E TW ER A LDG C
Sbjct: 177 -ERLDPYNFVPAANQGVIAIVARQGTPEA-EVVKELNDETTWIETRVERIIAAGLDGGCV 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ +A G + G VL+ DG+ V + ++ + +
Sbjct: 235 VPMGVYATRVGDEIDVIGEVLSLDGRQQVRVRETIPVAGCEEHAKQVSEKLVLAGGLKL 293
>gi|167761211|ref|ZP_02433338.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704]
gi|167660877|gb|EDS05007.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704]
Length = 803
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 7/293 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +G+R S LA+ + + H P + ++ + T GD+ + TL +IGG
Sbjct: 1 MS-RKIVVGSRESRLAIIQTEKVMEHIRRSH--PKIELEMMTMETTGDKRLDVTLDQIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E++K L+ G ID AVHS KDMP K + I Y PRED+RDV + + +++
Sbjct: 58 KGLFVKELDKALLDGRIDLAVHSLKDMPMDESKVIPIVRYSPREDVRDVLVLP--KGVEE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+IG SS RR+ R + RG + TRL KL+ + A++LA AG+KRL
Sbjct: 116 WDGRGIIGCSSFRRRIQAKRLFKEAEFRSVRGNVITRLEKLDRGEYDALILAAAGLKRLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I + ++ P+ GQG + ++ + ++ ++ ERAF+ L
Sbjct: 176 LEYRISRYFSTDEILPAAGQGTMAVQ--GRIDMNYDFLEGYGKKEDAYIAKGERAFVRYL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
DG C S +A + L G+ + + S++G +A IGR+ A
Sbjct: 234 DGGCSSPVAAYGEVIDGQLLMKGLYYMEETGNYAIGSKSGPVEEAEKIGRELA 286
>gi|126433281|ref|YP_001068972.1| porphobilinogen deaminase [Mycobacterium sp. JLS]
gi|126233081|gb|ABN96481.1| hydroxymethylbilane synthase [Mycobacterium sp. JLS]
Length = 314
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 144/316 (45%), Gaps = 17/316 (5%)
Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M P RIGTR S LA A R +L+ H ++ +ST+GDR + +I
Sbjct: 1 MSNADTPIRIGTRASLLATTQAGTIRDALIGR----GHAAELVLISTEGDRNQG-PIADI 55
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G+FT + + + G +D AVHS KD+PT + I A RED RD ++ L
Sbjct: 56 G-VGVFTAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVL 114
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R
Sbjct: 115 GELPAGSTVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLAR 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + + E L P+P QGA+ +E + L+ ++ DT +V ER LA
Sbjct: 175 IGRLGDVTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLA 234
Query: 239 ELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
EL+ C + + A + G V A DG S G A ++G
Sbjct: 235 ELEAGCSAPVGAIAEVVESIDEDGRVFEEVSLRGCVAALDGSDVIRASGIGTPGRAADLG 294
Query: 290 RDAAQYIRFISNKNVF 305
A + + + +
Sbjct: 295 VSVAAELFELGARELI 310
>gi|11498841|ref|NP_070070.1| porphobilinogen deaminase [Archaeoglobus fulgidus DSM 4304]
gi|6225498|sp|O29026|HEM3_ARCFU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|2649337|gb|AAB90000.1| porphobilinogen deaminase (hemC) [Archaeoglobus fulgidus DSM 4304]
Length = 289
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 13/296 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LALA + L + + + I + T GD + ++ L E G G F
Sbjct: 2 KLIVGTRGSKLALAQTNKVAERLKERY-----EVEIRIVKTAGDIMKDKPLYEFKGMGAF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++ L G++D AVHS KD+P++ ++G ++A + R+ DV IS +L++L
Sbjct: 57 VRALDTALAEGKVDVAVHSFKDVPSQRVEGTVVAAVIERDSPCDVLISRDGSTLEELDEG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A L R R D+ + RG ++TRL KL AI++A AG+KRL ++
Sbjct: 117 AVVGTSSLRRRAQLSRLRGDLRFENLRGNLDTRLRKLREGNYDAIVVAEAGLKRLGLDRE 176
Query: 185 -IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ E P QG I I T ++LV +N E TW ERA + EL
Sbjct: 177 VEYQPFPPEVIVPPANQGIIAIAT---RKGEEDLVAFLNDEKTWLEAMVERAVIKELGVG 233
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + +A + S + +L K + V ++ A+ + + +R
Sbjct: 234 CAVPVGVYAEAQ-SRVRLICEILD---KKYLRVEEKLSKDTAVEEAAEIGKDLRKE 285
>gi|241762462|ref|ZP_04760539.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241372964|gb|EER62631.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 308
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 153/300 (51%), Gaps = 7/300 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+
Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I + + L
Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIGIPSLEV--LPYS 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GT+S RR A + R DI + RG I+TRL KL N + A LLA AG+ RL + V
Sbjct: 122 GCVGTASPRRAAQIRCIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ++ P+ GQGAI IE + A E V +I+H T +V ER L L+ C
Sbjct: 182 GYD-VPLDQMLPAAGQGAIGIEAL-ADSAAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
S IA FA + + +GK S + + + + S V
Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGK--FSASIDKEISQPSD-AFEVGSLLLNQSPPEV 296
>gi|310794330|gb|EFQ29791.1| porphobilinogen deaminase [Glomerella graminicola M1.001]
Length = 347
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 145/317 (45%), Gaps = 18/317 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA+ A L P + I + T GD+ L GGKGL+T
Sbjct: 13 IHVGTRKSALAMKQAEIVVEGLSKAR--PDVSFEIHGMQTLGDKDQITALYNFGGKGLWT 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTAQSL 118
E+E KL + EID VHS KDMPT L G + RED RDV + H ++L
Sbjct: 71 SELEAKLAAKEIDIIVHSLKDMPTTLPDGCTLGCVTKREDPRDVVVFKAGLAEKHGWKTL 130
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
DL SVIGTSS+RR A L R + D RG IETRL K ++ AI+LA AG+
Sbjct: 131 ADLPEGSVIGTSSVRRIAQLKRRYPGLKFADVRGNIETRLRKCDDPEGPFSAIILAAAGL 190
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R+ I + L E+ + GQGA+ IE + + ++K + + T + ER
Sbjct: 191 LRMDYGARISQFLESENSGTLHAVGQGALGIEARTGDERVLAVIKELEDKPTMLACFAER 250
Query: 235 AFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIG 289
+ + L+G C I G L V+ +DG + V +A + G
Sbjct: 251 SVMRTLEGGCSVPIGVETTWVEDGKKLRLKATVVHADGTRGVDTEMVEVITTAEEADDFG 310
Query: 290 RDAAQYIRFISNKNVFN 306
+ AQ + + + +
Sbjct: 311 KVVAQALVDRGAQQILD 327
>gi|255526355|ref|ZP_05393269.1| porphobilinogen deaminase [Clostridium carboxidivorans P7]
gi|255509932|gb|EET86258.1| porphobilinogen deaminase [Clostridium carboxidivorans P7]
Length = 290
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 98/294 (33%), Positives = 153/294 (52%), Gaps = 6/294 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR S LA L + H + + T GD+I + +L++IGGKGLF
Sbjct: 2 KLKIATRRSQLAQVQTETIMKILKENHN---VEAEKLLVETTGDKILDVSLSKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE L+ + D AVHS KD+P + I + PRED+RD F+S K+L
Sbjct: 59 IKEIEVALLEDKADAAVHSMKDVPFDVPDMFDIVSIPPREDVRDAFVSMNGVHFKELKKG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS RR A + R D+ ++ RG ++TR++K+ I+LA AG+KR+ E +
Sbjct: 119 AKIGTSSNRRAAQVKLLRPDLEIVPIRGNVQTRISKIEKENLDGIILAAAGLKRMNMENI 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++ + P+ GQGA+ IET N +++ K + E+T V ER+F+ L+G C
Sbjct: 179 ITDYFDVNEMVPAVGQGALGIETK-KNSVNEDIFKKMEDENTRICVEAERSFMRTLNGDC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A +T+ G + G + GN+ D + +G A+ I
Sbjct: 238 HSTIGAYAQINENTISIIG-IFQV-GDNLIKRDIAGNKEDYMELGYKLAKKIIE 289
>gi|29831283|ref|NP_825917.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680]
gi|39931482|sp|Q82E76|HEM31_STRAW RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName:
Full=Hydroxymethylbilane synthase 1; Short=HMBS 1;
AltName: Full=Pre-uroporphyrinogen synthase 1
gi|29608398|dbj|BAC72452.1| putative porphobilinogen deaminase [Streptomyces avermitilis
MA-4680]
Length = 324
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 85/322 (26%), Positives = 151/322 (46%), Gaps = 22/322 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ R+GTR S LA+A + + ++ V P + ++ ++T GD L +IGG
Sbjct: 1 MSEQALRLGTRRSKLAMAQSGQVADAVRQVTGRP---VELVEITTYGDTSR-EHLAQIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + ++
Sbjct: 57 TGVFVTALRDALLRGEVDFAVHSLKDLPTAQPDELALAAVPVREDPRDVLVARDGLTFEE 116
Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILL 171
+ +GT S RR A L + + RG +++R+ + + + ++L
Sbjct: 117 LGAPSPKGTARVGTGSPRRMAQLNAYARSHGLAVETVPIRGNVDSRIGYVRSGELDGVVL 176
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ + + E L ++ P+PGQGA+ IE +N + ++ T +V
Sbjct: 177 AAAGLHRIGRIDEVTEFLPVDTVLPAPGQGALAIECAADNADLIAALAELDDPFTRAAVT 236
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---- 282
ER+ LA L+ C + + A + G+V +DG ++S G
Sbjct: 237 AERSLLAALEAGCSAPVGALADLLADGQIVTEMRLRGVVGTTDGSTLVQLSTTGPVPETH 296
Query: 283 CDAINIGRDAAQYIRFISNKNV 304
A+ +GR+ A + +
Sbjct: 297 DQAMALGRELAAEMLAKGAAGL 318
>gi|302511047|ref|XP_003017475.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS
112371]
gi|291181046|gb|EFE36830.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS
112371]
Length = 331
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 150/320 (46%), Gaps = 18/320 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L+ + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDALVA--RWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + G L IV + DGK E+ ++ + A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVPNASGNGEMLRLRCIVTSIDGKEAVEIEKDCHVQAPEQAE 302
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G+ A + +
Sbjct: 303 EFGKAVADEMVEKGAGKILE 322
>gi|119587854|gb|EAW67450.1| hydroxymethylbilane synthase, isoform CRA_d [Homo sapiens]
Length = 321
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 94/338 (27%), Positives = 138/338 (40%), Gaps = 75/338 (22%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQ
Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQ------------------------------------- 217
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284
+G C +A K LY G V + DG + + +G D
Sbjct: 218 ---EGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 274
Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 275 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 312
>gi|115399989|ref|XP_001215583.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
gi|114191249|gb|EAU32949.1| porphobilinogen deaminase [Aspergillus terreus NIH2624]
Length = 337
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 19/319 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R SL V P + I+ L T GDR L G K L+
Sbjct: 11 PLRIGTRRSNLAMVQAEGIRDSLQKV--APDRSYEIVALRTLGDRDKQTALYNFGAKNLW 68
Query: 65 TEEIEKKLISGEIDCAVHSA------KDMPTKLLKGLQISAYLPREDIRDVFISH---TA 115
T E+E+KL SGE+D VH DMPT L Q++A PR+D RD I
Sbjct: 69 TTELEEKLTSGELDVIVHCLKDQLTAPDMPTTLPDTCQLAAIPPRDDPRDALIVKASLPY 128
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAY 173
SL+ L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++
Sbjct: 129 TSLQSLPAGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIMSA 188
Query: 174 AGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
AG++R+ + I + L D + GQGA+ +E + + EL+ + + +
Sbjct: 189 AGLERVGLQYRINQYLGSRDGGILHAVGQGALGLEIRKGDAQMLELLGQLADRKSTLACL 248
Query: 232 CERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAIN 287
ER+ + L+G C I L + IV++ DG E S G +A
Sbjct: 249 AERSLMKTLEGGCSVPIGVETEWLSSGDLRMHSIVVSLDGTQCVEDSITSKVGTDDEAAA 308
Query: 288 IGRDAAQYIRFISNKNVFN 306
G + A + + N
Sbjct: 309 FGEELAARLVKAGAGQILN 327
>gi|284034243|ref|YP_003384174.1| porphobilinogen deaminase [Kribbella flavida DSM 17836]
gi|283813536|gb|ADB35375.1| porphobilinogen deaminase [Kribbella flavida DSM 17836]
Length = 294
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 147/298 (49%), Gaps = 10/298 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR S LA A A +L ++ H + ++P+ T GD L +IGG G+F
Sbjct: 2 IKLGTRRSALATAQAALVADALRNL----GHEVDLVPIVTTGDVNR-APLEQIGGTGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++GEID AVHS KD+PT + GL + A RED RDV ++ +L +L +
Sbjct: 57 SALRDALLAGEIDIAVHSLKDLPTAPVDGLTLGAIPVREDPRDVLVARDGLTLGELQTGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GT S RR A L + + RG ++TR+ + + K A++LA AG+ RL + I
Sbjct: 117 LVGTGSPRRVAQLEALGLGLELTGIRGNVDTRIAMVADGKVDAVVLARAGLARLGRLAEI 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+PGQGA+ IE ++ + ++ T +V ER LA L+ C
Sbjct: 177 TETLDPIQMLPAPGQGALGIECRSDDTAVLAALAPLDDPGTRAAVTAERQLLATLEAGCT 236
Query: 246 SAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ + A L+ G + DG +S NG+ D +GR A +
Sbjct: 237 APVGALAEVVDGEDGPELWLRGALG-EDGGGVRRLSANGSVDDPAAVGRALANELLEQ 293
>gi|328474912|gb|EGF45712.1| porphobilinogen deaminase [Listeria monocytogenes 220]
Length = 288
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 107/285 (37%), Positives = 156/285 (54%), Gaps = 7/285 (2%)
Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83
+ L + + P + I + TKGDRI + TL+++GGKGLF E+E+ L ID AVHS
Sbjct: 2 INKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHS 59
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KD+P+ L +GL I A RE D F+ + SL +L SVIGTSSLRR A LL+ R
Sbjct: 60 MKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELPQGSVIGTSSLRRAAQLLKHRP 119
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK---EKVIKEILNIEDFPPSPGQ 200
D + RG I+TRL KL+ AI+LA AG+ R+ + E + E P+ GQ
Sbjct: 120 DFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWLENTTLKLEDIPPELCLPAVGQ 179
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
GA+ IE ++ + ++++ I+HE+T V ER FL +L+G C+ IAGFA ++
Sbjct: 180 GALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEVVH 239
Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
F G+V +DG I + G + IG A+ + +
Sbjct: 240 FKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLSEGADTII 282
>gi|302662015|ref|XP_003022667.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum
HKI 0517]
gi|291186626|gb|EFE42049.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum
HKI 0517]
Length = 331
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 150/320 (46%), Gaps = 18/320 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L+ + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDALVA--RWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + G L IV + DGK E+ ++ + A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGNGEMLRLRCIVTSIDGKEAVEIEKDCHVQAPEQAE 302
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G+ A + +
Sbjct: 303 EFGKAVADEMVEKGAGKILE 322
>gi|332363838|gb|EGJ41617.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK355]
Length = 306
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I + Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQSGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + + L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|148259148|ref|YP_001233275.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5]
gi|146400829|gb|ABQ29356.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5]
Length = 333
Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats.
Identities = 108/312 (34%), Positives = 156/312 (50%), Gaps = 11/312 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMD---VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P R+GTR SPLAL ++L + P +ST GDR+T+R L EIGGK
Sbjct: 20 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 79
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114
GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I +
Sbjct: 80 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 139
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A
Sbjct: 140 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 199
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER
Sbjct: 200 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 259
Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
A LA LDGSC++ I G A L+ G+ DG + S N DA+ +G +
Sbjct: 260 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAVRLGAELG 319
Query: 294 QYIRFISNKNVF 305
+R S ++F
Sbjct: 320 ASLRRDSPADIF 331
>gi|227502550|ref|ZP_03932599.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725]
gi|227076712|gb|EEI14675.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725]
Length = 295
Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 143/298 (47%), Gaps = 8/298 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LA A R L+D + + ++T GD + IG G+FT+
Sbjct: 4 IGTRGSKLATTQAGHVRDWLIDA----GFDSELHIVTTAGDTNM-APVERIG-VGVFTQA 57
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+ + L GE D AVHS KD+PT ++ R+D R+V ++ +L L + +
Sbjct: 58 LREALCRGECDIAVHSFKDLPTAEDDRFRL-VIPQRQDSREVLVARDGMTLMQLPEGARV 116
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTS+ RR + L R D+ + RG I+TR++K+ + + A++LAYAG+ R E +
Sbjct: 117 GTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRASD 176
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
I + E F P+P QGA+ IE A L V++ E + ERA LA L+ C +
Sbjct: 177 IFDPELFMPAPAQGALAIEAVAGTEAAAALDAVVD-EQATAAALAERAVLARLEAGCTAP 235
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A + G L G V A DG + +G +A +G + + ++
Sbjct: 236 VAATSRWNGDQLTVRGGVFALDGSRQLTATASGTAAEAAELGARVSDELFAQGAADLL 293
>gi|160879927|ref|YP_001558895.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
gi|160428593|gb|ABX42156.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg]
Length = 301
Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 144/305 (47%), Gaps = 8/305 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+K+ +G+R S LA+ + P + ++ L T GD I +++L +IGG
Sbjct: 1 MKKQKIVVGSRDSKLAVMQTELIMHEI--NRNNPEIELELVTLKTTGDLILDQSLDKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E++ L+ G ID AVHS KDMP + K L I A R D RDV + +
Sbjct: 59 KGLFVKELDLALLDGRIDIAVHSLKDMPMEENKELPIVALPKRGDARDVLVLPKGCEFIE 118
Query: 121 LA----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
+ IG+SS RRK + + RG + TRL+KL+ + +++LA AG+
Sbjct: 119 YEDMNLYYQNIGSSSARRKLQIQKLLPSAGTSGVRGNVITRLDKLDRGEYTSLILAAAGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+R+ I ++E+ P+ GQG + I+ + ++ I +T + ER+F
Sbjct: 179 QRVGLPHRISHYFSVEEMIPAAGQGILSIQA--RRDLNVDFLENIKDANTTYASLAERSF 236
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ LDG C S IA +A +G L G+ + ++ A +G A +
Sbjct: 237 VRTLDGGCSSPIAAYAAVEGEELKLVGLYYNEKTTEHRVATVVDHKERAERVGEQLALRL 296
Query: 297 RFISN 301
R
Sbjct: 297 RGEIG 301
>gi|260941880|ref|XP_002615106.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720]
gi|238851529|gb|EEQ40993.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720]
Length = 356
Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 158/319 (49%), Gaps = 17/319 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+IG R S LA+ + ++ + P + I+ L+T GD++ N+ L GGK
Sbjct: 13 NNHVQIGGRKSRLAVVQSEFVKAGIEA--NFPELSCSILALNTLGDKVQNKPLYSFGGKS 70
Query: 63 LFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---T 114
L+T+E+E L+ ++D VHS KDMPT L ++ + RED RD +
Sbjct: 71 LWTKELEILLLEAVGDYPQLDMIVHSLKDMPTNLPDEFELGCIVEREDPRDALVVKKGLP 130
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLA 172
+SL DL +V+GTSS+RR A LL+ + D RG I TRL+KL++ + ++LA
Sbjct: 131 FRSLSDLPPGAVVGTSSIRRSAQLLKNYPHLRFEDMRGNIATRLSKLDDPSSPFTCLILA 190
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
+G+ RL I L+ D + GQGA+ IE ++ +++ + H +
Sbjct: 191 ASGLLRLGLGDRISAPLDAPDMYYAVGQGALGIEIRKDDTVMLSVLRKLEHLPSAYCCYA 250
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAIN 287
ERA + L+G C + + T LYF GI+++ DGK E N+ +A
Sbjct: 251 ERAMMRMLEGGCSVPLGVKTHYNEQTQQLYFKGIIVSPDGKQSVEAEHTSIIYNKAEAEA 310
Query: 288 IGRDAAQYIRFISNKNVFN 306
+G + A+ + + K + +
Sbjct: 311 VGEEVARKLTHLGGKKILD 329
>gi|325693629|gb|EGD35548.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK150]
Length = 306
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 161/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + ++L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ + D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF---VSFQGQDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|329848284|ref|ZP_08263312.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19]
gi|328843347|gb|EGF92916.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19]
Length = 311
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 155/307 (50%), Gaps = 8/307 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIGGK 61
+IGTR S LAL + ++ + ++T+GDRI +R L E GGK
Sbjct: 4 LKIGTRGSKLALTQCGWVQRRIVAALGEDVARADEVAPLTVITTQGDRIQDRRLIEAGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT+EIE L+ G+ID AVHS KDMP + GL + A RED RD F+S ++L DL
Sbjct: 64 ALFTKEIEDALLRGDIDVAVHSLKDMPAADVPGLSLCAIPVREDPRDAFLSPNYETLADL 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT+S+RR+A L R D+ VI RG ++TRL KL A+LLA AG+ RL
Sbjct: 124 PQGARLGTASMRRQAQALAQRPDLQVIMTRGNVDTRLAKLQAGACDALLLAAAGLNRLGL 183
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I+ ++ + F +PGQGA+ I+ + ++ T+ + ER L L+
Sbjct: 184 SHHIRSHIDPDLFASAPGQGALAIQCR-TEDLGAGWMAKVHDVTTFLRIQAERGALEALE 242
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNGNRCD-AINIGRDAAQYIRF 298
SC++A+ +A + L + L++DG S + A ++G I+
Sbjct: 243 ASCRTAVGAYATLENDQLALFVEALSADGSKRWQRRESLSAPTAQSARDLGLKLGHEIKT 302
Query: 299 ISNKNVF 305
+ +
Sbjct: 303 EAGPELI 309
>gi|119587853|gb|EAW67449.1| hydroxymethylbilane synthase, isoform CRA_c [Homo sapiens]
Length = 304
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 94/337 (27%), Positives = 137/337 (40%), Gaps = 75/337 (22%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+
Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R
Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + +IL+ E+ + GQ
Sbjct: 179 MGWHNRVGQILHPEECMYAVGQ-------------------------------------- 200
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284
+G C +A K LY G V + DG + + +G D
Sbjct: 201 --EGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL 258
Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 259 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 295
>gi|166033239|ref|ZP_02236068.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC
27755]
gi|166027596|gb|EDR46353.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC
27755]
Length = 310
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 13/304 (4%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+GTR S LALA + L P ++ + T GD L +IG KG+F +
Sbjct: 4 RVGTRGSKLALAQTKQVIEKLKSA--FPEDEFDVVIIKTTGDMDQKSRLDQIGSKGIFVK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE++L+ +I AVHS KDMP GL + RED RDV I A S+ DL +V
Sbjct: 62 EIEEELLEEKIHLAVHSMKDMPDTTADGLIFAKAWKREDPRDVLILREAVSVDDLPKGAV 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK LL+ R D++++ RG ++TR+ K+ + I+LA AGI RL +E+ I
Sbjct: 122 IGTGSKRRKYQLLKIRPDLNIVGIRGNVDTRIRKMQEEEMDGIVLAVAGINRLGREQEIT 181
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L + P+P QG + +E +N + + ++ ++T V ER FL ++ GSC
Sbjct: 182 CYLEPDQMIPAPAQGTLALEVKADNIQLIRKLNRLSDQETDICVKAERQFLKQIGGSCHL 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDA-------INIGRDAAQY 295
+ + + L + DGK D+ I R+A +
Sbjct: 242 PVGAYCKIQDEKLVLRAMFGTEDGKKMAYTKVESAVLNKIEDSSQIDEICRQIAREAVEK 301
Query: 296 IRFI 299
I+
Sbjct: 302 IQMQ 305
>gi|257465835|ref|ZP_05630146.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
gi|315916992|ref|ZP_07913232.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
gi|313690867|gb|EFS27702.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
Length = 299
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 6/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K+ +G+R S LALA + L H P + I + T+GD+ + ++
Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L
Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR
Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++E+ + ER F
Sbjct: 179 VKLEEKITEYLDPTIFPPAPAQGALYIQCREKDTEVQKILQSIHNENLEKVLVVEREFSK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + ++ +G TL F+ + + ++ N +I R AAQ I
Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHEN--KRYQTKVVENLSKGKDIARMAAQEIEK 296
Query: 299 I 299
+
Sbjct: 297 M 297
>gi|225569053|ref|ZP_03778078.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM
15053]
gi|225161852|gb|EEG74471.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM
15053]
Length = 298
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 145/299 (48%), Gaps = 8/299 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ RIG+R S LA+ A + ++ P I+ + T+GD+I +R L GG
Sbjct: 1 MQS-IIRIGSRESRLAVKQAEIVKQAVER--NCPDIKAEIVTMKTEGDKILDRRLELAGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+EK L+ G ID VHS KD+P ++ + L + A+ RED RDV I
Sbjct: 58 KGLFVKELEKALLDGRIDICVHSLKDVPMEVPEDLPVVAFGEREDPRDVLIYKP--GRTS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ VIGTSS RR+ L R + RG ++TRL KL+ +LA AG+KRL
Sbjct: 116 IPEGGVIGTSSRRRELQLKRLYPSCTFRSIRGNVQTRLRKLSEEGFDGTVLAAAGLKRLH 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E+V + ++++ P+ GQG + ++ + + ER F A L
Sbjct: 176 MEEVAGRVFSVDEIIPAVGQGILAVQGRKGRDYSWLTS--FACGKSRAEAEAEREFAAAL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C S +A A +G+ L G+ G I+ +R G A +G A+ +R
Sbjct: 234 GGGCTSPVAAHAQAQGAELKLTGLYYC-GGDIYRTRTRTGETDRARQLGAALAEEMRRE 291
>gi|207723608|ref|YP_002254006.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum MolK2]
gi|207742664|ref|YP_002259056.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum IPO1609]
gi|206588811|emb|CAQ35773.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum MolK2]
gi|206594058|emb|CAQ60985.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase)
(hmbs) (pre-uroporphyrinogen synthase) protein
[Ralstonia solanacearum IPO1609]
Length = 302
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 99/293 (33%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E+E L G
Sbjct: 1 MWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKELEVALAEGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P +L G + A L RED RD F+S+ L L +V+GTSSLRR+A
Sbjct: 59 ADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGAVVGTSSLRREA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L + + RG ++TRL KL+ AI+LA AG+KRL + I+ ++ + P
Sbjct: 119 SLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERIRAVIASDVSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IET + Q + ++H T +V ERA L GSC+ +A FA+
Sbjct: 179 AAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQVPLAAFAHWTD 238
Query: 257 -STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305
L V + DG+ +A +G AQ + ++
Sbjct: 239 AGALRLRAFVASQDGRRKLAAEGEATPATLAEAEALGARVAQQMLDGGAWDIL 291
>gi|102139876|gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 328
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 160/301 (53%), Gaps = 32/301 (10%)
Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
R S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI
Sbjct: 54 RDSDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEI 113
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+ G ID AVHS KD+PT L +G + LP
Sbjct: 114 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLP-------------------------- 147
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
+SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + I
Sbjct: 148 -ASLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSI 206
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ I
Sbjct: 207 LSMEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPI 266
Query: 249 AGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVF 305
A +A K + F G++ + DG +E +R G D + +G+DA ++ + +
Sbjct: 267 AAYAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFY 326
Query: 306 N 306
+
Sbjct: 327 D 327
>gi|305679995|ref|ZP_07402805.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC
14266]
gi|305660615|gb|EFM50112.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC
14266]
Length = 298
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR S LA A R +L H P + ++T GD + IG G+FT+
Sbjct: 3 IIGTRGSLLATTQAGHVRDALTS-HGYPS---ELRIVTTTGDVNL-APVERIG-VGVFTQ 56
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
+ L++GE D AVHS KD+PT + + + RE+ RD I+ +L +L +V
Sbjct: 57 ALRDSLLAGECDIAVHSFKDLPTAVDERFHL-VVPHRENARDCLIARNNLTLAELPTGAV 115
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GT + RR A L R DI + RG I+TR+ K+++ + A++LAYAG+ R+ +
Sbjct: 116 VGTGAPRRIAQLKALRPDIHTVPLRGNIDTRMAKVHDGELDAVVLAYAGLSRVHRADEAT 175
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E+ + +F P+P QGA+ +E ++ + I + + ER LA L+ C +
Sbjct: 176 EVFDPLEFLPAPAQGALAVECRADDADTIAAITTIADPKAYACAHTERVVLARLEAGCTA 235
Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A +A + + + V+A DG + G A N+G A+ + ++
Sbjct: 236 PVAAYATVAADNIMTLHAAVIAVDGSATLRATAAGPIDTAENLGMTVARALLDDGASSLL 295
>gi|167769475|ref|ZP_02441528.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM
17241]
gi|167668443|gb|EDS12573.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM
17241]
Length = 295
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 7/297 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++G+R S LA+ A ++ + P + ++ + T GD+I +RTL +IGGKG
Sbjct: 1 MKHLKVGSRESRLAVIQAKLAMDAVRE--WDPEIELELVAMKTTGDKILDRTLDKIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF E++ L++G +D VHS KD+P L L ++ + R D RD + D A
Sbjct: 59 LFVRELDAALLNGMVDFTVHSCKDLPMDLDPRLPLAGFSKRADPRDALVLPNGVYELDPA 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
IG +S RR L + V RG ++TRL KL++ + A++LA AG+ RL E
Sbjct: 119 --KPIGCASARRAVQLKKLFPGQPVAPVRGNVQTRLQKLDDGQYAALVLAAAGLVRLGLE 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + ++ P+ GQG + ++ + + D+ D ERAF+ LDG
Sbjct: 177 DRITRYFSTDEMLPAAGQGILAVQARAG--ENASYLSAFFDRDSADCALAERAFVRRLDG 234
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C S A +A +G TL G+ + + G + G R +G + A+ I
Sbjct: 235 GCTSPTAAYATVQGETLTLRGMDVTAKGAPVF-DTILGPRSQGEALGIELAERILQK 290
>gi|167910007|ref|ZP_02497098.1| porphobilinogen deaminase [Burkholderia pseudomallei 112]
Length = 278
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 101/268 (37%), Positives = 153/268 (57%), Gaps = 2/268 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+ +A A +G L+ G V +DG
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGAR 278
>gi|146296661|ref|YP_001180432.1| porphobilinogen deaminase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|254800238|sp|A4XK06|HEM3_CALS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145410237|gb|ABP67241.1| hydroxymethylbilane synthase [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 290
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 6/296 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG R S L+ + +P+ TKGD ++L + G
Sbjct: 1 MKKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L
Sbjct: 58 VFVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGVGFYQLK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 118 PNAKIGTSSLRREVHLKNLRQDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLD 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I ++ + P PGQGAICIE ++P ++ IN D + ER L L G
Sbjct: 178 SHVSYIFDVNEITPCPGQGAICIECLKDSPYK-NILSKINDADAYIQTQFERLVLKFLGG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C S+I F +Y + +L+ G + S G++ D +++ + ++
Sbjct: 237 GCHSSIGVFCKTDQDKIYAFASILS--GDKLIKASIEGDKDDFLSLANKLSNMLKS 290
>gi|304315023|ref|YP_003850170.1| porphobilinogen deaminase [Methanothermobacter marburgensis str.
Marburg]
gi|302588482|gb|ADL58857.1| porphobilinogen deaminase [Methanothermobacter marburgensis str.
Marburg]
Length = 289
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 94/288 (32%), Positives = 146/288 (50%), Gaps = 6/288 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LAL L ++ I + TKGDRI + L + +GLFT E+
Sbjct: 4 GTRGSRLALVQTDHVIDMLSEIC---GERIERRIIKTKGDRIKDSQLYSMDSRGLFTREL 60
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ ++ E+D AVHS KD+P+ L L I+A PRE +V +S +L + +G
Sbjct: 61 DIAVLEEEVDFAVHSLKDVPSDLDPELVIAAVPPRESPNEVLVSRFD--WDELPPAAKLG 118
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSSLRR+A + + + RG I+TR+ K+ + HA ++A AG+KRL E IK+
Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMEGEVHATIMAEAGLKRLGLENYIKKR 178
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
+E F P+ GQGA+ + T + + ++ I H + V E+ L EL C+ +
Sbjct: 179 FTLEYFTPAAGQGALAVITR-RDSELMVSIEKITHYPSHQEVTAEKTLLRELGAGCQCPL 237
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A + Y ++L DG+I V+ G+ A IG+ AA+ +
Sbjct: 238 GVIARASDGKINLYAVLLTRDGEILKRVNVKGSVDKAEEIGKKAAKEM 285
>gi|332877010|ref|ZP_08444763.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332685118|gb|EGJ57962.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 290
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 100/297 (33%), Positives = 152/297 (51%), Gaps = 8/297 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP RIGTR S LAL A + L + + I+ + ++GD L E+G G
Sbjct: 1 MKPIRIGTRDSQLALWQAETVQYQLE----LLGYPTEIVGIKSEGDLELTTPLYEMGVTG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L+ GEID AVHS KD+PT L G+ + A L R + D+ + S D
Sbjct: 57 IFTKALDIALLKGEIDIAVHSMKDVPTLLPDGIAVGAVLERGNPHDILVYKGDVSDLDSR 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ + I TSSLRRKA L ++ + RG + TRL KL +N + A AG++R+ +
Sbjct: 117 V-ATIATSSLRRKAQWLHRYPHHTIENLRGNVNTRLQKLADNPWDGAIFAAAGLERI--D 173
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
K+ ++ L ++ P+P QGAI + H +N Q ++ I+ T+ ERAFL L+G
Sbjct: 174 KLPEDYLVLDWMLPAPAQGAIMVLAHEDNVDLQGILLKIHDGKTYIETQVERAFLRALEG 233
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + I +A G ++F G + + DGK V+ + D G A IR
Sbjct: 234 GCTAPIGAYAEFDGEQVHFKGGLWSEDGKQEALVNETFDHID-EFTGEWLASKIRDN 289
>gi|307187698|gb|EFN72670.1| Porphobilinogen deaminase [Camponotus floridanus]
Length = 357
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 109/352 (30%), Positives = 165/352 (46%), Gaps = 49/352 (13%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ R+G+R S LAL SL ++H P I+ ++TKGD+I +++L +IG K
Sbjct: 6 KRDVIRVGSRKSELALIQTKHVIQSLKELH--PKKEFEIVTMNTKGDKILDKSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFTEE+E L + ID VHS KDMPT L G+ + A L RED RD + K L
Sbjct: 64 SLFTEELEIALENDRIDFVVHSLKDMPTTLPAGMALGAILKREDPRDAVVMSKKFKSKKL 123
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
S+IGTSSLRR A L R + + + RG + TRL KL+ N AI+LA AG+
Sbjct: 124 SSLPKGSIIGTSSLRRSAQLSRNMPHLKIQNIRGNLNTRLKKLDDENGSYAAIILAAAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
KR+ E I ++L E+ + GQGA+ +E ++ + + L++ + +T CER+F
Sbjct: 184 KRMGWEDRISQLLEPEEALYAIGQGALGVECRESDWEIRSLLEPLFDVETTLRCVCERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----------------- 279
L L G C + +A + K + L G V + DG+ +
Sbjct: 244 LKTLGGGCSAPVAVSSCLKKNELTITGAVWSLDGQTLVTNTSKSKLYLPDDDGEPPRKCP 303
Query: 280 ------------GNRCD-----AINIGRDAAQYIRFISN--------KNVFN 306
G A +G+D A+ + + + N
Sbjct: 304 YQEPRLYCSVIPGKVSSISLLGAELLGKDLAKNLIEKNALDVMSQARDEILN 355
>gi|167918037|ref|ZP_02505128.1| porphobilinogen deaminase [Burkholderia pseudomallei BCC215]
Length = 276
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 153/266 (57%), Gaps = 2/266 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
+ +A A +G L+ G V +DG
Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDG 276
>gi|118576540|ref|YP_876283.1| porphobilinogen deaminase [Cenarchaeum symbiosum A]
gi|118195061|gb|ABK77979.1| porphobilinogen deaminase [Cenarchaeum symbiosum A]
Length = 311
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 92/302 (30%), Positives = 137/302 (45%), Gaps = 6/302 (1%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
+GTR S L+LA +L + + P + + T+GD +R L I KG+F +
Sbjct: 5 TVGTRGSRLSLAQTGHVLDALKEAN--PEDEYKVRRIKTQGDTD-DRPLFAIDQKGIFEK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EI++ + G D AVHS KD+PT+L GL ++ R DV +S L L +
Sbjct: 62 EIDRAVSEGGADFAVHSLKDVPTELAPGLVLACVPRRAAANDVLVSPGGSGLGSLPRGAT 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSSLRR + R RSD+ V RG IETR+ K+ A++LA AGI RL + V
Sbjct: 122 VGTSSLRRAVQVGRSRSDLHVKPVRGNIETRIAKVGAG-YDAVVLAEAGISRLGLD-VKY 179
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L E F PSPGQG++ + + ++ I + ERA + C+
Sbjct: 180 AALPEESFAPSPGQGSLALVARSGDAGTISMLNRIEDAASRAEAEAERALSERIGSGCRF 239
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV-F 305
+ A G L + DG V +G R +G A + ++
Sbjct: 240 PVGALARSAGELLTIRAEAFSVDGSRSVSVQASGPRGSPRKVGESAGNEMLERGAGDLAL 299
Query: 306 NF 307
N+
Sbjct: 300 NW 301
>gi|228472965|ref|ZP_04057722.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624]
gi|228275547|gb|EEK14324.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624]
Length = 315
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 155/306 (50%), Gaps = 13/306 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK RIGTR S LAL A + ++ L + + ++P+ ++GD + L E+G
Sbjct: 8 MKKTLRIGTRDSELALWQAKKVQTLLENF----GYTTSLVPVKSQGDLSLDIPLYEMGIT 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV +
Sbjct: 64 GVFTKVLDVAMLQGSIDIAVHSMKDVPTSLPKGIVKGAVLTRANVQDVLVYKDGLDFLSQ 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ I T SLRRKA LR V + RG I TRL+KL+ + H + A A ++RL +
Sbjct: 124 EQ-ATIATGSLRRKAQWLRRYPTHQVENLRGNIATRLHKLHEHSWHGAIFAAAALERLAQ 182
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + + L++E P+P QGAI ++P E + +IN ER FL L+
Sbjct: 183 DHL--QRLSLEWMTPAPAQGAILAVAMDSDPYTLEALSLINDPKADTETQIERRFLKRLE 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG---RDAAQYIRF 298
G C + I A +G TL F G + + DGK EV ++ +IG D AQ +
Sbjct: 241 GGCTAPIGAKATLEGDTLSFVGNLFSLDGKQAVEVRKSIPT---HSIGSFPEDCAQELLH 297
Query: 299 ISNKNV 304
+ +
Sbjct: 298 SGGEGI 303
>gi|325688053|gb|EGD30072.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK72]
Length = 306
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 161/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCVLGAISQREDVRDCLIFRQAGQTLANL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PQGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 EKV---IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ L P+ QGA+ +E + + ++L+ + E T V+ ERA LA
Sbjct: 179 MDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVSVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA A ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCSFPIAALARKNDQDYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|259489684|tpe|CBF90157.1| TPA: hydroxymethylbilane synthase, putative (AFU_orthologue;
AFUA_5G11760) [Aspergillus nidulans FGSC A4]
Length = 347
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F IGTR S LAL ++L + + P + I T GD+ T L + K
Sbjct: 14 SQKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTK 71
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+T+E+E L +G +D VHS KD+PT L + + RED RD +
Sbjct: 72 NLWTQELEDLLEAGSVDLIVHSLKDVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNMSL 131
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++LA AG+
Sbjct: 132 AEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAAGL 191
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL I + L+ + + GQGA+ IE + ++++ I H++T + ER
Sbjct: 192 LRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLAER 251
Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRC---DAI 286
+ L L+G C + + T L +V++ DG EV +G A
Sbjct: 252 SLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQSAE 311
Query: 287 NIGRDAAQYIRFISNKNVF 305
G A+ + +
Sbjct: 312 EFGVTVAKALVNEGAGKIL 330
>gi|315044601|ref|XP_003171676.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311344019|gb|EFR03222.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 335
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 21/323 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R++L+ + P + GD L E+ K
Sbjct: 6 RKTFTIGTRKSNLAVLQTEIVRNALIA--RWPDCQFNVHTRDAAGDLNKVTPLRELTSKN 63
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
L+TEE+E+ L++ E+D VHS KD+PT++ + ++ A++ RED RD + Q
Sbjct: 64 LWTEELEEMLLAKELDLVVHSLKDVPTQIPEACKLGAFMKREDPRDALVVKKGQPKTTLA 123
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A + R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 124 ELPAGSVVGTSSVRRTAQIGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 183
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R E I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 184 RTGYEDRISQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 243
Query: 236 FLAELDGSCKSAIAGFAYC---------KGSTLYFYGIVLASDGKIFHEVSRNG---NRC 283
L L+G C + + KG L IV + DG+ EV ++
Sbjct: 244 LLRTLEGGCSAPLGVETEWVPDASDASGKGELLRLRCIVTSVDGREAVEVEKDCGVQTPE 303
Query: 284 DAINIGRDAAQYIRFISNKNVFN 306
A G+ A + +
Sbjct: 304 QAEAFGKAVADEMVEQGAGKILE 326
>gi|257069787|ref|YP_003156042.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810]
gi|256560605|gb|ACU86452.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810]
Length = 337
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 99/335 (29%), Positives = 155/335 (46%), Gaps = 33/335 (9%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL + ++L+D H + ++ +ST+GDR L +IGG
Sbjct: 1 MTGASLRIGTRASDLALTQSGHVGAALVDGT---GHEVELVHVSTRGDRDRTSPLAQIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ G +D VHS KD+PT L+ + ++ Y PRED RD + +L
Sbjct: 58 TGVFVTAVRQALLDGTVDVVVHSCKDLPTAPLEEITLACYPPREDPRDALCARDGLTLAQ 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKR 178
L S +GT S RR A LLR R D+ V RG +ETRL + A++LA +G++R
Sbjct: 118 LPAGSRVGTGSPRRAAQLLRARPDLEVTGIRGNVETRLKRALGPEADLDAVVLAASGLRR 177
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHV----NNPKAQELVKVINHEDTWDSVNCER 234
+ +E VI E+L +E P+P QGA+ +E P E + ++ T +V ER
Sbjct: 178 VGREAVISELLPVEVMLPAPAQGALAVEATTAALAQEPWFAERLTAVDDPATRAAVTAER 237
Query: 235 AFLAELDGSCKSAIAGFAYCK-------------GSTLYFYGIVLASDGKIFHEVSR--- 278
L L+ C + +A +A + G L + + +DG E
Sbjct: 238 MLLRTLEAGCSAPVAAYAEIEAPGAATAEGEPAGGGVLRLRALAIRTDGSHVVEGEARMA 297
Query: 279 --------NGNRCDAINIGRDAAQYIRFISNKNVF 305
+G +G + A + ++
Sbjct: 298 LDLAADALSGPESVPAALGAELAADLLSRGAGDIL 332
>gi|324990199|gb|EGC22137.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK353]
Length = 306
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PKGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + + L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQNHQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|325108657|ref|YP_004269725.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305]
gi|324968925|gb|ADY59703.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305]
Length = 329
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 86/322 (26%), Positives = 147/322 (45%), Gaps = 22/322 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LAL A + L H P N+ ++ +ST+GD L +GG G+F
Sbjct: 7 TVRIATRSSELALWQATHVAALLRAEH--PDINVELVDVSTQGDADQRAPLWSMGGTGVF 64
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKL-LKGLQISAYLPREDIRDVFISHTA-------- 115
T+E+++ ++ G D AVHS KD+PT++ L ++A RE D +
Sbjct: 65 TKEVQRTVLDGMADLAVHSLKDLPTEIVDPDLTLAAVPEREQRWDALVLRNDLKGDVDPA 124
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L L + IG+ SLRR+A L R D+ +++ RG + TRL KL+ + AI+LA AG
Sbjct: 125 DPLASLQDGARIGSGSLRRRAQLRAQRPDLKLLEIRGNLNTRLRKLDEGEYDAIILATAG 184
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL + + L P+ GQGA+ +E ++ + ++L++ +N + + + ER
Sbjct: 185 LLRLGWNERLSCRLQPPVMFPAVGQGALGLECRTDDEQTRKLLESLNDPEARLATHAERR 244
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-----------RCD 284
L L C + + +VL+ DG + + + +
Sbjct: 245 LLNSLRAGCHAPVGVNCERAEGRFTLSSVVLSPDGAHQVDAEDSVDLGDDWANWQEKLSE 304
Query: 285 AINIGRDAAQYIRFISNKNVFN 306
+G A+ + + +
Sbjct: 305 VGKLGEKVAEVLLEHGAQELIE 326
>gi|255953953|ref|XP_002567729.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589440|emb|CAP95584.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 339
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K IGTR S LAL +L P + I T GD T L + K
Sbjct: 7 TQKTITIGTRKSKLALLQTNLVLDALKKA--FPQYEYKIFSKETAGDLNTTIALRDFNTK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+TEE+E+ +I G++D VHS KD+PT L ++ +PRED RDV + +SL
Sbjct: 65 NLWTEELEELMIDGQVDIIVHSLKDVPTTLPSSCKLGPSMPREDSRDVLVVKQGLPYKSL 124
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
++ SV+GTSS+RR A L R + V D RG I TRL+KL+ I+LA AG+
Sbjct: 125 SEIPAGSVVGTSSIRRTAQLARKYPHLKVQDVRGNIGTRLSKLDAEDSPYACIILAAAGL 184
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL I + L+ ++ + GQGA+ IE + +++ I H+DT SV ER
Sbjct: 185 LRLDLADRITQYLDSKNSGMLYAVGQGALGIEIRKEDTVLHDMLDKIGHQDTTFSVLAER 244
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
+ L L+G C + + + L +V++ DGK +V + A
Sbjct: 245 SLLRTLEGGCSAPLGVETGWVQNAQGAKQLRMRSVVVSVDGKECAQVELEADVTSAESAE 304
Query: 287 NIGRDAAQYIRFISNKNVF 305
G A+ + ++
Sbjct: 305 AFGITVAKALVADGAGDIL 323
>gi|83313519|ref|YP_423783.1| porphobilinogen deaminase [Magnetospirillum magneticum AMB-1]
gi|82948360|dbj|BAE53224.1| Porphobilinogen deaminase [Magnetospirillum magneticum AMB-1]
Length = 262
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 106/256 (41%), Positives = 159/256 (62%)
Query: 51 TNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
+R L EIGGKGLFT+E+++ ++SG I AVHS KD+PT+L G+ + LPRED+RD F
Sbjct: 2 QDRPLAEIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTQLPDGIVLPCILPREDVRDAF 61
Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
+S SL +L +V+GTSSLRR A +L R D+ V++FRG ++TRL KL A +
Sbjct: 62 LSLKVGSLAELPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLEEGVVDATM 121
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
LA AG++RL + L+ +D P+ QGAI I ++ + + + +N D++ V
Sbjct: 122 LAMAGLRRLGLAQHATSALSEDDMLPAVAQGAIGITCRADDQASLDYLAALNCPDSFVRV 181
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290
ERAFL LDGSC++ IA A G L F G++++ DG H +R+G+R DA +G+
Sbjct: 182 AAERAFLTRLDGSCRTPIAALAELDGDRLSFRGLIVSPDGTTVHATARSGSRADAEAMGK 241
Query: 291 DAAQYIRFISNKNVFN 306
DAA+ + ++ F+
Sbjct: 242 DAAEELIKVAGPGFFD 257
>gi|304317047|ref|YP_003852192.1| porphobilinogen deaminase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778549|gb|ADL69108.1| porphobilinogen deaminase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 297
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 152/299 (50%), Gaps = 10/299 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K R+GTR S LAL + + P I+ +STKGD + N L+EIGGKG
Sbjct: 1 MKKIRVGTRSSELALTQTLIVINEIKKYK--PNIEFEIVKISTKGDSVLNAPLSEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE LI+ EID AVHS KDMP ++ L++ + RED RDVFIS + + DL
Sbjct: 59 LFVKEIEDALINNEIDMAVHSMKDMPYEVPNDLKLLSVYRREDPRDVFISRSEKF-IDLK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ IGTSSLRR L R DI ++ RG I TR+ K++ I+LA +GIKRL E
Sbjct: 118 NNARIGTSSLRRSVQLKNLRPDIEIVPIRGNIATRIKKMHELNLDGIVLAASGIKRLGLE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAELD 241
+IK+ ++ P+P QG + +E + + E+ ++ T+ + ER + +
Sbjct: 178 DMIKDYFPVDLIVPAPCQGILAVEIRRDFEEEFFEIYPMLLDAKTFFESSAERKIMKKFG 237
Query: 242 GSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G+CK + ++ K + DGK + G D IG + I
Sbjct: 238 GNCKIPLGIYSEYKRNGNDDLITVRVSYYK-DGK-LIKGRETGLMRDIDKIGDRLVEKI 294
>gi|225548234|ref|ZP_03769519.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM
10507]
gi|225040673|gb|EEG50919.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM
10507]
Length = 291
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 96/295 (32%), Positives = 146/295 (49%), Gaps = 8/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIG+R S LA+ + ++ L + II + T GD I +RTL +IGGKG
Sbjct: 1 MNTIRIGSRESKLAVIQSELVQNYLRAQ----GLDAQIITMKTTGDIILDRTLDQIGGKG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+++ L+ G D +VHS KD+P ++ + L + AY RED RDV I + D
Sbjct: 57 LFVKELDRALLDGRSDLSVHSLKDLPMEVAQDLPVVAYSKREDPRDVLILPQGEKELD-- 114
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L IG+SSLRR L + + RG + TRL KL++ + A++LA AG+KRL +
Sbjct: 115 LSKPIGSSSLRRCIQLKKLFPEAECKSVRGNVLTRLEKLDSGQYSALVLAAAGVKRLGLQ 174
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I +E+ P+ GQG + ++ + N ERAF+ LDG
Sbjct: 175 GRISRYFTVEEMLPAAGQGILAVQGKAGQD--YSYLGAYNDRQAQAEALAERAFVRWLDG 232
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S +A A C+G L G+ +H+ G A +G + A+ ++
Sbjct: 233 GCSSPVAAHAVCQGERLQMTGLYYHDLTGQWHKEQIAGETSQAKMLGVELAKRMK 287
>gi|34762659|ref|ZP_00143651.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887680|gb|EAA24757.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 302
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P I + T GD+ ++I
Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDIS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKVGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F + L GK + + I AA+ I+
Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAYMAAEEIKNK 295
Query: 300 SNKN 303
NK
Sbjct: 296 INKG 299
>gi|195336557|ref|XP_002034902.1| GM14404 [Drosophila sechellia]
gi|194127995|gb|EDW50038.1| GM14404 [Drosophila sechellia]
Length = 651
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 150/319 (47%), Gaps = 23/319 (7%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I
Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118
Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+ SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA
Sbjct: 119 HTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E
Sbjct: 179 AGLLRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
R+FL L G C + +A ++ KG L G V + DG I +
Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNQNSQELGLSLTGAVWSLDGAIEIRNHLACALNE 298
Query: 285 AINIGRDAAQYIRFISNKN 303
G R +
Sbjct: 299 QKLEGDQ-----RKRGAQE 312
>gi|262067556|ref|ZP_06027168.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC
33693]
gi|291378731|gb|EFE86249.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC
33693]
Length = 302
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 107/296 (36%), Positives = 148/296 (50%), Gaps = 7/296 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK +G+R S LALA A +++L + P + I + T GD+ +++
Sbjct: 1 MKKNIIMGSRGSILALAQANLVKNNLEANY--PELSFEIKEIVTSGDKDLKSNWENSDVS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAVSPKGLICGAIPDREDPRDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPKGAKIGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F
Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAVAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
DG C + + ++ G + F V + +GK + N I AA+
Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IKAVVEDNLAKGKEIAYMAAEE 291
>gi|326402301|ref|YP_004282382.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301]
gi|325049162|dbj|BAJ79500.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301]
Length = 335
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 108/312 (34%), Positives = 155/312 (49%), Gaps = 11/312 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMD---VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
P R+GTR SPLAL ++L + P +ST GDR+T+R L EIGGK
Sbjct: 22 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 81
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114
GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I +
Sbjct: 82 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 141
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A
Sbjct: 142 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 201
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER
Sbjct: 202 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 261
Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
A LA LDGSC++ I G A L+ G+ DG + S N DA +G +
Sbjct: 262 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAARLGAELG 321
Query: 294 QYIRFISNKNVF 305
+R S ++F
Sbjct: 322 ASLRRDSPADIF 333
>gi|302553238|ref|ZP_07305580.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
gi|302470856|gb|EFL33949.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM
40736]
Length = 330
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 17/312 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA+A + + ++ V P + ++ ++T GD + L +IGG G+F
Sbjct: 17 LRLGTRRSKLAMAQSGQVAEAVRRVTGRP---VELVEITTYGDVSREQ-LAQIGGTGVFV 72
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L+ GE+D AVHS KD+PT L ++A RED RDV ++ A DL +
Sbjct: 73 TALRDALLKGEVDFAVHSLKDLPTTQPDELVVAAVPVREDPRDVIVARDALKFTDLPSGA 132
Query: 126 VIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
IGT S RR A L + DIS + RG ++TR+ + + + A++LA AG+ R+ +
Sbjct: 133 RIGTGSPRRMAQLNAYARSHSLDISTVPIRGNVDTRIGYVRSGELDAVVLAAAGLNRIGR 192
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + L+++ P+PGQGA+ IE N + ++ T +V ER+ LA L+
Sbjct: 193 GDEVTDFLSVDTVLPAPGQGALAIECAAGNADLVAALAELDDPFTRVAVTAERSLLAALE 252
Query: 242 GSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDA 292
C + + A + +V +DG ++S G A +GR+
Sbjct: 253 AGCSAPVGALADLLADGQIVKEMRLRAVVGTTDGTRTVQLSTTGPVPQTHDRATALGREL 312
Query: 293 AQYIRFISNKNV 304
A + +
Sbjct: 313 AAEMLAQGAAGL 324
>gi|15893393|ref|NP_346742.1| porphobilinogen deaminase [Clostridium acetobutylicum ATCC 824]
gi|25453028|sp|Q97MU4|HEM3_CLOAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15022921|gb|AAK78082.1|AE007522_6 Hydroxymrthylbilane syntase (porphobilinogen deaminase)
[Clostridium acetobutylicum ATCC 824]
gi|325507505|gb|ADZ19141.1| porphobilinogen deaminase [Clostridium acetobutylicum EA 2018]
Length = 291
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 102/295 (34%), Positives = 162/295 (54%), Gaps = 6/295 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I TR S LA + L D + + + + T GD+I +++L +IGGKGLF
Sbjct: 2 KLTIATRKSKLAQVQTELIINVLKDKY---GISSEKLLMETLGDKILDKSLADIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++IE+ L+ + D AVHS KD+P ++ +I+A R D+RDVF+S KDL
Sbjct: 59 IKDIERILLEDKADAAVHSMKDVPFEVPDMFEIAAVTLRVDVRDVFVSRDGTHFKDLKNG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+VIGTSS RR A L R DI V+ RG ++TR+ K+ K I+LA AG+KRL E +
Sbjct: 119 AVIGTSSNRRAAQLKMLRDDIKVVPIRGNVQTRIRKMGEEKLDGIILAAAGLKRLNMENI 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + ++E+ P+ GQGA+ +E N K ++L + ++++++ V ER+F+ L+G C
Sbjct: 179 ITDYFSVEEMIPAVGQGALGVEIKKEN-KNRDLFRKLDNKNSRMCVEAERSFMRTLNGDC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A + G DG+ + +GN D +++G+ A+ I
Sbjct: 238 HSTIGAYAEIVNGQMNVLGF-YEIDGRRVKKD-VSGNIEDYMSLGKTLAEKILED 290
>gi|148378912|ref|YP_001253453.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502]
gi|153934281|ref|YP_001383295.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397]
gi|153936114|ref|YP_001386843.1| porphobilinogen deaminase [Clostridium botulinum A str. Hall]
gi|166201502|sp|A7FSG8|HEM3_CLOB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166201503|sp|A5I0B2|HEM3_CLOBH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148288396|emb|CAL82473.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502]
gi|152930325|gb|ABS35825.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397]
gi|152932028|gb|ABS37527.1| hydroxymethylbilane synthase [Clostridium botulinum A str. Hall]
Length = 290
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ ++LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGVILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGISLAEHILKD 290
>gi|227505107|ref|ZP_03935156.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940]
gi|227198310|gb|EEI78358.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940]
Length = 295
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+IGTR S LA + R L + ++T GD + IG G+FT
Sbjct: 2 FKIGTRGSKLATTQSGHVREWLKAN----GFESELHIVTTHGDVNM-APVERIG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + L GE D AVHS KD+PT + R+D+R+ ++ +L L +
Sbjct: 56 QALREALYGGECDIAVHSFKDLPTA-ADERFLLVVPERQDVREALVARDGLTLAQLPEGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG I+TR+ K+ + + A++LAYAG+ R + +
Sbjct: 115 RVGTSAPRRISQLKAMRPDLDIQPLRGNIDTRMGKVTSGELDAVVLAYAGLVRADYQDMA 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ + F P+P QGA+ IE + A ++ + E + ER L+ L+ C
Sbjct: 175 SEVFAPDTFMPAPAQGALAIEAV-KDSAAARAIETLIDEQASAASLGERTVLSRLEAGCT 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A + + L G V A DG S G DA +G ++ + +
Sbjct: 234 APVAATSTIENGQLTVRGGVFALDGSRQLLASATGPLSDAAQLGSAVSEELFSRGAAELL 293
>gi|161486849|ref|NP_781392.2| porphobilinogen deaminase [Clostridium tetani E88]
Length = 290
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 100/294 (34%), Positives = 148/294 (50%), Gaps = 6/294 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+ TR S LA + + + + + T GD+I +RTL +IGGKGLF
Sbjct: 2 KLIVATRRSILAQTQTDLVIKKIEEDN---EVKCEKLLIQTLGDKILDRTLDKIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK L+ G+ AVHS KD+P ++ I A RED+RD F+S +L
Sbjct: 59 IKEIEKALLDGKAHMAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGTSS RR + + R D+ V+ RG ++TRL K+ +LA AG+KRL E+V
Sbjct: 119 SKIGTSSRRRSSQIKILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEV 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I + + E+ P+ GQGA+ IE + +K I+HE+T V ER+F+ L G C
Sbjct: 179 ITDYFSPEEMVPAIGQGALGIEIKKYED-VIDYIKGIDHEETRICVEGERSFMEALKGDC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I A + +Y G + +GK + G + + +G+ A I
Sbjct: 238 HSTIGAHAIVENDLMYMTG-IFEVNGK-IVKKDIEGKKENYKQLGKTLADRIMK 289
>gi|190570895|ref|YP_001975253.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019411|ref|ZP_03335217.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357167|emb|CAQ54582.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994833|gb|EEB55475.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 292
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 113/296 (38%), Positives = 160/296 (54%), Gaps = 10/296 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LAL A E + L++ P ++ II + T GD+ N TL EIGGKGLF
Sbjct: 3 VKIGTRGSDLALIQALEAKQRLLE--SFPNLSVEIIKIKTSGDKYANVTLAEIGGKGLFL 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EIE +L+ ID AVHS KD+P K L I L R DVFISH +SLK L +
Sbjct: 61 REIEAELLKNNIDMAVHSLKDVPAFFSKDLTIPCVLERLSPCDVFISHKYKSLKTLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSS+RRK LL R D++V+ RG + TR L N ++LA AG+ RLKK +I
Sbjct: 121 TIATSSIRRKVQLLNLRPDLNVVPLRGNVTTR---LQNQNFDGMILAEAGLIRLKKYHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQG ICI+ N+ K +L++ IN+ ++ ER+F+ ++GSC
Sbjct: 178 TEVLPPKVMLSAVGQGTICIQCRKNDIKVIDLLEKINNNMSFIRAKSERSFMKTVNGSCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHE-VSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A + L+ Y ++ G+ R DA +G DA ++
Sbjct: 238 TPLAALAEYVSENMLHLYCMLA---GERVIYFTERTSFVEDAEKMGMDAGLELKSK 290
>gi|226948193|ref|YP_002803284.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto]
gi|254800244|sp|C1FVB9|HEM3_CLOBJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226840754|gb|ACO83420.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGISLAEHILKD 290
>gi|148253694|ref|YP_001238279.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1]
gi|146405867|gb|ABQ34373.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1]
Length = 325
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 135/324 (41%), Gaps = 22/324 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + FRIGTR S +ALA E L IP +I I+ T GD L GG
Sbjct: 1 MTR--FRIGTRKSTMALAQTEEIARRLQAA--IPSLDIEIVKFETTGDSDQTSKLLTHGG 56
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHT---- 114
KG F EI + ++ G + A+HS KDMP + A L D DV +
Sbjct: 57 KGGAFVAEIRRAMLDGRLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRRGLSL 116
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN---------- 164
+ KD IGT+++RR A R +I FRG +TR+ KL+N
Sbjct: 117 DEFRKDGGRGFKIGTNAVRRAAYARRLFPQAELIHFRGAADTRIRKLDNGELQRLPDGGA 176
Query: 165 --KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A +G++R+ D P+ GQG + +E + + + ++ I+
Sbjct: 177 VGPADALIMARSGLERVGLSDRASFDFAAADMLPAVGQGIVAVECPSLDWETRRILATID 236
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ ER L L+G C S IAGFA G + VL DG F E R G
Sbjct: 237 DGAARSCADAEREVLWVLNGHCNSPIAGFATIDGDQMTLTASVLDEDGGRFIEAQRAGPA 296
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+GR + +
Sbjct: 297 DRPRELGRTVGLELLANGAAELIE 320
>gi|194864825|ref|XP_001971126.1| GG14785 [Drosophila erecta]
gi|190652909|gb|EDV50152.1| GG14785 [Drosophila erecta]
Length = 650
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 149/319 (46%), Gaps = 23/319 (7%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + R+G+R S LAL L ++ P I +ST GDR+ N +L +I
Sbjct: 1 MSAQENVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRDNFKG 118
Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+ SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA
Sbjct: 119 HTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E
Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
R+FL L G C + +A ++ KG L G V + DG I +
Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298
Query: 285 AINIGRDAAQYIRFISNKN 303
G R +
Sbjct: 299 QKLEGEQ-----RKRGAQE 312
>gi|257452372|ref|ZP_05617671.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
gi|317058915|ref|ZP_07923400.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
gi|313684591|gb|EFS21426.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
Length = 299
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 163/301 (54%), Gaps = 6/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K+ +G+R S LALA + L H P + I + T+GD+ + ++
Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L
Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR
Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++++ + ER F
Sbjct: 179 VKLEEKITEYLDPTVFPPAPAQGALYIQCREEDIEVQKILQSIHNKNLEKVLVVEREFSK 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + ++ +G TL F+ + + ++ N +I R AAQ I
Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHEN--KRYQTKVVENLSKGKDIARMAAQKIEK 296
Query: 299 I 299
+
Sbjct: 297 M 297
>gi|313215076|emb|CBY42810.1| unnamed protein product [Oikopleura dioica]
Length = 368
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 102/347 (29%), Positives = 160/347 (46%), Gaps = 47/347 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
G+R S LA+ +S L + P I I + TKGD++ + L++IG K LF
Sbjct: 2 KLVAGSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------QSL 118
T+E+E L G++ VHS KDMPT L +G+ +S L RE D + +SL
Sbjct: 60 TKELEVALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------NKAHAILLA 172
L ++IG+SSLRRKA L R + + RG + TRL KL+N + A++LA
Sbjct: 120 DQLEKTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILA 179
Query: 173 YAGIKRLKKEKVIK-----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
AG++R+ ++ E L+ + + GQGA+ IET + K EL+ ++HE+T
Sbjct: 180 RAGLERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETT 239
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS--------- 277
V ER+F+ L+G C + +A + K + G V + DGK +
Sbjct: 240 LRVVAERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGKESIIKTENIDLCPAK 299
Query: 278 -------------RNGNRCD-----AINIGRDAAQYIRFISNKNVFN 306
G A+ +GR+ A+ + +
Sbjct: 300 MPKIKYPFDYVGIVRGKIDKSKMYLAMKLGRELAEQLIADGAMKILE 346
>gi|327297350|ref|XP_003233369.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892]
gi|326464675|gb|EGD90128.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892]
Length = 331
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 18/320 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K F IGTR S LA+ R +L+ + P + GD L E K
Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDALVA--RWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q
Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKTTLA 122
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+
Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER
Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242
Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + KG L IV + DGK E+ ++ N A
Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCNVHTPEQAE 302
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G+ A + +
Sbjct: 303 AFGKAVAGEMVEKGAGKILE 322
>gi|153939780|ref|YP_001390273.1| porphobilinogen deaminase [Clostridium botulinum F str. Langeland]
gi|166201504|sp|A7GBW3|HEM3_CLOBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|152935676|gb|ABS41174.1| hydroxymethylbilane synthase [Clostridium botulinum F str.
Langeland]
gi|295318368|gb|ADF98745.1| hydroxymethylbilane synthase [Clostridium botulinum F str. 230613]
Length = 290
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 104/294 (35%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPKREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ E +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLEHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 290
>gi|324993558|gb|EGC25478.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK405]
gi|324995130|gb|EGC27042.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK678]
gi|327458927|gb|EGF05275.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1057]
gi|327461831|gb|EGF08162.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1]
Length = 306
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 160/303 (52%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + ++L+ + E T V ER LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ + D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF---VSLKGQDGQQLAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|188589216|ref|YP_001922029.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska
E43]
gi|254800242|sp|B2UXC4|HEM3_CLOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188499497|gb|ACD52633.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska
E43]
Length = 290
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 6/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
I TR S LA S L I ++I+ T+GDR + +L +IGGKG
Sbjct: 1 MNELIIATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+
Sbjct: 58 LFVKDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E
Sbjct: 118 KGAKVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G
Sbjct: 178 NLITDYFDPKEFLPAVSQGALGIECLKDGD-ANKYFEALIDAEATLTVEAERSFMKELQG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S I ++ +G LY GI G + G + + I +G+ AQ I
Sbjct: 237 DCHSLIGAYSEIQGDDLYMIGIY--DIGGKIVKKDILGCKTNNIELGKKLAQKIL 289
>gi|332365713|gb|EGJ43471.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1059]
Length = 306
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 162/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISKREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + + L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA A KG ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQQLAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|313227065|emb|CBY22212.1| unnamed protein product [Oikopleura dioica]
Length = 382
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 47/347 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
G+R S LA+ +S L + P I I + TKGD++ + L++IG K LF
Sbjct: 2 KLVAGSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------QSL 118
T+E+E L G++ VHS KDMPT L +G+ +S L RE D + +SL
Sbjct: 60 TKELEIALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------NKAHAILLA 172
L ++IG+SSLRRKA L R + + RG + TRL KL+N + A++LA
Sbjct: 120 DQLEKTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILA 179
Query: 173 YAGIKRLKKEKVIK-----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
AG++R+ ++ E L+ + + GQGA+ IET + K EL+ ++HE+T
Sbjct: 180 RAGLERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETT 239
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS--------- 277
V ER+F+ L+G C + +A + K + G V + DGK +
Sbjct: 240 LRVVAERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGKESIIKTENIDLCPAK 299
Query: 278 -------------RNGNRCD-----AINIGRDAAQYIRFISNKNVFN 306
G A+ +GR+ A+++ +
Sbjct: 300 MPKIKYPFDYVGIVRGKIDKSKMYLAMKLGRELAEHLIADGAMKILE 346
>gi|195586907|ref|XP_002083209.1| GD13613 [Drosophila simulans]
gi|194195218|gb|EDX08794.1| GD13613 [Drosophila simulans]
Length = 651
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 150/319 (47%), Gaps = 23/319 (7%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I
Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118
Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+ SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA
Sbjct: 119 HTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E
Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
R+FL L G C + +A ++ KG L G V + DG I +
Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298
Query: 285 AINIGRDAAQYIRFISNKN 303
G R +
Sbjct: 299 QKLEGDQ-----RKRGAQE 312
>gi|20130425|ref|NP_612103.1| lethal (3) 02640 [Drosophila melanogaster]
gi|7292071|gb|AAF47484.1| lethal (3) 02640 [Drosophila melanogaster]
gi|77403925|gb|ABA81841.1| GH16723p [Drosophila melanogaster]
gi|211938543|gb|ACJ13168.1| FI03834p [Drosophila melanogaster]
gi|220951602|gb|ACL88344.1| l(3)02640-PA [synthetic construct]
Length = 652
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 150/319 (47%), Gaps = 23/319 (7%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I
Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118
Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+ SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA
Sbjct: 119 HTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E
Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
R+FL L G C + +A ++ KG L G V + DG I +
Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298
Query: 285 AINIGRDAAQYIRFISNKN 303
G R +
Sbjct: 299 QKLEGDQ-----RKRGAQE 312
>gi|170757497|ref|YP_001780553.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra]
gi|229836107|sp|B1IHD1|HEM3_CLOBK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169122709|gb|ACA46545.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra]
Length = 290
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 290
>gi|327473567|gb|EGF18987.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK408]
Length = 306
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+ RL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLNRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + ++L+ + E T V ER LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ + D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF---VSLKGQDGQQLAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|125717350|ref|YP_001034483.1| porphobilinogen deaminase [Streptococcus sanguinis SK36]
gi|254800260|sp|A3CL78|HEM3_STRSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|125497267|gb|ABN43933.1| Porphobilinogen deaminase, putative [Streptococcus sanguinis SK36]
Length = 306
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEI+ AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEINMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
S+IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PKGSLIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELLSLLAAVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF-VSLQG--QDGQQLAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|317507248|ref|ZP_07964994.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974]
gi|316254442|gb|EFV13766.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974]
Length = 309
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 97/303 (32%), Positives = 152/303 (50%), Gaps = 10/303 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A R ++ + ++ ++T GDR++ + EIG G+FT
Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRAL----GEQAELVIVNTIGDRVSG-PIVEIG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++ EID AVHS KD+PT + A R D RDV +S + L DL S
Sbjct: 56 SALRDALLADEIDVAVHSLKDLPTAQDPRFSLVAVPERADPRDVLVSRSGSRLADLPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L R+D+ + RG +++R+ K+ + AI++A AG+ RL +E+
Sbjct: 116 AVGTGAPRRSAQLRLARADLEIQPIRGNLDSRMRKVATAECDAIVVARAGLLRLGREQEA 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSC 244
EIL+ P+PGQGA+ +E P + E++ ++HE + + ERA LAEL C
Sbjct: 176 TEILDPAVMLPAPGQGALAVECRSEAPVSLTEVLGRLDHEHSRVTSAAERAVLAELSAGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301
+ A TL V A DG +++ N A +GR A+ +R +
Sbjct: 236 SGPVGALARIDAQTLRVEAAVCALDGSRQIREAQSAQLLNESHAAALGRRVAESLRSMGA 295
Query: 302 KNV 304
+
Sbjct: 296 MEL 298
>gi|170759533|ref|YP_001786306.1| porphobilinogen deaminase [Clostridium botulinum A3 str. Loch
Maree]
gi|238058921|sp|B1KY15|HEM3_CLOBM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169406522|gb|ACA54933.1| hydroxymethylbilane synthase [Clostridium botulinum A3 str. Loch
Maree]
Length = 290
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIVKKEITGTKDQYEKLGIALAEHILKD 290
>gi|332363288|gb|EGJ41073.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK49]
Length = 306
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAITQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISRREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PKGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + + L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|295839212|ref|ZP_06826145.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197695664|gb|EDY42597.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 314
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 161/313 (51%), Gaps = 15/313 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR SPLALA + L P +I ++P++TK D+ L ++GGKGLF
Sbjct: 1 MRIGTRSSPLALAQVEQVSGLLRKFE--PDLDIEVVPVTTKADKWQG-DLAQLGGKGLFV 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121
EI++ L G++D AVH KD+P + +GL +AYLPR+D+RDV + ++ L
Sbjct: 58 REIDQMLQRGQVDMAVHCMKDVPGDVPMPRGLIFAAYLPRDDVRDVLLVPEGSDVQSLAG 117
Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-----NNKAHAILLAYAG 175
+ + TS++RRKA + R R D++V+ RG + +R++KL+ ++ A++LA AG
Sbjct: 118 LPPGASVATSAVRRKAQINRVRPDLNVVRVRGLVGSRIDKLDGRKPMDHMLDAMVLARAG 177
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
++RL +++ + + P+ G GA+ +E ++ L++ +N E T + ER
Sbjct: 178 LERLDLMHRARQVFEVAEMLPAVGAGALGLECREDDDAVAYLLQQLNDEPTMTEITAERV 237
Query: 236 FLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDAA 293
L L G C S IAG L G+V + DG F G + D +G
Sbjct: 238 MLHGLRGHCNSPIAGHCVTDPDGQLSLRGMVFSRDGSKFVHAHFWGESMNDPAVLGSRVC 297
Query: 294 QYIRFISNKNVFN 306
+ +++
Sbjct: 298 AELLRQGARDIIE 310
>gi|294630701|ref|ZP_06709261.1| porphobilinogen deaminase [Streptomyces sp. e14]
gi|292834034|gb|EFF92383.1| porphobilinogen deaminase [Streptomyces sp. e14]
Length = 326
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 29/324 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA+A + + ++ V P + ++ ++T GD L +IGG G+F
Sbjct: 1 MRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGDTSR-EHLAQIGGTGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L GE+D AVHS KD+PT L ++A RED RDV ++ A DL +
Sbjct: 57 AALREALARGEVDFAVHSLKDLPTAQPAELVLAAIPEREDPRDVLVARDALKFADLPRGA 116
Query: 126 VIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+GT S RR A L + DI + RG ++TR+ ++ + A++LA AG+ R+ +
Sbjct: 117 RVGTGSPRRMAQLNAYARAHGLDIETVPIRGNVDTRIGFVHGGELDAVVLAAAGLNRIGR 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ + L+++ P+PGQGA+ IE + + ++ T +V ER+ LA L+
Sbjct: 177 GDEVTDFLSVDTVLPAPGQGALAIECAADRADLVAALAELDDPHTRAAVTAERSLLAALE 236
Query: 242 GSCKSAIAGFAYCKG-----------------STLYFYGIVLASDGKIFHEVSRNGNR-- 282
C + + A + G+V +DG ++S G
Sbjct: 237 AGCSAPVGALADLPPLSAPLERAEPQADRQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPR 296
Query: 283 --CDAINIGRDAAQYIRFISNKNV 304
DA+ +GR+ A + +
Sbjct: 297 THDDAMALGRELATEMLARGAAGL 320
>gi|168182770|ref|ZP_02617434.1| hydroxymethylbilane synthase [Clostridium botulinum Bf]
gi|237794217|ref|YP_002861769.1| porphobilinogen deaminase [Clostridium botulinum Ba4 str. 657]
gi|259647792|sp|C3L2Z3|HEM3_CLOB6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|182673912|gb|EDT85873.1| hydroxymethylbilane synthase [Clostridium botulinum Bf]
gi|229263906|gb|ACQ54939.1| hydroxymethylbilane synthase [Clostridium botulinum Ba4 str. 657]
Length = 290
Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 104/294 (35%), Positives = 153/294 (52%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L RSD+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRSDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 290
>gi|332016383|gb|EGI57296.1| Porphobilinogen deaminase [Acromyrmex echinatior]
Length = 358
Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 54/358 (15%)
Query: 1 MEKKP----FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56
M R+G+R S LAL L ++H P I+ ++TKGD+I +++L
Sbjct: 1 MNDDKKCDVIRVGSRKSELALIQTKHVIQCLKEIH--PKKEFEIVTMNTKGDKILDKSLP 58
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114
+IG K LFTEE+E L +G +D VHS KD+PT L G+ + A L RED RD +
Sbjct: 59 KIGEKSLFTEELELALENGSVDFVVHSLKDLPTILPVGMALGAILKREDPRDAVVMSKKF 118
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILL 171
++L L SVIGTSSLRR A LLR + + + RG + TRL KL N AI+L
Sbjct: 119 KDKTLSTLPKDSVIGTSSLRRSAQLLRNMPHLKIENIRGNLNTRLKKLNDENGPYAAIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+KR+ E I ++L +E+ + GQGA+ +E ++ K + +++ + + +
Sbjct: 179 AAAGLKRMGWEDKISQLLELEEALYAVGQGALGVECRESDWKIRSILEPLFDLEATLTCV 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR----CD--- 284
CER+FL L G C + +A + K + L G V + DG+ + D
Sbjct: 239 CERSFLKTLGGGCSAPVAVSSSLKKNELTITGAVWSLDGQTLITDTSKSKLYLPNDDGEP 298
Query: 285 ----------------------------AINIGRDAAQYIRFISN--------KNVFN 306
A +G+D A+ + + + +
Sbjct: 299 PRKCPYQEPRLYCSVIPSYKISSISLLGAEFLGKDLAKNLIKKNALDVMSQARNEILD 356
>gi|73668987|ref|YP_305002.1| porphobilinogen deaminase [Methanosarcina barkeri str. Fusaro]
gi|121731279|sp|Q46CH0|HEM3_METBF RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|72396149|gb|AAZ70422.1| hydroxymethylbilane synthase [Methanosarcina barkeri str. Fusaro]
Length = 316
Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 9/304 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-GKGLF 64
IGTR S LALA A L + + T GDR T+R L + G G F
Sbjct: 1 MIIGTRGSQLALAQAETVARLLKAK----GVETSLKIIKTSGDRFTDRPLHAVSSGVGAF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E+++ ++ G+ID AVHS KDMPT L A L R+ D+ +++ L +L+
Sbjct: 57 VRELDEVMLEGKIDIAVHSMKDMPTIRPPTLPTVAVLKRDTPFDLLLTYDGTPLDELSEQ 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S+IGTSSLRR A + R+R D+ D RG I+TRL KL K ILLA AG++R+ E
Sbjct: 117 SIIGTSSLRRAAQIKRYRPDLVTQDLRGNIDTRLRKLKEGKYDGILLAKAGLERMGWELE 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
EIL+ + F PSP QG I + T +A+ V ++H D+ + ER ++EL G C
Sbjct: 177 G-EILSPDFFCPSPNQGTIAVVTR-AETEAEAAVSRLDHTDSRIATEIERILISELGGGC 234
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
+ I +A L+ VL+ DG+ ++ I R+ + + K
Sbjct: 235 TTPIGSYAEIMPDRKKLHVRAEVLSLDGEETVGINEFIPMAGGIEKARELGSSLVHMGGK 294
Query: 303 NVFN 306
+ +
Sbjct: 295 KLAD 298
>gi|330470294|ref|YP_004408037.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032]
gi|328813265|gb|AEB47437.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032]
Length = 336
Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 104/326 (31%), Positives = 166/326 (50%), Gaps = 28/326 (8%)
Query: 1 MEKK----PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56
M ++ P R+GTR S LA+A + +L P + ++ + T GDR ++ +
Sbjct: 1 MSQRQPSGPLRLGTRGSKLAMAQSGHVAEALTARTGRP---VELVEVITAGDR-SSAPVH 56
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
+G G+F + L++ EID AVHS KD+PT + GL I+A PRED RD ++ +
Sbjct: 57 RLG-VGVFVSALRDALVAREIDFAVHSYKDLPTAMPAGLHIAAVPPREDPRDALVARDGR 115
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174
+L +LA + IGT +LRR A L +SV RG I+TRL ++ + AI+LA A
Sbjct: 116 TLAELAPGASIGTGALRRIAQLHALGMQLSVSPIRGNIDTRLARVLGPDADLDAIVLARA 175
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+ R+ + VI E L+ P+P QGA+ +E V++P+ EL+ ++H + +V ER
Sbjct: 176 GLARIGRLDVITETLDPMLMLPAPAQGALAVECRVDDPEMVELLGTLDHAASRATVTAER 235
Query: 235 AFLAELDGSCKS------------AIAGFAYCKGS---TLYFYGIVLASDGKIFHEVSRN 279
A LA L+ C + + +G +Y G V++ DG +SR
Sbjct: 236 AMLATLEAGCSAPVAAYAVVAEGEPTG--SGVEGDVVQEIYLRGAVISPDGSRDIRLSRT 293
Query: 280 GNRCDAINIGRDAAQYIRFISNKNVF 305
G DA IG+ A + + ++
Sbjct: 294 GTLADAAEIGKALATELLDLGADSIL 319
>gi|256820282|ref|YP_003141561.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271]
gi|256581865|gb|ACU93000.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271]
Length = 288
Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 10/296 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIGTR S LAL A ++ L + + I+ + GD ++ L E+G G
Sbjct: 1 MNTIRIGTRDSELALWQAKTVQNQLKTL----GYPTEIVSTKSHGDIELSKPLYEMGVTG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L++GEID AVHS KD+PT L +G+ + A L R + DV + S +
Sbjct: 57 IFTKALDIALLNGEIDIAVHSMKDVPTALPEGIAVGAVLKRGNPHDVLVYKGDLSFLEAE 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ + I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K
Sbjct: 117 I-ATIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERINKL 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L ++ P+P QGAI + +N Q+ + ++ + T+ + ER FL L+G
Sbjct: 176 PEKH--LVLDWMLPAPAQGAIVVVVREDNVALQKKLLPLHDDYTYIATQLERDFLRALEG 233
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCDAINIGRDAAQYIR 297
C + I FA K LYF G + + DGK + G A I+
Sbjct: 234 GCTAPIGAFAEFKDDKLYFKGGLWSEDGKEASVIDEVLTQIDEYT--GEKLATMIK 287
>gi|258651772|ref|YP_003200928.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233]
gi|258554997|gb|ACV77939.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233]
Length = 305
Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 5/306 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+GTR S LALA + V ++ + ++ + T+GD T L IGG
Sbjct: 1 MSSRVLRVGTRGSALALAQSGMIADR---VARLAGATVELVRIRTEGDVNTG-PLATIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ G D VHS KD+PT +G+ ++A RE D + L D
Sbjct: 57 TGVFVTGVREALLDGRADIVVHSYKDLPTAPTEGITVAAVPERESPFDALCARDGLRLDD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GT S RR A LL R D++V+ RG ++TRL +++ A++LA AG+ RL
Sbjct: 117 LPRGSTVGTGSPRRAAQLLARRPDLAVVPIRGNVDTRLRQVSEGHLDAVVLAAAGLNRLG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L+ + P+P QGA+ +E E + ++ T +V ER L +
Sbjct: 177 RADAITDVLDADRMLPAPAQGALAVECRSGADTWFTEATRTLDDAPTRAAVVAERVLLRD 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+ C + + FA +G L +V+A DG V R G+ A ++G AA +
Sbjct: 237 LEAGCSAPVGAFAQVQGDALTLRAVVVAVDGSSEFRVHRAGSPAAAADLGARAAADLIGQ 296
Query: 300 SNKNVF 305
+
Sbjct: 297 GAAGLL 302
>gi|57239097|ref|YP_180233.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|58579044|ref|YP_197256.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|57161176|emb|CAH58090.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|58417670|emb|CAI26874.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
Length = 299
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 112/300 (37%), Positives = 166/300 (55%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR S LA+A A E + L + P N+ I+ + T GD +L+EIGG
Sbjct: 1 MNSMNVYVGTRGSILAIAQAMEVKKLL--YNYFPDINVQIVHIVTSGDINDKISLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+
Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+
Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ +
Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+GSC + +A A Y TLY ++ + N CDA G + +
Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNE--EKTVFSDCYFNECDAEISGINMGNDLMDQ 296
>gi|237740509|ref|ZP_04570990.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31]
gi|229422526|gb|EEO37573.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31]
Length = 301
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
K+ IG+R S LALA A ++SL + P I + T GD+ +
Sbjct: 1 MKRHVVIGSRGSILALAQASLVKNSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNAS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L
Sbjct: 59 LKSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E L+ E FPP+P QG + I+ N+ + + ++K I++ED V ER F
Sbjct: 178 GMADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNEDIAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ + F + DGK V + I AA+ I+
Sbjct: 238 FDGGCHTPMGCYSQVDEDKIKFIAA-YSHDGKQ-IRVVIEDDLTKGKEIAHMAAEEIKAK 295
Query: 300 SNKN 303
NK
Sbjct: 296 INKG 299
>gi|300856363|ref|YP_003781347.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528]
gi|300436478|gb|ADK16245.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528]
Length = 290
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 101/293 (34%), Positives = 150/293 (51%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F+I TR S LA L + + + T GD+ + L +IGGKGLF
Sbjct: 3 FKIATRKSKLAQTQTEIVMDILQKDYNA---KCEKVLIETMGDKRLDIALNKIGGKGLFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L+ E D AVHS KD+P + + +I+A + RED+RD F+S +L +
Sbjct: 60 KEIELALLKDEADAAVHSMKDVPFDVPEDFEIAAIMQREDVRDAFVSKDKVPFDELPKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR L R DI + RG I+TR++K+ + I+LA AGIKR E+++
Sbjct: 120 KIGTSSNRRAEQLKILRPDIEIAPIRGNIQTRISKIESQNLDGIVLAAAGIKRSHLEELV 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E +ED P+ GQGA+ IET + K + ++ E+T V ER+F+ L+G C
Sbjct: 180 TEYFKVEDMVPAIGQGALGIETK-KDSKNKSFFSKLDDENTRICVEAERSFMRTLNGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I +A T+ G+ + G + GN+ D + +G A+ I
Sbjct: 239 STIGAYAKIDKDTINIMGMFMV--GNKLIKKDVTGNKEDYMVLGEKLAKMILK 289
>gi|325954067|ref|YP_004237727.1| porphobilinogen deaminase [Weeksella virosa DSM 16922]
gi|323436685|gb|ADX67149.1| porphobilinogen deaminase [Weeksella virosa DSM 16922]
Length = 306
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 91/309 (29%), Positives = 140/309 (45%), Gaps = 16/309 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR SPLAL A + + L I IIP+ ++GD + + +G G
Sbjct: 1 MKKIRIGTRQSPLALWQANKVAALLSKK----GCEIEIIPIKSEGDLNLKQPIYSLGITG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L++ +ID AVHS KD+PT L +GL + A+ R + D+ + +
Sbjct: 57 VFTKSLDIALLNNKIDIAVHSLKDVPTVLPEGLALKAFPERANSSDILVYKSNDIF--TK 114
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181
H I T SLRR+A L + +++D RG ++ RL KL +N + A AG+ R +
Sbjct: 115 THRTIATGSLRRRAFWLHRYPEDTLVDLRGNVQLRLQKLQDNDWDGAIFAMAGLDRSEII 174
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
E I+ +P QG + + + IN+E+ ER FL
Sbjct: 175 ADLENRKLHYSTIDWMLAAPSQGILGVVAREDFDFPS-----INNEECELYATVERQFLN 229
Query: 239 ELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
L+G C + I F G +L+ DGK EV NR + GR A+
Sbjct: 230 VLEGGCTAPIGALVSPLSADMYRFQGTILSLDGKEKIEVVDQFNRSEYKEFGRKMAEKCL 289
Query: 298 FISNKNVFN 306
K + +
Sbjct: 290 EQGAKQLID 298
>gi|169631071|ref|YP_001704720.1| porphobilinogen deaminase [Mycobacterium abscessus ATCC 19977]
gi|238054424|sp|B1MHI5|HEM3_MYCA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169243038|emb|CAM64066.1| Porphobilinogen deaminase (HemC) [Mycobacterium abscessus]
Length = 306
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 92/309 (29%), Positives = 138/309 (44%), Gaps = 15/309 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L H ++ ++T GD + E G G+FT
Sbjct: 2 IRIGTRGSLLATTQAGGIRDALRAK----GHEAELVIVTTAGD--QSAAPVEQIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + +D AVHS KD+PT I A PRED RD ++ L +L S
Sbjct: 56 AALREAIADDVVDVAVHSYKDLPTAADPRFVIPAIPPREDYRDALVARDGLVLGELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS RR A L + + RG ++TRL++++N +++A AG+ R+ + I
Sbjct: 116 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLSRVSNGDLDGVVVARAGLARIGRLDHI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L P+P QGA+ +E ++ ++H DT +V ERA LAEL+ C
Sbjct: 176 TETLEPVQVLPAPAQGALAVECRSEATDLVAVLAELDHADTRAAVTAERALLAELEAGCT 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G A DG S G A +G A+ +
Sbjct: 236 APVGAIAEVVESIDEEGRVFDELSLRGCAAALDGSDVIRASGIGTPDRAAELGLAVAREL 295
Query: 297 RFISNKNVF 305
+ + +
Sbjct: 296 LDLGARALI 304
>gi|296394051|ref|YP_003658935.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985]
gi|296181198|gb|ADG98104.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985]
Length = 308
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 154/310 (49%), Gaps = 16/310 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA A R ++ + + ++ ++T GD+ ++ +TEIG G+FT
Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRSL----GESAELVIVATVGDK-SSGPITEIG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ LI+GEID AVHS KD+PT + A R D DV +S + L +L S
Sbjct: 56 SALRDALIAGEIDIAVHSLKDLPTAQDPRFSLVAVPERADPSDVLVSRSGLPLAELPPGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT + RR A L R+D+ + RG ++TR+ K+ + AI++A AG+ RL +E+
Sbjct: 116 TVGTGAPRRAAQLRLARADLEIQPIRGNLDTRMRKVATAECDAIVVARAGLLRLGREQEA 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSC 244
E+L+ P+PGQGA+ +E + P + E + ++HE + + ERA LAEL C
Sbjct: 176 TEVLHPAVMLPAPGQGALAVECRSDAPASLTETLAKLDHEHSRAASAAERAVLAELSAGC 235
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---------CDAINIGRDAAQY 295
+ A G TL V+A DG + A+ +GR A+
Sbjct: 236 SGPVGALARMTGQTLRVEASVIAIDGSRSVRAHAETSVLGTELLSQEQHAVALGRRVAES 295
Query: 296 IRFISNKNVF 305
+R + +
Sbjct: 296 LRSMGAMELI 305
>gi|294785256|ref|ZP_06750544.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27]
gi|294486970|gb|EFG34332.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27]
Length = 302
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 146/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P I + T GD+ ++I
Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDIS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E L+ E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 178 GMTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F + L GK + + I A + I+
Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLTKGKEIAYMATEEIKNK 295
Query: 300 SNKN 303
NK
Sbjct: 296 INKG 299
>gi|255324252|ref|ZP_05365374.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum
SK141]
gi|311740973|ref|ZP_07714798.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298768|gb|EET78063.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum
SK141]
gi|311303775|gb|EFQ79853.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 295
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 90/298 (30%), Positives = 140/298 (46%), Gaps = 8/298 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LA A R L+D + + ++T GD + IG G+FT+
Sbjct: 4 IGTRGSKLATTQAGHVRDWLIDA----GFDSQLHIVTTAGDVNM-APVERIG-VGVFTQA 57
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
+ + L +GE D AVHS KD+PT + ++ R+D R+ ++ SL L + +
Sbjct: 58 LREALYAGECDIAVHSFKDLPTAPDERFRL-VVPQRQDSREALVARDGLSLAQLPQGARV 116
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTS+ RR + L R D+ + RG I+TR++K+ + + A+LLAYAG+ R E
Sbjct: 117 GTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVLLAYAGLLRGGYADRATE 176
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
I F P+P QGA+ IE A L I + + ERA LA L+ C +
Sbjct: 177 IFEPSVFMPAPAQGALAIEAVAGTEAAAALDA-IVDDRASAAAAGERAVLARLEAGCTAP 235
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+A + G L G V A DG + +G+ +A ++G + + +
Sbjct: 236 VAATSRWDGDQLTVRGGVFALDGSRQLTATASGSAAEAADLGARISDELFAGGAAELL 293
>gi|237742175|ref|ZP_04572656.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13]
gi|229429823|gb|EEO40035.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13]
Length = 302
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 146/304 (48%), Gaps = 7/304 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59
KK IG+R S LALA A + L P I + T GD+ ++I
Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDIS 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L
Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR
Sbjct: 118 TLPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRT 177
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F
Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKI 237
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
DG C + + ++ G + F + L GK + + I A + I+
Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAHMATEEIKNK 295
Query: 300 SNKN 303
NK
Sbjct: 296 INKG 299
>gi|251778553|ref|ZP_04821473.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082868|gb|EES48758.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 290
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 6/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
I TR S LA S L I ++I+ T+GDR + +L +IGGKG
Sbjct: 1 MNELIIATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+
Sbjct: 58 LFVKDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL +
Sbjct: 118 KGAKVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDK 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G
Sbjct: 178 NLITDYFDPKEFLPAVSQGALGIECLKDGD-ANKYFEALIDAEATLTVEAERSFMKELQG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S I ++ KG LY GI G + G + + I +G+ AQ I
Sbjct: 237 DCHSLIGAYSEIKGDDLYMIGIY--DIGGKIVKKDILGCKTNNIELGKKLAQKIL 289
>gi|328945742|gb|EGG39893.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1087]
Length = 306
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 163/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + +I+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDSIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + ++L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDKELRQLLATVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA A KG ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|261749160|ref|YP_003256845.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497252|gb|ACX83702.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 310
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 146/308 (47%), Gaps = 9/308 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR SPLA++ A E + L + + ++GD I N L +
Sbjct: 1 MNKIIRIGTRNSPLAISQAIEVQKVLHRLGYCSHLFF----IKSEGDLIQNIPLYKFKKV 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-D 120
G+FT + L+SG+ID AVHS KD+PT L + + +SAYL R D+ I + + +
Sbjct: 57 GIFTRNLTDVLLSGKIDMAVHSLKDVPTSLPEKIVLSAYLKRGSFSDLLIYQGSSNFLLN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +VI T SLRR+A +++D RG I TRL KL NN + A G++RL
Sbjct: 117 SKIEAVIATGSLRRRAFWKNRYPHHTIVDLRGNINTRLKKLYNNSWKGAIFAKVGLERLG 176
Query: 181 --KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ ++ PSPGQG I + T +N L K ++ +T S N ER FL
Sbjct: 177 LLNDLEGFNFKVLDWMIPSPGQGIIVVSTRKDNEWIHYLTKELDDRNTRLSANIERQFLK 236
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C + I A K +YF GI+ + DG + G + IG A+ I
Sbjct: 237 TLGGGCVTPIGAHAIIKNKIIYFTGILFSLDGMQKIRKKKIGT--NYNVIGYQCAKEILE 294
Query: 299 ISNKNVFN 306
K +
Sbjct: 295 EGGKKILE 302
>gi|187778036|ref|ZP_02994509.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC
15579]
gi|187774964|gb|EDU38766.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC
15579]
Length = 295
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 104/294 (35%), Positives = 153/294 (52%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA SL H + + T GD+I +L +IGGKGLF
Sbjct: 8 FVIATRRSKLAQVQTEIIIDSLNKKH---DIECEKLLIETIGDKILEVSLDKIGGKGLFV 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 65 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 125 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C
Sbjct: 185 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 243
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A K + ++ GI + + G + +G A++I
Sbjct: 244 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 295
>gi|187933878|ref|YP_001887094.1| porphobilinogen deaminase [Clostridium botulinum B str. Eklund 17B]
gi|254800243|sp|B2TPD7|HEM3_CLOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|187722031|gb|ACD23252.1| hydroxymethylbilane synthase [Clostridium botulinum B str. Eklund
17B]
Length = 290
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 104/295 (35%), Positives = 156/295 (52%), Gaps = 6/295 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
I TR S LA L I ++I+ T+GDR + +L +IGGKG
Sbjct: 1 MNELIIATRKSKLAQVQTEIIMGKLKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+
Sbjct: 58 LFVKDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E
Sbjct: 118 KGAKVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDE 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+I + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G
Sbjct: 178 NLITDYFDPKEFLPAVSQGALGIECLKDGD-ANKYFEALIDAEATLTVEAERSFMKELQG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C S I ++ +G LY GI G + G + + I +G+ AQ I
Sbjct: 237 DCHSLIGAYSEIQGDDLYMIGIY--DIGGKIVKKDILGCKTNNIELGKKLAQKIL 289
>gi|332360583|gb|EGJ38393.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1056]
Length = 306
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 162/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + + L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCVF-VSLQG--QDGQQLAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|32474491|ref|NP_867485.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1]
gi|39931387|sp|Q7UPN0|HEM3_RHOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|32445029|emb|CAD75031.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1]
Length = 337
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 149/324 (45%), Gaps = 29/324 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR SPLA+ A L I+PL +KGD R + GLFT
Sbjct: 12 LRIATRESPLAMWQAEHVAKLLKKH----GFQTEIVPLVSKGDTDM-RPIDGTRQVGLFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---- 121
+ I++ L+ E D AVHS KD+PT+ ++A PRE + D + +
Sbjct: 67 KRIQQALVDDEADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLESQTGA 126
Query: 122 -------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+ +GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+A
Sbjct: 127 ESPLDYLPQGARVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHA 186
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
GI RL+ + + +++ P+PGQGA+ IE ++ A + + +N + ER
Sbjct: 187 GILRLEMTDLPHRLFPLDEMIPAPGQGALGIEVRSDDAGAMDAIANLNDAAARLAATAER 246
Query: 235 AFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNG---------N 281
L+EL G C + IA A + G+ L IV+++DG+ + +
Sbjct: 247 KVLSELHGGCLAPIACHAKLETSNHGTELCLRAIVMSADGEQRLQEDARITVQPNDADLH 306
Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305
+A +G A+ +R +
Sbjct: 307 VAEAHELGTLVAKRLRDKGADKLI 330
>gi|325696921|gb|EGD38808.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK160]
Length = 306
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQKLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + ++L+ + + T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDDKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA KG ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKKGQAYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|271962120|ref|YP_003336316.1| hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021]
gi|270505295|gb|ACZ83573.1| Hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021]
Length = 306
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 97/301 (32%), Positives = 154/301 (51%), Gaps = 6/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S +A + + L ++ + ++ ++T GD +T LT++GG G+F
Sbjct: 7 PLRLGTRRSLMATTQSGLVAARLTELT---GRAVELVGVTTFGD-VTKANLTQLGGTGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ KLI GEID AVHS KD+PT + I+A PR+D RD + + L DL
Sbjct: 63 VSALRDKLIDGEIDFAVHSLKDLPTTQDPRVVIAAIPPRDDPRDALV--STAKLADLPAG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S +GT S RR A L R D+ + RG +TR+ K+ + + ++LA AG+ RL +E
Sbjct: 121 SKVGTGSPRRIAQLRVLRPDLEYVPIRGNADTRIGKVTSGELQGVVLAAAGLGRLGREAE 180
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I ++ +E+ P+PGQGA+ +E + E + V++ T +V ERA L L+ C
Sbjct: 181 ISQVFEVEEMLPAPGQGALAVECRADRTDLIEFLSVLDDARTRAAVTAERAVLNALEAGC 240
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + ++ G L V+A DGK S G +++GRD A + +
Sbjct: 241 AAPVGAYSADDGQNLILTAAVVAVDGKRAVRKSTAGTLSAPMDLGRDLAAEMIAEGAGTL 300
Query: 305 F 305
Sbjct: 301 I 301
>gi|90422760|ref|YP_531130.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB18]
gi|90104774|gb|ABD86811.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB18]
Length = 326
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 150/320 (46%), Gaps = 20/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63
P RIGTR S +ALA + L ++ I+ T GD L GGKG
Sbjct: 4 PVRIGTRKSIMALAQTEDIARRLSAAAS--ELDVEIVKFETVGDSDQVSKLLPHGGKGGA 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120
F EI + +G+++ +HS KDMP + GL I A L R+ D + +L+D
Sbjct: 62 FVAEIRAAVTAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPPTDALVLRKGLTLEDLR 121
Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166
IGT+++RR A R +++VI FRG +TR+ KL+N A
Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRVRKLDNAEKQRLPDGGHVGPA 181
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A+++A +G++R+ I ++ PS GQG + +E VNN + ++ +++I+
Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVNNWQIRKYLELIDDPVA 241
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
S + ER L L+G C S +A F+ KGS + VL +G +F E SR+G
Sbjct: 242 RLSCDAEREVLWVLNGHCNSPMAAFSTIKGSEMTLSASVLDEEGGLFIEASRSGPANRPR 301
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GR A + +
Sbjct: 302 ELGRAVALELLDKGAAAIIE 321
>gi|157125875|ref|XP_001654431.1| porphobilinogen deaminase [Aedes aegypti]
gi|108873496|gb|EAT37721.1| porphobilinogen deaminase [Aedes aegypti]
Length = 534
Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 149/293 (50%), Gaps = 13/293 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++ R+G+R S LAL + L ++ P I ++T GDR+ N++L +IG K
Sbjct: 6 KEHVIRVGSRKSELALIQTKHVIACLQKLN--PDVQYEIHTMTTVGDRVLNKSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + + ++L
Sbjct: 64 SLFTKDLEDALRNGGVDFVVHSLKDLPTSLPIGMAIGAVLEREDPRDALVLNEKFRGKTL 123
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
L SVIGTSSLRR A L R + V D RG + TRL KL+ K I+LA AG+
Sbjct: 124 STLPKGSVIGTSSLRRSAQLARLHPHLVVCDIRGNLNTRLAKLDAEGSKFAGIVLAQAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+F
Sbjct: 184 VRMGWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSF 243
Query: 237 LAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
L L G C + +A K + L G V + DGK +
Sbjct: 244 LKTLGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGKTEIRADDGCSVE 296
>gi|323353345|ref|ZP_08087878.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66]
gi|322121291|gb|EFX93054.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66]
Length = 306
Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 162/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + + L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQTLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA FA G ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|146338934|ref|YP_001203982.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278]
gi|146191740|emb|CAL75745.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278]
Length = 325
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 22/324 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + FRIGTR S +ALA E L IP +I I+ T GD L GG
Sbjct: 1 MTR--FRIGTRKSTMALAQTEEIARRLQAA--IPSLDIEIVKFETTGDSDQTSKLLTHGG 56
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHT---- 114
KG F EI + ++ G++ A+HS KDMP + A L D DV +
Sbjct: 57 KGGAFVAEIRRAMLDGKLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRKGLAL 116
Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN---------- 164
KD IGT+++RR A R +I FRG +TR+ KL+N
Sbjct: 117 EDFRKDGGRGFKIGTNAVRRAAYARRLFPHAELIHFRGAADTRIRKLDNGELQRMPDGGA 176
Query: 165 --KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A +G++R+ + D P+ GQG + +E ++ + + ++ ++
Sbjct: 177 VGPADALIMARSGLERVGLSDRASHEFPVADMLPAVGQGIVAVECPASDFETRRILATVD 236
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ ER L L+G C S IAGF+ G+ + VL DG F E R G
Sbjct: 237 DAAARTCADAEREVLWVLNGHCNSPIAGFSTIDGAQMTLTASVLDEDGGRFIEAQRTGPA 296
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+GR + +
Sbjct: 297 DRPRELGRAVGLELLASGAAALIE 320
>gi|50291395|ref|XP_448130.1| hypothetical protein [Candida glabrata CBS 138]
gi|55976396|sp|Q6FNR4|HEM3_CANGA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49527441|emb|CAG61081.1| unnamed protein product [Candida glabrata]
Length = 329
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 145/321 (45%), Gaps = 17/321 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ IG R S LA+ + R + K P ++ + L T GD+I + L GG
Sbjct: 1 MTRESINIGGRRSKLAVVQSNHVRDLVQA--KFPQYDCTVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
K L+T+E+E L +D VHS KDMPT L G ++ R D D +
Sbjct: 59 KALWTKELEDYLYCEDQEKRLDLIVHSLKDMPTLLPDGFELGCVTKRVDPTDCIVMPRGS 118
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
+ L DL +V+GTSS+RR A L R + RG I TRL KL++ ++L
Sbjct: 119 PHRCLADLPEGAVVGTSSVRRSAQLKRKFPHLKYQSVRGNIHTRLEKLDDPEGPFQCLVL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + L+ + + GQGA+ IE + K +++ I ++
Sbjct: 179 ASAGLVRMGLEDRITQRLHSDIMYHAVGQGALGIEIRQGDKKILQILDEIADLESTVCCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN----GNRCDA 285
ER+ + L+G C I + T L GIV+ +G + E + R D+
Sbjct: 239 AERSLMRTLEGGCSVPIGVESSYDHKTKKLLLKGIVVNVEGTMAIEDQQEVVVNDIREDS 298
Query: 286 INIGRDAAQYIRFISNKNVFN 306
I G A + K + +
Sbjct: 299 IKCGVLLAHKMIKDGAKKILD 319
>gi|134055399|emb|CAK43953.1| unnamed protein product [Aspergillus niger]
Length = 346
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 99/334 (29%), Positives = 143/334 (42%), Gaps = 30/334 (8%)
Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54
M + R+GTR S LAL A L H P + +GD +
Sbjct: 1 MSQNTTTTVQELRLGTRNSKLALVQAEHVSKELTSAH--PGVQFPWQTVVVRGDADKSSP 58
Query: 55 LTEIGG-----KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+ G K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D
Sbjct: 59 FLKFAGPSDAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDA 118
Query: 110 FISH-----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN- 163
+ L L SV+GTSS RRKALL + V + RG + TRL KL++
Sbjct: 119 LVIKEGLRSQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDP 178
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I
Sbjct: 179 EGPFSAIILATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIE 238
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHE 275
T ER+ L L G C S +A + + L G ++ G
Sbjct: 239 DLVTRRICLAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDGTIIHPHGTTLLS 298
Query: 276 VSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306
G DA +G AQ + + +
Sbjct: 299 ERTTAEVGTDEDAEALGATVAQQLLKNGGQALLE 332
>gi|88802327|ref|ZP_01117854.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P]
gi|88781185|gb|EAR12363.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P]
Length = 531
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 97/305 (31%), Positives = 146/305 (47%), Gaps = 10/305 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K RIGTR S LAL A + R L + + V++P+ + GD + L E+G
Sbjct: 1 MQKIIRIGTRDSQLALWQANKVRKELAGL----GYESVLVPIKSSGDINLDTPLYEMGIT 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+ ++ L+ G+ID AVHS KD+PT L KG+ +A L R + DV + + +
Sbjct: 57 GIFTKSLDIALLEGKIDIAVHSLKDVPTALPKGIVQAAVLKRGNYNDVLVLNGTEEFFGE 116
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLK 180
I T SLRRKA+ L V RG ++TRL KL +K + + A AG++RL
Sbjct: 117 EQGL-IATGSLRRKAMWLDRYPTHKVAPLRGNVQTRLEKLETSKTWNGAVFAAAGLERLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+++ P+P QGAI I + + + INH +T V ER FL L
Sbjct: 176 ITPED--TVDLPWMLPAPAQGAIMIAALEKDDFTLDACEQINHHETSVCVGVEREFLRLL 233
Query: 241 DGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+G C + I AY + F ++L DG V++ + +D A Y+
Sbjct: 234 EGGCTAPIGALAYVDARTDEVNFKAVLLKKDGSKKIRVAKTAKFGSHKFLAKDCADYVIN 293
Query: 299 ISNKN 303
K
Sbjct: 294 RGGKE 298
>gi|227832129|ref|YP_002833836.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
gi|262184020|ref|ZP_06043441.1| porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
gi|254800247|sp|C3PKG2|HEM3_CORA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|227453145|gb|ACP31898.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975]
Length = 296
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA + + L + + ++T+GD + IG G+FT
Sbjct: 2 LKIGTRGSLLATTQSGHVQEWLQQK----GYEAELHIVTTQGDVNM-APVERIG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + + + GE + AVHS KD+PT + + R+D+R+ I+ +LK+L +
Sbjct: 56 QALREAVDRGECEIAVHSFKDLPTAADERFDL-VVPQRQDVREALIARDGLTLKELPEGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG I+TR+ K+ + + A+LLAYAG+ R +
Sbjct: 115 RVGTSAPRRISQLRAMRPDLDIRPLRGNIDTRMGKVTSGELDAVLLAYAGLVRAGYAERA 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ + E F P+P QGA+ IE +A + + ++ + ER L++L+ C
Sbjct: 175 TEVFDPEVFMPAPAQGALAIEAV-KGTEAAKAIALLADGPATAATRAERTVLSQLEAGCT 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +A ++ +G L G V A DG G +A +GR ++ + +V
Sbjct: 234 APVAATSHWEGEQLVVRGGVFALDGSRQLIAQAQGAASEAEELGRAVSKELFAQGAADVL 293
>gi|304320177|ref|YP_003853820.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503]
gi|303299080|gb|ADM08679.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503]
Length = 324
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 111/283 (39%), Positives = 154/283 (54%), Gaps = 4/283 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLT 56
M KP RI +R SPLA+A A R L + I + T GDR+ N TL
Sbjct: 1 MSFKPLRIASRRSPLAVAQALWVRDRLAEALGIDEVDRDAAFPHETFVTTGDRMLNPTLA 60
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116
+IGGKGLFT+EIE L+ G+ D AVHS KDMP ++ GL ++A RED RD F++ +
Sbjct: 61 DIGGKGLFTKEIEIALLDGQADIAVHSMKDMPAQMPPGLVLAAVPVREDPRDAFVTLDGR 120
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + + IGTSS RR+A L R R D++++ RG + TRL KL +A LA AG+
Sbjct: 121 PLDQMPAGARIGTSSTRRRAQLARLRPDLALVPMRGNVGTRLQKLAAGEAEGTFLAEAGL 180
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+RL V +E L+ P+ GQGA+C++ + + IN+ T + ERA
Sbjct: 181 RRLGMTDVKREALSPARMLPALGQGALCVQARSGDHETLSACAHINNRPTALAAAAERAL 240
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
++ LDGSCK+ I G A G +L G +L DG+ R
Sbjct: 241 ISGLDGSCKTPIGGLARQTGDSLILEGQILTPDGRRVLRGERT 283
>gi|213964237|ref|ZP_03392470.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno]
gi|213953127|gb|EEB64476.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno]
Length = 293
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 98/298 (32%), Positives = 154/298 (51%), Gaps = 9/298 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIGTR S LAL A + L + ++ I+ + GD ++ L E+G G
Sbjct: 1 MKTIRIGTRDSELALWQAKTVQHQLEAL----GYSTEIVSTKSHGDIELSKPLYEMGVIG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L++GEID AVHS KD+PT L G+ + A L R + DV + S D+
Sbjct: 57 IFTKALDIALLNGEIDIAVHSMKDVPTALPDGIVVGAVLKRGNPHDVLVYKGDLSFLDVE 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ + I TSSLRRKA L ++ + RG + TRL KL +N + + A AG++R+ K
Sbjct: 117 I-ATIATSSLRRKAQWLHRYPHHNIENLRGNVNTRLQKLADNPWNGAIFAAAGLERINKL 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L ++ P+P QGAI + H +N Q ++ I+ +T+ + ERAFL L+G
Sbjct: 176 PEN--HLRLDWMFPAPAQGAIMVTLHEDNVPLQGVLLRIHDGNTYVATQVERAFLRALEG 233
Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + I FA G +YF G + + DGK + + + + G A+ ++
Sbjct: 234 GCTAPIGAFAQYDGQQKVYFKGGLWSEDGKKAAVIEEILTQIN-EHTGEQLAEKVKSK 290
>gi|229586831|ref|YP_002845332.1| porphobilinogen deaminase [Rickettsia africae ESF-5]
gi|259646263|sp|C3PNS9|HEM3_RICAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|228021881|gb|ACP53589.1| Porphobilinogen deaminase [Rickettsia africae ESF-5]
Length = 351
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG
Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFAYCKG 256
LD +C++ IA ++
Sbjct: 238 LDANCRTPIAAYSQYLD 254
>gi|119713318|gb|ABL97382.1| porphobilinogen deaminase [uncultured marine bacterium EB80_02D08]
Length = 300
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 97/301 (32%), Positives = 143/301 (47%), Gaps = 4/301 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR S LA+ A + + I + +IP++++GD+ TN+ L EIGGKGLF
Sbjct: 2 KIKIATRQSELAMYQANFVANEIKK--SIKDVEVELIPMTSEGDQ-TNKPLHEIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E L S ++D AVHS KD+P +L +I RE D+ +S +S D +
Sbjct: 59 ISTLESALESNKVDIAVHSLKDVPARLDPKFKIINVFKRESPSDLLLSKDGKSFSDFLEN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTS RRKA + R DI I RG I TR+NKLN +++A A I RL ++
Sbjct: 119 ATIGTSGPRRKAQINYLRPDIKTIPVRGNIATRINKLNEGYFDGLVVAKAAINRLGLQQN 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E +I++ P+ QG I E +N + E ++ I N ER+F+A +DG C
Sbjct: 179 SYE-FSIDEMLPAASQGHIATECLSSNKEIIETLESIGDSKELILANAERSFVASMDGGC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
S IA + G VL+ G N + D A K++
Sbjct: 238 LSPIAILCQNFNDEIKVIGKVLSYKGDKLIYKKMNSSFKDIDKDIISFADEFILEGAKSL 297
Query: 305 F 305
Sbjct: 298 I 298
>gi|58617102|ref|YP_196301.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel]
gi|58416714|emb|CAI27827.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel]
Length = 299
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 111/300 (37%), Positives = 166/300 (55%), Gaps = 5/300 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +GTR S LA+A A + + L + P N+ I+ + T GD +L+EIGG
Sbjct: 1 MNSMNVYLGTRGSILAIAQAMKVKKLL--YNYFPDINVQIVHIVTSGDINDKISLSEIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+
Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+
Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ +
Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+GSC + +A A Y TLY ++ + N CDA G + +
Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNE--EKTVFSDCYFNECDAEISGINMGNDLMDQ 296
>gi|198462481|ref|XP_001352446.2| GA21587 [Drosophila pseudoobscura pseudoobscura]
gi|198150842|gb|EAL29942.2| GA21587 [Drosophila pseudoobscura pseudoobscura]
Length = 630
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 98/300 (32%), Positives = 147/300 (49%), Gaps = 18/300 (6%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I
Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQRFEIHTMSTFGDRVLNVSLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQG 118
Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+ SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA
Sbjct: 119 HTIASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E
Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
R+FL L G C + +A ++ +G L G V + DG I + +
Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAIEIRNHLSCALSE 298
>gi|134103372|ref|YP_001109033.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
gi|291004409|ref|ZP_06562382.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
gi|133915995|emb|CAM06108.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338]
Length = 315
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 19/310 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S LA+A +L + ++ +ST GDR + EIG
Sbjct: 1 MNKTLRIGTRGSALAMAQTSWVAEALEKA----GYRTELVTVSTPGDRSM-APIAEIG-V 54
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L
Sbjct: 55 GVFTSALRDALADGEVDVAVHSYKDLPTAPDPRLSLAAVPVREDPRDALVARDGLTLGEL 114
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GT S RR L + V D RG ++TR+ K+ + + A++LA AG+ R+ +
Sbjct: 115 PPGSVVGTGSPRRAGQLKALGLGLEVRDIRGNVDTRMRKVTDGELDAVVLARAGLARVGR 174
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ P+P QGA+ +E + L V++ + + +V ERA LA L
Sbjct: 175 LAGITETLDPLQMLPAPAQGALAVECRVDDVDTEHLLQSVLDDQASRVAVAAERAMLAAL 234
Query: 241 DGSCKSAIAGFAYCKGS---------TLYFYGIVLASD--GKI-FHEVSRNGNRCDAINI 288
+ C + + A L+ G+V D G++ S G A +
Sbjct: 235 EAGCSAPVGALAEVVEDLDADGRVAQRLFVRGVVAVDDASGRVDLLRASVTGETTAAEQL 294
Query: 289 GRDAAQYIRF 298
GR+ A +
Sbjct: 295 GRELAAQLLD 304
>gi|327489115|gb|EGF20910.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1058]
Length = 306
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 109/303 (35%), Positives = 162/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFLQAGQTLANL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
++ + L P+ QGA+ +E + + + L+ + E T V ERA LA
Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA A KG ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|34581586|ref|ZP_00143066.1| porphobilinogen deaminase [Rickettsia sibirica 246]
gi|28262971|gb|EAA26475.1| porphobilinogen deaminase [Rickettsia sibirica 246]
Length = 351
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG
Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFAYCKG 256
LD +C++ IA ++
Sbjct: 238 LDANCRTPIAAYSQYLD 254
>gi|15892629|ref|NP_360343.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7]
gi|20138263|sp|Q92HR5|HEM3_RICCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15619798|gb|AAL03244.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7]
Length = 351
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG
Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRMPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFAYCKG 256
LD +C++ IA ++
Sbjct: 238 LDANCRTPIAAYSQYLD 254
>gi|254519530|ref|ZP_05131586.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA]
gi|226913279|gb|EEH98480.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA]
Length = 290
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 165/293 (56%), Gaps = 6/293 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA A + + + + I ++++ T+GDR + TL +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQADKVIELIKEKNNINAKKLLVV---TEGDRRLDVTLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L + ++ A R+DIRDVF+S +DL +
Sbjct: 60 KEIEYALLNKEAHAAVHSMKDVPFELSEDFELVAIPERDDIRDVFVSSNGIHFQDLKEGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSS+RR A+L + R D++++ RG ++TRL+K+ I+LA AGIKRL E +I
Sbjct: 120 IIGTSSIRRAAMLKKLRGDLNIVPIRGNVQTRLDKMKKENMDGIILAAAGIKRLGLEDII 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++F P+ GQGA+ IE N + +K +++++ +V ER+F+ +L+G C
Sbjct: 180 TDYFDPKEFLPAIGQGALGIEALKNG-EYNNYLKKLDNKEVRIAVEAERSFMKKLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I ++ K LY G GK + G + + I +G AQ I
Sbjct: 239 SVIGVYSEIKNDDLYMIGT-FDVGGK-IIKKDILGKKSENIELGFKLAQKILE 289
>gi|256810719|ref|YP_003128088.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86]
gi|256793919|gb|ACV24588.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86]
Length = 292
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 145/297 (48%), Gaps = 12/297 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ +++ I + T GDR+ N+ L++IG G+FT
Sbjct: 2 IRIGTRGSKLALYQANKVAELLKNL----GYDVEIKIIKTTGDRVLNKKLSDIGI-GVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + D
Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNK-NVDFDENSEI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSSLRR+A L + RG ++TRL KL + AI+L+ AGI RL
Sbjct: 116 IIGTSSLRRRAFLKFLYPNARFELLRGNVDTRLKKLKDGLYDAIVLSEAGIIRLGINLDD 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ P+P QG I + ++ + +E++K INH+ T+ +CERA L + G C
Sbjct: 176 FNYKRLNIL-PAPAQGIIAVACKRDDEEIKEILKEINHKKTYLGSSCERAALNQFGGGCS 234
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297
A L V+ D D AI +G++ + +R
Sbjct: 235 VPFGALAVYDEKNEVLKLNAGVVIEDELKTASGEVKCKIDDIDKAIELGKNIGKKLR 291
>gi|158518657|sp|Q8TXC8|HEM3_METKA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
Length = 298
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 4/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+ TR S LA+ E L + I+ ++GD + +R L ++G
Sbjct: 1 MSE-TIRVATRSSRLAIIQTREVIELLERESPR-DVEVEIVKTKSRGDVVRDRPLHKLGE 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+
Sbjct: 59 KGVFVKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSR-HGGLKE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL
Sbjct: 118 LPRGATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLG 177
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL
Sbjct: 178 MTSEVSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVREL 237
Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + G + + DG H + G+ D + A+ +
Sbjct: 238 GVGCSEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVVREAVSQAREVLSD 297
Query: 300 S 300
Sbjct: 298 G 298
>gi|315223357|ref|ZP_07865216.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287]
gi|314946688|gb|EFS98677.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287]
Length = 288
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 143/297 (48%), Gaps = 10/297 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
RIGTR S LAL A ++ L + + I+ + GD ++ L E+G G
Sbjct: 1 MNTIRIGTRDSELALWQAKTVQNQLKTL----GYATEIVSTKSHGDIELSKPLYEMGVTG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+ ++ L++ EID AVHS KD+PT L +G+ + A L R + DV + S +
Sbjct: 57 IFTKALDIALLNSEIDIAVHSMKDVPTALPEGIVVGAVLKRGNPHDVLVYKGDLSFLEAE 116
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K
Sbjct: 117 I-VTIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERINKL 175
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
L ++ P+P QGAI + N Q+ + ++ + T+ + ER FL L+G
Sbjct: 176 PEKH--LVLDWMLPAPAQGAIVVVVREANVALQKKLLPLHDDYTYIATQLERDFLRALEG 233
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCDAINIGRDAAQYIRF 298
C + I FA K LYF G + + DGK + G A +R
Sbjct: 234 GCTAPIGAFAEFKDDKLYFKGGLWSEDGKESSVIDEVLTQIDEYT--GEKLATMVRS 288
>gi|222529189|ref|YP_002573071.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725]
gi|222456036|gb|ACM60298.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725]
Length = 290
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 6/296 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG R S L+ + +P+ TKGD ++L + G
Sbjct: 1 MKKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFQSPG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+S EID AVHS KD+P ++ I A + RED RDV +S L
Sbjct: 58 VFVKEIELALLSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDPRDVLVSKDGVGFYQLK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 118 PNAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLD 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ + +I + P PGQGAICIE ++P ++ IN + + ER L L G
Sbjct: 178 SHVSYVFDINEITPCPGQGAICIECLEDSPYK-SILSKINDVNAYIQTQFERLVLKLLGG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C S+I F +Y + +L G + S G++ D +++ + ++
Sbjct: 237 GCHSSIGVFCKTDQDKIYAFASLLR--GDKLVKASIEGDKADFLSLANKLSNMLKS 290
>gi|257463595|ref|ZP_05627986.1| porphobilinogen deaminase [Fusobacterium sp. D12]
gi|317061149|ref|ZP_07925634.1| porphobilinogen deaminase [Fusobacterium sp. D12]
gi|313686825|gb|EFS23660.1| porphobilinogen deaminase [Fusobacterium sp. D12]
Length = 301
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 6/301 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58
M K +G+R S LALA + L + P I + T+GD+ +E+
Sbjct: 1 MLKHHIILGSRGSILALAQTNWVKKQLQRHY--PQLTFSIQVIETQGDKDLTSHFGNSEL 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV +S + ++L
Sbjct: 59 SLKSFFTKEIEKSLLDGEIDIAVHSMKDVPSSSPVGLICGAIPVREDVRDVLVSTSGKTL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
DL S++GTSSLRR + + R D+ + RG I TRL KL AI+LA AG+KR
Sbjct: 119 ADLPKGSILGTSSLRRIQNIKQLRPDLEIKALRGNIHTRLKKLEEGHYDAIVLAAAGLKR 178
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ E+ I E LN F P+P QGA+ I+ + + + +++ I+ E+ + ER F
Sbjct: 179 VGLEEKITEYLNPTVFSPAPAQGALYIQCREKDEETRNILQSIHDENLAKILEIEREFSR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C + + ++ +G ++F+ + + ++ + I AAQ I+
Sbjct: 239 IFDGGCHTPMGCYSKVEGKKIFFHAMYSHK--EKSYQTIITESITKGKEIAIMAAQEIQK 296
Query: 299 I 299
+
Sbjct: 297 M 297
>gi|238650859|ref|YP_002916714.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic]
gi|259646264|sp|C4K265|HEM3_RICPU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238624957|gb|ACR47663.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic]
Length = 351
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG
Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFAYCKG 256
LD +C++ IA ++
Sbjct: 238 LDANCRTPIAAYSQYLD 254
>gi|157828627|ref|YP_001494869.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933343|ref|YP_001650132.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa]
gi|189028152|sp|B0BY00|HEM3_RICRO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189028153|sp|A8GSI6|HEM3_RICRS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157801108|gb|ABV76361.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908430|gb|ABY72726.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa]
Length = 351
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG
Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ E+ INH T++ + ERAFL
Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFAYCKG 256
LD +C++ IA ++
Sbjct: 238 LDANCRTPIAAYSQYLD 254
>gi|284161707|ref|YP_003400330.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631]
gi|284011704|gb|ADB57657.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631]
Length = 292
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 108/299 (36%), Positives = 161/299 (53%), Gaps = 12/299 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ +GTR S LALA + L + +++ I + + GD + ++ L E G
Sbjct: 1 MSER-VVVGTRGSKLALAQTSKVVERLKE----EGYSVEIRIIKSTGDIMKDKPLYEFKG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F +E L+ GEID AVHS KD+P+ +L+G+ +SA L R+ D FI+ +SL++
Sbjct: 56 SGAFVRALEHALVRGEIDVAVHSYKDIPSNMLEGVTVSAVLERDSPYDAFIARNGESLEE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ ++VIGTSSLRR+A L +RSD+ + RG ++TRL KL AI+LA AGI+RL
Sbjct: 116 IKPNAVIGTSSLRRRAQLKLYRSDLRFENLRGNVDTRLRKLREGLYDAIVLAEAGIQRLG 175
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
V + L IE F P QG I ++T V +LVK +NHE+TW ER + L
Sbjct: 176 -LNVKYQRLPIERFVPPANQGIIAVQTRVGEE---DLVKFMNHEETWIEAEVERIVMKTL 231
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C +A C+G + V+ DG+ F + +R AI R+ A+ R
Sbjct: 232 GVGCAIPAGIYAECRG-KVRLIVQVIR-DGREFKVIE-ELSRESAIEEAREIAENFREE 287
>gi|168178318|ref|ZP_02612982.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916]
gi|182670871|gb|EDT82845.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
F I TR S LA L H + + T GD+I +L +IGGKGLF
Sbjct: 3 FIIATRRSNLAQVQTEIIIDLLNKKH---DIKCEKLLIETVGDKILEVSLDKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL +
Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I
Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + ++ P+ GQGA+ IE +PK +L K ++H ++ V ERAF+ ELDG C
Sbjct: 180 TDYFDTKEMVPAIGQGALGIEIMEEHPKK-DLFKDLDHYNSKICVLAERAFMRELDGDCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +A K + ++ GI + + G + +G A++I
Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 290
>gi|163787007|ref|ZP_02181454.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1]
gi|159876895|gb|EDP70952.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1]
Length = 526
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 153/308 (49%), Gaps = 10/308 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LA+ A +S L + H V++P+ + GD + ++ L E+G
Sbjct: 1 MS-KIIRIGTRDSQLAMWQAKTVQSQLEHL----GHKTVLVPVKSTGDLVLDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ +++ +ID AVHS KD+PT L KG+ +A L R +I D + +
Sbjct: 56 TGIFTKTLDIAMLNEDIDIAVHSLKDVPTILPKGIVQAAVLKRGNINDTLVYKANEEFLS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179
A +VI T SLRR+A L +++ RG + +RL KL N +A + A AG+ RL
Sbjct: 116 -ARDAVIATGSLRRRAQWLNRYPTHTIVGLRGNVNSRLEKLETNEDWNAAIFAGAGLGRL 174
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+N+ P+P QGAI I ++ + + + IN E + ER FL
Sbjct: 175 GITPEN--SINLHWMIPAPAQGAIMITALESDEETRAICAEINDEVSEICTTIEREFLNR 232
Query: 240 LDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+G C + I Y K + F G++L+ DG E ++ + + AA YI
Sbjct: 233 LEGGCTAPIGAICYINKEEEVNFKGVLLSKDGTKKIEYTKVVALDQKDELAKLAADYIIE 292
Query: 299 ISNKNVFN 306
K + +
Sbjct: 293 KGGKTLID 300
>gi|282165595|ref|YP_003357980.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE]
gi|282157909|dbj|BAI62997.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE]
Length = 303
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA+A A + L + + T GD T+ L + G G F
Sbjct: 1 MRVGTRGSRLAMAQARKVCGLLSER----GVEASPAIIKTSGDVHTSEPLHAMKGVGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
EI+ +L++GE+D AVHS KD+PTK +GL +A L RE DV ++ + L +L +
Sbjct: 57 REIDDRLLAGEVDIAVHSLKDVPTKRPEGLATAAVLKRESALDVAVTREGKKLSELEEGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR AL+ + + + RG ++TRL KL + AILLA AG+ RL + +
Sbjct: 117 VVGTSSTRRAALIKKHYPHLRTNNIRGNVDTRLRKLGEGEYDAILLAEAGLIRLGMDIIK 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ DF PS QG I I P+ + V +N DTW ERA + LDG C
Sbjct: 177 -ERLDPYDFVPSANQGVIAIVARPGTPE-FDAVSALNDHDTWLETGVERAIASALDGGCV 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ + +A +G L VL+ DG+ V D A+ + +++
Sbjct: 235 APMGAYARLEGDGLDVVCEVLSLDGRRQARVRETIPVKDHERHALRLAEKLAACGGRDLV 294
Query: 306 N 306
Sbjct: 295 E 295
>gi|83308731|emb|CAJ01641.1| porphobilinogen deaminase (ec 4.3.1.8) [Methylocapsa acidiphila]
Length = 293
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 122/292 (41%), Positives = 169/292 (57%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA A E R L +I I I+ + T GD I +R L+E GGKGLFT+E++ L+
Sbjct: 1 MALAQAHELRGRLAASSRIDGDAIEIVVIKTSGDVIQDRALSEAGGKGLFTKELDFALMR 60
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
GE+D AVHSAKD+PT L + I+ YLPRED+RD +IS A +L +V+GT+SLRR
Sbjct: 61 GEVDIAVHSAKDLPTSLPGEIAIAGYLPREDVRDAWISPKAAHPLELPAGAVVGTASLRR 120
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
A++ R R D+S++ RG +ETRL KL + A LLA AG+KRL E +L+ +F
Sbjct: 121 GAMVKRLRPDLSIVLLRGNVETRLGKLAAGEVDATLLALAGLKRLGLEDRATAVLDAGEF 180
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+ GQGAI I + A + + + T ++ ERAFL LDGSCK+ I A
Sbjct: 181 VPAAGQGAIAITLRAGDQAALDALAPVLDAATGAALAAERAFLHVLDGSCKTPIGAHARL 240
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G + F+G+VL DG F EV +G+ +A +G A +R F
Sbjct: 241 AGDEINFHGVVLKPDGSQFFEVVLSGSAREAAALGAAAGDDVRARLPAAFFE 292
>gi|15668749|ref|NP_247548.1| porphobilinogen deaminase [Methanocaldococcus jannaschii DSM 2661]
gi|2495178|sp|Q57989|HEM3_METJA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|1591276|gb|AAB98563.1| porphobilinogen deaminase (hemC) [Methanocaldococcus jannaschii DSM
2661]
Length = 292
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 12/298 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ + + I + T GDR+ ++ L++IG G+FT
Sbjct: 2 IRIGTRGSKLALYQANKVAELLKNL----GYKVEIKIIKTTGDRVLDKKLSDIGI-GVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + + +
Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYHDLLIWNKDIDFNEDS-KI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR+A L + RG ++TRL KL AI+L+ AGI RL
Sbjct: 116 VIGTSSMRRRAFLKFIYPNAKFELLRGNVDTRLRKLKEGLYDAIVLSEAGIIRLGVSLED 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ P+P QG I + ++ + + ++K INHE T+ CER L E G C
Sbjct: 176 FNYKRLDIL-PAPAQGIIAVACKRDDEEMKSILKEINHERTYLESLCERTALNEFGGGCS 234
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298
A L V+ +D + A+ +G+ ++
Sbjct: 235 VPFGALAVYDEKNELLKLKAAVVTNDELKNASGEVKCKIDEIDKAVELGKKIGLKLKN 292
>gi|158287571|ref|XP_564464.3| AGAP011080-PA [Anopheles gambiae str. PEST]
gi|157019715|gb|EAL41625.3| AGAP011080-PA [Anopheles gambiae str. PEST]
Length = 599
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 17/308 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K R+G+R S LAL S L ++ P I ++T GDR+ N++L +IG K
Sbjct: 11 TKTIRVGSRKSELALTQTKHVISLLQKLN--PDVVYEIHTMTTVGDRVLNKSLPKIGEKS 68
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + +
Sbjct: 69 LFTKDLEDALRTGGVDFVVHSLKDLPTSLPLGMAIGAVLEREDPRDALVLNERHRGCTLA 128
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGIK 177
L S++GTSSLRR A L R+ S ++V D RG + TRL KL+ K I+LA AG+
Sbjct: 129 TLPRGSIVGTSSLRRSAQLARYYSHLAVCDIRGNLNTRLAKLDAEASKFAGIILAQAGLV 188
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ K I +I+ + + GQGA+ +E N+ ++ + H +T + ER+FL
Sbjct: 189 RMGWNKRIDQIIEPHEILYAVGQGALAVECRSNDEYILGMLGKLCHLETQCRILTERSFL 248
Query: 238 AELDGSCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L G C + +A GS L G V + DGK + A +
Sbjct: 249 KTLGGGCSAPVAVRTDLKRRWRADDAEDGSPLVVEGAVWSLDGKTEIRTKGDCALDLADS 308
Query: 288 IGRDAAQY 295
G + +
Sbjct: 309 RGTNGGRK 316
>gi|309389759|gb|ADO77639.1| porphobilinogen deaminase [Halanaerobium praevalens DSM 2228]
Length = 310
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 159/307 (51%), Gaps = 6/307 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK + IGTR S LAL ++ L K P I +ST GDR ++ +EI +
Sbjct: 1 MKKEYIIGTRNSSLALKQCEILKAKLSS--KFPELEFKIKEISTTGDRERDKKFSEINVE 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F EIE L++ EID AVHS KD+PTKL L+++A + R + DV + L +L
Sbjct: 59 GIFIREIEYALLAEEIDLAVHSFKDLPTKLPAELEVAAVVDRANRYDVLAGAENK-LAEL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
A + +GT SLRRK+ LL +R D+ ++ RG IETRL K+ + ++LA AG++RL
Sbjct: 118 AKGARLGTGSLRRKSQLLAYRPDLEIVPIRGNIETRLKKIKTHNLDGVILAAAGLERLGY 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ I E L E P+ QGA+ +E + K +E++K I E V E +FLAE++
Sbjct: 178 KEQITEYLAPEICLPAARQGAVAVEIRKEDSKLKEILKTIETEKNNLEVWTEHSFLAEME 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRF 298
C + +A A + TL V DG + ++ + ++ + A ++
Sbjct: 238 AGCHAPVAAEAIIENKTLTLTAAVGEIDGSRIIKKVAKTKKLDLDSVRSLAQKLAVKVKQ 297
Query: 299 ISNKNVF 305
+
Sbjct: 298 AGAAEII 304
>gi|256371068|ref|YP_003108892.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331]
gi|256007652|gb|ACU53219.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331]
Length = 291
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 147/300 (49%), Gaps = 16/300 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RI TR S LA A L ++ + T GDR +L EIGG+G+F
Sbjct: 3 PVRIATRRSALARWQASLVGERL--------GRYELVEVHTAGDRDQASSLAEIGGQGVF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E++ ++ GE D AVHSAKD+PT L ++A L R D RD + L++LA+
Sbjct: 55 VKEVQAAVVRGEADIAVHSAKDLPTA-AGPLLLAAVLERADARDAIVG---ARLEELAIG 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTS+ RR A L R D+ V+ RG I TRL ++ + AI++A A ++RL E+
Sbjct: 111 ARVGTSAPRRAAQLRLLRPDLEVVSIRGNIATRLGRV--GELDAIVMAVAALERLGLEEP 168
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L E P GQGAI +E + E ++ ++ + + + ERA LA C
Sbjct: 169 PWWPLPEEVLCPQAGQGAIAVECAPDADGLIERLRSLDDDRSRREIEAERAVLAAFGTGC 228
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ A+ GS+L + + DG EV R G D +G A+ +R + +
Sbjct: 229 ALPLGARAHADGSSLRLRAVAVDPDGTRQLEVEREG--VDPATLGATVAEVLRRLGADAL 286
>gi|269796870|ref|YP_003316325.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542]
gi|269099055|gb|ACZ23491.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542]
Length = 312
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 150/317 (47%), Gaps = 17/317 (5%)
Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M P RIGTR S LAL L + P + I+P++T GD + +L+++G
Sbjct: 1 MTGHPALRIGTRSSLLALTQTGTVADDLRRLTGRP---VEIVPVTTDGD-VLTGSLSQMG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G G+F + L+ D AVHS KD+PT + GLQ R+D RD S L
Sbjct: 57 GTGVFVTALRAALLDDRCDVAVHSLKDLPTAGVLGLQHVT-PVRQDPRDALCSRAGHRLA 115
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177
DL + +GT S RR A L R D+ V+D RG I+TRL ++ A++LA AG+
Sbjct: 116 DLPHGARVGTGSPRRAAQLRLVRPDLDVVDIRGNIDTRLGRVHPETGDLDAVVLAAAGLN 175
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH----EDTWDSVNCE 233
R+ +E I E++++ D P+PGQGA+ +ET + + +V T SV E
Sbjct: 176 RIGREHAITELISVTDMAPAPGQGALAVETRSSLLEEDPVVARAFDQLDDPATSLSVLAE 235
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AINI 288
RA LA L+ C + + A L + +V DG +++ D A+ +
Sbjct: 236 RALLARLEAGCAAPVGTHATVSDGLLTLHAVVARPDGSEQLRHNQSTEVADTSTAEAVAL 295
Query: 289 GRDAAQYIRFISNKNVF 305
G A + + +
Sbjct: 296 GEAVADHFLALGAASFI 312
>gi|293402361|ref|ZP_06646498.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304208|gb|EFE45460.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 299
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 2/292 (0%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
IGTR S LALA + + R+ L + + P H+ + ++TKGD + L ++ KG+F +
Sbjct: 4 IIGTRGSALALAQSEQVRTLLQNTY--PQHSFTLQIIATKGDLQQHVALDQMDAKGIFVK 61
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EIE+ L++G+I AVHS KDMPT+L KGL + L RED RDVFIS T + +L +
Sbjct: 62 EIEEALLAGKIHMAVHSLKDMPTQLPKGLCFTKTLLREDARDVFISRTKTAFHELGPQAK 121
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RRK L++ R DISV+ RG ++TRL K+ + I+LA AG+KRL+ + +
Sbjct: 122 IGTGSKRRKVQLMKLRPDISVVGIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLQVQGISY 181
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E P+ GQGA+ IE + ++ + + + ER FL +DG C +
Sbjct: 182 EYFPYTSMIPACGQGALAIEVKEQDATLLTMINALANTHIDQEIQIERTFLQAIDGGCHT 241
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+ + F + D + DA + +AA+Y+
Sbjct: 242 PVGAHCKITEKEIVFDALYGNEDCSKMCNLHWRRPLTDAQQLPFEAAKYLIK 293
>gi|58585034|ref|YP_198607.1| porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419350|gb|AAW71365.1| Porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 292
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+A A E + L+D+ ++ II + T GD+ N L EIGGKGLF
Sbjct: 3 IRIGTRGSSLAIAQALEAKQKLLDL--FSSLSVEIIKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +LI ID AVHS KD+P K L I L R D FIS+ +SLK L +
Sbjct: 61 KEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+I TSS+RRK LL +R D++++ RG + TR L N I+LA AG+ RLKK+ +I
Sbjct: 121 IIATSSIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLKKDYLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L+ + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 178 TEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCF 237
Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A Y + L+ Y ++ D K + R DA +G DA ++
Sbjct: 238 TPLAALAKYVSENVLHLYCMLA--DKKNIYFTERTSFVEDAEKMGMDAGLELKSK 290
>gi|225872374|ref|YP_002753829.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196]
gi|225793745|gb|ACO33835.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196]
Length = 312
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 104/324 (32%), Positives = 151/324 (46%), Gaps = 39/324 (12%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT----EIGGK 61
RIG+R S LAL A + L + H + I + T GD + + T E+GGK
Sbjct: 2 MRIGSRGSQLALWQANHIAARLRTL----GHEVTIEIIRTTGDALQHVTFAKVSTELGGK 57
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT+EIE+ L G ID AVHS KD+PT L ++A R D RD +S SL L
Sbjct: 58 GIFTKEIEEALREGRIDLAVHSLKDLPTDLDPAFTLAAIPERVDPRDALLSARYTSLASL 117
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GTSS RR+A LL RSD+ +FRG ++TR+ K+ +A AI+LA AG++RL
Sbjct: 118 PHGACVGTSSERRRAQLLVHRSDLRFQEFRGNVDTRIRKMVEGQADAIILASAGLERLGL 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +E L E P+ GQGA+ IET ++ + ++ ++H T +V ER LA L
Sbjct: 178 TEYRRECLAPEILCPAAGQGALAIETRADDAETLAILASLDHSATRYAVTAERTALASLG 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC------------------ 283
G C+ I V +DG + G
Sbjct: 238 GGCQVPIGIHC----------APVPGADGAYAIQGVVAGAAAKAASSAAHPVIRVAFEHQ 287
Query: 284 ---DAINIGRDAAQYIRFISNKNV 304
+GR A+ + +
Sbjct: 288 QGLSPQALGRQLAEELLRQGAQPF 311
>gi|167754990|ref|ZP_02427117.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402]
gi|237735283|ref|ZP_04565764.1| porphobilinogen deaminase [Mollicutes bacterium D7]
gi|167705040|gb|EDS19619.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402]
gi|229381028|gb|EEO31119.1| porphobilinogen deaminase [Coprobacillus sp. D7]
Length = 297
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 3/292 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+G+R S LAL L + P + I + T GD++ + L +I KG+F
Sbjct: 2 KIIVGSRGSSLALKQTEYVIEKLQRAY--PENEYEIKVIHTIGDKMQHIALDKINDKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIEK+L+ ID AVHS KDMP+ GL + L D RD + SL L H
Sbjct: 60 VKEIEKELLEHTIDLAVHSLKDMPSDNPAGLVYAKTLAPSDYRDCLVLKNCSSLARLPQH 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ I T S RRK LL+ R D+ ++D RG + TRL K+ N + ++LA AG+KRL E +
Sbjct: 120 ATIATGSKRRKYQLLKLRPDLKIVDIRGNVNTRLQKMANQEIDGLVLASAGLKRLGLEDL 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I E L+ P+ GQG + I+ + + ++ I+ E T + ER FL ++GSC
Sbjct: 180 ISEYLDETKMIPACGQGILAIQVR-QDSELLTMINNISDEITTTRMELERLFLKTVNGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ G+A G ++FYG++ DG + + + + DA A+ +
Sbjct: 239 HIPVGGYAKIIGDQVHFYGLLGNEDGTVLKNIDKKFSLKDASEEVTALAEML 290
>gi|290958356|ref|YP_003489538.1| hydroxymethylbilane synthase [Streptomyces scabiei 87.22]
gi|260647882|emb|CBG70987.1| putative hydroxymethylbilane synthase [Streptomyces scabiei 87.22]
Length = 322
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 154/320 (48%), Gaps = 20/320 (6%)
Query: 1 ME---KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
M + R+GTR S LA++ + + ++ + P + ++ ++T GD + L +
Sbjct: 1 MSEPHNRALRLGTRRSTLAMSQSRQVADAVRRLTGRP---VELVEITTYGDVSREQ-LAQ 56
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IGG G+F + + L+ GE+D AVHS KD+PT L ++A R D RDV ++ +
Sbjct: 57 IGGTGVFVAALREALLRGEVDFAVHSLKDLPTTYPDELTLAAVPVRADARDVLVARDGLT 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAY 173
+ L + +GT S RR A L + + RG ++TR+ + + A++LA
Sbjct: 117 FEQLPAGARVGTGSSRRMAQLNAYARGHGLTIETVPIRGNVDTRIGYVRKGELDAVVLAA 176
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ + + + L+++ P+PGQGA+ IE + + + ++ DT +V E
Sbjct: 177 AGLSRIGRIDEVTDFLSVDTVLPAPGQGALAIECAAADAELIAALAGLDDPDTRAAVTAE 236
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CD 284
R+ LA L+ C + + FA + G+V +DG ++S G
Sbjct: 237 RSLLAALEAGCSAPVGAFADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETYDQ 296
Query: 285 AINIGRDAAQYIRFISNKNV 304
A+ +GR+ A + +
Sbjct: 297 AMALGRELAAEMLAKGAAGL 316
>gi|20094183|ref|NP_614030.1| porphobilinogen deaminase [Methanopyrus kandleri AV19]
gi|19887202|gb|AAM01960.1| Porphobilinogen deaminase [Methanopyrus kandleri AV19]
Length = 305
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 84/297 (28%), Positives = 148/297 (49%), Gaps = 3/297 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S LA+ E L + I+ ++GD + +R L ++G KG+F
Sbjct: 11 TIRVATRSSRLAIIQTREVIELLERESPR-DVEVEIVKTKSRGDVVRDRPLHKLGEKGVF 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+L
Sbjct: 70 VKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSR-HGGLKELPRG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL
Sbjct: 129 ATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLGMTSE 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL C
Sbjct: 189 VSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVRELGVGC 248
Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ G + + DG H + G+ D + A+ +
Sbjct: 249 SEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVVREAVSQAREVLSDG 305
>gi|194748513|ref|XP_001956689.1| GF24457 [Drosophila ananassae]
gi|190623971|gb|EDV39495.1| GF24457 [Drosophila ananassae]
Length = 648
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 18/300 (6%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I
Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118
Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+ SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA
Sbjct: 119 HTIASLPNGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ +++ + +T + E
Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDEPVLAMLQKLMCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
R+FL L G C + +A ++ KG L G V + DG I +
Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNGNTQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298
>gi|221134062|ref|ZP_03560367.1| porphobilinogen deaminase [Glaciecola sp. HTCC2999]
Length = 328
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 37/324 (11%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A ++ L + P ++ ++P+STKGDRI + L ++GGKGLF +E+E + G
Sbjct: 1 MWQAEYVQAQLKAHY--PDMSVNLVPMSTKGDRILDTPLAKVGGKGLFIKELEVAMQEGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D AVHS KD+P + +G + A PRE+ D F+S+T + L +V+GTSSLRR+A
Sbjct: 59 ADIAVHSMKDVPVEFPEGFGLHAICPRENPFDAFVSNTYDDIDSLPKGAVVGTSSLRRQA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L R D+++ D RG + TRL KL+ + AI+LA AG+ RLK I+ ++ P
Sbjct: 119 QLRARRPDLTIKDLRGNVNTRLAKLDAGEYDAIILACAGLIRLKMHDRIRSEIDPLTSLP 178
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ GQGA+ IE +N ++++ + +T V ERA A+L G C+ I FA +
Sbjct: 179 AVGQGAVGIECRDDNLALIDVLQCLACPETTIRVMAERAMNAKLQGGCQVPIGSFATLET 238
Query: 257 S-----TLYFYGIVLASDGKIFHEVS------------------------------RNGN 281
S LY G+V DG + E +
Sbjct: 239 SQDGYRELYLKGLVATVDGSVLLESDGSVILAKTAEEMMNDITDTSVTLNSPLEQIEEVH 298
Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305
AI +G+ A + ++
Sbjct: 299 IQQAIQLGQHIASQLIEQGAADIL 322
>gi|325690356|gb|EGD32360.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK115]
Length = 306
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 162/303 (53%), Gaps = 9/303 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG
Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVEQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121
+F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL
Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL
Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178
Query: 182 EKV---IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ L P+ QGA+ +E + + ++L+ + E T V ERA LA
Sbjct: 179 LDQSLLHIQPLETRLCLPAISQGALAVEYREEDEELRKLLATVQDEKTAAEVAVERAVLA 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+++ C IA A KG ++ DG+ VS G D + A + +
Sbjct: 239 QMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295
Query: 299 ISN 301
Sbjct: 296 KGA 298
>gi|124485351|ref|YP_001029967.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit
[Methanocorpusculum labreanum Z]
gi|124362892|gb|ABN06700.1| uroporphyrin-III C-methyltransferase [Methanocorpusculum labreanum
Z]
Length = 542
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 24/307 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LALA + L + + + + T GD++T+R L +IGG
Sbjct: 1 MSK--IRIGTRGSKLALAQTKKVIGLLAEN----GIDAEYVIIKTTGDKVTDRGLHQIGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F E++ ++ GEIDCAVHS KD+P + KGL A L R+ D + +
Sbjct: 55 FGMFVRELDNAILRGEIDCAVHSMKDIPAERPKGLLTVAVLKRDPPYDFLVMNG-----K 109
Query: 121 LALHSVIGTSSLRRKALLLRWRSDIS---VIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ VIGTSSLRRKA LLR+ + V RG ++TRL KL++ I++A AG+
Sbjct: 110 VEDLMVIGTSSLRRKAQLLRYFHNCPAVRVEMLRGNLDTRLGKLDDGLYDGIMVAEAGLM 169
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL K L+ + F P+ QG I I + P+ + +N + ER +
Sbjct: 170 RLDY-KRNGVRLSPDMFVPAANQGTIAI-VSRDTPELRAAFAPLNDPQSALDCAIERIVM 227
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDA---A 293
++ G C + + F + + VL+ DG ++ G+ A G
Sbjct: 228 EQVGGGCFTPMGIFCENQ----HLTAEVLSLDGTRAERITAEIGDLEGARVAGIRLKNVG 283
Query: 294 QYIRFIS 300
+ +
Sbjct: 284 AELIAEA 290
>gi|54310580|ref|YP_131600.1| putative porphobilinogen deaminase [Photobacterium profundum SS9]
gi|46915023|emb|CAG21798.1| putative porphobilinogen deaminase [Photobacterium profundum SS9]
Length = 234
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 84/201 (41%), Positives = 121/201 (60%), Gaps = 2/201 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG
Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PSLVVELVPMVTKGDIILDTPLAKVGG 89
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ +
Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+
Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209
Query: 181 KEKVIKEILNIEDFPPSPGQG 201
I+ + E+ P+ GQG
Sbjct: 210 MHDRIRSAIEPEESLPAVGQG 230
>gi|227549755|ref|ZP_03979804.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078141|gb|EEI16104.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM
44291]
Length = 301
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 13/305 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LA A R ++ H+ + ++T GD ++ E G G+FT
Sbjct: 2 LHIGTRGSHLATTQAGHVRDDIIAA----GHDAELTIVTTPGD--LSQAPVERIGVGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L GE++ AVHS KD+PT I RED R+ I+ L DL +
Sbjct: 56 SALRDALFRGEVEIAVHSFKDLPTADEPRAHI-VVPAREDNREALIARDGMQLADLPQGA 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTS+ RR + L R D+ + RG IE+R+ ++ + + AI+LAYAG+ R
Sbjct: 115 RVGTSAPRRISQLKALRPDLDIRPLRGNIESRMGRVTSGELDAIVLAYAGLLRAGYGDRA 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + +F P+P QGA+ +E ++ + + ++ + T V+ ER LA L+ C
Sbjct: 175 TQLFDASEFLPAPAQGALAVECRSDDAETRAVLDPLMDAATALQVSAERHVLATLEAGCT 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD------AINIGRDAAQYIRFI 299
+ +A A+ G L V A DG S + D A +GR+ A +
Sbjct: 235 APVAAHAFYDGGELSLRAGVFALDGSHQLVESGSVTVADTLDREAARGLGRELASRLLDA 294
Query: 300 SNKNV 304
+
Sbjct: 295 GAAEL 299
>gi|330507063|ref|YP_004383491.1| porphobilinogen deaminase [Methanosaeta concilii GP-6]
gi|328927871|gb|AEB67673.1| porphobilinogen deaminase [Methanosaeta concilii GP-6]
Length = 305
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 9/301 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR SPLAL + L + + + T GD ++ L ++ G G+F EI
Sbjct: 2 GTRGSPLALRQTQIVQERLKGL----GIQTQLCRVKTSGDVFLDKPLHQLTGFGVFVAEI 57
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLALHSV 126
+++++SG+ID AVHS KD+PTK + L +SA L R+ DV + +S+++L +
Sbjct: 58 DERMLSGKIDLAVHSMKDLPTKRPEELIVSAVLKRDSPYDVLLCREKSVKSIEELDQGAR 117
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
+GTSS+RR A LLR R D++++ RG ++TRL+KL AI+LA AG++R+
Sbjct: 118 VGTSSMRRMAQLLRARPDLNILSLRGNLQTRLSKLERGDYDAIVLAEAGLERMGY-HPDY 176
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L+ E F PS QG I + +A+ + ++ ER + + G C
Sbjct: 177 VRLDGERFVPSANQGTIIV-VAKAGSEAEACSRALDDAHARSETMIERKIMETVGGGCVV 235
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRDAAQYIRFISNKNVF 305
+A A + VL+ DGK F + + + + + D + + + + +
Sbjct: 236 PMAVHALVQKGEARVLAEVLSPDGKRFVRLEERISLVQNHLAVAEDMGERLMRMGGRELV 295
Query: 306 N 306
+
Sbjct: 296 D 296
>gi|312622563|ref|YP_004024176.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis
2002]
gi|312203030|gb|ADQ46357.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis
2002]
Length = 290
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 146/296 (49%), Gaps = 6/296 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG R S L+ + +P+ TKGD ++L + G
Sbjct: 1 MKKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L S EID AVHS KD+P ++ I A + RED RDV +S L
Sbjct: 58 VFVKEIELALFSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDSRDVLVSKDGVGFYQLK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL +
Sbjct: 118 PNAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLD 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I ++ + P PGQGAICIE ++P ++ IN D + ER L L G
Sbjct: 178 SRVSYIFDVNEITPCPGQGAICIECLKDSPYK-NILNKINDTDAYIQTQFERLVLKFLGG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C S+I F +Y + +L G + S G++ D +++ + ++
Sbjct: 237 GCHSSIGVFCKTDQDKIYAFASLLR--GDKLVKASIEGDKADFLSLANKLSNMLKS 290
>gi|300779915|ref|ZP_07089771.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC
33030]
gi|300534025|gb|EFK55084.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC
33030]
Length = 295
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 91/305 (29%), Positives = 139/305 (45%), Gaps = 10/305 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+ TR S LA A R +L+ H+ + ++T GD + IG
Sbjct: 1 MTE-TLRVATRGSKLATTQAGHIRDALISA----GHSAELTIVTTAGDMSQ-APVERIG- 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT I + L GE D AVHS KD+PT + RED R+ I+ L D
Sbjct: 54 VGVFTTAIRQALFDGEADVAVHSFKDLPTAHEPRTHLI-IPVREDRREALIARDGLKLAD 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+ RR A L R D+ + RG IE+R+ ++ + + A++LAYAG+ R+
Sbjct: 113 LPSGARVGTSAPRRIAQLRAKRPDLDIHPLRGNIESRMGRVTSGELDAVVLAYAGMSRVG 172
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+ EDF P+P QGA+ +E + +A + + + ER LA L
Sbjct: 173 LGERATEVFAPEDFMPAPAQGALAVECRAEDAQAVAAIDTLVDDFATRCALTERFVLATL 232
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+ C + +A A G + G V A DG +G D +G+ AQ +
Sbjct: 233 EAGCTAPVAASAVLDGDEITVRGGVFALDGSAQLVREASGT--DPREVGQACAQQLFDAG 290
Query: 301 NKNVF 305
Sbjct: 291 AAQFL 295
>gi|162147854|ref|YP_001602315.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542474|ref|YP_002274703.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786431|emb|CAP56013.1| Porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530151|gb|ACI50088.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5]
Length = 367
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 110/320 (34%), Positives = 159/320 (49%), Gaps = 19/320 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62
P R+GTR SPLAL + L + ++T GD++ NR L EIGGKG
Sbjct: 46 PLRVGTRASPLALVQTRAFLTMLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIGGKG 105
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
LF +EI L G ID AVHS KD+ T L GL ++ L RED RD I +
Sbjct: 106 LFAKEIHDALSDGRIDFAVHSLKDLETTLPPGLVLACTLRREDARDALILGPGAGGRHDA 165
Query: 122 ----------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171
++++G +S+RR+A +L R D+ RG ++TRL+KL + A LL
Sbjct: 166 ADAADPYAALPRNALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCDATLL 225
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG++RL E +L+ E P+ GQG + + ++ + +EL+ I +
Sbjct: 226 ALAGLRRLGMEDRADIVLDPEIMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVAT 285
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDA 285
ERA LAELDGSC++ I G+A +L G+V DG + G R DA
Sbjct: 286 AERALLAELDGSCRTPIGGYARLVPGLAGAEASLRLTGLVAREDGSFLLRRTVTGLRADA 345
Query: 286 INIGRDAAQYIRFISNKNVF 305
+GR+ + +R S +VF
Sbjct: 346 EEMGRELGRSLRMDSPSDVF 365
>gi|290955334|ref|YP_003486516.1| porphobilinogen deaminase [Streptomyces scabiei 87.22]
gi|260644860|emb|CBG67946.1| porphobilinogen deaminase [Streptomyces scabiei 87.22]
Length = 296
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT+E++ L++
Sbjct: 1 MALAQVERVRAELAVLH--PALRTEVVPVKTTGDKWMG-DLSQVEGKGAFTKEVDAALVA 57
Query: 75 GEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132
GE D AVH KD+P L G +A+L R+DIRD + ++L +L + IGTSS+
Sbjct: 58 GEADLAVHCVKDIPADRPLPAGTMFAAFLKRDDIRDALVDPAGRTLDELPAGTRIGTSSV 117
Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
RR A L + + FRG RL KL +A A+LLA +G++R+ + VI E L++E
Sbjct: 118 RRTAQLAASHPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRADVISEFLSVE 177
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P G G + ++ + + V + DT ER FL L G C S IAGFA
Sbjct: 178 TMMPPIGAGVLALQCREGDALTIDTVSGLGDPDTHRETLAERMFLHVLQGHCNSPIAGFA 237
Query: 253 YCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G L V DGK R D +G A + +++ +
Sbjct: 238 RTDRGGELSLRASVFTPDGKTVLNAHEWAGRLDPATLGTSVAVALLRQGARDLID 292
>gi|195440018|ref|XP_002067856.1| GK12668 [Drosophila willistoni]
gi|194163941|gb|EDW78842.1| GK12668 [Drosophila willistoni]
Length = 629
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 18/300 (6%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M K R+G+R S LAL L ++ P I +ST GDR+ N +L +I
Sbjct: 1 MSIQDKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNISLPKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118
Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173
+ SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA
Sbjct: 119 HSIATLPKGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQ 178
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ R+ I ++L D + GQGA+ +E N+ ++++ + +T + E
Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDGPVLDMLQKLLCLNTTCRILAE 238
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284
R+FL L G C + +A ++ KG L G V + DG I +
Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPMTANSQDVGLSLTGAVWSLDGAIEIREHLACALSE 298
>gi|148284479|ref|YP_001248569.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong]
gi|167008815|sp|A5CDH4|HEM3_ORITB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146739918|emb|CAM79909.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong]
Length = 298
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 109/297 (36%), Positives = 163/297 (54%), Gaps = 7/297 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL A + + + N +IIP+ T GD I N+ L +IGGKGLF
Sbjct: 3 IRVGSRASRLALIQAQAVVQKI---NDLLGLNAIIIPIKTTGDLIQNKNLYDIGGKGLFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ ID AVHS KD+P L GLQ++A L R D+ D+ +S A + DL L +
Sbjct: 60 KEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGDVGDMLVSKIANKITDLPLGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
++GTSS+RR+ LL R D++++ FRG ++TR NK+ NN+ A +LA AG++RL +
Sbjct: 120 IVGTSSVRRRIQLLMLRPDLNIVLFRGNVDTRWNKIINNEVDATVLAAAGLQRLNYDTSR 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ + P+ GQGAI IE ++ L INH+ TW + ER +L L+ C
Sbjct: 180 FCNIIPQSEMLPAIGQGAIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADC 239
Query: 245 KSAIAGFAYCKGSTLYFYG--IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
I G A G+ F ++ + + F G +IG +AA+ +
Sbjct: 240 NVPIGGIASYIGNN-SFEAKFMLGDYNMRYFFYSEVRGKLQHGYDIGVEAAKNFQKR 295
>gi|296115106|ref|ZP_06833747.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769]
gi|295978207|gb|EFG84944.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769]
Length = 358
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 112/316 (35%), Positives = 161/316 (50%), Gaps = 15/316 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62
P ++GTR SPLAL + L + +ST GD++ NR L EIGGKG
Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQISTTGDQVLNRKLAEIGGKG 100
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
LF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I D
Sbjct: 101 LFAKEIHEALLDGRIDFAVHSLKDLETALPPGLVLACTLRREDARDVLILGPDCPTPDPM 160
Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
A +++G +S+RR+A +L R D+ RG ++TRL+KL + A LLA AG
Sbjct: 161 DPYSALAPGALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCEATLLALAG 220
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
++RL E IL+ P+ GQG + + ++ + +EL+ I + ERA
Sbjct: 221 LRRLGMEDRADVILDPTVMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVATAERA 280
Query: 236 FLAELDGSCKSAIAGFAY----CKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LAELDGSC++ I G+A G L+ G+V DG + S +G DA +G
Sbjct: 281 LLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPSDAARLG 340
Query: 290 RDAAQYIRFISNKNVF 305
+ +R S ++F
Sbjct: 341 HALGRSLRADSPSDIF 356
>gi|299134347|ref|ZP_07027540.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
gi|298591094|gb|EFI51296.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
Length = 324
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 20/318 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LF 64
RIGTR S +ALA E L P + I+ T GD+ L ++GGKG F
Sbjct: 1 MRIGTRKSVMALAQTNEIARQLTAA--DPSLAVEIVKFETMGDQDQTGKLLDLGGKGGAF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKD--- 120
+I + G ++ A+HS KDMP + GL I A L R+ D + +L +
Sbjct: 59 VAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGAMLLRDPPTDALVVRNGVTLDELRR 118
Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN------------NNKAH 167
IGT+++RR A + R + +I FRG +TR+ KL+ A
Sbjct: 119 SRGKGFKIGTNAVRRAAYVRRLFPEAEIIHFRGAADTRIRKLDGREMQRLPDGGEVGPAD 178
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
A+++A AG++R+ I + ++ P+ GQG + +E + + + I++ +
Sbjct: 179 ALVMARAGLERVGFADRIVHQFSPDEMLPAVGQGIVAVECAAADWQTLARLAGIDNAVSR 238
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
ER L L+G C S IAG+A G + VL F EV+R G
Sbjct: 239 QCGEAEREVLWVLNGHCNSPIAGYATLDGGEISLKAAVLDEANHHFIEVTRRGPVGRPRE 298
Query: 288 IGRDAAQYIRFISNKNVF 305
+GR A + +V
Sbjct: 299 LGRAVAFDLLEKGAADVI 316
>gi|182626954|ref|ZP_02954686.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721]
gi|177907690|gb|EDT70308.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721]
Length = 291
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 98/294 (33%), Positives = 154/294 (52%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + + + T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V+ ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVDAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I ++ K + LY G + + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKILEE 290
>gi|67515679|ref|XP_657725.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4]
gi|40746143|gb|EAA65299.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4]
Length = 350
Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 140/322 (43%), Gaps = 20/322 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F IGTR S LAL ++L + + P + I T GD+ T L + K
Sbjct: 14 SQKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTK 71
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA---YLPREDIRDVFISHTAQSL 118
L+T+E+E L +G +D VHS K + + RED RD +
Sbjct: 72 NLWTQELEDLLEAGSVDLIVHSLKGISYVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPN 131
Query: 119 K---DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAY 173
++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++LA
Sbjct: 132 MSLAEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAA 191
Query: 174 AGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
AG+ RL I + L+ + + GQGA+ IE + ++++ I H++T +
Sbjct: 192 AGLLRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACL 251
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRC--- 283
ER+ L L+G C + + T L +V++ DG EV +G
Sbjct: 252 AERSLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQ 311
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
A G A+ + +
Sbjct: 312 SAEEFGVTVAKALVNEGAGKIL 333
>gi|315049563|ref|XP_003174156.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311342123|gb|EFR01326.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 312
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 136/310 (43%), Gaps = 29/310 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A RS L + P H I L T GD+ N L G K L+
Sbjct: 12 PLRIGTRRSNLAVIQAKTIRSQLEKI--APEHTFEIEALHTLGDKDQNSALYNFGAKDLW 69
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E+ L SG++D VH KDMPT+L ++A R+D RD + SL+ L
Sbjct: 70 TTELEELLTSGKLDIVVHCLKDMPTQLPDSCDLAAIPLRDDPRDALVIKAGLPYTSLQTL 129
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+++GTSS+RR A L R + ++ RG +ETRL KL++ K+ I + +
Sbjct: 130 PEGAIVGTSSVRRSAQLRRLFPHLRFMNIRGNVETRLAKLDDPKSEYICIVMSACGL--- 186
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
GQGAI +E + K L + + + ER+ + L+
Sbjct: 187 ---------------ELGQGAIGLEVRKGDAKILRLTDQLLDHKSSLACLAERSLMRTLE 231
Query: 242 GSCKSAIAGFAYCKGS---TLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQY 295
G C I TL IV++ DG E + + +A +G++ A
Sbjct: 232 GGCSVPIGVETEWIDKPDATLRIRAIVVSIDGTQSVEDTTDTVVHTKEEATALGQELAAR 291
Query: 296 IRFISNKNVF 305
+ +
Sbjct: 292 LLEAGAAAIL 301
>gi|110801892|ref|YP_698741.1| porphobilinogen deaminase [Clostridium perfringens SM101]
gi|123047375|sp|Q0ST16|HEM3_CLOPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110682393|gb|ABG85763.1| hydroxymethylbilane synthase [Clostridium perfringens SM101]
Length = 291
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + + T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKKKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKDG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ K + LY G + + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKIL 288
>gi|302875078|ref|YP_003843711.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
gi|307690298|ref|ZP_07632744.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
gi|302577935|gb|ADL51947.1| porphobilinogen deaminase [Clostridium cellulovorans 743B]
Length = 300
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 103/303 (33%), Positives = 158/303 (52%), Gaps = 10/303 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
KK RIGTR S LAL ++ H P N ++ +STKGD I +++L GGK
Sbjct: 1 MKKIIRIGTRKSKLALMQTNIVIDAIKKKH--PEINCEVVEMSTKGDEILDKSLLSFGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD- 120
G F E EK + SGEID AVHSAKDMP LL GL+I A RED RDV ++ + +
Sbjct: 59 GAFVSEFEKAIKSGEIDLAVHSAKDMPMDLLTGLKIVAVTKREDPRDVLVTANNKDTIND 118
Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ +IGT+SLRRK + R +++ D RG ++ RL KL + + I+LA AG+KRL
Sbjct: 119 FNKTNKLIGTTSLRRKLQIKRLLNNVDTKDLRGNVQRRLEKLISGEYDGIILAAAGLKRL 178
Query: 180 K---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
E++ L++EDF P+ GQG I +E + I++E+ S+ ER
Sbjct: 179 GLLDDERINLNYLSVEDFIPAGGQGIIAVEGRAEEEFSFLKDS-IHNEEAMYSLEVERYV 237
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ +L+ C I +++ T++ I+ +GK+ + + + + + + I
Sbjct: 238 MKKLNAGCNEPIGAYSFIDKDTIFLD-IIYEHNGKVS-RKKGSDSIENRLKLTEKLVEEI 295
Query: 297 RFI 299
Sbjct: 296 LQE 298
>gi|195014661|ref|XP_001984055.1| GH15218 [Drosophila grimshawi]
gi|193897537|gb|EDV96403.1| GH15218 [Drosophila grimshawi]
Length = 612
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 147/305 (48%), Gaps = 24/305 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 6 KDKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD +
Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTI 123
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SVIGTSSLRR A + R D+ V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 124 ANLPKGSVIGTSSLRRTAQIRRQYPDLIVCDIRGNLNTRLAKLDAKDSKFAGIILAQAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F
Sbjct: 184 VRMGWMARISQVLEPTDLLYAVGQGALAVECRANDNQVLGMLQKLMCLNTTCRILAERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGS-----------------TLYFYGIVLASDGKIFHEVSRN 279
L L G C + +A ++ G L G V + DG I +
Sbjct: 244 LKTLGGGCSAPVAVWSNLNGEPSSINREQLLQQQQQEVGLSLTGAVWSLDGAIEIREHLD 303
Query: 280 GNRCD 284
D
Sbjct: 304 CALND 308
>gi|88607872|ref|YP_505325.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ]
gi|88598935|gb|ABD44405.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ]
Length = 304
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 102/295 (34%), Positives = 160/295 (54%), Gaps = 4/295 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A ++++ + + II + T GD T+ L +IGGKGLF
Sbjct: 7 IRIGTRGSLLAMQQARIVKTAIETNYA--ELSTRIITIKTSGDMNTHVPLYDIGGKGLFI 64
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L+ ID AVHSAKD+P + L I LPR D F+S S+ L L++
Sbjct: 65 KEIEEALLDNIIDVAVHSAKDVPGIYSEDLDIPCILPRASALDAFLSSKYDSIASLPLNA 124
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RRK LL R D+ +I RG +ETR++K+ + I+LA AG+ R+ K+ +I
Sbjct: 125 KIGTSSVRRKVQLLTMRPDLEIIPMRGNVETRISKMQMGECDGIVLAEAGLYRVSKDNLI 184
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L E + GQGAIC++ + + E++K +N ++ +V+ ER+F+ +DGSC
Sbjct: 185 SEVLQPEVMLGAVGQGAICVQCRRYDRRILEILKKLNCHKSYTTVSAERSFMRAVDGSCN 244
Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ +A A L ++ D + R +A + G + ++
Sbjct: 245 TPLAAMAKYIDMDILTMKCMLAD-DARNMVFTERVFAEQNAESAGYEMGTLLKNE 298
>gi|110800724|ref|YP_696126.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124]
gi|169347253|ref|ZP_02866192.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495]
gi|123344731|sp|Q0TQG4|HEM3_CLOP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4239996|dbj|BAA74781.1| hydroxymethylbilane synthase [Clostridium perfringens]
gi|110675371|gb|ABG84358.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124]
gi|169296649|gb|EDS78780.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495]
Length = 291
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + + + T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ K + LY G + + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKIL 288
>gi|254292449|ref|YP_003058472.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814]
gi|254040980|gb|ACT57775.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814]
Length = 323
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 152/300 (50%), Gaps = 7/300 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +IG R SPLA+ A + + ++ I I +T GD++ ++ L + GGK
Sbjct: 17 STQIVKIGARGSPLAVQQAEDFAARFKEIVGN-TVEIEIHTFTTSGDQLLDKRLQDAGGK 75
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLFT E++ +SG ID VHS KD+PT L GLQ+ YLPRED RD DL
Sbjct: 76 GLFTRELDIAQLSGRIDIVVHSLKDVPTVLPDGLQMGCYLPREDPRDALFGKVGNIK-DL 134
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT+SLRR A L R D+ ++ FRG ++TRL KL +A A LLA AG+ RL
Sbjct: 135 PHGATLGTASLRRSAQALALRPDLKIVMFRGNVQTRLRKLEEGQADATLLAAAGLNRLGM 194
Query: 182 EKVIKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+ P+ GQG +C T+ + I+ ++ + ERAFL L
Sbjct: 195 TDKAAGFMPKEEMLPACGQGIVCTTLTNNAEDWIFKACLQIDVLESRIAAIAERAFLKRL 254
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYI 296
DGSC++ IAG + + G VLA DG + + A ++G + + +
Sbjct: 255 DGSCRTPIAGHLSFNETGVDMRGEVLADDGSKRWFSQMSLDTIPDENQAASLGFELGEKV 314
>gi|312127739|ref|YP_003992613.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108]
gi|311777758|gb|ADQ07244.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108]
Length = 290
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 6/294 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG R S L+ + +P+ TKGD ++L + G
Sbjct: 1 MKKLRIGARDSRLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE+ L++ EID AVHS KD+P ++ +I A + RED RDV +S L
Sbjct: 58 VFVKEIERALLTREIDLAVHSLKDLPCEIDSNFEIVAVVEREDPRDVLVSKDGVGFYQLK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + +++AYA +KRL +
Sbjct: 118 PNAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVIVAYAALKRLNLD 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I +I + P PGQGAICIE ++P ++ IN + + ER L L G
Sbjct: 178 SYVSYIFDINEITPCPGQGAICIECLKDSPYK-SILSKINDVNAYIQTQFERLVLKFLGG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C S+I F +Y + +L G + S G++ D +++ ++ +
Sbjct: 237 GCHSSIGVFCKTDQDKIYAFASLLR--GDKLVKASIEGDKADFLSLANKLSKML 288
>gi|327311850|ref|YP_004338747.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20]
gi|326948329|gb|AEA13435.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20]
Length = 303
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 6/300 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L S+ +V P I+ + T GD + +R L IG KG+F
Sbjct: 2 KLRVATRGSKLSLLQTELFIKSIKEVE--PDLEFEIVVVKTTGDLVQDRPLYAIGVKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ G+ D AVHS KD+P+++ + L ++ Y R+ D S + L
Sbjct: 60 EKEVNLAVLRGQADVAVHSLKDLPSEIHEDLVVAGYSKRDSPYDAIASTRGYDVWGLPRG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS+RR A L R D+ + RG ++TR+ K+ + A +LA AG++RL E
Sbjct: 120 ARVGTSSVRRGAFLKSIRPDLHIEPLRGNVDTRIGKVLSGAVDAAVLAEAGVRRLYGENP 179
Query: 185 IKE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
E + ++ PP PGQG + ++ +L++ + ERAFL E+ G
Sbjct: 180 PVEIRRVKPDEIPPPPGQGIVAAVARKDDRGIIDLLRKASDPRAALEARAERAFLKEMGG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C A+ G A + + F + DG V G +G AA+ ++
Sbjct: 240 GCHVAVGGLATATPNGIEFLAGWASVDGSRKVLVKAFG--ESPEEVGVRAARMLKSALGP 297
>gi|312375045|gb|EFR22490.1| hypothetical protein AND_15185 [Anopheles darlingi]
Length = 638
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 34/313 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KK R+G+R S LAL + L ++ P I ++T GDR+ N++L +IG K
Sbjct: 10 KKTIRVGSRKSELALTQTKHVIARLQKLN--PDVVYEIHTMTTVGDRVLNKSLPKIGEKS 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + +
Sbjct: 68 LFTKDLEDALRTGGVDFVVHSLKDLPTALPVGMAIGAVLEREDPRDALVLNERHRGSTLA 127
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGIK 177
L S+IGTSSLRR A L R+ ++V D RG + TRL KL+ + K I+LA AG+
Sbjct: 128 SLPRGSLIGTSSLRRSAQLARYYRHLNVCDIRGNLNTRLAKLDADASKFAGIILAQAGLV 187
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL
Sbjct: 188 RMGWNERIDQVIEPSEILYAVGQGALAVECRSNDEYILGMLAKLCHLETQCRILTERSFL 247
Query: 238 AELDGSCKSAIAGFAYCKGS---------------------------TLYFYGIVLASDG 270
L G C + +A K L G V + DG
Sbjct: 248 RTLGGGCSAPVAVRTELKRQADSDSSNNNNSNVQRKRSSVDTEQGTFQLQVEGAVWSLDG 307
Query: 271 KIFHEVSRNGNRC 283
K S
Sbjct: 308 KTEIRTSGECTLD 320
>gi|168206340|ref|ZP_02632345.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987]
gi|170662220|gb|EDT14903.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987]
Length = 291
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + + + T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNKYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ K + LY G + + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKIL 288
>gi|91773206|ref|YP_565898.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242]
gi|121684353|sp|Q12WM8|HEM3_METBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|91712221|gb|ABE52148.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242]
Length = 309
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 98/301 (32%), Positives = 153/301 (50%), Gaps = 8/301 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA+A A L + H + + T GD T+R L E+ G G+F
Sbjct: 1 MILGTRGSALAIAQADLVTKMLEEK----GHELTRNVIKTSGDVFTDRPLHEVAGVGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ ++I GE+D AVHS KD+PT L I+A L R+ DV ++ +L +L +
Sbjct: 57 RELDDRMIEGEVDIAVHSMKDLPTVRPPELAIAAVLKRDSPYDVLLTADGSTLDELPDGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGT+S+RR+A LLR+R D++V D RG I TR+ KL + ILLA AG++R+ + +
Sbjct: 117 IIGTTSMRRRAQLLRYRPDLNVEDLRGNINTRIQKLKAGQYDGILLAEAGLQRMGWDMDV 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L E F PS QG I + T + +A+ V+NHE + ER + +++G C
Sbjct: 177 -QRLPAEAFCPSANQGTIVVVTR-ADDEAERACSVLNHERSRMETEVERLLITDVEGGCI 234
Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
I FA G ++ VLA DG + + + + + + K
Sbjct: 235 VPIGSFAQMNEDGDEIHVLVEVLAVDGTREIRIEDDIPVKNYREHALSIGRMLVEMGGKE 294
Query: 304 V 304
+
Sbjct: 295 L 295
>gi|294085042|ref|YP_003551802.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664617|gb|ADE39718.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 347
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 108/313 (34%), Positives = 157/313 (50%), Gaps = 20/313 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P + +R S LA+A A R +L P I P +TKGD I +R L E+GGKG+F
Sbjct: 42 PLVLASRASTLAMAQAELVRVALK------PVASRIEPFTTKGDLILDRPLVEVGGKGVF 95
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E+ L++GE D AVHS KDM + G I A LPRED RD + + L L
Sbjct: 96 IKELERSLLAGESDAAVHSMKDMESDFAAGTMIGAVLPREDRRDALVG-SYADLDALPDG 154
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+++GTSS+RR+ALLL R D+ + RG I R+ KLN AI+LA AG+KRLK +
Sbjct: 155 AIVGTSSVRRRALLLHHRPDLRIKLLRGNINKRIAKLNQGDYDAIILAVAGLKRLKLS-L 213
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN----------NPKAQELVKVINHEDTWDSVNCER 234
L+ + P + QGA+ ++ + + + ++ V ER
Sbjct: 214 DYTPLDEKLMPTAAAQGALAVQLCDPSLAQGEKAIRQQAVFDAISPLACVNSTIEVTAER 273
Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
A LA LDGSC + IA A TL G+VL+SDG + ++ +A+ +G
Sbjct: 274 AMLAHLDGSCHTPIAASARFVDDKTLRLDGMVLSSDGSAAFRRTMTASKDEAVALGIKVG 333
Query: 294 QYIRFI-SNKNVF 305
+ +
Sbjct: 334 VALLDDAGGRGFL 346
>gi|195127549|ref|XP_002008231.1| GI11928 [Drosophila mojavensis]
gi|193919840|gb|EDW18707.1| GI11928 [Drosophila mojavensis]
Length = 632
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 147/311 (47%), Gaps = 28/311 (9%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 6 KEKVIRVGSRKSELALIQTKHVVGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + +
Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLREHLKGHTI 123
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA AG+
Sbjct: 124 ASLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKDSKFSGIILAQAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F
Sbjct: 184 VRMGWMNRISQVLEPTDLLYAVGQGALAVECRANDAHVLGMLQRLMCLNTTCRILAERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGS---------------------TLYFYGIVLASDGKIFHE 275
L L G C + +A ++ KG L G V + DG I
Sbjct: 244 LKTLGGGCSAPVAVWSKLKGEPSNISNGNRQQQQQLKQDEEVGLSLTGAVWSLDGAIEIR 303
Query: 276 VSRNGNRCDAI 286
+ ++
Sbjct: 304 EHLDCALNESE 314
>gi|320587748|gb|EFX00223.1| porphobilinogen deaminase [Grosmannia clavigera kw1407]
Length = 342
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 100/329 (30%), Positives = 151/329 (45%), Gaps = 26/329 (7%)
Query: 1 MEKKPFR-IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + +GTR S LAL A ++L + P V+ T GDR L +G
Sbjct: 1 MASQAIIHVGTRSSALALKQAELVVAALEKAN--PHVKFVVDARETAGDRDKVTPLPNLG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116
KGL+T E E +L+ G++D VHSAKDMPT L G + A RED RD I +
Sbjct: 59 -KGLWTTEFETRLVDGDLDLVVHSAKDMPTTLPVGCLLGAIPKREDPRDAVIFPPGSAYK 117
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN---------KAH 167
L DL + S++GTSS+RR A L R + D RG I+TRL KL+ +
Sbjct: 118 VLADLPVGSIVGTSSVRRSAQLRRRFPGLEFRDLRGNIDTRLRKLDAPVPGPDGTTVRYD 177
Query: 168 AILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHED 225
I+LA AG+ R+ I ++L+ + GQGA+ +E + K L++ I +
Sbjct: 178 CIILAAAGLIRMGFNDRISQLLDSASSGTLYAVGQGAMAVEIRNGDAKTLALLEPIIDKP 237
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNG 280
T + ERA + L+G C I + + T L +++ DGKI +
Sbjct: 238 TMLACLAERAVMRALEGGCSVPIGVESAWEAETAASPRLKLQATIVSLDGKIGIDAELTA 297
Query: 281 ---NRCDAINIGRDAAQYIRFISNKNVFN 306
+A +G A+ + + + +
Sbjct: 298 MVTTPQEADALGLKVAEDMIGSGAQKILD 326
>gi|115523326|ref|YP_780237.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisA53]
gi|115517273|gb|ABJ05257.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisA53]
Length = 326
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63
P RIGTR S +ALA + L ++ I+ T GD L GGKG
Sbjct: 4 PVRIGTRKSVMALAQTEDIARRLSAAAS--ELDVEIVKFETVGDSDQVSKLLPHGGKGGA 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLKD-- 120
F EI +I+G+++ +HS KDMP I D D + +L +
Sbjct: 62 FVAEIRAAVIAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPATDALVLRKGLTLDELK 121
Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA------------ 166
IGT+++RR A R ++++I FRG +TR+ KL+N +
Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVNIIHFRGAADTRIRKLDNGEMQRLPGGGEVGPA 181
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A+++A +G++R+ I ++ PS GQG + +E +N+ + ++ + +I+
Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAINDWQIRKYLAMIDDPVA 241
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
S + ER L L+G C S +A F+ GS + VL G +F E SR+G
Sbjct: 242 RLSCDAEREVLWVLNGHCNSPMAAFSTINGSDMTLSASVLDETGGLFIEASRSGPANRPR 301
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GR A + +
Sbjct: 302 ELGRAVALDLLNKGAAAIIE 321
>gi|315047640|ref|XP_003173195.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
gi|311343581|gb|EFR02784.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893]
Length = 342
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 96/327 (29%), Positives = 146/327 (44%), Gaps = 25/327 (7%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
P RIGTR S LA+ A + L + P H I L T GD+ N L G K
Sbjct: 8 NMPLRIGTRRSNLAIVQAKGVQDQLQKI--APDHTFEIEALHTLGDKDQNSALYNFGAKN 65
Query: 63 LFTEEIEKKLISGEIDCAVHSAK-------DMPTKLLKGLQISAYLPREDIRDVFISH-- 113
L+T E+E+ L SG++D VH K DMPT L ++A R+D RD I
Sbjct: 66 LWTTELEELLTSGKLDVIVHCLKGECSKNSDMPTNLPDSCDLAAIPLRDDPRDALIVKAG 125
Query: 114 -TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AIL 170
SL+ L ++IGTSS+RR A L R + + RG +ETRL KL++ ++ I+
Sbjct: 126 LPYTSLQTLPEGAIIGTSSVRRSAQLHRLFPSLRFTNIRGNVETRLAKLDDPQSEYTCIV 185
Query: 171 LAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
++ G++R+ I + L +D + GQGA+ +E + K L+ + +
Sbjct: 186 MSACGLERIGLGYRISQRLGSKDGGILHAIGQGALGLEVRKGDTKILHLLDQLVDHKSSL 245
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGST------LYFYGIVLASDGKIFHEVSRNG-- 280
+ ERA + L+G C I L IV++ DG E S N
Sbjct: 246 ACLAERALMRTLEGGCSVPIGVETEWLDEGEAADPILEMRAIVVSLDGSQCVEDSINAAV 305
Query: 281 -NRCDAINIGRDAAQYIRFISNKNVFN 306
+ +A +G++ A + +
Sbjct: 306 HTKDEATVLGQELAARMLKAGAATILE 332
>gi|9971935|gb|AAG10497.1|AF279106_59 predicted porphobilinogen deaminase [uncultured marine gamma
proteobacterium EBAC31A08]
Length = 303
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 153/302 (50%), Gaps = 6/302 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR S LA+ A L+ KI + ++P++++GD+ T++ L EIGGKGLF
Sbjct: 2 KIRIATRQSELAMYQAKFVADELLA--KINNIKVELVPMTSEGDQ-TDKPLHEIGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E L + E D AVHS KD+P KL +I + RE D+ +S +S + A +
Sbjct: 59 ISTLESSLEADEADIAVHSLKDVPAKLDPKFKIISVFSRESPEDLLLSKDGKSFSEFARN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGTS RRKA + R DI I RG I TR+ KLN+ +++A A IKRL ++
Sbjct: 119 STIGTSGPRRKAQINNLRPDIKTIPVRGNIATRIKKLNDGLFDGLVVAKAAIKRLGLKQN 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E +IE+ PS QG I IE + EL++ I + ER+F+A ++G+C
Sbjct: 179 SYE-FSIEEMLPSASQGYIAIECLSDKKDIIELLENIGDPKELILASAERSFVAAMEGTC 237
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-AINIGRDAAQYIRFISNKN 303
S IA K + G +L+ +G + + D AI+I A K+
Sbjct: 238 LSPIAILCEDKNGQIKISGKILSYEGNEKIYKEKISSFQDIAIDI-MLFADEFILEGAKS 296
Query: 304 VF 305
+
Sbjct: 297 LI 298
>gi|242763889|ref|XP_002340664.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC
10500]
gi|218723860|gb|EED23277.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC
10500]
Length = 335
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 144/320 (45%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LALA + +L + P + I T GDR ++ K
Sbjct: 9 ERKTFNIGTRKSKLALAQTYMVVDALKKEY--PQYEFNIKSKDTAGDRDKITAFKDMQTK 66
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ LI G++D VHS KD+PT L + LPRED RDV I
Sbjct: 67 NLWTEELEELLIGGQLDFIVHSLKDVPTLLPPTCALGGVLPREDPRDVLIVKPGLPYTSL 126
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
++ SV+GTSS+RR A L + V RG I+TRL KL+ I+LA AG+
Sbjct: 127 AEIPAGSVVGTSSIRRTAQLAMKFPHLKVQSLRGNIDTRLAKLDGEDSPYTCIILAAAGL 186
Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R I + L+ + GQGAI IE ++ E++ + + T+ V ER
Sbjct: 187 LRTGMGHRITQYLDSRSGSLLYAVGQGAIGIEVRSDDGLVLEMLNKVGDQKTFKEVLAER 246
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286
+ L ++G C + + + L+ I+++ DGK + A
Sbjct: 247 SLLRTIEGGCSAPLGVESEWINEVEGTTKLHVRSIIVSVDGKRHSTAELEKVIESAAAAE 306
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G + AQ + +
Sbjct: 307 TFGLELAQELIANGAGPILE 326
>gi|296534852|ref|ZP_06897187.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
gi|296264818|gb|EFH11108.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957]
Length = 304
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 111/309 (35%), Positives = 153/309 (49%), Gaps = 14/309 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R G+R SPLAL ++L + +PLST GD R L E+GGKGLF
Sbjct: 1 PLRAGSRASPLALRQTAMVLAAL------GETPCLTVPLSTSGDAEPRRRLAELGGKGLF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL--- 121
+EI + L+ G ID AVHS KD+ T+L GL I+A LPRED RD + A ++
Sbjct: 55 AKEIHEALLDGRIDFAVHSLKDLETELPPGLVIAACLPREDARDALLLAPACPPEERALP 114
Query: 122 ----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ + IGT+S RR A L R D+ RG ++TRL++L A LLA AG+K
Sbjct: 115 LGFLPVGARIGTASARRAAQLRHLRPDLRFGLLRGNVQTRLHRLEQGDFAATLLAMAGLK 174
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL IL+ E+ P+ GQG I I N +E + I+H T + ERA L
Sbjct: 175 RLDLAARASRILSPEEMLPAAGQGVIAITARAGNEALREKLAGIDHAATRLAAAAERALL 234
Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
A L+GSC++ + A L+ G+V DG +G +A IG +
Sbjct: 235 AALEGSCRTPVGAHATLDAEGRLHLTGLVAREDGTFLLRRRLSGPASEAARIGATLGAEL 294
Query: 297 RFISNKNVF 305
R S ++
Sbjct: 295 RADSPADLL 303
>gi|291563543|emb|CBL42359.1| porphobilinogen deaminase [butyrate-producing bacterium SS3/4]
Length = 827
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 16/307 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+++ RIGTR S LAL ++ P ++PL TKGD+I +L GGK
Sbjct: 5 KRRTIRIGTRKSRLALVQTKMVAEAIEA--SCPEAKCELVPLMTKGDKILKTSLVAFGGK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G F EE E+ L++G+ID AVHSAKDMP L GL I A L RED RDVF+ T +
Sbjct: 63 GAFVEEFEQSLLNGDIDLAVHSAKDMPMDLSDGLCIGAVLKREDPRDVFV--TVKGRTPE 120
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+IGT S RR+ ++ D+ RG ++TRL KL + I+LA AG+ RL
Sbjct: 121 RSPRIIGTGSPRRQVQIMEH-GDMECRLLRGNVDTRLEKLYQGEYDGIILAAAGLNRLGL 179
Query: 182 EKVI---KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
E L E F P+ GQG I +E + +++K +N ++ ++ ER L
Sbjct: 180 FNDPRFSFEFLEPEMFLPAGGQGIIAVEAK-KGSEVLKILKKLNDKEAERALFAERKVLR 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L C +A+ +A + T + + +G +G +++ + A+ +
Sbjct: 239 LLGAGCTAAVGVYAKEENGTFWMGLMRETKNG--LIRRKISGAPENSMKL----AELLVK 292
Query: 299 IS-NKNV 304
++
Sbjct: 293 QGTAGDI 299
>gi|18310417|ref|NP_562351.1| porphobilinogen deaminase [Clostridium perfringens str. 13]
gi|168216823|ref|ZP_02642448.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239]
gi|25453024|sp|Q8XKG4|HEM3_CLOPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|18145097|dbj|BAB81141.1| hydroxymethylbilane synthase [Clostridium perfringens str. 13]
gi|182381001|gb|EDT78480.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239]
Length = 291
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + + T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLK---GKENVDSKKLLVMTEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I ++ K + LY G + + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKILEE 290
>gi|168214449|ref|ZP_02640074.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969]
gi|170714079|gb|EDT26261.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969]
Length = 291
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 6/292 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
I TR S LA + L + + + + T+GDR + +L +IGGKGLF
Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L +
Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSS+RR L +R D+ ++ RG I+TR+ K+ I+LA AG+KRL E+VI
Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNIQTRIKKITEENLDGIILAAAGLKRLGMEEVI 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C
Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S I ++ K + LY G + + GN+ D I +G+ A+ I
Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKIL 288
>gi|119174394|ref|XP_001239558.1| hypothetical protein CIMG_09179 [Coccidioides immitis RS]
Length = 331
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LAL R++L P + GD L K
Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQAA--FPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV +
Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPSACVLAAVMKRENPRDVLVLKKGLPSMTL 122
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL+ + ++LA AG+
Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R +E I + L+ + + GQG + IE ++ ++++ I T + ER
Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYTCLAER 242
Query: 235 AFLAELDGSCKSAIAGFA-YCKGST----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
+ L L+G C + + + + L IV + DGK E+ +GN A
Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGNVQSDEAAE 302
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G++ A + +
Sbjct: 303 TFGKEVALKLVARGAGKILE 322
>gi|195376491|ref|XP_002047030.1| GJ12153 [Drosophila virilis]
gi|194154188|gb|EDW69372.1| GJ12153 [Drosophila virilis]
Length = 618
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 25/308 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K
Sbjct: 6 KEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + +
Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTI 123
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
SVIGTSSLRR A + R + V D RG + TRL KL+ +K I+LA AG+
Sbjct: 124 ATLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKESKFAGIILAQAGL 183
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F
Sbjct: 184 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDAHVLTMLQKLMCLNTTCRILAERSF 243
Query: 237 LAELDGSCKSAIAGFAYCKGS------------------TLYFYGIVLASDGKIFHEVSR 278
L L G C + +A ++ KG L G V + DG I
Sbjct: 244 LKTLGGGCSAPVAVWSNLKGEPSSINANNRQQQQQLEEVGLSLTGAVWSLDGAIEIREHL 303
Query: 279 NGNRCDAI 286
+ ++
Sbjct: 304 DCALNESE 311
>gi|13627125|sp|Q49808|HEM3_MYCLE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 315
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + G +D AVHS KD+PT ++A PR D RD ++ L +L S
Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S A +G A +
Sbjct: 236 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|15828303|ref|NP_302566.1| porphobilinogen deaminase [Mycobacterium leprae TN]
gi|221230780|ref|YP_002504196.1| porphobilinogen deaminase [Mycobacterium leprae Br4923]
gi|13093996|emb|CAC31937.1| porphobilinogen deaminase [Mycobacterium leprae]
gi|219933887|emb|CAR72519.1| porphobilinogen deaminase [Mycobacterium leprae Br4923]
Length = 318
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT
Sbjct: 5 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + G +D AVHS KD+PT ++A PR D RD ++ L +L S
Sbjct: 59 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + +
Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 179 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 238
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S A +G A +
Sbjct: 239 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 298
Query: 297 RFISNKNV 304
+ + +
Sbjct: 299 FELGAREL 306
>gi|39934577|ref|NP_946853.1| porphobilinogen deaminase [Rhodopseudomonas palustris CGA009]
gi|39648426|emb|CAE26947.1| putative porphobilinogen deaminase [Rhodopseudomonas palustris
CGA009]
Length = 327
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 140/324 (43%), Gaps = 20/324 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K P RIGTR S +ALA + L + II T GD L GG
Sbjct: 1 MVKFPVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGG 58
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSL 118
KG F EI ++ GE+ CA+HS KDMP I A D D + +L
Sbjct: 59 KGGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTL 118
Query: 119 KD----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163
++ IGT+++RR A R ++ VI FRG ++R+ KL+N
Sbjct: 119 EELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSE 178
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I+
Sbjct: 179 VGPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALID 238
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ + + ER L L+G C S IA + G + VL +G +F E +R G
Sbjct: 239 NHQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPA 298
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+GR + V
Sbjct: 299 NRPRELGRTVGLELLDKGAAAVIE 322
>gi|85374658|ref|YP_458720.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594]
gi|84787741|gb|ABC63923.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594]
Length = 292
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 105/288 (36%), Positives = 154/288 (53%), Gaps = 4/288 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD+I +R L EIGGK L+T+E++ L G
Sbjct: 1 MAQAVETRNRLCAAHGWDEEAVELVPVVASGDKIQDRPLAEIGGKALWTKELDAWLGEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T + L I+A LPRED RDV + A ++D+ + +GTS+ RR A
Sbjct: 61 IDAAVHSMKDVETFRPEALHIAAILPREDKRDVLV--GAAGIEDIPKGAKVGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+L R D+ V+ FRG + TRL KL +A LLA AG+KRL E I L ++++ P
Sbjct: 119 QMLSLRPDVEVVTFRGNVATRLGKLEAGEADVTLLAAAGLKRLG-ELDIGSPLELDEWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QGAI IE ++ A+ L+ I+H + + ERA LA L+G+C S IA A G
Sbjct: 178 AAAQGAIGIECRADDAGARALLSPIDHAPSRAEIMAERALLAGLNGTCHSPIAVLAEAMG 237
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ L + + DG D I A + ++ +
Sbjct: 238 NRLSIRATLYSPDGTDKVAGEGELALADYAAI-ERLAADLLDRASPAI 284
>gi|239607866|gb|EEQ84853.1| porphobilinogen deaminase [Ajellomyces dermatitidis ER-3]
Length = 347
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV +
Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTL 134
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+
Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 195 LRTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + L IV + DGK E+ ++ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKQVADELVTLGAGRIL 333
>gi|91978235|ref|YP_570894.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB5]
gi|91684691|gb|ABE40993.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB5]
Length = 330
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 20/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63
P RIGTR S +ALA + L ++ I+ T GD L GGKG
Sbjct: 8 PVRIGTRKSVMALAQTEDIAKQLRAAAS--ELDVEIVKFETVGDSDQISKLLPHGGKGGA 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLKD-- 120
F EI +I+G++ A+HS KDMP + D D + +L++
Sbjct: 66 FVAEIRAAVIAGQLQAAMHSLKDMPGNEDTPGLVIGATLARDPATDALVLREGLTLEELK 125
Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166
IGT+++RR A R +++VI FRG +TR+ KL+ A
Sbjct: 126 KSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRIRKLDAREKQRLPDGGEVGPA 185
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A+++A AG++R+ I ++ PS GQG + +E V++ + + + +I+ +
Sbjct: 186 DALIMARAGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVDDWQTRRYLAMIDDPKS 245
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
+ ER L L+G C S +A + G+ + + VL +G +F E +R+G
Sbjct: 246 RLCCDAEREVLWVLNGHCNSPMAAHSTVNGAEMTLHASVLDEEGGLFIETTRSGPANRPR 305
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GR + V
Sbjct: 306 ELGRAVGLDLLDKGAAAVIE 325
>gi|261198286|ref|XP_002625545.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081]
gi|239595508|gb|EEQ78089.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081]
Length = 347
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV +
Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMAL 134
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+
Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 195 LRTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + L IV + DGK E+ ++ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKQVADELVTLGAGRIL 333
>gi|299132980|ref|ZP_07026175.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
gi|298593117|gb|EFI53317.1| porphobilinogen deaminase [Afipia sp. 1NLS2]
Length = 325
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 22/324 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S +A+A E L V + I+ T GD L+ GG
Sbjct: 1 MASDRLRIGTRKSAMAIAQTEEIARRLKAV----GTEVEIVKFETMGDIDQAGKLSPHGG 56
Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG F +I + +++G + A+HS KD+P + GL I A L R+ DV + S+
Sbjct: 57 KGGAFVAQIREAVLNGRLHAAMHSLKDVPGNEDTPGLVIGAALSRDPPGDVLVLRPGTSV 116
Query: 119 KD----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163
+ IGT+S+RR A + R +I VI FRG ++R+ KL+
Sbjct: 117 DELKRTRGKGFEIGTNSVRRAAYVRRLFPEIEVIHFRGAADSRVRKLDQRAKQKLPDGGA 176
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
A A+++A +G++R+ + I +I + P+ GQG + +E + + + ++ I+
Sbjct: 177 VGPADALIMARSGLERVGLKSRIAYEFSIAEMLPAVGQGIVAVECAARDFETRYILSAID 236
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ ER L L+G C S IAGFA G+ + VL G E SR G
Sbjct: 237 DASAHACADAEREVLWVLNGHCNSPIAGFAEIMGTEMQLAASVLDHAGSRIIEASRVGCA 296
Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306
+GR + +
Sbjct: 297 SRPRELGRAVGMELLARGAAEIIE 320
>gi|157964647|ref|YP_001499471.1| porphobilinogen deaminase [Rickettsia massiliae MTU5]
gi|189028151|sp|A8F1Y8|HEM3_RICM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157844423|gb|ABV84924.1| Porphobilinogen deaminase [Rickettsia massiliae MTU5]
Length = 351
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 99/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG
Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCKIVPIITSGDLIQNKPLYDIGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++
Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+
Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177
Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ P GQG I +E ++ ++ INH T++ + ERAFL
Sbjct: 178 AFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLKICNQINHLPTFELIKPERAFLEY 237
Query: 240 LDGSCKSAIAGFAYCKG 256
LD +C++ IA ++
Sbjct: 238 LDANCRTPIAAYSQYLD 254
>gi|332981813|ref|YP_004463254.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON]
gi|332699491|gb|AEE96432.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON]
Length = 292
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 103/286 (36%), Positives = 152/286 (53%), Gaps = 4/286 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
R+G+R S LALA S+L ++ P + + T+GDR+ + + IG KG
Sbjct: 1 MNKIRVGSRGSRLALAQTDAVISALRSLY--PDIDFERQIVKTEGDRLQHIPVERIGDKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F ++IE+ L+ G ID AVHS KD+P++L GL I A RED RD FIS ++++ L
Sbjct: 59 IFVKDIEQALMDGHIDMAVHSMKDVPSQLPDGLMIGAMPWREDPRDAFISSDGRTIEQLG 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ IG S RR A L I ++ RG I+TR+NK+N I+LA AG+KRL
Sbjct: 119 CRARIGIGSARRSAQLKNCFPGIDIVAIRGNIDTRINKINEAGLDGIVLAVAGLKRLGVS 178
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
VI +IL ++ P+ GQGA+ IE ++ KA +L+ +NH T +V+ ER F+A + G
Sbjct: 179 DVITQILPVDVCTPAAGQGALGIEIRKSDEKAADLLMPLNHAPTRAAVDAERMFMAMMGG 238
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
C + I + G + V DG S G N+
Sbjct: 239 DCNTPIGVYGEVDGVDILLRAAV-EKDG-CIMRHSVKGEVAQYQNV 282
>gi|311895732|dbj|BAJ28140.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 323
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 102/314 (32%), Positives = 159/314 (50%), Gaps = 16/314 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR SPLALA ++L + +P +P++T+ D L ++GGKGL
Sbjct: 9 RTLRIGTRSSPLALAQTDMVVAALRE--HVPDLVAETVPVTTEADLWQG-DLAQLGGKGL 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
+T++I+ L +G +D AVH KD+P L +GL +AY+ R D+RDV + +
Sbjct: 66 YTKQIDAMLQAGAVDMAVHCVKDVPGDVPLPRGLVFAAYMERPDVRDVLLFPEGSGYRTL 125
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-----KAHAILLAY 173
DL +VI +S++RRKA +LR R D+ V+ RG + +RL KL+ A ++LA
Sbjct: 126 ADLPPGAVILSSAVRRKAQILRARPDLEVVRVRGAVGSRLEKLDGAKQIDVHADGMVLAA 185
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ RL E +L++++ P+ G G + +E +P L++ INH T V E
Sbjct: 186 AGLARLGIE-RPGYVLSMDEMLPAVGAGVLGLECRQGDPATAALLEKINHPRTQREVTAE 244
Query: 234 RAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRD 291
R L L G C S IAG+ + L G+V +G F +R D +G
Sbjct: 245 RVLLHNLRGHCNSPIAGYCTTEPDGQLSLRGMVFDREGSKFANAMLWNEHRQDPATLGAR 304
Query: 292 AAQYIRFISNKNVF 305
A + + +
Sbjct: 305 VAAELLRQGAREII 318
>gi|89889812|ref|ZP_01201323.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7]
gi|89518085|gb|EAS20741.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7]
Length = 317
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 19/317 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LA+ A +S L + + P+ ++GD + L E+G
Sbjct: 1 MSLK-IRIGTRDSQLAMWQATTVQSQLNAL----GFQTELAPVKSQGDLNLDEPLYEMGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT+ ++ L+ G+ID AVHS KD+PT+L KG+ +A L R +D+ + ++ + +
Sbjct: 56 TGIFTKTLDVALVKGDIDIAVHSLKDVPTQLPKGMVQAAVLERASQKDILVYKSSFNPDE 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179
I T SLRRKA L + V+D RG + TRL+KL++N +A + A AG+ R+
Sbjct: 116 A---MTIATGSLRRKAQWLNMYAQHHVVDLRGNVNTRLSKLHSNKDWNAAIFAKAGLDRI 172
Query: 180 K-----KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
+ E +++ F P+P QGAI I +N E V +NH T V+ ER
Sbjct: 173 GLLSQLRGNYGFEYSDLDSFVPAPAQGAIMIAAMGHNTAVLEAVSQLNHAQTQRCVDIER 232
Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA-INIGRDAA 293
FL EL+G C + I A + + F G +L+ DG +V N + +++G A
Sbjct: 233 RFLRELEGGCTAPIGAIAQVHDNKIDFTGCLLSIDGTERIDVKDQINLTETDVDLGLAFA 292
Query: 294 ----QYIRFISNKNVFN 306
+ + K +
Sbjct: 293 KAQSEKVFAKGGKAMME 309
>gi|467039|gb|AAA17223.1| hem3b [Mycobacterium leprae]
Length = 315
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 15/308 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT
Sbjct: 2 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + G +D AVHS KD+PT ++A PR D RD ++ L +L S
Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ R + +
Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARPGRLDEV 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C
Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235
Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + A L G V A DG S A +G A +
Sbjct: 236 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 295
Query: 297 RFISNKNV 304
+ + +
Sbjct: 296 FELGAREL 303
>gi|303314269|ref|XP_003067143.1| porphobilinogen deaminase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106811|gb|EER24998.1| porphobilinogen deaminase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037407|gb|EFW19344.1| porphobilinogen deaminase [Coccidioides posadasii str. Silveira]
Length = 331
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F IGTR S LAL R++L P + GD L K
Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQAA--FPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV +
Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPTACVLAAVMKRENPRDVLVLKKGLPSMTL 122
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL+ + ++LA AG+
Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R +E I + L+ + + GQG + IE ++ ++++ I T + ER
Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYACLAER 242
Query: 235 AFLAELDGSCKSAIAGFA-YCKGST----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
+ L L+G C + + + + L IV + DGK E+ +G+ A
Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGDVQSDEAAE 302
Query: 287 NIGRDAAQYIRFISNKNVF 305
G++ A + +
Sbjct: 303 TFGKEVALKLVARGAGKIL 321
>gi|327355808|gb|EGE84665.1| porphobilinogen deaminase [Ajellomyces dermatitidis ATCC 18188]
Length = 347
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 144/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV +
Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTL 134
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+
Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L + + GQG + IE ++ +++V+ I + T + ER
Sbjct: 195 LRTGQGDRITYYLGSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + L IV + DGK E+ ++ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKQVADELVTLGAGRIL 333
>gi|312793378|ref|YP_004026301.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180518|gb|ADQ40688.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 290
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 104/294 (35%), Positives = 150/294 (51%), Gaps = 6/294 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K RIG R S L+ + +P+ TKGD ++L E G
Sbjct: 1 MKKLRIGARDSRLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKEFKSPG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L
Sbjct: 58 VFVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGLGFYQLK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ IGTSSLRR+ L R DI VI+ RG IETRL+K+ + I+LAYA +KRLK +
Sbjct: 118 SNAKIGTSSLRREVHLKNLREDIQVINIRGNIETRLSKIQSEGLDGIVLAYAALKRLKLD 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ I +I + P PGQGAICIE ++P ++ IN D + ER L L G
Sbjct: 178 SYVSYIFDINEITPCPGQGAICIECLKDSPYK-SILSKINDADAYIQTQFERLVLKFLGG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C S+I F + +Y + +L G + S GN+ D +++ ++ +
Sbjct: 237 GCHSSIGVFCKTDQNKIYAFASLLR--GDKLVKASIEGNKDDFLSLANKLSKML 288
>gi|189220198|ref|YP_001940838.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4]
gi|189187056|gb|ACD84241.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4]
Length = 298
Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 108/300 (36%), Positives = 155/300 (51%), Gaps = 5/300 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP IG+R S LAL A SL + P +I I + T GD + + + +I +G
Sbjct: 1 MKPLIIGSRGSRLALIQAQLIVDSLKKEY--PLLDIQIRVIKTTGDHLEAQPIRDIDQRG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+FT+EIE KL+ GEID AVHS KD+ +L L I+A PRED RD +IS L
Sbjct: 59 IFTKEIENKLLEGEIDLAVHSLKDLQVELHPRLVIAAIPPREDPRDCWISLQHPHPSSLQ 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLKK 181
+++ T S RR LLR R D+ ++ RG +E+RL KL N + +LA AGIKRL
Sbjct: 119 AGAIVVTGSPRRANQLLRKRPDLRIVPVRGNVESRLRKLRENRQWQGTVLALAGIKRLGI 178
Query: 182 EKVIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + + P+PGQGA+ ++ + + Q LVK +N T +V ER FL E
Sbjct: 179 DISSFFCTPLSMDWMLPAPGQGALALQARIEDKHTQSLVKHLNDFSTACAVTAERVFLHE 238
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L G C++A+ A +GS L GI E G A ++G+ A ++ +
Sbjct: 239 LGGGCRTAVGARAEVEGSRLVLEGIWWPQQAIEPKEGKVVGEIHRAEDLGKKLADLLKNL 298
>gi|316935323|ref|YP_004110305.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1]
gi|315603037|gb|ADU45572.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1]
Length = 326
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 139/323 (43%), Gaps = 20/323 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K P RIGTR S +ALA + L + II T GD L GGK
Sbjct: 1 MKFPVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGGK 58
Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLK 119
G F EI ++ GE+ CA+HS KDMP I A D D + +L+
Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLE 118
Query: 120 D----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN----------- 164
D IGT+++RR A R ++ VI FRG ++R+ KL+N
Sbjct: 119 DLKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNGEKQRMPDGSEV 178
Query: 165 -KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++
Sbjct: 179 GPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDN 238
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ + ER L L+G C S IA + G + VL +G +F E R G
Sbjct: 239 HQSRLCCDAEREVLWVLNGHCNSPIAAHSIITGDEMTLRASVLDLEGGMFIEAVRTGPAN 298
Query: 284 DAINIGRDAAQYIRFISNKNVFN 306
+GRD + V
Sbjct: 299 RPRELGRDVGLELLDKGAAAVIE 321
>gi|307826350|ref|ZP_07656554.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732591|gb|EFO03464.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 321
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 87/241 (36%), Positives = 130/241 (53%), Gaps = 2/241 (0%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K RI TR SPLAL A L P ++ ++T+GD+I + L +IGGK
Sbjct: 7 TEKIIRIATRRSPLALWQAEHVAERLER--TFPGCRTELVKMTTQGDKILDAPLAKIGGK 64
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
GLF +E+E+ ++ G D AVHS KD+P + +GL ++A L RED D F+S+ +L DL
Sbjct: 65 GLFVKELEQGMLEGLADIAVHSMKDVPVEFPEGLHLAAILIREDPTDAFVSNHYATLHDL 124
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ IGTSSLRR+ + + ++ RG + TRL+KL++ + AI+LA AG+KRL
Sbjct: 125 PANARIGTSSLRRQCQIKELYPEAEILSLRGNVNTRLSKLDSGEYDAIILASAGLKRLGM 184
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ I + L+ P+ GQGAI IE + A I +W A +
Sbjct: 185 AERITQCLDTSVSLPAIGQGAIGIECRIALLVAGAGAFYIADYASWKVAYFVMATAMSVG 244
Query: 242 G 242
Sbjct: 245 L 245
>gi|312200104|ref|YP_004020165.1| porphobilinogen deaminase [Frankia sp. EuI1c]
gi|311231440|gb|ADP84295.1| porphobilinogen deaminase [Frankia sp. EuI1c]
Length = 380
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 93/338 (27%), Positives = 150/338 (44%), Gaps = 46/338 (13%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LALA + L + ++ + T+GDR ++++G G++
Sbjct: 40 LRLGTRRSALALAQSGMVADELRTRL---GIEVDLVHVVTEGDRNRAE-ISQLGSTGVWV 95
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + L+SGE+D AVHS KD+PT +G+ ++A PRED+RDV +S T ++L L +
Sbjct: 96 SALREALLSGEVDLAVHSLKDLPTAPPEGITLAAIPPREDVRDVLVSPTGRTLAQLGPGA 155
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT + RR A L + V+ RG ++TR+ K + + A++LA AG+ RL + I
Sbjct: 156 RIGTGAPRRAAQLRALGLGLDVVPIRGNVDTRIKKAIDGEVDAVVLARAGLARLDRLDAI 215
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-------------------------- 219
E+L E P+PGQGA+ IE L+
Sbjct: 216 TELLEPEVMLPAPGQGALAIECVATTLAPLTLLTVGTPEDQGAVTGMSCPVAPGSGVEIP 275
Query: 220 -------VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC---------KGSTLYFYG 263
V++ + +V ERAFLA ++ C + + A +
Sbjct: 276 LERLLRFVLDDAPSSVAVRAERAFLAAIEAGCTAPVGALAQVLPARGQAPASEGEVRLRA 335
Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
+V + DG G+ D +GR A +
Sbjct: 336 VVASLDGTTVLRRELGGSTADPEALGRRLADDLLSAGA 373
>gi|238499723|ref|XP_002381096.1| hydroxymethylbilane synthase, putative [Aspergillus flavus
NRRL3357]
gi|220692849|gb|EED49195.1| hydroxymethylbilane synthase, putative [Aspergillus flavus
NRRL3357]
Length = 337
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 101/310 (32%), Positives = 149/310 (48%), Gaps = 17/310 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+K F +GTR S LAL+ S+L V+ P + I T GD T E K
Sbjct: 16 SRKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTK 73
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV +
Sbjct: 74 NLWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSL 133
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
DL SV+GTSS+RR A L + VID RG I TRL KL+ I+LA AG+
Sbjct: 134 SDLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGL 193
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER
Sbjct: 194 LRLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAER 253
Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AI 286
+ L L+G C + + L IV++ DGK EV +G+ A
Sbjct: 254 SLLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGSVDSVEAAE 313
Query: 287 NIGRDAAQYI 296
+ G A+ +
Sbjct: 314 DFGVTVAKEL 323
>gi|213406619|ref|XP_002174081.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275]
gi|212002128|gb|EEB07788.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275]
Length = 335
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 94/315 (29%), Positives = 149/315 (47%), Gaps = 18/315 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---KGLF 64
+G+R S LAL L +++ P +N I+ T GD I N+ L E K L+
Sbjct: 13 LGSRKSKLALIQTNLVLKQLKELY--PEYNFPILSRDTVGDEIINKALFEFKTQMAKSLW 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L+ GE VHS KD+PT L +G+ I+ R D + +S+ +L
Sbjct: 71 TRELEVLLMHGECRMLVHSLKDLPTDLPEGMTIACITRRSCPLDAVVMRAGSPYKSVSEL 130
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
+SV+GTSS+RR+A+L R + D RG + TRL KL+ ++ ++LA AG+ RL
Sbjct: 131 PPNSVVGTSSIRRRAMLQRHFPHLKFRDIRGNVGTRLAKLDAPDSPFDCLILAAAGLIRL 190
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L + GQGA+ +E ++ + EL+K + +T S ERA +
Sbjct: 191 NLKDRITQMLQAPFVFYAVGQGALAVEVRADDTEIIELLKPLQDMETTYSCLAERALMKR 250
Query: 240 LDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRD 291
L G C I C ++ G+V++SDG S + DA +G +
Sbjct: 251 LQGGCAIPIGVETQCLPLSKDKYSVVLQGMVVSSDGTRSAYASEFMEVSSEKDAEQLGMN 310
Query: 292 AAQYIRFISNKNVFN 306
A + +
Sbjct: 311 VATALLKRGAGAILE 325
>gi|223939088|ref|ZP_03630972.1| porphobilinogen deaminase [bacterium Ellin514]
gi|223892248|gb|EEF58725.1| porphobilinogen deaminase [bacterium Ellin514]
Length = 332
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 105/332 (31%), Positives = 160/332 (48%), Gaps = 40/332 (12%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG- 60
KP I TR S LALA A S P +I + + T GD++ +L + G
Sbjct: 5 NNKPIFIATRGSALALAQANAVLSQCRSA--FPKLDIELKIIKTTGDKLQKASLAKEGES 62
Query: 61 --KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS- 117
KGLFT+E+E L++G+ D AVHS KD+PT+L GL + A R D+RDV + A+
Sbjct: 63 LPKGLFTKELEVALLNGDADIAVHSLKDLPTELPTGLILGAVSKRADVRDVLVYRDAEYL 122
Query: 118 -----------------LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
+KD + + TSS RRKA LL R D++V++ RG + TRL K
Sbjct: 123 RSQPGKSNRRGFTPKLAIKDFPPGATVATSSTRRKAQLLAQRGDLNVVEIRGNVATRLEK 182
Query: 161 L-NNNKAHAILLAYAGIKRLKK--------------EKVIKEILNIEDFPPSPGQGAICI 205
L N + A +LA AG++RL E ++ IL+ + P GQ A+ +
Sbjct: 183 LANQPELDATVLAAAGLERLNFKITAEGKLAGEGIPEGLLATILDFDVMLPCVGQAALGM 242
Query: 206 ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265
E N+ + QE+ +NH +T V ER+FL+ + G C+S +A +A G L
Sbjct: 243 EIRENDARIQEICDRLNHPETHACVLAERSFLSGMGGGCQSPVAAYAEIAGDQLQMRAAS 302
Query: 266 LASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ +A+ +G++ A ++
Sbjct: 303 FRE--TSARRAVGGKSINEAVALGQELAAKLK 332
>gi|297180020|gb|ADI16245.1| porphobilinogen deaminase [uncultured bacterium HF0010_16H03]
Length = 301
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 3/301 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI TR SPLAL A + + + + + +IP+S++GD T++ L ++GGKGLF
Sbjct: 2 KIRIATRKSPLALFQAEYVANQIKQLDQ--KIKVELIPMSSEGDL-TDKPLHQVGGKGLF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ +E L++ D AVHS KD+P L K +I + R D+ ++ S K +
Sbjct: 59 IKTLESALLNDSADIAVHSLKDVPANLEKNFKIISVCKRAAASDILLTKKGTSFKSMPEG 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S+IGTSS RRKA + R D+S I RG I TR+NKL+ N +++A A ++RL
Sbjct: 119 SIIGTSSPRRKAQIKILRPDLSTISVRGNIATRINKLHKNHFDGLIIAKAAMERLNLPFK 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ ++ P+ QG I IE +N +++ IN E ER+F+A+L+GSC
Sbjct: 179 NTYEFSYQEMLPAATQGFIGIECIASNKDLIKMLGSINSEKDMILAEAERSFVAQLNGSC 238
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
S IA + + + + L+ +G + + A+ +
Sbjct: 239 LSPIAIYCREESNQILISAKALSQNGDKQIFKEIISSHASINEDIKSLAKEFISKGADKL 298
Query: 305 F 305
Sbjct: 299 I 299
>gi|304393221|ref|ZP_07375149.1| porphobilinogen deaminase [Ahrensia sp. R2A130]
gi|303294228|gb|EFL88600.1| porphobilinogen deaminase [Ahrensia sp. R2A130]
Length = 324
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 85/317 (26%), Positives = 134/317 (42%), Gaps = 20/317 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTE 66
I TR S +ALA A L + +P ++ + + +GDR L GGKG F
Sbjct: 6 IATRKSKMALAQANHVADLLREA--VPGLDVDLAENNPRGDRDQISKLDRHGGKGGAFVA 63
Query: 67 EIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISH----TAQSLKDL 121
EI +++G A+HS KDMP + GL I AYL R+D D + Q +
Sbjct: 64 EIRADIVAGRSQVAMHSLKDMPGNEETPGLVIGAYLTRDDPTDSLVLRDGITMDQMRETQ 123
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA------------HAI 169
+GT+S+RR A L + +I FRG ++R+ KL+ I
Sbjct: 124 GDGLKLGTNSVRRAAFLRNLFPNAEIIHFRGAADSRIEKLDKGLMQQLVDGGEVGPADGI 183
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
LLA +G+ R+ I + P+ GQG + +E ++ + +E + I+ +
Sbjct: 184 LLATSGMARVGVSDRISHTFTTSEMLPAVGQGIVAVECGSSDWQTREWLARIDDANARAC 243
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ER L LDG C S IA + +G T+ V+ DG + +G +G
Sbjct: 244 AEAEREVLWVLDGHCNSPIAAHSVIEGDTMTMESAVMEIDGDKIIRHTASGPAEYPRELG 303
Query: 290 RDAAQYIRFISNKNVFN 306
R + + +
Sbjct: 304 RTVGLALVAKGAQAIIE 320
>gi|322389389|ref|ZP_08062943.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903]
gi|321143877|gb|EFX39301.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903]
Length = 307
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 84/304 (27%), Positives = 151/304 (49%), Gaps = 10/304 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++GTR S LA+ L + H P + ++P T+GDR+ + +L IGGKG
Sbjct: 1 MRSIKVGTRKSQLAMTQTKMVVERLKECH--PEVDFELVPYKTQGDRLVHVSLQTIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
+F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I
Sbjct: 59 VFVKEIEQALLNKDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIFREEGMTLATL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+
Sbjct: 119 PQGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGY 178
Query: 182 EKVIK----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
E L+ + F P+ QGA+ +E ++ + E++ I+ ++ + + ER+FL
Sbjct: 179 LDQSPSLNLEFLDPQTFIPAVSQGALAVECREDDEEVLEILASIHDKEVENCIQLERSFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ ++ C + A + ++ + + + + + D + + +
Sbjct: 239 SLMNADCTFPVGAHAQYIDGHYHLETMLADAKDRCLYVALTSKDGSDLPKLAL---EQLM 295
Query: 298 FISN 301
Sbjct: 296 EKGA 299
>gi|145592441|ref|YP_001154443.1| porphobilinogen deaminase [Pyrobaculum arsenaticum DSM 13514]
gi|158514284|sp|A4WN24|HEM3_PYRAR RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|145284209|gb|ABP51791.1| hydroxymethylbilane synthase [Pyrobaculum arsenaticum DSM 13514]
Length = 297
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 8/295 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ TR S L++ E + + V P I + T GD + ++ L +IG KG+F
Sbjct: 3 LVVATRGSKLSMLQTEELLAQIKAVE--PSIEFEIKIVKTTGDEVQDKPLYQIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ ++ GE D AVHS KD+P++L GL ++ + R D +S L+ L +
Sbjct: 61 KEVNLAVLRGEADVAVHSLKDLPSELSPGLVLAGFSKRAPPFDAVVSTAGYVLETLPRGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
++GTSS+RR + R D+ V RG ++TR+NK+ K A ++A AGI RL
Sbjct: 121 LVGTSSVRRAEFVKAIRPDVRVEPLRGNVDTRINKILQGKYDAAIMAVAGIYRLYGASPP 180
Query: 186 KE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ +L E PP PGQG + + +L+K + ER FL +
Sbjct: 181 IKLAVLRPEVLPPPPGQGIVAAVVREADSWLIDLLKKASDPKASLEAIAEREFLKAVGAG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C AI G A+ + T+ F + G + V G+ D + +GR AA+ IR
Sbjct: 241 CHVAIGGVAFARNDTVEFIAGYAS--GGRKYIVRVVGD--DPVEVGRRAAEEIRK 291
>gi|302523839|ref|ZP_07276181.1| porphobilinogen deaminase [Streptomyces sp. AA4]
gi|302432734|gb|EFL04550.1| porphobilinogen deaminase [Streptomyces sp. AA4]
Length = 315
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 91/309 (29%), Positives = 146/309 (47%), Gaps = 22/309 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RIGTR S LALA ++ + I+ ++T GD ++ +++IG
Sbjct: 1 MT-RVIRIGTRGSKLALAQTGIVADTIRAT----GAEVEIVTVTTPGDL-SSAPISQIG- 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT + + L+ EID AVHS KD+PT GL ++A PRED RD I+ +L +
Sbjct: 54 VGVFTSALREALLRNEIDVAVHSYKDLPTAPEAGLVLAAVPPREDPRDALIARDGLTLGE 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+
Sbjct: 114 LPPGAKVGTGAARRMAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVG 173
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I E L+ P+P QGA+ +E + L ++ E T +V ERA LA
Sbjct: 174 RVDEITETLDPIQMLPAPAQGALALECRAADVDIEHLLASAVDDETTRVAVTAERALLAA 233
Query: 240 LDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKI----FHEVSRNGNRCDAI 286
L+ C + + A + G A +G+ S +A
Sbjct: 234 LEAGCSAPVGALAEIVEDLDDEGAVVERISLRGT-AAVEGENGGVDMVRASAIAGIGEAE 292
Query: 287 NIGRDAAQY 295
+GR+ A
Sbjct: 293 KLGRELAAE 301
>gi|297563292|ref|YP_003682266.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847740|gb|ADH69760.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 335
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 93/307 (30%), Positives = 149/307 (48%), Gaps = 13/307 (4%)
Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66
R+GTR S +A + + ++ I + +++ GD +T LT++GG G+F
Sbjct: 22 RLGTRRSTMATSQSRMVADAITART---GRVIELELITSFGD-VTKAHLTQLGGTGVFVN 77
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
+ +L +G +D AVHS KD+PT +GL ++A R+D RD + DL +
Sbjct: 78 ALRDELHAGTVDFAVHSLKDLPTTPAEGLVLAAIPERDDPRDALCARDGLKFADLPAGAR 137
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
IGT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ + + +
Sbjct: 138 IGTGSPRRVAQLAALRPDLVYVPIRGNAETRLGKVASGELDAVVLAYAGLGRVGRTEDVT 197
Query: 187 EILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+ E P+PGQGA+ +E V + ++H T V ER L+EL+ C
Sbjct: 198 EVFEPEQMLPAPGQGALAVECSVERLDGDLAYLASVDHPATRAEVVAERTVLSELEAGCA 257
Query: 246 SAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN------GNRCDAINIGRDAAQYIR 297
+ + +A T L V+A+DG R G+ A +GRD A+ +
Sbjct: 258 APVGAYAQYDAETGRLRLRAAVVATDGAEAVRRERAADLASPGDLAAATALGRDLARQMI 317
Query: 298 FISNKNV 304
+
Sbjct: 318 AEGADRI 324
>gi|313637685|gb|EFS03063.1| porphobilinogen deaminase [Listeria seeligeri FSL S4-171]
Length = 274
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 5/270 (1%)
Query: 39 VIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQIS 98
I + TKGDRI + TL+++GGKGLF E+E+ L G ID AVHS KD+P+ + +GL I
Sbjct: 1 EIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIG 60
Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
A RE D F+ +T +S DL +VIGTSSLRR A +LR R D + RG I+TRL
Sbjct: 61 AIPKRESALDCFVFNTVESFHDLPTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRL 120
Query: 159 NKLNNNKAHAILLAYAGIKRLKK---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
KL++ AI+LA AG+ R+ + E ++ E P+ GQGA+ IE N+ +
Sbjct: 121 QKLHDENFDAIILAKAGLSRMGWLENTTLKLEDISPELCLPAVGQGALAIECRENDKQIC 180
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
+++ I+HE+T V ER FL +L+G C+ IAGFA + F G+V +DG
Sbjct: 181 DMLASIHHEETGICVEAERVFLKKLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILS 240
Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G + + IG A+ + +
Sbjct: 241 AENIG--ENPMTIGNQVAEALLSEGADTII 268
>gi|312888384|ref|ZP_07747960.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603]
gi|311299218|gb|EFQ76311.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603]
Length = 526
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 10/263 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IGTR S LAL A ++ L + + + T+GDRI N + ++ G
Sbjct: 1 MFDRKLIIGTRGSELALWQANFVKNKLAEN----GIQADLKIIKTQGDRILNLSFDKLEG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQ 116
KG FT+E+E++L++G ID AVHS KD+PT+ GL I+A RED ++ +
Sbjct: 57 KGFFTKELEEELLAGTIDLAVHSHKDLPTENPPGLTIAAVSEREDPAELLLVLKDCVDVH 116
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
+ ++GTSS RRKA LL R D+ + + RG + TR+NKL N AI++A AG+
Sbjct: 117 QKLSVKYGGIVGTSSNRRKAQLLAVRPDLEIDELRGNVPTRINKLRNEDYDAIMIAKAGV 176
Query: 177 KRLKKEK--VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
RL + E + + P+P QG + I+ + + E ++++NH D + + ER
Sbjct: 177 VRLGLDMSEFHVEEIPPTELIPAPAQGVLAIQVREADTELFEALQILNHPDVAEELAVER 236
Query: 235 AFLAELDGSCKSAIAGFAYCKGS 257
+ L G C + + + +
Sbjct: 237 SLLKLFGGGCHLPLGCYCRKRDN 259
>gi|86751126|ref|YP_487622.1| porphobilinogen deaminase [Rhodopseudomonas palustris HaA2]
gi|86574154|gb|ABD08711.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris HaA2]
Length = 326
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 87/320 (27%), Positives = 137/320 (42%), Gaps = 20/320 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63
P RIGTR S +ALA + + L + I+ T GD L GGKG
Sbjct: 4 PVRIGTRKSVMALAQTEDIANQLRAAAS--ELDPEIVRFETVGDSDQVSKLLPHGGKGGA 61
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLKD-- 120
F EI ++ GE+ CA+HS KDMP I A D D + +L +
Sbjct: 62 FVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPANDSMVLRKGLTLDELK 121
Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166
IGT+++RR A R ++ VI FRG +TR+ KL+N A
Sbjct: 122 ASRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADTRIRKLDNREKQRMPDGGEVGPA 181
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
A+++A +G++R+ I ++ P+ GQG + +E V+ + ++ + +I+
Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPAAGQGIVAVECPVHEWQTRKYLALIDDPKA 241
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
+ ER L L+G C S +A ++ GS + VL G +F E +R G
Sbjct: 242 RLFCDAEREVLWVLNGHCNSPMAAYSTINGSEMTLSASVLDEAGGLFIEATRTGPANRPR 301
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+GR + +
Sbjct: 302 ELGRTVGLDLLDKGAAAIIE 321
>gi|332519549|ref|ZP_08396016.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4]
gi|332045397|gb|EGI81590.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4]
Length = 527
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 7/306 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RIGTR S LAL A +S L + H V++P+ + GD + ++ L E+G
Sbjct: 1 MS-KTIRIGTRDSELALYQANAVKSQLEHL----GHKTVLVPVKSTGDIVLDKPLYELGI 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FT ++ +++G+ID AVHS KD+PT L KG+ +A L R ++RD + T +
Sbjct: 56 TGIFTRTLDIAMLNGDIDIAVHSLKDVPTLLPKGIVQAAVLKRGNVRDTLVYKTTEEFL- 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
A +VI TSSLRRKA L ++ D RG + TRL KL N + +A +
Sbjct: 115 GAREAVIATSSLRRKAQWLNRYPTHTIEDIRGNVNTRLEKLK-NTSRFNAAIFAAAGIGR 173
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +N+E P+P QGAI + + + + ++ INHE+T ER FL +L
Sbjct: 174 LGLRPETAVNLEWMIPAPAQGAIMVTALEEDEETRAILAEINHEETQICTQIEREFLNKL 233
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
+G C + I Y K + F G++L+ +G V R + +I A Y+
Sbjct: 234 EGGCTAPIGALCYIKDEEVNFEGVLLSPNGTKKITVQRVKKLGEHTDIATWCADYVIDKG 293
Query: 301 NKNVFN 306
K++ +
Sbjct: 294 GKHLMD 299
>gi|218509456|ref|ZP_03507334.1| porphobilinogen deaminase [Rhizobium etli Brasil 5]
Length = 279
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 131/224 (58%), Positives = 163/224 (72%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG
Sbjct: 54 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 113
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D
Sbjct: 114 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 173
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL
Sbjct: 174 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 233
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N
Sbjct: 234 KVEVLTDILDPDTFPPAPAQGAICIESRIGDTRIDDLLAAVNDA 277
>gi|332531340|ref|ZP_08407248.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624]
gi|332039204|gb|EGI75622.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624]
Length = 323
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 107/315 (33%), Positives = 157/315 (49%), Gaps = 24/315 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M I TR S LAL A + L H + ++ ++T+GD+I +R L+++GG
Sbjct: 1 MSMN-LTIATRESRLALWQAEHVQGLLRQQ----GHAVTLLGMTTQGDQILDRALSKVGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L G D AVHS KD+P +L +G ++A L RED RD ++S L D
Sbjct: 56 KGLFVKELEVALDEGRADLAVHSLKDVPMELPEGFVLAAVLEREDERDAWVSPHCAGLAD 115
Query: 121 LALHSVIGTSSLR-----RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L +++GTSSLR R+AL R D+ + RG ++TRL KL+ + HAI+LA AG
Sbjct: 116 LPSGAIVGTSSLRRVVLLREALRALGRDDVRIEPLRGNLDTRLRKLDEGQYHAIVLAAAG 175
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVN 231
+KRL I++I E+ P+ GQGA+ IE + + + H+ TW V
Sbjct: 176 LKRLGLAARIRKIFTPEEMLPAAGQGALGIEIKHGATAQTAALEQALSNLAHQPTWLRVA 235
Query: 232 CERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGK-IFHEVSRNGNR-- 282
ERA + GSC +A A KG+TL G+ +
Sbjct: 236 AERAVSRAMGGSCSMPLAAHAAFVSSPAPKGATLRLRAAWGDVQGRLPLVQAQDEAAVHG 295
Query: 283 -CDAINIGRDAAQYI 296
DA +G A+ +
Sbjct: 296 LDDAEALGLRVARQL 310
>gi|85710451|ref|ZP_01041515.1| porphobilinogen deaminase [Erythrobacter sp. NAP1]
gi|85687629|gb|EAQ27634.1| porphobilinogen deaminase [Erythrobacter sp. NAP1]
Length = 292
Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats.
Identities = 97/288 (33%), Positives = 149/288 (51%), Gaps = 4/288 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A AFETR L H + ++P+ GD++ +R L EIGGK L+T+E++ L G+
Sbjct: 1 MAQAFETRERLCKAHGWAEGEVELVPVVASGDKVLDRPLAEIGGKALWTKELDAWLAEGK 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHSAKD+ T + +A+LPR D RD + A S+ D+ + +GTS+ RR +
Sbjct: 61 IDVAVHSAKDVETIRPDAFRFAAFLPRADRRDALV--GAASIADIPRGATVGTSAPRRAS 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D V+ FRG + TRL KL +A LA AG++RL + +V L D+ P
Sbjct: 119 QLLNLRPDCKVVTFRGNVATRLGKLEAGEADVTFLAAAGLERLGQSEVGA-PLETGDWIP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+ QG I +E ++ +A EL+ I+H T + ERA LA+L G+C S +A
Sbjct: 178 AAAQGVIALECRADDDEAGELLAAIDHAATRAELEAERALLAKLGGTCHSPVAVLCSGDA 237
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
L + + DG + + + D + A + + +
Sbjct: 238 GELTMRAALFSPDGSERVDGEASFSAGDHAPV-HALAADLLHRATPAI 284
>gi|56552799|ref|YP_163638.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753474|ref|YP_003226367.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|56544373|gb|AAV90527.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552837|gb|ACV75783.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 308
Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats.
Identities = 107/300 (35%), Positives = 154/300 (51%), Gaps = 7/300 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+
Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I + + L
Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIGIPSLEV--LPYS 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GT+S RR A + R R DI + RG I+TRL KL N + A LLA AG+ RL + V
Sbjct: 122 GCVGTASPRRAAQIRRIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ + ++ P+ GQGAI IE + A E V +I+H T +V ER L L+ C
Sbjct: 182 GYD-VPLDQMLPAAGQGAIGIEAL-ADSAAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
S IA FA + + +GK S + + + + S V
Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGK--FSASIDKEISQPSD-AFEVGSLLLNQSPPEV 296
>gi|72163131|ref|YP_290788.1| porphobilinogen deaminase [Thermobifida fusca YX]
gi|123747085|sp|Q47LA7|HEM3_THEFY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71916863|gb|AAZ56765.1| hydroxymethylbilane synthase [Thermobifida fusca YX]
Length = 320
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 13/313 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P R+GTR S +A + L +P + ++ +++ GD IT LT++GG
Sbjct: 1 MSTTPARLGTRRSTMATNQSRRVAEILTARTGVP---VELVLITSFGD-ITRAHLTQLGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L++GE++ AVHS KD+PT +G+ ++A R+D RD + D
Sbjct: 57 TGVFVSALRDALLAGEVEFAVHSLKDLPTAPTEGIVLAAVTERDDPRDALCARDGLKFAD 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+
Sbjct: 117 LPPGATVGTGSPRRVAQLAALRPDLRYVPIRGNAETRLGKVASGELDAVVLAYAGLHRVG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHV-NNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + ++ +++ P+PGQGA+ +E + + ++H T +V ER LAE
Sbjct: 177 RLDDVTDVFDVDQVLPAPGQGALAVECRTADFTGPLRYLTAVDHLPTRAAVTAERVILAE 236
Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-------AINIGRD 291
L+ C + + +A L V+A+DG + + A +GR
Sbjct: 237 LEAGCAAPVGAYAEFVAEDRLRLRAAVVATDGSQAVRAEQTVTVTEFPDAVQAATALGRQ 296
Query: 292 AAQYIRFISNKNV 304
A + +
Sbjct: 297 LAHDMIEQGADQI 309
>gi|307244624|ref|ZP_07526728.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM
17678]
gi|306492005|gb|EFM64054.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM
17678]
Length = 310
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 142/304 (46%), Gaps = 12/304 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+GTR S LALA S ++D K P I + TKGD+I +++L +IG KGLF
Sbjct: 2 KLIVGTRGSALALAQTDSIISLVLD--KFPDLEIEKKIIKTKGDKILDKSLDKIGDKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS------- 117
EIE++L+ G ID AVHS KDMPTK+ GL+++ R+D RDV + +
Sbjct: 60 VSEIERELLEGTIDFAVHSLKDMPTKISPGLKLAQTPERQDPRDVLVINPKHQLRPEDIM 119
Query: 118 -LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
+ IGT S RR + L R I + RG I TRL KL + AI+LA AGI
Sbjct: 120 DWLRSSQGLKIGTGSKRRTSQLKRINESIQPMMIRGNIGTRLEKLVSQDLDAIVLAAAGI 179
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + + + E+ P+ GQGA+ IE N+ + + + + ER F
Sbjct: 180 NRLGMDGLNLYHFSYEEMIPACGQGALAIEVRSNDENTDRIFDFLADDQACMEIEAERTF 239
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQ 294
L ++G C + G+ G+ D + A +G+D A
Sbjct: 240 LEVINGGCHVPVGATVKKVGNKWVLMGMYGREDCSSIVYGQLDFEPSLGGAKKVGQDLAS 299
Query: 295 YIRF 298
Y+
Sbjct: 300 YLIK 303
>gi|192290090|ref|YP_001990695.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1]
gi|192283839|gb|ACF00220.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1]
Length = 326
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 139/323 (43%), Gaps = 20/323 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K P RIGTR S +ALA + L + II T GD L GGK
Sbjct: 1 MKFPVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGGK 58
Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLK 119
G F EI ++ GE+ CA+HS KDMP I A D D + +L+
Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLE 118
Query: 120 D----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------ 163
+ IGT+++RR A R ++ VI FRG ++R+ KL+N
Sbjct: 119 ELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSEV 178
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++
Sbjct: 179 GPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDN 238
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+ + ER L L+G C S IA + G + VL +G +F E +R G
Sbjct: 239 HQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPAN 298
Query: 284 DAINIGRDAAQYIRFISNKNVFN 306
+GR + V
Sbjct: 299 RPRELGRTVGLELLDKGAAAVIE 321
>gi|261402865|ref|YP_003247089.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7]
gi|261369858|gb|ACX72607.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7]
Length = 295
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 148/300 (49%), Gaps = 14/300 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LAL A + L ++ + + II T GD+I N+ L+EIG G+FT
Sbjct: 2 LRIGTRGSKLALYQANKVAELLKNL----GYEVEIIIKKTTGDKILNKKLSEIGI-GVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ L++ EID AVHS KD+PT + L I A L R+ D+ I + L +L
Sbjct: 57 KELDLALMNNEIDIAVHSFKDVPTIWNENLMIGAVLERDSYYDLIIWDKNKDL-ELDKEI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR++ L ++ RG ++TRL KL + AI+L+ AGI RL +
Sbjct: 116 TVGTSSIRRRSFLKAMYPNVKFKLLRGNVDTRLKKLKEGQYDAIVLSEAGIIRLNIDLSD 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ PSP QG I + ++ K +++++ INH+ T+ CER L E G C
Sbjct: 176 FNYRRLDIT-PSPAQGVIAVACRRDDNKIKKILERINHKKTFLECLCERTALNEFGGGCS 234
Query: 246 SAIAGFAYCKGST--LYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRDAAQYIRFI 299
+ L V +GK N D AI +G+ + ++ +
Sbjct: 235 VPFGALSIYDEDKKILTLKATVF-LNGKLKHASGKINCEIDDLDSAITLGKTIGKRLKDL 293
>gi|291528492|emb|CBK94078.1| porphobilinogen deaminase [Eubacterium rectale M104/1]
Length = 338
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 141/309 (45%), Gaps = 41/309 (13%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL L + P + + + T GD + L +IG KG+F +E
Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI
Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--------------------- 166
GT S RRK LL+ R D+ V+ RG I+TRL KL + +
Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEIADNTVNNNEIANEKQN 182
Query: 167 -------HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
I+LA AGIKR+ ++ I + + +D P+P QG + +E +N + +
Sbjct: 183 KYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAELMAKLD 242
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268
++ E T ER FL + G+C +A + K + L + +
Sbjct: 243 ALSDEKTNLCAGIEREFLKRIGGNCHLPVAAYCDIVSEKDCGNDSDKNNRLKLLAMFGSE 302
Query: 269 DGKIFHEVS 277
DGK
Sbjct: 303 DGKKLARTE 311
>gi|291525403|emb|CBK90990.1| porphobilinogen deaminase [Eubacterium rectale DSM 17629]
Length = 338
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL L + P + + + T GD + L +IG KG+F +E
Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI
Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--------------------- 166
GT S RRK LL+ R D+ V+ RG I+TRL KL + +
Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEKQN 182
Query: 167 -------HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K +
Sbjct: 183 KYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAKLD 242
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268
++ E T ER FL ++ G+C +A + K + L + +
Sbjct: 243 ALSDEKTNLCAGIEREFLKQIGGNCHLPVAAYCDIVSEKDRGNDSNKNNRLKLLAMFGSE 302
Query: 269 DGKIFHEVS 277
DGK
Sbjct: 303 DGKQLARTE 311
>gi|301102795|ref|XP_002900484.1| porphobilinogen deaminase [Phytophthora infestans T30-4]
gi|262101747|gb|EEY59799.1| porphobilinogen deaminase [Phytophthora infestans T30-4]
Length = 361
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 99/304 (32%), Positives = 155/304 (50%), Gaps = 12/304 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG-- 60
K+ + +R S LA+A + L + + P V+ T GD++ +R L+++G
Sbjct: 13 KRTIFVSSRKSQLAMAQTNTVIAMLEE--RFPDLQFVVGQEDTVGDQVLDRHLSDLGTTT 70
Query: 61 -KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114
GLFT+ +E+ L++ AVHS KDMPT L GL ++A RE D + H
Sbjct: 71 ASGLFTKSLEEALLAKAASFAVHSLKDMPTTLPDGLVLAAITKRESPEDAAVIHPKHKEK 130
Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLA 172
++L++L SVIGTSSLRR+ALL + RG I+TRL KL+ ++ AI++A
Sbjct: 131 GIKTLQELPEGSVIGTSSLRREALLRSQFPTFEIKTVRGNIQTRLAKLDEHDDYDAIIVA 190
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G +R + I EIL ++ F GQG+I +E ++ + E++K I E +
Sbjct: 191 ACGFRRGELGDRIDEILPMDTFGYGVGQGSIGVECRADDEETIEMLKTITDEKSAQLCKA 250
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
ER+ L L+G C+ A+ A TL VL+ DGK + +G R +G+
Sbjct: 251 ERSLLYHLEGGCQIAMGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQL 310
Query: 293 AQYI 296
A+
Sbjct: 311 AERF 314
>gi|221126431|ref|XP_002156062.1| PREDICTED: similar to hydroxymethylbilane synthase, partial [Hydra
magnipapillata]
Length = 418
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 100/339 (29%), Positives = 156/339 (46%), Gaps = 37/339 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
EK +G+R S LA+ ++L K +I + T GD+I + L +IG K
Sbjct: 27 EKTSVVVGSRKSQLAVIQTKSIVAALCQKEK--DVECIIETMDTLGDKILHIALPKIGEK 84
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
LFT+++E L +D VHS KD+PT L +G+ IS R+D RD I H + K
Sbjct: 85 SLFTKDLELALSEKRVDFLVHSLKDLPTTLPQGMAISTIYKRDDPRDCIIFHPKHNGKKL 144
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177
DL +S+IGTSSLRR A L R + ++ RG + TRL KL AI+LA AG+
Sbjct: 145 ADLPENSIIGTSSLRRVAQLKRKYNKLTFQSVRGNLNTRLQKLEEESLYDAIVLAKAGVD 204
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + I +IL+ ++ + GQGAI +E ++ ++ + +T + ER F+
Sbjct: 205 RMGWTEKIGQILSEDECLYAIGQGAITVEVRNDDKYTISILAQLTDMETLLACVAERCFM 264
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-------------- 283
L+G C + IA + G+ GIVL +DG F + + +
Sbjct: 265 RTLNGGCSTPIACHSQFSGNNYSLRGIVLNADGSRFLDSTVSTTLQVNILTDQNEPPSYT 324
Query: 284 -----------------DAINIGRDAAQYIRFISNKNVF 305
A G + A ++ + +V
Sbjct: 325 VSKSGVVINSLYINEFIKAEKCGEELAYCLKKLGADDVL 363
>gi|302695979|ref|XP_003037668.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8]
gi|300111365|gb|EFJ02766.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8]
Length = 358
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 25/331 (7%)
Query: 1 MEK---KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLT 56
M + F + +R SP+A A + +++L + P +ST GD+ + L
Sbjct: 1 MSSPQPRTFVLASRKSPMAQAQTVQVQAALRALDTSPSAPKFETSFMSTAGDKNQVQALY 60
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113
+GGK L+T ++E L D VHS KD+PT L +G ++ R++ DV
Sbjct: 61 FLGGKELWTGDLEVALKERAADMLVHSLKDVPTVLPEGFVLAGISERDEPVDVMCVKAGM 120
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILL 171
++ ++L SV+GTSS+RR A+L R + +D RG I TRL KL++ A++
Sbjct: 121 PWRTPEELPEGSVVGTSSVRRIAMLKRRFPHLKFLDVRGNIATRLAKLDDPALPYAALIA 180
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ + I L + + GQGA+ IE ++ +A L K I H +
Sbjct: 181 AKAGLVRVNLQHRITCDLAPPTYSYAVGQGALGIEVRADDTEALALCKRITHWPSLWRCR 240
Query: 232 CERAFLAELDGSCKSAIAGF-------------AYCKGSTLYFYGIVLASDGKIFHEVSR 278
ERA L EL+G C + A + L V + DG +
Sbjct: 241 AERACLRELEGGCSVPVGVVSAIEIENEGEGEEAVGRAGVLSLTAGVTSVDGTEHVQHEI 300
Query: 279 NG---NRCDAINIGRDAAQYIRFISNKNVFN 306
+ +A +G A+ ++ + +
Sbjct: 301 REHVRSVEEAEALGVRMAKTLKQNGAQKILE 331
>gi|317026261|ref|XP_001389286.2| porphobilinogen deaminase [Aspergillus niger CBS 513.88]
Length = 329
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 98/331 (29%), Positives = 140/331 (42%), Gaps = 41/331 (12%)
Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54
M + R+GTR S LAL A L H P + +GD +
Sbjct: 1 MSQNTTTTVQELRLGTRNSKLALVQAEHVSKELTSAH--PGVQFPWQTVVVRGDADKSSP 58
Query: 55 LTEIGG-----KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+ G K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D
Sbjct: 59 FLKFAGPSDAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDA 118
Query: 110 FISH-----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN- 163
+ L L SV+GTSS RRKALL + V + RG + TRL KL++
Sbjct: 119 LVIKEGLRSQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDP 178
Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I
Sbjct: 179 EGPFSAIILATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIE 238
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHE 275
T ER+ L L G C S +A + + L V
Sbjct: 239 DLVTRRICLAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDAEV---------- 288
Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G DA +G AQ + + +
Sbjct: 289 ----GTDEDAEALGATVAQQLLKNGGQALLE 315
>gi|289193013|ref|YP_003458954.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22]
gi|288939463|gb|ADC70218.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22]
Length = 292
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 12/298 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IGTR S LAL A + L ++ +++ I + T GDR+ ++ L++IG G+FT
Sbjct: 2 ITIGTRGSKLALYQANKVAELLKNL----GYDVKIKIIKTTGDRVLDKKLSDIGI-GVFT 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + D
Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNK-DVDFDENSKI 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR+A L + RG ++TRL KL N AI+L+ AGI RL
Sbjct: 116 VIGTSSLRRRAFLKFLYPNAKFELLRGNVDTRLRKLKENLYDAIVLSEAGIIRLGINLDD 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ P+P QG I + ++ + ++++K INHE T+ CERA L E G C
Sbjct: 176 FNYKRLNIL-PAPAQGIIAVACKRDDEEMKDILKEINHEKTYLESLCERAALNEFGGGCS 234
Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298
A L V+ +D + AI +G+ ++
Sbjct: 235 VPFGALAVYDEKNEILKLDAGVVINDELKSASGEIKCKIDEIDKAIELGKKIGMKLKN 292
>gi|238923292|ref|YP_002936807.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656]
gi|238874966|gb|ACR74673.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656]
Length = 338
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LAL L + P + + + T GD + L +IG KG+F +E
Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI
Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--------------------- 166
GT S RRK LL+ R D+ V+ RG I+TRL KL + +
Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEKKN 182
Query: 167 -------HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K +
Sbjct: 183 KYSEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAKLD 242
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268
++ E T ER FL ++ G+C +A + K + L + +
Sbjct: 243 ALSDEKTNLCAGIEREFLKQIGGNCHLPVAAYCDIVSEKDRGNDSNKNNRLKLLAMFGSE 302
Query: 269 DGKIFHEVS 277
DGK
Sbjct: 303 DGKQLARTE 311
>gi|296282337|ref|ZP_06860335.1| porphobilinogen deaminase [Citromicrobium bathyomarinum JL354]
Length = 292
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 4/288 (1%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD++ +R L ++GGK L+T E++ L G
Sbjct: 1 MAQAHETRARLCAAHGWDESAVELVPVVAGGDKVQDRPLADVGGKALWTRELDAWLDEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T + + ++A LPR D RDV + A SL+ + + +GTS+ RR A
Sbjct: 61 IDAAVHSLKDVETIRPEWITLAAILPRADRRDVLL--GASSLRSIPQGATLGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
+ R DI + FRG + TR+ KL +A LLA AG++RL +E V L +E + P
Sbjct: 119 QMKNLRPDIETVLFRGNVATRMAKLQAGEADVTLLAAAGLERLGQESVGT-PLPLETWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+P QGAI IE + + + +N T V ERA L L GSC S +
Sbjct: 178 APSQGAIGIECRTEDSVTRGHLDALNDAPTRREVEAERALLEALGGSCHSPVGVLVENAD 237
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
L+ + ++DG + S + D I R A + + +
Sbjct: 238 EGLHMRAALFSADGAERVDGSSDLTPGDDEAI-RAFAADLLARATPGI 284
>gi|257054363|ref|YP_003132195.1| porphobilinogen deaminase [Saccharomonospora viridis DSM 43017]
gi|256584235|gb|ACU95368.1| hydroxymethylbilane synthase [Saccharomonospora viridis DSM 43017]
Length = 316
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 153/316 (48%), Gaps = 19/316 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ RIGTR S LA++ L + + ++P+ST GDR ++ + EIG
Sbjct: 5 SSRTLRIGTRASNLAMSQTRTIAKMLEEA----GQKVELVPVSTPGDR-SSAPIAEIG-V 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT + + L++ E+D AVHS KD+PT G+ ++A RED RDV IS +L +L
Sbjct: 59 GVFTSALREALLANEVDVAVHSYKDLPTAPQPGIVLAAVSKREDPRDVLISRDGLTLGEL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+ +GT S RR L + ++ RG I+TR+ K+ + + AI+LA AG+ R+ K
Sbjct: 119 PPGAKVGTGSPRRMTQLRALGLGLEIVPIRGNIDTRIAKVTSGELDAIVLAKAGLTRVGK 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+I E+++ P+P QGA+ +ET + L +++HE T +V ERA LA L
Sbjct: 179 LDLITEVIDPMQILPAPAQGALAVETRVDDVDTEHLLRSIVDHEATRVAVAAERAVLATL 238
Query: 241 DGSCKSAIAGFAYCKGS---------TLYFYGIVLAS---DGKIFHEVSRNGNRCDAINI 288
C + + A L G+ + D S ++ +A +
Sbjct: 239 QAGCSAPVGALAEVVEDLDSEGAVVERLSLRGVAATATEGDSVQILRASGVADKHEADRL 298
Query: 289 GRDAAQYIRFISNKNV 304
GR A + + +
Sbjct: 299 GRTVASELLDLGAGAL 314
>gi|325960061|ref|YP_004291527.1| porphobilinogen deaminase [Methanobacterium sp. AL-21]
gi|325331493|gb|ADZ10555.1| Porphobilinogen deaminase [Methanobacterium sp. AL-21]
Length = 290
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR S LA + L V I + + + GD+I N L I KG+FT
Sbjct: 1 MKVGTRGSSLATYQTKTIINELSIVT---DEKIDVEIIKSTGDKIQNSQLYNIDAKGIFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ ++ G +D AVHS KD+PT+L L+I A RE +V +S +L +
Sbjct: 58 RELDDAVLDGTVDFAVHSLKDLPTELEGDLEIVAVPERESPNEVLVSKLG--WDELPKGA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR+A + ++ RG I+TR+ K+ + + A ++A AG+ RL + I
Sbjct: 116 TVGTSSIRREAFCNHHDKEFNIKPIRGNIDTRIKKVFSGEYDATIMAEAGLNRLGLTEYI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
K+ +IE F P+ GQGAI + ++ +L + INH ++ V E+ L E+ C+
Sbjct: 176 KQRFSIEYFTPAAGQGAIAVVARSDSDVKDDL-QKINHLKSFQEVTAEKRVLLEMGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S + A + L ++L +GKI V G+ A N+G AA+ +
Sbjct: 235 SPLGVSARINENKLKLCAVLLTQEGKIVSRVMVEGSADKASNLGLKAAKLMMED 288
>gi|326428753|gb|EGD74323.1| uroporphyrinogen decarboxylase [Salpingoeca sp. ATCC 50818]
Length = 737
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 94/337 (27%), Positives = 152/337 (45%), Gaps = 36/337 (10%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ + IGTR S LAL A L+ + P H I + T GD+ L + G G
Sbjct: 374 QRVYTIGTRGSVLALWQAHYVLDRLVKKY--PTHRFRIKVVDTAGDKDLTTALDKFGTTG 431
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
+FT+ +E+ L+SGE+DC VHS KD+P+ L +++A R D RD + + + +
Sbjct: 432 VFTDALERALVSGEVDCVVHSLKDVPSTLHPSTRLAAISERHDPRDCVVFNPRHNGRYSS 491
Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175
DL SV+GTSS RR+A L R ++ RG ++TRL KL++ N A++LA AG
Sbjct: 492 IADLPPGSVLGTSSARRRAFLARAYPSLTFKHVRGNVKTRLRKLDDPANGYDALVLASAG 551
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL------------------ 217
++RL E + E L+++ P + GQ A+ ++ +
Sbjct: 552 LERLNMEARVGEKLSVDVVPHAVGQAALGVQVRCSAKPGPHGGEGGDDDDDDGDKDAAVL 611
Query: 218 ----VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGK 271
+ +T + ER FL L G C IA + T + G V + DGK
Sbjct: 612 AEMLHASVQCNETALVCSAERGFLRSLGGGCSLPIAVRSQRDADTGRIVLCGNVCSVDGK 671
Query: 272 IFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVF 305
+ + +A +G A ++ + +
Sbjct: 672 TLASRTCDAVVTTEAEAAALGEKVAADLKADGGEAIL 708
>gi|300782413|ref|YP_003762704.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32]
gi|299791927|gb|ADJ42302.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32]
Length = 309
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 21/310 (6%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LAL +L + I+ ++T GD+ + IG G+FT +
Sbjct: 2 GTRGSKLALTQTGTVADALRAT----GVEVEIVKVTTPGDKSL-APIATIG-VGVFTSAL 55
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ L+ E+D VHS KD+PT G+ ++A PRED RD I+ +L +L S +G
Sbjct: 56 REALLRNEVDVIVHSYKDLPTAPEPGITLAAVPPREDPRDALIARDGLTLGELPPGSTVG 115
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
T + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + I E
Sbjct: 116 TGAARRTAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGLVEAITET 175
Query: 189 LNIEDFPPSPGQGAICIETHV-NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
L+ P+P QGA+ +E + L ++ E T +V ERA LA L+ C +
Sbjct: 176 LDPIQMLPAPAQGALAVECRSADVDLEHLLRSTLDDEGTRAAVTAERALLAALEAGCSAP 235
Query: 248 IAGFAYCKGS---------TLYFYGIVLASDGKI----FHEVSRNGNRCDAINIGRDAAQ 294
+ A + G A +G+ ++ A +G+D A
Sbjct: 236 VGALAEIVEDLDAEGKVVERISLRGT-AAIEGEEGAVDMVRAIALADKDQAAQLGKDLAA 294
Query: 295 YIRFISNKNV 304
+ + +
Sbjct: 295 ELLDLGAGAL 304
>gi|225389494|ref|ZP_03759218.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme
DSM 15981]
gi|225044437|gb|EEG54683.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme
DSM 15981]
Length = 301
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 19/306 (6%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RIGTR S LA+ +SL + P + + T GD+I N+ L E GGK
Sbjct: 1 MDNTIRIGTRNSRLAMIQTEMVAASLREA--APGIQVSLEARMTTGDKILNKPLQEFGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F E E+ ++ G +D AVHSAKDMP +L +GL I RED RDV ++ + +
Sbjct: 59 GVFVSEFEEGILEGRLDLAVHSAKDMPMELAEGLSIVGVPMREDPRDVLVTAAGRPVPKT 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSD------ISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
VIGTSS RRK + ++ + + RG ++TRL KL + H I+LA AG
Sbjct: 119 G-EIVIGTSSPRRKLQIELLGTNLWPGGSVRCENLRGNVQTRLGKLESGMYHGIILAAAG 177
Query: 176 IKRLK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
+KRL + + L E F P+ GQG + +E +A ++ I+H +TW +N
Sbjct: 178 LKRLGLLEDPRYNFQFLECESFVPAGGQGILAVEGRAEG-RAAGILSGISHRETWLCLNL 236
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGR 290
ER L LD C I ++ + L V G+ +++ G +A + R
Sbjct: 237 ERQVLKLLDAGCHEPIGVYSRLEDGLL----EVFGISGRNGRVYKIHLKGQPEEAGELAR 292
Query: 291 DAAQYI 296
AA+ +
Sbjct: 293 RAAEGL 298
>gi|329903547|ref|ZP_08273542.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480]
gi|327548285|gb|EGF32978.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480]
Length = 280
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 96/263 (36%), Positives = 145/263 (55%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T+GD+I +RTL+++GGKGLF +E+E + G D AVHS KD+P +L G ++A+L
Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEVAIAEGRADLAVHSLKDVPMELPDGFMLAAFLE 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD F+S+ SL+ L +V+GTSSLRR+AL+ + + RG ++TRL KL+
Sbjct: 61 REDPRDAFVSNEYASLEALPAGAVVGTSSLRRQALIAARFPHLVIRPLRGNLDTRLGKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ AI+LA AG+KRL + I+ L E P+PGQGA+ IE L+ ++
Sbjct: 121 RGEYAAIILAAAGLKRLGVPERIRMALEPEHSLPAPGQGAMAIEIKAGRTDLAALLAPLD 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
H T +V ER GSC+ +A FA G L+ +V DG G
Sbjct: 181 HLATARAVQAERTLSRAFGGSCQIPLAAFAVVDGDQLHLRAMVATPDGVRVASAEARGPA 240
Query: 283 CDAINIGRDAAQYIRFISNKNVF 305
+ +G+ A +R + +
Sbjct: 241 DNPEAVGQQVADALRGQDAEIIL 263
>gi|212529280|ref|XP_002144797.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC
18224]
gi|210074195|gb|EEA28282.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC
18224]
Length = 336
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 100/320 (31%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K F+IGTR S LALA +L + P ++ I T GDR ++ K
Sbjct: 10 ERKCFKIGTRKSKLALAQTDLVVEALKKKY--PQYDFNIETKDTAGDRDKITAFKDMTSK 67
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+TEE+E+ LI G+ID VHS KD+PT L + LPRED RDV I SL
Sbjct: 68 NLWTEELEELLIGGQIDFIVHSLKDVPTILPPTCALGGVLPREDPRDVLIVKPGLPYTSL 127
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L + V RG IETRL KL+ + I+LA AG+
Sbjct: 128 SELPAGSVVGTSSIRRTAQLAMKFPHLKVQSVRGNIETRLAKLDAEDGPFTCIILAAAGL 187
Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R I + L+ + + GQGAI IE ++ +++ + + T+ V ER
Sbjct: 188 LRTGMGGRITQYLDSKSGSLLYAVGQGAIGIEIRSDDALVLDMLNNVGDQKTFKEVLTER 247
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD---AI 286
+ L ++G C + + + L+ I+++ DG A
Sbjct: 248 SLLRSIEGGCSAPLGVESEWVEDADGTTKLHVRSIIVSVDGTRHSTAELEKVIESPVAAE 307
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G + AQ + +
Sbjct: 308 TFGLELAQELVTNGAGPILE 327
>gi|219852323|ref|YP_002466755.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c]
gi|219546582|gb|ACL17032.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c]
Length = 294
Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 91/304 (29%), Positives = 137/304 (45%), Gaps = 22/304 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LA + S L + ++T GD +T L EIGG
Sbjct: 1 MS---IRVGTRGSALARVQTEKVCSMLASR----GIETETVVITTHGDAVTGVPLHEIGG 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+F ++ + + EIDCAVHS KD+P G+ A L R D +
Sbjct: 54 QGVFVRALDDAIEAQEIDCAVHSLKDVPALRPPGVLTCAVLKRNSPADFLA------VDA 107
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +IG+SS RR+A LLR + V RG ++TR+ KL + I+LA AG++RL
Sbjct: 108 VENPQIIGSSSTRRRAQLLRHDPSLEVKQLRGNVDTRIRKLKAGEYDGIVLAEAGLQRLG 167
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
K L +++F PSP QG + + + + L ++HE T V ERA + EL
Sbjct: 168 LSLKGK-RLPVDEFVPSPNQGTVAVVCREDPSLIETLACALDHEGTRQDVVFERAVMEEL 226
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDA---AQYI 296
G C + + VLA DG + + + + +A IGR A +
Sbjct: 227 GGGCFVPEGVYCR--DG--HLIAEVLALDGSRYQRIEADPSDVREAREIGRRLKVQAADL 282
Query: 297 RFIS 300
+
Sbjct: 283 ISDA 286
>gi|297618662|ref|YP_003706767.1| porphobilinogen deaminase [Methanococcus voltae A3]
gi|297377639|gb|ADI35794.1| porphobilinogen deaminase [Methanococcus voltae A3]
Length = 316
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 14/305 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR S LA+ L ++ + II + T GD+ N+ L ++G G+
Sbjct: 4 TIRIGTRGSKLAMVQTNYVNEILNKEIQTNKDIDTEIIKIKTVGDKDQNKKLVDLG-LGV 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+K ++ E D AVHS KD+PT L I A PRE D+ I + L
Sbjct: 63 FTKEIDKSMLLNETDIAVHSLKDVPTLWSDELIIKAVPPRESYNDLLIWKKNRKLNVFQD 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
V+GTSS+RR A L ++ V RG ++TRL KL++ + AI++A AG+ RL
Sbjct: 123 DIVVGTSSIRRAAFLEIRYPNLDVKLLRGNVQTRLKKLDDEEYDAIIMAEAGLNRLNINL 182
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ P+P QGAI I T + + E+V++++ + T V ER L E G
Sbjct: 183 EDYNYEVLNML-PAPAQGAIGIATRKADEEINEIVELLDDKKTHLEVLAERNALKEYGGG 241
Query: 244 CKSAIAGFAYCKGST--LYFYG-IVLASDGKIFHEVSRNG-------NRCDAINIGRDAA 293
C++ A L +V ++GK VS+ G + A ++G++
Sbjct: 242 CQAPFGALAVYDEEENVLSLTCDLVFEANGKNVL-VSKEGFVYCDIDDFEKAADLGKNLG 300
Query: 294 QYIRF 298
+ ++
Sbjct: 301 KLLKS 305
>gi|170096450|ref|XP_001879445.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645813|gb|EDR10060.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 340
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 12/314 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K IG R S LA A RS L + P I I +TE GG
Sbjct: 15 EQKAIVIGCRPSTLAKIQAELVRSRLKVL--FPASRFEISSKKFPQPEIGTSQITERGGA 72
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118
L+T E+E L G+ID VHS KD+PTKL +G +I L RED RD + ++L
Sbjct: 73 SLWTTELEDALFDGDIDILVHSLKDVPTKLKEGCEIIHVLEREDRRDCLVVKDGLPYRTL 132
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176
++L SV+GT S+RR A + R + + D RG I+TRL KL++ A++LA AG+
Sbjct: 133 EELPAGSVVGTGSVRRVAQMKRRYPLLVIKDVRGNIDTRLQKLDSPDLPYTALILASAGL 192
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL I L+ P+ GQG + E + K + +V + +V ERA
Sbjct: 193 LRLSLHDRITSYLSPPISYPAVGQGCLGAEFRSADTKVKAMVSRLEVWQDGWAVRAERAL 252
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGI--VLASDGKIFHEVSRNG---NRCDAINIGRD 291
L L+G C + ++ G + + + + DG V G + + + +G+
Sbjct: 253 LWVLEGGCAFPVGIWSSWSGDNIASESLSVMTSPDGSEEITVETTGVVASVEEVLELGKQ 312
Query: 292 AAQYIRFISNKNVF 305
AA+ + + +
Sbjct: 313 AARSLLEKGGRGII 326
>gi|291295115|ref|YP_003506513.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
gi|290470074|gb|ADD27493.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
Length = 299
Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats.
Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 14/304 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ IG R S LA A L + P I + +++ +E
Sbjct: 1 MRVIVIGARASLLAQAQTRWVVERLKE--NWPETEFKIRTI-------QSKSASE----Q 47
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
E + + L E+D AV+S K +PT+ GL++ A R + R+ + +A+ L+DL
Sbjct: 48 SAAEALRQALGKREVDIAVYSLKYLPTQEAPGLRLVAVPKRMEPREALVGRSAKRLEDLP 107
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+G +SLRRKA LL R D++V D G ++ RL+ L + A+++ A + RL
Sbjct: 108 KGAVVGVNSLRRKAQLLAHRPDLNVCDLEGDVDDRLSALGTGEYDAMIIGAASLLRLDLR 167
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I ++++ E P+PGQGA+ +E + A+EL +NH ++ ERAFL L
Sbjct: 168 NRIDQLIDPEVMLPAPGQGALGLEVRQGDDWAEELAYSLNHRASFVRTTAERAFLRALGA 227
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
A A A + TL G+V + DG G+ +A +G D AQ +
Sbjct: 228 GDGCAAAALATLEGDDTLLLQGVVASPDGHELIRAEIEGDAEEAAELGHDLAQDLLAEGG 287
Query: 302 KNVF 305
+ +
Sbjct: 288 RELL 291
>gi|148271775|ref|YP_001221336.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829705|emb|CAN00621.1| hemC [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 328
Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats.
Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LALA + + + ++P++T GD +L+ +GG G+F
Sbjct: 13 TLRIGTRGSALALAQTRAIAAEI---TGASGLEVELVPVTTHGDTSR-ESLSSLGGTGVF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GE D VHS KD+PT GL +++ RED RDV + +L L
Sbjct: 69 ASALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ +
Sbjct: 129 ARVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIGRIDA 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAEL 240
E L ++ +P +PGQGA+ +E + + V+ ++ T +V ER LA L
Sbjct: 189 ATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAAL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRD------- 291
+ C + I +A + L +V DG S + D +G
Sbjct: 249 EAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGP 308
Query: 292 AAQYIRFISNKNV 304
++ + ++
Sbjct: 309 VSRELLDAGAADL 321
>gi|319946908|ref|ZP_08021142.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641]
gi|319746956|gb|EFV99215.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641]
Length = 307
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/304 (28%), Positives = 150/304 (49%), Gaps = 10/304 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ ++GTR S LA+ L + H P ++P T+GDR+ + +L IGGKG
Sbjct: 1 MRSIKVGTRKSQLAMTQTKMMVDRLKECH--PDVEFELVPYKTQGDRLVHVSLQTIGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
+F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I
Sbjct: 59 VFVKEIEQALLNRDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIYREEGMTLATL 118
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
+V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+
Sbjct: 119 PQGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGY 178
Query: 182 EKV----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
E LN +F P+ QGA+ IE ++ + E++ I+ ++ + + ER FL
Sbjct: 179 LDQSPSLNIEFLNPHEFIPAVSQGALAIECREDDEEVLEILASIHDKEVENCIQLERCFL 238
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
+ ++ C + A + ++ + + + D ++ + A + +
Sbjct: 239 SLMNADCTFPVGAHAQYIDGHYHLETMLADAKDRCLY---VALTSKDGSDLPKRALEQLM 295
Query: 298 FISN 301
Sbjct: 296 EKGA 299
>gi|196004682|ref|XP_002112208.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens]
gi|190586107|gb|EDV26175.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens]
Length = 314
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 94/335 (28%), Positives = 137/335 (40%), Gaps = 66/335 (19%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME+ RIGTR S LA+ +L ++H P I I+ + T GDR+ ++ L EIG
Sbjct: 4 MEETVVRIGTRKSQLAMIQTHSVVDALREIH--PKARIEIVTMDTIGDRVLDKALPEIGQ 61
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
LFT+++E L +ID +HS KD+P+ L +GL I+A
Sbjct: 62 TNLFTKDLEVALTDNKIDLIIHSLKDVPSTLPEGLAIAAI-------------------- 101
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179
+VIGTSSLRR A L R + + RG + TRL KL+ A++LA AG++
Sbjct: 102 ---GNVIGTSSLRRIAQLKRRFPHLKFENVRGNLNTRLKKLDESGIYDALVLAGAGVELT 158
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
++ + GQGA+ IE N+ K L+ D+ ERAFL
Sbjct: 159 -----------PDECLYAIGQGALGIEIRKNDKKTFSLISAYTDFDSLVCNAAERAFLRF 207
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---------------- 283
LD C I + + L G V + DG + S
Sbjct: 208 LDKGCSVPIGVYTEFTENKLKITGAVFSLDGSKRVQYSDECTISGLNAKDDCESNYESLS 267
Query: 284 -------------DAINIGRDAAQYIRFISNKNVF 305
+A +G+ A+ I V
Sbjct: 268 SILCPSEMCNSLIEAERLGKYVAEMILKNHGGEVL 302
>gi|118376440|ref|XP_001021402.1| porphobilinogen deaminase family protein [Tetrahymena thermophila]
gi|89303169|gb|EAS01157.1| porphobilinogen deaminase family protein [Tetrahymena thermophila
SB210]
Length = 362
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 99/334 (29%), Positives = 158/334 (47%), Gaps = 30/334 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLM--DVHKIPPHNIVIIPL---------------- 43
+ + F+I +R S LAL+ +E L+ + N ++P+
Sbjct: 17 KNRKFKIASRSSQLALSQTYEVIDLLVGVKELGLTKENFEVVPISNAPGKNCTLKFKINI 76
Query: 44 -----STKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQIS 98
+ KGD+ L +GG G+FT+ +E +L++ D AVHS KD+PT + + L I
Sbjct: 77 TNKQFTNKGDQNLKDPLYVMGGVGVFTKIVEVELLNKNGDIAVHSLKDLPTIIDERLFIG 136
Query: 99 AYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155
A P + DV I + + LKDL SVIGTSSLRR L + + RG +
Sbjct: 137 AVPPLKPRGDVVIFNEKHKGKELKDLPEGSVIGTSSLRRITNLKNRYPHLKYENIRGNLN 196
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
TRL KL N + AI+LA AG+ RL + + + L EDF +PGQGA+ ++ ++ +A
Sbjct: 197 TRLTKLENGQYDAIILAEAGVFRLGWIEKVGQFLKQEDFLYAPGQGALGVQCRADDKEAI 256
Query: 216 ELVKVINHEDTWDSVNCERAFLAELD---GSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
L+ IN ++ V+ ER FL +L+ CK IA + TL G V + +
Sbjct: 257 ALLSYINQKEPRIRVDAERQFLNKLEGVILGCKLPIAVHSEIIDQTLRLTGQVWSLEADK 316
Query: 273 FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G+ D ++G ++ ++ +
Sbjct: 317 TIREVIEGHISD-QDLGLKLSEKMKQAGAGEILE 349
>gi|119871570|ref|YP_929577.1| porphobilinogen deaminase [Pyrobaculum islandicum DSM 4184]
gi|158512988|sp|A1RQK2|HEM3_PYRIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|119672978|gb|ABL87234.1| hydroxymethylbilane synthase [Pyrobaculum islandicum DSM 4184]
Length = 301
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 9/295 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F
Sbjct: 2 KIRVATRGSKLSLIQTEELLAQIKAVE--PDVQFEIVVVKTTGDLIQDKPLFQIGVKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D AVHS KD+P++L GL ++ + R DV IS +L+ L
Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSELTPGLVLAGFSKRAPPHDVLISRGGYTLETLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG++RL
Sbjct: 120 AVVGTSSVRRAEFLKAVRPDVEVKPLRGNVDTRVGKVLSGQYDAAVMAAAGLQRLYGSSP 179
Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I+ + E+ PP PGQG + + +L+K + + ERAFLA +
Sbjct: 180 PVSIVPLRVEEVPPPPGQGIVVAVVKEEDSWLIDLLKKASDKTAAIEATAERAFLAGVGA 239
Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C AI G A +L F A G + V G D + +G+ AAQ I
Sbjct: 240 GCHVAIGGVAKLTPQGSLEFTAGYAA--GGAKYVVKVFG--EDPVEVGKRAAQLI 290
>gi|327403451|ref|YP_004344289.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823]
gi|327318959|gb|AEA43451.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823]
Length = 304
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 92/260 (35%), Positives = 141/260 (54%), Gaps = 10/260 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ RIG+R S LAL A + L + + I ++TKGD+I + + ++ GKG
Sbjct: 1 MRNIRIGSRGSDLALWQANHVKKQLEAL----GAEVGITIITTKGDQIQDLSFDKLEGKG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+EIE+ L+ ID AVHS KD+ T +GL I+A RE+ DV + H KD
Sbjct: 57 FFTKEIEQALLDNSIDLAVHSHKDLETNTPEGLIIAAVSERENPADVLLIHPNAFDKDEF 116
Query: 123 L----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+V+GTSS RRK+ ++ +RSDI + D RG + TRL KL + AILLA AG+ R
Sbjct: 117 WSLKKGAVVGTSSARRKSQVIAFRSDIEIKDLRGNVPTRLQKLIDGGYDAILLAKAGLDR 176
Query: 179 LKKEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
L+ + + + E+F P+P QG + ++ N+ + ++ +NHED + ER
Sbjct: 177 LQLDLKGMHEVVLDPEEFIPAPAQGVLALQIRENDNELYNFMQAMNHEDIQSQIALERNL 236
Query: 237 LAELDGSCKSAIAGFAYCKG 256
L L G C+ + + +G
Sbjct: 237 LNRLQGGCQLPLGAYCPEEG 256
>gi|163814461|ref|ZP_02205850.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759]
gi|158450096|gb|EDP27091.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759]
Length = 350
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 103/315 (32%), Positives = 161/315 (51%), Gaps = 28/315 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK
Sbjct: 38 QKKTVKVGTRGSKLALAQTELVIKALNE--RFPQIDFQMVTMSTRGDRDTSRALLEFGGK 95
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
+F EE E+ ++ G+ID AVHSAKDMP ++++GL IS LPR +DVFI + D
Sbjct: 96 AVFVEEFEEAILKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDVFIYKSG-RSFDR 154
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180
V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL
Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYPNAVCKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214
Query: 181 ---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
K+++ L+ E P+ QG I IET + +A ++V+ IN +
Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYLSTESMLPAACQGIIAIETRTSG-EAYDMVRAINDTE 273
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF---YGIVLASDGKI-----FHEVS 277
+ + CERA L+ L+ C I ++ KG + +SD + H +
Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELKGKHMKLSLMKVDAASSDKEKDEEIQIHRKT 333
Query: 278 RNGNRCDAINIGRDA 292
GN + +
Sbjct: 334 VEGNTSEWEQLVEAL 348
>gi|308177931|ref|YP_003917337.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117]
gi|307745394|emb|CBT76366.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117]
Length = 324
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 143/323 (44%), Gaps = 26/323 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + FR+GTR S LA L I ++ + + T+GD +T +L +GG
Sbjct: 1 MSE-SFRVGTRGSALATTQTGWAAQKLA---GISGLDVETVLVKTEGDVVTG-SLATLGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + + L+ D AVHS KD+PT +GL ++A RED+RD S + L
Sbjct: 56 TGVFAAALRQHLLDAGCDLAVHSLKDLPTAQPEGLVLAAIPAREDVRDALCSRDSLGLDQ 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------------NNK 165
L + IGT S RR A LL +RSD ++D RG + TRL ++
Sbjct: 116 LPHGAKIGTGSPRRAAQLLAYRSDFEIVDIRGNVPTRLGRVKGVGKTLDDGSVGRSTQGD 175
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV---IN 222
A++LA AG++RL E I E L+ P+PGQGA+ +ET Q L +
Sbjct: 176 LDAVILAAAGMRRLGLEDHITEYLDPSIMLPAPGQGALALETRSAGSGHQALDAALSQFD 235
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--- 279
T V ERA L+ L+ C + I A+ G L + DG S
Sbjct: 236 DAHTRMQVEAERALLSTLEAGCAAPIGALAHIDGDDLVLEAVACNPDGSETMRRSARIAC 295
Query: 280 GNRCDAINIGRDAAQYIRFISNK 302
A +GR AQ +
Sbjct: 296 STTDAAQQLGRSLAQSMIADGAA 318
>gi|297159419|gb|ADI09131.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1]
Length = 345
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 19/315 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA+A + + ++ V P + ++ ++T+GD ++ L +IGG G+F
Sbjct: 29 PLRLGTRRSALAMAQSGQIADAVRRVTGRP---VELVEITTRGD-VSREDLAQIGGTGVF 84
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GEID AVHS KD+PT L ++A RED RD I+ + +L
Sbjct: 85 ATALREALLRGEIDFAVHSLKDLPTAQPDDLVLAALPAREDPRDALIARDGLTFAELPPG 144
Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ IGT S RR + L W I + RG ++TR+ + + + A++LA AG+ RL
Sbjct: 145 ARIGTGSPRRTSQLRAWARSLGLRIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLARLG 204
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ EIL+ + P+PGQGA+ +E N + ++ T +V ER+ LA L
Sbjct: 205 RLDEATEILDADHILPAPGQGALAVECAAANAALAAQLAELDDPLTRVAVTAERSLLAAL 264
Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR-----CDAINI-G 289
+ C + + A G + G+V +DG ++S G +A + G
Sbjct: 265 EAGCSAPVGALADLLGDGQAVTEMRLRGVVGTTDGSSLVQLSITGPVPTAPGEEAAQLMG 324
Query: 290 RDAAQYIRFISNKNV 304
+ A + +
Sbjct: 325 HELAAEMLAKGAAGL 339
>gi|189184545|ref|YP_001938330.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda]
gi|238054423|sp|B3CUP9|HEM3_ORITI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189181316|dbj|BAG41096.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda]
Length = 298
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 107/296 (36%), Positives = 163/296 (55%), Gaps = 5/296 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+G+R S LAL A + + + N +IIP+ T GD I N+ L +IGGKGLF
Sbjct: 3 IRVGSRASRLALIQAQAVVQKI---NDLLGLNAIIIPIKTTGDLIQNKNLYDIGGKGLFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE L++ ID AVHS KD+P L GLQ++A L R ++ D+ +S A + DL L +
Sbjct: 60 KEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGNVGDMLVSKIANKITDLPLGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184
+GTSS+RR+ LLR R D++++ FRG ++TR NK+ NN+ A +LA AG++RL +
Sbjct: 120 RVGTSSVRRRIQLLRLRPDLNIVLFRGNVDTRWNKIFNNEVDATVLAAAGLQRLNYDTSR 179
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I++ ++ P+ GQG I IE ++ L INH+ TW + ER +L L+ C
Sbjct: 180 FCNIISQDEMLPAIGQGVIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADC 239
Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
I G A Y + ++ + + F G +IG +AA+ +
Sbjct: 240 NVPIGGLANYIGNNNFEAKFMLGDYNMRYFFYSEVCGKLQHGYDIGVEAAKNFQKK 295
>gi|84490120|ref|YP_448352.1| porphobilinogen deaminase [Methanosphaera stadtmanae DSM 3091]
gi|84373439|gb|ABC57709.1| HemC [Methanosphaera stadtmanae DSM 3091]
Length = 290
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LA +L ++ + T GD+I N L I KG+FT
Sbjct: 1 MIVGTRGSKLATTQTKTVVKALEEITGEEIET---KIIKTTGDKIKNSQLYNIDAKGIFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ LI G ID AVHS KD+P++L L I+A RE I +V IS+ S +L ++
Sbjct: 58 KELDTALIDGSIDFAVHSFKDLPSELNDQLTITAIPQREAINEVLISNY--SWDELPENA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR+A I RG I+TR+ K+ + A ++A AGI RL ++ I
Sbjct: 116 TLGTSSVRREAFCKLHGKKIQTKPIRGNIDTRIRKVEEGEYDATIMALAGINRLGLQEHI 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
KE+ + + P GQGA+ + T + + +++ +NHED+ E+A L + C+
Sbjct: 176 KEVFDEQYITPPAGQGALAVMT-HKDSEYNDVISKLNHEDSRIEAMTEKAILETIGVGCQ 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
I + G+ + + +L+ +GK+ +V++ ++ +AIN + +R
Sbjct: 235 WPIGIVSKVDGNNINIHCKLLSPEGKLLADVNKTTDKNNAINTAKVIGTKLRED 288
>gi|330946190|ref|XP_003306713.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1]
gi|311315692|gb|EFQ85212.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1]
Length = 398
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 106/347 (30%), Positives = 150/347 (43%), Gaps = 47/347 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---- 60
P IGTR S LA A SL D + P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVVVQGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116
K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174
+L L ++IGTSS+RR A L + + D RG + TRL KL+ AI+LA A
Sbjct: 148 TLATLPQGAIIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLGKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDDAMKELMSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262
ERA L L+G C I KG L
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLAVGPQPAKDYDKHGNAIEEDEPDVDDQELVLR 327
Query: 263 GIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306
+V++ DGK E N +A +GR+ A+ + +
Sbjct: 328 AMVVSVDGKESVEYEATRKVRNAEEAEEMGREVAKVLIEKGADKILE 374
>gi|195170703|ref|XP_002026151.1| GL16182 [Drosophila persimilis]
gi|194111031|gb|EDW33074.1| GL16182 [Drosophila persimilis]
Length = 630
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 144/304 (47%), Gaps = 26/304 (8%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRT 54
M +K R+G+R S LAL P I +ST GDR+ N +
Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVI------GPTPELYLKQRFEIHTMSTFGDRVLNVS 54
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
L +IG K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD +
Sbjct: 55 LPKIGEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRE 114
Query: 115 AQSLKDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAI 169
+ SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I
Sbjct: 115 NFQGHTIASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGI 174
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T
Sbjct: 175 ILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCR 234
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNG 280
+ ER+FL L G C + +A ++ +G L G V + DG I +
Sbjct: 235 ILAERSFLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAIEIRNHLSC 294
Query: 281 NRCD 284
+
Sbjct: 295 ALSE 298
>gi|291542328|emb|CBL15438.1| porphobilinogen deaminase [Ruminococcus bromii L2-63]
Length = 286
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 152/295 (51%), Gaps = 14/295 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LALA +L ++ P I + +ST GD+ ++ LT +GGKG+F
Sbjct: 2 TIKIGTRKSRLALAQTEMLIKTLK--NRFPNVKIETVYISTTGDKTLDKPLTALGGKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L+SGE D AVHSAKD+PTK+ GL+ISA LPR DVF++ +
Sbjct: 60 IKELEMSLLSGETDVAVHSAKDLPTKIADGLEISAVLPRGSYGDVFVTRN---NFETKDG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---KK 181
VIGT SLRRK + + D RG ++TRL KL N + A++LA AG++RL
Sbjct: 117 FVIGTGSLRRKLFAEKIYPNAKFKDIRGNVDTRLKKLLNGEYDALVLAKAGLERLDLCNG 176
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
E + ++F P+P QG + IE+ N + +++ I+ ++T S ER L L+
Sbjct: 177 EDYTVTPFDADEFLPAPCQGIVAIESR-KNSEVSKMLAEISDKNTMLSFETERQVLHSLN 235
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C + + + + + L++D K + + I + + I
Sbjct: 236 ADCSTPVGAISKVENDRITLS---LSADCKKTVSGTDE--ISNRIKLAKRLVSEI 285
>gi|170783140|ref|YP_001711474.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157710|emb|CAQ02912.1| porphobilinogen deaminase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 328
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 17/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LALA + + + ++P++T GD +L+ +GG G+F
Sbjct: 13 TLRIGTRGSALALAQTRAIAAEI---TGASGLEVELVPVTTHGDTSR-ESLSSLGGTGVF 68
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ GE D VHS KD+PT GL +++ RED RDV + +L L
Sbjct: 69 ASALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRG 128
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ +
Sbjct: 129 ARVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIDRIGA 188
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAEL 240
E L ++ +P +PGQGA+ +E + + V+ ++ T +V ER LA L
Sbjct: 189 ATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAAL 248
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRD------- 291
+ C + I +A + L +V DG S + D +G
Sbjct: 249 EAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGP 308
Query: 292 AAQYIRFISNKNV 304
++ + ++
Sbjct: 309 VSRELLDAGAADL 321
>gi|148642941|ref|YP_001273454.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061]
gi|222445181|ref|ZP_03607696.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii
DSM 2375]
gi|261350258|ref|ZP_05975675.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374]
gi|148551958|gb|ABQ87086.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061]
gi|222434746|gb|EEE41911.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii
DSM 2375]
gi|288861043|gb|EFC93341.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374]
Length = 289
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 101/291 (34%), Positives = 156/291 (53%), Gaps = 6/291 (2%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
+GTR S LALA + L + NI + + TKGD+ITN L + KGLFT+E
Sbjct: 3 VGTRGSQLALAQTNQVCKDLASITN---ENIDVNIIKTKGDKITNSQLYNMDAKGLFTKE 59
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127
++K L+ EID AVHS KD+PT+L + L+I+A R +V IS+ ++ +L +S +
Sbjct: 60 LDKALLEEEIDFAVHSFKDLPTELDEELEIAAVPKRVAPNEVLISN--KNWDELGPNSKL 117
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187
GTSSLRR+A + RG IETR++K+N + A L+A AG+ RL + IK
Sbjct: 118 GTSSLRREAFCNYHNKCFELKPIRGNIETRISKVNGSDLDATLMAQAGLIRLNLTQHIKT 177
Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247
+ ++ P+ GQGA+ I T ++ K E++ +N + V E+ L EL C+
Sbjct: 178 VFPLDYITPAAGQGALAIITRKDSDKK-EIISKLNDYQSRQEVFAEKQVLEELGVGCQWP 236
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
I A K Y I+L +G++ E + G+ DA+ G+ + +
Sbjct: 237 IGAIAQMKDKQFCIYSILLTKEGEVLKEHTEKGSIRDAVQFGKKIGKVFKD 287
>gi|295094641|emb|CBK83732.1| porphobilinogen deaminase [Coprococcus sp. ART55/1]
Length = 350
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 159/315 (50%), Gaps = 28/315 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK
Sbjct: 38 QKKTVKVGTRSSKLALAQTELVIKALNE--RFPQVDFQMVTMSTRGDRDTSRALLEFGGK 95
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
+F EE E+ + G+ID AVHSAKDMP ++++GL IS LPR +D+ I + + D
Sbjct: 96 AVFVEEFEEAIFKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDILIYKSG-RIFDR 154
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180
V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL
Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYRNAECKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214
Query: 181 ---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
K+++ ++ E P+ QG I IET + + ++V+ IN +
Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYISTESMLPAACQGIIAIETRTSG-EVYDMVRAINDTE 273
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF---YGIVLASDGKI-----FHEVS 277
+ + CERA L+ L+ C I ++ G + +SD + H +
Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELHGDHMKLSLMKADAASSDKEKDEEIQIHRKT 333
Query: 278 RNGNRCDAINIGRDA 292
GN + + +
Sbjct: 334 VEGNTAEWEQLVENL 348
>gi|302387415|ref|YP_003823237.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1]
gi|302198043|gb|ADL05614.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1]
Length = 300
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 98/305 (32%), Positives = 147/305 (48%), Gaps = 15/305 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ K RIGTR S LA+A A +L + ++ T+GDRI ++ L E GG
Sbjct: 1 MKSKTIRIGTRRSALAVAQANIMAEALERTGT--GLSAELVLKLTEGDRILDKPLLEFGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F E E+ L+ GEID AVHSAKD+P +L +GL I A L RED RDV ++ +
Sbjct: 59 KGVFVTEFEQALLRGEIDFAVHSAKDLPMELEEGLGIVAVLEREDPRDVLVTPA-SGILS 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI------SVIDFRGKIETRLNKLNNNKAHAILLAYA 174
+IGTSSLRRK + + + RG + TRL+KL I+LA A
Sbjct: 118 GKREIIIGTSSLRRKIQIEEIGKTMWPEALVRCENLRGNVLTRLSKLMEGSYDGIILAAA 177
Query: 175 GIKRLKKE---KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
G+KRL + + + F P+ GQG + +E + + +VK + E+ +
Sbjct: 178 GLKRLGLWEDSRYHYHCFDCDTFIPAGGQGILAVE-GRLDSGLEAVVKSLEDEEARLCLT 236
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291
ER L L+ C I ++ K + GI + G+ + G + +
Sbjct: 237 MERKILKLLNAGCHEPIGVYSRLKNGEIEILGI--SRRGEEAKRIHLRGGIGELDRLALL 294
Query: 292 AAQYI 296
AA+ +
Sbjct: 295 AAESL 299
>gi|302521073|ref|ZP_07273415.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
gi|318061890|ref|ZP_07980611.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG]
gi|318078097|ref|ZP_07985429.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF]
gi|302429968|gb|EFL01784.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
Length = 323
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 90/297 (30%), Positives = 146/297 (49%), Gaps = 21/297 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP R+GTR S LA+A + ++ + P + ++ ++T GD L IGG
Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VELVEITTYGDTSR-EHLARIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ G++D AVHS KD+PT +GL ++A RED RD I+ +L+
Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLER 116
Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L DI + RG ++TR+N + + + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRMAQLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + + L + P+PGQGA+ +E E + ++ T +V ERA
Sbjct: 177 NRLGRGGEVTAYLASDTVLPAPGQGALAVECPPGP--LAEALARLDDPRTRAAVTAERAL 234
Query: 237 LAELDGSCKSAIAGFAYCKG-----------STLYFYGIVLASDGKIFHEVSRNGNR 282
LA L+ C + + A G + + G+V ++DG +++ G+
Sbjct: 235 LATLEAGCSAPVGALADFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGHV 291
>gi|300770169|ref|ZP_07080048.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC
33861]
gi|300762645|gb|EFK59462.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC
33861]
Length = 528
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 26/313 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ IGTR S LA+ A + L + + + T+GD I + L ++ GK
Sbjct: 1 MNRKLIIGTRGSQLAMWQANHIKDRLAAA----GIDSELKVIKTQGDIIQHLRLDKLEGK 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117
G FT+E+E++L+S ID AVHS KD+PT GL I+A RE ++ I +
Sbjct: 57 GFFTKELEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLIVLKDCVDIKK 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG++
Sbjct: 117 RLSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGVE 176
Query: 178 RLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ + + E + + P+P QG + I+ ++ + E ++VI++++ + + ER
Sbjct: 177 RIDMDLSEFYVEEIPPVELIPAPAQGVLAIQIRESDQELYEALQVIHNKEVAEVIAVERK 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA-----SDGKIFHEVSRNGNRCDAINIGR 290
L D C + + + + V D S G
Sbjct: 237 VLNLFDAGCHAPLGCYCRKSEGKYEAWTSVADTSDEFPDRLYIQRDSTEG---------- 286
Query: 291 DAAQYIRFISNKN 303
A+ I K+
Sbjct: 287 -MAEEIFAKFAKD 298
>gi|149278622|ref|ZP_01884758.1| porphobilinogen deaminase [Pedobacter sp. BAL39]
gi|149230617|gb|EDM36000.1| porphobilinogen deaminase [Pedobacter sp. BAL39]
Length = 526
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 142/261 (54%), Gaps = 10/261 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LAL A + L ++ + + T+GD+I N L ++ GKG
Sbjct: 1 MKRLIIGTRGSDLALWQANFIKDRLAEI----GAEAELKIIKTQGDKILNLRLDKLEGKG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQSL 118
FT+E+E++L+ G ID AVHS KD+PT GL I+A RED ++ + +
Sbjct: 57 FFTKELEEELLGGTIDIAVHSHKDLPTTHPAGLTIAAVTEREDPSELLLILKDCVDIKQK 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L +++GTSS RRKA LL RSD+++ D RG + TR+ KL + AI+LA AG+ R
Sbjct: 117 LSLKTGAMVGTSSNRRKAQLLALRSDLNIEDLRGNVPTRIQKLRDENYDAIVLAKAGVNR 176
Query: 179 LKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
L + + E+++ + P+P QGA+ ++ N+ + L++ +NH+DT D + ER
Sbjct: 177 LNIDLSEFHVEVIDPTEIVPAPAQGALAVQIRENDTELFALLQQLNHQDTIDEIAVERKV 236
Query: 237 LAELDGSCKSAIAGFAYCKGS 257
L +G C + + +
Sbjct: 237 LNLFEGGCHMPLGCYCKKEEG 257
>gi|255513653|gb|EET89918.1| porphobilinogen deaminase [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 301
Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 146/310 (47%), Gaps = 15/310 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLST---KGDRITNRTLTE 57
M + IGTR S LA+A A R+ L + P + I+ + T K DR RT
Sbjct: 1 MSESEITIGTRGSELAVAQAEIVRNKLAAIE--PRISFRIVKIKTLNEKVDRSKART--- 55
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
K ++T+EI++ ++ ID AVHS KD+ + + +QI A R+D RDVFI +T
Sbjct: 56 --EKDIYTKEIDEAILERRIDIAVHSLKDLKFNMDENMQIGAVPDRDDPRDVFIGNTETE 113
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ L +++GTSS+RR+ L R + D G I+TRL+KLN+ + I++A AG+K
Sbjct: 114 FEHLGTDALVGTSSIRRRVQLTRINPKPMISDLHGNIDTRLSKLNSGEFSGIVIAAAGVK 173
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL K + + D P+ GQGAI + H +N A EL+K I++ V E F
Sbjct: 174 RLGKAVR-MQYFDERDVVPAIGQGAIAVTVHKDNSAAAELLKRIDNMKARVEVGEEIEFG 232
Query: 238 AELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C I A + + G V GK + A G+ A+ +
Sbjct: 233 KAFGTGCNLPIGANAKMLESGKIGIVGFVSDLAGKTLVKGETETGPGHA---GKSLAELL 289
Query: 297 RFISNKNVFN 306
N+
Sbjct: 290 IKKGAGNLIE 299
>gi|255533333|ref|YP_003093705.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366]
gi|255346317|gb|ACU05643.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366]
Length = 526
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 149/316 (47%), Gaps = 28/316 (8%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K IGTR S LAL A + L + + + T+GD+I N L ++ GKG
Sbjct: 1 MKRLIIGTRGSDLALWQANFIKDKLAAI----GVEAELKIIKTQGDKILNLRLDKLEGKG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121
FT+E+E++L+ G ID AVHS KD+PT GL I+A RED ++ + +
Sbjct: 57 FFTKELEEELLGGTIDIAVHSHKDLPTVHPAGLTIAAVTEREDPSELLLILKDCVSINHK 116
Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+++GTSS RRKA LL R D+++ D RG + TR+ KL + AILLA AG+ R
Sbjct: 117 LSLKKGAMVGTSSNRRKAQLLALRPDLNIEDLRGNVPTRIQKLRDEDYDAILLARAGVNR 176
Query: 179 LKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
L + + E+++ + P+P QGA+ I+ N + ++++ INH +T + + ER
Sbjct: 177 LNIDLSEFHVEVVDTTELVPAPAQGALAIQIRENENELFDILQQINHSETAEEIAIERKV 236
Query: 237 LAELDGSCKSAIAGFAYCKGSTL---------------YFYGIVLASDG-KIFHEVSRNG 280
L +G C + + + + V DG +
Sbjct: 237 LNLFEGGCHMPLGCYCKKEDGQYEVWTSKAETDEDFPDRLFYRVEKLDGLAEKIVAKFSA 296
Query: 281 NRCDAIN--IGRDAAQ 294
+R I R+ +
Sbjct: 297 DRKFPAKVFISREVGE 312
>gi|307611613|emb|CBX01297.1| porphobilinogen deaminase HemC [Legionella pneumophila 130b]
Length = 284
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 91/277 (32%), Positives = 145/277 (52%), Gaps = 1/277 (0%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89
V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDMP
Sbjct: 3 VKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDMPA 62
Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
+L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ +
Sbjct: 63 QLPDGLSLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQIKT 122
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE
Sbjct: 123 LRGNIHTRLSKLESGEYQAIILAAAGLERMGLTHHITQLIPDDIMLPTCAQGALCIECRT 182
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLAS 268
++ + QEL+ +N + V+ ER A+L G+C A + + L VL
Sbjct: 183 DDLEIQELIHSLNDPISALCVHTERRVNAKLGGNCHIPFAVYCTITAENLLLLRAKVLNL 242
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
DG + + G +A I + + +
Sbjct: 243 DGSQMIDDEQQGKIEEAEIIADRCTESLMTKGAMTLL 279
>gi|189200240|ref|XP_001936457.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983556|gb|EDU49044.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 399
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 106/347 (30%), Positives = 149/347 (42%), Gaps = 47/347 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---- 60
P IGTR S LA A SL D + P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVIVQGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116
K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174
+L L + IGTSS+RR A L + + D RG + TRL KL+ AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDEAMKELMSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262
ERA L L+G C I KG L
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLSVGPQPAKDYDKHGNAVEEDEPDVDDQELVMR 327
Query: 263 GIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306
+V++ DGK E N +A +GR+ A+ + +
Sbjct: 328 AMVVSVDGKESVEYEATRKVRNAEEAEEMGREVAKILIEKGADKILE 374
>gi|149186168|ref|ZP_01864482.1| porphobilinogen deaminase [Erythrobacter sp. SD-21]
gi|148830199|gb|EDL48636.1| porphobilinogen deaminase [Erythrobacter sp. SD-21]
Length = 292
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 102/279 (36%), Positives = 148/279 (53%), Gaps = 6/279 (2%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A A ETR+ L H + ++P+ GD++ +R L +IGGK L+T E++ L G
Sbjct: 1 MAQAHETRARLCAAHSWDEARVELVPVIASGDKVQDRPLADIGGKALWTRELDIWLAEGR 60
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
ID AVHS KD+ T G+ I+A LPRED DV + A SL+ + + +GTS+ RR A
Sbjct: 61 IDAAVHSMKDVETIRPDGIAIAAILPREDKADVLL--GATSLEAIPQGAKVGTSAPRRAA 118
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
LL R D+ V+ RG + TR+ KL +A A LA AG+ RL EK + L ED+ P
Sbjct: 119 QLLYARPDLEVVGIRGNVATRMAKLQAGEADATFLAAAGLVRLG-EKSVGVRLEPEDWLP 177
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+P Q AI IE ++ +AQE++ I+H + + V ERA L L G+C S IA +G
Sbjct: 178 APAQAAIGIECRASDERAQEVLAAIDHAHSREEVFAERALLEGLGGTCHSPIAALTRREG 237
Query: 257 STLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDA 292
L + + DG I G+ + +
Sbjct: 238 DALRMTAAIYSPDGAIRIAREARFEPGDLAAPRQLAHEL 276
>gi|126178933|ref|YP_001046898.1| porphobilinogen deaminase [Methanoculleus marisnigri JR1]
gi|125861727|gb|ABN56916.1| hydroxymethylbilane synthase [Methanoculleus marisnigri JR1]
Length = 294
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 138/304 (45%), Gaps = 22/304 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LALA + L D ++ ++T+GD T L IGG
Sbjct: 1 MS---LRIGTRGSALALAQTNKVVGMLADR----GIEAEVVTIATEGDTATGVPLHAIGG 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+F ++ ++ GEID AVHS KD+P GL A L R+ D +
Sbjct: 54 QGVFVRALDDAILRGEIDAAVHSMKDIPAARPAGLVCCAVLERDSPADFLVHECPLDAV- 112
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
SVIG+SS RR A LLR + V RG ++TRL KL + AI+LA AG++RL
Sbjct: 113 ----SVIGSSSTRRCAQLLRDAPALEVKQLRGNVDTRLRKLREGQYDAIVLAEAGLQRLG 168
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E L + F PSP QG I + ++P ++H T V ERA + E+
Sbjct: 169 LT-LPGEPLPTDRFVPSPNQGTIAVVCR-DDPAVAGAFAALDHAPTRLDVEIERAVMEEV 226
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-NGNRCDAINIGRDA---AQYI 296
G C + + G+ VLA DG + + R +A GR A +
Sbjct: 227 GGGCFTPQGIYCR-NGN---LIAEVLALDGSRWERIERHVATVGEAREWGRALRVQAASL 282
Query: 297 RFIS 300
+
Sbjct: 283 IREA 286
>gi|307353670|ref|YP_003894721.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571]
gi|307156903|gb|ADN36283.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571]
Length = 292
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 144/293 (49%), Gaps = 19/293 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M GTR S LALA L D+ + +ST GD +TN L ++GG
Sbjct: 1 MS---LIAGTRASKLALAQTKRVSRMLYDL----EIETQVKKISTSGDNVTNVPLHKVGG 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+F + ++ ++ GEID AVHS KD+P K G+ A L R+ D + +
Sbjct: 54 QGIFVKALDDAILEGEIDFAVHSMKDIPAKRPDGVVTCAILKRDSPADFLVHYCPLKEVK 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
++GTSS RR+A LR D+ V + RG ++TR+ KL + AI+LA AG++RL
Sbjct: 114 -----IVGTSSTRRRAQFLRGGLDVEVKELRGNVDTRIRKLKEGEYDAIVLAEAGMERLG 168
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ L + PSP QG I + ++P+ + + +NHE T + ERA + E+
Sbjct: 169 LDLPGT-RLLPQWHVPSPNQGIIAVVCR-DDPELIKTFEPLNHEQTRMDASVERAVMEEI 226
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDA 292
G C + F + + VL+ DGK + + +G + +A IG+
Sbjct: 227 GGGCYTPQGVFC--EDG--FLIAEVLSLDGKRWERIEDDGSSVEEARLIGQKL 275
>gi|187734604|ref|YP_001876716.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835]
gi|187424656|gb|ACD03935.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835]
Length = 325
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 146/312 (46%), Gaps = 23/312 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE---- 57
K IGTR S LALA A R++L + P ++ + T GDR T+ L +
Sbjct: 3 SKNTLIIGTRGSALALAQADMVRAALS--LRYPELDVRCEIIHTIGDRRTDVPLADVARV 60
Query: 58 --IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
+ KG+F +E+E L G ID AVHS KD+P++L G ++A LPR + DV I+
Sbjct: 61 SGMVDKGIFIKELETALRDGRIDVAVHSLKDVPSELAAGFTLAAVLPRAAVEDVLITKEP 120
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKL-NNNKAHAILLAY 173
D + T S+RR+ + + S + + RG + TRL KL + A++LA
Sbjct: 121 ----DWNGSGTLATGSVRRRLMARTYWGSGLRFENLRGNVPTRLGKLVEHPGWDAVILAR 176
Query: 174 AGIKRLKKEKV---------IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
AG++RL L +E F P+ GQG + +E ++ + E+++ IN
Sbjct: 177 AGLERLGLYAPETLVEGRKLYMRPLPVEVFIPAVGQGIVGMECRSSDRETAEMLEGINDP 236
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284
+++ ERAFL L +C + + +A+ G L + V G+R
Sbjct: 237 ESFACALAERAFLVRLGANCSTPVGVYAHPDGEELVLRAAYYVPGREEPFAVVIRGDRKA 296
Query: 285 AINIGRDAAQYI 296
+G A + +
Sbjct: 297 PEALGLRAFEEL 308
>gi|15678894|ref|NP_276011.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|11386772|sp|O26960|HEM3_METTH RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|2621967|gb|AAB85372.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 289
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
GTR S LAL L +V K +I KGDRI + L + +GLFT E+
Sbjct: 4 GTRGSRLALVQTNHVIEMLSEVCKEKIEKKIIKT---KGDRIRDSQLYSMDSRGLFTREL 60
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ +++ E+D AVHS KD+P+ L L I+A PRE +V +S +DL S +G
Sbjct: 61 DMAVLNEEVDLAVHSLKDVPSDLDPDLAIAAVPPRESPAEVLVSRLD--WEDLPQGSKLG 118
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSSLRR+A + + + RG I+TR+ K+ + + HA ++A AG+KRL E+ IK
Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMDGEVHATIMAEAGLKRLGLEEHIKRR 178
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
+E F P+ GQGA+ + T + + + I H + V E+ L EL C+ +
Sbjct: 179 FPVEYFTPAAGQGALAVITR-ADSELISSIGRITHHPSLQEVTAEKTLLRELGAGCQCPL 237
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G+ L Y ++L +G++ +V+ G +A +IG+ AA+ +
Sbjct: 238 GVIGRATGNQLTLYAVLLTREGEMLRKVTVRGPLAEAEDIGKKAAKEM 285
>gi|291546286|emb|CBL19394.1| hydroxymethylbilane synthase [Ruminococcus sp. SR1/5]
Length = 257
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 91/259 (35%), Positives = 140/259 (54%), Gaps = 6/259 (2%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
+ T GD I +RTL ++GGKGLF +E++K LI G +VHS KDMP ++ + L + A+
Sbjct: 1 MKTTGDIILDRTLDKVGGKGLFVKELDKALIDGRSILSVHSLKDMPMEVPEELPLLAFSK 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RDV + S D +G SSLRR L + D+ V RG ++TRL KL+
Sbjct: 61 REDPRDVLVLPEGASELDK--SKPLGCSSLRRTLQLKKLYPDMDVRSIRGNLQTRLRKLD 118
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ A++LA AG+KRL I ++ P+ GQG + ++ +A + ++
Sbjct: 119 EGQYSALILAAAGLKRLGLGSRINRYFTADEIIPAAGQGILAVQGRKG--EAYDFLEGYC 176
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGN 281
+D W + + ERAF+ LDG C S +A A G +Y G+ DG + + GN
Sbjct: 177 DKDAWTAGSAERAFVKLLDGGCSSPVAAHAEILGDEIYLRGLYYNEKDGS-YVTGTLRGN 235
Query: 282 RCDAINIGRDAAQYIRFIS 300
+ DA ++GR+ A+ +R
Sbjct: 236 KADAESLGRELAETLRKKG 254
>gi|134045720|ref|YP_001097206.1| porphobilinogen deaminase [Methanococcus maripaludis C5]
gi|132663345|gb|ABO34991.1| hydroxymethylbilane synthase [Methanococcus maripaludis C5]
Length = 304
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 87/303 (28%), Positives = 132/303 (43%), Gaps = 15/303 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+F
Sbjct: 2 KLRIGTRGSTLAMIQTEYIAGLLNDL----GVETEIIIVKTTGDKDQNKKLADLG-LGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K++ EID AVHS KD+PT + LQI+A RE D+ I
Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSEELQITATPKRESPDDIIIWRKDSDFDIEHDE 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RR + L +++ RG + TR+NKL + I++A AG+ R +
Sbjct: 117 LNIGTSSIRRTSFLQFTHPNLTPKLLRGNVATRINKLRTGEYDTIIMAKAGLIRQGIDLS 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E P+P QG I + + + K E++ I + T+ ER L E G C
Sbjct: 177 EFNYKKPEIL-PAPAQGVIGVASRKADTKINEILDKICDKKTYIEAAAERWALKEYGGGC 235
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQY 295
++ FA + L ++ G I S G + A +G
Sbjct: 236 QAPFGAFAIYDTEDGILNLRCELVDEQGTIKRVKSNEGFIICTTDDVELAKELGARVGAL 295
Query: 296 IRF 298
+
Sbjct: 296 FKE 298
>gi|239624018|ref|ZP_04667049.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales
bacterium 1_7_47_FAA]
gi|239522049|gb|EEQ61915.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales
bacterium 1_7_47FAA]
Length = 301
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 93/308 (30%), Positives = 138/308 (44%), Gaps = 20/308 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL L P + ++ T GD+I ++ L E GG
Sbjct: 1 MSN-IIRIGTRKSALALIQTHLIADGLKRA--WPDIEVELVTKETLGDKILDKPLQEFGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F E E+ + G ID AVHSAKD+P +L +GL I+A R D RDV + T +
Sbjct: 58 KGVFVSEFEQAMKEGAIDLAVHSAKDLPMELGEGLVIAAVSGRGDPRDVLV--TMKGSPK 115
Query: 121 LALHSVIGTSSLRRKA-------LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
H VIGTSS RR+ L + ++ RG + TRL KL I+LA
Sbjct: 116 DREHIVIGTSSPRRQLEAVEYRGQLWPGAASLTCATLRGNVHTRLRKLEEGLYDGIILAA 175
Query: 174 AGIKR---LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG++R L + L+ F P+ GQG + +E + A L + I+ + +
Sbjct: 176 AGLERLDLLGNPSYDFKYLDPTVFIPAGGQGIMAVEAREGSDAA-RLCQAIDSREGRLCL 234
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA--INI 288
ER L LD C I ++ + +G + D ++ +S G + +
Sbjct: 235 TLERMVLKLLDAGCHEPIGIYSNIMDGKMEVWG-ISRPD-RVTRRISLEGAVTEKELEAL 292
Query: 289 GRDAAQYI 296
A + +
Sbjct: 293 ALQAGRGL 300
>gi|241766973|ref|ZP_04764769.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN]
gi|241362537|gb|EER58429.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN]
Length = 244
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 140/240 (58%), Gaps = 4/240 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P I TR S LAL A ++ L H + ++ ++T+GD+I +R+L+++GGKGLF
Sbjct: 8 PLVIATRESRLALWQAEHVQALLRAR----GHTVSLLGMTTQGDQILDRSLSKVGGKGLF 63
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G AVHS KD+P +L +G ++ + RED RD F+S SL+ L
Sbjct: 64 VKELEVALEEGRAHIAVHSLKDVPMELPEGFALACVMEREDPRDAFVSPRYASLEALPQG 123
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL ++
Sbjct: 124 AVVGTSSLRRQVLLQALRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLQER 183
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
I+ P+ GQGA+ IE + E + + H++TW +V ERA + GSC
Sbjct: 184 IRTEFATTAMLPAAGQGALGIEIRSDRQDLIEALAPLAHQETWLTVTAERAVSRAMGGSC 243
>gi|114568594|ref|YP_755274.1| porphobilinogen deaminase [Maricaulis maris MCS10]
gi|114339056|gb|ABI64336.1| porphobilinogen deaminase [Maricaulis maris MCS10]
Length = 321
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 114/309 (36%), Positives = 167/309 (54%), Gaps = 14/309 (4%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV----IIPLSTKGDRITNRT 54
M+ +P I TR SPLAL A + ++ L + + I+ L + GDRI +RT
Sbjct: 1 MKPPSRPLAIATRRSPLALVQARDVQAKLAAQCGLSGEDAERCFPILGLVSTGDRIQDRT 60
Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
L E GGKGLFT+EI++ + G AVHS KD+PT L G+ + A L RED RD+ I+
Sbjct: 61 LIEAGGKGLFTKEIDEAQLDGRAAFAVHSMKDVPTVLPDGIVLGALLEREDPRDMLIARD 120
Query: 115 AQSL-KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
++ DL IGT+SLRR+A LL R D+ V+ RG ++TRL KL + HA LA
Sbjct: 121 GETRLADLPEGVTIGTASLRRQAQLLHKRPDLHVVPLRGNVDTRLGKLADGGIHATFLAR 180
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG+ RL + + +++ L ++ P+ QGA+ + + +A V ++H DT +V E
Sbjct: 181 AGLNRLGRAEALRDPLEADEMLPAAAQGAVGVAIRDGDEEAASYVAGLHHRDTELAVLAE 240
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-----RCDAINI 288
RAFL ELDGSC++ IA ++ F G VL DG+ + A
Sbjct: 241 RAFLFELDGSCRTPIAAH--VNKVSMDFIGEVLTPDGQQSWRRQIRFDMTHATPDSARQA 298
Query: 289 GRDAAQYIR 297
G+D + +R
Sbjct: 299 GQDLGRAVR 307
>gi|154150777|ref|YP_001404395.1| porphobilinogen deaminase [Candidatus Methanoregula boonei 6A8]
gi|153999329|gb|ABS55752.1| porphobilinogen deaminase [Methanoregula boonei 6A8]
Length = 294
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 20/301 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LALA + + + +ST+GD +T L EIG +G+F
Sbjct: 2 PVRIGTRGSRLALAQTAIVIKKIEAL----GIEVEQKIISTQGDEVTGVPLHEIGKQGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++ +++ EIDCAVHS KD+P G+ SA L R+ D ++
Sbjct: 58 VRALDDAILNNEIDCAVHSMKDIPAIRPSGVFTSAILKRDSPADYLAFTGP-----VSAV 112
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
V+GTSS RR+A LLR + + D RG ++TR+ K++ + +A++LA AG+ RL ++
Sbjct: 113 KVVGTSSTRRRAQLLRHDPGLDIRDLRGNVDTRIRKMSEGQYNAVVLAEAGLSRLGI-RI 171
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E L E F PSP QG I + +P E++ ++H T V ERA + ++ C
Sbjct: 172 PGERLPPEKFVPSPNQGTIAV-VSRADPSIMEVLSSLDHPATRKDVAIERAVMEQVGAGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDAAQYIRFISNKN 303
+ + + K VL+ DG + + G +A G +R +
Sbjct: 231 FTPMGIYC--KDG--SLIAEVLSLDGTRAERIEKKIGTLEEARAEG----NALRERAGAL 282
Query: 304 V 304
+
Sbjct: 283 I 283
>gi|303244099|ref|ZP_07330437.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1]
gi|302485484|gb|EFL48410.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1]
Length = 311
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 17/314 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LALA + ++ L ++++ ++ I + T GD+ L+E+G G+F
Sbjct: 2 KIIIGTRGSKLALAQTYYIKNLLENLNENLSIDVKI--IKTTGDKNQKSKLSELG-LGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K+++ EID AVHS KD+PT + L ISA RE D+ I + + +
Sbjct: 59 TKELDTKMLNNEIDIAVHSLKDVPTVWNENLTISATPKRESYHDLIIWNKNNDIDIEKDN 118
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++GTSS+RRKA L ++ RG I+TRL KL N AI+LA AG+ RLK +
Sbjct: 119 LIVGTSSIRRKAFLSIKYPNLKTKLLRGNIDTRLRKLRENNYDAIILAEAGLNRLKIDLS 178
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P+P QG I + + ++ + +++K IN T+ ER L E G C
Sbjct: 179 EFNYKRLKIL-PAPAQGVIGVASRKDDKEIIDILKKINDNKTYLESIAERYALREYGGGC 237
Query: 245 KSAIAGFAYCK--GSTLYFYG-IVLASDGKIFH---EVSRNGNRCD---AINIGRDAAQY 295
++ + + LY +V +GK E + D A IG +
Sbjct: 238 QAPFGALSKYDTKNNELYLTCDVVYTLNGKNNIISKEDKIQCDIEDIHLAKKIGIKLGKE 297
Query: 296 IR----FISNKNVF 305
I+ S K++
Sbjct: 298 IKEAESEKSEKHIL 311
>gi|295837224|ref|ZP_06824157.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197699853|gb|EDY46786.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 328
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 87/302 (28%), Positives = 143/302 (47%), Gaps = 26/302 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KP R+GTR S LA+A + ++ + P + ++ ++T GD L IGG
Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VALVEITTYGDTSR-EHLARIGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ G++D AVHS KD+PT + L ++A RED RD I+ +L+
Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEELVLAAIPRREDPRDALIARDGLALEQ 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + IGT S RR A L + RG ++TR+N + + + A++LA AG+
Sbjct: 117 LPRGARIGTGSPRRTAQLNAHARAHGLGIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + + + L + P+PGQGA+ +E E + ++ T +V ERA
Sbjct: 177 HRLGRGAEVTQYLAPDTVLPAPGQGALAVECPPGP--LAEALARLDDPYTRAAVAAERAL 234
Query: 237 LAELDGSCKSAIAGFAYCKGST----------------LYFYGIVLASDGKIFHEVSRNG 280
LA L+ C + + A T + G+V ++DG +++ G
Sbjct: 235 LATLEAGCSAPVGALADFPDGTQDQAARPNEPARQTTEMRLRGVVGSTDGSALVQLTTTG 294
Query: 281 NR 282
+
Sbjct: 295 HV 296
>gi|330945628|gb|EGH47118.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 201
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 2/201 (0%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178
Query: 181 KEKVIKEILNIEDFPPSPGQG 201
E I ++++D P+ G G
Sbjct: 179 FEDRITSAISVDDSLPAGGPG 199
>gi|302349001|ref|YP_003816639.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15]
gi|302329413|gb|ADL19608.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15]
Length = 298
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 81/297 (27%), Positives = 148/297 (49%), Gaps = 7/297 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++ TR S L+L L + + T+GD + +R L IG KG+F
Sbjct: 3 KLKVATRGSKLSLEQVVIAMRFLEQRLG-ERVEYEPVIVKTRGDVMQDRPLFSIGVKGVF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQSLKD 120
+E+ + +++GE D AVHS KD+P++L + L+I+ PRE D + ++D
Sbjct: 62 EKEVNRAVLNGEADVAVHSMKDLPSQLEEDLEIAMVPPREVPNDSLVIGAGSPEVTGVED 121
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
+ +GTSS+RR A L + ++ RG ++TR+ KLN + + +L+A AG++RL
Sbjct: 122 VPSGLSVGTSSVRRIAFLRHYNRNVITKVVRGNVDTRIAKLNRGEVNYLLMAEAGLRRLN 181
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ +L ++ FPP PGQG I + ++P +L++ + E T+ ER F+ +
Sbjct: 182 IPQKRV-MLPLDKFPPEPGQGIIAVVAPSSSP-LFDLLRRASDEVTYAMAMAERKFVELI 239
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + I + +G L + DG++ + +G+ + I R+ + ++
Sbjct: 240 GAGCHTPIGAVSILEGGRLAMIAAAASPDGEVMNFARASGSLGEPERIARELVENLK 296
>gi|296108387|ref|YP_003620088.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy]
gi|295650289|gb|ADG26136.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy]
Length = 284
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 91/277 (32%), Positives = 145/277 (52%), Gaps = 1/277 (0%)
Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89
V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDMP
Sbjct: 3 VKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDMPA 62
Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
+L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ +
Sbjct: 63 QLPDGLLLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQIKT 122
Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE
Sbjct: 123 LRGNIHTRLSKLESGEYQAIILAAAGLERMGLAHHITQLIPDDIMLPTCAQGALCIECRT 182
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-LYFYGIVLAS 268
++ + QEL+ +N + V+ ER A+L G+C A + L VL
Sbjct: 183 DDLEIQELIHGLNDPISALCVHTERRVNAKLGGNCHIPFAVYCTITEEKRLLLRAKVLNM 242
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
DG + + G +A I + + ++
Sbjct: 243 DGSQMIDDEQQGKIAEAEVIADRCTESLMTKGAMSLL 279
>gi|50954011|ref|YP_061299.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|55976376|sp|Q6AHF1|HEM3_LEIXX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|50950493|gb|AAT88194.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 329
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 17/312 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR SPLA+A +++ +I ++ ++T GD +L+E+GG G+F
Sbjct: 15 LRVGTRGSPLAVAQTQAVSAAVARATGF---DIELVTVTTHGDTSR-ESLSELGGTGVFA 70
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L +GE D VHS KD+PT GL + A R D RD + +L +
Sbjct: 71 TALRDALRNGECDLVVHSLKDLPTAPAPGLVLGAVPKRADARDTLCARDGLRFGELPEGA 130
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L R + ++D RG ++TRL++++ A++LA AG+ RL +
Sbjct: 131 SVGTGSPRRAAQLRAQRPGLDIVDIRGNVDTRLSRVSAGDLDAVVLAAAGLGRLGRLDAA 190
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV----INHEDTWDSVNCERAFLAELD 241
+ ++ P +PGQGA+ +E + + + + ++H T + ERA LA L+
Sbjct: 191 TDFFSLSTMPTAPGQGALALEVREGDERGRGPIARALAAVDHATTCAATTAERAVLAGLE 250
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---------AINIGRDA 292
C + + A L+ V DG S A ++G
Sbjct: 251 AGCAAPVGATAMIDDGLLFLTATVYRPDGAAQLTASHAATPDSFGAAHLDEAARDVGERV 310
Query: 293 AQYIRFISNKNV 304
+ ++
Sbjct: 311 VAELLASGAADL 322
>gi|160937983|ref|ZP_02085340.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC
BAA-613]
gi|158438977|gb|EDP16732.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC
BAA-613]
Length = 302
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 137/304 (45%), Gaps = 19/304 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL L V P + I+ T GDRI ++ L E GG
Sbjct: 1 MND-IIRIGTRKSALALIQTQLVADELRQV--CPGIQVEIVTKDTLGDRILDKPLQEFGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+F E E+ + G ID AVHSAKD+P +L +GL I+A RED RDV ++
Sbjct: 58 KGVFVSEFEQAIQEGVIDLAVHSAKDLPMELAQGLTIAAVSGREDPRDVLVT-MRGHRIR 116
Query: 121 LALHSVIGTSSLRRKALLLRWRS-------DISVIDFRGKIETRLNKLNNNKAHAILLAY 173
IGTSS RR+ RG + TRL KL I+LA
Sbjct: 117 PESVVRIGTSSPRRQLQARLMCKTLWPEAAGAECSTLRGNVHTRLRKLEEENFDGIILAA 176
Query: 174 AGIKRLK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230
AG+KRL ++ L E+F P+ GQG + +E A L + ++H +
Sbjct: 177 AGLKRLGLLEQDTYEYTFLAPEEFIPAGGQGLMAVEAK-AGTAAHSLAQAMDHAQGRLCL 235
Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINI 288
+ ER+ L +LD C I ++ + L +G + + + + G +R D +
Sbjct: 236 DLERSVLKQLDAGCHEPIGIYSVLQNGQLEVWG-ISSPR-EEVKRIHLTGGTSRRDIEKL 293
Query: 289 GRDA 292
+A
Sbjct: 294 ASEA 297
>gi|289811310|ref|ZP_06541939.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 235
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 116/225 (51%)
Query: 81 VHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLR 140
+HS KD+P GL + RED RD F+S+ SL DL S++GTSSLRR+ L
Sbjct: 1 MHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAE 60
Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ 200
R D+ + RG + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQ
Sbjct: 61 RRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQ 120
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
GA+ IE +++ + Q L+ +NH T V ERA L+G C+ I +A ++
Sbjct: 121 GAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIW 180
Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+V A DG + R G+ A +G A+ + + +
Sbjct: 181 LRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAIL 225
>gi|227538630|ref|ZP_03968679.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241549|gb|EEI91564.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC
33300]
Length = 528
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 15/294 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ IGTR S LA+ A + L + + + T+GD I + L ++ GK
Sbjct: 1 MNRKLIIGTRGSQLAMWQANHIKDRLAAA----GIDSELKVIKTQGDIIQHLRLDKLEGK 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117
G FT+E+E++L+S ID AVHS KD+PT GL I+A RE ++ I +
Sbjct: 57 GFFTKELEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLIVLKDCVDIKK 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG++
Sbjct: 117 RLSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGVE 176
Query: 178 RLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R+ + E + + P+P QG + I+ ++ + E ++VI++++ + + ER
Sbjct: 177 RIDMDLSDFYVEEIPPVELIPAPAQGVLAIQIRESDQELFEALQVIHNKEVAEVIAVERK 236
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA-----SDGKIFHEVSRNGNRCD 284
L D C + + + + V D S G +
Sbjct: 237 VLNLFDAGCHAPLGCYCRKSEGKYEAWTSVAETSDEFPDRLYIQRDSTEGMAEE 290
>gi|323484735|ref|ZP_08090094.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163]
gi|323401972|gb|EGA94311.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163]
Length = 297
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 6/298 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIG+R S LA+ + + V P + ++ + T GD I +++L +IGG
Sbjct: 1 MINGTIRIGSRESVLAVIQSELIIEEIKRV--CPGVSAQLVTMKTTGDMILDKSLEQIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + + L+
Sbjct: 59 KGLFVKELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLR--KGLES 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+
Sbjct: 117 LPAGPVIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++ PS GQG + ++ +K ++ D+ ERAF+ L
Sbjct: 177 FEGRISRYFSVDEIIPSAGQGIMAVQ--GRKEDYFPFMKEVDAPDSRAMALAERAFVRIL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C S A A LY G+ + G +A +G A ++
Sbjct: 235 DGGCSSPCAACAEAAAGRLYLRGLYYDEASDRYITGEMEGMAEEAEQLGVKLALTLKN 292
>gi|288574447|ref|ZP_06392804.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570188|gb|EFC91745.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 454
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 101/291 (34%), Positives = 140/291 (48%), Gaps = 10/291 (3%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
+R S LA A E +L + I +ST GD + L+ GG G F + +E
Sbjct: 160 SRKSALARAQTMEAARALAKK----GLPVEIKTMSTCGDEKQDCHLSAFGGNGAFVKCLE 215
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+ ++ G+ D A+HS KD+P+ L GL++ A LPR DV +S+ L+ L +V+GT
Sbjct: 216 EAIMEGKGDGAIHSLKDVPSVLPDGLELVAVLPRASTSDVIVSNHKGGLEGLPAGAVVGT 275
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189
SSLRRKA L R D+ RG + TRL KL + A AI+LA AG+ RL L
Sbjct: 276 SSLRRKAQLAITRPDLDYTLIRGNVNTRLAKLQSGDADAIVLAKAGLDRLGISPEGATTL 335
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F P+P QG I +E + + E + INH TW ER L L C A
Sbjct: 336 P---FLPAPCQGIIAVEAR-SGSRLAEEFRAINHRPTWLMALAERELLESLQVGCHVPFA 391
Query: 250 GFAYCKGSTLYFYGIVLASDGKIF-HEVS-RNGNRCDAINIGRDAAQYIRF 298
+ G L L+ DG+ E S + DA ++GRD A I+
Sbjct: 392 ALSEWVGGELRLRAQTLSYDGRHIDFEGSLAVRSDDDARDLGRDVALSIKA 442
>gi|91782420|ref|YP_557626.1| porphobilinogen deaminase [Burkholderia xenovorans LB400]
gi|91686374|gb|ABE29574.1| Porphobilinogen deaminase [Burkholderia xenovorans LB400]
Length = 285
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 98/265 (36%), Positives = 147/265 (55%), Gaps = 3/265 (1%)
Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102
++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L +G +S +
Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVPMALPEGFALSTIME 60
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
RED RD +S+T SL L +V+GTSSLRR+A+L + V RG ++TRL KL+
Sbjct: 61 REDPRDALVSNTYDSLAALPEGAVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLD 120
Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
AI+LA AG+KRL + I+ +L+ ED P+ GQGA+ IE + + + ++
Sbjct: 121 RGDYAAIILAAAGLKRLGLGERIRALLDPEDSLPAAGQGALGIEIRADRAELAAWLAPLH 180
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN- 281
HE T +V ER L GSC+ +A +A L+ GIV DG+ +
Sbjct: 181 HEHTAAAVEAERMVSRALGGSCEVPLAAYATWHDGALHLRGIVATPDGQRVLSAQASAPA 240
Query: 282 --RCDAINIGRDAAQYIRFISNKNV 304
AI +G++ A + +
Sbjct: 241 TSVEQAIALGQEVAGALEQQGAMEI 265
>gi|126460312|ref|YP_001056590.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548]
gi|158513494|sp|A3MWV7|HEM3_PYRCJ RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|126250033|gb|ABO09124.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548]
Length = 296
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 138/296 (46%), Gaps = 8/296 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L E + V P ++ + T GD + +R L +IG KG+F
Sbjct: 2 KIRVATRGSKLSLLQTQELLDQVKAVE--PKVEFELVVVKTTGDVVQDRPLYQIGVKGIF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D AVHS KD+P++L GL I+ + R DV S SL L
Sbjct: 60 EKEVNLAVLRGEADVAVHSLKDLPSELTPGLVIAGFSRRAPPYDVVASREGYSLYTLPKG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-- 182
+V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG+ RL
Sbjct: 120 AVVGTSSVRRAEFLRAVRPDVEVRPLRGNVDTRVGKILSGQYDAAIMAMAGLVRLYGWEA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
V + E+ PP PGQG + ++++ + ER FL +
Sbjct: 180 PVKLSPIRPEEIPPPPGQGIVVAVVKEGEAWLIDILRRASDRRAAVEATAEREFLMHVGA 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
C A+ G A + + F + G + + G D +GR AA+ IR
Sbjct: 240 GCHVAVGGLARYEDGGMSFVAGYAS--GGRRYVIKLWG--EDPREVGRRAAEEIRK 291
>gi|242827493|ref|XP_002488841.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC
10500]
gi|218712002|gb|EED11431.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC
10500]
Length = 413
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 36/338 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN---RTLTEIGG 60
K R+G+R S +AL ++L H + S +GDR R L + G
Sbjct: 72 KAVRVGSRNSKMALIQTSSVAAALYKAHHGF-FTFPVSTHSVQGDRDKTSAFRDLAKAHG 130
Query: 61 ---------KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111
K L+T EIE +L++G+ID VHS KD+PT L G +I A+ R D D +
Sbjct: 131 NKQTAADTAKSLWTLEIEARLLAGDIDLIVHSLKDVPTTLPDGCEIGAFPHRNDPTDALL 190
Query: 112 SH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KA 166
+SL++L SV+GT S+RR A L + + + + RG ++TR+ KL+ N
Sbjct: 191 VKAGLPYKSLEELPAGSVVGTCSVRRTAQLRHYCPHLIIQECRGNVDTRVAKLDANDSPY 250
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
AI++A AGI RL E I + L+ + + GQGA+ IE + KA+ELV I+H T
Sbjct: 251 TAIVVAAAGIVRLNLEHRITQRLSGPAYTYAVGQGALGIEIRKEDQKARELVACIDHWPT 310
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCK---------------GSTLYFYGIVLASDGK 271
ERA L L G C + I + TLY G +L DG
Sbjct: 311 RVRCLAERALLRFLQGGCSAPIGVHSAFVRTPAKGEPNVNDNHYEGTLYLTGTLLHPDGG 370
Query: 272 IFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVFN 306
+ G D+ IG+ + I + + +
Sbjct: 371 MEIRAHEKGQVKCTADSETIGKSVGKKILDLGGAQILD 408
>gi|269837831|ref|YP_003320059.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745]
gi|269787094|gb|ACZ39237.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745]
Length = 311
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 3/299 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LA ++L + P ++ +ST GDR LT IGG+G+F
Sbjct: 11 VRLGTRGSALAREQTRRVMAALAALR--PDLELIETIVSTAGDRDKRTPLTVIGGQGVFA 68
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++ L++G +D AVHSAKD+PT+ + GL I A+ RED RDV +S +SL DL +
Sbjct: 69 RELQTALLAGTVDVAVHSAKDLPTEPVPGLVIGAFFSREDARDVLVSRDGRSLADLPPGA 128
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS RR L R R D+ +D RG ++TRL K+ + A +LA AG+ R+ ++ I
Sbjct: 129 RVGTSSRRRLVALRRLRPDLEAVDLRGNLDTRLRKVREGEVDAAILAAAGLLRMGWQEHI 188
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L+++DF P+PGQGA+ IE ++P E++ +N + ER+FL L G C+
Sbjct: 189 TEFLSLDDFVPAPGQGALAIECRADDPAVNEMLAALNDPAAALAARTERSFLRALGGGCR 248
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303
S I A G T+ ++ + +A A + R ++ +
Sbjct: 249 SPIGAHATVSGDTVTLRVMLGDEAMTRVRLSTWTLPAAEAETRAGALAVEVQRSLAGAD 307
>gi|145476419|ref|XP_001424232.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391295|emb|CAK56834.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 93/311 (29%), Positives = 152/311 (48%), Gaps = 16/311 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIG 59
M+K+ RI TR S LA+A L II +S + GD L ++
Sbjct: 1 MQKQ-IRIATRSSALAMAQTNYVIGELKQ-------EFEIIKVSNEVGDVNLQDPLYQMP 52
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116
G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +
Sbjct: 53 TVGVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLYLAAYTKFEQRGDVVLLNNKYNYK 112
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
SL +L IGTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI
Sbjct: 113 SLSELPEGFKIGTSSLRRIATIKNRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGI 172
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL + I L ++F +P Q A+ I+ ++ + ++++N D+ ER F
Sbjct: 173 LRLGLSERISFDLEEKEFLYAPAQAALGIQCRKDDLQTIARLQILNDIDSQKRCVAERMF 232
Query: 237 LAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L L+G C+ IA ++ C + +Y G V+A DG E +G+ +
Sbjct: 233 LNLLEGGCRLPIAVYSECREDGQVYIKGRVMAVDGSKVIEDEA---LDHFEKVGQILCEK 289
Query: 296 IRFISNKNVFN 306
I+ + +
Sbjct: 290 IKVLGGVELIE 300
>gi|323691803|ref|ZP_08106060.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum
WAL-14673]
gi|323504169|gb|EGB19974.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum
WAL-14673]
Length = 297
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 6/298 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIG+R S LA+ + + V P + ++ + T GD I +++L +IGG
Sbjct: 1 MINGTIRIGSRESVLAVIQSELIIEEIKRV--CPGVSAQLVTMKTTGDMILDKSLEQIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + + L+
Sbjct: 59 KGLFVKELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLR--KGLES 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+
Sbjct: 117 LPAGPVIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMG 176
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E I ++++ PS GQG + ++ +K ++ D+ ERAF+ L
Sbjct: 177 FEGRISRYFSVDEIIPSAGQGIMAVQ--GRKEDYFPFIKEVDAPDSRAMALAERAFVRIL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
DG C S A A LY G+ + G +A +G A ++
Sbjct: 235 DGGCSSPCAACAEAAAGRLYLRGLYYDEASDRYITGEMEGMAEEAEQLGVKLALTLKN 292
>gi|237786464|ref|YP_002907169.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM
44385]
gi|237759376|gb|ACR18626.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM
44385]
Length = 295
Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats.
Identities = 94/306 (30%), Positives = 142/306 (46%), Gaps = 20/306 (6%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKGL 63
RIGTR S LAL A R +L+ + + T GD + IG G+
Sbjct: 2 IRIGTRGSALALTQAGHVRDALISA----GLEAELFTVHTPGDASQGAGTPVARIG-VGV 56
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+ + L +GE AVHS KD+PT ++ A PR D RDV S L DL
Sbjct: 57 FTQTLRTALAAGECSLAVHSFKDLPTAPDPRFRL-AVPPRVDARDVVFSRDRIPLADLPA 115
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S+IGT + RR + R D +V+ RG ++TR+ +L + A++LA AG++RL +
Sbjct: 116 GSMIGTGAPRRMGQVRALRPDCTVVPIRGNVDTRIGRLEKDL-DAVILARAGVERLGRLA 174
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-----NHEDTWDSVNCERAFLA 238
E L+++ P+P QGA+ +E + + +HE + ERA LA
Sbjct: 175 EATETLDVDTVLPAPAQGALAVEAVAEGHENCSEEALYAIHVLDHEMSHRRAIAERAVLA 234
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L+ C + + +A F V A DG S G + +IG AA+Y+R
Sbjct: 235 SLNAGCTAPVGAYATED----SFRAGVFAVDGSERVTWSSEGEPTE--DIGHQAAEYLRA 288
Query: 299 ISNKNV 304
+ ++
Sbjct: 289 HNAMDL 294
>gi|328908097|gb|EGG27856.1| hydroxymethylbilane synthase [Propionibacterium sp. P08]
Length = 334
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 96/333 (28%), Positives = 147/333 (44%), Gaps = 34/333 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LA + L ++ + ++T+GD + +L +GG
Sbjct: 1 MS--AIRLGTRASTLATTQSEMVAGMLRS----EGLDVDLTTITTRGDT-STTSLAAMGG 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L D
Sbjct: 54 IGVFASAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLND 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170
L + +GT S RR A LL R D+++ID RG ++TRL ++ A++
Sbjct: 114 LPQGASVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVV 173
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227
LA +G+ RL V+ E LN P+P QGA+ +E + + +L I+ T
Sbjct: 174 LAASGLARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTR 233
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHEVSRNGN 281
+ ERA L+ L+ C + I A K L +V A DG +
Sbjct: 234 LAATAERAVLSHLEAGCAAPIGALAQLKPAPGKSPEVLTLDVVVTAVDGSRTIREQVSVE 293
Query: 282 RCD--------AINIGRDAAQYIRFISNKNVFN 306
+ A +G AA+ + +V +
Sbjct: 294 LPEEVDPALAAAHTLGMTAAEELLDDGAADVAD 326
>gi|313835649|gb|EFS73363.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA2]
gi|314928321|gb|EFS92152.1| porphobilinogen deaminase [Propionibacterium acnes HL044PA1]
gi|314970250|gb|EFT14348.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA3]
Length = 337
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 96/333 (28%), Positives = 147/333 (44%), Gaps = 34/333 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LA + L ++ + ++T+GD + +L +GG
Sbjct: 4 MS--AIRLGTRASTLATTQSEMVAGMLRS----EGLDVDLTTITTRGDT-STTSLAAMGG 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L D
Sbjct: 57 IGVFASAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLND 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170
L + +GT S RR A LL R D+++ID RG ++TRL ++ A++
Sbjct: 117 LPQGASVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVV 176
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227
LA +G+ RL V+ E LN P+P QGA+ +E + + +L I+ T
Sbjct: 177 LAASGLARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTR 236
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHEVSRNGN 281
+ ERA L+ L+ C + I A K L +V A DG +
Sbjct: 237 LAATAERAVLSHLEAGCAAPIGALAQLKPAPGKSPEVLTLDVVVTAVDGSRTIREQVSVE 296
Query: 282 RCD--------AINIGRDAAQYIRFISNKNVFN 306
+ A +G AA+ + +V +
Sbjct: 297 LPEEVDPALAAAHTLGMTAAEELLDDGAADVAD 329
>gi|32490989|ref|NP_871243.1| hypothetical protein WGLp240 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166195|dbj|BAC24386.1| hemC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 291
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 3/287 (1%)
Query: 20 AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDC 79
+ + L +H P NI ++P+ T GD I KGLF +E+EK L+ + D
Sbjct: 3 SKLCKKKL--LHYHPKLNIKLVPILTTGDLINKIRNNITNEKGLFIKELEKSLLKYQSDI 60
Query: 80 AVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLL 139
AVHS KD + L L ++A R+D RD +S+ ++ L ++ +GTSSLRRK LL
Sbjct: 61 AVHSMKDFSSSFLDSLGLAAICKRDDPRDAIVSNYYNNIISLPNNAKVGTSSLRRKCQLL 120
Query: 140 RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPG 199
R D+ + +G I +RL KLN A++LA A +KRLK + + ++ P+ G
Sbjct: 121 SIRPDLKIFPCKGNIHSRLKKLNQGVFDALILATAALKRLKINEQMYTPIDPSYLLPAMG 180
Query: 200 QGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-ST 258
QG+I I+ + + K ++V+ IN++ T +N E+ ++ L C+ I +A + +T
Sbjct: 181 QGSIAIQCRLYDNKIIDIVRNINNKKTALCINSEKIVVSMLGTGCRVPIGSYAKIENKNT 240
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
++ +V + DG +A + + + + + KN+
Sbjct: 241 IWIRALVGSIDGSNIIRSEGKSCVSNAEKLSKKQVKNLINLGAKNIL 287
>gi|256826210|ref|YP_003150170.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547]
gi|256689603|gb|ACV07405.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547]
Length = 358
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 36/332 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA + +L H + ++ ++T+GD L+ IGG G+
Sbjct: 14 RVVRLGTRRSDLATTQSTHVADALRAR----GHEVELVLVTTEGDVNR-APLSRIGGTGV 68
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F + L++GEID AVHS KD+P + L I+A RED RD ++ +L+ L
Sbjct: 69 FVSALRDALLAGEIDIAVHSLKDLPVAQPQELVIAAVPEREDPRDALVARDGLTLETLPA 128
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT S RR+A L R D+ V+D RG + RL + + A++LA AG++RL +
Sbjct: 129 GARVGTGSPRREAQLRVARPDLEVVDLRGNVPRRLATVAEGELDAVVLAGAGLRRLGLTE 188
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
+ + L + P+PGQGA+ +E ++ ++ +++ ++H T + ERA L L+
Sbjct: 189 HVTQWLEPQVMVPAPGQGALAVECRSDDAESIAMLEPLDHLPTRTATTAERAVLGTLEAG 248
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFH----------------------------- 274
C + I A G+ + DG
Sbjct: 249 CSAPIGALARHDGARVDLMTFAGPRDGSRALLEADCARGVPAGHPADTPDDTPADTPDDS 308
Query: 275 -EVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R A +GR A+ +R +V
Sbjct: 309 RNDDRVALDTAARELGRRVAEALRG-GGADVL 339
>gi|312216693|emb|CBX96643.1| hypothetical protein [Leptosphaeria maculans]
Length = 398
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 101/346 (29%), Positives = 144/346 (41%), Gaps = 47/346 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---- 60
P IGTR S LA A SL + H P I P+ +GDR L ++
Sbjct: 30 PINIGTRNSVLAQIQARAVERSLKEAH--PERTYNICPVVVQGDRDKTTPLQQLSRGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116
K L+T E+E L SGE+D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELESMLESGELDLIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPKET 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174
+L L + IGTSS+RR A L + + D RG + TRL KL+ AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRSATLRKLFPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G+KR+ + I + L+ + GQGA+ IE + + L+ I E T + +
Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKGDESTKALLSKIRCERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFA------------------------------YCKGSTLYFY 262
ERA L L+G C I + L
Sbjct: 268 ERALLRTLEGGCSVPIGVETSWRGGRGLTTGAQPARDYDKHGNAVEEEEPHVDDQELVLR 327
Query: 263 GIVLASDGKIFHEVSR---NGNRCDAINIGRDAAQYIRFISNKNVF 305
+V++ DG E + +A +GR+ A + +
Sbjct: 328 TLVVSVDGTESVEYEVAQKVRSAEEAETMGREVALKLIEKGADKIL 373
>gi|49388603|dbj|BAD25718.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group]
gi|215686353|dbj|BAG87614.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717107|dbj|BAG95470.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 105/260 (40%), Positives = 156/260 (60%), Gaps = 3/260 (1%)
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
I ++ L +IGGKGLFT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD
Sbjct: 2 ILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDA 61
Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169
FI TA SL +L SV+G++SLRR++ +L + V++FRG ++TRL KL HA
Sbjct: 62 FICLTASSLAELPAGSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHAT 121
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
LLA AG+KRL + +L++++ P+ QGAI I ++ + +NHEDT +
Sbjct: 122 LLALAGLKRLNMAETATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLA 181
Query: 230 VNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--AI 286
V CER FL+ LDG+C++ IA +A K F G++ + DG +E SR G +
Sbjct: 182 VACEREFLSVLDGNCRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMV 241
Query: 287 NIGRDAAQYIRFISNKNVFN 306
+G+DA ++ + F+
Sbjct: 242 EMGKDAGHELKAKAGPGFFD 261
>gi|332666630|ref|YP_004449418.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100]
gi|332335444|gb|AEE52545.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100]
Length = 300
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 87/306 (28%), Positives = 145/306 (47%), Gaps = 15/306 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIG 59
+ RIGTR S LAL A TR L + + ++ + T GD + N + +I
Sbjct: 1 MDQTIRIGTRGSKLALWQAEFTREKLREA----GYASELVIIKTTGDNTQHLNLSFDKIE 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--- 116
GKG FT+EIE L+ G++D AVHS KDMPT GL ++A RED D +
Sbjct: 57 GKGFFTKEIEDALLRGDVDMAVHSMKDMPTSSPDGLVLTAVSYREDPADWLLVRKESLEE 116
Query: 117 -SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L + ++GTSS RRKA +L R D ++ D RG + TR++KL + AI+LA AG
Sbjct: 117 GQRFQLKQNPIVGTSSARRKAQILDLRPDATLKDIRGNVPTRVDKLLQGEFDAIMLAAAG 176
Query: 176 IKRLKKEKVIKE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+ RL+ + + +F P+P QG + + + ++ ++ ++H D N E
Sbjct: 177 LSRLELDLSAVHVVKFDPREFIPAPAQGVLAYQACTEDKVIRKALQHLHHSDVSLVTNIE 236
Query: 234 RAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
R L ++G C+ + + + + + +V ++ + +
Sbjct: 237 RRILQLMEGGCQMPLGVYCEHDAAGNYHVWAAKADAWNAPVKKVRQSSSTS--YLLAEKV 294
Query: 293 AQYIRF 298
A+ ++
Sbjct: 295 AEELKK 300
>gi|282853361|ref|ZP_06262698.1| hydroxymethylbilane synthase [Propionibacterium acnes J139]
gi|282582814|gb|EFB88194.1| hydroxymethylbilane synthase [Propionibacterium acnes J139]
Length = 334
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 92/333 (27%), Positives = 142/333 (42%), Gaps = 34/333 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LA + L ++ + ++T GD + +L +GG
Sbjct: 1 MS--AIRLGTRASTLATTQSEMVARLLRS----EGLDVDLTTITTHGDT-STASLAAMGG 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L D
Sbjct: 54 IGVFASAIRATLLKGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHD 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170
L + +GT S RR A LL R D++++D RG ++TRL ++ A++
Sbjct: 114 LPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVV 173
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227
LA +G+ RL + E L+ P+P QGA+ +E + + +L I+ T
Sbjct: 174 LAASGLARLGHSGTVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTR 233
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHE------ 275
+ ERA L+ L+ C + I A K L +V DG
Sbjct: 234 LAATAERAVLSHLEAGCAAPIGALAQLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVE 293
Query: 276 --VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+ A +G AA+ + +V +
Sbjct: 294 LPAEVDSALAAAHTLGVTAAEELLDDGAADVAD 326
>gi|269791662|ref|YP_003316566.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099297|gb|ACZ18284.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 307
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 100/299 (33%), Positives = 146/299 (48%), Gaps = 14/299 (4%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
TR SPLA+A A + + + H++ ++ +ST GDR R L GG G F + +E
Sbjct: 8 TRSSPLAMAQARMWKDRIESL----GHSVRLLDVSTHGDRDRRRHLACFGGFGAFVKALE 63
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+L+SG+ AVHS KD+P+ GL I+ L R DV ++ SL++L +VIGT
Sbjct: 64 DRLLSGQGHGAVHSLKDVPSVQPDGLVIAGVLERGPRGDVLVTREGLSLEELPSGAVIGT 123
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189
SS+RR A + R D++V RG + +RL KL H I+LA AG++RL + E+
Sbjct: 124 SSIRRAAQVRMLRGDLNVECCRGNVHSRLRKLEQGLFHGIVLARAGLERLGIRAPMAELP 183
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F SPGQGA+ +E + L + H TW V ER+FL C + +A
Sbjct: 184 ----FITSPGQGAVALEAR-EGSELHLLGARLTHRSTWLEVLAERSFLKAFGMGCSAPVA 238
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305
A TL VL+ +G E + DA +G A + I + V
Sbjct: 239 ASAVMDRDTLTLKVQVLSPNGTSAAEAEVSCVPWGEEDAYALGEAAFREI--SGSPEVL 295
>gi|311111780|ref|YP_003983002.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931]
gi|310943274|gb|ADP39568.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931]
Length = 371
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 95/367 (25%), Positives = 146/367 (39%), Gaps = 65/367 (17%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSL--------MDVHKIPPHNIVIIPLSTKGDRITN 52
M P+ +GTR S LAL + + + + I + T GD +
Sbjct: 1 MSD-PYILGTRGSALALTQSTLAAEHIVQMFNAHSREHGAERTLSFDITTVKTDGD-VLT 58
Query: 53 RTLTEIGGKGLFTEEIEKKLISGEI----DCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108
L +GG G+F + ++L+ G+ D AVHS KD+P + GL I+A L RED RD
Sbjct: 59 GPLATLGGTGVFAAALRQRLLDGDTPDGVDVAVHSLKDLPAEPCPGLVIAAILEREDPRD 118
Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------- 161
++ +L L + +GT S RR A + R D+ ++D RG + TR+ ++
Sbjct: 119 ALVARDNLTLDTLPTGARVGTGSPRRAAQVHALRPDLEIVDIRGNVGTRIARVKGLEEHG 178
Query: 162 -----------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198
N A++LA +G+KRL KE VI E L+ P+P
Sbjct: 179 NRQVIVRDSAETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPAP 238
Query: 199 GQGAICIETHVNNPKAQELVK------------------VINHEDTWDSVNCERAFLAEL 240
GQGA+ IE + +H +T V ER L L
Sbjct: 239 GQGALAIEVRETEFANPDTATLFNSEISQPVRTLGEALIAADHFETHLEVTAERRLLRRL 298
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-VSRNGNRC--DAINIGRDAAQYIR 297
+ C + I +A K L +V + DG S G A +G A+ +
Sbjct: 299 EAGCAAPIGAYATVKDGDLVLTAVVASPDGTESLRHTSATGELDVPGAERLGIRVAEDLL 358
Query: 298 FISNKNV 304
+ +
Sbjct: 359 QMGAAAL 365
>gi|88603799|ref|YP_503977.1| porphobilinogen deaminase [Methanospirillum hungatei JF-1]
gi|88189261|gb|ABD42258.1| hydroxymethylbilane synthase [Methanospirillum hungatei JF-1]
Length = 295
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 138/301 (45%), Gaps = 20/301 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA A A + + L D+ + ++ +ST GD T L EIGG+G+F
Sbjct: 2 PLRVGTRASELAKAQAVKVCTMLEDL----GVDTELVFISTAGDEQTGVPLHEIGGQGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++ L+ +ID AVHS KD+P + GL SA L R+ D + + +L
Sbjct: 58 VRALDDALVQNKIDLAVHSMKDIPAERPYGLVTSAILARDSPCDYIV-----TDHELDEI 112
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS RR A R + RG + TRL+KL + + AI+LA AG++RL
Sbjct: 113 TTLGTSSTRRTAQCRRNLPWADIRPLRGNVNTRLSKLQSGEYDAIMLAKAGLERLSMTLD 172
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L+ PSP QG I + +P +++ I+ T ER + + G C
Sbjct: 173 GYQ-LDPRVHVPSPNQGTIAV-VSRTDPDVTDIISKIDDPKTRMDTLLERRVMEMIGGGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-NGNRCDAINIGRDAAQYIRFISNKN 303
+ + + L VL+ +G + R + DA G + R +
Sbjct: 231 FTPLGIYCK---DRL-MIAEVLSLEGDRHFRLERLVSDIDDADRFGLEV----RERAGDL 282
Query: 304 V 304
+
Sbjct: 283 I 283
>gi|327398182|ref|YP_004339051.1| porphobilinogen deaminase [Hippea maritima DSM 10411]
gi|327180811|gb|AEA32992.1| porphobilinogen deaminase [Hippea maritima DSM 10411]
Length = 299
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 89/280 (31%), Positives = 139/280 (49%), Gaps = 14/280 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+K +IGTR S LAL A + L D I+P+ T GD+ T++ L ++GGKG
Sbjct: 5 RKQLKIGTRGSKLALWQAEFAKKRLEDK----GFECEIVPIKTSGDK-TDKPLYQLGGKG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIEK L+ ID AVHS KDM + + D + + ++
Sbjct: 60 LFIKEIEKALLDKTIDIAVHSLKDMSVFEDERFDF--IVFERDYWEDIFVSFEGNFLEIK 117
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ +GTSSLRR+A LL++R D +D RG ++TRL KL + + AI+++ +G+KRL
Sbjct: 118 KNARVGTSSLRRRAELLQYRDDFEFVDLRGNLDTRLKKLRDGEVDAIVVSKSGLKRLGLY 177
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ ++ P+ GQG I +E + EL K + E T ++ ERAF+ + +
Sbjct: 178 DEAY-MYDLRFATPAAGQGVIAVEFLSDFEFRDEL-KQLEDEKTRICIDSERAFVRQFNA 235
Query: 243 SCKSAIAGFAYCKGSTLYFY---GIVLASDGKIFHEVSRN 279
SC I A + + G V + + SR
Sbjct: 236 SCNYPIGALARFEQDEFFMQITYGFVDNL--RRVIKYSRR 273
>gi|294637953|ref|ZP_06716220.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685]
gi|291088885|gb|EFE21446.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685]
Length = 230
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 120/206 (58%), Gaps = 2/206 (0%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ RI TR SPLAL A R L + P I ++P+ T+GD + + L ++GGKG
Sbjct: 19 QQTLRIATRQSPLALWQAHYVRDQL--LTHWPQLTIELVPMVTRGDVLLDTPLAKVGGKG 76
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +E+E L+ G D AVHS KD+P GL + PRED RD F+S SL L
Sbjct: 77 LFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICPREDPRDAFVSPHFASLDQLP 136
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ E
Sbjct: 137 PGSIVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGEYDAIILAAAGLKRLQLE 196
Query: 183 KVIKEILNIEDFPPSPGQGAICIETH 208
I+ L E P+ GQGA+ IE
Sbjct: 197 ARIRTPLTAEQSLPAVGQGAVGIECR 222
>gi|302325361|gb|ADL24562.1| hydroxymethylbilane synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 351
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 55/346 (15%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------HNIVIIPLSTKGDR 49
M RI TR S LALA +++ + + ++ ++T+GDR
Sbjct: 1 MSDLKLRIATRKSALALAQTTMVADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD
Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120
Query: 110 FISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
F+S DL + +GT S+RR L R D+ + RG I+TR+ KL +
Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKL--AEL 178
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NPKAQE 216
++LA AG+KR+ + E + E P+ GQG + IET + +
Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIETLNDATVQESRVTGRADLAQ 238
Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY--CKGS----------------- 257
++ +N T+ + E A+L L+ C+ +A FA C+
Sbjct: 239 ILARVNDVATYCIASAEMAYLKALNAGCQFPVASFAEFVCEDGIENRGTCGALEENANRI 298
Query: 258 --TLYFYGIVLASDGKIFHEVSRNGNRC--------DAINIGRDAA 293
TL GI + GN + N+G + A
Sbjct: 299 AQTLKIRGIYWDEKSEKLLRAEVAGNVDLNSEDCVQQSKNLGIELA 344
>gi|225561829|gb|EEH10109.1| porphobilinogen deaminase [Ajellomyces capsulatus G186AR]
Length = 345
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++ +ID VHS KD+PT++ + A +PRED RDV +
Sbjct: 75 NLWTEELEELLLAKQIDLVVHSLKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 134
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L S++GTSS+RR A L R + D RG I+TRL KL+ + A++LA AG+
Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + TL IV + DGK E+ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQGAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKKVADELVVLGAGRIL 333
>gi|325102976|ref|YP_004272630.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145]
gi|324971824|gb|ADY50808.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145]
Length = 532
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 12/264 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ F+IGTR S LAL A S L + + I + T+GD I N L ++ GK
Sbjct: 1 MDRIFKIGTRGSDLALWQANHVASKLNEA----GYQTEIKIIKTQGDNILNLRLDKLEGK 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117
G FT+E+E+ L++G+ID AVHS KD+PT+ GL ISA RED +V +
Sbjct: 57 GFFTKELEEHLLAGDIDLAVHSHKDLPTENPPGLFISAVSEREDPSEVLLILKDCVDTSK 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ + ++GTSS RR++ + R D+ D RG + TR+ KL + AI+LA AG+
Sbjct: 117 KLSVKHNGLVGTSSNRRQSQISSVRPDLEFEDLRGNVNTRIQKLRDENYDAIVLAKAGVS 176
Query: 178 RLKKEKVIKEILNIE---DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV-NCE 233
RL + I IE + P+P QG + ++ + + ++K + H + + E
Sbjct: 177 RLNLDLSEFYIETIEPVAEMIPAPAQGVLAVQIREGDSELDAVLKEVIHNQEVANCISVE 236
Query: 234 RAFLAELDGSCKSAIAGFAYCKGS 257
R L +G C + + +
Sbjct: 237 RKVLNLFNGGCHMPLGSYCKKEDD 260
>gi|291615715|ref|YP_003518457.1| HemC [Pantoea ananatis LMG 20103]
gi|291150745|gb|ADD75329.1| HemC [Pantoea ananatis LMG 20103]
Length = 244
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 124/234 (52%)
Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS 131
++ D AVHS KD+P +GL + R+D RD F+S+ S+ +L +VIGTSS
Sbjct: 1 MLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDELPQGAVIGTSS 60
Query: 132 LRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNI 191
LRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL I++ L
Sbjct: 61 LRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLGLADRIRQPLPA 120
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251
+ P+ GQGA+ IE +++ L++ +NH+DT V ERA L+G C+ I F
Sbjct: 121 DISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVKAERAMNTRLEGGCQVPIGSF 180
Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
A +G L+ G+V A DG + R G R A +G A + + +
Sbjct: 181 AVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGGAREIL 234
>gi|331699360|ref|YP_004335599.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190]
gi|326954049|gb|AEA27746.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190]
Length = 327
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 22/297 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+A + + L H + ++P+ST GDR + + E+G G+F
Sbjct: 5 LRIGTRPSALAMAQSGQIADRLRAA----GHTVELVPVSTVGDR-SGAPVAELG-VGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ + SGE+D A+HS KD+PT L + A RED RD ++ + L +L S
Sbjct: 59 SAVRDAVASGEVDVAIHSYKDLPTAPDPRLTLVAVPGREDPRDALVARDGKVLGELPAGS 118
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L + V+ RG ++TR+ K+ + + +++A AG++RL +
Sbjct: 119 RVGTGSARRTAQLQALGLGLEVVPIRGNVDTRIGKVTSGELDGVIVAAAGLRRLGRIGEA 178
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQEL------VKVINHEDTWDSVNCERAFLAE 239
E+L P+P QGA+ +E P + E +++ +V ERA LA
Sbjct: 179 TELLEPVQMLPAPAQGALAVECRAGVPGSTEHGLALALTALLDDPAARAAVTAERAVLAS 238
Query: 240 LDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
L+ C + I A L +V +DG S G+ DA
Sbjct: 239 LEAGCTAPIGALADVVSDLDDAGRVVDRLSLRAVVGTADGA-LLRASVTGDIDDAEK 294
>gi|154283391|ref|XP_001542491.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1]
gi|150410671|gb|EDN06059.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1]
Length = 345
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 146/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKTTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++ +ID VHS KD+PT++ K + A +PRED RDV +
Sbjct: 75 NLWTEELEELLLAKQIDLVVHSLKDVPTQIPKTCILGAMMPREDPRDVLVIKKGLPNMTL 134
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L S++GTSS+RR A L R + D RG I+TRL KL+ + A++LA AG+
Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLAKLDAQDGPFSALILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + TL IV + DGK E+ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDADGKETLMLRAIVSSVDGKEAVEIEKYEKVTSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
G+ A + + +
Sbjct: 315 VFGKKVADELVVLGAGRIL 333
>gi|239980250|ref|ZP_04702774.1| porphobilinogen deaminase [Streptomyces albus J1074]
Length = 307
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 21/305 (6%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A + + ++ + P + ++ ++T GD L +IGG G+F + + L+ GE
Sbjct: 1 MAQSGQVADAVHQLTGRP---VELVEITTYGDTSR-EHLAQIGGTGVFVAALREALVRGE 56
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
+D AVHS KD+PT L ++A PRED RDV I+ ++L + +GT S RR A
Sbjct: 57 VDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFEELPEGARVGTGSPRRMA 116
Query: 137 LLLRWRSDISV----IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
L + + + RG I+TR+ + + + A++LA AG+ R+ + + E L+++
Sbjct: 117 QLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAGLHRVGRSDEVTEYLSVD 176
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVI----NHEDTWDSVNCERAFLAELDGSCKSAI 248
P+PGQGA+ IE + + + + T +V ER+ LA L+ C + +
Sbjct: 177 TILPAPGQGALAIECAAGHEADGLPLAAVLAELDDPATRAAVTAERSLLAALEAGCSAPV 236
Query: 249 AGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYIRFI 299
A + G+V + DG ++S G +A +G + A +
Sbjct: 237 GALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTGPVPTTHDEAAALGTELAAEMLAK 296
Query: 300 SNKNV 304
+
Sbjct: 297 GAAGL 301
>gi|154508275|ref|ZP_02043917.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC
17982]
gi|153797909|gb|EDN80329.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC
17982]
Length = 344
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 29/334 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI--VIIPLSTKGDRITNRTLTEI 58
M + F +GTR S LALA + ++ + + + + T GD ++ L +
Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRVNLEVVRTHGD-VSAAPLAAL 59
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + +L
Sbjct: 60 GGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAADGATL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------------- 162
L +++GT S RR A +L R D+ V D RG + TRL+++
Sbjct: 120 ASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGADAGTAPSALG 179
Query: 163 -NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKV 220
+ A++LA AG++R+ + ++L+ P+ QGA+ IET + + L+
Sbjct: 180 TGERLDAVVLALAGLRRIGLDAHATDVLDPAIMMPAASQGALAIETRDEDDPLLRALLGT 239
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSR 278
+NH T + + ERA L+ L C + + FA S L V++ DG+ E S
Sbjct: 240 LNHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRERVEASG 299
Query: 279 NGN------RCDAINIGRDAAQYIRFISNKNVFN 306
+ +A +G D + + V +
Sbjct: 300 SLALTDSVGLDEAARLGEDVVRQLLAGGAAEVTD 333
>gi|150398808|ref|YP_001322575.1| porphobilinogen deaminase [Methanococcus vannielii SB]
gi|150011511|gb|ABR53963.1| porphobilinogen deaminase [Methanococcus vannielii SB]
Length = 304
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 18/311 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ S L ++ II + T GD+ N+ L ++G G+F
Sbjct: 2 KLRIGTRGSKLAMIQTKYIASLLNEL----GVETEIIIIKTTGDKDQNKKLADLGI-GVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K++ EID AVHS KD+PT LQI+A RE D+ + + +
Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDLILWNKNSNFNIEYDE 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
++GTSS+RR A L ++ V RG + TR++KL NN+ I++A AG+ R +
Sbjct: 117 LIVGTSSIRRTAFLELSNPNLKVKLLRGNVATRIDKLRNNEYDGIIMAKAGLIRQGIDLS 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+E P+P QG I + + + + E+++ IN + T+ ER L E G C
Sbjct: 177 DFNYEKLEIL-PAPAQGVIGVASRKKDYEINEILEKINDKKTYLEAVAERWSLKEYGGGC 235
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQY 295
++ FA+ L ++ +S+ G + + ++G+
Sbjct: 236 QAPFGAFAFYDFDEGILTLKCDLVKEIHGKKISISKEGFVYCNVNDVELSKDLGKRVGLS 295
Query: 296 IRFISNKNVFN 306
+ ++F
Sbjct: 296 FKE---SDIFE 303
>gi|300741887|ref|ZP_07071908.1| hydroxymethylbilane synthase [Rothia dentocariosa M567]
gi|300381072|gb|EFJ77634.1| hydroxymethylbilane synthase [Rothia dentocariosa M567]
Length = 371
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 95/367 (25%), Positives = 146/367 (39%), Gaps = 65/367 (17%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSL--------MDVHKIPPHNIVIIPLSTKGDRITN 52
M P+ +GTR S LAL + + + + I + T GD +
Sbjct: 1 MSD-PYILGTRGSALALTQSTLAAEHIVQVFNAHSREHGAERTLSFDITTVKTDGD-VLT 58
Query: 53 RTLTEIGGKGLFTEEIEKKLISGEI----DCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108
L +GG G+F + ++L+ G+ D AVHS KD+P + GL I+A L RED RD
Sbjct: 59 GPLATLGGTGVFAAALRQRLLDGDTPGGVDVAVHSLKDLPAEPCPGLVIAAILEREDPRD 118
Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------- 161
++ +L L + +GT S RR A + R D+ ++D RG + TR+ ++
Sbjct: 119 ALVARDNLTLDTLPTGARVGTGSPRRAAQVRALRPDLEIVDIRGNVGTRIARVKGLEEHG 178
Query: 162 -----------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198
N A++LA +G+KRL KE VI E L+ P+P
Sbjct: 179 NRQVVVRDSTETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPAP 238
Query: 199 GQGAICIETHVNNPKAQELVK------------------VINHEDTWDSVNCERAFLAEL 240
GQGA+ IE + +H +T V ER L L
Sbjct: 239 GQGALAIEVRETEFVNPDTATLFDPEISQPVRTLGEALIAADHFETHLEVTAERRLLRRL 298
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-VSRNGNRC--DAINIGRDAAQYIR 297
+ C + I +A K L +V + DG S G A +G A+ +
Sbjct: 299 EAGCAAPIGAYATVKDGDLVLTAVVASPDGTESLRHTSATGELDVPGAERLGIRVAEDLL 358
Query: 298 FISNKNV 304
+ +
Sbjct: 359 QMGAAAL 365
>gi|169614115|ref|XP_001800474.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15]
gi|111061407|gb|EAT82527.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15]
Length = 397
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 101/346 (29%), Positives = 148/346 (42%), Gaps = 47/346 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---- 60
P IGTR S LA A ++L H P I P+ +GDR L ++
Sbjct: 30 PVNIGTRNSTLAQIQARAVAAALKSAH--PERTYNICPVVVEGDRDKITPLQQLSQGENA 87
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116
K L+T E+E L G++D VH KDMPT+L L++ A L RED RD +
Sbjct: 88 KSLWTGELETMLEKGDLDIIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPGDT 147
Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174
+L L + IGTSS+RR A L R + D RG + TRL KL+ AI+LA A
Sbjct: 148 TLATLPQGATIGTSSVRRAAQLRRLYPHLQFADLRGNVGTRLGKLDKEDSPYSAIILAAA 207
Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
G++R+ E I + L+ + GQGA+ IE ++ + L+ I E T + +
Sbjct: 208 GLRRMGLESRITQYLDSATGGMLHAVGQGALAIEIRKDDETMKALLNKIACERTTRACSA 267
Query: 233 ERAFLAELDGSCKSAIAGFAYC------------------------------KGSTLYFY 262
ERA L L+G C I L
Sbjct: 268 ERALLRALEGGCSVPIGIETSWRGGKGLAVGAQPAKDYDKHGNAVEEAEPDLDDQELVMK 327
Query: 263 GIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+V++ DGK E V + ++ +A +GR+ A+ + +
Sbjct: 328 TMVVSVDGKDAVEHDAVRKVRSKEEAEEMGREVAKILIEKGADQIL 373
>gi|45358435|ref|NP_987992.1| porphobilinogen deaminase [Methanococcus maripaludis S2]
gi|44921193|emb|CAF30428.1| Porphobilinogen deaminase [Methanococcus maripaludis S2]
Length = 304
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 84/303 (27%), Positives = 134/303 (44%), Gaps = 15/303 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+F
Sbjct: 2 KLRIGTRGSTLAMVQTEYIAGLLNDL----DIETEIIIVKTTGDKDQNKKLADLGI-GVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDE 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSS+RR + L +++ RG + TR+NKL N + I++A AG+ R +
Sbjct: 117 LNVGTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGIDLS 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P+P QG I + + + K ++++ I + T+ ER L E G C
Sbjct: 177 EFNYKKLDIL-PAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGC 235
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQY 295
++ FA + L ++ G I S G + + +G
Sbjct: 236 QAPFGAFAIYDTEEGILNLRCELVDEQGTIKRVKSNEGFVICTTDDVELSKELGARVGAS 295
Query: 296 IRF 298
+
Sbjct: 296 FKE 298
>gi|313901219|ref|ZP_07834707.1| hydroxymethylbilane synthase [Clostridium sp. HGF2]
gi|312954177|gb|EFR35857.1| hydroxymethylbilane synthase [Clostridium sp. HGF2]
Length = 299
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 107/277 (38%), Positives = 153/277 (55%), Gaps = 2/277 (0%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+GTR S LALA E ++ L + P H+ I ++TKGDRI + L ++ KG+F
Sbjct: 3 IRMGTRGSALALAQCNEVKALLEKAY--PQHSFEICVITTKGDRIQHVALDQMKDKGIFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE++L+ ID AVHS KDMP+ L + L + L RED RDV + A SL+ L LH+
Sbjct: 61 KEIEQQLLEHTIDLAVHSMKDMPSVLDERLCFTETLLREDARDVLVLRNAASLESLPLHA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I T S RR+ LLR R D+ ++ RG IETRL KL + + I+LA AG+KRL+ + I
Sbjct: 121 RIATGSKRRRFQLLRQREDLEIVGIRGNIETRLKKLEDQQLDGIVLAAAGLKRLQLAQYI 180
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ L P+ QGAI IE H ELV + + + V ERAFL EL+G C
Sbjct: 181 TQTLPEHIMVPAVAQGAIAIEVHKKRNDLVELVNALCTKRVDEEVCAERAFLQELNGGCH 240
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+ + + + + + DG ++ +G R
Sbjct: 241 TPLGARCILHEADAELFAVYGSEDGTRLFDLHVSGPR 277
>gi|269958021|ref|YP_003327810.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894]
gi|269306702|gb|ACZ32252.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894]
Length = 343
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 141/313 (45%), Gaps = 18/313 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+GTR S LA + L ++ P + ++ + T GD + +L +GG G+F
Sbjct: 7 PLRLGTRASLLATTQSGLVAKRLEELTGRP---VELVHIRTDGD-VLTGSLASLGGTGVF 62
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ D AVHS KD+PT ++GL RED RD + +L L
Sbjct: 63 VAALREALLDDRCDVAVHSLKDLPTAAVEGLTFVT-PEREDPRDALCARDGLTLDTLPRG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182
+ IGT S RR A L R D+ V+D RG ++TRL + + A++LA +G+ RL +
Sbjct: 122 ARIGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLKRALGPDADLDAVVLACSGLARLGRT 181
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLA 238
+ + L+ P+PGQGA+ +E + ++H T SV ERA LA
Sbjct: 182 DTVTQALDPAVVAPAPGQGALAVEARTTDLAPGGPLAAAFAALDHRATRLSVTAERAVLA 241
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-------RNGNRCDAINIGRD 291
L+ C + + A L +V DG +G+ A ++G
Sbjct: 242 RLEAGCAAPVGALARVDEGQLTLTAVVARVDGTEKLRHRASVALGAISGDDDAARDLGVR 301
Query: 292 AAQYIRFISNKNV 304
A+ + ++
Sbjct: 302 VAEALLADGAADL 314
>gi|225684419|gb|EEH22703.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb03]
Length = 347
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 141/313 (45%), Gaps = 19/313 (6%)
Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70
R S LAL RSSL P + + T GD L E K L+TEE+E+
Sbjct: 26 RKSKLALLQTDLIRSSLKAA--WPEYEFRVHSQDTAGDLNKVTPLREFTTKNLWTEELEE 83
Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK---DLALHSVI 127
L++ +ID VHS KD+PT+L K + A +PRED RDV + +L SV+
Sbjct: 84 LLVAKKIDFVVHSLKDVPTQLPKPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVV 143
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVI 185
GTSS+RR A L R + D RG IETRL KL+ + I+LA AG+ R + I
Sbjct: 144 GTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARI 203
Query: 186 KEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
L+ ++ + GQGA+ +E ++ + + +++ I + ER+ L L+G
Sbjct: 204 SHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGG 263
Query: 244 CKSAIAGFAYCKGST-------LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293
C + + L IV + DGK EV + +A G+ A
Sbjct: 264 CSAPLGVETEWVKGEGQGEVEKLRLRAIVASVDGKEAVEVEMEAEIRSEAEAEGFGKTVA 323
Query: 294 QYIRFISNKNVFN 306
+ + +
Sbjct: 324 EELIVKGAGKILE 336
>gi|145525120|ref|XP_001448382.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415926|emb|CAK80985.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 15/310 (4%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGG 60
++ RI TR S LA+A S L II +S + GD L ++
Sbjct: 1 MQRQLRIATRSSALAMAQTNYVISELKQ-------ECEIIKVSNEVGDVNLQDPLYQMPT 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117
G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +S
Sbjct: 54 VGVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLHLAAYTKFEQRGDVVLLNKKYNYKS 113
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L +L +GTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI
Sbjct: 114 LSELPDGLKVGTSSLRRIATIRSRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGIL 173
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
RL + I L+ ++F +P Q A+ I+ ++ + ++++N D ER FL
Sbjct: 174 RLGLAEKISFDLDEKEFLYAPAQAALGIQCRKDDLETIGRLQILNDTDAQKRCVAERMFL 233
Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L+G C+ IA ++ C + +Y G VLA DG E +G+ + I
Sbjct: 234 NLLEGGCRLPIAVYSECREDGQVYIKGRVLAVDGSKVIEDEA---LDHFEIVGQILCEKI 290
Query: 297 RFISNKNVFN 306
+ + +
Sbjct: 291 KVLGGVELIE 300
>gi|58699644|ref|ZP_00374329.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58533839|gb|EAL58153.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 267
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 104/263 (39%), Positives = 148/263 (56%), Gaps = 6/263 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF
Sbjct: 3 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L +
Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I
Sbjct: 121 TIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC
Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237
Query: 246 SAIAGFAY-CKGSTLYFYGIVLA 267
+ +A A + LY V
Sbjct: 238 TPLAALAEYVSENMLYLSLYVGR 260
>gi|67989478|ref|NP_001018179.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe 972h-]
gi|12644400|sp|Q09899|HEM3_SCHPO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|5834802|emb|CAB55280.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe]
Length = 336
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 18/315 (5%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---KGLF 64
IGTR S LA+ + R L + P II T GD I ++ L E K L+
Sbjct: 9 IGTRKSKLAVIQSEIIREELEKHY--PHLEFPIISRDTIGDEILSKALFEFKRQLAKSLW 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L++ + VHS KD+P+++ G+ I+ R D + +++ DL
Sbjct: 67 TRELEALLVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIVFKAGSHYKTVADL 126
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
SV+GTSS+RR+ALL R + +D RG + TRL KL+ +++ ++LA AG+ RL
Sbjct: 127 PPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRL 186
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L + GQGA+ +E ++ + E++K + H++T + ERA +
Sbjct: 187 GLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKR 246
Query: 240 LDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRD 291
L G C I + G VL++DG + + +A +G
Sbjct: 247 LQGGCAIPIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGIT 306
Query: 292 AAQYIRFISNKNVFN 306
A + +
Sbjct: 307 VALALLKNGAGPILE 321
>gi|260905127|ref|ZP_05913449.1| glutamyl-tRNA reductase [Brevibacterium linens BL2]
Length = 825
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 40/336 (11%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA + + L + + I+ + T+GD + LT GG
Sbjct: 475 SGRTIRLGTRRSKLARSQSTAIAHQLAALTGW---RVEIVEVVTEGDVNMS-PLTGFGGT 530
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + + L G+ID AVHS KD+PT G+Q++A PR D DV I S +L
Sbjct: 531 GVFVSAVRQALHQGKIDIAVHSLKDLPTTPEAGIQMAAIPPRVDPADVLIGRDGLSFAEL 590
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GT S RR L R DI V RG ++TR+ + + + A++LA AG++R+ +
Sbjct: 591 PAGSVVGTGSPRRAVQLRAARPDIEVRGVRGNVDTRIAHVRDGRLDAVVLAAAGVRRIGR 650
Query: 182 EKVIKEILNIEDFPPSPGQGAICIET-------------HVNNPKAQELVKVINHEDTWD 228
+ L+ + P+PGQGA+ +ET + + + +K ++ E T
Sbjct: 651 LAEATDSLDFDTMLPAPGQGALAVETRGADSPFALDNEVMEADAEVRTQLKRLHDETTDL 710
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---------- 278
+V CERA L+ + C + I A +GS ++ DGK+
Sbjct: 711 AVTCERAILSRAEAGCSAPIGALATIQGSDFVVDAVMADDDGKLARTRQVAPLPTTPDVD 770
Query: 279 --NGNRCD-----------AINIGRDAAQYIRFISN 301
+G+ A +G AA+ +
Sbjct: 771 LDSGSANQLSITGKELARLADELGTAAAEDLLGQLG 806
>gi|50841792|ref|YP_055019.1| porphobilinogen deaminase [Propionibacterium acnes KPA171202]
gi|289424694|ref|ZP_06426477.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187]
gi|289428901|ref|ZP_06430581.1| hydroxymethylbilane synthase [Propionibacterium acnes J165]
gi|295129869|ref|YP_003580532.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137]
gi|50839394|gb|AAT82061.1| porphobilinogen deaminase, HemC [Propionibacterium acnes KPA171202]
gi|289155391|gb|EFD04073.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187]
gi|289157902|gb|EFD06125.1| hydroxymethylbilane synthase [Propionibacterium acnes J165]
gi|291376805|gb|ADE00660.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137]
Length = 366
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 93/333 (27%), Positives = 142/333 (42%), Gaps = 34/333 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LA + L ++ + ++T GD + +L +GG
Sbjct: 33 MS--AIRLGTRASTLATTQSEMVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGG 85
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L D
Sbjct: 86 IGVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHD 145
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170
L + +GT S RR A LL R D++++D RG ++TRL ++ A++
Sbjct: 146 LPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVV 205
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227
LA +G+ RL + E L+ P+P QGA+ +E + + +L I+ T
Sbjct: 206 LAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTR 265
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHE------ 275
+ ERA L+ L+ C + I A K L +V A DG
Sbjct: 266 LAATAERAVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVE 325
Query: 276 --VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
A +G AA+ + +V +
Sbjct: 326 LPAEVEPALAAAHTLGVTAAEELLDDGAADVAD 358
>gi|55976374|sp|Q6AB05|HEM3_PROAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|313772844|gb|EFS38810.1| porphobilinogen deaminase [Propionibacterium acnes HL074PA1]
gi|313802779|gb|EFS43997.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA2]
gi|313806434|gb|EFS44941.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA2]
gi|313810983|gb|EFS48697.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA1]
gi|313815286|gb|EFS53000.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA1]
gi|313817301|gb|EFS55015.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA2]
gi|313824153|gb|EFS61867.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA2]
gi|313826520|gb|EFS64234.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA1]
gi|313828701|gb|EFS66415.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA2]
gi|313831749|gb|EFS69463.1| porphobilinogen deaminase [Propionibacterium acnes HL007PA1]
gi|313840063|gb|EFS77777.1| porphobilinogen deaminase [Propionibacterium acnes HL086PA1]
gi|314916105|gb|EFS79936.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA4]
gi|314917026|gb|EFS80857.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA1]
gi|314921302|gb|EFS85133.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA3]
gi|314955012|gb|EFS99418.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA1]
gi|314959051|gb|EFT03153.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA1]
gi|314961324|gb|EFT05425.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA2]
gi|314977093|gb|EFT21188.1| porphobilinogen deaminase [Propionibacterium acnes HL045PA1]
gi|314989126|gb|EFT33217.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA3]
gi|315078439|gb|EFT50470.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA2]
gi|315082761|gb|EFT54737.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA2]
gi|315086120|gb|EFT58096.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA3]
gi|315087704|gb|EFT59680.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA1]
gi|315102048|gb|EFT74024.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA1]
gi|327331372|gb|EGE73111.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA2]
gi|327333359|gb|EGE75079.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA3]
gi|327334882|gb|EGE76593.1| hydroxymethylbilane synthase [Propionibacterium acnes HL097PA1]
gi|327449721|gb|EGE96375.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA2]
gi|327454571|gb|EGF01226.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA3]
gi|327456643|gb|EGF03298.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA2]
gi|328755626|gb|EGF69242.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA1]
gi|328756706|gb|EGF70322.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA2]
gi|328761895|gb|EGF75405.1| hydroxymethylbilane synthase [Propionibacterium acnes HL099PA1]
gi|332674709|gb|AEE71525.1| porphobilinogen deaminase [Propionibacterium acnes 266]
Length = 334
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 93/333 (27%), Positives = 142/333 (42%), Gaps = 34/333 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LA + L ++ + ++T GD + +L +GG
Sbjct: 1 MS--AIRLGTRASTLATTQSEMVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGG 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L D
Sbjct: 54 IGVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHD 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170
L + +GT S RR A LL R D++++D RG ++TRL ++ A++
Sbjct: 114 LPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVV 173
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227
LA +G+ RL + E L+ P+P QGA+ +E + + +L I+ T
Sbjct: 174 LAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTR 233
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHE------ 275
+ ERA L+ L+ C + I A K L +V A DG
Sbjct: 234 LAATAERAVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVE 293
Query: 276 --VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
A +G AA+ + +V +
Sbjct: 294 LPAEVEPALAAAHTLGVTAAEELLDDGAADVAD 326
>gi|156937477|ref|YP_001435273.1| porphobilinogen deaminase [Ignicoccus hospitalis KIN4/I]
gi|166217774|sp|A8AAB4|HEM3_IGNH4 RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|156566461|gb|ABU81866.1| hydroxymethylbilane synthase [Ignicoccus hospitalis KIN4/I]
Length = 304
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 105/298 (35%), Positives = 149/298 (50%), Gaps = 9/298 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGGKG 62
+I R S L+L S L+ P +I + T GD+ L + G G
Sbjct: 2 KIKIAARGSKLSLKQVSMFTSYLLKF--FPDLEYEVITVKTTGDKANAPFEELAKRGLTG 59
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-KDL 121
LF +E+ K ++ G+ D AVHS KD+PT+L L+I+A+LPR+ DV IS DL
Sbjct: 60 LFEKEVNKAVLEGKADVAVHSLKDLPTELDPRLEIAAFLPRDPPYDVLISRAGNYDIFDL 119
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
SV+GTSS RRKAL+ R D+ V D RG ++TRL KL + AI+LA AG+ RL
Sbjct: 120 PKGSVVGTSSARRKALIKNLRPDLVVKDLRGNVDTRLEKLRRGEYDAIVLAEAGVSRLG- 178
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
V L+ FPPSPGQG I T + +L+K I+ + ER L E
Sbjct: 179 LNVDYVRLDWRLFPPSPGQGIIVAVTR-KGSEISDLLKSISDVKSEKLATAERTVLKEFG 237
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C A+ A+ +GS + VL+ G+ +V G +G AA+ ++ +
Sbjct: 238 GGCFVALGAIAFEEGSLIRLRATVLSPSGRERVDVELIGKG--PEEVGMRAAERLKAL 293
>gi|159906164|ref|YP_001549826.1| porphobilinogen deaminase [Methanococcus maripaludis C6]
gi|159887657|gb|ABX02594.1| porphobilinogen deaminase [Methanococcus maripaludis C6]
Length = 304
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 85/302 (28%), Positives = 133/302 (44%), Gaps = 15/302 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+FT
Sbjct: 3 LRIGTRGSTLAMIQTEYIAGLLNDL----GVETEIIIVKTTGDKDQNKKLVDLGI-GVFT 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQIAATPKRESPDDIIIWRKDSDFDIEHDEL 117
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSS+RR + L +++ RG + TR++KL + I++A AG+ R +
Sbjct: 118 NVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRKGEYDTIIMAKAGLIRQGIDLSE 177
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+E P+P QG I + + + K E+++ I + T+ ER L E G C+
Sbjct: 178 FNYKKLEIL-PAPAQGVIGVASRKADAKINEILEKICDKKTYIEATAERWALKEYGGGCQ 236
Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQYI 296
+ FA + L ++ G I S G + A +G
Sbjct: 237 APFGAFANYDTEAGILNLRCELVDEQGTIKRVKSNEGFIFCNTDDVELAKELGARVGALF 296
Query: 297 RF 298
+
Sbjct: 297 KE 298
>gi|220913234|ref|YP_002488543.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6]
gi|219860112|gb|ACL40454.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6]
Length = 332
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 97/331 (29%), Positives = 158/331 (47%), Gaps = 33/331 (9%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL +T L V P + ++ + T GD + L+++GG G+F
Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIRTDGD-VLTGPLSQMGGTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ E D AVHS KD+PT GL ++A R D+RDV + L DL
Sbjct: 58 VAALRDALLRNECDVAVHSLKDLPTGAAVGLSLAATPKRVDVRDVLCARDGLKLADLPAG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NNNKAHAIL 170
+ +GT S RR A L R+D+ ++D RG ++TRL ++ + A++
Sbjct: 118 AKVGTGSPRRAAQLRAARADLEIVDIRGNVDTRLGRVPGLPGNATNEVVPGKSCDLDAVV 177
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ------------ELV 218
LA AG++R+ + + E L + P+ GQG++ IE+ + + + +
Sbjct: 178 LAAAGLERISRLDAVSEYLEPDVMLPAAGQGSLAIESRTADAPRKPGSTEGSQEVLAQAL 237
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
++ DT +V ERA LA L+ C + + +AY KGS L+ +V A DGK R
Sbjct: 238 AALDDPDTRLAVTAERALLARLEAGCAAPVGAYAYRKGSMLHLEAVVCAVDGKASVRDKR 297
Query: 279 -NGNRCD--AINIGRDAAQYIRFISNKNVFN 306
+ A +G + A+ + ++ +
Sbjct: 298 ATDGLTEVGATLLGIELAEVLLAGGAADIAD 328
>gi|150402047|ref|YP_001329341.1| porphobilinogen deaminase [Methanococcus maripaludis C7]
gi|150033077|gb|ABR65190.1| porphobilinogen deaminase [Methanococcus maripaludis C7]
Length = 304
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 15/303 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ L D+ I+ + T GD+ + L ++G G+F
Sbjct: 2 KLRIGTRGSTLAMVQTEYIAGLLNDL----GVETEIVIVKTTGDKDQTKKLVDLG-LGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T+E++ K++ EID AVHS KD+PT LQI+A RE D+ I
Sbjct: 57 TKELDSKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDSDFDIEHDE 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSS+RR + L +++ RG + TR++KL N + I++A AG+ R +
Sbjct: 117 LDVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRNREYDTIIMAKAGLIRQGIDLS 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
++ P+P QG I + + + K E+++ I + T+ ER L E G C
Sbjct: 177 EFNYTKLDML-PAPAQGVIGVASRKADIKINEILEKICDKKTYIEATAERWALKEYGGGC 235
Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQY 295
++ FA + L ++ G I S G A +G
Sbjct: 236 QAPFGAFAVYDTEDGILNLRCELVDEQGTIKRVKSNEGFVICTTDEVELAKELGARVGAL 295
Query: 296 IRF 298
+
Sbjct: 296 FKE 298
>gi|261417417|ref|YP_003251100.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373873|gb|ACX76618.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 351
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 55/346 (15%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------HNIVIIPLSTKGDR 49
M RI TR S LALA +++ + + ++ ++T+GDR
Sbjct: 1 MSDLKLRIATRKSALALAQTTMAADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109
+++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD
Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120
Query: 110 FISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166
F+S DL + +GT S+RR L R D+ + RG I+TR+ KL +
Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKL--AEL 178
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NPKAQE 216
++LA AG+KR+ + E + E P+ GQG + IET + +
Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIETLNDATVQESRVTGRADLAQ 238
Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY--CKGS----------------- 257
++ +N T+ + E A+L L+ C+ +A FA C+
Sbjct: 239 ILARVNDVATYCIASAEMAYLKALNAGCQFPVASFAEFVCEDGIENRGTCGALEENANRI 298
Query: 258 --TLYFYGIVLASDGKIFHEVSRNGNRC--------DAINIGRDAA 293
TL GI + GN + N+G + A
Sbjct: 299 AQTLKIRGIYWDEKSEKLLRAEVAGNVDLNSEDCVQQSKNLGIELA 344
>gi|325091275|gb|EGC44585.1| porphobilinogen deaminase [Ajellomyces capsulatus H88]
Length = 352
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 144/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 24 TKSTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 81
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV +
Sbjct: 82 NLWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 141
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L S++GTSS+RR A L R + D RG I+TRL KL+ + A++LA AG+
Sbjct: 142 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 201
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 202 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 261
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + TL IV + DGK E+ + +A
Sbjct: 262 NLLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 321
Query: 287 NIGRDAAQYIRFISNKNVF 305
+ A + + +
Sbjct: 322 VFAKKVADELVVLGAGRIL 340
>gi|240275436|gb|EER38950.1| porphobilinogen deaminase [Ajellomyces capsulatus H143]
Length = 345
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 144/319 (45%), Gaps = 17/319 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K F IGTR S LAL R +L P + I+ D L E K
Sbjct: 17 TKSTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV +
Sbjct: 75 NLWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 134
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L S++GTSS+RR A L R + D RG I+TRL KL+ + A++LA AG+
Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 194
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER
Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254
Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286
L L+G C + + TL IV + DGK E+ + +A
Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 314
Query: 287 NIGRDAAQYIRFISNKNVF 305
+ A + + +
Sbjct: 315 VFAKKVADELVVLGAGRIL 333
>gi|47224902|emb|CAG06472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 98/359 (27%), Positives = 141/359 (39%), Gaps = 99/359 (27%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ RIGTR S LA L +++ P ++ I+ +ST GD+I + L++IG K L
Sbjct: 18 RVIRIGTRKSQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSL 75
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H ++L
Sbjct: 76 FTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDA 135
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF------------------------RGKIET 156
L HSVIGTSSLRR A L + + D RG + T
Sbjct: 136 LPAHSVIGTSSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNT 195
Query: 157 RLNKLN-NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
RL KL+ AI+LA AG++R+ + I +IL ED + GQ
Sbjct: 196 RLKKLDEKEDFAAIILAAAGLRRMGWDNRISQILEPEDCMYAVGQ--------------- 240
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
+G C +A K S LY G V + DG +
Sbjct: 241 -------------------------EGGCSVPVAVHTKVKDSQLYLTGAVYSLDGSDSLK 275
Query: 276 VSR--------NGNRCD---------------------AINIGRDAAQYIRFISNKNVF 305
+ +G+ + A +G D A+ + K +
Sbjct: 276 ETMQTSVAAPADGSPDEVDECARVGVTANKIPGEAQDRAERLGVDLAKLLLSKGAKEIL 334
>gi|47206204|emb|CAF91821.1| unnamed protein product [Tetraodon nigroviridis]
Length = 385
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 107/378 (28%), Positives = 155/378 (41%), Gaps = 87/378 (23%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT+E+E L
Sbjct: 1 SQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSLFTKELENAL 58
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGT 129
E+D VHS KD+PT L G I A L RE+ D + H ++L L HSVIGT
Sbjct: 59 ERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGT 118
Query: 130 SSLRRKALLLRWRSDISVIDF------------------------RGKIETRLNKLNN-N 164
SSLRR A L + + D RG + TRL KL+
Sbjct: 119 SSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKE 178
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
AI+LA AG++R+ + I +IL ED + GQGA+ +E + E+V V++
Sbjct: 179 DFAAIILAAAGLRRMGWDNRISQILEPEDCMYAVGQGALAVEVRAKDADILEMVSVLHDP 238
Query: 225 DTWDSVNCERAFLAEL----------------------------DGSCKSAIAGFAYCKG 256
DT ERAFL L +G C +A K
Sbjct: 239 DTVLRCIAERAFLKHLVQHTHTHTHTHTHTRSLAVAHWNLFCLQEGGCSVPVAVHTKVKD 298
Query: 257 STLYFYGIVLASDGKIFHEVSR--------NGNRCD---------------------AIN 287
S LY G V + DG + + +G+ + A
Sbjct: 299 SQLYLTGAVYSLDGSDSLKETMQTSVAAPADGSPDEVDECARVGVTANKIPGEAQDRAER 358
Query: 288 IGRDAAQYIRFISNKNVF 305
+G D A+ + K +
Sbjct: 359 LGVDLAKLLLSKGAKEIL 376
>gi|27377509|ref|NP_769038.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110]
gi|27350653|dbj|BAC47663.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110]
Length = 313
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 84/310 (27%), Positives = 131/310 (42%), Gaps = 20/310 (6%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTEEIEKKLI 73
+ALA E L +P ++ I+ T GD L GGKG F +I ++
Sbjct: 1 MALAQTEEIARRLTAA--VPGLDVEIVKFDTTGDLDQTSKLLPHGGKGGAFVAQIRAAVL 58
Query: 74 SGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHT----AQSLKDLALHSVIG 128
SGE+ A+HS KDMP + GL I A L R+ D + + IG
Sbjct: 59 SGELQAAMHSLKDMPGNEDTPGLVIGATLSRDPPSDALVLRDGVTLEALRQSRGKGFKIG 118
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN------------KAHAILLAYAGI 176
T+++RR A R D+ VI FRG +TR+ KL+N A A+++A +G+
Sbjct: 119 TNAVRRAAYARRLFPDVEVIHFRGAADTRVRKLDNGEKQRLPDGGAVGPADALIMARSGL 178
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ I + P+ GQG + +E + + ++++ I+ + ER
Sbjct: 179 DRVGLASRIAYEFTPAEMLPAAGQGIVAVECAAQDWQTRKILSSIDDPAAHACADAEREV 238
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L L+G C S +AGF+ G + VL G E SR G+ +GR +
Sbjct: 239 LWVLNGHCNSPVAGFSTIAGDQMSLTASVLDLSGNTIIEASRTGSANRPRELGRAVGLEL 298
Query: 297 RFISNKNVFN 306
+
Sbjct: 299 LGKGAAEIIE 308
>gi|217077158|ref|YP_002334874.1| porphobilinogen deaminase [Thermosipho africanus TCF52B]
gi|217037011|gb|ACJ75533.1| porphobilinogen deaminase [Thermosipho africanus TCF52B]
Length = 280
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 97/288 (33%), Positives = 142/288 (49%), Gaps = 15/288 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
++GTR S LAL L K+ + +IP+ TKGD + + + EIGGKG+F
Sbjct: 2 KIKVGTRGSKLALIQTNMVVERLKS--KLSNVSFEVIPIKTKGDIVK-KPVGEIGGKGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+IEK L++GEID A+HS KDMP+K+ GL +++ L RED RDVF+ L +
Sbjct: 59 VSDIEKLLLNGEIDIAIHSMKDMPSKIPDGLYLTSVLKREDARDVFVGKKDFFLLE--SG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS RR L R DI ++ RG ++TRL ++ + I+LA AG+KRL EK
Sbjct: 117 AKIGTSSKRRMLQLSILRPDIEIVPIRGNVDTRLKRI--GELDGIVLAAAGLKRLGLEKK 174
Query: 185 IKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I +IE P+P QG + +E T P +++ I DT ER L+
Sbjct: 175 ITNYFSIEQVVPAPCQGILALEFTSKFLPLFEKVKDEIVDPDTEFVSKIERKVLSISGFD 234
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN-IGR 290
C + + L F+ K ++ A +G
Sbjct: 235 CNTPFGFYCEKNDDNLVFHIF------KNEKRERLVADKERAYEVLGE 276
>gi|163784391|ref|ZP_02179282.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880338|gb|EDP73951.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 185
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 83/186 (44%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL A L P + +I ++TKGD+I + L ++GGKGLF
Sbjct: 2 KIRIGTRKSKLALWQANFVAEQLKK--HFPELEVELIKITTKGDKILDVPLAKVGGKGLF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S SLK+L
Sbjct: 60 VKEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITKREDPRDAFLSVKYSSLKELPEG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRRK L R D+ + D RG ++TR+ KL + A++LAYAG+KRL E
Sbjct: 120 AVVGTSSLRRKVQLKINRPDLQIKDLRGNVDTRIRKLEEGQYDAVILAYAGLKRLGLEDK 179
Query: 185 IKEILN 190
+K++ +
Sbjct: 180 VKQVFS 185
>gi|296109592|ref|YP_003616541.1| porphobilinogen deaminase [Methanocaldococcus infernus ME]
gi|295434406|gb|ADG13577.1| porphobilinogen deaminase [Methanocaldococcus infernus ME]
Length = 287
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 138/296 (46%), Gaps = 17/296 (5%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LAL A L + + + + T+GD+I +R L IG G+FT
Sbjct: 1 MIIGSRGSKLALYQANLVLKKLKSL----GIDGEVKIIKTRGDQIKDRALHSIGI-GVFT 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E++ L++ EID AVHS KD+PT L L R+ D+ I++
Sbjct: 56 KELDLSLLNHEIDIAVHSLKDIPTVWNSRL-SYVVLERDYPNDLLIANKEDI-------K 107
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR+A L D RG ++TRL KL +N+ AI+L+ AG++RL +
Sbjct: 108 VIGTSSLRRRAFLKELYRDAEFKLLRGNVDTRLRKLKDNEYDAIVLSEAGVRRLNIDLSE 167
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ + P+PGQG I + + K + +++ IN + T+ ER L EL C
Sbjct: 168 FLVYKLPIL-PAPGQGVIAVAYRKEDEKIKNILEKINDKKTFLETTAERKALNELGCGCH 226
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298
FA +G L V D I E S + A +G + +R
Sbjct: 227 VPFGAFAKYEGKRLMLKVAVANKDRVIKKESSICCEVDEIEKAEKLGESLGRELRR 282
>gi|114640812|ref|XP_001149046.1| PREDICTED: porphobilinogen deaminase [Pan troglodytes]
Length = 276
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 89/243 (36%), Positives = 130/243 (53%), Gaps = 6/243 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVTTLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177
+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237
R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL
Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254
Query: 238 AEL 240
L
Sbjct: 255 RHL 257
>gi|323358316|ref|YP_004224712.1| porphobilinogen deaminase [Microbacterium testaceum StLB037]
gi|323274687|dbj|BAJ74832.1| porphobilinogen deaminase [Microbacterium testaceum StLB037]
Length = 372
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 88/282 (31%), Positives = 144/282 (51%), Gaps = 8/282 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P R+GTR S LALA + ++ + ++P+ ++GD +L+++GG
Sbjct: 1 MSA-PLRLGTRRSALALAQSQMVADAVAAAS---GREVELVPIVSEGDVNR-ASLSQLGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+F + + L +G D VHS KD+PT +GL I+A PRED RDV I+ L
Sbjct: 56 RGVFANGLREALAAGRCDFLVHSLKDLPTAQPEGLVIAATPPREDARDVVITRDGTPLHA 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A LR + + D RG +++RL ++ + + A++LA AG+ RL
Sbjct: 116 LEAGARVGTGSPRRIAQALRHNPRLDIRDIRGNVDSRLARVRDGELDAVILAAAGLSRLG 175
Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFL 237
E + E L + ++P +PGQG++ +ET + + ++ E T ++ ER L
Sbjct: 176 GELGGLQSEPLGLAEWPTAPGQGSLAVETRTDIDADILAALSALDDEVTRAAITAERTVL 235
Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
+ LD C + + A L +V A DG + R
Sbjct: 236 SVLDAGCHAPVGTHASIVDGDLRLRAVVYALDGAHRIGIDRT 277
>gi|297627045|ref|YP_003688808.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922810|emb|CBL57388.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 310
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 89/303 (29%), Positives = 144/303 (47%), Gaps = 11/303 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++ +IGTR S LA + + T + + V +P ++ + T GD + L+ G
Sbjct: 12 RRVLKIGTRGSRLARSQSAMTAALIEQVTGLP---TELVIVHTDGD-DLSIPLSAPPRPG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F + L+ GE+D AVHS KD+P + GL + A R D +S A L +L
Sbjct: 68 AFVARLRDVLLDGEVDIAVHSFKDLPFAPMPGLSVVAVPQRAAALDALVSRDALGLDELP 127
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
S +GTSS RR + LLR+R D+ ++ RG ++TR+ K+ + A +LA AG++RL
Sbjct: 128 AGSKVGTSSPRRASALLRYRDDLEIVPIRGNVDTRIRKVREGRVDAAVLAAAGLERLGLH 187
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+++ + P+P QGA+ +E ++P V IN DT V ER L +
Sbjct: 188 DEITELIDPKVIVPAPAQGALAVEMRTDDP-LAATVAQINDHDTRIQVAAERQVLTGVQA 246
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG------KIFHEVSRNGNRCDAINIGRDAAQYI 296
+C +AI + +G +L + G + R DA +G A+ +
Sbjct: 247 TCTTAIGAHSVLQGYSLTLMADLTDHMGVAHAHVARTIGLRRGDPTDDARALGESVAEQL 306
Query: 297 RFI 299
Sbjct: 307 LER 309
>gi|284047684|ref|YP_003398023.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731]
gi|283951905|gb|ADB46708.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731]
Length = 288
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 16/300 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K + TR S LALA L + I ++T GDR L +IGG+G
Sbjct: 1 MKKLIVATRGSRLALAQTHIVCRLLEEA----GVETEIRTITTAGDRDRIHALVKIGGRG 56
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F EIE++L+SGE D AVHSAKD+P +L GL I+ + D RD + + L
Sbjct: 57 IFVREIERELLSGEADIAVHSAKDLPYQLASGLVIAGTPSQADPRDALV---LLKERKLE 113
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
SV+GT S RR + R ++ D RG + TRL+KL + AI+LA AGI+RL +
Sbjct: 114 AGSVVGTGSPRRIREISRVLPELVFRDIRGNVTTRLHKLERGEYDAIVLAMAGIQRLALD 173
Query: 183 KVIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+I + E P+ QG I +E + + L++ I+ +TW ER +
Sbjct: 174 MEQFQIRPLSTEQVIPAGCQGIIGVECRQKDRELVRLLQQISDPETWRRFQWERQLFTSM 233
Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C + K + +V DGK R G + + + +
Sbjct: 234 KVDCSRPVGIHCRLLKSGRMELLAMV---DGK---RARRLGMEKEGKALCASLKEELYDR 287
>gi|256787075|ref|ZP_05525506.1| porphobilinogen deaminase [Streptomyces lividans TK24]
Length = 303
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 80/301 (26%), Positives = 145/301 (48%), Gaps = 17/301 (5%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A + + ++ V P + ++ ++T GD L +IGG G+F + L+ GE
Sbjct: 1 MAQSGQVADAVSQVTGRP---VELVEITTYGDTSR-EHLAQIGGTGVFVAALRDALLRGE 56
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
+D AVHS KD+PT +GL ++A RED RDV ++ A+ L DL + +GT + RR A
Sbjct: 57 VDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLTDLPRGARVGTGAPRRMA 116
Query: 137 LLLRWRSDISVI----DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
L + + RG ++TR+ + + + A++LA AG+ R+ + + + L+++
Sbjct: 117 QLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLNRVGRIDEVTDFLSVD 176
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+PGQGA+ +E +N + ++ T +V ER+ LA L+ C + + A
Sbjct: 177 TVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERSLLAALEAGCSAPVGALA 236
Query: 253 YCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYIRFISNKN 303
+ G+V +DG ++S G A+ +G + A +
Sbjct: 237 DLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAALALGGELAAEMLAQGAAG 296
Query: 304 V 304
+
Sbjct: 297 L 297
>gi|297516477|ref|ZP_06934863.1| porphobilinogen deaminase [Escherichia coli OP50]
Length = 221
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 108/207 (52%)
Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
RED RD F+S+ +L L S++GTSSLRR+ L R D+ + RG + TRL
Sbjct: 5 TICEREDPRDAFVSNNYDNLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRL 64
Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218
+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+
Sbjct: 65 SKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELL 124
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
+NH +T V ERA L+G C+ I +A ++ +V A DG R
Sbjct: 125 AALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER 184
Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVF 305
G DA +G A+ + + +
Sbjct: 185 RGAPQDAEQMGISLAEELLNNGAREIL 211
>gi|325001831|ref|ZP_08122943.1| porphobilinogen deaminase [Pseudonocardia sp. P1]
Length = 322
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 21/316 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +IGTR S LA+A + L H ++ +ST GDR +T++G
Sbjct: 1 MS--TLKIGTRPSKLAVAQSTTIADRLTAA----GHPSELVTVSTSGDRSM-APVTQLG- 52
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L +G+ID AVHS KD+PT + L+I+A RED RD ++ + L +
Sbjct: 53 VGVFVSALRDALDAGDIDVAVHSFKDLPTAQPEHLRIAAVPGREDPRDALVT-GGRVLGE 111
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A L + V+ RG ++TR+ K+ + + A+++A AG++RL
Sbjct: 112 LGRGARVGTGSPRRAAQLYALGQGLEVVPIRGNVDTRIGKVRSGELDAVVVAAAGLRRLG 171
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL-VKVINHEDTWDSVNCERAFLAE 239
+ + E+++ P+P QGA+ IE + ++ V++ +V ERA LA
Sbjct: 172 RIEEADELIDPLQMLPAPAQGALAIECRETDTGLADVLRSVLDDPGVRAAVAAERAVLAT 231
Query: 240 LDGSCKSAIAGFAYCKG---------STLYFYGI--VLASDGKIFHEVSRNGNRCDAINI 288
L+ C + + A L + V S G A +
Sbjct: 232 LEAGCTAPVGALADVVSDLDDDGRAVDRLSLRAVTGVGDITEGDVLRASVTGEMDAAEKL 291
Query: 289 GRDAAQYIRFISNKNV 304
G A + + +++
Sbjct: 292 GATLAHELLDLGGEDL 307
>gi|88608800|ref|YP_506274.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str.
Miyayama]
gi|88600969|gb|ABD46437.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str.
Miyayama]
Length = 286
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 98/294 (33%), Positives = 153/294 (52%), Gaps = 11/294 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTRCSPLAL A +L ++ + T GD +++ LTE+GGK LF
Sbjct: 4 LKVGTRCSPLALIQARLVERALAPYCA----RTDLVEVKTSGDIVSDVPLTEVGGKALFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L +
Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPNGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT + RR VI RG I TR+ K I+LA+ ++RL ++I
Sbjct: 120 VIGTCAPRRVVQ---LNQRFRVIPLRGNIATRIEK--AKNLDGIILAFCALERLGLRRMI 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+++ P QGA+C+E + +EL+ I+ +T ERAFL E++G CK
Sbjct: 175 SEVIHENVMLPGVAQGALCVEFRKKDRFLRELILNISDRETIICTAAERAFLEEINGDCK 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+A+ A K + LYF G++ + + +G+ +A +GR AA + +
Sbjct: 235 TALGALAIVKNNILYFTGMLAKDNRPRYFRT--SGSCLNAKQVGRRAALALLRM 286
>gi|327539486|gb|EGF26101.1| porphobilinogen deaminase [Rhodopirellula baltica WH47]
Length = 315
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 87/313 (27%), Positives = 140/313 (44%), Gaps = 29/313 (9%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ A L I+PL +KGD R + GLFT+ I++ L+ E
Sbjct: 1 MWQAEHVAKLLKKH----GFQTEIVPLVSKGDTDM-RPIDGTRQVGLFTKRIQQALVDDE 55
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-----------ALHS 125
D AVHS KD+PT+ ++A PRE + D + + +
Sbjct: 56 ADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLEPQTGAESPLDYLPQGA 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+AGI RL+ +
Sbjct: 116 RVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHAGILRLEMTDLP 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
+ +++ P+PGQGA+ IE ++ A + +N + ER L+EL G C
Sbjct: 176 HRLFPLDEMIPAPGQGALGIEVRSDDAGAMHAIANLNDAAARLAATAERKVLSELHGGCL 235
Query: 246 SAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNG---------NRCDAINIGRDA 292
+ IA A + G+ L IV+++DG+ + + +A +G
Sbjct: 236 APIACHAKLETSNHGTELCLRAIVMSADGEQRLQEDARITVQPNDADLHVAEAHELGTLV 295
Query: 293 AQYIRFISNKNVF 305
A+ +R +
Sbjct: 296 AKRLRDKGADKLI 308
>gi|172039905|ref|YP_001799619.1| hypothetical protein cur_0225 [Corynebacterium urealyticum DSM
7109]
gi|171851209|emb|CAQ04185.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 316
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 18/314 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIG 59
+ +GTR S LA A R ++D ++ + + T GD + ++G
Sbjct: 3 NNRRLLVGTRGSTLATTQAGHVRQGMIDA----GYDAELHIVHTPGDASQASQIPVAKVG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G+FTE + L E D AVHS KD+PT + R D R+V IS + L
Sbjct: 59 -VGVFTETLRTALDERECDVAVHSFKDLPTAPDARFRA-VVPKRVDSREVLISVDNKKLM 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + +GTS+ RR + L R D+ ++ RG I TR+ ++ + A++LA AG++R+
Sbjct: 117 ELPEGAKVGTSAPRRVSQLRALRPDLQILPLRGNIGTRMGRV-GDDLDAVILARAGLERV 175
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E ++ E P+P QGA+C+E ++ +A V NH ++ V ER L+
Sbjct: 176 GWLDKAAESIDPELILPAPAQGALCVEVRADDEEAWNSVADQNHTPSYACVVSERTVLST 235
Query: 240 LDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRC-------DAINIGR 290
L+ C + +A A + L G V A DG +R + A +G
Sbjct: 236 LEAGCSAPVAAHATLNEQQNQLTVTGGVFAIDGSRKLLETRTVDIDLAGDWRAAAAGVGA 295
Query: 291 DAAQYIRFISNKNV 304
+ + + +
Sbjct: 296 EIGRILLDAGAAEL 309
>gi|256088596|ref|XP_002580415.1| hydroxymethylbilane synthase; porphobilinogen deaminase
[Schistosoma mansoni]
gi|238665988|emb|CAZ36654.1| hydroxymethylbilane synthase [Schistosoma mansoni]
Length = 411
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+G+R S LAL + L + P ++ ++T GD+I + +L++IG K
Sbjct: 7 RNVVRVGSRRSNLALLQTGMAVNLLQKQN--PHILFEVVEMATVGDKILDVSLSKIGDKS 64
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119
LFT+E+E L+SGE+D VHS KD+P+ L GL + R DV + +
Sbjct: 65 LFTKELENALLSGEVDLVVHSLKDVPSTLPSGLVLGCVFARVSPEDVVLMAPHYRGRKLS 124
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-------------- 165
DL + S +GTS++RR A L R + + RG + TRL KL+
Sbjct: 125 DLPIGSTVGTSAVRRVATLTRKYPHLKFVSIRGNLNTRLAKLDTPPASKDNCCSGNPSPS 184
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
AI+LA AG++R+ I ++ + D + QGA+ E + + +L+ I+ E
Sbjct: 185 YDAIILAKAGVERMGWSHRIDQV--LTDSFYAVSQGALACECRLVDNFIMDLLSHIHDES 242
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFA--YCKGS----TLYFYGIVLASDGKIFHEVSRN 279
+ ER+ + +LDG C I + KG L + +L+ DG E S +
Sbjct: 243 AALTTIAERSLMRQLDGGCSIPIGVRSDLVLKGDLNYYQLTLHANILSVDGGKSIERSAS 302
>gi|150401746|ref|YP_001325512.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3]
gi|150014449|gb|ABR56900.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3]
Length = 342
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 14/304 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
IGTR S LAL ++ L ++++ +I + + T GD+ + L+E+G G+F
Sbjct: 43 KIIIGTRGSKLALTQTNYIKALLENLNE--NIDIEVKIVKTTGDKDQSSKLSELG-LGVF 99
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-----K 119
T+E++ K+++ EID AVHS KD+PT + L I++ RE D+ + + +
Sbjct: 100 TKELDLKMLNNEIDIAVHSLKDVPTVWNENLTIASTPKRESYADLILWNKEDNDINIEKC 159
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+ + ++GTSS+RR+ L ++ RG ++TRLNKL N + AI+LA AG+ RL
Sbjct: 160 NEKDNIIVGTSSIRRQEFLKIKYPNLKTKLLRGNVDTRLNKLRNKEYDAIILAEAGLNRL 219
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
K + + P+P QG + + + +N + +++ INH+ T+ ER L E
Sbjct: 220 KMDLSDFNYERLNIL-PAPAQGVVGVASRTDNKEVISILQKINHKKTFLEALAERYALRE 278
Query: 240 LDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQ 294
G C++ + L V+ + E + N + D A N+G +
Sbjct: 279 YGGGCQAPFGALSKYDEENKILNLKCSVVIGNTIKSKEENINCDIMDIEGAKNLGIKIGK 338
Query: 295 YIRF 298
YI+
Sbjct: 339 YIKQ 342
>gi|144479|gb|AAA23113.1| porphobilinogen deaminase [Prosthecochloris vibrioformis]
Length = 279
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 90/276 (32%), Positives = 138/276 (50%), Gaps = 12/276 (4%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
NI + + T GD + + L++IG GLFT++IEK L++GEID AVHS KD+PT ++
Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEIDLAVHSLKDVPT-----VR 56
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHS----VIGTSSLRRKALLLRWRSDISVIDFRG 152
A+L ++ + TSSLRR + LL R D+ ++D RG
Sbjct: 57 RKAWLSPRSPSVKTPRRHHFQVRQGVDGPSAEAKMATSSLRRMSQLLSLRPDLEIMDIRG 116
Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212
+ TR K + A++LAYAG+ RL+ I EIL E P+ GQGA+ IET ++
Sbjct: 117 NLNTRFKKFDEGDFDAMMLAYAGVYRLEFSDRITEILPHETMLPAVGQGALGIETRTDDA 176
Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272
+ +E+V+V+N ++T ERA L L G C+ I F TL V + DGK
Sbjct: 177 ETREIVRVLNDDNTEMCCRAERALLRHLQGGCQIPIGSFGSYIDGTLKLLAFVGSVDGKT 236
Query: 273 FHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVF 305
+A +G + A+ + + + +
Sbjct: 237 GLRNEVTKAVKTPEEAEAVGIELAEILLSMGAEKIL 272
>gi|289581680|ref|YP_003480146.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099]
gi|289531233|gb|ADD05584.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099]
Length = 378
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 88/362 (24%), Positives = 149/362 (41%), Gaps = 61/362 (16%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + R+ TR S LA A + +L + + + ++ + T GD+I + + +G
Sbjct: 1 MRTRGTLRLATRGSTLARRQATLVKEALENRR----YEVELVTVETTGDQIRDELIHRLG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G F E++++++ G++D A+HS KDMPT+ L +A R D I+ +L+
Sbjct: 57 KTGAFVRELDERVLEGDLDGAIHSMKDMPTEQPDDLVTAAVPERGRPGDYLITPEGATLE 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------------ 161
+L + +GTSSLRR+A LL R D++V RG ++TRL KL
Sbjct: 117 ELPQGATVGTSSLRRRAQLLSERPDLTVEPLRGNVDTRLEKLLAPSLQAEHEERSEADKE 176
Query: 162 ----------NNNKAHAILLAY--------------------------AGIKRLKKEKVI 185
+ + AG+ R + +
Sbjct: 177 RKGNTGEEDFEPEFDQTVDEWFDGLSELEKQALGREVETEYDAIVLAQAGLVRSGLDHYV 236
Query: 186 K-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ L F P+PGQGA+ + T + A E+ I+H + ER LAEL G C
Sbjct: 237 DAQELPTGTFVPAPGQGALAV-TATDGETATEIQSAIDHPRSRVETTVERTVLAELGGGC 295
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ I +A +G ++ V DG+ +R+ + R+ AQ + +
Sbjct: 296 IAPIGIYAIVQGEYVHATVSVFNRDGEESVAATRDLPVENHATAAREFAQDLADRGAAEL 355
Query: 305 FN 306
Sbjct: 356 IE 357
>gi|326802537|ref|YP_004320356.1| porphobilinogen deaminase [Sphingobacterium sp. 21]
gi|326553301|gb|ADZ81686.1| Porphobilinogen deaminase [Sphingobacterium sp. 21]
Length = 546
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 90/303 (29%), Positives = 151/303 (49%), Gaps = 16/303 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ IGTR S LAL A + L + + + T+GD I + L ++ GK
Sbjct: 1 MDRTLIIGTRGSDLALWQANHVKDRLATI----GVQAELKVIKTQGDNIQHLRLDKLEGK 56
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117
G FT+E+E++L++ +ID AVHS KD+PT GL+I+A RED ++ I +
Sbjct: 57 GFFTKELEEELLAEKIDIAVHSHKDLPTANPPGLRIAAVSEREDPSELLIILKDCVDLKK 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+ ++++GTSS RRKA LL +R D+ + D RG + TRL KL + K AI+LA AG++
Sbjct: 117 RLSVKHNAIVGTSSNRRKAQLLAFRPDLEIEDLRGNVNTRLQKLRDEKYDAIMLAKAGVE 176
Query: 178 RLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
RLK + + EI+ + P+P QG + I+ ++ E+++ ++ +D +++ ER
Sbjct: 177 RLKLDLSEFHVEIIPPTEIIPAPAQGVLAIQIRESDHTLYEVLQKLHQKDVAETIGVERK 236
Query: 236 FLAELDGSCKSAIAGFAY--CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293
L +G C + + G ++ A DG A + +
Sbjct: 237 VLNLFEGGCHMPLGCYCRKTTTGYEVW-TAK--AKDG-ESFPTRLYLKAESAAGLAEEIV 292
Query: 294 QYI 296
+
Sbjct: 293 EKF 295
>gi|289705146|ref|ZP_06501550.1| hydroxymethylbilane synthase [Micrococcus luteus SK58]
gi|289558174|gb|EFD51461.1| hydroxymethylbilane synthase [Micrococcus luteus SK58]
Length = 377
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 90/361 (24%), Positives = 146/361 (40%), Gaps = 65/361 (18%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RIGTR S LA +L + ++ + T+GD +T +L +GG
Sbjct: 1 MT--PLRIGTRGSALATTQTTHVAEALTERS---GLAHELVVIRTEGD-VTTGSLASLGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + ++ G +D AVHS KD+P + L+I+A R D+RD + +L
Sbjct: 55 TGVFASALRAAVLDGAVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTLAT 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------NNN 164
L + +GT S RR A L R D+ ++D RG ++TRL ++
Sbjct: 115 LPEGARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAAGSPRG 174
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP------------ 212
A++LA AG+ RL + VI E ++ E P+PGQGA+ +E +
Sbjct: 175 DLDAVILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAVEIRAEDESFLGRALLDPQA 234
Query: 213 ---KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGI 264
+ +++++ DT +V ERA L L+ C + I A + +
Sbjct: 235 PVGRLHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVARVSDGEAGAPRIEMTAM 294
Query: 265 VLASDGKIFHEVSRN-----------GNRC------------DAINIGRDAAQYIRFISN 301
V A DG + + G+ A +G A+
Sbjct: 295 VAALDGSRVLRRTSSVQLDPVPADVAGDPAAADEWLEDTLFVAAEALGVHVAEQFVAEGA 354
Query: 302 K 302
Sbjct: 355 D 355
>gi|239918007|ref|YP_002957565.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
gi|259646260|sp|C5CB88|HEM3_MICLC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|239839214|gb|ACS31011.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
Length = 377
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 90/361 (24%), Positives = 144/361 (39%), Gaps = 65/361 (18%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RIGTR S LA +L ++ + T+GD +T +L +GG
Sbjct: 1 MS--PLRIGTRGSALATTQTSHVAEALTARS---GLAHELVVIRTEGD-VTTGSLASLGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + ++ G +D AVHS KD+P + L+I+A R D+RD + +L
Sbjct: 55 TGVFASALRAAVLDGVVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTLAT 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------NNN 164
L + +GT S RR A L R D+ ++D RG ++TRL ++
Sbjct: 115 LPEGARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAVGSPRG 174
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP------------ 212
A++LA AG+ RL + VI E ++ E P+PGQGA+ +E +
Sbjct: 175 DLDAVILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAMEIRAEDESFLGRALLDPEA 234
Query: 213 ---KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGI 264
+ +++++ DT +V ERA L L+ C + I A + +
Sbjct: 235 PVGRLHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVARVGDGEAGAPRIEMTAM 294
Query: 265 VLASDGKIFHEVS-----------RNGNRC------------DAINIGRDAAQYIRFISN 301
V A DG + G+ A +G A+
Sbjct: 295 VAALDGSRVLRRTSSVQLDPVPADVVGDPAAADEWLEDTLFVAAEALGVHVAEQFVAEGA 354
Query: 302 K 302
Sbjct: 355 D 355
>gi|311896763|dbj|BAJ29171.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 318
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 147/291 (50%), Gaps = 17/291 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P R+GTR S LA+A + + V I + ++ ++T GD ++ +L IGG
Sbjct: 1 MT--PLRLGTRRSALAMAQSGMVAEA---VAGITGRRVELVEITTYGD-VSRESLARIGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ G ID AVHS KD+PT GL ++A RED RD ++ +L +
Sbjct: 55 TGVFVSALRDALLEGRIDLAVHSLKDLPTAAPAGLLLAAVPEREDARDALVARDGLTLAE 114
Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILL 171
+GT S RR A L W + RG ++TR+ + + + A++L
Sbjct: 115 LVGKSTGRAVRVGTGSPRRMAQLNAWARARGAELETVAIRGNVDTRIGFVASGELDAVVL 174
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ RL + I E L+ E P+PGQGA+ +E +P ++ ++H T +V
Sbjct: 175 ATAGLNRLGRAAEITEHLDTELMLPAPGQGALAVECV--DPTLAAVLARLDHRPTRAAVV 232
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
ERA LA L+ C + +A A G+ L G+V ++DG ++S NG
Sbjct: 233 AERALLATLEAGCSAPVAALATWAGTELRLDGVVGSTDGTELIKMSANGPL 283
>gi|171185430|ref|YP_001794349.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta]
gi|229846306|sp|B1YDP0|HEM3_THENV RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|170934642|gb|ACB39903.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta]
Length = 296
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 9/301 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F
Sbjct: 2 KIRVATRGSKLSLIQTEELLAQIKAVE--PDIRFEIVVVKTTGDLIQDKPLFQIGVKGVF 59
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++ GE D AVHS KD+P+ L GL ++ Y R D +S +L+ L
Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSDLTPGLALAGYSRRAPPNDALVSPRGYTLETLPRG 119
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK--RLKKE 182
+V+GTSS+RR L R D+ + RG ++TR+ K+ + + A ++A AG++
Sbjct: 120 AVVGTSSVRRAEFLKAARPDLEIKPLRGNVDTRVAKILSGQYDAAVMAAAGLQRLYGGAP 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
+ L +ED PP PGQG + + +L++ + ERAFLAE+
Sbjct: 180 PIPAVPLAVEDLPPPPGQGIVAAVAREEDTWLTDLLRRASDRKAAAEAAAERAFLAEVGA 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C A+ G A + + F G H V G D +GR AA + + K
Sbjct: 240 GCHVAVGGIARQTPAGIEFTAGYAQ--GGRKHLVKVYG--EDPTEVGRRAA-RLVAQAMK 294
Query: 303 N 303
Sbjct: 295 K 295
>gi|171914695|ref|ZP_02930165.1| Hydroxymethylbilane synthase [Verrucomicrobium spinosum DSM 4136]
Length = 318
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 149/308 (48%), Gaps = 20/308 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----- 59
R+GTR S LAL A ++L H P + ++T GD+ + +E
Sbjct: 8 TLRLGTRGSELALRQAEMVEAALHAAH--PYLRVERKVIATTGDKRPDLRFSEFTEGDRL 65
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
KG+FT+E+E L SGEID AVHS KD+PT L + I+ LPR I DV IS +L
Sbjct: 66 DKGIFTKELEIALASGEIDIAVHSLKDVPTVLDEKFFIAGVLPRAPIEDVLISREGYTLA 125
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178
L + +GTSS+RR L + ++ RG + TR+ KL + AILLA AG++R
Sbjct: 126 TLPAGAKVGTSSVRRIRQLQWLNPGVECVEIRGNVPTRIRKLFAPSDLDAILLARAGLER 185
Query: 179 ----------LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
+ + + IL+ E+F P+ GQGAI IE V++ E +K INHE+T+
Sbjct: 186 LSLLDGEHVVVDGQPLHAVILDCEEFLPAAGQGAIGIEARVDDAHTLEFLKAINHEETYA 245
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD--GKIFHEVSRNGNRCDAI 286
V ER FL L C++ I + + L V G+ EV+
Sbjct: 246 RVTAEREFLHILKAGCQTPIGAHTFLENGVLQMKVRVFDETDPGRPPKEVTSTEPYHSPK 305
Query: 287 NIGRDAAQ 294
+ + A
Sbjct: 306 GLAAEVAA 313
>gi|232245|sp|P30527|HEM3_YERIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|48614|emb|CAA47276.1| hydroxymethylbilane synthase [Yersinia intermedia]
Length = 183
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 76/184 (41%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + +D RD F+S + D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDPRDAFVSPHFAHIDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S++G SSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL
Sbjct: 119 LPAGSIVGNSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178
Query: 181 KEKV 184
Sbjct: 179 LASR 182
>gi|254796754|ref|YP_003081590.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois]
gi|254589999|gb|ACT69361.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois]
Length = 286
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 11/294 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++G RCS LALA A +L + I ++ + T GD +++ LTE+GGK LF
Sbjct: 4 LKVGARCSTLALAQARLVERALAPYCE----RIDLVGVRTSGDILSDIPLTEVGGKALFL 59
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L +
Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPSGA 119
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGT + RR VI RG I TR+ K I+LA+ G++RL K+I
Sbjct: 120 VIGTCAPRRVVQ---LNQRFRVIPLRGNIATRVEK--AKNLDGIILAFCGLERLGLCKMI 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E+++ + P QGA+C+E + +EL+ I+ +T ERAFL E++G CK
Sbjct: 175 SEVIHEDVMLPGVAQGALCVEFRKKDHFLRELILNISDRETIICTTAERAFLEEINGDCK 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+A+ A K +TLYF G++ + + +G+ +A IGR AA + +
Sbjct: 235 TALGALAVVKNNTLYFTGMLGKDNRPCYFRT--SGSCLNAKQIGRSAALALLRM 286
>gi|18312026|ref|NP_558693.1| porphobilinogen deaminase [Pyrobaculum aerophilum str. IM2]
gi|25453025|sp|Q8ZYW7|HEM3_PYRAE RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|18159451|gb|AAL62875.1| porphobilinogen deaminase (hemC) [Pyrobaculum aerophilum str. IM2]
Length = 297
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 90/298 (30%), Positives = 145/298 (48%), Gaps = 8/298 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++ TR S L+L E + + V P + I + T GD + ++ L +IG KG+F
Sbjct: 3 LKVATRGSRLSLLQTEEFLAQIKAVE--PRVDFEIKIVKTTGDLVQDKPLFQIGVKGIFE 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ ++ GE D A+HS KD+P+++ GL ++ + R D +S L+ L +
Sbjct: 61 KEVNLAVLKGEADIAIHSLKDLPSEISPGLVLAGFSKRTLPYDAVVSAVGYDLESLPKGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE--K 183
++GTSS+RR + R D+ + RG ++TR+ K+ K A ++A AGI RL E
Sbjct: 121 LVGTSSVRRAEFIKSLRPDVRIEPLRGNVDTRVQKILQGKYDAAVMAAAGILRLYGESPP 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V +L E PP PGQG + +L+K + ER FL +
Sbjct: 181 VKLSLLRPELLPPPPGQGIVAAVVREGEGWLIDLLKKASDPRATVEALAEREFLKNVGAG 240
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
C A+ G A+ + + F AS GK F V G D + +GR AA+ I+ ++
Sbjct: 241 CHVAVGGTAFSRNGYIEFIAGYAAS-GKRFV-VKLFG--EDPVEVGRRAAEEIKRVAA 294
>gi|726352|gb|AAC44323.1| porphobilinogen deaminase [Yersinia pestis]
Length = 184
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 105/180 (58%), Gaps = 2/180 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG
Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D
Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL
Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178
>gi|323305779|gb|EGA59518.1| Hem3p [Saccharomyces cerevisiae FostersB]
Length = 275
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 82/274 (29%), Positives = 128/274 (46%), Gaps = 13/274 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + + P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEEKY--PDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115
K L+T+E+E L ++D VHS KDMPT L +G ++ R D D +
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171
+SL DL ++GTSS+RR A L R + RG I+TRL KL++ + I+L
Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
A AG+ R+ E I + + + + GQGA+ IE + K +++ I +
Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYG 263
ERA + L+G C I + T + G
Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKITIKG 272
>gi|332668763|ref|YP_004451770.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484]
gi|332337800|gb|AEE44383.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484]
Length = 326
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 94/309 (30%), Positives = 140/309 (45%), Gaps = 25/309 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RIGTR S LAL +L I + + T GDR +L +GG
Sbjct: 1 MPQQ-VRIGTRASTLALTQTGHVADALAAHG---GLAIETVRVRTDGDR-LTGSLASLGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ G D AVHS KD+PT GL ++A PRED RD + +L D
Sbjct: 56 AGVFVTALRDALLDGRCDVAVHSLKDLPTADAPGLVLAAVPPREDPRDALCARDGLTLAD 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-----NNKAHAILLAYAG 175
L + +GT S RR A LL R D+ V+D RG ++TRL ++ A++LA AG
Sbjct: 116 LPRGARVGTGSPRRAAQLLAARPDLDVVDIRGNVDTRLGRVAGSPTGPGDLDAVVLARAG 175
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA------QELVKVINHEDTWDS 229
+ R+ + + + E+ + P+PGQGA+ +ET + ++ T +
Sbjct: 176 LARIGRLEAVTELFGPDVMLPAPGQGALAVETRAAGLTTDLAGPLHAALAALDDRPTRLA 235
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRN----GNRCD 284
V ERA LA L+ C + + A TL +V+ +DG G
Sbjct: 236 VLAERALLARLEAGCAAPVGTLATLDADGTLTLDAVVVRTDGTASLRRRARTALPGTAAQ 295
Query: 285 ----AINIG 289
A +G
Sbjct: 296 DVVAARALG 304
>gi|255326986|ref|ZP_05368062.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296]
gi|255296203|gb|EET75544.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296]
Length = 377
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 88/372 (23%), Positives = 150/372 (40%), Gaps = 69/372 (18%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------KIPPHNIVIIPLSTKGDRI 50
M + +GTR S LAL + ++ ++ + + + T+GD +
Sbjct: 1 MSHHEYTLGTRGSALALTQSRIAAETVTSLYTEHQAHHGAENPEAVSFELRTVKTEGD-V 59
Query: 51 TNRTLTEIGGKGLFTEEI-------EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPR 103
L +GG G+F + E +D AVHS KD+P+ GL ++A L R
Sbjct: 60 LTGPLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVVAATLKR 119
Query: 104 EDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-- 161
ED RD ++ ++ L S +GT S RR A L R D+ ++D RG + TR+ ++
Sbjct: 120 EDPRDALVARDGLTVDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDVRGNVGTRIGRVKG 179
Query: 162 ----------------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
+ A++LA +G+KRL KE++I E L+
Sbjct: 180 LEEHAGKQVVLRQNAETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDPTR 239
Query: 194 FPPSPGQGAICIETHVNNPKAQELVK------------------VINHEDTWDSVNCERA 235
P+PGQGA+ +E + + + NH +T +V+ ERA
Sbjct: 240 MLPAPGQGALALEVRESEFENPDSAVLADPEVARPVRALGRALLAANHHETRLAVSAERA 299
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292
L L+ C + I +A+ L +V + DG + + A +G
Sbjct: 300 LLRRLEAGCAAPIGAYAHVVEGDLVLNVVVASPDGTDMLRHTSATAELDVPGAERLGVRV 359
Query: 293 AQYIRFISNKNV 304
A+ + + +
Sbjct: 360 AEDLLQMGAAAL 371
>gi|103488353|ref|YP_617914.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256]
gi|123379466|sp|Q1GP41|HEM3_SPHAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|98978430|gb|ABF54581.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256]
Length = 315
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 105/306 (34%), Positives = 152/306 (49%), Gaps = 8/306 (2%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
P RIGTR SPLA+A A ++L+ H + + I+P++ GDRI +R L E+GGK
Sbjct: 8 DNPLRIGTRASPLAMAQAHMAAAALIAAHGLAMAALEIVPMTATGDRIQDRALAEVGGKA 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119
L+T E++ L +G ID AVHS KD+ T + A L R D RD + AQ +
Sbjct: 68 LWTRELDAALDAGTIDVAVHSLKDVETLRDARFFLGAMLERADPRDRLVVREGIAAQKIS 127
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L + +GTSS RR A + R R D+ + RG + TRL KL +A A LLA AG++RL
Sbjct: 128 ELPHGARLGTSSPRRAAQVRRLRPDLDTVLLRGNVATRLAKLAAGEADATLLAAAGLERL 187
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I + E P+ QGAI IE ++ L+ I+H T +V ERA LA
Sbjct: 188 GM-HDIGAVQGTELLLPAASQGAIGIECRADDAATIALLAAIDHAPTHRAVAAERALLAV 246
Query: 240 LDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
L G C+S +A +A + L + + DG DA + +
Sbjct: 247 LGGDCRSPVAAYAEWQADGVLRLDAEIFSEDGADHVAGHVI--VTDAGVVA-ALGHRLLA 303
Query: 299 ISNKNV 304
+ ++
Sbjct: 304 EAPPSI 309
>gi|320106346|ref|YP_004181936.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4]
gi|319924867|gb|ADV81942.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4]
Length = 350
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 96/352 (27%), Positives = 145/352 (41%), Gaps = 60/352 (17%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-------LTEI 58
R+G+R S LAL A +SL I+ GDR+ + E+
Sbjct: 3 LRLGSRGSQLALWQANHIAASLRGAGHTTKITIIRTT----GDRMQDPAYVKENPVTPEM 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
KG+F +EIE+ L+ GEID AVHS KD+PT + ++A R D RD +S L
Sbjct: 59 DAKGIFIKEIEEALLRGEIDLAVHSLKDLPTVMDPRFTLAAIPTRADARDALLSPEWVQL 118
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + +GT+S RRKA +L R D+ ++ RG I+TRL KL + A++LA AGI R
Sbjct: 119 HTLPDGARVGTTSPRRKAQMLAHRPDLQFVEIRGNIDTRLRKLAAGQCDALVLACAGIDR 178
Query: 179 LKKEKVIKEILNI--------------------------------------------EDF 194
L + L+ +
Sbjct: 179 LGARLLHPVDLDPAHPEHGRAPHVECVTHADHDHLEEHPTEHEPAGQVDWIRERFAADTM 238
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
P+PGQGA+ +ET + P+ V ++ +T +V ER L L G C + +
Sbjct: 239 CPAPGQGALGVETLSDAPEVIAAVSALDDAETRYAVEAERWMLHALGGGCSLPVGAWCVD 298
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCD-AINIGRDAAQYIRFISNKNVF 305
K V A+DG + N + A ++G A + + +
Sbjct: 299 K----RLTANVTAADGDEMLSSEISANEGESARSLGERVAADLVARGARELL 346
>gi|118431819|ref|NP_148522.2| hydroxymethylbilane synthase [Aeropyrum pernix K1]
gi|152031618|sp|Q9Y9J0|HEM3_AERPE RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|116063141|dbj|BAA81310.2| hydroxymethylbilane synthase [Aeropyrum pernix K1]
Length = 307
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 87/294 (29%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ R S L+L + L + + ++ + + GD ++R L IG G+FT
Sbjct: 3 VRVAARGSRLSLLQVEQALEELSRYAGV-SMHWEVVRVKSAGDVWSDRPLESIGVVGVFT 61
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK-LLKGLQISAYLPREDIRDVFISHT-AQSLKDLAL 123
E+++ + SG D AVHS KDMPT L+I R RD IS ++DL
Sbjct: 62 REVDRAVASGAADIAVHSLKDMPTSGYGGPLKIVYIASRPSARDALISRQGPGRVEDLEP 121
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S +GTSS RR+AL L + I V + RG ++TRL KL AI+ + AG+ RL +
Sbjct: 122 GSTLGTSSARRRALSLHYNPRIRVENLRGNLDTRLRKLREGLYDAIIASEAGLIRLGVD- 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V L+ FPP+PGQG + + +++++ ++ W ER L
Sbjct: 181 VEYTPLDPSYFPPAPGQGFVAV-VARVGSNVEKMLRDLDKPPWWHVAWAERGVLEGARAG 239
Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
C++ +A +A G S + L+ DG + G +A IG + +
Sbjct: 240 CRTPVAAYAEPLGRSMVRVTAAALSPDGSRAYWARAEGRIEEARRIGVSLGEEL 293
>gi|205374358|ref|ZP_03227156.1| porphobilinogen deaminase [Bacillus coahuilensis m4-4]
Length = 252
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 3/246 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ +G+R S LAL L + + + TKGD I + TL+++GGKG
Sbjct: 1 MRKIVVGSRRSTLALTQTNWVIEQLKQLGG--NFTFEVKEIVTKGDVILDVTLSKVGGKG 58
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LF +EIE+ ++ EID AVHS KDMP++L GL + PRED RD IS LKDL
Sbjct: 59 LFVKEIEQAMMDKEIDMAVHSMKDMPSELPSGLTLGCVPPREDRRDALISKNHVKLKDLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+VIGTSSLRR A LL R D+ + RG I+TRL KL+ + AI+LA AG+ R+
Sbjct: 119 KGAVIGTSSLRRGAQLLAVRPDLDIKWIRGNIDTRLAKLDGEEYDAIILAAAGLARMGWA 178
Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
V+ E L+ + P+ GQGA+ IE ++ + +L+ N ++T + ER FL +++
Sbjct: 179 KDVVTEFLSEDICVPAIGQGALGIECREDDEELLDLLSKFNDKETERTTKAERTFLHKME 238
Query: 242 GSCKSA 247
G S
Sbjct: 239 GGVPSP 244
>gi|126640355|ref|YP_001083339.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978]
Length = 226
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 73/222 (32%), Positives = 121/222 (54%)
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KD+P L +GL ++ RED D F+S+ + DL + +GTSSLRRK+ +L+ R
Sbjct: 1 MKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVGTSSLRRKSQILKQRP 60
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
D+ +ID RG + TRL KL++ + AI+LA AG+KRL + I+ + P+ GQGA+
Sbjct: 61 DLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAERIRHCIEPSVSLPAVGQGAL 120
Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263
+E ++ + L++ + H +T V ERAF A L+G C+ IAG+A + ++ G
Sbjct: 121 GLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGGCQVPIAGYATLQDGKIHIEG 180
Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
V + DG+ +A +G + A+ + ++
Sbjct: 181 RVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGDLL 222
>gi|119480587|ref|XP_001260322.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181]
gi|119408476|gb|EAW18425.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181]
Length = 363
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 94/334 (28%), Positives = 136/334 (40%), Gaps = 39/334 (11%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--------G 60
G R S LAL S L P I S GD + G
Sbjct: 26 GCRKSELALVQTRWVTSKLGQ-TLDPSPTFQIATGSAVGDADKQAPFAVLSKLTGGSDIG 84
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K L+T E+E L++G++ C VHS KDMPT L + A RED D +
Sbjct: 85 KSLWTNELELDLVAGKVHCLVHSLKDMPTTLPPHCLLGAVPEREDCSDAVCMRSDLKFTS 144
Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175
+ S++GTSS RRKAL+ R + V++ RG ++TRL KL+ +++ ILLA AG
Sbjct: 145 IDQLPPGSIVGTSSSRRKALVRRNWPHLEVVECRGNVDTRLAKLDAPSSRFSCILLATAG 204
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL I L+ FP + GQGA+ +E + P ELV+ ++H+ + ERA
Sbjct: 205 LLRLGLGHRITHRLDDSIFPYAVGQGALGLEVSTDRPDILELVRHVDHKPSRWRGIAERA 264
Query: 236 FLAELDGSCKSAIAGFAYCK----------------------GSTLYFYGIVLASDGKIF 273
L L G C S I + + G L +VL +G
Sbjct: 265 MLRSLQGGCSSPIGVQSSLEPLGKEENGSTEDDSQRGRDSSSGGNLSLRAMVLHIEGTSE 324
Query: 274 HEVSRNGNR---CDAINIGRDAAQYIRFISNKNV 304
+A +G A + + +
Sbjct: 325 IVAEDMATVRCDEEAELLGVSVANMLLAKGARGL 358
>gi|312878897|ref|ZP_07738697.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260]
gi|310782188|gb|EFQ22586.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260]
Length = 301
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 94/290 (32%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+ TR SPLA +L + + +ST GDR L GG G F
Sbjct: 1 MILLTRGSPLARIQTRGWMDALESL----GAETTLQAVSTHGDRDRTTPLPCFGGFGAFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ +E+KL++GE D AVHS KD+P +GL ++ LPR + D+ ++ SL+ L +
Sbjct: 57 KALEEKLLAGEGDGAVHSLKDVPVAQPEGLVLAGVLPRGPVGDLLVTREGLSLETLPPGA 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+G+SSLRR A LR R D+ + RG ++TRL KL + A++LA AG++RL +
Sbjct: 117 RVGSSSLRRTAQGLRVRKDLRFLCCRGNVQTRLRKLEAGELDALILAEAGVRRLGLDLPG 176
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L F +PGQGA+ +E + L + NH TW V ER L C
Sbjct: 177 AVRLP---FLSTPGQGAVALEAR-AGSVLESLARQTNHLPTWLEVCGERQVLGAFGKGCS 232
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292
+ +A +G L VLA DG S G +A +G+
Sbjct: 233 APVAVQGRYEGGVLTLEAEVLALDGSQSVGASLGGPAGTEEEARALGQTL 282
>gi|283457696|ref|YP_003362282.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18]
gi|283133697|dbj|BAI64462.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18]
Length = 454
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 90/372 (24%), Positives = 150/372 (40%), Gaps = 69/372 (18%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP----------HNIVIIPLSTKGDRI 50
M + +GTR S LAL + ++ ++ + + + T+GD +
Sbjct: 78 MSHHEYILGTRGSALALTQSRIAAETVTSLYTEHQAHHGAADAEVVDFTLRTVKTEGD-V 136
Query: 51 TNRTLTEIGGKGLFTEEI-------EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPR 103
L +GG G+F + E +D AVHS KD+P+ GL I+A L R
Sbjct: 137 LTGPLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVIAATLKR 196
Query: 104 EDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-- 161
ED RD ++ +L L S +GT S RR A L R D+ ++D RG + TR+ ++
Sbjct: 197 EDPRDALVARDGLTLDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDIRGNVGTRIGRVKG 256
Query: 162 ----------------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193
+ A++LA +G+KRL KE++I E L+
Sbjct: 257 LEEHAGKQVVLRQNTETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDPTR 316
Query: 194 FPPSPGQGAICIETHVNNPKAQELVK------------------VINHEDTWDSVNCERA 235
P+PGQGA+ +E + + + NH +T +V+ ERA
Sbjct: 317 MLPAPGQGALALEVRESEFENPDPAVLADPEVARPVRALGRALLAANHHETRLAVSAERA 376
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292
L L+ C + I +A+ L +V + DG + + A +G
Sbjct: 377 LLRRLEAGCAAPIGAYAHVVEGDLVLSVVVASPDGTDMLRHTSATAELDVPGAERLGVRV 436
Query: 293 AQYIRFISNKNV 304
A+ + + +
Sbjct: 437 AEDLLQMGAAAL 448
>gi|294815172|ref|ZP_06773815.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|294327771|gb|EFG09414.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
Length = 333
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 13/306 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIG---GKGL 63
+G+R S LA A R L + + P + GDR TL+ + G
Sbjct: 10 VGSRASNLAKAQ---VREYLRPLRERFPEITFTHRVILEGGDRDRTSTLSAVSAVNGGSA 66
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F+ E L G++D VHS KD+PT GL + RED+RD +L L
Sbjct: 67 FSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDAL---CGSTLAGLRK 123
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++RL +
Sbjct: 124 GARVGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRRLGLDD 183
Query: 184 VIKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I ++L ++ FPPSPGQGA+ I+ T ++ ++L+ + +V ERA LAEL
Sbjct: 184 AIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERALLAELH 243
Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C + +A L G V + DG+ + G + +G A +
Sbjct: 244 GGCSVPVGAYAEPLPNGELSLAGQVTSLDGRERVAGTLTGPATEPEKLGASLAALLIDRG 303
Query: 301 NKNVFN 306
+ +
Sbjct: 304 AHAILD 309
>gi|254387445|ref|ZP_05002684.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|326443531|ref|ZP_08218265.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
gi|197701171|gb|EDY46983.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064]
Length = 329
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 13/306 (4%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIG---GKGL 63
+G+R S LA A R L + + P + GDR TL+ + G
Sbjct: 6 VGSRASNLAKAQ---VREYLRPLRERFPEITFTHRVILEGGDRDRTSTLSAVSAVNGGSA 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
F+ E L G++D VHS KD+PT GL + RED+RD +L L
Sbjct: 63 FSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDAL---CGSTLAGLRK 119
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+ +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++RL +
Sbjct: 120 GARVGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRRLGLDD 179
Query: 184 VIKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
I ++L ++ FPPSPGQGA+ I+ T ++ ++L+ + +V ERA LAEL
Sbjct: 180 AIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERALLAELH 239
Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300
G C + +A L G V + DG+ + G + +G A +
Sbjct: 240 GGCSVPVGAYAEPLPNGELSLAGQVTSLDGRERVAGTLTGPATEPEKLGASLAALLIDRG 299
Query: 301 NKNVFN 306
+ +
Sbjct: 300 AHAILD 305
>gi|83282130|ref|XP_729634.1| porphobilinogen deaminase [Plasmodium yoelii yoelii str. 17XNL]
gi|23488022|gb|EAA21199.1| porphobilinogen deaminase, putative [Plasmodium yoelii yoelii]
Length = 583
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 170/340 (50%), Gaps = 41/340 (12%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60
K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ GG
Sbjct: 70 TKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFGG 129
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S ++L+D
Sbjct: 130 KGIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKNLRD 189
Query: 121 LALHSV-----------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169
+ L S I TSSLRR + + ++ + RG I TR+ KL NN +I
Sbjct: 190 INLSSHVIDKEIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINTRIAKLFNNSFDSI 249
Query: 170 LLAYAGIKR----------------------------LKKEKVIKEILNIEDFPPSPGQG 201
++A+ G++R + + + LN P+ QG
Sbjct: 250 IIAFCGLERLVSKKILRQIMKNNIKDKSYIINYKNISIDLRHLNIQKLNTNIMCPALCQG 309
Query: 202 AICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF 261
I + ++ NNP+ +++K IN+E + N ERAFL ++DGSC I G+ + ++F
Sbjct: 310 IIGVTSNKNNPEISQILKNINNEKSQIMANIERAFLQKIDGSCTMPIGGYTKFSKNKIFF 369
Query: 262 YGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
I+ +G +++ + D I +AA+ I+
Sbjct: 370 NAIINDINGLENYKIKVVRHLNDLDGIADEAAEKIKEKIG 409
>gi|226478112|emb|CAX72749.1| hydroxymethylbilane synthase [Schistosoma japonicum]
Length = 413
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 27/301 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+G+R S LAL S L P ++ ++T GD I + L++IG K
Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV +
Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164
DL + + +GTSS+RR A L+R + I RG + TRL KL+
Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
A++LA AG++R+ I ++ + D + QGA+ E NN +L+ +I+ E
Sbjct: 184 SYDALILAKAGVERMGWVDRIDQV--LSDSFYAVSQGALACECLQNNTFIMDLLSLIHDE 241
Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSR 278
+ + ER+ + +LDG C I+ + K S L + +L+ DG E S
Sbjct: 242 SSALTAIAERSLMHQLDGGCSIPISVRSDLTLKEDFKSSKLTLHANILSVDGVKSVERSA 301
Query: 279 N 279
+
Sbjct: 302 S 302
>gi|284047314|ref|YP_003397654.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684]
gi|283951535|gb|ADB54279.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684]
Length = 314
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 142/295 (48%), Gaps = 17/295 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RIGTR S LAL A S L D + +IP++T GDR +G
Sbjct: 1 MS--VLRIGTRASALALVQAEHVASLLRD----GGAQVEVIPITTSGDRGR-----LLGD 49
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
K + +E+E L++ E+D AVHSAKD+P +L G ++ R D RD A SL+
Sbjct: 50 KSRWVKELEAALLADEVDVAVHSAKDVPAELPDGFVLAGVPARADARDALC--GAASLEQ 107
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L +V+GTSSLRR A L R D+ V+ RG ++TRL KL + +A AI+LA AG++RL
Sbjct: 108 LPDGAVVGTSSLRRAAELRALRPDLGVVALRGNVDTRLRKLADGQAAAIVLAVAGLERLD 167
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ ++ P+PGQGA+ +ET ++ +A+ I D + ERA + L
Sbjct: 168 RG--AAIGAVLDQLVPAPGQGALALETRADDDRARAAAAAITDADAAACLAAERALVRRL 225
Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-DAINIGRDAA 293
+C + + A L V DG + + D G A
Sbjct: 226 GATCHTPLGAHAVRTADGGLRLRSFVGLPDGSAWLRDELSAAAGIDPETFGVAAG 280
>gi|150020602|ref|YP_001305956.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429]
gi|149793123|gb|ABR30571.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429]
Length = 279
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/249 (32%), Positives = 128/249 (51%), Gaps = 8/249 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR S LAL + L ++ +P + I P+ TKGDR + +IGGKG+F
Sbjct: 2 KIRVGTRKSKLALIQTQLVVNKLKEL--LPNIDFEITPVVTKGDR-LKTPIDKIGGKGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+IEK ++ ++D A+HS KD+P+K+ L +++ L RE DVFI ++ +L
Sbjct: 59 VSDIEKLILDDKLDIAIHSMKDLPSKIPDKLFLTSVLKRECPNDVFIGK--ENFFNLKKG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS RR + R DI ++ RG ++TR+ K+ + I++A AG+ RL +
Sbjct: 117 AKIGTSSKRRALQINMLRPDIEIVPIRGNVDTRIKKI--GELDGIVIAAAGVIRLGLKDK 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELDGS 243
I + E P+P QG + +E K E +K I T ER L+ L+
Sbjct: 175 ITNLFEFEKIVPAPCQGILALEFSEKFLKPFEEIKDVIVDPKTEVETQIERKILSLLNFD 234
Query: 244 CKSAIAGFA 252
C + +
Sbjct: 235 CNTPFGFYC 243
>gi|227496731|ref|ZP_03927005.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434]
gi|226833762|gb|EEH66145.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434]
Length = 402
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 90/380 (23%), Positives = 147/380 (38%), Gaps = 77/380 (20%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEI 58
M R+GTR S LAL + L + + ++P+ T+GD L+++
Sbjct: 1 MS--TVRLGTRGSALALTQSGLVARMLEQAAALAGQELHVELVPVRTRGDVDP-TALSQL 57
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-S 117
GG G+F + + L++GE D AVHS KD+PT + GL+I+A RED RDV + A
Sbjct: 58 GGVGVFATALREALLAGECDLAVHSYKDLPTAAVPGLRIAAVPAREDPRDVLCTRAATLG 117
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NN 163
L DL + +GT S RR A LL R D++++ RG + TRL ++
Sbjct: 118 LHDLPAGARVGTGSPRRSAQLLAQRPDLTIVPIRGNVPTRLARVVGSVVSADGPMGATAE 177
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEI---------------------------LNIEDFPP 196
A +LA +G++RL E + P
Sbjct: 178 PDLDAAILALSGMRRLGLEDYASQPLAARCGARSQVEVQGIPDGGSAAGSPATTEPWMLP 237
Query: 197 SPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
+ QGA+ +ET P + +++ T + ER+ + L C + + A
Sbjct: 238 AAAQGALAVETRDRVSCELPVLTVALALVDDPVTRACADAERSLMRCLAAGCAAPVGALA 297
Query: 253 Y---CKGS-----------------------TLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
G + +V + DG S G +A
Sbjct: 298 RPLDVAGEPAAGRDLPTEPGTALEPGPDQAPAICLEALVASLDGTQLRRASATGTLEEAE 357
Query: 287 NIGRDAAQYIRFISNKNVFN 306
++GR A+ + + +
Sbjct: 358 DLGRCVAERLLADGAAQITD 377
>gi|86739201|ref|YP_479601.1| porphobilinogen deaminase [Frankia sp. CcI3]
gi|86566063|gb|ABD09872.1| hydroxymethylbilane synthase [Frankia sp. CcI3]
Length = 395
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 91/344 (26%), Positives = 141/344 (40%), Gaps = 59/344 (17%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
S LALA + ++L + ++P+ T GDR + +++IGG G+F + L
Sbjct: 49 SALALAQSGTVAATLRARV---GCAVELVPIVTAGDRSSGE-ISQIGGTGVFVSALRDAL 104
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132
+SGEID AVHS KD+PT GL ++A PR D RDV ++ + + L +L + I T S
Sbjct: 105 LSGEIDLAVHSLKDLPTATPPGLVLAAVPPRADPRDVLVAPSGRRLAELRAGARIATGSP 164
Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
RR A L + V+ RG ++TRL K + + A++LA+AG+ RL + + EIL
Sbjct: 165 RRAAQLRALGLGLEVVTIRGNVDTRLKKAIDGEVDAVVLAHAGLARLDRLDAVTEILEPT 224
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKV-------------------------------- 220
P+PGQGA+ IE
Sbjct: 225 VMLPAPGQGALAIECTGGAGLVVAGPARALVPAGPGSGPAVGQTGGETWSDGGQPVDTGL 284
Query: 221 -------INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC----------------KGS 257
++ + +V ERAFLA ++ C + + A
Sbjct: 285 AELLRFVLDDASSSVAVRAERAFLAGIEAGCTAPVGALAELLPELAEGAAAEAGGAPPAG 344
Query: 258 TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301
L +V A DG G+ D +G+ A +
Sbjct: 345 RLCLRAVVAAPDGSDVLRRDVTGSAVDPEALGQRLADDMLSAGA 388
>gi|221059912|ref|XP_002260601.1| Porphobilinogen deaminase [Plasmodium knowlesi strain H]
gi|193810675|emb|CAQ42573.1| Porphobilinogen deaminase, putative [Plasmodium knowlesi strain H]
Length = 449
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 93/374 (24%), Positives = 159/374 (42%), Gaps = 71/374 (18%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K IGTR SPLA+ + + R+ L K I + + T GD I ++ + GGK
Sbjct: 65 KEIIIGTRDSPLAIKQSEKVRTKLEAYFKKVNKNVKITLKSIKTMGDNILDQKVDLFGGK 124
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---------S 112
G+FT+E++++LI G++ VHS KD+P +L + +Q+S +L R+ I D F+
Sbjct: 125 GIFTKELDEELIKGKVHICVHSLKDVPMELPEQVQLSCFLKRDTINDAFLSVKYGTLEDM 184
Query: 113 HTAQSLKDLALHSV------------------------------IGTSSLRRKALLLRWR 142
+ + + S IGTSSLRR + +
Sbjct: 185 NKMKMANKMEEGSYQPKGMSQRVINQNVKRDNYEGDHYDNFIPTIGTSSLRRSSQIKYKY 244
Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR------------------------ 178
+++V + RG I TR+ KL N + AI++A G++R
Sbjct: 245 KNVAVKNMRGNINTRIAKLCNGQYDAIIIAKCGLERLTTKKGIRNIIGGKNKVTPKNFLI 304
Query: 179 ------LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
+ + + +N P+ QG I + +H ++ +++K IN E N
Sbjct: 305 NYNNTEINLTSLHIQQINKRTIYPALCQGIIAVSSHKSDKYISDVLKNINDEKAQIMANI 364
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292
ER+FL +++G+C I G+A + F ++ G+ + V G I A
Sbjct: 365 ERSFLYQIEGNCMMPIGGYAKIVNGEIVFNAVINDIHGREKYHVREVGKVESYNEIAVMA 424
Query: 293 AQYIRFISNKNVFN 306
A ++ + FN
Sbjct: 425 ATKMKEKIGTHRFN 438
>gi|284166931|ref|YP_003405210.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511]
gi|284016586|gb|ADB62537.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511]
Length = 380
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 89/362 (24%), Positives = 149/362 (41%), Gaps = 61/362 (16%)
Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
M + R+ TR S LA A + +L D + + ++ + T GD+I + + +G
Sbjct: 1 MRTRGTLRLATRGSTLARRQASLVKEALEDRR----YEVELVTVETTGDQIRDELIHRLG 56
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G F E++++++ G++D AVHS KDMPT+ + L +A R DV I+ +L+
Sbjct: 57 KTGAFVRELDERVLEGDLDGAVHSMKDMPTEQPQDLVTAAVPERGPPGDVLITPDGSTLE 116
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAI 169
+L + +GTSSLRR+A LL R D+ V RG ++TRL KL ++A
Sbjct: 117 ELPDGATVGTSSLRRRAQLLSERPDLEVEPLRGNVDTRLEKLLAPSLQEEHQERSEADKE 176
Query: 170 LLAYAG--------------------------------------------IKRLKKEKVI 185
AG ++R +
Sbjct: 177 RKGNAGDDDYEPEYDRTVDEWFDDLSELERQAMEREVETEYDAIVLAQSGLERSGLAHSV 236
Query: 186 KEILNIE-DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
F P+PGQGA+ + T + A+++ I+ + ER LAEL G C
Sbjct: 237 DYRELPTGTFVPAPGQGALAV-TARDGETARDIQSAIDFPRSRVETTVERTILAELGGGC 295
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+ + +A +G ++ V DG+ E SR+ R+ A+ + +
Sbjct: 296 IAPVGIYAVVQGEYVHATVNVFDRDGEESVEGSRDLPVEAHAEAAREFARDLADRGAAEL 355
Query: 305 FN 306
Sbjct: 356 IE 357
>gi|168334266|ref|ZP_02692463.1| uroporphyrinogen III synthase/methyltransferase [Epulopiscium sp.
'N.t. morphotype B']
Length = 785
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 11/300 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
F +GTR S LA+A + + + + P I + TKGD IT L +IG KGLF
Sbjct: 4 TFTVGTRGSALAIAQTKQIIALMQQQN--PDATFSIKIIQTKGDAITEIPLDKIGDKGLF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--AQSLKDLA 122
EIE +L+SG+ID A+HS KD+P+ + GL I+ R +D + SL +
Sbjct: 62 VSEIEHQLLSGQIDIAIHSYKDLPSNITPGLIIAHPPARAPRQDALVLRDGTISSLDAIP 121
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
++ I T SLRRK LL R D++V+ RG I+TRL KL + I++A AG+ RL
Sbjct: 122 RNATIATGSLRRKLQLLHHRPDLNVVPIRGNIDTRLKKL--SDVDGIVIAAAGLARLDLA 179
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I + + P+ QGAI I+ + A I+ T V+ ERAFL+ +DG
Sbjct: 180 HKISYLFPEDILVPAAAQGAIAIQCRATDTTAIACANSISDSTTALEVSAERAFLSAIDG 239
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299
SC + A+ T+Y I + F S + A +G A+ +
Sbjct: 240 SCHIPVGATAHLIDDTMYLKAIFGNT--TTFITHSAEAHVTTEIQAQALGIATARSVLAQ 297
>gi|68068433|ref|XP_676126.1| porphobilinogen deaminase [Plasmodium berghei strain ANKA]
gi|56495675|emb|CAH94424.1| porphobilinogen deaminase, putative [Plasmodium berghei]
Length = 383
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 96/358 (26%), Positives = 168/358 (46%), Gaps = 54/358 (15%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60
K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ GG
Sbjct: 15 NKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFGG 74
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S +SL+D
Sbjct: 75 KGIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLRD 134
Query: 121 LAL------------------------HSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
+ I TSSLRR + + ++ + RG I T
Sbjct: 135 INKELSQKNITNNISSSSHVIDKDIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINT 194
Query: 157 RLNKLNNNKAHAILLAYAGIKR----------------------------LKKEKVIKEI 188
R+ KL N +I++A+ G++R + ++ +
Sbjct: 195 RIAKLFNETFDSIIIAFCGLERLISKKVLGQIMKNNIKSKPYIINYKDISIDLSRLNIQK 254
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
LN P+ QG I + ++ NN + +++K IN+E + + ER FL ++DGSC I
Sbjct: 255 LNTNIMCPALCQGIIAVTSNKNNSEISQILKNINNEKSQIMGSIERTFLHKIDGSCTMPI 314
Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G+ + ++F I+ +G +++ + + I +AA+ I+ FN
Sbjct: 315 GGYTKFSKNKIFFNAIINDINGLENYKIKVVRHLNNLDGIADEAAEKIKEKIGIEQFN 372
>gi|291518806|emb|CBK74027.1| porphobilinogen deaminase [Butyrivibrio fibrisolvens 16/4]
Length = 239
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 115/238 (48%), Gaps = 7/238 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
++GTR S LAL L P + ++ + T GD +R L +IG KGLF
Sbjct: 3 IKVGTRGSKLALVQTNYVIEQLKKA--FPENEYEVVVIKTTGDIDQSRPLDQIGSKGLFV 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EIE+ L++ EI AVHS KDMP+K KG + RED RDV I S+++L ++
Sbjct: 61 DEIERALVADEIQLAVHSMKDMPSKPAKGCVFAKSWTREDARDVIIFREVDSIEELPKNA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-----HAILLAYAGIKRLK 180
I T S RR LL R D+ + RG I+TRL KL + I+LA AG+ RLK
Sbjct: 121 KIATGSKRRSYQLLSLRPDLELCPIRGNIDTRLRKLVEGNSDGTILDGIVLAAAGLNRLK 180
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+IL +++ PSP QG + IE + + S FL
Sbjct: 181 ISLDHYQILEVDEMIPSPAQGTLAIELNEKIKSFLIWSIHYQMKRQIISHIWREVFLK 238
>gi|167737626|ref|ZP_02410400.1| porphobilinogen deaminase [Burkholderia pseudomallei 14]
Length = 246
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 137/236 (58%), Gaps = 2/236 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRAL 246
>gi|295395608|ref|ZP_06805802.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030]
gi|294971627|gb|EFG47508.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030]
Length = 821
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 13/305 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA + + + + I+ + T+GD L +GG G
Sbjct: 498 TRTVRLGTRRSNLARSQSVGVAQDIAAHTGW---RVEIVEVVTEGDVNM-TPLANMGGTG 553
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + + L+SG+ID AVHS KD+PT G+ ++A PR D DV ++ + L
Sbjct: 554 VFVSAVRQALLSGKIDIAVHSLKDLPTAQAPGITLAAVPPRVDPSDVLVARDGLTFDTLP 613
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+V+GT S RR A + R D+ + RG ++TR+ + + + A++LA AG++RL +
Sbjct: 614 QGAVVGTGSPRRAAQMRAARPDLDIRGVRGNVDTRIKYVTDGRLDAVVLAAAGMRRLGRL 673
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-------INHEDTWDSVNCERA 235
+ + L E P+PGQGA+ IE N + I+ E T+ +V ERA
Sbjct: 674 AEVSQTLTTELMLPAPGQGALAIECRAENADREPFDAKLRSGLLAIHDETTYRAVVAERA 733
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAA 293
L+ C + I A ++ ++ GK N AI++G A
Sbjct: 734 ILSRAQAGCSAPIGALANVTERSIELSAVMADDAGKLARITRSVANTGVNAAIDVGTQIA 793
Query: 294 QYIRF 298
+
Sbjct: 794 DELLD 798
>gi|268324707|emb|CBH38295.1| porphobilinogen deaminase [uncultured archaeon]
Length = 290
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 13/297 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR S LAL + L ++ I + + GD +T+R L E+ G+F
Sbjct: 1 MIVGTRGSNLALVQTKKVCERLSEL----GVECEIKTVQSLGDVMTDRGLYEMPTIGVFV 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++++ L+ +ID AVHS KDMP++ + L SA LPR+ D +S L D+ +
Sbjct: 57 KKLDMMLLDAKIDIAVHSMKDMPSEREEELDTSAVLPRDSPYDALVSRY--RLDDMPEGA 114
Query: 126 VIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
VIGTSS+RR+ L + + ++ D RG ++TR+ K + +++LA AG +RLK
Sbjct: 115 VIGTSSVRRRYQFLNYVGERGVKVTIKDIRGNVDTRIAKFRRGEYDSVILAEAGFERLKL 174
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ E L+ + F PSP QG I + + ++ E++K I+ +T E L +
Sbjct: 175 DIE-YERLDRDPFVPSPRQGIIAVVARRGSKES-EILKQIDDSETRIEAEVEEEVLKVIG 232
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
G C + A KG ++ V ASD + E G + R+ AQ +
Sbjct: 233 GGCSLPVGVHATAKGGSVELAVYVAASDVRYKLEKVVLGK-DYYMEETRELAQKFKS 288
>gi|167900391|ref|ZP_02487792.1| porphobilinogen deaminase [Burkholderia pseudomallei 7894]
Length = 245
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 136/235 (57%), Gaps = 2/235 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
I+ +L+++D P+ GQGA+ IE + ++ + +V ERA
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRA 245
>gi|315650219|ref|ZP_07903294.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986]
gi|315487576|gb|EFU77884.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986]
Length = 309
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 26/313 (8%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+ RIGTR S LALA ++ + P I +P++T GD+ + +L EIGGKG
Sbjct: 4 KEIIRIGTRKSALALAQTKLVGDAVK--NSFPHIKIEYVPMNTIGDKRLDISLQEIGGKG 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----SL 118
LFT+E+E+ LI G+ID A+HSAKD+P + L++ L R +RDV + +
Sbjct: 62 LFTKELEEALIKGDIDLAIHSAKDLPLEFDNRLKLMPVLKRGAVRDVLVVKNDCPVDLQI 121
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
KDL IGTSS RR + +I ++ RG + TR+ K+ + ++LA AG+ R
Sbjct: 122 KDLPRGFRIGTSSKRRSEQAMLLNHNIKIVPIRGNVLTRIGKIFSGDTDGVILARAGLDR 181
Query: 179 LKKEKVIKEILN------------IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226
L + + D P+P QG +C + + E++K I ED
Sbjct: 182 LLADTNCAGECDKILQKVNITDIKETDILPAPAQGILCGQ--YASDYISEVLKKIQDEDC 239
Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286
N ER +L+ L+ C ++ + +GK S + D +
Sbjct: 240 NILFNAERKYLSVLEADCHTSAGIYIKKDRDNYSIKAYF---EGKYQIAYSDSKGLFDMV 296
Query: 287 NIGRDAAQYIRFI 299
+ A ++
Sbjct: 297 E---NTANKLKRK 306
>gi|88854547|ref|ZP_01129214.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1]
gi|88816355|gb|EAR26210.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1]
Length = 290
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 92/292 (31%), Positives = 141/292 (48%), Gaps = 11/292 (3%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A +L IIP+ST+GDR + +L+ IGG+G+F + L++GE
Sbjct: 1 MAQTTTVARALESKT---GVETEIIPISTQGDR-STESLSTIGGQGVFANALRDALLAGE 56
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
D VHS KD+PT + GL I+A R D RDV + +L+ L + +GT S RR+A
Sbjct: 57 CDVVVHSLKDLPTAEVPGLTIAAVPKRADERDVVCARDGLTLETLPAGARVGTGSPRRQA 116
Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196
L D+ V+D RG I++RL+K+ + A++LA AG+ R + + E L I +P
Sbjct: 117 QLRSLYPDLEVVDLRGNIDSRLDKVTDGHLDAVILAAAGLARAGRSDAVTEHLGIAGWPT 176
Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256
+PGQGA+ IET K V++H+ + + ER LA LD C + + A
Sbjct: 177 APGQGALAIETRTGEEKL---AAVLDHKPSRTKTDAERYVLAFLDAGCSAPLGAHAVIDD 233
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFISNKNV 304
L+ V A DG + S D A + A + ++
Sbjct: 234 GLLFLDARVYALDGSRYLTSSHALYVNDVEDPAREAAQRVADELLAQGAGDL 285
>gi|108804800|ref|YP_644737.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941]
gi|123069014|sp|Q1AUK3|HEM3_RUBXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108766043|gb|ABG04925.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941]
Length = 305
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 150/300 (50%), Gaps = 7/300 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+GTR SPLALA A + L + + + T DR + L+ I + +FT
Sbjct: 5 LVLGTRGSPLALAQAEACAAGLRAA----GFAVELRRIRTTSDRRPDDPLSVIDQRDVFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
++++ L++GE+D AVHS KD+PT++ +G+ ++A R D D +S + L +
Sbjct: 61 RQLDEALLAGEVDLAVHSMKDVPTEVPEGIVLAAVAGRADPSDALVSEGGWGVDGLPEGA 120
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+ TSSLRR+A LL R D+ V++ RG ++TR+ K+ A A++LA AG+ RL E V
Sbjct: 121 RVATSSLRRRAQLLHRRPDLRVVEIRGNVDTRIRKMRAGAAEAVVLARAGLVRLGLE-VP 179
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + P+ GQGA+ + +P+ +E+ + +N V ERA L L+G C+
Sbjct: 180 HAVIPHDVLLPAVGQGALAVAVRRGDPRLEEIRRALNDPAAEREVAAERALLRALEGGCR 239
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ A G + G+V++ DG G + + R A + +
Sbjct: 240 VPVGARAVAGGRGVLLRGVVVSPDGAALCGGEERGEEPEEVG--RRLAARLLERGAAGIL 297
>gi|291295782|ref|YP_003507180.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
gi|290470741|gb|ADD28160.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279]
Length = 300
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 139/265 (52%), Gaps = 12/265 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL A + L + + ++ + T+GDR +R ++ G+G FT
Sbjct: 4 VRIATRGSRLALWQAGWVQQQLERL----GAQVELVVVETQGDRE-SRPFAQMQGQGFFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA--- 122
+ ++ +++ E D AVHS KD+P+ +GL+I+A RED R++ + +
Sbjct: 59 KAVQDAVLNWEADLAVHSFKDLPSARPEGLEIAAVPKREDPRELLLVRPEALDEAAPGLP 118
Query: 123 --LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
++ GTS+ RR+A L + R D+ + + RG + TR++KL + AILLAYAG+KRL+
Sbjct: 119 LRSGALAGTSAARRQAQLRQLRPDLGLKELRGNVPTRVDKLRCGEYDAILLAYAGLKRLE 178
Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ + ++L P+P QGA+ +E ++ + + L++ ++ +V ER +
Sbjct: 179 LDLSGLYTQVLPTTVLVPAPAQGALALECRSDDHRLKALLQPLDDPQARRTVEAERGLMQ 238
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYG 263
+L G C+ A+ A L
Sbjct: 239 KLAGGCQLALGALAQAGPQGLMLLA 263
>gi|291523525|emb|CBK81818.1| porphobilinogen deaminase [Coprococcus catus GD/7]
Length = 799
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 143/314 (45%), Gaps = 32/314 (10%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ ++ V P I I TKGDR +++L+ G KG FT+E+E ++ G
Sbjct: 1 MVQTEMAAEAIKKV--FPSIEIEIAGFETKGDRHLDKSLSAFGSKGAFTKELEGAMLDGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLALHSVIGTSSLRR 134
ID AVHSAKD+P +L +GL + A L R D RDV++ +++ +V+GT SLRR
Sbjct: 59 IDLAVHSAKDLPVELPEGLTVGAVLKRGDSRDVWVSLRREFSIIEECKEKTVVGTGSLRR 118
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL----- 189
+ + + + D RG + TRL KL++ I+LA AG+KRL E
Sbjct: 119 ALQIQQICPGVDIRDIRGNVPTRLKKLSDGMYDGIILAAAGLKRLGYLSEDCETEGSFEA 178
Query: 190 ----------NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E F P+ GQG I +ET ++ ++ I+ EDTW ER+FL
Sbjct: 179 EEQTFFYEILSKEQFLPAAGQGIIALET--RQKDCEDCMQAIHDEDTWQMFLTERSFLRA 236
Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--------NRCDAINIGRD 291
+ G C A A G + DG E + G +R A+++G
Sbjct: 237 IGGGCNEAAAVDVRMDGQKVSVRARYAG-DGLHMKEKTVTGTRCGNIEEDRKLAVSLGEQ 295
Query: 292 AAQYIRFISNKNVF 305
A + + K
Sbjct: 296 MAARL--QNGKVYL 307
>gi|167814759|ref|ZP_02446439.1| porphobilinogen deaminase [Burkholderia pseudomallei 91]
Length = 240
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 135/230 (58%), Gaps = 2/230 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
I+ +L+++D P+ GQGA+ IE + ++ + +V ER
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAER 240
>gi|311895212|dbj|BAJ27620.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054]
Length = 304
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 95/303 (31%), Positives = 133/303 (43%), Gaps = 10/303 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIGGKG 62
+G+R S LA A E + L + P + GD L +E GG
Sbjct: 4 LVVGSRASQLARAQVKEFLAPLRA--RFPEVAFRHRVILEDGDLDRKSDLRAVSERGGGS 61
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
F L+ E+D VHS KD+PT GL + PR D+RD L L
Sbjct: 62 AFAGRQAAALLDREVDVVVHSLKDLPTADPDGLLLLPSPPRADVRDAL---CGAPLAGLP 118
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +GTS+ RR A LL R D++ RG + TRL +L A++LA AG+ RL ++
Sbjct: 119 TGARVGTSAARRIAQLLYVRPDLAPERIRGNVPTRLTRLRT--LDAVVLAAAGLHRLGRD 176
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242
I E+L + FPPSPGQGA+ I+ ++ A+EL+ T V ERA LAEL G
Sbjct: 177 GEIAELLPLAQFPPSPGQGALGIQVRADDAMARELLAGTGDPVTDAEVRAERAMLAELHG 236
Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302
C + A L +G V G E +G +GR A + +
Sbjct: 237 GCSVPVGAHATTADGILTLHGQVTTPRGTRQIEARLSGTSAAPEKLGRAVAGLLLDQDAE 296
Query: 303 NVF 305
+
Sbjct: 297 CLL 299
>gi|1749684|dbj|BAA13899.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 335
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 19/315 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---KGLF 64
IGTR S LA+ H R L + P II T GD I ++ E K L+
Sbjct: 9 IGTRKSKLAVIHQNY-REELEKHN--PHLEFPIISRDTIGDEILSKAWLEFKRQLAKSLW 65
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121
T E+E L++ + VHS KD+P++ + I+ R D + +++ DL
Sbjct: 66 TRELEALLVTNQCRILVHSLKDLPSENARWYGIACIPKRSCPLDAIVFKAGSHYKTVADL 125
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179
SV+GTSS+RR+ALL R + +D RG + TRL KL+ +++ ++LA AG+ RL
Sbjct: 126 PPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRL 185
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ I ++L + GQGA+ +E ++ + E++K + H++T + ERA +
Sbjct: 186 GLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKR 245
Query: 240 LDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRD 291
L G C I + G VL++DG + + +A +G
Sbjct: 246 LQGGCAIPIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGIT 305
Query: 292 AAQYIRFISNKNVFN 306
A + +
Sbjct: 306 VALALLKNGAGPILE 320
>gi|319440758|ref|ZP_07989914.1| hypothetical protein CvarD4_03233 [Corynebacterium variabile DSM
44702]
Length = 336
Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats.
Identities = 89/337 (26%), Positives = 139/337 (41%), Gaps = 39/337 (11%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEI 58
M + IGTR S LA R +L+D + + T GD ++ I
Sbjct: 1 MT-RTLLIGTRASALASTQTGMVRDALVDNGATADLHF----VHTPGDASQKAQTPVSRI 55
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G+FTE + L +GE D AVHS KD+PT PR D R+V +SH +L
Sbjct: 56 G-VGVFTETLRNALAAGECDVAVHSFKDLPTAPDPRFIA-VVPPRVDPREVLVSHGNLTL 113
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK---------LNNNKAH-- 167
++L + IGT + RR + + R D+ I RG I+TR+ + +
Sbjct: 114 RELPTGAKIGTGAPRRVSQIRAVRPDVECISIRGNIDTRMGRAGDGTTSTVVEGGPGDLA 173
Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
A++LA AG++R+ E + + D P+P QGA+C+E ++ +A V ++ +
Sbjct: 174 AVVLARAGLERVGHLDHAAETVAVTDIMPAPAQGALCVEVRADDAEAVAAVLGLDDPASH 233
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFH--EVSRNGN 281
ER LA L+ C + + ++ + L A DG E S +
Sbjct: 234 ARAVAERGVLATLEAGCTAPVGAYSEFGTAEDAAILTLQAGAFALDGSTRVVREASVTID 293
Query: 282 RCD-------------AINIGRDAAQYIRFISNKNVF 305
D A +GR Q + V
Sbjct: 294 LSDVGADPLHPRWRDAARELGRTVGQKLLDAGAAEVI 330
>gi|119963156|ref|YP_948463.1| porphobilinogen deaminase [Arthrobacter aurescens TC1]
gi|119950015|gb|ABM08926.1| porphobilinogen deaminase [Arthrobacter aurescens TC1]
Length = 332
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 149/317 (47%), Gaps = 33/317 (10%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL +T L V P + ++ + T+GD + +L+++GG G+F
Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIKTEGD-VKTGSLSQMGGTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L++ D AVHS KD+PT GL I+A R D+RDV + +L L
Sbjct: 58 VAALRDALLADACDVAVHSLKDLPTGAALGLSIAATPKRVDVRDVLCARDGMTLAQLPGG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NNNKAHAIL 170
+ +GT S RR A L R DI V+D RG ++TRL ++ + A++
Sbjct: 118 AKVGTGSPRRAAQLRAARPDIEVLDIRGNVDTRLGRVPGLPGNTTDEVVQGKSCDLDAVV 177
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------------ 218
LA AG++R+ + + E + P+PGQGA+ IE + +
Sbjct: 178 LAAAGLERMDRLDTVSEFFESDVMLPAPGQGALAIECRTEDAPSVAGSAEGADGVLAQAL 237
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
+N DT +V ERA LA L+ C + + +A+ KGS L+ +V A DG +
Sbjct: 238 AALNDHDTRLAVTAERAVLARLEAGCAAPVGAYAFRKGSMLHLEAVVCAVDGTKTVREKK 297
Query: 279 -NGNRCD--AINIGRDA 292
+ A +G +
Sbjct: 298 ATDGLTEVGATLLGIEV 314
>gi|15920398|ref|NP_376067.1| porphobilinogen deaminase [Sulfolobus tokodaii str. 7]
gi|25453026|sp|Q976H1|HEM3_SULTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|15621180|dbj|BAB65176.1| 294aa long hypothetical porphobilinogen deaminase [Sulfolobus
tokodaii str. 7]
Length = 294
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 10/294 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S L+ + L + I + TK D N L+++G KG+F
Sbjct: 3 IRIAARGSKLSRIQVMMVENYLHKL----GIETEFIEIKTKADLFQNEPLSKLG-KGVFE 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ + ++ + D AVHS KD+ T++ + L+I A LPR+ D+ IS ++L +L +S
Sbjct: 58 KEVNQAVLDNKADVAVHSMKDILTEISENLEIYAVLPRDPPFDILISR--KNLFNLEPNS 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+IGTSS+RRK L +R+D+++ D RG I+TRL K + I++A A I RLK E+V
Sbjct: 116 IIGTSSIRRKNFLTFYRNDLNIKDLRGNIDTRLKKYFEGQYDGIIIAEASIYRLK-EQVQ 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
L+ F P QG I + + +++ IN +DT + ER L+ + G C
Sbjct: 175 YYRLDPHLFTPEANQGIIVVIGRKKDETIKKIFNEINDKDTLEIAIAERKALSIVGGGCH 234
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I + F+GI+ +S G+ + + G +
Sbjct: 235 SPIGVYFEKYDKD--FHGIISSSFGRKKITIEEYFHNMTPYEAGELLGKRFLEE 286
>gi|116671313|ref|YP_832246.1| porphobilinogen deaminase [Arthrobacter sp. FB24]
gi|116611422|gb|ABK04146.1| hydroxymethylbilane synthase [Arthrobacter sp. FB24]
Length = 332
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 30/300 (10%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LAL +T L + P + ++ + T GD + +L+++GG G+F
Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAIGGFP---VELVHIRTDGD-VLTGSLSQMGGTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ + L+ + D AVHS KD+PT GL ++A R D+RDV + L DL
Sbjct: 58 VAALREALLRDDCDVAVHSLKDLPTGAAPGLNLAATPKRVDVRDVLCARDGFKLADLPQG 117
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NNNKAHAIL 170
+ +GT S RR A L R D+ V+D RG ++TRL ++ + A++
Sbjct: 118 ARVGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLGRVPGLPGNTTDAVVLGKSCDLDAVV 177
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ------------ELV 218
LA AG++R+ + + E L + P+ GQG++ IE + + + +
Sbjct: 178 LAAAGLERIGRLDTVSEYLETDVMLPAAGQGSLAIECRTADAPRRTGSTEGSQGPLAQAL 237
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
++ DT +V ERA LA L+ C + + +A+ KGS LY V A DG R
Sbjct: 238 AALDDTDTRLAVTAERALLARLEAGCAAPVGAYAFRKGSMLYLEAAVCAVDGSATVRDKR 297
>gi|152964587|ref|YP_001360371.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216]
gi|151359104|gb|ABS02107.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216]
Length = 326
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 13/301 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M +P R+GTR S LA + L + ++ ++T+GD L +IGG
Sbjct: 1 MT-RPLRLGTRRSALATTQSSWVADLLRR----GGSPVELVEITTRGDVDR-APLAQIGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L++GE+D AVHS KD+PT GL ++A RED RDV ++ +L D
Sbjct: 55 TGVFVSALRDALLAGEVDLAVHSLKDLPTSAADGLALAAVPGREDPRDVLVAAGGATLAD 114
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR+ALLL R D+ V+ RG ++TR+ + A++LA AG+ R
Sbjct: 115 LPRGARVGTGSPRRRALLLALRPDLDVVAVRGNVDTRIGFATGGELDAVVLAAAGLARTG 174
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ E+ E F P+PGQGA+ +E ++ + + ++ +V ER LA L
Sbjct: 175 RLHEASELFAPEVFVPAPGQGALAVECRADDAEVLAALAALDVPAVRWAVAAERQVLASL 234
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297
+ C + + A G L+ V DG + D A +G A +
Sbjct: 235 EAGCSAPVGAHAA--GGVLHV--AVEDPDGALVRRAVPAAGLDDEGAARRLGASVAADLL 290
Query: 298 F 298
Sbjct: 291 E 291
>gi|167823214|ref|ZP_02454685.1| porphobilinogen deaminase [Burkholderia pseudomallei 9]
Length = 233
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 85/220 (38%), Positives = 130/220 (59%), Gaps = 2/220 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
I+ +L+++D P+ GQGA+ IE + ++
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDH 230
>gi|257387166|ref|YP_003176939.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286]
gi|257169473|gb|ACV47232.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286]
Length = 377
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 60/357 (16%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+ TR S LAL A +L + + I+ + T GD+I + + +G G F
Sbjct: 6 TVRLATRGSDLALRQAATVTETLEAR----GYTVEIVEVETTGDQIRDELIHRLGKTGAF 61
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
++++++ GE+D AVHS KD+PT+ + L ++ RE DV ++ ++ +L
Sbjct: 62 VRSLDEQVVDGEVDAAVHSMKDVPTEQPEELVVAGVPQRESPDDVLVTPDGATVDELPDG 121
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN-----------------------KL 161
+ +GTSSLRRKA LL R D+ V RG ++TR+ K+
Sbjct: 122 ATVGTSSLRRKAQLLAERPDLDVQPLRGNVDTRIEKLLAPTLQSEHEERSEAEKEQKEKV 181
Query: 162 NNNKA-------------------------------HAILLAYAGIKRLKK-EKVIKEIL 189
++ + A++LA AG++R V + L
Sbjct: 182 DDEEYEFPYEQDVETWFDGLTEIERQALGREVETAYDAVVLARAGLERAGLLHHVEYQSL 241
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
F P+PGQGA+ + T ++ A+EL ++H + ER L EL G C + +
Sbjct: 242 PTGTFVPAPGQGALAV-TATDDEFARELNDALDHPRSRAETTVERTVLDELGGGCVAPLG 300
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
A +GS + VL G+ +R+ + ++ R A + ++
Sbjct: 301 VHAILQGSVIRTTVRVLDQAGEREVAATRDLSADRHVDDARAFAADLAEQGGADLIE 357
>gi|163839970|ref|YP_001624375.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209]
gi|162953446|gb|ABY22961.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209]
Length = 290
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74
+A + L + + ++ + T GD + L+++GG G+F + + +++
Sbjct: 1 MARTQSQLIADQLSAIGGF---EVELVQIRTDGD-VLTGPLSQMGGTGVFVTALREAVLN 56
Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134
G +D AVHS KD+PT G++I+A R ++RD S + +SL +LA + +GT S RR
Sbjct: 57 GSVDFAVHSLKDLPTAAAPGMKIAAIPARAEVRDALCSRSNRSLAELATGAKVGTGSPRR 116
Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
A L R+DI VID RG ++TRL +L N A++LA AG+ R+ + I E+ +
Sbjct: 117 AAQLRAARADIEVIDIRGNVDTRLARLE-NDLDAVVLAAAGLGRIGRSAAISELFDDAVM 175
Query: 195 PPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+PGQGA+ +ET ++ P + + I+ D+ +V ERA LA L+ C + + FA
Sbjct: 176 LPAPGQGALAVETALDVPTELAAALAAIDDADSRLAVTAERALLARLEAGCSAPVGAFAQ 235
Query: 254 CKGSTLYFYGIVLASDGKIFHE-VSRNGNRCD--AINIGRDAAQYIRFISNKNVF 305
KGS L + + DG + A +G + A+ + ++
Sbjct: 236 RKGSMLRLEACICSLDGSRVIRQAKATDGLAEVAATLLGIELAESMLADGAADLL 290
>gi|332186913|ref|ZP_08388654.1| porphobilinogen deaminase [Sphingomonas sp. S17]
gi|332012923|gb|EGI54987.1| porphobilinogen deaminase [Sphingomonas sp. S17]
Length = 210
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
FR+GTR SPLAL A R++L D I I+P+ T GDR+ +R L EIGGK L+T
Sbjct: 4 FRLGTRGSPLALTQAHMVRAALADAQGWDEDAIEIVPIKTTGDRVQDRALAEIGGKALWT 63
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+++ L+ GEID +VHS KD+ T L I+A LPR D+RD I A+++ +L +
Sbjct: 64 KELDRALLDGEIDASVHSMKDVETIRPDWLHIAAMLPRADVRDRLI--GAETIAELRPGA 121
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
V+GTSS RR+A LL R D+++ RG ++TRL KL + + A LLA AG+ RL +E +
Sbjct: 122 VVGTSSPRRRAQLLSHRPDLTITLLRGNVDTRLAKLASGEMDATLLAAAGLDRLGRE--V 179
Query: 186 KEILNIEDFPPSP 198
+ + P+P
Sbjct: 180 GHAVPTDQMLPAP 192
>gi|321253441|ref|XP_003192732.1| phorphobilinogen deaminase; Hem3p [Cryptococcus gattii WM276]
gi|317459201|gb|ADV20945.1| Phorphobilinogen deaminase, putative; Hem3p [Cryptococcus gattii
WM276]
Length = 481
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 82/296 (27%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------------------HNI 38
+ F +GTR S LAL L +H +
Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSAAGSKFGETREEGDDAEQGDVPFVHPYTF 88
Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L
Sbjct: 89 TIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148
Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
G +I R D RD + + L+DL +V+GT S+RR A L R ++
Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208
Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
D RG + TR NKL+ + A++LA +G++RL L+ + GQGA+ IE
Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG---FAYCKGSTL 259
+P+ + ++ + H T S ER L L+G C + +
Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESELVELDEDEI 324
Score = 42.1 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 258 TLYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
L + V ++DG + + A G + A+ +R + + +
Sbjct: 386 KLTLHSCVTSTDGTKHVLFTPPPVLVRSYRQAEQFGEECARKLRGMGAGEILD 438
>gi|282857646|ref|ZP_06266861.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455]
gi|282584522|gb|EFB89875.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455]
Length = 245
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 11/252 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE----I 58
K R G+R S LALA ++ H P + + ++P++T+GD + +E
Sbjct: 1 MKTLRFGSRTSDLALAQTRLVMDAVGRAH--PEYRLELVPIATRGDVDM-KPFSEASDTF 57
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G KGLFT E+E+ L+ G ID AVHS KD+P + L + A R D RDV
Sbjct: 58 GIKGLFTRELEEALLDGSIDVAVHSLKDLPAVQDERLPLLACFRRGDPRDVLALPAGAEA 117
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
+ ++IG SS RR+ L V RG + TRL KL+ + A++LA AG++R
Sbjct: 118 MN---GALIGCSSARRRLQALDLFEGAEVRPVRGNVGTRLRKLDEGQFSALILAAAGLER 174
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + ++++ P+PGQG + + K ++ + I D D ERAF A
Sbjct: 175 LGLRARVSRYFSLDEIVPAPGQGILACQ-GRAGDKNEDWLDAIFDPDATDCARAERAFSA 233
Query: 239 ELDGSCKSAIAG 250
L G C S +
Sbjct: 234 ALGGGCASPVGA 245
>gi|260579339|ref|ZP_05847221.1| porphobilinogen deaminase (hydroxymethylbilanesynthase)
(Pre-uroporphyrinogen synthase) [Corynebacterium
jeikeium ATCC 43734]
gi|258602468|gb|EEW15763.1| porphobilinogen deaminase (hydroxymethylbilanesynthase)
(Pre-uroporphyrinogen synthase) [Corynebacterium
jeikeium ATCC 43734]
Length = 359
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 43/338 (12%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGG 60
+ F IGTR S LA R + + + + T GD + +IG
Sbjct: 24 DRTFLIGTRRSALATTQTSHVRDGMQSA----GYAAELHLVHTPGDASQAAQIPVAQIG- 78
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FTE + K L +GE D AVHS KD+PT + R D R+V +S Q L +
Sbjct: 79 VGVFTETLRKALEAGECDVAVHSFKDLPTAPDPRFRT-VVPRRVDPREVLVSRNNQPLLE 137
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+ RR + + R D+ ++ RG I+TR+ + + A++LA AG++R+
Sbjct: 138 LPQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGRTEKDL-DAVVLARAGLERVG 196
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L
Sbjct: 197 QLERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTL 256
Query: 241 DGSCKSAIAGFAYCKGST-----------LYFYGIVLASDGKIFHEVSRNGN-------- 281
+ C + +A ++ L +G V A DG S
Sbjct: 257 EAGCTAPVAAYSEWVQQEGTAEGADKRYVLRVFGGVFAMDGSRKLVRSGEAGFDIPEPTA 316
Query: 282 ---------------RCDAINIGRDAAQYIRFISNKNV 304
A IG D + + +
Sbjct: 317 DEGFPAAEEPRWRECIAAARAIGIDIGRALLEDGAAEL 354
>gi|227828214|ref|YP_002829994.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25]
gi|229585443|ref|YP_002843945.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27]
gi|259646265|sp|C3MZR8|HEM3_SULIA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|259709751|sp|C3MYD9|HEM3_SULIM RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|227460010|gb|ACP38696.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25]
gi|228020493|gb|ACP55900.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27]
Length = 293
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAEKNLDKLDS--N 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +G FYGI SDGK VS + D IG + ++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285
>gi|196232296|ref|ZP_03131150.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428]
gi|196223664|gb|EDY18180.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428]
Length = 307
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 16/280 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIG 59
K +GTR S LA+A T +L P I T+GD+ + +L E G
Sbjct: 1 MKSIILGTRASALAVAQVELTTKALAAA--FPAMQIERREFVTRGDKKLDLSLLRANEAG 58
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKGLFT+E+E L++G ID AVHS KD+P GL I+A L R DV I+ Q+L
Sbjct: 59 GKGLFTKELEDALLNGSIDVAVHSLKDLPGHNPPGLDITAVLERAPTADVLITKQPQTLL 118
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKR 178
DL ++GTSS+RR L R D+ V ++RG ++TRL KL + I+LA AG++R
Sbjct: 119 DLPQGVLLGTSSVRRARQLQWRRPDVRVEEWRGNVQTRLRKLAERDDVTGIILAQAGLER 178
Query: 179 LKKE----------KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
L + ED P+ GQGAI +++ + + +++ I+H +T
Sbjct: 179 LGHDLSAGRLETEHGKFYVTSLAEDLLPAIGQGAIALQSRADRAEVAAVLQKIDHRETHL 238
Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
++ ER L G C + + I+
Sbjct: 239 AIRAERELQRLLAGDCALPVGVRTKLLPGGIAMRAILFGP 278
>gi|16611929|gb|AAL27412.1|AF429957_3 porphobilinogen deaminase [uncultured bacterium]
Length = 299
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/298 (26%), Positives = 138/298 (46%), Gaps = 21/298 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
R+ TR S LAL A L+ + ++ + T+GDR R ++ G+G FT
Sbjct: 4 VRLATRGSRLALWQAEWVAKQLVQQ----GAEVELVVVETQGDREK-RPFAQMQGQGFFT 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-----D 120
+ +++ ++ G D AVHS KD+P+ GL+I+A PRED R++ + +
Sbjct: 59 KAVQEAVLEGRADFAVHSYKDLPSARPAGLEIAAVPPREDPRELLLVRLQAVDQVAPGLP 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +G+S+ RR+A L R D+S+++ RG + TR+ KL + A+LLAYAG++RL
Sbjct: 119 LRAGARVGSSAARRQAQLAHLRPDLSLLELRGNVLTRVEKLRQGEYDAVLLAYAGVRRLG 178
Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ ++L P+P QGA+ +E ++ + + L++ ++ +A
Sbjct: 179 LDLSPFHWQVLPPTLLVPAPAQGALALECRQDDKRLRPLLEPLDDPSAGVRC-GGAGLMA 237
Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
L G C+ A+ A L G+ D + + I
Sbjct: 238 RLAGGCQLALGALAQETPEGLQLLAWY------RGRSYQARGS--DPEAVAEAVFKEI 287
>gi|227830973|ref|YP_002832753.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15]
gi|238620405|ref|YP_002915231.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4]
gi|284998461|ref|YP_003420229.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5]
gi|259709727|sp|C4KIZ9|HEM3_SULIK RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|259709750|sp|C3MJ21|HEM3_SULIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|227457421|gb|ACP36108.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15]
gi|238381475|gb|ACR42563.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4]
gi|284446357|gb|ADB87859.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5]
Length = 293
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAEKNLDKLDS--N 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +G FYGI SDGK VS + D IG + ++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285
>gi|258567590|ref|XP_002584539.1| porphobilinogen deaminase [Uncinocarpus reesii 1704]
gi|237905985|gb|EEP80386.1| porphobilinogen deaminase [Uncinocarpus reesii 1704]
Length = 287
Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 60/320 (18%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
E+K + IGTR SPLAL R +L + +
Sbjct: 5 ERKTYTIGTRKSPLALVQTDLVRRALQTAYPNCDLKV----------------------- 41
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
+PT++ + A +PRE+ RDV +
Sbjct: 42 ----------------------HGHVPTQIPDACVLGAMMPRENPRDVLVIKKGLPWMTL 79
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176
+L SV+GTSS+RR A L R + V D RG I+TRL KL+ + +++A AG+
Sbjct: 80 AELPAGSVVGTSSVRRTAQLARHYPHLVVQDIRGNIDTRLAKLDAEDGPFTCLIMAAAGL 139
Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
R E + + L+ ++ + GQGA+ IE ++ +++V I T + ER
Sbjct: 140 LRTGHENRVTQYLDSKNGKMLHAVGQGALGIEVRTDDEVMKDMVNKIGDMPTTYACMAER 199
Query: 235 AFLAELDGSCKSAIAGFA-YCKGST----LYFYGIVLASDGKIFHEVSRNGN---RCDAI 286
L ++G C + + + + L IV++ DGK E+ ++G+ +A
Sbjct: 200 NLLRTVEGGCSAPLGVETEWIQDDNGKSLLRLRAIVVSVDGKEAVELEKDGDVESIEEAE 259
Query: 287 NIGRDAAQYIRFISNKNVFN 306
G+ A + +
Sbjct: 260 AFGKQVALELIDKGAGKILE 279
>gi|323475281|gb|ADX85887.1| porphobilinogen deaminase [Sulfolobus islandicus REY15A]
gi|323478006|gb|ADX83244.1| porphobilinogen deaminase [Sulfolobus islandicus HVE10/4]
Length = 293
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIINIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAEKNLDKLDS--N 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +G FYGI SDGK VS + D IG + ++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285
>gi|229581489|ref|YP_002839888.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51]
gi|259709752|sp|C3NF70|HEM3_SULIN RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|228012205|gb|ACP47966.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51]
Length = 293
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLKRDPPYDILIAEKNLDKLDS--N 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +G FYGI SDGK VS + D IG + ++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285
>gi|146303002|ref|YP_001190318.1| porphobilinogen deaminase [Metallosphaera sedula DSM 5348]
gi|189028093|sp|A4YD92|HEM3_METS5 RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|145701252|gb|ABP94394.1| hydroxymethylbilane synthase [Metallosphaera sedula DSM 5348]
Length = 290
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 91/299 (30%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+L + L + I + TK D N+ L EIG KG+F
Sbjct: 2 KIRIAARGSKLSLKQVEIVTTYLQAK----GYETEFIEIKTKADLFGNKPLHEIG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G D AVHS KDM ++L GL++ A RE+ DV +S L++L
Sbjct: 57 EKEVNEAVLQGRADIAVHSMKDMSSELPPGLELLATPKRENPVDVLVSELN--LEELPEK 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGT SLRR L R D+ V + RG ++TRL K +++ I+LA AG++RL E
Sbjct: 115 SRIGTGSLRRANFLKVVRPDLVVENIRGNVDTRLRKYRDHEYDGIILAEAGLRRLGVEVK 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L++E F P P QG I + +PK L + +N T E+ + + G C
Sbjct: 175 RF-PLDVESFTPEPNQGIIAVV---GSPKFLGLFQELNDTGTMKEALAEKETVKVVGGGC 230
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFIS 300
S + + L+ GI S+G V +R + +G+ + ++
Sbjct: 231 HSPLGVLFRLEDDVLH--GIASYSNGVKRVTVKLSTRESPQIAGNQLGKALVKAMKDEG 287
>gi|331003909|ref|ZP_08327398.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411929|gb|EGG91329.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 311
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 149/314 (47%), Gaps = 23/314 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S LALA + ++ ++ P I IP+ST GD+ + +L EIGGK
Sbjct: 3 NKNIIRIGTRKSALALAQSKLVGDAI--LNSFPHIKIEYIPMSTAGDKRLDISLQEIGGK 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QS 117
GLFT+E+E+ LI+G ID AVHSAKD+P + L++ L R + D+
Sbjct: 61 GLFTKELEEALINGNIDLAVHSAKDLPLEFDHRLKLMPVLKRAPVNDILAVKKDFLKETD 120
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
+K L IGTSS RR+ LL DI +I RG + TR+ K+ +N ++LA AGI+
Sbjct: 121 IKTLPEGFRIGTSSKRREKQLLFLNKDIKIIPVRGNVITRIEKIFSNDVDGVILAAAGIE 180
Query: 178 RLKK------------EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225
RLK +K+ + +D P+P QG +C E N + + +++ I +
Sbjct: 181 RLKANDKYAAEFKDILDKISIINIREKDILPAPAQGILCAE--YANDEMETILEKIQDGE 238
Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285
ER +LA L C ++ + Y +GK + + +
Sbjct: 239 CNTLFFAERKYLAVLQADCHTSAGIYIYKALDKYSIKAYF---EGKYLEKNMIDSSEKAL 295
Query: 286 INIGRDAAQYIRFI 299
+ + A ++
Sbjct: 296 LEAVEELAGRLKRK 309
>gi|48477321|ref|YP_023027.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790]
gi|55976421|sp|Q6L2G8|HEM3_PICTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|48429969|gb|AAT42834.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790]
Length = 282
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 94/257 (36%), Positives = 142/257 (55%), Gaps = 10/257 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ A + L + + ++KGD + L IGG G+F
Sbjct: 3 IRIGTRSSKLAMIQAMMVKDRLDSL----GIETEVKGFTSKGDINLDSPLYSIGGTGVFV 58
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+++ + ++ EID AVHSAKD+P+ + L+ISA L R+D RDV I + SL DL S
Sbjct: 59 DDLNRMILKNEIDIAVHSAKDIPSFIDDSLEISAVLKRDDPRDVLI--SQHSLNDLEASS 116
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSSLRR L R+DI + D RG I+TRL KL+N I++A A R++
Sbjct: 117 VIGTSSLRRIKELKTLRNDILIKDLRGNIDTRLKKLDNGDYDGIIMAKAAYDRMRI-NRR 175
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
ILN +DF P+P QG I I + + +++K IN ++T++ + ER L+ L+ C
Sbjct: 176 HFILNYDDFVPAPNQGIIAI-ISKKDSEINDVLKKINDDETYNDMKAERLILSGLNLGCS 234
Query: 246 SAIAGFAYCKGSTLYFY 262
+ +A+ + ++
Sbjct: 235 KPVGIYAH--KNRIFMR 249
>gi|229579851|ref|YP_002838250.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14]
gi|259709753|sp|C3N841|HEM3_SULIY RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|228010566|gb|ACP46328.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14]
Length = 293
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L+ L + II + TK D + L+++G KG+F
Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTDPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D +
Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAEKNLDKLDS--N 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL
Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C
Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +G FYGI SDGK VS + D IG + ++
Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285
>gi|58264690|ref|XP_569501.1| hydroxymethylbilane synthase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57225733|gb|AAW42194.1| hydroxymethylbilane synthase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 481
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 82/288 (28%), Positives = 124/288 (43%), Gaps = 35/288 (12%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------------------HNI 38
+ F +GTR S LAL L +H +
Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSGAGSKFGETREEGDDAEQGDVPFVHPYTF 88
Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L
Sbjct: 89 SIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148
Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
G +I R D RD + + L+DL +V+GT S+RR A L R ++
Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208
Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
D RG + TR NKL+ + A++LA +G++RL L+ + GQGA+ IE
Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
+P+ + ++ + H T S ER L L+G C + +
Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESEL 316
Score = 42.1 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 258 TLYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
L + V ++DG + + A G + A+ +R + + +
Sbjct: 386 KLTLHSCVTSTDGSKHVLFTPPPVLVRSYRQAEQFGEECARRLRGMGAGEILD 438
>gi|134109785|ref|XP_776442.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259118|gb|EAL21795.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 481
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 82/288 (28%), Positives = 124/288 (43%), Gaps = 35/288 (12%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------------------HNI 38
+ F +GTR S LAL L +H +
Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSGAGSKFGETREEGDDAEQGDVPFVHPYTF 88
Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L
Sbjct: 89 SIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148
Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148
G +I R D RD + + L+DL +V+GT S+RR A L R ++
Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208
Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206
D RG + TR NKL+ + A++LA +G++RL L+ + GQGA+ IE
Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268
Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
+P+ + ++ + H T S ER L L+G C + +
Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESEL 316
Score = 42.1 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 258 TLYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
L + V ++DG + + A G + A+ +R + + +
Sbjct: 386 KLTLHSCVTSTDGSKHVLFTPPPVLVRSYRQAEQFGEECARRLRGMGAGEILD 438
>gi|207109051|ref|ZP_03243213.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_CA4C1]
Length = 242
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 91/246 (36%), Positives = 131/246 (53%), Gaps = 5/246 (2%)
Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69
+R S LAL A + L I + TKGD+I + L +IGGKGLFT+E+E
Sbjct: 1 SRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFTKELE 57
Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129
+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +GT
Sbjct: 58 ELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGT 117
Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIKEI 188
+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + ++
Sbjct: 118 TSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYRKA 177
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248
++E+ PS GQGA+ +E N+ L + +N E + ER F+ L+G C+ I
Sbjct: 178 FSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEKSAFCCRLEREFIKGLNGGCQIPI 236
Query: 249 AGFAYC 254
A
Sbjct: 237 GVHASL 242
>gi|68536995|ref|YP_251700.1| hypothetical protein jk1901 [Corynebacterium jeikeium K411]
gi|68264594|emb|CAI38082.1| hemC [Corynebacterium jeikeium K411]
Length = 367
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 86/346 (24%), Positives = 145/346 (41%), Gaps = 51/346 (14%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGG 60
+ F IGTR S LA R + + + + T GD + +IG
Sbjct: 24 DRTFLIGTRRSALATTQTSHVRDGMQSA----GYAAELHLVHTPGDASQAAQIPVAQIG- 78
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+FTE + K L +GE D AVHS KD+PT + R D R+V +S Q L +
Sbjct: 79 VGVFTETLRKALEAGECDVAVHSFKDLPTAPDPRFRT-VVPRRVDPREVLVSRNNQPLLE 137
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GTS+ RR + + R D+ ++ RG I+TR+ + + A++LA AG++R+
Sbjct: 138 LPQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGRTEKDL-DAVVLARAGLERVG 196
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L
Sbjct: 197 QLERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTL 256
Query: 241 DGSCKSAIAGFAYCKGST-------------------LYFYGIVLASDGK-IFHEVSRNG 280
+ C + +A ++ L +G V A DG S G
Sbjct: 257 EAGCTAPVAAYSEWVQQEGTADGAVDGTVDGTEKHYVLRVFGGVFAMDGSRKLVRSSEAG 316
Query: 281 -NRCD---------------------AINIGRDAAQYIRFISNKNV 304
+ + A IG D + + +
Sbjct: 317 FDISEPTADEGFPAAEEPRWREYIDAARAIGIDIGRALLEDGAAEL 362
>gi|121591883|ref|ZP_01679047.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121546249|gb|EAX56552.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
Length = 195
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 64/183 (34%), Positives = 97/183 (53%)
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
+++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E
Sbjct: 6 GAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELES 65
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L G
Sbjct: 66 RIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGG 125
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C+ I +A +G T++ +V DG G R A +G A+ + K
Sbjct: 126 CQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGAKE 185
Query: 304 VFN 306
+
Sbjct: 186 ILE 188
>gi|307195489|gb|EFN77375.1| Porphobilinogen deaminase [Harpegnathos saltator]
Length = 313
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 148/296 (50%), Gaps = 39/296 (13%)
Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE 104
TKGD+I +++L +IG K LFTEE+E+ L G +D VHS KD+PT L G+ + A L RE
Sbjct: 3 TKGDKILDKSLPKIGEKSLFTEELEQALGEGSLDFVVHSLKDLPTILPAGMALGALLKRE 62
Query: 105 DIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
D RD + ++L L SVIGTSSLRR A L R + V + RG + TRL KL
Sbjct: 63 DPRDAVVMSKKFKEKTLSTLPKGSVIGTSSLRRTAQLARNLPHLKVENIRGNLNTRLKKL 122
Query: 162 NNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
++ K AI+LA AG+KR+ + I +I+ E+ + GQGA+ +E ++ + + L++
Sbjct: 123 DDEKSAYAAIVLAAAGLKRIGWKDRISQIMEPEEALYAVGQGALGVECRESDWETRSLLE 182
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
+ +T CER+FL L G C + +A + +G L G V + DG+ + +
Sbjct: 183 PLYDMETTLKCVCERSFLKTLGGGCSAPVAVASSLEGEELKITGAVWSLDGQTLIKDTCK 242
Query: 280 G----NRCD------------------------------AINIGRDAAQYIRFISN 301
G + D A +G+D A + +
Sbjct: 243 GKLFIPKDDGEPPRKCPYQEPRLYCGVVPGRMNALSLHGAEQLGKDLANNLIEKNA 298
>gi|313896614|ref|ZP_07830163.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974799|gb|EFR40265.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 190
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG
Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKKMTTKGDKILDAPLAKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFT+E+E+ +++G+ID AVHS KDMP ++ GL I A R D D F+S+ ++++
Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPIEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176
L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ + G
Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGSLTPLYSPRRGC 174
>gi|15897134|ref|NP_341739.1| porphobilinogen deaminase [Sulfolobus solfataricus P2]
gi|284174377|ref|ZP_06388346.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2]
gi|25453029|sp|Q980U4|HEM3_SULSO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|13813317|gb|AAK40529.1| Porphobilinogen deaminase [Sulfolobus solfataricus P2]
gi|261601798|gb|ACX91401.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2]
Length = 293
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 11/295 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I R S L+ L + +I + TK D + L+++G KG+F
Sbjct: 2 KILIAARGSKLSRVQVDMVGEKLRKI----GIEYDVIDIKTKADLFSTEPLSKLG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ +++ L+I A + R+ D+ I+ D +
Sbjct: 57 EKEVNEAVLEGKADVAVHSMKDILSEINPELEIFAVIERDPPYDILIAEKNLHKLDP--N 114
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ IGTSS+RRK + R +I+ D RG ++TR+ K + + ++LA A IKRL +
Sbjct: 115 TTIGTSSIRRKNFIKYIRPEINTKDIRGNVDTRIRKYLSKEYDGLILAEASIKRLNIS-I 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
LN+ DF P QG I + + K +E+ K I H+DT D ERA ++ + G C
Sbjct: 174 SYHRLNVYDFTPEANQGIIVVLGRKKDEKVKEVFKEITHKDTLDEALAERATISVVGGGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S I +G FYGI SDGK VS + D IG + ++
Sbjct: 234 HSPIGVLFRKEGKE--FYGIASYSDGKKKITVSIS-KAGDPYTIGSELGLLLKKE 285
>gi|167844775|ref|ZP_02470283.1| porphobilinogen deaminase [Burkholderia pseudomallei B7210]
Length = 222
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 127/203 (62%), Gaps = 2/203 (0%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190
Query: 185 IKEILNIEDFPPSPGQGAICIET 207
I+ +L+++D P+ GQGA+ IE
Sbjct: 191 IRALLDVDDSLPAAGQGALGIEI 213
>gi|16081675|ref|NP_394046.1| porphobilinogen deaminase [Thermoplasma acidophilum DSM 1728]
gi|13627133|sp|Q9HKM5|HEM3_THEAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|10639740|emb|CAC11712.1| porphobilinogen deaminase related protein [Thermoplasma
acidophilum]
Length = 295
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RIGTR S LA+ A S++ + + I+ ++GD L IG G+F
Sbjct: 3 TIRIGTRPSRLAVRQAEIVASAIRHA----GYEVEIVKYRSEGDSDLKSPLYSIGKTGVF 58
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
E + ++SG+ID AVHSAKD+P ++ + L+ISA +PR D + + L L
Sbjct: 59 VERLNSLILSGDIDAAVHSAKDIPYEIDRRLRISAVMPRGRFEDALV--SENPLSKLPPG 116
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSSLRR+ +L R D+ V + RG ++TR+ K+ + I++A A I RL+
Sbjct: 117 SVIGTSSLRRRYQILYQRKDVKVSNIRGNVDTRIEKMRSEGMAGIVMALAAIDRLELNLR 176
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E F P+P QG I + + KA E++ IN DT+D + ER+ L C
Sbjct: 177 YW-PFDPEKFVPAPNQGIIAV-VSEDGSKASEVLSSINDADTYDDMMAERSITQGLKLGC 234
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
+ + + G + A DG
Sbjct: 235 STPVGILSRHTGKGMRILAQFFAMDGSDM 263
>gi|124805668|ref|XP_001350505.1| porphobilinogen deaminase [Plasmodium falciparum 3D7]
gi|23496628|gb|AAN36185.1| porphobilinogen deaminase [Plasmodium falciparum 3D7]
gi|70780284|gb|AAZ08393.1| porphobilinogen deaminase [Plasmodium falciparum]
Length = 435
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 102/363 (28%), Positives = 164/363 (45%), Gaps = 59/363 (16%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITN-RTLTEIG 59
K IGTR SPLAL + + R +M K N+ + T GD I + +++ G
Sbjct: 59 KDEIIIGTRDSPLALKQSEKVRKKIMSYFKKMNKNINVTFKYIKTTGDNILDSKSVGLYG 118
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
GKG+FT+E++++LI+G +D VHS KD+P L +++S +L R+ I D F+S +S+
Sbjct: 119 GKGIFTKELDEQLINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFLSIKYKSIN 178
Query: 120 DLALH------------------------SVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155
D+ IGTSSLRR++ + +I V + RG I
Sbjct: 179 DMNTVKSVSKTEDIHHINKKDSDHNNDTLCTIGTSSLRRRSQIKNRYKNIYVNNIRGNIN 238
Query: 156 TRLNKLNNNKAHAILLAYAGI--------------------------------KRLKKEK 183
TR+ KL N + A+++A GI K +
Sbjct: 239 TRIEKLYNGEVDALIIAMCGIERLIKKANLKHLLKNKEQKNICQPFLLKCNNKKCIDLCH 298
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
V + LN P+ GQG I + +H N L+K IN++ + ER+FL +DG+
Sbjct: 299 VNIQKLNKNLIYPALGQGIIAVTSHKKNYFISSLLKNINNKKSEMMAQIERSFLYHIDGN 358
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
C I G+ + +Y + I+ G ++V++ + IG +AA ++ I
Sbjct: 359 CMMPIGGYTNMRNEDIYLHVIINDIHGYNKYQVTQKDTLYNYKEIGPNAAIKMKEIIGTE 418
Query: 304 VFN 306
FN
Sbjct: 419 QFN 421
>gi|333024831|ref|ZP_08452895.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
gi|332744683|gb|EGJ75124.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
Length = 308
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 14/311 (4%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LT 56
M + +G+R S LA A E ++P V ++ GD + +T
Sbjct: 1 MVESVVTVGSRGSALARAQVREMVERWER--EVPGARFVRRVITEAGDADRSTPTVAGVT 58
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISHTA 115
G F+ E L+ GE+D VH KD+PT G + PRED+RD
Sbjct: 59 RRAGASAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDAL---CG 115
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+L L + +GT S RR A +L R D+ V+ RG + RL + A++LA AG
Sbjct: 116 ATLAGLPTGARVGTGSTRRVAQMLALRPDLEVVPVRGNVPARLAR--TRTLDAVVLAAAG 173
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ RL I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER
Sbjct: 174 LHRLGLADEITEYLDPEAYPPAPGQGALAIQVR-EDSEAARLLAASGDAATDAEVRAERV 232
Query: 236 FLAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294
LAEL G C + + + + L + V DG + G + + A+
Sbjct: 233 LLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPAEEPEKLALTVAE 292
Query: 295 YIRFISNKNVF 305
+ +
Sbjct: 293 RLLAQGAARIL 303
>gi|297567358|ref|YP_003686330.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
gi|296851807|gb|ADH64822.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946]
Length = 304
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 14/270 (5%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LA A + L D ++ + T+GDR +++ G
Sbjct: 1 MSR--VRIATRGSRLARWQAEWVAAQLQDQ----GIASTLVIVETQGDRER-VAFSQMQG 53
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G FT+ ++ + G D AVHS KD+P+ GL ++A RED R+ + +
Sbjct: 54 QGFFTKAVQDAVREGRADLAVHSLKDLPSAPTPGLVLAAIPIREDPREALLVLPSAWDAQ 113
Query: 121 LA-----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
+ +G+S++RR+A L + R D+ +++ RG + TR+ KL + AILLA+AG
Sbjct: 114 APALPLAPGARVGSSAVRRQAQLAQLRPDLKLLELRGNVPTRVEKLQSGGYEAILLAWAG 173
Query: 176 IKRLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
+KRL + + +L +F P+PGQGA+ +E + + + +++ ++ +V E
Sbjct: 174 LKRLGLDLGGLAVRLLEPREFVPAPGQGALALECREEDTQLRGVLQGLDDPTARLTVGIE 233
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263
R +A L G C+ A+ A
Sbjct: 234 RGLMARLQGGCQLALGASAQRVQGGWQLLA 263
>gi|300933794|ref|ZP_07149050.1| hypothetical protein CresD4_06949 [Corynebacterium resistens DSM
45100]
Length = 355
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 85/332 (25%), Positives = 141/332 (42%), Gaps = 36/332 (10%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIG 59
++ IGTR S LA + ++ + + + + T GD + +IG
Sbjct: 26 SQRTLLIGTRRSQLATTQSGHVQAGITEQGWAS----ELHIVQTPGDASQASQIPVAQIG 81
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
G+FTE + L + E D AVHS KD+PT K +I R D R+V +S + LK
Sbjct: 82 -VGVFTETLRNALAAKECDVAVHSFKDLPTAPDKRFRII-VPERVDPREVLVSVDNRLLK 139
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
DL + +GTS+ RR + L R D+ ++ RG I++R+ ++ A++LA AG++R+
Sbjct: 140 DLPEGAKVGTSAPRRVSQLRAVRPDLEILPLRGNIDSRMGRV-GTDLDAVILARAGLERV 198
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ E L+ P+P QGA+ +E ++ +A + V + H + ERA LA
Sbjct: 199 GQLDRAAESLDPHVIMPAPAQGALAVEVRADDDEAWQAVLPLEHLPSHLMAAAERAVLAT 258
Query: 240 LDGSCKSAIAGFAYCKGS---TLYFYGIVLASDGKIFH--EVSRNGNRC--DAI------ 286
L+ C + +A + GS L V DG V R +A
Sbjct: 259 LEAGCSAPVAAHSEWTGSDHTELTISAGVFGMDGTKQLVDTVKVTFPREFVNAERPQETK 318
Query: 287 --------------NIGRDAAQYIRFISNKNV 304
+ G + ++
Sbjct: 319 PDLDKREQLLARAFDAGSRLGTILLEAGASDL 350
>gi|281348599|gb|EFB24183.1| hypothetical protein PANDA_019874 [Ailuropoda melanoleuca]
Length = 298
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 132/289 (45%), Gaps = 39/289 (13%)
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115
+IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 1 QIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKF 60
Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLA 172
++L+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA
Sbjct: 61 VGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILA 120
Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232
AG++R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T
Sbjct: 121 AAGLQRMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIA 180
Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST------LYFYGIVLASDGKIFHEVSR-------- 278
ERAFL L+G C +A K LY G V + DG + +
Sbjct: 181 ERAFLRHLEGGCSVPVAVHTAMKDGQASRGRWLYLTGGVWSLDGSDSMQETMQATIRVTA 240
Query: 279 ---NGNRCD------------------AINIGRDAAQYIRFISNKNVFN 306
+G D A N+G A + KN+ +
Sbjct: 241 QLEDGPEDDPQLVGITARNIPREAQLAAENLGISLASLLLNKGAKNILD 289
>gi|301630715|ref|XP_002944462.1| PREDICTED: porphobilinogen deaminase-like, partial [Xenopus
(Silurana) tropicalis]
Length = 291
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 87/281 (30%), Positives = 120/281 (42%), Gaps = 33/281 (11%)
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +
Sbjct: 1 IGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRY 60
Query: 118 LKDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAY 173
L SVIGTSSLRR A L + + D RG + TR+ KL+ AI+LA
Sbjct: 61 GNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAA 120
Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233
AG++R+ E I +IL ++ + GQGA+ IE + +V + +T E
Sbjct: 121 AGLRRMGWENRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAE 180
Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNR 282
RAF+ L+G C +A K S LY G V + DG + G
Sbjct: 181 RAFMKRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPN 240
Query: 283 CD------------------AINIGRDAAQYIRFISNKNVF 305
D A +G A + K +
Sbjct: 241 DDVQHVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 281
>gi|295836866|ref|ZP_06823799.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
gi|197699525|gb|EDY46458.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74]
Length = 335
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 129/308 (41%), Gaps = 14/308 (4%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIG 59
+ +G+R S LA A E ++P V ++ GD + +T
Sbjct: 31 RTVTVGSRGSALARAQVREMVERWER--EVPGVRFVRRVITEAGDADRSTPTVAGVTRRA 88
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISHTAQSL 118
G F+ E L+ E+D VH KD+PT G + PRED RD +L
Sbjct: 89 GVSAFSSRQEAALVRREVDVVVHCLKDLPTTPAPGTALLRTPGPREDARDAL---CGATL 145
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + +GT S RR A LL R D+ VI RG + RL +L A++LA AG+ R
Sbjct: 146 AGLPRGARVGTGSTRRVAQLLALRPDLEVIPVRGNVPARLARLRT--LDAVVLAAAGLHR 203
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
L + I E L+ E +PP+PGQGA+ I+ A L+ T V ER LA
Sbjct: 204 LGLTEEITEYLDPEAYPPAPGQGALAIQVR-EGSGAARLLAASGDPATDTEVRAERVLLA 262
Query: 239 ELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
EL G C + + + TL + V A DG + G + + A+ +
Sbjct: 263 ELHGGCSVPLGTWTSRPSPGTLRLHAAVTAPDGGRQITATAQGPASEPDKLALTVAERLL 322
Query: 298 FISNKNVF 305
+
Sbjct: 323 AGGAARIL 330
>gi|116754430|ref|YP_843548.1| porphobilinogen deaminase [Methanosaeta thermophila PT]
gi|116665881|gb|ABK14908.1| hydroxymethylbilane synthase [Methanosaeta thermophila PT]
Length = 270
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 85/263 (32%), Positives = 139/263 (52%), Gaps = 3/263 (1%)
Query: 42 PLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101
+ T GD +R L I G+GLF EI+++++SGEID AVHS KD+P+K + L+I+A +
Sbjct: 2 TVRTSGDLFLDRPLHMISGQGLFVREIDERMLSGEIDLAVHSMKDLPSKRPERLRIAAIM 61
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
R+ D+ ++ L DL +VIGTSS+RR A L R R D+ V RG ++TRL KL
Sbjct: 62 KRDSPCDILLTKDGSGLDDLKSGAVIGTSSMRRAAQLRRARPDLVVRSLRGNLQTRLRKL 121
Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
+ + I++A AG++R+ + ++L+ F PSP QG I + V + L +I
Sbjct: 122 HAGEYDGIVIAEAGVQRMGY-HLGYKVLDPGFFVPSPNQGTIAV-VSVAGTEGDALASLI 179
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281
+H + + ER + + G C +A FA G ++ +L+ DG+ F +
Sbjct: 180 DHRPSREETMVERRIMEVVGGGCLVPMAVFARHLGDRIHVTAEILSKDGERFVRLEDTVP 239
Query: 282 RCDAINIGRDAAQYIRFISNKNV 304
R D + + + + +
Sbjct: 240 R-DGLESAERIGRRLLEMGGDEL 261
>gi|297622476|ref|YP_003703910.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093]
gi|297163656|gb|ADI13367.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093]
Length = 320
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 13/267 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKGL 63
RI TR S LAL A R L + ++PL T+GDR + G+G
Sbjct: 20 VRIATRKSALALWQATWVRERLAAL----GVATELVPLDTQGDRTQEAGTPFRLMPGQGF 75
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA- 122
FT+ ++ ++ G D AVHS KD+P+ L GL+++A RED RDV + + + A
Sbjct: 76 FTKAVQDAVLEGRADVAVHSHKDLPSARLAGLELAAVTEREDPRDVLLVRPGAARPESAA 135
Query: 123 ----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGI 176
+V+GTS+ RR+A L R D+ V + RG + TR+ L + + A
Sbjct: 136 LPLVEGAVVGTSAARRQAQLRHLRPDVRVAELRGNVPTRVRALREGRYDAVVLAAAGLAR 195
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
L + L+ + F P+P QGA+ +E + + L+ ++ D + +V ER
Sbjct: 196 LALDLSDLTVYPLDPKRFVPAPAQGALALEIRRGDAELAALLTELHAPDAYQTVAAERGL 255
Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYG 263
+ L G C+ A+ +A +G L
Sbjct: 256 MGMLQGGCQLALGAYAALQGGELELTA 282
>gi|315654433|ref|ZP_07907341.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333]
gi|315491468|gb|EFU81085.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333]
Length = 373
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 91/347 (26%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P IGTR S LAL S L ++ + +T+GD +L +GG
Sbjct: 7 TERPLVIGTRASALALTQTRAVASDLEQR----GLHVQVQTFTTEGDINR-ASLASLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL
Sbjct: 62 GVFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNK 165
S +GT S RR + R DI ++D RG + TR+ ++
Sbjct: 122 PAGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEHAGLPSGKAAED 181
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------K 219
++LA AG++RL + I + L P+ GQGA+ +ET + E K
Sbjct: 182 LDGVVLARAGLRRLGMDDAITDSLE-GTVIPAGGQGALALETRSELLDSDEGRNFAQILK 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAG--------FAYCKGSTLYFY-------GI 264
++ E T V+ ERA L L+ C + + L G
Sbjct: 241 FVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGIVTWDKHTEAPSGRLELTARVIGNQGE 300
Query: 265 VLASDGKIFH-----EVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
VL +G+ R+ A +G D A + + +
Sbjct: 301 VLEVNGETTVLLGAEAAQRDFALAAAEQLGVDLAGELLEAGAATIAD 347
>gi|298345857|ref|YP_003718544.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063]
gi|304390438|ref|ZP_07372391.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315657641|ref|ZP_07910523.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298235918|gb|ADI67050.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063]
gi|304326194|gb|EFL93439.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315492113|gb|EFU81722.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 373
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 91/347 (26%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P IGTR S LAL S L ++ + +T+GD +L +GG
Sbjct: 7 TERPLVIGTRASALALTQTRAVASDLEQR----GLHVQVQTFTTEGDINR-ASLASLGGV 61
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL
Sbjct: 62 GVFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADL 121
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNK 165
S +GT S RR + R DI ++D RG + TR+ ++
Sbjct: 122 PAGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEQAGLPSGKAAED 181
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------K 219
++LA AG++RL + I + L P+ GQGA+ +ET + E K
Sbjct: 182 LDGVVLARAGLRRLGMDDAITDSLE-GTVIPAGGQGALALETRSELLDSDEGRNFAQILK 240
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAG--------FAYCKGSTLYFY-------GI 264
++ E T V+ ERA L L+ C + + L G
Sbjct: 241 FVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGVVTWDKHTEAPSGRLELTARVIGNQGE 300
Query: 265 VLASDGKIFH-----EVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
VL +G+ R+ A +G D A + + +
Sbjct: 301 VLEVNGETTVLLGAEAAQRDFALAAAEQLGVDLAGELLEAGAATIAD 347
>gi|327329283|gb|EGE71043.1| hydroxymethylbilane synthase [Propionibacterium acnes HL103PA1]
Length = 315
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 32/312 (10%)
Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81
L ++ + ++T GD I+ +L +GG G+F I L+ GE D AV
Sbjct: 1 MVARLLRS----EGLDVDLTTITTHGD-ISTASLAAMGGIGVFASAIRATLLKGEADIAV 55
Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141
HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL
Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115
Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191
R D++++D RG ++TRL ++ A++LA +G+ RL + E L+
Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDP 175
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248
P+P QGA+ +E + + +L I+ T + ERA L+ L+ C + I
Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235
Query: 249 AGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294
A K L +V DG + A +G AA+
Sbjct: 236 GALAQLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEVDSALAAAHTLGVTAAE 295
Query: 295 YIRFISNKNVFN 306
+ +V +
Sbjct: 296 ELLDDGAADVAD 307
>gi|333025240|ref|ZP_08453304.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
gi|332745092|gb|EGJ75533.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071]
Length = 307
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 21/281 (7%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+A + ++ + ++ ++ ++T GD L IGG G+F + L+ G+
Sbjct: 1 MAQSGLVADAVREAT---GRSVELVEITTYGDTSR-EHLARIGGTGVFVTALRDALLRGD 56
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136
+D AVHS KD+PT +GL ++A RED RD I+ +L+ L + IGT S RR A
Sbjct: 57 VDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLERLPRGARIGTGSPRRMA 116
Query: 137 LLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
L DI + RG ++TR+N + + + A++LA AG+ RL + + L +
Sbjct: 117 QLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAGLNRLGRGGEVTAYLASD 176
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+PGQGA+ +E E + ++ T +V ERA LA L+ C + + A
Sbjct: 177 TVLPAPGQGALAVECPPGP--LAEALARLDDPRTRAAVTAERALLAALEAGCSAPVGALA 234
Query: 253 YCKG-----------STLYFYGIVLASDGKIFHEVSRNGNR 282
G + + G+V ++DG +++ G+
Sbjct: 235 DFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGHV 275
>gi|318057211|ref|ZP_07975934.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG]
gi|318079308|ref|ZP_07986640.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF]
Length = 314
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 85/306 (27%), Positives = 128/306 (41%), Gaps = 14/306 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIGGK 61
+G+R S LA A E ++P V ++ GD + +T G
Sbjct: 12 VTVGSRGSALARAQVREMVERWER--EVPGTRFVRRVITEAGDADRSTPTVAGVTRRAGA 69
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISHTAQSLKD 120
F+ E L+ GE+D VH KD+P G + PRED+RD +L
Sbjct: 70 SAFSSRQEAALVRGEVDVVVHCLKDLPNAPAPGTVLLRTPGPREDVRDAL---CGATLAG 126
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A LL R D+ V+ RG + RL + A++LA AG+ RL
Sbjct: 127 LPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLAR--TRTLDAVVLAAAGLHRLG 184
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER LAEL
Sbjct: 185 LADEITEYLDPEVYPPAPGQGALAIQVR-EDSEAARLLAASGDAATDAEVRAERVLLAEL 243
Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C + + + + L + V DG + G + + A+ +
Sbjct: 244 HGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPTAEPEKLALTVAERLLAQ 303
Query: 300 SNKNVF 305
+
Sbjct: 304 GAARIL 309
>gi|332796306|ref|YP_004457806.1| porphobilinogen deaminase [Acidianus hospitalis W1]
gi|332694041|gb|AEE93508.1| porphobilinogen deaminase [Acidianus hospitalis W1]
Length = 292
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 11/292 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S L+ L + + I + TK D N L ++G KG+F
Sbjct: 2 IRIAARNSQLSQVQVKVVSDYLNKL----GYETEFIGVKTKADLFVNEPLYKLG-KGVFE 56
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ + +I G D AVHS KD+ + L + L I A + R+ DV +S + + DL S
Sbjct: 57 KEVNEYVIRGLADLAVHSMKDLTSNLSEELDILATVKRDSPYDVLVSK--KDVFDLDSGS 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RRK + R DI V D RG I+TR+ K + + I++A A I RL +
Sbjct: 115 VIGTSSIRRKNFMTFLRPDILVKDLRGNIDTRIKKYTSGEYVGIIIAEASILRLN-LNIN 173
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
LN DF P QG I + N+ + ++L+ ++ ++T++ ER+ + + G C
Sbjct: 174 YFKLNPIDFTPEANQGIIAVVGKKNDERTRKLLSELHDQETFNEAIAERSTMEIVGGGCH 233
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
S + GI S+GK V+ + + ++G + + +
Sbjct: 234 SPFGVYFEQIDD--RLLGIASFSNGKKKITVTIE-RKGNPKDVGHELGKLLL 282
>gi|313814512|gb|EFS52226.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA1]
gi|314922347|gb|EFS86178.1| porphobilinogen deaminase [Propionibacterium acnes HL001PA1]
gi|314965338|gb|EFT09437.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA2]
gi|314982570|gb|EFT26662.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA3]
gi|315091095|gb|EFT63071.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA4]
gi|315094182|gb|EFT66158.1| porphobilinogen deaminase [Propionibacterium acnes HL060PA1]
gi|315104838|gb|EFT76814.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA2]
Length = 315
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 132/312 (42%), Gaps = 32/312 (10%)
Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81
L ++ + ++T GD + +L +GG G+F I L+ GE D AV
Sbjct: 1 MVARLLRS----EGLDVDLTTITTHGDT-STASLAAMGGIGVFASAIRATLLKGEADIAV 55
Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141
HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL
Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115
Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191
R D++++D RG ++TRL ++ A++LA +G+ RL + E L+
Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDP 175
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248
P+P QGA+ +E + + +L I+ T + ERA L+ L+ C + I
Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235
Query: 249 AGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294
A K L +V DG + A +G AA+
Sbjct: 236 GALAQLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEVDSALAAAHTLGVTAAE 295
Query: 295 YIRFISNKNVFN 306
+ +V +
Sbjct: 296 ELLDDGAADVAD 307
>gi|301167270|emb|CBW26852.1| putative porphobilinogen deaminase [Bacteriovorax marinus SJ]
Length = 512
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 40/317 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M KK ++IGTR S LA+ + + L + + + T+GD IT++ L ++ G
Sbjct: 1 MSKKIYKIGTRGSLLAVTQCTQVKEELEKLT---GDQFELEIIKTQGDLITDKPLWQLDG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV-FISHTAQSLK 119
K FT+E+++ L++ ++D VHS KD+ ++ +G++++A R D+ FI +
Sbjct: 58 KDFFTKELDEALLTNKVDMVVHSYKDLGSERPQGIKLAAITKRHFAHDILFIKNETIKNL 117
Query: 120 DLALHSVIGTSSLRR----KALLLRWRSDISV----IDFRGKIETRLNKLNNNKAHAILL 171
++GTSS RR +A L + ++ RG + TR+ KL + + AI+L
Sbjct: 118 SNKKEFIVGTSSPRRIVNIEAQLSEYLPTDNIKVETKMLRGNVNTRIGKLVDGQYDAIVL 177
Query: 172 AYAGIKRLKKEKV------------IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
A GI+RL + IL FP + QGA+ IE + N + + ++
Sbjct: 178 ALPGIERLAHSEKSLEELKVLLKDLNYMILPQSTFPSAASQGALAIECNEENTELYQKLQ 237
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-------- 271
+I + T V+ ER G C A+ G + + GK
Sbjct: 238 LIEDKVTVSEVSRERQAFNGYGGGCHLAVGVNVKRVGDN-----YIHSHRGKNEDKSISE 292
Query: 272 ---IFHEVSRNGNRCDA 285
+ G++ +A
Sbjct: 293 LRLESVSETFKGDKTNA 309
>gi|182415288|ref|YP_001820354.1| porphobilinogen deaminase [Opitutus terrae PB90-1]
gi|177842502|gb|ACB76754.1| porphobilinogen deaminase [Opitutus terrae PB90-1]
Length = 284
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 86/263 (32%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K + TR SPLAL + L ++ L T GDR T +L + GGKG
Sbjct: 1 MKKLILATRKSPLALRQTEMVAAHLEARL---GVQTELLKLVTTGDRQTEWSLEQKGGKG 57
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
LFT E+E L GE D AVHS KD+P + L ++ YLPR D RDV + +A
Sbjct: 58 LFTSELENALRRGEADLAVHSTKDLPGDMAAELAVAGYLPRADARDVLVLRAG-----VA 112
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLK- 180
+ T S RR+ + + ++ + RG ++TRL K+ A +LA AG+ RL
Sbjct: 113 APKSLATGSPRRRLQIAKLYPGVTFTEIRGNVDTRLKKIGELGVADGTVLASAGLNRLGI 172
Query: 181 --KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
V L D P+ GQGAI ++ + + T +V+ ERAF A
Sbjct: 173 GNWPGVEFHALGFNDMVPAVGQGAIAVQCRAADA---ARFAPVFDAATKRAVDVERAFQA 229
Query: 239 ELDGSCKSAIAGFAYCKGSTLYF 261
L C++A G TL+F
Sbjct: 230 ALGVGCQTAFGAH--VAGDTLHF 250
>gi|297170423|gb|ADI21455.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0070_10G19]
Length = 302
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 83/274 (30%), Positives = 137/274 (50%), Gaps = 10/274 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R SPLA+ A + ++ + +IP+ + GD T++ L++IGGKGLF
Sbjct: 3 IRIACRKSPLAVLQANKFIEAIQKKYG-KEIKCRLIPMHSAGDL-TDKDLSQIGGKGLFI 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLAL 123
E+E L S D AVHS KD+P KL G +I + L R + DV I + ++DL
Sbjct: 61 SELESALASDNADVAVHSLKDVPAKLNDGFEIISCLERGNPNDVIILKQNGPSVIQDLNN 120
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
HS I TSS RRKA + + RG I TR++K + +L+A ++RL ++
Sbjct: 121 HSKIATSSPRRKAQWKIYNPTFEFVPIRGNISTRISKFLESDLDGLLMAATALERLNIQE 180
Query: 184 VIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ N +D PS QG I +E + + + +++++ +NH++++++ ER + LD
Sbjct: 181 HHYDEFNYQDVVPSVCQGIIGMEIYLGTISQEKRQIIQSVNHQNSFNAALMEREIIKSLD 240
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
C S I +Y +G ++
Sbjct: 241 ADCMSPIGVICR--DKMIYLDA--FNKEGTEIYQ 270
>gi|70606576|ref|YP_255446.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639]
gi|68567224|gb|AAY80153.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639]
Length = 296
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 14/295 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S L+ L ++ +I + TK D ++ L +G KG+F
Sbjct: 3 IRIAARGSLLSRIQVKMVEDKLRNL----GIETELIVVKTKADLFQDKPLNSLG-KGVFE 57
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+E+ + +I+GE D AVHS KDM + + + L + LPR+ D + + L ++
Sbjct: 58 KEVNEAVINGEADIAVHSMKDMLSDMDEKLVLYGVLPRDSPYDSLV--AEKDLFNIESGK 115
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
VIGTSS+RR++++ +R D+ V D RG I+TRL K + + I++A A IKRL V
Sbjct: 116 VIGTSSIRRRSMISFYRRDLVVKDLRGNIDTRLKKYQSKEYDGIVIAEAAIKRLN-SVVR 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ + P QG I I N K + L + +N E T ER + L G C
Sbjct: 175 YYKIDPKIITPEANQGIIAI-VGRVNEKLKTLFRELNDERTLKEALVERTVVKLLGGGCH 233
Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
S I A + V++ KI E G D +G + +
Sbjct: 234 SPIGILASMISENEFNVISTYVISDKKKITIEGIYRG---DPTTVGEKVVKDMVK 285
>gi|111075012|gb|ABH04865.1| porphobilinogen deaminase [Heliobacillus mobilis]
Length = 187
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M ++P IGTR S LAL + L ++ P + + TKGD+I + L +I
Sbjct: 1 MSVLQRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKI 58
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G KGLFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L
Sbjct: 59 GDKGLFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISR-HGGL 117
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178
L + +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ R
Sbjct: 118 DALPQGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIR 177
Query: 179 LKKEKVIKEI 188
L + I +
Sbjct: 178 LGWAEKISQY 187
>gi|229822489|ref|YP_002884015.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333]
gi|229568402|gb|ACQ82253.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333]
Length = 334
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 23/294 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI---PPHNIVIIPLSTKGDRITNRTLTEI 58
+ R+GTR S LA + ++ + ++ ++T GD + +L +
Sbjct: 18 STRTLRVGTRASALATTQSEWAGEAIAARVAAATGSDVEVELVRVTTTGD-VLTGSLASM 76
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GG G+F + + L+ G D AVHS KD+PT GL + A RED RDV + L
Sbjct: 77 GGTGVFVTALREALLDGRCDVAVHSLKDLPTAAAPGLVLGAVPQREDPRDVLCARAGAGL 136
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176
DL +GT S RR A L R R D+ ++D RG ++TRL++++ K A++LA AG+
Sbjct: 137 ADLPAGGRVGTGSPRRAAQLRRARPDLEIVDIRGNVDTRLSRISPGKGDLDAVVLARAGL 196
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHV-NNPKAQELVKVINHEDTWDSVNCERA 235
RL + + E L+ P+PGQGA+ +E ++ + T +V ERA
Sbjct: 197 ARLGRLDAVTEALDAGVMVPAPGQGALAVEAVDAAPDWLLAGLRAFDDAPTRLAVTAERA 256
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
LA L+ C + + A GS L V DA ++G
Sbjct: 257 MLARLEVGCSAPVGALATLAGSQLLLRTSVG----------------EDAEDLG 294
>gi|288920172|ref|ZP_06414488.1| porphobilinogen deaminase [Frankia sp. EUN1f]
gi|288348422|gb|EFC82683.1| porphobilinogen deaminase [Frankia sp. EUN1f]
Length = 395
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/206 (37%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
++P R+GTR S LALA + +L + ++P+ T GDR +++IGG
Sbjct: 20 TRRPLRLGTRRSALALAQSGHVAEALRARL---GCQVELVPIVTDGDRSQG-AISQIGGT 75
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+F + + L+SGEID AVHS KD+PT GL ++A PR D RDV +S + + L L
Sbjct: 76 GVFVSALREALLSGEIDLAVHSLKDLPTATPDGLVLAAVPPRVDTRDVLVSPSGRGLVKL 135
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
++ IGT + RR A L V+ RG ++TR+ K + + A++LA+AG+ RL +
Sbjct: 136 GPNARIGTGAPRRAAQLRAMGLGFDVVPIRGNVDTRIKKAIDGEVDAVILAHAGLARLDR 195
Query: 182 EKVIKEILNIEDFPPSPGQGAICIET 207
+ EI+ E P+PGQGA+ IE
Sbjct: 196 LDAVTEIIPSEVILPAPGQGALAIEC 221
Score = 69.0 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 16/99 (16%)
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC------------KG----STLYFYGIV 265
+ + +V ERAFLA ++ C + + G L +V
Sbjct: 293 DDAPSSVAVRAERAFLAGIEAGCTAPVGALGRVLPSTGSSPTTGGDGAPAVGDLRLRAVV 352
Query: 266 LASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
A DG G+ D +G+ A + + +
Sbjct: 353 AAPDGSRVLRCELTGSAVDPEALGQRLADEMLSAGAQTL 391
>gi|330835713|ref|YP_004410441.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4]
gi|329567852|gb|AEB95957.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4]
Length = 289
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 131/295 (44%), Gaps = 15/295 (5%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
RI R S L++ S L + I + T+ D + L EIG KG+F
Sbjct: 2 KVRIAARGSRLSVKQVETVSSYLNSR----GYETEFIEVKTRADLFSGTPLHEIG-KGVF 56
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ + ++ G+ D AVHS KD+ L +GL+I A RE+ DV + + L+++
Sbjct: 57 DKEVNEAVLIGKADLAVHSMKDLSA-LPEGLKILATPRRENPSDVLV--SDYELQEMPAG 113
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
S IGT SLRR L R D+ VI+ RG ++TR+ K + I+LA AG+ RL
Sbjct: 114 SKIGTGSLRRTNFLKVLRPDLQVINLRGNVDTRIRKYLTREYDGIILAEAGLVRLGINVK 173
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
E L++ DF P QG I I P EL+K +N E T ER + + G C
Sbjct: 174 RHE-LDVHDFTPEANQGIIAIV---GRPHLTELLKELNDEATMTVARAEREVVKVIGGGC 229
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
S + + GI SDG S + G+ + +
Sbjct: 230 HSPLGVLFQMEDD--RLTGIASYSDGIRRVSASVSV-MDSPEAAGQALGRALLKE 281
>gi|315110126|gb|EFT82102.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA2]
Length = 315
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 32/312 (10%)
Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81
L ++ + ++T GD + +L +GG G+F I L+ GE D AV
Sbjct: 1 MVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGEADIAV 55
Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141
HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL
Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115
Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191
R D++++D RG ++TRL ++ A++LA +G+ RL + E L+
Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDP 175
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248
P+P QGA+ +E + + + I+ T + ERA L+ L+ C + I
Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKFAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235
Query: 249 AGFAYCKG------STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294
A K L +V A DG A +G AA+
Sbjct: 236 GALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAE 295
Query: 295 YIRFISNKNVFN 306
+ +V +
Sbjct: 296 ELLDDGAADVAD 307
>gi|254445937|ref|ZP_05059413.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235]
gi|198260245|gb|EDY84553.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235]
Length = 291
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 90/296 (30%), Positives = 137/296 (46%), Gaps = 18/296 (6%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ + I TR SPLA+A + +P I + T GD+ +L + GGKGL
Sbjct: 6 REYVIATRKSPLAMAQTHLAKELFQR--GMPDAVFRIEKMVTTGDKRQEWSLEKQGGKGL 63
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+E+E L+ G D AVHSAKD+P+++ KGL ++ +LPR+ DV I +
Sbjct: 64 FTKELEDALLEGRADFAVHSAKDLPSEMPKGLALAGFLPRQTCEDVLILRDG-----VES 118
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180
+I T S RR+ L + RG ++TRL K+ A A +LA AG+ RL
Sbjct: 119 PKLIATGSPRRRIQLRYLFPKAEFTEIRGNVDTRLTKIARGDADATVLASAGLNRLGIES 178
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
E V L +++ P+ GQ A+ I+ + + + E+T +VN ER+FL EL
Sbjct: 179 WEGVTFRKLTLDECVPAVGQAAVAIQC---REEDVDTFRAHLDEETAIAVNLERSFLEEL 235
Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
G C+ A A G L GK ++ + I + +
Sbjct: 236 GGGCQVAFAV--NYVGGRLRI---YHKQCGKEVRDLPQEYVATHYEQIAAKLIEQL 286
>gi|314964545|gb|EFT08645.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA1]
Length = 315
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 132/312 (42%), Gaps = 32/312 (10%)
Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81
L ++ + ++T GD + +L +GG G+F I L+ GE D AV
Sbjct: 1 MVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGETDIAV 55
Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141
HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL
Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115
Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191
R D++++D RG ++TRL ++ A++LA +G+ RL + E L+
Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDP 175
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248
P+P QGA+ +E + + +L I+ T + ERA L+ L+ C + I
Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235
Query: 249 AGFAYCKG------STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294
A K L +V A DG A +G AA+
Sbjct: 236 GALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAE 295
Query: 295 YIRFISNKNVFN 306
+ +V +
Sbjct: 296 ELLDDGAADVAD 307
>gi|313765242|gb|EFS36606.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA1]
gi|313793133|gb|EFS41200.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA1]
gi|313821951|gb|EFS59665.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA1]
gi|313834370|gb|EFS72084.1| porphobilinogen deaminase [Propionibacterium acnes HL056PA1]
gi|314926611|gb|EFS90442.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA3]
gi|314931036|gb|EFS94867.1| porphobilinogen deaminase [Propionibacterium acnes HL067PA1]
gi|314969645|gb|EFT13743.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA1]
gi|314974711|gb|EFT18806.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA1]
gi|314980332|gb|EFT24426.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA2]
gi|314985507|gb|EFT29599.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA1]
gi|314987331|gb|EFT31422.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA2]
gi|315082096|gb|EFT54072.1| porphobilinogen deaminase [Propionibacterium acnes HL078PA1]
gi|315097342|gb|EFT69318.1| porphobilinogen deaminase [Propionibacterium acnes HL038PA1]
gi|315099447|gb|EFT71423.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA2]
gi|315106337|gb|EFT78313.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA1]
gi|327445624|gb|EGE92278.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA2]
gi|327447246|gb|EGE93900.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA1]
gi|327457080|gb|EGF03735.1| porphobilinogen deaminase [Propionibacterium acnes HL092PA1]
gi|328758364|gb|EGF71980.1| porphobilinogen deaminase [Propionibacterium acnes HL020PA1]
Length = 315
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 132/312 (42%), Gaps = 32/312 (10%)
Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81
L ++ + ++T GD + +L +GG G+F I L+ GE D AV
Sbjct: 1 MVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGEADIAV 55
Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141
HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL
Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115
Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191
R D++++D RG ++TRL ++ A++LA +G+ RL + E L+
Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDP 175
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248
P+P QGA+ +E + + +L I+ T + ERA L+ L+ C + I
Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235
Query: 249 AGFAYCKG------STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294
A K L +V A DG A +G AA+
Sbjct: 236 GALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAE 295
Query: 295 YIRFISNKNVFN 306
+ +V +
Sbjct: 296 ELLDDGAADVAD 307
>gi|123210216|emb|CAM15096.1| hydroxymethylbilane synthase [Danio rerio]
Length = 247
Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 126/230 (54%), Gaps = 6/230 (2%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K L
Sbjct: 20 RVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSL 77
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L
Sbjct: 78 FTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDS 137
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179
L SVIGTSSLRR A L + + + RG + TRL KL+ + AI+LA AG+KR+
Sbjct: 138 LPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRM 197
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
E I ++L ED + GQGA+ +E + E+V V++H DT
Sbjct: 198 GWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLR 247
>gi|213583404|ref|ZP_03365230.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 206
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 118/202 (58%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ +
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184
Query: 214 AQELVKVINHEDTWDSVNCERA 235
Q L+ +NH T V ERA
Sbjct: 185 TQALLAPLNHSQTALRVTAERA 206
>gi|28572887|ref|NP_789667.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27]
gi|28411020|emb|CAD67405.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27]
Length = 321
Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 44/331 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A + + ++ DV + ++I S + G F
Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSVR------------RRDGSF 50
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ GE D AVHS KD+P +G I+A LPRED DV + +L L
Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E
Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELV----KVINHEDTWDSVNCERAFLAEL 240
I E +I D+P + GQG++ IE + +++ + ER L+ L
Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEV--------------------SR 278
C S IA A +L + V + DGKIF E S
Sbjct: 229 QADCFSPIAVHAVYTANDKSLRLHAKVFSRDGKIFCESIRFARLVKQLTDTNQNHTKNSG 288
Query: 279 NGNRCDAINIGRDAAQ----YIRFISNKNVF 305
+ + +A+ + A+ + + + +
Sbjct: 289 SDDIGNALEVAMTLAKTVVDELLSKNAREIL 319
>gi|300709477|ref|YP_003735291.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3]
gi|299123160|gb|ADJ13499.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3]
Length = 379
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 60/337 (17%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + P R+ TR S LALA A + +L + + ++ + T GDRI + + +
Sbjct: 1 MTTRSDPIRLATRGSDLALAQAESVKRALSGRRR----EVELVTVETTGDRIDDELIHRL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G F +++K+++G+++ A+HS KDMPT+ + + A R D ++ + L
Sbjct: 57 GKTGAFVHSLDEKVLAGDVEGAIHSMKDMPTEESQLVVA-AVPERATAGDRLVTPDGKPL 115
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------- 161
+L + +GT SLRR A LL R D++V RG ++TR+ KL
Sbjct: 116 AELPEGATVGTGSLRRGAQLLAQRPDLTVEPLRGNVDTRVEKLLSKSLNEEYDRRVAADE 175
Query: 162 ----------------------------------NNNKAHAILLAYAGIKRLKKEKV-IK 186
+ AI+LA AG++R ++
Sbjct: 176 QRKANTDDDFEPEFDRRPEEWIEGLSERERQAFERSESFDAIVLAAAGLERSGLDREIPT 235
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
L E F P+ GQGA+ + T + A+E+ + ++H + ER LA L G C +
Sbjct: 236 SDLPTESFVPAAGQGALAV-TMADGDLAREVNEALDHPRSRVETTVERTVLATLGGGCVA 294
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
I A +G + VLA G+ V+R+
Sbjct: 295 PIGIHAVIQGEHVRTRVQVLARGGEPTISVTRDLPVK 331
>gi|294054671|ref|YP_003548329.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221]
gi|293614004|gb|ADE54159.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221]
Length = 284
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 91/255 (35%), Positives = 128/255 (50%), Gaps = 17/255 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M I TR SPLAL R+ L + K+P + + L+T+ D + +L + GG
Sbjct: 1 MS---ILIATRKSPLALKQTEMVRAWLAE--KLPNDHYEELQLTTQVDERLSWSLEKRGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
GLFT+E+E+ L++ + AVHSAKDMPT L I+ YLPR DV + + +
Sbjct: 56 IGLFTKELEEALLANKATLAVHSAKDMPTTFQDDLCIAGYLPRARANDVIVKRS-----E 110
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179
+ I TSS RR+A L +D RG + TRL K+ +A A LLA AG+ RL
Sbjct: 111 IESPKRIATSSPRRRAQLALLNNDAEWTTLRGNVGTRLRKIAEAQEADATLLAAAGLNRL 170
Query: 180 K---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
+ + L IE P+PGQ AI I+ K E + + EDT +V ER F
Sbjct: 171 DIQSYDGLDFIELPIEQMVPAPGQAAIAIQC---REKDLEKYQDLFCEDTKLAVTLEREF 227
Query: 237 LAELDGSCKSAIAGF 251
L L G C++ +
Sbjct: 228 LHRLGGGCQTPVGAH 242
>gi|292654255|ref|YP_003534152.1| porphobilinogen deaminase [Haloferax volcanii DS2]
gi|291372938|gb|ADE05165.1| porphobilinogen deaminase [Haloferax volcanii DS2]
Length = 363
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 93/361 (25%), Positives = 150/361 (41%), Gaps = 61/361 (16%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+ TR S LA A A + +L ++ ++ + T GDRI + + +G
Sbjct: 1 MTT-TLRLATRGSALARAQAASVQGALAGRR----LDVELVEVETTGDRIQDELIHRLGK 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F ++++++ GE+D AVHS KDMPT+ L ++ R DV ++ + D
Sbjct: 56 TGAFVRALDERVLDGEVDAAVHSMKDMPTEKPADLVVAGVPERAPAGDVLVTAEGHDIDD 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------------- 161
L +V+GTSSLRR+A LL +R D+ V RG ++TR+ KL
Sbjct: 116 LPEGAVVGTSSLRRQAQLLNYRDDLEVEPLRGNVDTRIEKLLATHLQREHEARVENDKER 175
Query: 162 ---------NNNKAHAILLAYAGIKRLKK---------------------------EKVI 185
+ + G+ L++ EKV
Sbjct: 176 QGKKGKTDHDEAFDETADEWFEGLTELERQALGRQVETEYDAIVLAEAGLKRSGLTEKVN 235
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
E L F P+PGQGAI + + + + ++H T ER LAEL G C
Sbjct: 236 YERLPRTTFVPAPGQGAIAVTAADSV-VIELIRDKLDHPRTRVETTVERTILAELGGGCI 294
Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ + A +G ++ VLA+DG + SR+ + N R+ A + +
Sbjct: 295 APVGVHALLQGEHVHVDVQVLATDGSESIKTSRDLPVGNHANAAREFAAALCDRGAGQLV 354
Query: 306 N 306
+
Sbjct: 355 D 355
>gi|307699958|ref|ZP_07637009.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16]
gi|307614996|gb|EFN94214.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16]
Length = 360
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/345 (27%), Positives = 143/345 (41%), Gaps = 51/345 (14%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL + L + I T+GD +L+ +GG G
Sbjct: 8 QRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGVG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 63 VFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNKA 166
+ +GT S RR L R D+S++D RG + TR+ ++
Sbjct: 123 AAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKEDL 182
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------KV 220
A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++
Sbjct: 183 DAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLRI 241
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDGK 271
++ E T V+ ERA L L+ C + + L V+ +G
Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG- 300
Query: 272 IFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303
EVS G D A +G D A +
Sbjct: 301 ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345
>gi|306817540|ref|ZP_07451283.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239]
gi|304649582|gb|EFM46864.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239]
Length = 360
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/345 (27%), Positives = 143/345 (41%), Gaps = 51/345 (14%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL + L + I T+GD +L+ +GG G
Sbjct: 8 QRPLVIGTRGSKLALTQTQMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGVG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 63 VFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNKA 166
+ +GT S RR L R D+S++D RG + TR+ ++
Sbjct: 123 AAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQDRAKEDL 182
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------KV 220
A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++
Sbjct: 183 DAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLRI 241
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDGK 271
++ E T V+ ERA L L+ C + + L V+ +G
Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG- 300
Query: 272 IFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303
EVS G D A +G D A +
Sbjct: 301 ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345
>gi|269977777|ref|ZP_06184737.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1]
gi|269934081|gb|EEZ90655.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1]
Length = 360
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/345 (27%), Positives = 143/345 (41%), Gaps = 51/345 (14%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL + L + I T+GD +L+ +GG G
Sbjct: 8 QRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGVG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 63 VFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNKA 166
+ +GT S RR L R D+S++D RG + TR+ ++
Sbjct: 123 AAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKEDL 182
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------KV 220
A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++
Sbjct: 183 DAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLRI 241
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDGK 271
++ E T V+ ERA L L+ C + + L V+ +G
Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG- 300
Query: 272 IFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303
EVS G D A +G D A +
Sbjct: 301 ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345
>gi|227876587|ref|ZP_03994697.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243]
gi|227842788|gb|EEJ52987.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243]
Length = 360
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/345 (27%), Positives = 143/345 (41%), Gaps = 51/345 (14%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P IGTR S LAL + L + I T+GD +L+ +GG G
Sbjct: 8 QRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGVG 62
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL
Sbjct: 63 VFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADLP 122
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNKA 166
+ +GT S RR L R D+S++D RG + TR+ ++
Sbjct: 123 AAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKEDL 182
Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------KV 220
A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++
Sbjct: 183 DAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLRI 241
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDGK 271
++ E T V+ ERA L L+ C + + L V+ +G
Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG- 300
Query: 272 IFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303
EVS G D A +G D A +
Sbjct: 301 ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345
>gi|13541465|ref|NP_111153.1| porphobilinogen deaminase [Thermoplasma volcanium GSS1]
gi|25453027|sp|Q97B26|HEM3_THEVO RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|14324849|dbj|BAB59775.1| hydroxymethylbilane synthase [Thermoplasma volcanium GSS1]
Length = 297
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 8/266 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+IGTR S LA+A A SSL + + I+ + GD T + IG G+F
Sbjct: 2 KIKIGTRPSNLAVAQANMVASSLEAI----GIDTEIVKHRSAGDIDTKNPIYSIGKTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+++ ++ GEID AVHSAKD+P+++ L I+A L R D +S L+ L +
Sbjct: 58 VQDLNNMILRGEIDVAVHSAKDIPSEIENRLTIAATLKRGSFNDALVSKY--DLRSLPIS 115
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GTSS+RR L R D+ + RG IETR+ K++ AI++A A I+RL V
Sbjct: 116 AKVGTSSIRRIFQLKYARQDLKFENIRGNIETRIAKMSELGLDAIVMAEAAIQRLG-LNV 174
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
L+ F P+P QG I + + +++++ IN E+T++ + ER+ + +L C
Sbjct: 175 EYSKLDENKFVPAPNQGIIAVVSKKEGT-VRKILEEINDENTFEEMQIERSVVQQLKLGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270
+ + + G + G
Sbjct: 234 STPVGILSRPSGKGHKIIAQFFSMQG 259
>gi|302521530|ref|ZP_07273872.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
gi|302430425|gb|EFL02241.1| porphobilinogen deaminase [Streptomyces sp. SPB78]
Length = 331
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 85/306 (27%), Positives = 127/306 (41%), Gaps = 14/306 (4%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIGGK 61
+G+R S LA A E ++P V ++ GD + +T G
Sbjct: 29 VTVGSRGSALARAQVREMVERWER--EVPGVRFVRRVITEAGDADRSTPTVAGVTRRAGA 86
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISHTAQSLKD 120
F+ E L+ GE+D VH KD+PT G + PRED+RD +L
Sbjct: 87 SAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDAL---CGATLAG 143
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L + +GT S RR A LL R D+ V+ RG + RL + A++LA G+ RL
Sbjct: 144 LPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLAR--TRTLDAVVLAAVGLHRLG 201
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER LAEL
Sbjct: 202 LADEITEYLDPEAYPPAPGQGALAIQVR-EDSEAARLLAASGDAATDAEVRAERVLLAEL 260
Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
G C + + + + L + V DG + G + + A +
Sbjct: 261 HGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPSAEPEKLALTVAASLLAQ 320
Query: 300 SNKNVF 305
+
Sbjct: 321 GAARIL 326
>gi|28493699|ref|NP_787860.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist]
gi|28476741|gb|AAO44829.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist]
Length = 321
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 44/331 (13%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA A + + ++ DV + ++I S + G F
Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSVR------------RRDGSF 50
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+ L+ GE D AVHS KD+P +G I+A LPRED DV + +L L
Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+ +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E
Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELV----KVINHEDTWDSVNCERAFLAEL 240
I E +I D+P + GQG++ IE + +++ + ER L+ L
Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228
Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEV--------------------SR 278
C S IA A +L + V + DGKIF E S
Sbjct: 229 QADCFSPIAVHAVYTANDKSLGLHAKVFSRDGKIFCESIRFARLVKQLTDTNQNHTKNSG 288
Query: 279 NGNRCDAINIGRDAAQ----YIRFISNKNVF 305
+ + +A+ + A+ + + + +
Sbjct: 289 SDDIGNALEVAMTLAKTVVDELLSKNAREIL 319
>gi|256833700|ref|YP_003162427.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603]
gi|256687231|gb|ACV10124.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603]
Length = 344
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 51/349 (14%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+GTR S LA A + T + + + + + T GD + +L +GG
Sbjct: 1 MTS--LRLGTRASALATAQSRATAALIAQAT---GVTVDLTHIRTDGD-VLTGSLATMGG 54
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F I + L++G+ID AVHS KD+PT +G I RE+ +D S +SL
Sbjct: 55 AGVFVTAIRQALLAGDIDIAVHSLKDLPTTPHEGTTII-VPERENPQDALCSRHGESLAH 113
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------NNNKAHAILL 171
L +++GT S RR A LL R D+ ++D RG ++TRL ++ N A++L
Sbjct: 114 LPHGALVGTGSPRRAAQLLVARPDLRIVDIRGNVDTRLARVGLSTADKPHIRNDLDAVVL 173
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTW 227
A AG++RL + VI E+L P+PGQGA+ IE + ++ ++H+ T
Sbjct: 174 AAAGLRRLGRAHVISELLPPTSMLPAPGQGALAIEVRHDMADHHPSILAGIRTLHHQPTA 233
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS------------------- 268
+V ERA L L+ C + + A +TL L
Sbjct: 234 YAVAAERAVLRHLEAGCAAPVGALATMHNTTLTLTATALDPRLTPTAHTPTPSTTTDINA 293
Query: 269 ---------DGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305
D + ++ DA G A +
Sbjct: 294 APTPMTAPADARPPIRLTHTHTVTSENDATEAGITLATTLLTHGAAEFL 342
>gi|148693634|gb|EDL25581.1| mCG10727, isoform CRA_b [Mus musculus]
Length = 208
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFI---- 130
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK 180
++ RG + TRL KL+ + AI+LA AG++R+
Sbjct: 131 ----------------------GKTLETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMG 168
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
+ + +IL+ E+ + GQ A+ +E +
Sbjct: 169 WQNRVGQILHPEECMYAVGQVALAVEVRAKDQD 201
>gi|167535436|ref|XP_001749392.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772258|gb|EDQ85913.1| predicted protein [Monosiga brevicollis MX1]
Length = 643
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 106/212 (50%), Gaps = 8/212 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RIGTR S LA+ L H P ++PLST GD L + G+FT
Sbjct: 417 IRIGTRSSVLAMWQTRWVVERLTRAH--PGVRFSVVPLSTVGDANLTLDLNKFSTTGIFT 474
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---- 121
+ + + L++ E+D VHS KD+P+ + G Q++A PRED RDV + H S
Sbjct: 475 DALVRALLAQEVDILVHSLKDLPSTISPGTQLAAIGPREDPRDVVVFHHRHSEIKDLAQL 534
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179
+V+GTSS RR+A L + RG + TRL KL++ N A+ LA AG+ RL
Sbjct: 535 PAGAVVGTSSTRRRAQLAAAYPQLRFAPVRGNVMTRLRKLDDPANGYDALCLAAAGLIRL 594
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNN 211
E I + L + + GQGA+ I+ +
Sbjct: 595 GLEARIGQFLPLTVSRHAIGQGALGIQVGPAH 626
>gi|164661463|ref|XP_001731854.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966]
gi|159105755|gb|EDP44640.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966]
Length = 530
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 91/391 (23%), Positives = 156/391 (39%), Gaps = 90/391 (23%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK------------IP------------------ 34
+ +R S LA+ A + + L + P
Sbjct: 89 TLVLSSRKSELAVRQATQVQMLLDTRYGRASPVFAPGADQWPSTEVANIRAFLRTFSPDQ 148
Query: 35 ----PHNIVIIPLSTKGDRITNRTLTEIGG--KGLFTEEIEKKLISGEIDCAVHSAKDMP 88
P + + ++T GD+ L IGG + ++T+E+E L++G +D VHS KD+P
Sbjct: 149 KDVRPVDFPVRTMATLGDQNLKSPLYVIGGEGRAIWTKELEVALMAGGVDAIVHSLKDVP 208
Query: 89 TKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145
T + G++++A L RED RD + +SL+++ SVIGTSS+RR +LL R +
Sbjct: 209 TTMPDGVELAAILEREDPRDALVVKENLPYKSLQEMPQGSVIGTSSVRRVSLLRRAYPHL 268
Query: 146 SVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
D RG I TRL KL+ + A++LA AG+KR+ E I ++ + GQG++
Sbjct: 269 MFSDVRGNINTRLAKLDAADGPYTALVLAAAGLKRMDLEHRITAYVSEPVMLHAVGQGSL 328
Query: 204 CIETHVNNPKAQELVKVIN-------HEDTWDSVNCERAFLAELDGSCKSAIAG------ 250
IE ++ E + I + ERA + ++G C +
Sbjct: 329 AIEVRTPRGESAERDERIRRMIRSISNWRATWRCVAERALMHRMEGGCSIPLGVSTRFED 388
Query: 251 FAYCK--------------------------------GSTLYFYGIVLASDGKIFHEVSR 278
A + GS L ++++ DG + S
Sbjct: 389 HADIEGLLNERNETPSEMASAGISRPDIRIAHEPPPQGSFLTMAAVIVSLDGTRMCKHSH 448
Query: 279 N---GNRCDAINIGRDAAQYI-RFISNKNVF 305
+ DA +G A+ + + + +
Sbjct: 449 TQLCRSEKDAEQLGILVAEELEHHQNARAIL 479
>gi|19849545|gb|AAL12221.1| porphobilinogen deaminase [Triticum aestivum]
Length = 198
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 77/156 (49%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A +TR L H I II + T GD I ++ L +IGGKGL
Sbjct: 43 IRIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIIIIKTTGDMILDKPLADIGGKGL 102
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L
Sbjct: 103 FTKEIDDALLEGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPA 162
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159
SVIG++SLRR++ +L + V++FRG ++TRL
Sbjct: 163 GSVIGSASLRRQSQILYKYPSLKVVNFRGNVQTRLR 198
>gi|332295808|ref|YP_004437731.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796]
gi|332178911|gb|AEE14600.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796]
Length = 297
Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 11/301 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ IGTR S LAL A + I II GD+ L E
Sbjct: 1 MIER-IVIGTRGSKLALTQARYVAEFINKFDSTIKIEIKIIKT--TGDK-LMVALHEAPE 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117
+GLF +EIE+ L++ +ID AVHS KDMP + + L+I A RED DV + ++
Sbjct: 57 RGLFVKEIEEALLNKDIDLAVHSMKDMPAEAVSELEIFAVPVREDPSDVIVPRKELSIEN 116
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177
L D++ +SV TSSLRR +LL + + + D RG I+TRL KL+ +++A A +
Sbjct: 117 LDDISPNSVFATSSLRRISLLNNFFTFKEIKDIRGNIDTRLKKLDEGFCDYLIMAKAALN 176
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAF 236
RL K L+ F P+ QGA+ I+ + + +++K ++ +T S + ER
Sbjct: 177 RLGI-KRNYITLDPFTFVPAVAQGALAIQGRRKDFNRFAKIIKFLDDFNTRISTDIERRV 235
Query: 237 LAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295
L + G C+ + K + + DG I + + D + + +
Sbjct: 236 LKLIGGGCQIPFGCYVCPIKNKSFKISAFI-EKDGNIRRVLFEEDFKKDKNEVANEIYKR 294
Query: 296 I 296
+
Sbjct: 295 L 295
>gi|4884830|gb|AAD31824.1|AF131199_3 porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5]
Length = 144
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSD 144
L S++GTSSLRR+A LL R D
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPD 142
>gi|153865130|ref|ZP_01997767.1| Porphobilinogen deaminase [Beggiatoa sp. SS]
gi|152145375|gb|EDN72233.1| Porphobilinogen deaminase [Beggiatoa sp. SS]
Length = 211
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 1/207 (0%)
Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
+ RE+ D F+S+T +L L +++GTSSLRR++ LL R D+ + RG + TRL+K
Sbjct: 1 MRREEPFDAFVSNTYATLAALPEGAIVGTSSLRRQSQLLAHRPDLQIRSLRGNVGTRLSK 60
Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
L+N AI+LA G+KRL + I+EI++ P+ GQGAI IE ++ + ++ +
Sbjct: 61 LDNGDYDAIVLAAVGLKRLGLVERIREIIDSTIMLPAIGQGAIGIECRQDDLETRQHIDN 120
Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRN 279
+N DT D V ERA L+G C+ IAG+A + L G+V +G+ +
Sbjct: 121 LNDPDTQDCVIAERALNESLEGGCQVPIAGYAEIQSSENLTMRGLVGDIEGQHILRHNLQ 180
Query: 280 GNRCDAINIGRDAAQYIRFISNKNVFN 306
G R A +G+ A+ + +
Sbjct: 181 GARHLAAELGKSLAKVLLTQGAAQILE 207
>gi|257076597|ref|ZP_05570958.1| porphobilinogen deaminase [Ferroplasma acidarmanus fer1]
Length = 285
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 12/289 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P IGTR S LAL A + +L + + I ++ GD N L + G+F
Sbjct: 2 PVTIGTRNSKLALIQANSVKDALESR----GYEVNIKSYTSAGDSNKNIPLYRMSSTGVF 57
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+ ++++ GEID AVHSAKD+P+ + KGL+I+A R+D RDV IS T L+++
Sbjct: 58 VDELNERVLKGEIDLAVHSAKDIPSNIQKGLEITAVTGRDDFRDVLISRT--PLEEMTAG 115
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
SVIGTSS+RR + +I+V D RG I+TR++K K I++A A KR+K +
Sbjct: 116 SVIGTSSMRRIRQAMTVNPEITVSDIRGNIDTRISKYTEKKYTGIIIAMAAYKRMKLDIE 175
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
IL+ E F P+P QG I I N+P + + IN +T+ + ER L+ C
Sbjct: 176 HF-ILSEEQFLPAPNQGIIAIVGKSNSPASIISGE-INDRETYRDMKNERFIATSLNLGC 233
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI--FHEVSRNGNRCDAINIGRD 291
+ + K + L SD + + I G
Sbjct: 234 SMPVGILS--KDGKIKTRFYSLDSDEHRDMVFSAENLDSVVEHIKEGIS 280
>gi|168705543|ref|ZP_02737820.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246]
Length = 140
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGPKVSLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL +
Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFASLDE 118
Query: 121 LALHSVIGTSSLRRKALL 138
L L S++GTSSLRR+A L
Sbjct: 119 LPLGSIVGTSSLRRQAQL 136
>gi|330945695|gb|EGH47153.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 191
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG
Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL
Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFR 151
L S++GTSSLRR+A LL R +
Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRDASFARSQK 149
>gi|307254893|ref|ZP_07536715.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306862134|gb|EFM94106.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
Length = 174
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 82/167 (49%)
Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198
+ + V RG + TRL+KL+N + AI+LA AG+ RL + I+ +++E P+
Sbjct: 1 MAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMPERIRSFISVEQSLPAA 60
Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
GQGA+ IET V++ + + +NH T V ERA L G C+ I GFA G+
Sbjct: 61 GQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQGGCQVPIGGFATLNGNE 120
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ +V A DG S +R +A +G A+ + +
Sbjct: 121 ITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGADKIL 167
>gi|87886445|dbj|BAE79637.1| porphobilinogen deaminase [Danio rerio]
Length = 203
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ R+GTR S LA L +++ P I+ +ST GD+I + L++IG K L
Sbjct: 18 RVIRVGTRKSQLARIQTDSVVEKLKELY--PDVLFEIVAMSTTGDKILDTALSKIGEKSL 75
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120
FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L
Sbjct: 76 FTKELENALEKNEVDLVVHSLKDLPTVLPGGFTIGAVLKRENPHDAVVLHPKNKGKRLDS 135
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN 163
L+ SVIGTSSLRR A L + + D RG + TRL KL+
Sbjct: 136 LSNKSVIGTSSLRRAAQLKKRXXHLEFKDIRGNLNTRLKKLDE 178
>gi|296131260|ref|YP_003638510.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109]
gi|296023075|gb|ADG76311.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109]
Length = 342
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 91/340 (26%), Positives = 140/340 (41%), Gaps = 41/340 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M ++ RIGTR S LAL + + + + + T+GDR+ +L +GG
Sbjct: 1 MPQQ-VRIGTRASALALTQTGHVA---DALADLADLAVETVRVRTQGDRVR-ASLASLGG 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G+F + L+ G D AVHS KD+PT GL ++A PR D RD + +L
Sbjct: 56 TGVFVTALRDALLDGRCDVAVHSLKDLPTGPADGLVVAAVPPRADARDALCARDGLTLAT 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN------------------ 162
L + IGT S RR A L R D+ V+D RG + TRL ++
Sbjct: 116 LPAGARIGTGSPRRAAQLRALRPDVDVVDIRGNVGTRLGRVRGLDATTVATGSQVGPDAP 175
Query: 163 ---------NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
A++LA AG+ RL + + E + P+PGQGA+ +E +
Sbjct: 176 HPGVATDAPRGDLDAVVLAAAGLGRLGRLDAVTEWFAPDVLAPAPGQGALAVEVRTADAA 235
Query: 214 AQELVKV----INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLA 267
A + ++ T +V ERA LA L+ C + + + L +V A
Sbjct: 236 ADTPLAHALRALDDPPTRRAVVAERAVLARLEAGCAAPVGAWGRVDDATGALALDAVVAA 295
Query: 268 SDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISNKNV 304
DG + A +GR A+ + +
Sbjct: 296 VDGSRVLRLAARGAADDDAAADALGRQLAEDLLAAGADRL 335
>gi|297180547|gb|ADI16759.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0010_11B23]
Length = 292
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 80/252 (31%), Positives = 126/252 (50%), Gaps = 10/252 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI TR S LAL + ++K N I T+GDR + + K F
Sbjct: 1 MRIATRSSKLALKQVDIFKD----LYKTQEINFEIKTQITEGDRKSKKGENLF-DKAHFV 55
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
E++E L++ + D A+HS KDM +GL+I A + + DV + +L DLA +
Sbjct: 56 EDLESSLLNYDADIAIHSLKDMSCHDTEGLEIYAAIEHQSRSDVMVYKDQINLNDLA-NI 114
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGTSSLRR + + + + RG I+TRL KL+ +K AI+LA AGI+RL
Sbjct: 115 KIGTSSLRRTRQCKHFLKNNNCSEIRGNIDTRLLKLHEDKFDAIILAKAGIERLGLNVNF 174
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
++ DF P+ GQG I ++ ++ K + L+ I + + + ER + L+ +C
Sbjct: 175 IDL----DFLPAIGQGIIAVQCRSDDKKTKTLLDQIKNFELLQMIEIERRIVRNLNATCN 230
Query: 246 SAIAGFAYCKGS 257
SA++ + G
Sbjct: 231 SALSIRSKIDGD 242
>gi|3172397|gb|AAC18581.1| porphobilinogen deaminase [Brevibacillus brevis]
Length = 151
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF
Sbjct: 3 KWKVGTRRSKLALTQTNWVVDKLK--GFAPEADFELHEIVTKGDRILDVTLSKVGGKGLF 60
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+EIE+ L E D AVHS KDMP +L +GL I A R D RDV +S ++L +L
Sbjct: 61 VKEIEQSLFDKETDFAVHSLKDMPAELPEGLVIGAIPKRVDPRDVLLSKDGKTLDELPQG 120
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155
+++GTS+LRR A +L R DI + RG I+
Sbjct: 121 ALVGTSTLRRSAQILAHRPDIQIESLRGNID 151
>gi|294653592|ref|NP_714555.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str.
56601]
gi|293630693|gb|AAN51570.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str.
56601]
Length = 542
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 35/282 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +IG+R S LA + +L K P + + GD+ L ++G
Sbjct: 1 MS-RILKIGSRKSALAKLQTYLVLGALKK--KFPEIQVELFFREASGDQDLQTPLWKMGT 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+FT+++ L+ ++D +HS KD+ + I L R D RDV + + K
Sbjct: 58 KGVFTQDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKY 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAIL 170
I TSS RR+ L ++ S + RG I+TR+ K + + ++
Sbjct: 118 SPSVLKIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLV 177
Query: 171 LAYAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETH 208
LA A + RL ++ + +I + P +PGQGAI E
Sbjct: 178 LAKAALDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVR 237
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+ + ++ ++ + +V ER L G C I
Sbjct: 238 TEDNWVLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGV 279
>gi|45655592|ref|YP_003401.1| porphobilinogen deaminase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602563|gb|AAS72038.1| porphobilinogen deaminase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 547
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 34/279 (12%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +IG+R S LA + +L K P + + GD+ L ++G KG+
Sbjct: 8 RILKIGSRKSALAKLQTYLVLGALKK--KFPEIQVELFFREASGDQDLQTPLWKMGTKGV 65
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+++ L+ ++D +HS KD+ + I L R D RDV + + K
Sbjct: 66 FTQDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKYSPS 125
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAILLAY 173
I TSS RR+ L ++ S + RG I+TR+ K + + ++LA
Sbjct: 126 VLKIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLVLAK 185
Query: 174 AGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNN 211
A + RL ++ + +I + P +PGQGAI E +
Sbjct: 186 AALDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVRTED 245
Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250
+ ++ ++ + +V ER L G C I
Sbjct: 246 NWVLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGV 284
>gi|28202885|gb|AAO35329.1| porphobilinogen deaminase [Clostridium tetani E88]
Length = 218
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 79 CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALL 138
AVHS KD+P ++ I A RED+RD F+S +L S IGTSS RR + +
Sbjct: 1 MAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSGSKIGTSSRRRSSQI 60
Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198
R D+ V+ RG ++TRL K+ +LA AG+KRL E+VI + + E+ P+
Sbjct: 61 KILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEVITDYFSPEEMVPAI 120
Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
GQGA+ IE + +K I+HE+T V ER+F+ L G C S I A +
Sbjct: 121 GQGALGIEIKKYED-VIDYIKGIDHEETRICVEGERSFMEALKGDCHSTIGAHAIVENDL 179
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+Y G + +GK + G + + +G+ A I
Sbjct: 180 MYMTG-IFEVNGK-IVKKDIEGKKENYKQLGKTLADRIMK 217
>gi|217073904|gb|ACJ85312.1| unknown [Medicago truncatula]
Length = 243
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 79/154 (51%), Positives = 103/154 (66%), Gaps = 3/154 (1%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63
RIGTR SPLALA A ETR L+ H I I+ + T GD+I ++ L +IGGKGL
Sbjct: 62 IRIGTRGSPLALAQAHETRDKLIASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL
Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 181
Query: 124 HSVIGTSSLRRKALL-LRWRSDISVIDFRGKIET 156
SVIGT+SLRRK+ + R+ S +FRG ++T
Sbjct: 182 GSVIGTASLRRKSQILHRYPSLSVQDNFRGNVQT 215
>gi|116329566|ref|YP_799285.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116122459|gb|ABJ80352.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
Length = 542
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 40/315 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I +R S LA + +L K P I + GD L ++G
Sbjct: 1 MS-RVLKIASRKSALAKLQTYLVLDALKK--KFPNIQIELHFREASGDLDLQTPLWKMGT 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+FT+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+
Sbjct: 58 RGVFTQDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKN 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAIL 170
I TSS RR+ L ++ ++ + RG I+TR+ K N+ + ++
Sbjct: 118 FPSELKIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWRNSDSDGLV 177
Query: 171 LAYAGIKRLKKEKV----------------------IKEILNIEDFPPSPGQGAICIETH 208
LA A + RL E I ++L + P +P QGAI E
Sbjct: 178 LAKAALDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVR 237
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266
++ A V+ ++ + +V ER L G C I K G LY G+
Sbjct: 238 TDDEWALGFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGL-- 295
Query: 267 ASDGKIFHEVSRNGN 281
+D E+ +
Sbjct: 296 -TDSGEILEIEEQFS 309
>gi|170044628|ref|XP_001849943.1| porphobilinogen deaminase [Culex quinquefasciatus]
gi|167867697|gb|EDS31080.1| porphobilinogen deaminase [Culex quinquefasciatus]
Length = 474
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 118/240 (49%), Gaps = 31/240 (12%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVII------------------------PLSTKGD 48
S LAL S L ++ P I ++T GD
Sbjct: 167 SKLALIQTKYVISCLQKLN--PDVVYEIRKYFQHVHLCWHVPSYLLAFFLSPDTMTTVGD 224
Query: 49 RITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108
R+ N++L +IG K LFT+++E L +G +D VHS KD+PT L G+ I A L R+D RD
Sbjct: 225 RVLNKSLPKIGEKSLFTKDLEDALRTGGVDFVVHSLKDLPTALPLGMAIGAVLERDDPRD 284
Query: 109 VFISHTAQSLK---DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN- 164
+ + A + L SV+GTSSLRR A L R ++ V D RG + TRL KL+ +
Sbjct: 285 ALVLNEAHRGRTLSTLPKGSVVGTSSLRRSAQLARKYENVVVCDIRGNLNTRLAKLDADG 344
Query: 165 -KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
K I+LA AG+ R+ + +++ + + GQGA+ +E N+ +++ + H
Sbjct: 345 SKFAGIILAQAGLVRMGWNARVSQVIEPGEILYAVGQGALAVECRSNDEYILDMLSKLCH 404
>gi|116332455|ref|YP_802172.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
gi|116127322|gb|ABJ77414.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 542
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 40/315 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +I +R S LA + +L K P I + GD L ++G
Sbjct: 1 MS-RVLKIASRKSALAKLQTYLVLDALKK--KFPNIQIELHFREASGDLDLQTPLWKMGT 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+FT+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+
Sbjct: 58 RGVFTQDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKN 117
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAIL 170
I TSS RR+ L ++ ++ + RG I+TR+ K N+ + ++
Sbjct: 118 FPSELKIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWGNSDSDGLV 177
Query: 171 LAYAGIKRLKKEKV----------------------IKEILNIEDFPPSPGQGAICIETH 208
LA A + RL E I ++L + P +P QGAI E
Sbjct: 178 LAKAALDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVR 237
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266
++ A V+ ++ + +V ER L G C I K G LY G+
Sbjct: 238 TDDEWALSFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGL-- 295
Query: 267 ASDGKIFHEVSRNGN 281
+D E+ +
Sbjct: 296 -TDSGEILEIEEQFS 309
>gi|183220566|ref|YP_001838562.1| porphobilinogen deaminase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910676|ref|YP_001962231.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167775352|gb|ABZ93653.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778988|gb|ABZ97286.1| Porphobilinogen deaminase (PBG; Hydroxymethylbilane synthase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 511
Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 40/317 (12%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + +IG R S L+ ++L + +K N I + GD+ L + GG
Sbjct: 1 MSE-TIKIGGRSSLLSRIQIHTVTNALKEKNK--DLNFETIFRESSGDKDLTTPLWQFGG 57
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
+G+FT+++++ L++ ++D +HS KDM K K + LPRED+RDV + + +
Sbjct: 58 QGIFTKDLQEDLLNHKVDIVIHSYKDMDLKERKETTLIPVLPREDVRDVLLFKKNKW-IN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAIL 170
L I TSS RR+ + + + RG I+TRL K ++++ IL
Sbjct: 117 LPNEITILTSSPRREYHIKEFLRNYFPTPINNFEIKIESVRGNIQTRLRKYLDHESGGIL 176
Query: 171 LAYAGIKRLKKEKVIKE----------------------ILNIEDFPPSPGQGAICIETH 208
+A A + R+ + + +L FP +P QGA+C E
Sbjct: 177 VAKAALDRILNFQDPDQLLPELKEIQQLIKDTMNVSLFMVLPSSIFPSAPAQGALCAEIR 236
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266
+ + L+ I+ +T + N ER L+ G C I + G + GI
Sbjct: 237 KEDKHLETLLSKISDSETNLTTNEEREILSRYGGGCHQKIGVTVLHREYGKVCFIRGI-- 294
Query: 267 ASDGKIFHEVSRNGNRC 283
DG+I + +
Sbjct: 295 TEDGQILQTKELSESPN 311
>gi|56752693|gb|AAW24560.1| SJCHGC02909 protein [Schistosoma japonicum]
Length = 268
Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats.
Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 21/264 (7%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+G+R S LAL S L P ++ ++T GD I + L++IG K
Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV +
Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164
DL + + +GTSS+RR A L+R + I RG + TRL KL+
Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183
Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
A++LA AG++R+ I ++ + D + QGA+ + +
Sbjct: 184 SYDALILAKAGVERMGWVDRIDQV--LSDSFYAVSQGALAANVFKTILLSWIYYHLFMTS 241
Query: 225 DTWDSVNCERAFLAELDGSCKSAI 248
A S++
Sbjct: 242 RVVCLNGYRPAQFGLYSSEISSSV 265
>gi|307826231|ref|ZP_07656440.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732693|gb|EFO03561.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 155
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 82/150 (54%)
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +++P+
Sbjct: 1 TRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIDDPEIN 60
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
E++ ++ +T V ERA A L G C+ IAGFA +G L+ G+V + DG + +
Sbjct: 61 EMLSALHDSETGLCVAAERAMNARLSGGCQVPIAGFATMQGEQLFMRGLVGSPDGSVIYR 120
Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
R + A IG+ A+ + +
Sbjct: 121 AERTDSVDSAEAIGKMIAEDLLAQGADEIL 150
>gi|213616301|ref|ZP_03372127.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 168
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/164 (42%), Positives = 96/164 (58%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64
Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153
GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG
Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS 197
+ TRL KL+N AI+LA AG+KRL E I+ L + P+
Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPA 168
>gi|225016972|ref|ZP_03706164.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum
DSM 5476]
gi|224950286|gb|EEG31495.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum
DSM 5476]
Length = 292
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 65/296 (21%), Positives = 109/296 (36%), Gaps = 16/296 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + IG + L+ A L H P ++P+ G
Sbjct: 11 KMEKIHIGCAQNELSRNFADHLAQCLHSYH--PELTAELVPIKNTG---------ADEEP 59
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
L +E+ LI +D AV+ A D+P +L L I A RED+RD + + D
Sbjct: 60 TLVARRLEQALIDCRVDLAVYHALDLPLELHPELPIVAISSREDVRDALVFPQGKQQPDF 119
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181
IG +S R++ L R D G + +L +L+ + A++L A +
Sbjct: 120 --SKPIGCTSRRQQVQLHRVFPDCITAPVGGTVAEQLARLDQGEYGALVLPAAQLGWFGL 177
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
++ + ++ +E+ P+ G AI ++ H A
Sbjct: 178 QQRVGQLFCVEELVPAAGHAAIAVQAREEFDAGLLE---CFHSWDSWDAVFCEREFARAL 234
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
IA A KG TL G I+ S +G+R DA +G + A ++
Sbjct: 235 EEEPGPIAVHAEVKGETLSVVGFYADEAEGIYRMSSMSGDRKDAGRLGFELAAELK 290
>gi|167835847|ref|ZP_02462730.1| porphobilinogen deaminase [Burkholderia thailandensis MSMB43]
Length = 159
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGK 153
+V+GTSSLRR+A+L + V RG
Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGN 159
>gi|297180918|gb|ADI17122.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0070_03O15]
Length = 297
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 84/309 (27%), Positives = 127/309 (41%), Gaps = 23/309 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR S LAL + +S + P II + T+GD+ + K F
Sbjct: 1 MKIATRSSKLALEQTYFFQSWI------PKQPTKIIEIKTEGDKKSAMGEVLF-DKANFV 53
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+IE+ LI D A+HSAKDMP K L + PR D+ I
Sbjct: 54 SDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPR-SRSDLLIFRKDIDPV-FKKDM 111
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG +RLK +
Sbjct: 112 KLGTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAGCQRLKIDFED 171
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAELD 241
+ + GQG + ++ +N A+ E + D E+ L ++
Sbjct: 172 LNYIELG-HLTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIHDETEMEKRLLEKIG 230
Query: 242 GSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
SC SAIA A +G + G V + +S G D DA ++
Sbjct: 231 ASCNSAIAVRANHEGPKGVDKI-IKGEVYGLN----EYISFEGKSSDVDTAINDAIDMLQ 285
Query: 298 FISNKNVFN 306
+ + N
Sbjct: 286 NKNGLELLN 294
>gi|47779350|gb|AAT38579.1| predicted porphobilinogen deaminase [uncultured gamma
proteobacterium eBACHOT4E07]
Length = 286
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 80/298 (26%), Positives = 127/298 (42%), Gaps = 18/298 (6%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I TR S LALA E S + II + T+GD +++ T K F
Sbjct: 2 TLKIATRSSKLALAQVDEFVSE------YNISDYKIIKIKTEGDVKSSKGETLF-DKAHF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+I+K ++ G+ D AVHSAKD P K G++ + + R +DV I +
Sbjct: 55 VTDIQKSILRGDADIAVHSAKDTPAKKTNGIERNFIISRTS-KDVLIFKDNN---NFNSS 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSSLRRK + +V D G ++TRL KL I+LA AG + +
Sbjct: 111 MKLGTSSLRRKLQAFHFLKSTNVFDINGNVDTRLEKLYRGDYDCIILAKAG--LERLRLL 168
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ---ELVKVINHEDTWDSVNCERAFLAELD 241
+ D+ + GQG + +E + + + E+ I ++ + + ER L +D
Sbjct: 169 KELNYEEMDWITASGQGTLAVEMTESYHENEKLLEIHSNIKNKLATNGIEYERNILERVD 228
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
C SAIA + + S G + K F S + +I R + +
Sbjct: 229 AGCNSAIAIESISENSKQIIRGEIYGV--KEFITFSGASDIEAIEDIERQNGRRLLNE 284
>gi|297622583|ref|YP_003704017.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093]
gi|297163763|gb|ADI13474.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093]
Length = 284
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 20/285 (7%)
Query: 16 ALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75
ALA A + L + P +I L ++G +E+ L G
Sbjct: 14 ALAQARAVLAELSE--GWPDVSISQRTLQSRG----------------GADELLHALQGG 55
Query: 76 EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRK 135
I AV S +P L GL ++A R + R ++ A+SL DL + +G +LR +
Sbjct: 56 RIHIAVQSLDTLPLTLPDGLSVAAVTKRLEPRSALLARGAKSLGDLPKGAEVGVPTLRDR 115
Query: 136 ALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195
A +L R D+ V F G++E L L+ + A++ A +L + + + +L + P
Sbjct: 116 AFVLAARRDLKVRVFTGELEDALALLSAQELGALVWPSAPFIQLGQRERVTTLLEPQQLP 175
Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
P+PGQGA+ + ++ A +L + H ++D ERAF ++ S I FA
Sbjct: 176 PAPGQGALALVVRDDDDLASDLAYTLQHRPSFDRACAERAFARQMSSSAHH-IGAFASVT 234
Query: 256 -GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
L+ G +G + G+ +A +GR+ AQ +
Sbjct: 235 ADGELHLLGAAARDEGDWMIQAEVTGDAAEAEELGRELAQDVLEQ 279
>gi|297181506|gb|ADI17693.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0130_23I23]
Length = 297
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 83/309 (26%), Positives = 127/309 (41%), Gaps = 23/309 (7%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+I TR S LAL + +S + P II + T+GD+ + K F
Sbjct: 1 MKIATRSSKLALEQTYFFQSWI------PKQPTKIIEIKTEGDKKSAMGEVLF-DKANFV 53
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+IE+ LI D A+HSAKDMP K L + PR D+ I
Sbjct: 54 SDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPR-SRSDLLIFRKDIDPV-FKKDM 111
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
+GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG +RLK +
Sbjct: 112 KLGTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAGCQRLKIDFED 171
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAELD 241
+ + GQG + ++ +N A+ E + D E+ L ++
Sbjct: 172 LNYIELG-HLTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIHDETEMEKRLLEKIG 230
Query: 242 GSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
SC SAIA A +G + G + + +S G D DA ++
Sbjct: 231 ASCNSAIAVRANHEGPKGVDKI-IKGEIYGLN----EYISFEGKSSDVDTAINDAIDMLQ 285
Query: 298 FISNKNVFN 306
+ + N
Sbjct: 286 NKNGLELLN 294
>gi|29841142|gb|AAP06155.1| similar to GenBank Accession Number P19356 hydroxymethylbilane
synthase (hemC) in Rattus sp [Schistosoma japonicum]
Length = 277
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+G+R S LAL S L P ++ ++T GD I + L++IG K
Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119
LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV +
Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123
Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164
DL + + +GTSS+RR A L+R + I RG + TRL KL+
Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183
Query: 165 KAHAILLAYAGIKRLKKEKVIKE 187
A++LA AG++R+ I +
Sbjct: 184 SYDALILAKAGVERMGWVDRIDQ 206
>gi|218677853|ref|ZP_03525750.1| porphobilinogen deaminase [Rhizobium etli CIAT 894]
Length = 123
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 79/123 (64%), Positives = 92/123 (74%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L+EIGG
Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLTTKGDRITDRSLSEIGG 60
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLFTEE+E+KL +GE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D
Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMPTNLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120
Query: 121 LAL 123
L
Sbjct: 121 LPH 123
>gi|260890848|ref|ZP_05902111.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Leptotrichia hofstadii F0254]
gi|260859401|gb|EEX73901.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Leptotrichia hofstadii F0254]
Length = 193
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 20/192 (10%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44
M+ IGTR S LALA A + + L+ + K I + +
Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIKKYDELRENESFCEIEGFEKKNSLEIELKVIV 60
Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101
TKGD+ R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + +
Sbjct: 61 TKGDKDL-RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFP 119
Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
RED RDV +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL
Sbjct: 120 MREDNRDVLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179
Query: 162 NNNKAHAILLAY 173
+
Sbjct: 180 MMGNMMRLCWLR 191
>gi|317471679|ref|ZP_07931020.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA]
gi|316900783|gb|EFV22756.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA]
Length = 139
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
ME K RIG+R S LA+A L + P + ++ L T GD+I N+TL +IGG
Sbjct: 1 MEPKRLRIGSRESLLAVAQTRLVIEQLKANY--PELSFELVTLKTTGDKILNKTLDKIGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ ++
Sbjct: 59 KGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFEE 118
Query: 121 LALHSVIGTSSLRRKALLLRWRS 143
VIG+SS RR R
Sbjct: 119 --FGQVIGSSSARRVLQARRLFP 139
>gi|15791132|ref|NP_280956.1| porphobilinogen deaminase [Halobacterium sp. NRC-1]
gi|169236887|ref|YP_001690087.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Halobacterium salinarum R1]
gi|25453030|sp|Q9HMY5|HEM3_HALSA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|10581740|gb|AAG20436.1| porphobilinogen deaminase [Halobacterium sp. NRC-1]
gi|167727953|emb|CAP14741.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Halobacterium salinarum R1]
Length = 396
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+ TR S LAL A E +L D H++ ++ + T+GDR+T+ ++++G
Sbjct: 1 MSSQQIRLATRGSDLALRQAGEVVDTLEDRR----HDVELVEVETEGDRVTDALISDLGK 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F ++++++ G +D AVHS KD+PT++ + L ++A RE+ DV ++ L+D
Sbjct: 57 TGAFVRALDQEVMEGTVDAAVHSMKDVPTEVPEDLVVAAVPHRENPADVLVTPDGTDLED 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
L SV+GT+SLRR A + R + V RG + TR+ KL
Sbjct: 117 LPAGSVVGTASLRRGAQVQAHRPGLDVEPIRGNVGTRVEKL 157
Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 1/143 (0%)
Query: 165 KAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ A+++A G++R V E L+ P+ GQGA+C+ ++ L + H
Sbjct: 248 EYDALVMARVGLERTGLLHHVGIEELSTGTHVPATGQGALCVTARRDSDVVDTLRDALEH 307
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
T V ER L EL G C + I A +G T+ V + DG +R +
Sbjct: 308 VRTRVEVTAERVVLEELGGGCIAPIGVHALVQGDTIRTAVQVFSQDGSEQVGETRELDAE 367
Query: 284 DAINIGRDAAQYIRFISNKNVFN 306
R+ A +R ++
Sbjct: 368 QYATDARELAADLRDRGAADLIE 390
>gi|71005230|ref|XP_757281.1| hypothetical protein UM01134.1 [Ustilago maydis 521]
gi|46096460|gb|EAK81693.1| hypothetical protein UM01134.1 [Ustilago maydis 521]
Length = 770
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGG--KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLL 92
PH I +ST GD+ L IGG K ++T+E+E L G +D VH KD+PT L
Sbjct: 248 PHAFPITSMSTAGDQNLRSPLYVIGGEGKAIWTKELEVALEQGAVDAIVHCLKDVPTALP 307
Query: 93 KGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149
+GL+++A L RED RD + + L +L + SVIGTSS+RR A L R + D
Sbjct: 308 QGLELAAVLEREDPRDALVVKAGLPYKVLDELPVGSVIGTSSVRRVAQLRRRYPHLVFSD 367
Query: 150 FRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE- 206
RG I TRL KL+ N A++LA AG+ RL I L+ S GQG++ IE
Sbjct: 368 VRGNINTRLAKLDAPNGPYTALILAAAGLVRLNMHARITAFLSSPVLLHSVGQGSLAIEV 427
Query: 207 ---------THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS 257
T + + +EL++ I ER+ L EL+G C +
Sbjct: 428 RTPPEGADPTTNRDARIRELIRSIGDWRATFRAEAERSLLKELEGGCSIPVGVETRFDD- 486
Query: 258 TLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288
G R +AI +
Sbjct: 487 -----------------HDQVEGQRSEAIAL 500
Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYI-RFISNKNVFN 306
+G TL+ IV++ DG S + + DA +G A + + +
Sbjct: 600 EGRTLHLDAIVVSLDGSQESRYSASKHCTTVKDARELGIHVAHELAHKKGARAILE 655
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK 32
+ +R S LAL + + L
Sbjct: 147 TLVLASRNSQLALVQSSHVSAMLEARFG 174
>gi|290770684|emb|CAY79080.2| Hem3p [Saccharomyces cerevisiae EC1118]
Length = 239
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 11/231 (4%)
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRS 143
MPT L +G ++ R D D + +SL DL ++GTSS+RR A L R
Sbjct: 1 MPTLLPEGFELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVGTSSVRRSAQLKRKYP 60
Query: 144 DISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201
+ RG I+TRL KL++ + I+LA AG+ R+ E I + + + + GQG
Sbjct: 61 HLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQG 120
Query: 202 AICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--L 259
A+ IE + K +++ I + ERA + L+G C I + T L
Sbjct: 121 ALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGGCSVPIGVESKYNEETKKL 180
Query: 260 YFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYIRFISNKNVFN 306
IV+ +G E D++ G+ A+ + K + +
Sbjct: 181 LLKAIVIDVEGTEAVEDEIEMLIENVKEDSMACGKILAERMIADGAKKILD 231
>gi|89898473|ref|YP_515583.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56]
gi|89331845|dbj|BAE81438.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56]
Length = 243
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P RI +R S LA A +E L P I I ++T+GD+ L I
Sbjct: 18 RRPLRIASRKSTLAKAQVYECVRLLRS--WFPKLWIQIQTVNTQGDKDKTTPLRLIENSQ 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++K ++SG AVHSAKD+P + + A D D+ + K
Sbjct: 76 FFTDAVDKLVLSGNSHLAVHSAKDLPNPPVTTII--AITQGLDPADLLVYGNRYLWKRFP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR+ +L + ++ RG IE RL +L + K AI++A A RL +
Sbjct: 134 KNPKLGSSSLRREEILKKLFPAGKILHIRGTIEERLEQLESGKYDAIIVAKAAALRLHLK 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
E L P P QG + + K E K + + + E
Sbjct: 194 LPYTEELPP---PYHPLQGRLSVTAA----KNIESWKKLLYPLNTSDITQENTL 240
>gi|256026474|ref|ZP_05440308.1| porphobilinogen deaminase [Fusobacterium sp. D11]
gi|289764485|ref|ZP_06523863.1| porphobilinogen deaminase [Fusobacterium sp. D11]
gi|289716040|gb|EFD80052.1| porphobilinogen deaminase [Fusobacterium sp. D11]
Length = 220
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143
KDMP KGL A RED RDV +S L L + IGTSSLRR L R
Sbjct: 1 MKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVTLPQGAKIGTSSLRRAMNLKAVRP 59
Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203
D + RG I TRL KL AI+LA AG+KR I E L+ E FPP+P QG +
Sbjct: 60 DFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTGMTDKITEYLSGEVFPPAPAQGVL 119
Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263
I+ N+ + +E++K I++E+ V ER F DG C + + ++ G + F
Sbjct: 120 YIQCRENDKEIKEILKSIHNENVAKIVEIEREFSKIFDGGCHTPMGCYSQVNGDKIKFTA 179
Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
+ L GK + I AA+ I+ NK
Sbjct: 180 VYLDE-GKQ-IRAVIEDDLTKGKEIAYMAAEEIKNKINKG 217
>gi|329942690|ref|ZP_08291469.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci Cal10]
gi|332287285|ref|YP_004422186.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC]
gi|313847869|emb|CBY16864.1| putative porphobilinogen deaminase [Chlamydophila psittaci RD1]
gi|325506761|gb|ADZ18399.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC]
gi|328814950|gb|EGF84939.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci Cal10]
gi|328914531|gb|AEB55364.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila psittaci 6BC]
Length = 245
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P RI +R S LA A E L P I I +ST+GD+ L +
Sbjct: 18 RRPLRIASRKSTLAQAQVHECVRLLRS--WFPKLWIQIHTISTRGDKDKTTPLRLVENSQ 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++K +I G AVHSAKD+P + A D D+ + K
Sbjct: 76 FFTDAVDKLVIRGNCHLAVHSAKDLPDPPATPV--VAITKGLDPSDLLVYAERYLWKRFP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+G+SSLRR L + ++D RG IE RL +L N K AI++A A I RL
Sbjct: 134 KVPRLGSSSLRRGETLKTLFPEGRILDIRGTIEERLEQLENGKYDAIVIAKAAILRLHLH 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIET 207
++L P P QG + I
Sbjct: 194 LPYTKVLPP---PYHPLQGRLAITA 215
>gi|111220451|ref|YP_711245.1| porphobilinogen deaminase 1 [Frankia alni ACN14a]
gi|111147983|emb|CAJ59649.1| Porphobilinogen deaminase 1 (PBG 1) (Hydroxymethylbilane synthase
1) (HMBS 1) (Pre-uroporphyrinogen synthase 1) [Frankia
alni ACN14a]
Length = 402
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 108/195 (55%), Gaps = 4/195 (2%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
S LAL + + L + + ++P+ T GDR +++IGG G+F + L
Sbjct: 36 SALALTQSGMIAAQLRERV---GCAVDLVPIVTAGDRSPAE-ISQIGGTGVFVSALRDAL 91
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132
++GEID AVHS KD+PT GL ++A RED RDV +S + + L L + + T +
Sbjct: 92 LAGEIDLAVHSLKDLPTATPPGLVLAAVPTREDTRDVLVSPSGRGLAALGPGARVATGAP 151
Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192
RR A L V+ RG ++TRL K + + A++LAYAG+ RL + + EIL+ E
Sbjct: 152 RRAAQLRALGLGFDVVAIRGNVDTRLKKAIDGEVDAVVLAYAGLARLDRLDAVTEILDPE 211
Query: 193 DFPPSPGQGAICIET 207
P+PGQGA+ +E
Sbjct: 212 VMLPAPGQGALAVEC 226
>gi|167718597|ref|ZP_02401833.1| porphobilinogen deaminase [Burkholderia pseudomallei DM98]
Length = 142
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 57/132 (43%), Positives = 86/132 (65%), Gaps = 2/132 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +
Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPVG 130
Query: 125 SVIGTSSLRRKA 136
+V+GTSSLRR+A
Sbjct: 131 AVVGTSSLRREA 142
>gi|119587852|gb|EAW67448.1| hydroxymethylbilane synthase, isoform CRA_b [Homo sapiens]
Length = 171
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ + R+GTR S LA ++L + P II +ST GD+I + L++IG K
Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L
Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150
+ L SV+GTSSLRR A L R +
Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSI 166
>gi|62184962|ref|YP_219747.1| porphobilinogen deaminase [Chlamydophila abortus S26/3]
gi|62148029|emb|CAH63781.1| putative porphobilinogen deaminase [Chlamydophila abortus S26/3]
Length = 249
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+P RI +R S LA A E L P I I +ST+GD+ + +
Sbjct: 18 KRPLRIASRKSILAQAQVHECVRLLRS--WFPKLWIQIHTISTRGDKDKTTPIRLVENSQ 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++K +I G AVHSAKD+P + A D D+ + +
Sbjct: 76 FFTDTVDKLVIRGNCHLAVHSAKDLPDPPATPV--VAITKGLDPSDLLVYAERYLWQRFP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+G+SS RR L ++D RG IE RL +L N K AI++A A + RL +
Sbjct: 134 KVPRLGSSSSRRGETLKMLFPTGRILDIRGTIEERLEQLENGKYDAIVVAKAAVLRLHLQ 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIET 207
++L P P QG + I
Sbjct: 194 LPYTKVLPP---PYHPLQGRLAITA 215
>gi|13676388|dbj|BAB41183.1| porphobilinogen deaminase [Amaranthus tricolor]
Length = 198
Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 98/198 (49%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
+IGGKGLFT+EI++ L++ EID AVHS KD+PT L + + L RED+RD FIS TA
Sbjct: 1 ADIGGKGLFTKEIDEALLNNEIDIAVHSMKDVPTYLPDKIILPCNLEREDVRDAFISTTA 60
Query: 116 QSLKDLALHSVIGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174
SL DL SV+GT+SLRRK+ L R+ S + +FRG ++TRL KLN A LLA A
Sbjct: 61 SSLADLPAGSVVGTASLRRKSQLLHRYPSLEVLDNFRGNVQTRLRKLNEGLVQATLLALA 120
Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234
G+KRL + + +L+I+D P+ QGAI I ++ K + ++NHE+T +V CER
Sbjct: 121 GLKRLNMTENVSSVLSIDDMLPAVAQGAIGIACLQDDDKMANYLALLNHEETQLAVACER 180
Query: 235 AFLAELDGSCKSAIAGFA 252
AFL LDGSC++ IAG+A
Sbjct: 181 AFLETLDGSCRTPIAGYA 198
>gi|269302924|gb|ACZ33024.1| porphobilinogen deaminase [Chlamydophila pneumoniae LPCoLN]
Length = 234
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 7/222 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+P RI +R S LA A E S L + P + T GDR L +
Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDRDKKIPLHLVENSY 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++ + G D A+HSAKD+ L + A D+ + + L
Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDL--PETPSLPVVAITRCLHPADLLVYADHYVHEPLP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL
Sbjct: 134 LRPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLHLH 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
L P QG++ I + K ++L I+
Sbjct: 194 HAYSIELPP---PYHALQGSLAITAKDHAGKWKQLFTPIHCH 232
>gi|29840104|ref|NP_829210.1| porphobilinogen deaminase [Chlamydophila caviae GPIC]
gi|29834452|gb|AAP05088.1| porphobilinogen deaminase HemC, putative [Chlamydophila caviae
GPIC]
Length = 242
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
++P RI +R S LA A A E L P + I + T GD+ L +
Sbjct: 18 RRPLRIASRRSTLAQAQAHECVCLLRS--WFPKLWVQIHTVHTLGDKDKKTPLHLVENSQ 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++K ++ G AVHSAKD+ I A D D+ + K
Sbjct: 76 FFTDAVDKLVLRGNCHLAVHSAKDL--PNPSKTSIVAITNGLDPSDLLVYGERYLWKRFP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
+ +G+SSLRR +L ++D RG IE RL +L + K AI++A A + RL
Sbjct: 134 KNPRLGSSSLRRGEMLKNLFPKGQILDIRGTIEERLKQLESGKYDAIVVAKAAVIRLHLR 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIET 207
+ L P P QG + I
Sbjct: 194 LPYTKTLPP---PYHPLQGRLSITA 215
>gi|217070488|gb|ACJ83604.1| unknown [Medicago truncatula]
Length = 214
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALL-LRWR 142
KD+PT L + + LPRED+RD FIS +A SL DL SVIGT+SLRRK+ + R+
Sbjct: 1 MKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYP 60
Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202
S +FRG ++TRL KL+ A LLA AG KRL + + L+I+D P+ QGA
Sbjct: 61 SLSVQDNFRGNVQTRLRKLSEGVVKATLLALAGPKRLNMTENVTSTLSIDDMLPAVAQGA 120
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYF 261
I I N+ K E + +NHE+T +++CERAFL LDGSC++ IAG+A K F
Sbjct: 121 IGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLF 180
Query: 262 YGIVLASDGKIFHEVSRNGN--RCDAINIGR 290
G+V + DG E SR G D + +GR
Sbjct: 181 RGLVASPDGTRVLETSRIGPYAYEDMMKMGR 211
>gi|15617976|ref|NP_224260.1| porphobilinogen deaminase [Chlamydophila pneumoniae CWL029]
gi|15835588|ref|NP_300112.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138]
gi|16752992|ref|NP_445265.1| porphobilinogen deaminase [Chlamydophila pneumoniae AR39]
gi|33241388|ref|NP_876329.1| porphobilinogen deaminase [Chlamydophila pneumoniae TW-183]
gi|11386861|sp|Q9Z9C9|HEM3_CHLPN RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|4376307|gb|AAD18205.1| Porphobilinogen Deaminase [Chlamydophila pneumoniae CWL029]
gi|7189637|gb|AAF38528.1| porphobilinogen deaminase HemC, putative [Chlamydophila pneumoniae
AR39]
gi|8978426|dbj|BAA98263.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138]
gi|33235896|gb|AAP97986.1| hydroxymethylbilane synthase [Chlamydophila pneumoniae TW-183]
Length = 234
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 7/222 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
K+P RI +R S LA A E S L + P + T GDR L +
Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDREKKIPLHLVENSY 75
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
FT+ ++ + G D A+HSAKD+ L + A D+ + + L
Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDL--PETPSLPVVAITRCLHPADLLVYADHYVHEPLP 133
Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182
L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL
Sbjct: 134 LSPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLHLH 193
Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224
L P QG++ I + K ++L I+
Sbjct: 194 HAYSIELPP---PYHALQGSLAITAKDHAGKWKQLFTPIHCH 232
>gi|76801314|ref|YP_326322.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Natronomonas pharaonis DSM 2160]
gi|76557179|emb|CAI48754.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Natronomonas pharaonis DSM 2160]
Length = 361
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + R+ TR S LAL A +L + + ++ + T GD + + + +G
Sbjct: 1 MTE-TIRLATRGSDLALRQAQRVADALDSRRR----TVELVEVETTGDAVRDELIHRLGK 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F +++K+I G++D AVHS KDMPT+ L ++ R DV ++ +L
Sbjct: 56 TGAFVRSLDEKVIDGDVDAAVHSMKDMPTEFPDELVVAGVPERASPGDVLVTPDGDTLDS 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
L + +GTSSLRRKA LL R D+ V RG ++TR+ KL
Sbjct: 116 LPDGATVGTSSLRRKAQLLAARPDLDVQPLRGNVDTRVQKL 156
Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 9/152 (5%)
Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
IETR I+LA AG++R ++ E F P+ GQGA+ + T +
Sbjct: 212 IETRF--------DGIVLAEAGLQRTGLLAQVETERLPETFVPAAGQGALAV-TACDGDV 262
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273
Q L ++H T ER L L G C + + A +G + VL+ DG
Sbjct: 263 GQTLQNELDHPRTRVETTVERTILGTLGGGCVAPVGIHAVVRGEYVQASVRVLSQDGTEE 322
Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
E +R+ R+ A + ++
Sbjct: 323 IEATRDLPIERHPEAAREFADELADRGAADLI 354
>gi|159483239|ref|XP_001699668.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
gi|158281610|gb|EDP07364.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
Length = 380
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 145/318 (45%), Gaps = 26/318 (8%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLS--TKGDRITNRTLTEIGG 60
++P I TR S LA + + L+ ++ + + L ++GD +L +G
Sbjct: 60 QRPLVIATRPSKLAKEQTRQVQQLLLAAAQLKDEQLQLSTLELASRGDTTQGVSLRSLG- 118
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G FTEE+++ ++SG D +VHS KD P L GL ++A LPR D RDV I+ A SL +
Sbjct: 119 SGAFTEELDQAVLSGAADMSVHSLKDCPAALAPGLLLAACLPRADPRDVLIAPEATSLGE 178
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180
L S +GTSS RR A + + V+ RG +++RL ++ + A +LA AG+KRL
Sbjct: 179 LVPGSRVGTSSSRRAAQIKHSFPHLQVVQLRGNVDSRLGRIRSRDIGATVLAAAGLKRLG 238
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
D + GA+ + ++ L+ I+H T V ERA LA L
Sbjct: 239 VMN--------SDEGDTTATGAVGVVCRADDEWVVGLLDAISHRGTALEVAAERACLAAL 290
Query: 241 DG-------SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSR----NGNRCDA 285
G S IA + +T+ +V +GK + + DA
Sbjct: 291 LGGGGACQRSAFPDIAWACHTRHDPDSNTMDLDCLVADLEGKELFRYTEFYRPVIDEVDA 350
Query: 286 INIGRDAAQYIRFISNKN 303
+++G +R ++
Sbjct: 351 VSLGSLYGSLLRMMAPPG 368
>gi|15835189|ref|NP_296948.1| porphobilinogen deaminase [Chlamydia muridarum Nigg]
gi|270285361|ref|ZP_06194755.1| porphobilinogen deaminase [Chlamydia muridarum Nigg]
gi|270289377|ref|ZP_06195679.1| porphobilinogen deaminase [Chlamydia muridarum Weiss]
gi|301336758|ref|ZP_07224960.1| porphobilinogen deaminase [Chlamydia muridarum MopnTet14]
gi|11386847|sp|Q9PK95|HEM3_CHLMU RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|7190611|gb|AAF39408.1| porphobilinogen deaminase HemC, putative [Chlamydia muridarum Nigg]
Length = 242
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+ +R SPLA+ A E L P +I +T+GD + L + G F
Sbjct: 20 PLRLASRKSPLAVLQAHECLRRLQ--TFFPRLWGQVITETTQGDLDQHTPLHSVENTGFF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T++I+ + SG+ D A+HSAKD+ ++ A D RD+ + L+
Sbjct: 78 TDDIDFLVQSGKCDLAIHSAKDL--PEKPKARVIAITASIDPRDILVFQEKYLLQPFPSR 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG SS RR+AL+ + D RG I+TRL L+ K AI++A A + RL
Sbjct: 136 LRIGCSSDRRRALISSLYPSAVITDIRGTIQTRLALLDQQKFDAIVMANAAVSRLGLRLP 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN 210
+L P P QG + I + +
Sbjct: 196 CTVVLPP---PYHPFQGRLAITSCHH 218
>gi|45644676|gb|AAS73064.1| predicted porphobilinogen deaminase [uncultured marine gamma
proteobacterium EBAC20E09]
Length = 291
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 79/310 (25%), Positives = 128/310 (41%), Gaps = 31/310 (10%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
+I +R S LALA E + II + T+GD I + + K F
Sbjct: 2 TIKIASRSSKLALAQVEEFVKK------FGISDYKIIKVKTEGD-IKSANGETLFDKAHF 54
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+++K L++GE D AVHSAKD P GL +LP + +DV I
Sbjct: 55 VSDVQKCLLNGEADIAVHSAKDTPAGETTGLLRY-FLPSQSNQDVLIFRE---EDKFNSE 110
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+GTSSLRR+ + I++++ G ++TRL KL+ + I+LA AG+ RLK
Sbjct: 111 MKLGTSSLRRQLQAKHHLNAINIVNLSGNVDTRLEKLSQGEYDCIILAKAGLARLKLLNE 170
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELV----KVINHEDTWDSVNCERAFLAEL 240
+ + D+ + GQG +CIE + + +++ ER+ L +
Sbjct: 171 L--QYEVMDWSTASGQGFLCIEVLNDPSADIYNFLLKSIREIDLNLGKNISTERSILEAI 228
Query: 241 DGSCKSAIAGFA----YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ C SAI+ + S L G + E + + +A I
Sbjct: 229 NAGCNSAISIQTQSNLESENSQLIHLGEIYG------VEKYISFSGTNAEKTI----NDI 278
Query: 297 RFISNKNVFN 306
+ + N
Sbjct: 279 KNQDGLKLLN 288
>gi|58699795|ref|ZP_00374427.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58533687|gb|EAL58054.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 199
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 107/202 (52%), Gaps = 6/202 (2%)
Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158
L R D FISH SL+ L + I TS++RRK LL +R D++++ RG + TR
Sbjct: 1 CVLERLSPCDAFISHKHNSLESLPQQATIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR- 59
Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218
L N I+LA AG+ RL+K +I E+L + + GQGAICI+ N+ K +L+
Sbjct: 60 --LQNQSFDGIILAEAGLIRLEKHHLITEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLL 117
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVS 277
+ IN+ ++ V ER+F+ ++GSC + +A A + LY ++ DGK +
Sbjct: 118 EKINNNMSFIGVKSERSFMKTVNGSCFTPLAALAEYVSENMLYLRCMLA--DGKNIYFTE 175
Query: 278 RNGNRCDAINIGRDAAQYIRFI 299
R DA +G DA ++
Sbjct: 176 RTSFIEDAEKMGMDAGLELKSK 197
>gi|209732910|gb|ACI67324.1| Porphobilinogen deaminase [Salmo salar]
Length = 174
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
+ R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K
Sbjct: 17 NRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 74
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119
LFT+E+E L E+D VHS KD+PT L G I A L RE D + H +L
Sbjct: 75 LFTKELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLD 134
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDF 150
L SVIGTSSLRR A L + + D
Sbjct: 135 TLPDGSVIGTSSLRRAAQLKKRFPHLEFKDI 165
>gi|261884538|ref|ZP_06008577.1| porphobilinogen deaminase [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 174
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 75/171 (43%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94
H++ IIP+ TKGD I + L +IGGKGLF++E+E ++ G D AVHS KD+PT G
Sbjct: 5 GHSVEIIPMKTKGDVILDTPLAKIGGKGLFSKELETSMLEGSADIAVHSLKDVPTTFPDG 64
Query: 95 LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154
L+++ RED+RD +S ++L +L + +GT+SLRRK +L R+D+ +I RG +
Sbjct: 65 LKLACVCSREDVRDAMLSMKYKNLDELPQGAKVGTTSLRRKMQILAHRADLDIISLRGNV 124
Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205
+R+ KL N + AI+LA AGI RL + K K L+I P+ GQGA+ I
Sbjct: 125 NSRIAKLKNGEFDAIILAMAGINRLNRSKDDKATLSINTI-PAMGQGALGI 174
>gi|294953467|ref|XP_002787778.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239902802|gb|EER19574.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 45/316 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RIG+R S LA L ++ + + GD L ++
Sbjct: 5 SNATLRIGSRRSDLARLQTLMVADRLEEM----GYEVECEYQEAPGDTNLKDPLWKMPET 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT + +KL+ G +D VHS KD+P G ++A LPR D RD+ I +
Sbjct: 61 GVFTTFLRQKLLEGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIR 120
Query: 122 ALHSV--IGTSSLRRKALLLRWRSD-------ISVIDFRGKIETRLNKLNN--------- 163
A++ + +SS RR+ L + + D RG I+TR+ KL +
Sbjct: 121 AMNGKLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHNASLG 180
Query: 164 NKAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206
+ HA++LA A + R + +L + P + QGA+ +E
Sbjct: 181 PRPHALVLAKAAVDRFAQSHREEFRNSRELVEGYLSKCHCMVLPLSANPTAAAQGALGVE 240
Query: 207 THVNNPKAQ--ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFY 262
+ K ++V +N E T+ + E+ L G C I G +
Sbjct: 241 VSTASEKEHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIGCTVLPRWYGKVEHLR 300
Query: 263 GIVLASDGKIFHEVSR 278
G G
Sbjct: 301 GR--TDGGVDLLRSEI 314
>gi|325526662|gb|EGD04197.1| porphobilinogen deaminase [Burkholderia sp. TJI49]
Length = 141
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF
Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
+E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L
Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMSREDPRDAFVSNDYASLDALPAG 135
Query: 125 SVIGTS 130
+V+GTS
Sbjct: 136 AVVGTS 141
>gi|147899551|ref|NP_001088263.1| hydroxymethylbilane synthase [Xenopus laevis]
gi|54038668|gb|AAH84265.1| LOC495094 protein [Xenopus laevis]
Length = 256
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 90/233 (38%), Gaps = 30/233 (12%)
Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
+ + +L L SVIGTSSLRR A L + + D RG + TRL KL+
Sbjct: 14 HMMPWCFTLKKSGNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLD 73
Query: 163 -NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221
AI+LA AG++R+ E I +IL ++ + GQGA+ +E + +V +
Sbjct: 74 EQEDFSAIVLAAAGLRRMGWENRIGQILTSDECLYAVGQGALAVEVRTKDQDILSMVSAL 133
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV----- 276
+T ERAF+ L+G C +A K LY G V + DG +
Sbjct: 134 QDPETVLRCVAERAFMKRLEGGCSVPVAVSTVVKDLQLYLTGAVYSLDGSDSLKETMQSC 193
Query: 277 ------SRNGNRCD------------------AINIGRDAAQYIRFISNKNVF 305
G D A +G A + K +
Sbjct: 194 VNFLQQEVEGPNDDVQHVGITALGVSQQALESAQCLGTGLADLLLSKGAKEIL 246
>gi|294919063|ref|XP_002778511.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239886970|gb|EER10306.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 45/316 (14%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
RIG+R S LA L ++ + + GD L ++
Sbjct: 5 SNATLRIGSRRSDLARLQTLMVADRLEEM----GYKVECEYQEAPGDTNLKDPLWKMPET 60
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
G+FT + +KL+ G +D VHS KD+P G ++A LPR D RD+ I +
Sbjct: 61 GVFTTFLRQKLLDGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIR 120
Query: 122 ALHSV--IGTSSLRRKALLLRWRSD-------ISVIDFRGKIETRLNKLNN--------- 163
A++ + +SS RR+ L + + D RG I+TR+ KL +
Sbjct: 121 AMNGKLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHDASLG 180
Query: 164 NKAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206
+ HA++LA A + R + +L + P + QGA+ +E
Sbjct: 181 PRPHALVLAKAAVDRFAQSHRGEFRNSRELVQGYLSKCHCMVLPLSANPTAAAQGALGVE 240
Query: 207 THVNNPKAQ--ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFY 262
+ K ++V +N E T+ + E+ L G C I G +
Sbjct: 241 VSTASEKGHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIGCTVLPRWYGKVGHLR 300
Query: 263 GIVLASDGKIFHEVSR 278
G G
Sbjct: 301 GR--TDGGVDLLRSEI 314
>gi|322371455|ref|ZP_08046004.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253]
gi|320548987|gb|EFW90652.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253]
Length = 366
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + R+ TR S LA+ + E +++L D ++ ++ + T GD++ + +TE+
Sbjct: 1 MSNRGTELRLATRGSDLAIRQSGEVKAALEDRR----FSVELVEVETTGDQLDDALITEL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G F ++++++ E+D A+HS KDMPT L ++A R DV ++ + +
Sbjct: 57 GKTGAFVRNLDQEVLDEEVDGAIHSMKDMPTDHPDELVVAAVPERASANDVLVTPDGKPI 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
L +V+GTSSLRRKA LL +R D++V RG ++TR+ KL
Sbjct: 117 DALPDGAVVGTSSLRRKAQLLNFRPDLTVKPLRGNVDTRIEKL 159
Score = 93.3 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 165 KAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ I+LA AG++R V + L + F P+PGQGA+ + T AQ+L V++H
Sbjct: 218 EYDGIVLAEAGLQRSGLAHHVEYDRLPPKQFVPAPGQGALAVMTLDGEL-AQDLHTVLDH 276
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
T ER L EL+G C + I + +G ++ V + DG + R+
Sbjct: 277 PRTRVETTVERTILRELNGGCIAPIGVHSIIQGENVHVEAQVFSQDGSEVISIKRDVPVE 336
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
+ + A+ + +++
Sbjct: 337 THVTGAKKVAEELADRGARDLI 358
>gi|297620494|ref|YP_003708631.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia
chondrophila WSU 86-1044]
gi|297375795|gb|ADI37625.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia
chondrophila WSU 86-1044]
Length = 472
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 9/249 (3%)
Query: 2 EKKPFRIGTRCSPLALAHAFET--RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59
+ R SPL+ A E + L+ P + ++T GDR +L +
Sbjct: 55 STNRITVAARSSPLSEAQVDEILYEAQLIQ----PTLEFEVTLVTTLGDRDQESSLRTLE 110
Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119
FT +I++ L++G AVHSAKD+P + GL I A D D + +L
Sbjct: 111 KTDFFTRDIDQLLLNGYCRIAVHSAKDLPDPIPNGLNIIAVNQGLDPSDSLVMRPGDTLS 170
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
L + I TSS+RR+ + RSD+ V+D RG I RL KLN+ + +++A + + RL
Sbjct: 171 SLPKGAKIATSSIRREKAVHSLRSDLEVVDIRGNIGQRLQKLNDREVDGVIVAESALIRL 230
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
+ + L E +PGQG + + ++ +A ++ + +
Sbjct: 231 NLYHLNRIHLPGE---TAPGQGKLAVVAREDDEEAAVFFSAMDQRPITVYLGLKPPKDTA 287
Query: 240 LDGSCKSAI 248
+ I
Sbjct: 288 IKKFHHCPI 296
>gi|313124929|ref|YP_004035193.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM
11551]
gi|312291294|gb|ADQ65754.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM
11551]
Length = 375
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 4/161 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M++ R+ TR S LAL R +L D ++ ++ + T+GD+I + L +G
Sbjct: 1 MKRGTLRLATRGSDLALRQTASVRDTLADRR----FDVELVEVETRGDQIRDELLHRLGK 56
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F ++++++ E+D AVHS KDMPT+ + L ++ R DV ++ + ++
Sbjct: 57 TGAFVRALDERVLDEEVDAAVHSMKDMPTEHPRDLVVAGVPERAPANDVLLTPDGTAFEN 116
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
L SV+GTSSLRRKA +L R D+ V RG ++TR+ KL
Sbjct: 117 LPAGSVVGTSSLRRKAQILSARPDLEVEPLRGNVDTRVEKL 157
Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Query: 165 KAHAILLAYAGIKRLKKEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ AI+LA AG+KR + L +F P+PGQGAI + ++ + ++
Sbjct: 220 EYDAIVLAEAGLKRSGLLHRVEYDRLPPTEFVPAPGQGAIAVTARRDHENLDRIQDALDD 279
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
T + ER LAEL G C + I A +G ++ VL++DG+ SRN
Sbjct: 280 PRTRVTTTVERTVLAELGGGCIAPIGVHAKLQGEHVHVTARVLSTDGEEEVSASRNLPVH 339
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
+ N + A+ + ++
Sbjct: 340 NHANAAAEFAESLASQGAADLI 361
>gi|226294065|gb|EEH49485.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb18]
Length = 249
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 17/232 (7%)
Query: 92 LKGLQISAYLPREDIRDVFISHTAQSLK---DLALHSVIGTSSLRRKALLLRWRSDISVI 148
+ A +PRED RDV + +L SV+GTSS+RR A L R +
Sbjct: 7 PNPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQ 66
Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAIC 204
D RG IETRL KL+ + I+LA AG+ R + I L+ ++ + GQGA+
Sbjct: 67 DIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARISHFLDSKNGKMLHAVGQGALG 126
Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST------ 258
+E ++ + + +++ I + ER+ L L+G C + +
Sbjct: 127 VEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGGCSAPLGVETEWVKGEGQGEVE 186
Query: 259 -LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306
L IV + DGK EV + +A G+ A+ + +
Sbjct: 187 KLRLRAIVASVDGKEAVEVEMEAEIRSEAEAEWFGKTVAEELIVKGAGKILE 238
>gi|47200553|emb|CAF87716.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72
S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT+E+E L
Sbjct: 1 SQLARIQTDSVAEKLKELY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFTKELENAL 58
Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGT 129
E+D VHS KD+PT L G I A L RE+ D + H ++L L HSVIGT
Sbjct: 59 ERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGT 118
Query: 130 SSLRRKALLLRWRSDISVIDF------------------------RGKIETRLNKLN-NN 164
SSLRR A L + + D RG + TRL KL+
Sbjct: 119 SSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKE 178
Query: 165 KAHAILLAYAGIKRLKKEKV 184
AI+ A AG++R+ +
Sbjct: 179 DFAAIISAAAGLRRMGWDNR 198
>gi|323451311|gb|EGB07188.1| hypothetical protein AURANDRAFT_59094 [Aureococcus anophagefferens]
Length = 331
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 26/319 (8%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL-F 64
+I TR SPLA+ A +L P ++ +S+ G+ N L + F
Sbjct: 18 VKIATRPSPLAVKQAERVAETLRRA--DPALTTELVRISSTGEYRNNTPLPLALDPTVDF 75
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPT---KLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121
T ++ + SG +D AVHS KD+P E D + S+ +
Sbjct: 76 TGLLDDAVGSGAVDVAVHSLKDLPPANRWRGDLRVACHLPRTESAADALV--GYASMDLV 133
Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180
+ +GT+S RR+ALL R D+ V+ RG + RL L+ A++L AG++RL+
Sbjct: 134 PRGARVGTASQRRRALLRCARPDLDVVTVRGNVHARLETLDRGDVDALILGAAGLQRLEL 193
Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240
+ IL+ ++ P+P QG + + +L+ + D + ERA L
Sbjct: 194 LDARRHAILSFDEMLPAPAQGIVGAVARGDGGALGDLLARADDRDARIAATAERAVLDVA 253
Query: 241 DGSC----KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG------- 289
D + + + G+ + DG + + +A +G
Sbjct: 254 DAASPGAGRPPTSAAMTRDGAAWLLRARLTRPDGSRSAATT---STVEADQLGDGDAAAR 310
Query: 290 ---RDAAQYIRFISNKNVF 305
A + + + + F
Sbjct: 311 EFGAAAGRDLLRRAGPDFF 329
>gi|42524803|ref|NP_970183.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100]
gi|39577013|emb|CAE78242.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100]
Length = 502
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 75/288 (26%), Positives = 119/288 (41%), Gaps = 31/288 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
RI R S LA A+ +L + K P I + GD+ L +I KG+FT
Sbjct: 3 LRISARKSDLARLQAYMVGDALKE--KNPQIEIDYRFRESLGDKNLTDPLWKIPEKGVFT 60
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD-VFISHTAQSLKDLALH 124
E+ +L+ E D VHS KD+PT+ I+A LPR D RD + + + +
Sbjct: 61 EDFFGELLRDETDLVVHSWKDLPTEHKSETVIAATLPRADQRDLLLVKKSHFDKIKTSKT 120
Query: 125 SVIGTSSLRRKALLLRWR--------SDISVIDFRGKIETRLNKL-NNNKAHAILLAYAG 175
+ +SS RR+ L + D+ RG + TR+ KL + + +++A A
Sbjct: 121 LKVFSSSPRREYNLTGFFKEHLPFGLQDVKFESVRGNMLTRVRKLIESPETDGLIVAKAA 180
Query: 176 IKRL-----------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218
RL ++ +L + P + QGA+ +E + Q+L+
Sbjct: 181 FDRLFSATLPEFLEGQQQLRQYFNELNWVVLPLSVNPNAAAQGALAVEVLKSRQDLQDLL 240
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFYGI 264
+ I+H DT+ ER L+ G C I A G G+
Sbjct: 241 QSIHHADTFHCSQKERDVLSSFGGGCHQKIGVAVLARPYGQITLLKGL 288
>gi|222480661|ref|YP_002566898.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239]
gi|222453563|gb|ACM57828.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239]
Length = 385
Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M R+ TR S LAL A R +L + ++ + + T+GD+I + + +G
Sbjct: 1 MTD-TLRLATRGSDLALRQAGTVRDALSSRRR----DVELRRVETRGDQIPDEMIHRLGK 55
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
G F ++++++ G+ D AVHS KD+PT+ + + I+ R DV + ++D
Sbjct: 56 TGAFVRALDEEVLGGDADLAVHSLKDVPTEGMDDMVIAGVPERAPSGDVLVHPDGLGIED 115
Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168
L SV+GT SLRR A + R D+ V RG ++TR+ KL A
Sbjct: 116 LPSGSVVGTGSLRRTAQIKAARPDLVVEPLRGNVDTRVEKLLAPDLQA 163
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNI-EDFPPSPGQGAICIETHVNNPKAQEL 217
K+ AI+LA AG++R + + E+F P+ GQGAI + T + +++
Sbjct: 223 RKVETE-YDAIVLAEAGLRRSELFYEVPTTRLPREEFVPAAGQGAIAV-TATDPDVIEDV 280
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
++H T +V ER L EL+G C + I A +G ++ VL++DG +
Sbjct: 281 RSAVDHPRTRVAVTVERTILGELNGGCVAPIGVSALVQGEHVHTRVRVLSTDGTEEVADT 340
Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
R+ + A + +
Sbjct: 341 RDLPIRSHAKAAEEFAADLADRGAAELIE 369
>gi|254380811|ref|ZP_04996177.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1]
gi|194339722|gb|EDX20688.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1]
Length = 231
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 10/223 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
R+GTR SP+AL + P + I+ + ++GDR L+ IGGKG F
Sbjct: 10 TVRLGTRPSPMALEQTGRFADVFRARY--PQVVLDIVEIVSEGDRHRG-PLSTIGGKGAF 66
Query: 65 TEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119
T ++ L+ G + + AKD+P G+ I+A LPRED RD + H +L
Sbjct: 67 TRNADRYLLDGRVQATIACAKDVPGPHDRSPGIVIAAVLPREDTRDALVLPTGHPVTTLA 126
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177
+L + +GTS+ RR ALL + + RG ++RL L+ + A ++ A AG++
Sbjct: 127 ELPPGTRVGTSAPRRSALLKALHPTLVQVPIRGNADSRLRALDAGRLGADVMIAALAGLR 186
Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220
RL E EIL+ + P+ G G + +E ++P L+
Sbjct: 187 RLGHEDRASEILDPAVWLPAAGAGTVIVEHRSDDPATGWLLAP 229
>gi|307254894|ref|ZP_07536716.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306862135|gb|EFM94107.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
Length = 119
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGK
Sbjct: 6 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGK 63
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106
GLF +E+E L+ D AVHS KD+P +GL ++ RED
Sbjct: 64 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDP 108
>gi|306835115|ref|ZP_07468155.1| possible hydroxymethylbilane synthase [Corynebacterium accolens
ATCC 49726]
gi|304568972|gb|EFM44497.1| possible hydroxymethylbilane synthase [Corynebacterium accolens
ATCC 49726]
Length = 158
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208
RG I+TR++K+ + + A++LAYAG+ R E +I + E F P+P QGA+ IE
Sbjct: 1 PLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRASDIFDPELFMPAPAQGALAIEAV 60
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
A L V++ E + ERA LA L+ C + +A + G L G V A
Sbjct: 61 AGTEAAAALDAVVD-EQATAAALAERAVLARLEAGCTAPVAATSRWNGDQLTVRGGVFAL 119
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
DG + +G +A +G + + ++
Sbjct: 120 DGSRQLTATASGTAAEAAELGARVSDELFAQGAADLL 156
>gi|266622116|ref|ZP_06115051.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Clostridium hathewayi DSM 13479]
gi|288866179|gb|EFC98477.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Clostridium hathewayi DSM 13479]
Length = 107
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/109 (48%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K RIGTR S LA+ +L V P I+ T+GDRI N+ L E GGK
Sbjct: 1 MNKTIRIGTRKSALAMVQTELVAEALKQV--QPGLETRIVTKVTEGDRILNKPLLEFGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
G+F E E+ L +GEID AVHSAKD+P L GL I A PRED RDV
Sbjct: 59 GVFVTEFEQALQNGEIDFAVHSAKDLPMDLEDGLGIVAVPPREDPRDVL 107
>gi|257052010|ref|YP_003129843.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940]
gi|256690773|gb|ACV11110.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940]
Length = 373
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + FR+ TR S LAL R +L H + ++ + T GD + + + +
Sbjct: 1 MSSRATTFRLATRGSDLALRQTGAIRDALESRR----HEVELLEVETTGDELRDELIHRL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G F +++++ +GE D AVHS KD+PT+ +GL ++A R DV ++ L
Sbjct: 57 GKTGAFVHSLDERVRAGEADAAVHSLKDVPTEDREGLTVAAVPERAPANDVLVTPDGTDL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
DL + +GTSSLRR+A LL R D+ V RG ++TR+ KL
Sbjct: 117 DDLPEGATVGTSSLRRRAQLLAERPDLDVQPLRGNVDTRVEKL 159
Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 55/143 (38%), Gaps = 2/143 (1%)
Query: 165 KAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ AI+LA AG+ RL + + L E F PSPGQG A+ + +I+
Sbjct: 221 EYDAIVLAEAGLDRLGLTHHLDFQALPDEQFVPSPGQGV-VAVVAEEGEAAEAIRDIIDD 279
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
T ER L L G C + I A +G + VLA DG R
Sbjct: 280 ARTRVEATVERTILETLGGGCVAPIGVRAVFQGRVVTTTVRVLAPDGTEEIADRRALPVE 339
Query: 284 DAINIGRDAAQYIRFISNKNVFN 306
D ++ R+ + + V
Sbjct: 340 DHVDAARELGEDLADRGADEVIE 362
>gi|307719295|ref|YP_003874827.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM
6192]
gi|306533020|gb|ADN02554.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM
6192]
Length = 672
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 12/232 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLS--TKGDRITNRTLTEIGG 60
+ R+GTR S LALA E + D + P+ +GDR L + G
Sbjct: 1 MRVLRLGTRGSRLALAQVREWIARWRDASPEAG-EVEWEPMVLHPRGDRDKRTPLHLVEG 59
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHTAQ--- 116
FT+ +++ L+ G ID A+HSAKD+P +L +GL ++A P E R DV + H
Sbjct: 60 SDFFTDALDEALLEGRIDVALHSAKDLPDELREGLSLAAITPLEGPREDVLVLHPRWASA 119
Query: 117 -SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
S+ +L IGTSS RR+ L RSD ++D RG IE RL ++++ + +++A
Sbjct: 120 SSVDELPAGLRIGTSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAKVA 179
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
+ RL E F P P QG + + + + L V++ W
Sbjct: 180 LTRLALEVPHL----PLPFVPHPLQGRLAAVVREGDEEVRRLCAVLDDRGRW 227
>gi|293194091|ref|ZP_06609931.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces odontolyticus F0309]
gi|292819785|gb|EFF78795.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces odontolyticus F0309]
Length = 177
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI--VIIPLSTKGDRITNRTLTEI 58
M + F +GTR S LALA + ++ + + + + T GD ++ L +
Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRVNLEVVRTHGD-VSAEPLAAL 59
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + +L
Sbjct: 60 GGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAADGATL 119
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174
L +++GT S RR A +L R D+ V D RG + TRL+++ + A A A
Sbjct: 120 ASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGADAGTAPSA 177
>gi|156101752|ref|XP_001616569.1| porphobilinogen deaminase [Plasmodium vivax SaI-1]
gi|148805443|gb|EDL46842.1| porphobilinogen deaminase, putative [Plasmodium vivax]
Length = 341
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 69/329 (20%)
Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106
GD I ++ + GGKG+FT+E++++LI + VHS KD+P +L + +Q+S +L R+ I
Sbjct: 2 GDHILDKKVGLFGGKGIFTKELDEQLIKKNVHICVHSLKDVPMELPEHVQLSCFLKRDTI 61
Query: 107 RDVFISHTAQSLKDLALHSV---------------------------------------I 127
D F+S +L+D+ + I
Sbjct: 62 NDAFLSVKYATLEDMNKRKMANKVEEESDQEKGTIQQMTNQGLKRDNCEGDKCTNFIPTI 121
Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV--- 184
GTSSLRR + + +++V + RG I TR+ KL N + AI++A G++RL +KV
Sbjct: 122 GTSSLRRSSQIKYTYKNVAVKNVRGNINTRIAKLCNGQYDAIIIAKCGLERLLTKKVVRN 181
Query: 185 ---------------------------IKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+ +N P+ QG I + +H N+ +
Sbjct: 182 IIRGKGKVPPEKFLLNHNDMETNLRLLRIQQINRRTIYPALCQGIIAVTSHKNDVDTSNI 241
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277
+K IN E N ER+FL +++G+C I G+A G + F ++ + G+ + V
Sbjct: 242 LKNINDEKAQIMANVERSFLYQIEGNCMMPIGGYAQIVGGEIVFNAVINDTHGREKYHVR 301
Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVFN 306
G + NI AA ++ + FN
Sbjct: 302 EVGTVQNCNNIAAMAATKMKEKIGTHRFN 330
>gi|55379657|ref|YP_137507.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049]
gi|55232382|gb|AAV47801.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049]
Length = 389
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 6/163 (3%)
Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58
M + ++ TR S LAL A R SL + ++ + T GD+I + + +
Sbjct: 1 MTTRGETLQLATRGSDLALRQAATVRDSLSSRR----LAVELVEVETTGDQIRDELIHRL 56
Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118
G G F +++K++ GE+D AVHS KDMPT+ + L ++A R DV ++ +SL
Sbjct: 57 GKTGAFVRSLDEKVLDGELDAAVHSMKDMPTERPERLVVAAVPERAAAEDVLVTPDGRSL 116
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
++L + +GTSSLRRKA LL R D++V RG ++TRL KL
Sbjct: 117 EELPEGATVGTSSLRRKAQLLAERDDLTVEPLRGNVDTRLAKL 159
Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 165 KAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ AI+LA AG+ R V L+ + F P+PGQGA+ + T V+ A ++ ++
Sbjct: 226 EYDAIVLAKAGLHRAGLTRYVGMSDLDPDQFVPAPGQGALAV-TAVDGDLALDIKDRLDD 284
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
T ER L EL G C + I A +G ++ VL+ DG V R+
Sbjct: 285 PQTRIETTVERTILEELGGGCVAPIGVHAQLEGGVVHTRVRVLSQDGTEEVSVGRDVPAE 344
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
I +D A + ++
Sbjct: 345 YHIESAQDLAAELAEQGADDLI 366
>gi|46445906|ref|YP_007271.1| porphobilinogen deaminase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399547|emb|CAF22996.1| putative Porphobilinogen deaminase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 233
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
+G R SPL+ A E +L + P I T GD +L ++ FT
Sbjct: 18 ISVGARSSPLSRAQVQEILKALRSFY--PSIEFTISYFDTIGDLDQKTSLRDLDKTNFFT 75
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+EI++ ++ + +HSAKD+P + GLQ+ D DV + ++L+ L HS
Sbjct: 76 KEIDEAILQKKCQIGIHSAKDLPDPIPDGLQLICLTKGVDCSDVLVLRDGETLQTLPPHS 135
Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
I TSS+RR+ ++ R+D +D RG I RL L +A +++A A + RL +
Sbjct: 136 RIATSSIRRENIVKLLRNDFIFLDLRGTIHQRLALLEKKQADGVVVAEAALIRLGLTHLN 195
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+ L GQG + I ++ K Q L ++
Sbjct: 196 RIRLPGTTV---EGQGQLAIIARKDDAKMQTLFACLD 229
>gi|149041456|gb|EDL95297.1| hydroxymethylbilane synthase, isoform CRA_c [Rattus norvegicus]
Length = 208
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 17 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHP 127
>gi|149041455|gb|EDL95296.1| hydroxymethylbilane synthase, isoform CRA_b [Rattus norvegicus]
Length = 192
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ R+GTR S LA + L ++ P II +ST GD+I + L++IG K
Sbjct: 1 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114
LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H
Sbjct: 59 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHP 111
>gi|297170589|gb|ADI21615.1| porphobilinogen deaminase [uncultured myxobacterium HF0130_06F04]
Length = 197
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175
L L + +GTSSLRRKA LL R D+ ++D RG + TR NK + + A++LA AG
Sbjct: 4 NQLWGLKEKARVGTSSLRRKAHLLSKRPDLVMVDIRGNVPTRFNKAVSGELDAVILAEAG 63
Query: 176 IKRLKKEKVIKEI------LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+ RL+ K + +++ P+P QGA+ I+T ++ +A +K ++H T
Sbjct: 64 LTRLEMGKQAENQGVRLVPIDVASVCPAPAQGALAIQTRSDDERAHAALKALHHPGTAAC 123
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
V ER L E G C + + +V + DG E G +
Sbjct: 124 VEVERLLLGEFGGGCHLPLGAHCTVENGEYTLVALVASPDGGERFEARSTG--NHPNEVA 181
Query: 290 RDAAQYIRFISNKNVF 305
+ +
Sbjct: 182 KQVHLELVRQGADAYL 197
>gi|322694171|gb|EFY86008.1| porphobilinogen deaminase Hem3, putative [Metarhizium acridum CQMa
102]
Length = 654
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 14/220 (6%)
Query: 100 YLPREDIRDVFISHT---AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156
R+D RD + SL+ L +V+GTSS+R A L R + + RG ++T
Sbjct: 117 IPLRDDPRDALVVKAGLAYTSLQTLPPGAVVGTSSVRHSAQLRRLYPHLRFSNLRGNVDT 176
Query: 157 RLNKLNNNKAH--AILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNP 212
RL K+ + ++ ++++ AG++R+ + I + L +D + GQGA+ +E +
Sbjct: 177 RLAKVEDPESEYTCMIMSAAGLERVGLKSRISQYLGSKDGGILHAVGQGALGLEIRKGDS 236
Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST----LYFYGIVLAS 268
K + V + + + ERA L L+G C I G + L IV++
Sbjct: 237 KTLQFVNQLGDRKSTLASLAERALLRALEGGCSVPIGVETEWIGQSEHQVLRMKAIVVSL 296
Query: 269 DGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVF 305
DG E S + A +GRD A + + +
Sbjct: 297 DGTECVERSIDAMLLTNDQASQLGRDLAARLIDGGAEKIL 336
>gi|212550635|ref|YP_002308952.1| hydroxymethylbilane synthase/uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548873|dbj|BAG83541.1| hydroxymethylbilane synthase/uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 682
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG- 60
K R+ +R SPL+L E P + +I + + GD+ + L +I
Sbjct: 7 SKGNLRVISRNSPLSLLQVKEV------FSFFPNIDYQLITIESFGDKNKHVALFDISNV 60
Query: 61 ----------KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
FT E+++ LI + D AVHSAKD+P L L++ A D D
Sbjct: 61 SSFFLEEESISDFFTRELDEALIYNKADIAVHSAKDLPYPLPYDLELFALFQAMDKSDSL 120
Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170
IS +L+ L + +GTSS +RK LL+ R D+ V+ RG IE R+ K++N A++
Sbjct: 121 ISRNNLTLEQLPPRARVGTSSQKRKTELLKIRPDLEVVSIRGNIEERIAKMDNGFIDALI 180
Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219
+A + RL E I IL E QG + I N+ + L
Sbjct: 181 VATCALIRLGMEARIACILPFE---THSLQGNLAIVGRKNDKNVKNLFC 226
>gi|238488537|ref|XP_002375506.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357]
gi|220697894|gb|EED54234.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357]
Length = 230
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 16/228 (7%)
Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146
MPT L +++A PR+D RD I L SL A+L R +
Sbjct: 1 MPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSLK--------SLPEGAVLRRLYPHLR 52
Query: 147 VIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGA 202
+ RG +ETRL K++N+ + ++++ AG++R+ E I + L +D + GQGA
Sbjct: 53 FANLRGNVETRLAKVDNSDSEYTCMVMSAAGLERVGLEHRISQYLGSKDGGILHAVGQGA 112
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYF 261
+ +E + K QEL+ + + + + ER+ + L+G C + I + L
Sbjct: 113 LGLEIRKGDRKMQELLGQLADQRSTLACLAERSLMRTLEGGCSAPIGVETEWISAGALSI 172
Query: 262 YGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVFN 306
+ IV++ DG E + N +A +G++ A + V N
Sbjct: 173 HAIVVSLDGTKSVEDTIVSNVKTVEEATALGKELAARLVKAGAGEVLN 220
>gi|62999515|gb|AAY25186.1| putative porphobilinogen deaminase [Streptomyces nodosus subsp.
asukaensis]
Length = 167
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 8/160 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62
KP R+GTR S LA+A + ++ +V + ++ ++T GD I+ L +IGG G
Sbjct: 12 DKPLRLGTRRSKLAMAQSGMVADAVSEVT---GRAVELVEVTTYGD-ISREHLAQIGGTG 67
Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122
+F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ + + L
Sbjct: 68 VFVAALRDALLRGEVDFAVHSLKDLPTAQPEGLVLAAVPVREDPRDVLVARDGLTFEQLP 127
Query: 123 LHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRL 158
+ IGT S RR A L + DI + RG ++TR+
Sbjct: 128 SGARIGTGSPRRMAQLNAYARNHGLDIETVPIRGNVDTRI 167
>gi|255348660|ref|ZP_05380667.1| porphobilinogen deaminase [Chlamydia trachomatis 70]
gi|255503200|ref|ZP_05381590.1| porphobilinogen deaminase [Chlamydia trachomatis 70s]
gi|296434889|gb|ADH17067.1| porphobilinogen deaminase [Chlamydia trachomatis E/150]
gi|296438609|gb|ADH20762.1| porphobilinogen deaminase [Chlamydia trachomatis E/11023]
Length = 241
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 7/206 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+ +R S LA+ A E L P II +T+GD L + G F
Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQ--IFFPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T++++ + SG+ D +HSAKD+ + + D RD+ + H L
Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDL--PENPKATVISITASIDPRDILVFHEKYLSIPLPRR 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG+SS+RRK LL + D RG I+TRL L AI++A A + RL
Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN 210
+IL P P QG + I +
Sbjct: 196 CTKILPP---PYHPLQGRLAITASRH 218
>gi|297521378|ref|ZP_06939764.1| porphobilinogen deaminase [Escherichia coli OP50]
Length = 92
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93
KGLF +E+E L+ D AVHS KD+P + +
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 91
>gi|15605020|ref|NP_219804.1| porphobilinogen deaminase [Chlamydia trachomatis D/UW-3/CX]
gi|76789021|ref|YP_328107.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13]
gi|255311101|ref|ZP_05353671.1| porphobilinogen deaminase [Chlamydia trachomatis 6276]
gi|255317402|ref|ZP_05358648.1| porphobilinogen deaminase [Chlamydia trachomatis 6276s]
gi|255506878|ref|ZP_05382517.1| porphobilinogen deaminase [Chlamydia trachomatis D(s)2923]
gi|301335770|ref|ZP_07224014.1| porphobilinogen deaminase [Chlamydia trachomatis L2tet1]
gi|11386778|sp|O84301|HEM3_CHLTR RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|3328714|gb|AAC67892.1| Porphobilinogen Deaminase [Chlamydia trachomatis D/UW-3/CX]
gi|76167551|gb|AAX50559.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13]
gi|296435816|gb|ADH17990.1| porphobilinogen deaminase [Chlamydia trachomatis G/9768]
gi|296436741|gb|ADH18911.1| porphobilinogen deaminase [Chlamydia trachomatis G/11222]
gi|296437676|gb|ADH19837.1| porphobilinogen deaminase [Chlamydia trachomatis G/11074]
gi|297140175|gb|ADH96933.1| porphobilinogen deaminase [Chlamydia trachomatis G/9301]
gi|297748428|gb|ADI50974.1| Porphobilinogen deaminase [Chlamydia trachomatis D-EC]
gi|297749308|gb|ADI51986.1| Porphobilinogen deaminase [Chlamydia trachomatis D-LC]
Length = 241
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 7/206 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P R+ +R S LA+ A E L P II +T+GD L + G F
Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQ--IFFPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T++++ + SG+ D +HSAKD+ + + D RD+ + H L
Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDL--PENPKATVVSITASIDPRDILVFHEKYLSIPLPRR 135
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
IG+SS+RRK LL + D RG I+TRL L AI++A A + RL
Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195
Query: 185 IKEILNIEDFPPSPGQGAICIETHVN 210
+IL P P QG + I +
Sbjct: 196 CTKILPP---PYHPLQGRLAITASRH 218
>gi|322782664|gb|EFZ10527.1| hypothetical protein SINV_04722 [Solenopsis invicta]
Length = 331
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIG 128
L + + A+ + RED RD + ++L L SVIG
Sbjct: 14 LCCAYVMLCISCARPLKAC-SLFYNSINTKLREDPRDAVVMSKKFKDKTLSSLPKGSVIG 72
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIK 186
TSSLRR A L R + + + RG + TRL KL+ N AI+LA AG+KR+ E I
Sbjct: 73 TSSLRRSAQLSRNMPHLKIENIRGNLNTRLKKLDDENGPYAAIILAAAGLKRMGWEDRIS 132
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
++L E+ + GQGA+ +E ++ + + L++ + +T CER+FL L G C +
Sbjct: 133 QLLEPEEALYAVGQGALGVECRQSDWEIRSLLEPLFDLETTLRCVCERSFLKTLGGGCSA 192
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282
+A + K + L G V + DG+ +
Sbjct: 193 PVAVSSSLKENELTITGAVWSLDGQTLITDTIKKKL 228
>gi|41186|emb|CAA47279.1| hydroxymethylbilane synthase [Escherichia coli K-12]
Length = 89
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG
Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
KGLF +E+E L+ D AVHS KD+P +
Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEF 89
>gi|3172401|gb|AAC18584.1| porphobilinogen deaminase [Lysinibacillus sphaericus]
Length = 109
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63
+ +G+R S LAL + L P + + TKGD+I + L+++GGKGL
Sbjct: 3 RKIIVGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 60
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111
F +EIE+ L EID AVHS KDMP L +GL I PRED RD FI
Sbjct: 61 FVKEIEQALFDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFI 108
>gi|154762311|gb|ABS86004.1| porphobilinogen deaminase [Cervus elaphus]
gi|155494266|gb|ABS86002.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494267|gb|ABS86003.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494268|gb|ABS86005.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494269|gb|ABS86006.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494270|gb|ABS86007.2| porphobilinogen deaminase [Cervus elaphus]
gi|155494271|gb|ABS86008.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494272|gb|ABS86009.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494273|gb|ABS86010.2| porphobilinogen deaminase [Cervus elaphus canadensis]
gi|155494274|gb|ABS86011.2| porphobilinogen deaminase [Cervus elaphus canadensis]
Length = 195
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E
Sbjct: 1 RGNLNTRLQKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
+ +LV V++ +T ER+FL L+G C +A K LY G V + +
Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTTIKDGQLYLTGGVWSLN 120
Query: 270 GKIFHEVSR-----------NGNRCD------------------AINIGRDAAQYIRFIS 300
G + + +G D A N+G A +
Sbjct: 121 GAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITARNIPRQPQLAAENLGISLATLLLNKG 180
Query: 301 NKNVFN 306
KN+ +
Sbjct: 181 AKNILD 186
>gi|330444348|ref|YP_004377334.1| Porphobilinogen deaminase, dipyromethane cofactor binding
domain-containing protein [Chlamydophila pecorum E58]
gi|328807458|gb|AEB41631.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Chlamydophila pecorum E58]
Length = 237
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P +I +R S LA A E L P ++I T+GDR L I F
Sbjct: 19 PLKIASRDSNLAKAQVNECLQLLR--TSYPKLQSLLITTKTQGDRDKLTPLHTIENSDFF 76
Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124
T +++ + G A+HSAKD+PT L + A D+ + + + +
Sbjct: 77 TRDVDALVCQGSCHIAIHSAKDLPTP--SPLPLVALTRCLHPADLLVYADHYTKEPFPSN 134
Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184
+G+SS+RR +L + +++ RG IE RL +L+NN A++LA A RL +
Sbjct: 135 PRLGSSSMRRGEVLKQLFPLGQILNIRGTIEERLQQLHNNTYDAVVLAKAAALRLGLSFL 194
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
E+L P P QG + + + + + + I+
Sbjct: 195 YSELLPP---PYHPLQGRLALTAYESIDLWRTFLSPIHD 230
>gi|295670329|ref|XP_002795712.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01]
gi|226284797|gb|EEH40363.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01]
Length = 216
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177
+L SV+GTSS+RR A L R + D RG IETRL KL+ + I+LA AG+
Sbjct: 5 ELPAGSVVGTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAAGLL 64
Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
R + I L+ ++ + GQGA+ +E ++ + + +++ I + ER+
Sbjct: 65 RSGQGARISHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLAERS 124
Query: 236 FLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHEVSRNGNRC---DA 285
L L+G C + + L IV + DGK E +A
Sbjct: 125 LLRALEGGCSAPLGVETEWVKGEGEGEVDKLRLRAIVASVDGKEAVEAEMEAEIRSEVEA 184
Query: 286 INIGRDAAQYIRFISNKNVFN 306
G+ A+ + +
Sbjct: 185 EGFGKTVAEELIVKGAGKILE 205
>gi|154762327|gb|ABS86012.1| porphobilinogen deaminase [Capra hircus]
gi|154762329|gb|ABS86013.1| porphobilinogen deaminase [Capra hircus]
Length = 195
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209
RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E
Sbjct: 1 RGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
+ +LV V++ +T ER+FL L+G C +A K LY G V + +
Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLN 120
Query: 270 GKIFHEVSR-----------NGNRCD------------------AINIGRDAAQYIRFIS 300
G + + +G D A N+G A +
Sbjct: 121 GAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITARNIPRQPQLAAENLGISLATLLLNKG 180
Query: 301 NKNVFN 306
KN+ +
Sbjct: 181 AKNILD 186
>gi|25010019|gb|AAN71175.1| GH12864p [Drosophila melanogaster]
Length = 558
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Query: 99 AYLPREDIRDVFISHTAQSLKDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155
A L RED RD + + SVIGTSSLRR A + R ++V D RG +
Sbjct: 5 AVLEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLN 64
Query: 156 TRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213
TRL KL+ ++K I+LA AG+ R+ I ++L D + GQGA+ +E N+ +
Sbjct: 65 TRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQ 124
Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGI 264
+++ + +T + ER+FL L G C + +A ++ KG L G
Sbjct: 125 VLAMLQKLMCLNTTCRILAERSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGA 184
Query: 265 VLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
V + DG I + G R +
Sbjct: 185 VWSLDGAIEIRNHLACALNEQKLEGDQ-----RKRGAQE 218
>gi|282892112|ref|ZP_06300587.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498007|gb|EFB40351.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 221
Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL--STKGDRITNRTLTEIGGKGLFTE 66
R SPL+ A E + +L H + I +IP+ +T GD+ +L + FT+
Sbjct: 2 AARESPLSKAQVLEVQQALHPHHPM----IELIPVWVATTGDKQQEISLRNMEKTDFFTK 57
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
E++ L+SG+ D AVHSAKD+P L +GL + A D RDV + SL L ++
Sbjct: 58 ELDALLLSGQCDVAVHSAKDLPDPLPQGLSLIALTEGVDNRDVLVIREGLSLAALPQAAM 117
Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186
I TSS RR+ R+D +D RG I RL+ L A I++A A + RL + +
Sbjct: 118 IATSSERREQQARMLRTDFRFMDLRGTIGQRLSLLEAGVADGIIVAEAALIRLGLCHLNR 177
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
L E +P QG + I + + +E+ ++
Sbjct: 178 VYLPGE---TAPMQGRLAILAKTEHVEMREIFACLD 210
>gi|294885317|ref|XP_002771270.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239874766|gb|EER03086.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 556
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 68/297 (22%), Positives = 110/297 (37%), Gaps = 42/297 (14%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LA L D + GD L ++ G+FT
Sbjct: 10 LHIGSRRSDLARLQTLMIADLLQDEM---GVKVECHYREAPGDTNLKDPLWKMPETGVFT 66
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ L++G D VHS KD+P G + A LPR D RD+ + + +
Sbjct: 67 SFLRDGLMNGAFDLVVHSWKDLPLAEESGTTVVATLPRADPRDLLLIRRDAIEEMTSEGG 126
Query: 126 V--IGTSSLRRKALLLRW-------RSDISVIDFRGKIETRLNKLNN---------NKAH 167
+ +SS RR+ L + + + D RG I+TR+ KL + + H
Sbjct: 127 KLIVLSSSPRRQFNLTPFLESVVPGVTSVQFRDVRGNIQTRMKKLMDPTIHDESLGCRPH 186
Query: 168 AILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIETHVN 210
+++A A + R + +L + P + QGA+ IE
Sbjct: 187 GLVVAKAAVDRFIRSTREEFKESRQLVQGYISECRCMVLPLSANPTAAAQGALGIEVSTA 246
Query: 211 NPKAQ--ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYG 263
K ++V+ +N T+D+ + E+ L G C I G L+ G
Sbjct: 247 PEKEHVRKIVRSLNDRSTFDAASKEKELLNSYGGGCHQKIGCTILPRQYGDVLFLCG 303
>gi|110669321|ref|YP_659132.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Haloquadratum walsbyi DSM 16790]
gi|109627068|emb|CAJ53547.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Haloquadratum walsbyi DSM 16790]
Length = 394
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 1 MEKK-----PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL 55
M + + TR S LAL A + +L D + + +I + T+GD+I + +
Sbjct: 1 MTTRSRTRGTLTLATRGSDLALKQATSVQEALTDER----YEVDLIEVETRGDQIQDELI 56
Query: 56 TEIGGKGLFTEEIEKKLIS--GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113
++G G F ++KK++ E D AVHS KDMPT L ++ R D+ I+
Sbjct: 57 HQLGKTGAFVRALDKKVLDPTAEADAAVHSMKDMPTDSPDDLVVAGIPQRAPPGDLLITT 116
Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161
Q L DL + IGTSSLRR+A LL R+DI+V RG I+TR+ KL
Sbjct: 117 DGQRLSDLPSGATIGTSSLRRQAQLLDQRTDITVEPLRGNIDTRIEKL 164
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 1/142 (0%)
Query: 165 KAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ AI+LA AG++R + L+ F P+PGQGAI I T ++ + I+H
Sbjct: 235 EYDAIVLAEAGLQRSGLIHHIEYVQLDTTTFVPAPGQGAIAITTQGEANATAQIREAIDH 294
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
T ER LAEL G C + I A +G ++ V ASDG + SRN
Sbjct: 295 PRTRVETTVERTVLAELGGGCIAPIGVHATLQGEYVHVAAQVFASDGTETVDGSRNLPVD 354
Query: 284 DAINIGRDAAQYIRFISNKNVF 305
+ A + +
Sbjct: 355 AHADAAAQFANKLADRGADELI 376
>gi|297170259|gb|ADI21296.1| porphobilinogen deaminase [uncultured gamma proteobacterium
HF0010_09F21]
Length = 282
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 22/283 (7%)
Query: 36 HNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95
+ VI + TKGD+ + + T+ K F ++IE+K+ SG+ID AVHSAKD+P K
Sbjct: 7 EDYVIEKIVTKGDKESAKGRTQF-DKLNFVQDIEEKISSGDIDIAVHSAKDLPATESKEF 65
Query: 96 QISAYLPREDIRDVF----ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151
+ + I ++ K + ++GTSSLRRK +
Sbjct: 66 DYFYLRESTEDISTWSSDRIIFRDKNKKKFSSEMILGTSSLRRKMQAKFLLGAEKIFSLN 125
Query: 152 GKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET---H 208
G I+TR+ KLN+ + I+LA AG RL + DF QG IC++
Sbjct: 126 GNIDTRIRKLNSGEYDCIILANAGCTRLGFNLNSYNL----DFLTPSAQGLICLQCLKGT 181
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA----YCKGSTLYFYGI 264
+ ++ ++ ++FL ++ C SAI+ +
Sbjct: 182 DISKMLNNFFDKDKYKIHKLGMDIYKSFLRNINADCNSAISVRSVGNGRIANGEHKLTFQ 241
Query: 265 VLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
V GK F + D + A + + K + +
Sbjct: 242 VF---GKNEFFSAEKT--HSDPQKLIELATEEFNRNNAKKLLD 279
>gi|289525338|emb|CBJ14814.1| porphobilinogen deaminase [Chlamydia trachomatis Sweden2]
Length = 219
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 7/202 (3%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
+R S LA+ A E L P II +T+GD L + G FT+++
Sbjct: 2 ASRQSSLAVLQAHECLRKLQ--IFFPRLWGQIITTTTQGDLDQETPLCAVENTGFFTDDV 59
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ + SG+ D +HSAKD+ + + D RD+ + H L IG
Sbjct: 60 DFLVQSGQCDLGIHSAKDL--PENPKATVISITASIDPRDILVFHEKYLSIPLPRRLRIG 117
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
+SS+RRK LL + D RG I+TRL L AI++A A + RL +I
Sbjct: 118 SSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLPCTKI 177
Query: 189 LNIEDFPPSPGQGAICIETHVN 210
L P P QG + I +
Sbjct: 178 LPP---PYHPLQGRLAITASRH 196
>gi|166154510|ref|YP_001654628.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu]
gi|166155385|ref|YP_001653640.1| porphobilinogen deaminase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237802722|ref|YP_002887916.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT]
gi|237804644|ref|YP_002888798.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT]
gi|165930498|emb|CAP03991.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu]
gi|165931373|emb|CAP06945.1| porphobilinogen deaminase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231272944|emb|CAX09855.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273956|emb|CAX10748.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT]
Length = 219
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 7/202 (3%)
Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68
+R S LA+ A E L P II +T+GD L + G FT+++
Sbjct: 2 ASRQSSLAVLQAHECLRKLQ--IFFPRLWGQIITTTTQGDLDQETPLCAVENTGFFTDDV 59
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
+ + SG+ D +HSAKD+ + + D RD+ + H L IG
Sbjct: 60 DFLVQSGQCDLGIHSAKDL--PENPKATVVSITASIDPRDILVFHEKYLSIPLPRRLRIG 117
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
+SS+RRK LL + D RG I+TRL L AI++A A + RL +I
Sbjct: 118 SSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLPCTKI 177
Query: 189 LNIEDFPPSPGQGAICIETHVN 210
L P P QG + I +
Sbjct: 178 LPP---PYHPLQGRLAITASRH 196
>gi|218513448|ref|ZP_03510288.1| porphobilinogen deaminase [Rhizobium etli 8C-3]
Length = 137
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 63/137 (45%), Positives = 94/137 (68%)
Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215
TRL KL + A LLA AG+KRL K +V+ +IL+ + FPP+P QGAICIE+ + + +
Sbjct: 1 TRLRKLEEGQVDATLLALAGLKRLGKVEVLTDILDPDTFPPAPAQGAICIESRIGDSRID 60
Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275
+L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G + F G+++ DG+ H
Sbjct: 61 DLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHA 120
Query: 276 VSRNGNRCDAINIGRDA 292
V+ +G+R DA +G A
Sbjct: 121 VTTDGHRRDAAALGTRA 137
>gi|262277145|ref|ZP_06054938.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane
synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha
proteobacterium HIMB114]
gi|262224248|gb|EEY74707.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane
synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha
proteobacterium HIMB114]
Length = 492
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 83/293 (28%), Positives = 120/293 (40%), Gaps = 31/293 (10%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65
IG+R S LA F + L K STKGD+ + G G+FT
Sbjct: 5 LIIGSRASFLAKIQTFIVKQELKKKIKNIKITTKYH--STKGDKNQGHMPWKNLGYGIFT 62
Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125
+ +LI+ +C VHS KD+P K + R+D RDV +
Sbjct: 63 TSLTNELINKNFNCVVHSYKDLPVLKSKTDYY--VITRDDPRDV---LLVKKKCLNKKKF 117
Query: 126 VIGTSSLRRKALLLRWRS-----DISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179
++GTSS RRK+ + + DI RG + TRL K+ + N+ A+ +A A I R+
Sbjct: 118 IVGTSSPRRKSSVKDLKDLTGIKDIKTKTIRGNVTTRLLKVISKNQYDAVFMAKAAIDRI 177
Query: 180 K-----------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222
+K IL + FP + QGAI +E N+ K + + IN
Sbjct: 178 FKYGNKVDKVETKKFLNLFKKFKPFILPLSIFPTAASQGAIAVEYLKNDKKTKSTLNKIN 237
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFH 274
+ T N ER+ L + G C I K + F V A + K FH
Sbjct: 238 CKKTLSICNQERSLLKKYGGGCGLDIGITIEEIKNNNFLFSKGVDARNKKEFH 290
>gi|255030292|ref|ZP_05302243.1| porphobilinogen deaminase [Listeria monocytogenes LO28]
Length = 84
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK
Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58
Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDM 87
GLF E+E+ L ID AVHS KD+
Sbjct: 59 GLFVSEVEQALSDEAIDFAVHSMKDV 84
>gi|260829671|ref|XP_002609785.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae]
gi|229295147|gb|EEN65795.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae]
Length = 140
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76
+ +SL + + II +ST GD+I + L++IG K LFT+E+EK L G
Sbjct: 1 MIQTNSVVASLKKLCD--DVDFEIISMSTTGDKILDTALSKIGEKSLFTKELEKALDDGR 58
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLR 133
+D VHS KD+ + L + I A L RED D + H + L DL +SVIGTSS+R
Sbjct: 59 VDFVVHSLKDLQSTLPPNMVIGAVLEREDPYDAVLMHPKHATKCLADLPENSVIGTSSVR 118
Query: 134 RKALLLRWRSD 144
R A L R
Sbjct: 119 RVAQLKRKYPH 129
>gi|70933882|ref|XP_738249.1| porphobilinogen deaminase [Plasmodium chabaudi chabaudi]
gi|56514312|emb|CAH88223.1| porphobilinogen deaminase, putative [Plasmodium chabaudi chabaudi]
Length = 144
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60
K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ GG
Sbjct: 23 NKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINQNINVILKPIKTTGDKILDKTVGSFGG 82
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120
KG+FT+E++ +LI +D VHS KD+PT L + +S +L R+ I D F+S +SL D
Sbjct: 83 KGIFTKELDDELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLHD 142
Query: 121 LA 122
+
Sbjct: 143 IN 144
>gi|729693|sp|P40129|HEM3_ERWCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|41671|emb|CAA44890.1| hemC [Erwinia chrysanthemi]
Length = 89
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M RI TR SPLAL A + L H P + ++P+ T+G + + L ++GG
Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGXLLLDTPLAKVGG 58
Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91
KGLF +E+E L+ D AVHS KD+P +
Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEF 89
>gi|225020272|ref|ZP_03709464.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii
ATCC 33806]
gi|224947016|gb|EEG28225.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii
ATCC 33806]
Length = 152
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217
+ K+++ + A++LAYAG+ R+ + E+ + +F P+P QGA+ +E ++
Sbjct: 1 MAKVHDGELDAVVLAYAGLSRVHRADEATEVFDPLEFLPAPAQGALAVECRADDADTIAA 60
Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEV 276
+ I + + ER LA L+ C + +A +A + + + V+A DG
Sbjct: 61 ITTIADSKAYACAHTERVVLARLEAGCTAPVAAYATVAADNIMTLHAAVIAMDGSATLRA 120
Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVF 305
+ G A N+G A+ + ++
Sbjct: 121 TAAGPIDTAENLGMTVARALLDDGASSLL 149
>gi|253787595|dbj|BAH84857.1| putative porphobilinogen deaminase [Cucumis sativus]
Length = 188
Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126
EI+ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A S +L S+
Sbjct: 1 EIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSI 60
Query: 127 IGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185
IGT+SLRRK+ L R+ S + +FRG ++TRL KLN A LLA AG++RL + +
Sbjct: 61 IGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENV 120
Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245
IL+I++ P+ QGAI I ++ + +NHE+T +V CERAFL LDGSC+
Sbjct: 121 TSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSCR 180
Query: 246 SAIAG 250
+ IAG
Sbjct: 181 TPIAG 185
>gi|300726136|ref|ZP_07059593.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Prevotella bryantii B14]
gi|299776606|gb|EFI73159.1| porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Prevotella bryantii B14]
Length = 226
Score = 97.5 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK-GL 63
P R+ R S L+ E + L I+ T GD+ + +L +
Sbjct: 9 PIRVIARRSKLSQLQVAEVFNRLK------DIPYTIVFTDTFGDKRLDLSLLNGEAPDDM 62
Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123
FT E++ L+ + D A+HSAKD+P L L++ A D D +S L DL
Sbjct: 63 FTRELDWALLHDDADIAIHSAKDLPEHLHPDLEVIALYEAFDKTDALVSRDHIKLMDLPA 122
Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183
S +GTSS RK L R D+ ++ RG IE R+ ++ + K ++A +KRL E
Sbjct: 123 GSTVGTSSPLRKKGLSELRPDLKIVGIRGCIEDRVAQVRDGKLDCAIVATCALKRLGMED 182
Query: 184 VIKEILNIEDFPPSPGQGAICIET 207
I EIL FP P QG + I
Sbjct: 183 EITEILP---FPTHPMQGRLAITA 203
>gi|54310581|ref|YP_131601.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9]
gi|46915024|emb|CAG21799.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9]
Length = 104
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268
+++ + + L+ +NH +T + CERA L G C+ I ++ +G ++ +V
Sbjct: 1 MDDQRVRALLAPLNHHETATRIFCERAMNNRLQGGCQVPIGSYSELQGDQIWLRALVGEP 60
Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
DG G D +G A+ + K + +
Sbjct: 61 DGSKMVRGEITGPAIDGEALGTQLAEQLLADGAKEILD 98
>gi|294637951|ref|ZP_06716219.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685]
gi|291088912|gb|EFE21473.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685]
Length = 94
Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 38/87 (43%)
Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279
+NHE T V+ ERA L+G C+ I +A G L+ +V DG + R
Sbjct: 1 PLNHESTALRVSAERAMNMRLEGGCQVPIGSYAEIDGDQLWLRALVGRPDGSLIIRGERR 60
Query: 280 GNRCDAINIGRDAAQYIRFISNKNVFN 306
G A ++G D A + + + +
Sbjct: 61 GPLHQAESMGIDLADELLARGARAILD 87
>gi|330937205|gb|EGH41226.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 119
Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
GQGA+ IE + + L+ ++HEDT V ER+ L+G C+ IA +A +G
Sbjct: 3 GQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGCQVPIACYAVLEGDD 62
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
++ G+V G + + A +G A+ + ++
Sbjct: 63 VWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQGAADIL 109
>gi|327493887|gb|AEA86530.1| porphobilinogen deaminase [Euglena gracilis]
Length = 210
Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 12/179 (6%)
Query: 140 RWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRLKKEKVIKEI---LNIEDF 194
+ D RG ++TRL KL + + A++LA +G++RL + E+ + F
Sbjct: 1 HQFPHLLFKDVRGNVQTRLAKLEDPTHGYAALVLAVSGLERLALGHHVTEVLASTDRRWF 60
Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254
+ GQGA+ ++ + ++ ++H++T ERA + EL+G C + IA
Sbjct: 61 GYAVGQGALTVQCREGDAGTLRYLQHLHHQETAQRCIAERALMRELEGGCHAPIAVETRT 120
Query: 255 KGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR-FISNKNVFN 306
L + + DG+ + +A +GR A+ IR + +
Sbjct: 121 FTEPGQPEPQLCLTAALYSLDGRQCVQRRLCQPAVEAEALGRAVAKAIREADGAAAILD 179
>gi|315186776|gb|EFU20534.1| uroporphyrin-III C-methyltransferase [Spirochaeta thermophila DSM
6578]
Length = 661
Score = 93.7 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 15 LALAHAFETRSSLMDVHKIPP-HNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73
LALA E + D + L +GDR L + G FT+ +++ L+
Sbjct: 2 LALAQVREWIARWRDASPEAGEVKWEPVVLHPRGDRDKRTPLHLVEGSDFFTDALDEALL 61
Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHTAQ----SLKDLALHSVIG 128
G ID A+HSAKD+P L +GL ++A P E R DV + H S+++L IG
Sbjct: 62 VGRIDVALHSAKDLPDDLREGLSLAAITPLEGPREDVLVLHPRWASASSVEELPAGLRIG 121
Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
TSS RR+ L RSD ++D RG IE RL ++++ + +++A + RL E
Sbjct: 122 TSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAALALTRLALEVPHL-- 179
Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227
F P P QG + + +A L V++ W
Sbjct: 180 --PLPFVPHPLQGRLAAVVREGDEEAHRLCDVLDDRGRW 216
>gi|260890849|ref|ZP_05902112.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254]
gi|260859402|gb|EEX73902.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254]
Length = 135
Score = 92.5 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229
+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K L+K+IN ++
Sbjct: 1 MLAAAGLKRVGLENRITEYFDTDSFMPAPGQGILCIQCRENDNKILNLLKIINDDEVTIM 60
Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289
ER F DG C + I + +G+TL G+ +G + GNR +
Sbjct: 61 CKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGM-FNDNGTRIFK-EVEGNRENPKETA 118
Query: 290 RDAAQYIRFI 299
+ A+ I+
Sbjct: 119 QKLAEEIKEE 128
>gi|313896589|ref|ZP_07830138.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312974774|gb|EFR40240.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 120
Score = 91.8 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253
P+ GQGA+ IE ++ + + + D + ERAFL ++G C+ + +A
Sbjct: 1 MLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRVEGGCQIPVGVYAE 60
Query: 254 C-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
G LY ++ + DG +G A IG A+ + + + +
Sbjct: 61 IGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDMGGREIL 113
>gi|213623045|ref|ZP_03375828.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 88
Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287
V ERA L+G C+ I +A ++ +V A DG + R G+ A
Sbjct: 1 MRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQ 60
Query: 288 IGRDAAQYIRFISNKNVF 305
+G A+ + + +
Sbjct: 61 MGISLAEELLENGARAIL 78
>gi|62319114|dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 130
Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDGSC++ IA
Sbjct: 10 SLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSCRTPIA 69
Query: 250 GFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFISNKNVF 305
G+A + F G+V + DG E SR G D + +G+DA Q + + F
Sbjct: 70 GYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGFF 128
>gi|23011609|ref|ZP_00051918.1| COG0181: Porphobilinogen deaminase [Magnetospirillum
magnetotacticum MS-1]
Length = 119
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 56/114 (49%)
Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251
E+ P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA
Sbjct: 2 EEMLPAVAQGALGIECRARDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAAL 61
Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
A +G L G++ DG V R G DA IGRDA ++ + F
Sbjct: 62 ARIQGDRLSLDGLLFLPDGSRHWAVHREGATSDAAEIGRDAGAELKRAAGDVYF 115
>gi|167038282|ref|YP_001665860.1| porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|166857116|gb|ABY95524.1| Porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC
33223]
Length = 168
Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 7/164 (4%)
Query: 138 LLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS 197
+ SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+
Sbjct: 4 IQALMSDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLESIITEYFPPDVVVPA 63
Query: 198 PGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-- 254
P QG + +E + QE I T+ + ER L +C+ +A
Sbjct: 64 PCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASVERELLKAFGVNCRQPFGAYAQYRK 123
Query: 255 --KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + D + G + + +
Sbjct: 124 EKDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEEF 165
>gi|325118217|emb|CBZ53768.1| putative porphobilinogen deaminase [Neospora caninum Liverpool]
Length = 683
Score = 87.9 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 93/263 (35%), Gaps = 76/263 (28%)
Query: 116 QSLKDLALHSVIGTSSLRRKALLLRW--RSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173
+ A + GT SLRR+ALL ++ RG ++TR+ ++ K A LLA
Sbjct: 401 KEHFGDAGKPIFGTCSLRRQALLHALLPPGSFHLMGLRGNVQTRMRRIEEGKLDATLLAA 460
Query: 174 AGIKRL----------------------------KKEKVIKEILNIEDFPPSPGQGAICI 205
AG+KRL + V +L E F P+ QG + +
Sbjct: 461 AGLKRLCLLPSLLSPSRDSGPLASPLGCVSTHARGRACVEAVLLPAEVFVPAVCQGVVGV 520
Query: 206 ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--------- 256
+ + + L+ +N + CERAFL LDGSC++ IAG A +G
Sbjct: 521 QCRSADTRILSLLHSLNSLSSRGQARCERAFLRALDGSCRTPIAGIAQWRGVTDRRQETT 580
Query: 257 ---------------------------------STLYFYGIVLASDGKIFHEVSR----N 279
+ L F G++ DGK R
Sbjct: 581 QPERKTPDERTDRRDVKGGEEGWGGHPDCFTEKAELRFCGVLATPDGKHLFRHERAVQGV 640
Query: 280 GNRCDAINIGRDAAQYIRFISNK 302
+A +G A+ I+ +
Sbjct: 641 RTPEEAEELGHAVAEEIKKAAGA 663
Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 53/73 (72%)
Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99
I+PL T GD + L ++GGKGLFT+E++ L++G++D VHS KD+PT+L G +I A
Sbjct: 242 IVPLQTTGDSALHLPLAQLGGKGLFTKELDVALLAGQVDVVVHSMKDVPTELPPGTEIGA 301
Query: 100 YLPREDIRDVFIS 112
+LPRED RD FI
Sbjct: 302 FLPREDPRDAFIY 314
Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSL 27
R+G+R SPLALA A E L
Sbjct: 142 NSTLRVGSRASPLALAQAREFVYRL 166
>gi|146332076|gb|ABQ22544.1| porphobilinogen deaminase-like protein [Callithrix jacchus]
Length = 163
Score = 87.9 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 29/154 (18%)
Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241
+ +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL L+
Sbjct: 1 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRHLE 60
Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD------ 284
G C +A K LY G V + DG + + +G D
Sbjct: 61 GGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLVGI 120
Query: 285 ------------AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 121 TARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 154
>gi|256751190|ref|ZP_05492071.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749915|gb|EEU62938.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1]
Length = 161
Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 7/160 (4%)
Query: 142 RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201
SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+P QG
Sbjct: 1 MSDIQIVPVRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLENIITEYFPPDVVVPAPCQG 60
Query: 202 AICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAELDGSCKSAIAGFAYC----KG 256
+ +E + + T+ + ER L +C+ +A
Sbjct: 61 ILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFGVNCRQPFGAYAQYRKEEDE 120
Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ + D + G + + +
Sbjct: 121 EKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEEF 158
>gi|255029220|ref|ZP_05301171.1| porphobilinogen deaminase [Listeria monocytogenes LO28]
Length = 128
Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246
E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +L+G C+
Sbjct: 6 EDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEI 65
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
IAGFA + F G+V +DG I E + G + IG A+ + +
Sbjct: 66 PIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSEGADTII 122
>gi|238488539|ref|XP_002375507.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357]
gi|220697895|gb|EED54235.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357]
Length = 90
Score = 87.1 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64
P RIGTR S LA+ A R+ L + P + I L T GDR L G K L+
Sbjct: 10 PLRIGTRRSNLAMVQAEGIRNCLQKI--APGRSFEIEALRTLGDRDQLTALYNFGAKSLW 67
Query: 65 TEEIEKKLISGEIDCAVHSAKD 86
T E+E+KL +GE+D VH K
Sbjct: 68 TTELEEKLNAGELDVIVHCLKG 89
>gi|329945529|ref|ZP_08293267.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528774|gb|EGF55723.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 149
Score = 87.1 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVH-------KIPPHNIVIIPLSTKGDRITNRTL 55
++ R+GTR S LAL + + +L + ++ + T GD L
Sbjct: 10 ERRLRLGTRGSRLALTQSGQVADALRQAAAAGARAPGCDNLELDLVTVRTDGDGDR-TPL 68
Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115
++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED D +
Sbjct: 69 RQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPHDALCARDG 128
Query: 116 QSLKDLALHSVIGTSSLRRKA 136
+L L + +GT S RR A
Sbjct: 129 LTLATLPDGARVGTGSPRRAA 149
>gi|293194048|ref|ZP_06609930.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309]
gi|292819802|gb|EFF78811.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309]
Length = 166
Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVIN 222
+ A++LA AG++R+ + ++L+ P+P QGA+ IET + L+ +N
Sbjct: 4 ERLDAVVLALAGLRRIGLDAHATDVLHPAIMMPAPSQGALAIETRDEDDPLLHALLGTLN 63
Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG 280
H T + + ERA L+ L C + + FA S L V++ DG+ + +
Sbjct: 64 HRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRERVKARGSL 123
Query: 281 N------RCDAINIGRDAAQYIRFISNKNVFN 306
+A +G D A+ + V +
Sbjct: 124 ALTDSVGLDEAARLGEDVARQLLAGGAAEVTD 155
>gi|323338379|gb|EGA79604.1| Hem3p [Saccharomyces cerevisiae Vin13]
Length = 152
Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176
++GTSS+RR A L R + RG I+TRL KL++ + I+LA AG+
Sbjct: 1 MTFQTGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGL 60
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ E I + + + + GQGA+ IE + K +++ I + ERA
Sbjct: 61 MRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERAL 120
Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYG 263
+ L+G C I + T + G
Sbjct: 121 MRTLEGGCSVPIGVESKYNEETKKITIKG 149
>gi|51241768|dbj|BAD36778.1| porphobilinogen deaminase [Homo sapiens]
Length = 157
Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 29/146 (19%)
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+G C +A
Sbjct: 3 HPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVA 62
Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-------------- 284
K LY G V + DG + + +G D
Sbjct: 63 VHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITARNIPRG 122
Query: 285 ----AINIGRDAAQYIRFISNKNVFN 306
A N+G A + KN+ +
Sbjct: 123 PQLAAQNLGISLANLLLSKGAKNILD 148
>gi|62467569|gb|AAX83934.1| Hem3p [Saccharomyces cerevisiae]
Length = 97
Score = 86.0 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M + IG R S LA+ + + + + P ++ + L T GD+I + L GG
Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEEKY--PDYDCKVFTLQTLGDQIQFKPLYSFGG 58
Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMP 88
K L+T+E+E L ++D VHS KDMP
Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMP 90
>gi|218673006|ref|ZP_03522675.1| porphobilinogen deaminase [Rhizobium etli GR56]
Length = 111
Score = 85.6 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 69/108 (63%)
Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258
QGAICIE+ V + +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G
Sbjct: 1 AQGAICIESRVGDTGIDDLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDL 60
Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306
+ F G+++ DG+ H V+ +G+R DA +G A Q +R + F+
Sbjct: 61 IRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARAGSAFFD 108
>gi|169837036|ref|ZP_02870224.1| Porphobilinogen deaminase [candidate division TM7 single-cell
isolate TM7a]
Length = 119
Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ E + + F P+PGQG +CI+ N+ K + L+++IN ++ ER F DG C
Sbjct: 1 MSEYFDTDFFMPAPGQGILCIQCRENDNKIRHLLEIINDDEVTMMCEAEREFSKIFDGGC 60
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299
+ I + +G TL G+ +G + GN+ + I + A+ I+
Sbjct: 61 HTPIGCSSVIEGDTLKLKGM-FNDNGSRMLK-EVEGNKENPKEIAQKLAEEIKKE 113
>gi|77799154|gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor]
Length = 98
Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 215 QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIF 273
E + +NHEDT +V CER FLA LDG+C++ IA +AY F G++ + DG
Sbjct: 1 MEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPIAAYAYRDKDGNCSFRGLLASPDGSKV 60
Query: 274 HEVSRNGNR--CDAINIGRDAAQYIRFISNKNVFN 306
E +R+G D + +G+DA ++ + F+
Sbjct: 61 FETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFD 95
>gi|221488268|gb|EEE26482.1| porphobilinogen deaminase, putative [Toxoplasma gondii GT1]
Length = 174
Score = 83.3 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249
+ F P+ QG I ++ + L++ +N + CERAFL LDGSC++ IA
Sbjct: 37 PADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIA 96
Query: 250 GFAYCK-GSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNKNV 304
G A + + L F G++ DGK R +A +GR A+ I+ + +
Sbjct: 97 GIAEWRAKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGADR 156
Query: 305 F 305
Sbjct: 157 L 157
>gi|213583680|ref|ZP_03365506.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 69
Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%)
Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305
I +A ++ +V A DG + R G+ A +G A+ + + +
Sbjct: 1 PIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAIL 59
>gi|317471677|ref|ZP_07931019.1| porphobilinogen deaminase domain-containing protein [Anaerostipes
sp. 3_2_56FAA]
gi|316900848|gb|EFV22820.1| porphobilinogen deaminase domain-containing protein [Anaerostipes
sp. 3_2_56FAA]
Length = 133
Score = 80.6 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223
+ A+++A AG+KR ++ I ++E+ P+ GQG +C++ Q L I+
Sbjct: 1 GQYSALIMAAAGLKRAGLKERISRYFSVEEMLPAAGQGTLCVQV--RKDFDQSLFFCIHD 58
Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283
+T ER F+ LDG C S IA +A G+ L G+ + ++S NG
Sbjct: 59 RETELVTEAERGFVRALDGGCSSPIAAYAEITGNDLCLTGLYYNAADNTGRKMSINGKAQ 118
Query: 284 DAINIGRDAAQYI 296
DA +G A+ I
Sbjct: 119 DAGELGCRLAEQI 131
>gi|329944047|ref|ZP_08292313.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328531093|gb|EGF57944.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 206
Score = 80.2 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 25/168 (14%)
Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVI 221
A++LA +G++RL E E+L++E P+P QGA+ +E + +
Sbjct: 30 GDLDAVVLALSGLRRLGLEHCASEVLDLETMLPAPAQGALAVEARAGEGSAALARAAAAL 89
Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEV 276
+ E T +V ERA +A L C + + +A+ G L +V + DG
Sbjct: 90 DDEPTRLAVTAERALMARLGAGCAAPVGAWAHLSGGEQEQRVLALRAVVTSLDGGKEVGC 149
Query: 277 SRNGNRCD------------------AINIGRDAAQYIRFISNKNVFN 306
+ + A +G AA+ + V +
Sbjct: 150 ELSAELPEADSGPDTYGNAVAQAVRAAEALGVRAAEVLLEDGAAEVVD 197
>gi|302850188|ref|XP_002956622.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f.
nagariensis]
gi|300258149|gb|EFJ42389.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f.
nagariensis]
Length = 206
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179
+L S +GTSS RR A + + V+ RG +ETRL ++ + + A +L+ AG++RL
Sbjct: 1 ELMPGSRVGTSSSRRAAQIRHGFPHLQVVQLRGNVETRLERIKSREISATVLSMAGLQRL 60
Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239
E + +L++++ P+ QGA+ + ++P + + I+H T+ V+ ERA L
Sbjct: 61 GCEDMASAVLSMDEMLPAACQGAVGVVCREDDPWVIQQLTAISHRSTFLEVSAERACLTA 120
Query: 240 LDGSCKS----------AIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNG----NRC 283
L GS ++ A A T+ V G+ + N+
Sbjct: 121 LLGSEEAGRAGEHFPALAWGCHASHHPDSATMDLDCFVSDLQGEGLTRYTEYDRLILNQT 180
Query: 284 DAINIGRDAAQYIRFISN 301
DA ++G +R ++
Sbjct: 181 DAEDLGSLYGNLMRMVAG 198
>gi|3172393|gb|AAC18578.1| porphobilinogen deaminase [Geobacillus stearothermophilus]
Length = 57
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61
+ +G+R S LAL L + P + + TKGD+I N TL+++GGK
Sbjct: 1 MRKIIVGSRRSKLALTQTNWVIEQLKRLGA--PFEFEVKEIVTKGDKIINVTLSKVGGK 57
>gi|207347144|gb|EDZ73427.1| YDL205Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 144
Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 6/136 (4%)
Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236
R+ E I + + + + GQGA+ IE + K +++ I + ERA
Sbjct: 1 MRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERAL 60
Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRC----DAINIGR 290
+ L+G C I + T L IV+ +G E D++ G+
Sbjct: 61 MRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDSMACGK 120
Query: 291 DAAQYIRFISNKNVFN 306
A+ + K + +
Sbjct: 121 ILAERMIADGAKKILD 136
>gi|467060|gb|AAA17244.1| hem3a [Mycobacterium leprae]
Length = 134
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 9/121 (7%)
Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252
P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C + + A
Sbjct: 2 QMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCSAPVGAIA 61
Query: 253 YCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303
L G V A DG S A +G A + + +
Sbjct: 62 QVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVELFELGARE 121
Query: 304 V 304
+
Sbjct: 122 L 122
>gi|326772618|ref|ZP_08231902.1| hydroxymethylbilane synthase [Actinomyces viscosus C505]
gi|326637250|gb|EGE38152.1| hydroxymethylbilane synthase [Actinomyces viscosus C505]
Length = 140
Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVH-------------KIPPHNIVIIPLSTKGDRI 50
+ R+GTR S LAL + + +LM I ++ + T GD
Sbjct: 9 RRLRLGTRGSRLALTQSGQVAEALMAAGGGGAAAAAGKASEGSGSLGIDLVTVRTDGDGD 68
Query: 51 TNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110
L ++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED RD
Sbjct: 69 R-TPLRQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPRDAL 127
Query: 111 ISHTAQSLKD 120
+ + +L D
Sbjct: 128 CARDSLTLAD 137
>gi|294896302|ref|XP_002775489.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239881712|gb|EER07305.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 539
Score = 72.5 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 60/280 (21%), Positives = 101/280 (36%), Gaps = 53/280 (18%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96
+ GD L ++ G+FT + L++G D VHS KD+P G
Sbjct: 7 EVECHYREAPGDTNLKDPLWKMPETGVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTT 66
Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSV--IGTSSLRRKALLLRW-------RSDISV 147
+ A LPR D RD+ + + + + +SS RR+ L + + +
Sbjct: 67 VVATLPRADPRDLLLIRRDAIEEMTSEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQF 126
Query: 148 IDFRGKI--------------ETRLNKLNN---------NKAHAILLAYAGIKRLKKEKV 184
D RG I +TR+ KL + + H +++A A + R +
Sbjct: 127 RDVRGNIQVQPMGSSPYEGLLQTRMRKLMDPTIHDESLGCRPHGLVVAKAAVDRFIRSTR 186
Query: 185 -----------------IKEILNIEDFPPSPGQGAICIETHVNNPKAQ--ELVKVINHED 225
+L + P + QGA+ IE K ++V+ +N
Sbjct: 187 EEFKESRQLVQGYISDCRCMVLPLSANPTAAAQGALGIEVSTAPEKEHVRKIVRSLNDRS 246
Query: 226 TWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYG 263
T+D+ + E+ L G C I G L+ G
Sbjct: 247 TFDAASKEKELLNSYGGGCHQKIGCTILPRQYGDVLFLCG 286
>gi|306835113|ref|ZP_07468154.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726]
gi|304569028|gb|EFM44552.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726]
Length = 89
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67
IGTR S LA A R L+D + + ++T GD TN E G G+FT+
Sbjct: 4 IGTRGSKLATTQAGHVRDWLIDA----GFDSELHIVTTAGD--TNMAPVERIGVGVFTQA 57
Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGL 95
+ + L GE D AVHS KD+PT
Sbjct: 58 LREALCRGECDIAVHSFKDLPTAEDDRF 85
>gi|237833021|ref|XP_002365808.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49]
gi|211963472|gb|EEA98667.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49]
Length = 729
Score = 70.6 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 58/89 (65%)
Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83
S L ++ + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS
Sbjct: 252 ASLLRVDSRLEYGELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHS 311
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFIS 112
KD+PT+L +G +I AYLPRED RD I
Sbjct: 312 LKDVPTELPEGTEIGAYLPREDPRDALIF 340
Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 33/164 (20%)
Query: 125 SVIGTSSLRRKALLLRW--RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180
IGT SLRR+ALL S ++ RG ++TR++++ A LLA AG+KRL
Sbjct: 440 PRIGTCSLRRQALLYALLPPSSFQLMGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLL 499
Query: 181 -----------------------------KEKVIKEILNIEDFPPSPGQGAICIETHVNN 211
V +L + F P+ QG I ++ +
Sbjct: 500 SAMLAPSPSATPSPCPASSPNEASRGTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSAD 559
Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
L++ +N + CERAFL LDGSC++ IAG A +
Sbjct: 560 TGILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIAGIAEWR 603
Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNKNVF 305
+ + + L F G++ DGK R +A +GR A+ I+ + +
Sbjct: 655 CFTEKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGADRL 712
Score = 42.8 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP 35
EK P R+G+R SPLALA A + L + P
Sbjct: 159 EKTPLRVGSRASPLALAQARQFVYRL--ALRFPD 190
>gi|70780272|gb|AAZ08387.1| porphobilinogen deaminase [Toxoplasma gondii]
Length = 747
Score = 70.6 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 58/89 (65%)
Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83
S L ++ + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS
Sbjct: 255 ASLLRVDSRLEYGELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHS 314
Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFIS 112
KD+PT+L +G +I AYLPRED RD I
Sbjct: 315 LKDVPTELPEGTEIGAYLPREDPRDALIF 343
Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 33/164 (20%)
Query: 125 SVIGTSSLRRKALLLRW--RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180
IGT SLRR+ALL S ++ RG ++TR++++ A LLA AG+KRL
Sbjct: 443 PRIGTCSLRRQALLYALLPPSSFQLMGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLL 502
Query: 181 -----------------------------KEKVIKEILNIEDFPPSPGQGAICIETHVNN 211
V +L + F P+ QG I ++ +
Sbjct: 503 SAMLAPSPSATPSPCPAPSPNETSRGTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSAD 562
Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255
L++ +N + CERAFL LDGSC++ IAG A +
Sbjct: 563 TGILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIAGIAEWR 606
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 5/63 (7%)
Query: 248 IAGFAYCKGSTL-YFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNK 302
A G L F G++ DGK R +A +GR A+ I+ +
Sbjct: 668 CGVLATPDGKQLLRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGA 727
Query: 303 NVF 305
+
Sbjct: 728 DRL 730
Score = 42.8 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP 35
EK P R+G+R SPLALA A + L + P
Sbjct: 159 EKTPLRVGSRASPLALAQARQFVYRL--ALRFPD 190
>gi|281415815|ref|ZP_06247557.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
Length = 71
Score = 69.8 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60
M P RIGTR S LA +L ++ + T+GD +T +L +GG
Sbjct: 1 MS--PLRIGTRGSALATTQTSHVAEALTARS---GLAHELVVIRTEGD-VTTGSLASLGG 54
Query: 61 KGLFTEEIEKKLISG 75
G+F + ++ G
Sbjct: 55 TGVFASALRAAVLDG 69
>gi|70931402|ref|XP_737390.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56512740|emb|CAH87819.1| hypothetical protein PC000109.00.0 [Plasmodium chabaudi chabaudi]
Length = 169
Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
+ LN P+ QG I + ++ NNP+ +++K IN E + N ER FL ++DGSC
Sbjct: 37 NIQKLNTNVMCPALCQGIIAVTSNKNNPEISQILKNINDEKSQIMANIERTFLHKIDGSC 96
Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
I G+ + + F I+ +G H++ + + I +AA+ I+
Sbjct: 97 TMPIGGYTKFSKNKIIFNAIINDINGLESHKIKVVRHLNNLDGIADEAAEKIKEKIGIEQ 156
Query: 305 FN 306
FN
Sbjct: 157 FN 158
>gi|149452688|ref|XP_001516450.1| PREDICTED: similar to hydroxymethylbilane synthase [Ornithorhynchus
anatinus]
Length = 218
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLR 133
+D VHS KD+PT L G I A RE D + H ++L L SV+GTSSLR
Sbjct: 90 VDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKHVGKTLATLPEKSVVGTSSLR 149
Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKE 187
R A L R + RG + TRL KL+ + AI+LA AG++RL + + +
Sbjct: 150 RAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRLGWQSRLGQ 204
>gi|58698960|ref|ZP_00373817.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534526|gb|EAL58668.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 62
Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57
+IGTR S LA+ A E + L+D P +I I+ + + GD+ N L E
Sbjct: 13 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKSSGDKYANANLAE 62
>gi|332187060|ref|ZP_08388801.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas
sp. S17]
gi|332013070|gb|EGI55134.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas
sp. S17]
Length = 107
Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262
+ IET ++ A L+ I+H +T V ER+ LA L C S +A A G L
Sbjct: 1 MGIETRADDAAATMLIGSIDHAETHACVMAERSLLAALQADCHSPVAALASLSGEMLTLR 60
Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304
+LA DG G +G A + + V
Sbjct: 61 AELLAEDGSARVSGWVEGAL--GEELGPRLAIDLLDRAPPEV 100
>gi|94468604|gb|ABF18151.1| hydroxymethylbilane synthase-like protein [Aedes aegypti]
Length = 349
Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238
+ EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL
Sbjct: 1 MGWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSFLK 60
Query: 239 ELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHEVSRNGNRC 283
L G C + +A K + L G V + DGK +
Sbjct: 61 TLGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGKTEIRADDGCSVE 111
>gi|167949214|ref|ZP_02536288.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 136
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 19/139 (13%)
Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231
AG+KRL E+ I + E P+ GQGAI IE ++ + L+ ++H DT V+
Sbjct: 6 PSAGLKRLGFEQRITAFIAPEQSLPAIGQGAIGIECRSDDAQVNALIAPLHHVDTAACVH 65
Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG----------KIFHEVSRNGN 281
ERA L G S + V A+ G G
Sbjct: 66 AERAMNNRLMGG--SPC-ADCRLRD------AGVPATSGCVVWWARSTVARSCVGEAEGT 116
Query: 282 RCDAINIGRDAAQYIRFIS 300
+A ++G A+ + +
Sbjct: 117 PDEAESLGVGLAERLLELG 135
>gi|307826363|ref|ZP_07656567.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
gi|307732604|gb|EFO03477.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96]
Length = 337
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212
+ TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +
Sbjct: 1 NVNTRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIALL 60
Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDG 242
A I +W A +
Sbjct: 61 VAGAGAFYIADYASWKVAYFVMATAMSVGL 90
>gi|113707391|gb|ABI36594.1| hydroxymethylbilane synthase [Homo sapiens]
Length = 87
Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260
GA+ +E + +LV V++ +T ERAFL L+G C +A K LY
Sbjct: 1 GALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLY 60
Query: 261 FYGIVLASDGKIFHEVSRNGNR 282
G V + DG + +
Sbjct: 61 LTGGVWSLDGSDSIQETMQATI 82
>gi|291080775|ref|ZP_06535168.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 47
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75
P + ++P+ T+GD I + L ++GGKGLF +E+E L
Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALRRK 46
>gi|73760286|dbj|BAE20060.1| hydroxymethylbilane synthase [Capra hircus]
Length = 109
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 106 IRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162
+ + H ++L+ L SV+GTSSLRR A L R + + RG + TRL KL+
Sbjct: 17 PMNAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLD 76
Query: 163 N-NKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194
+ AI+LA AG++R+ + + +IL+ E+
Sbjct: 77 ELQEFSAIILAAAGLQRMGWQNRVGQILHPEEC 109
>gi|209738608|gb|ACI70173.1| Porphobilinogen deaminase [Salmo salar]
gi|221220784|gb|ACM09053.1| Porphobilinogen deaminase [Salmo salar]
Length = 55
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL 43
+ RIGTR S LA L ++ P +I I+ +
Sbjct: 17 RVIRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGI 54
>gi|301102801|ref|XP_002900487.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101750|gb|EEY59802.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296
+ A TL VL+ DGK + +G R +G+ A+
Sbjct: 1 MGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQLAERF 49
>gi|238917296|ref|YP_002930813.1| hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750]
gi|238872656|gb|ACR72366.1| Hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750]
Length = 287
Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 14/218 (6%)
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVH-----SAKDMPTKLLKGLQISAYLPREDIRDVFI 111
EIGG ++ +E + V + +L G+ IS + R D R V I
Sbjct: 42 EIGGSDIY-PALEALIDDNIDMVLVDMRMLVEMEKSGQQLDDGIVISGVIKRRDPRYVMI 100
Query: 112 SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171
KD+ ++V+ T S A++ ++ + I+ ++KL++ + A+
Sbjct: 101 RRRG--TKDVVENAVVVTDSDENAAVICEMYDNVECV-VENNIKDCMSKLDSEECDAVFA 157
Query: 172 AYAGIKRLKKEK---VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228
Y I+ + +++ D P GQG CI T+ + + ++H T
Sbjct: 158 FYDDIRIARLYNGLKYKYTLMDFSDCVPPHGQGIYCILTNGKRS-VIKHMFDVSHRTTAM 216
Query: 229 SVNCERAFLAELDGSCKSA-IAGFAYCKGSTLYFYGIV 265
S + E + L + + G + Y V
Sbjct: 217 SFDIEEDIIRRLLMNDYVKSCNAYVKISGDKIEVYADV 254
>gi|2415549|emb|CAA04300.1| porphobilinogen deaminase [Campylobacter jejuni]
Length = 88
Score = 52.5 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 35/82 (42%)
Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269
++ K EL+K +N E+ + ER F+A L+G C+ I A G + ++ D
Sbjct: 7 HDEKILELLKCLNDENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPD 66
Query: 270 GKIFHEVSRNGNRCDAINIGRD 291
G + R + D G
Sbjct: 67 GSEILKDKRMIKKNDFKGFGES 88
>gi|266622117|ref|ZP_06115052.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM
13479]
gi|288866173|gb|EFC98471.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM
13479]
Length = 121
Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 3/114 (2%)
Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243
E F P+ GQG + +E + E+ I ED + ER L LD
Sbjct: 11 YDFHYFACEAFIPAGGQGILAVE-GRIEDRICEMAVRIQDEDAKTCLMLERKILKLLDAG 69
Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297
C + ++ +G + +G + D + V G + + AA+ +R
Sbjct: 70 CHEPVGVYSRIRGEEIEVFG-ISRRD-RETKRVYLTGGIGELDLLAERAAKGLR 121
>gi|3668361|gb|AAC61857.1| porphobilinogen deaminase [Prosthecochloris vibrioformis]
Length = 43
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78
NI + + T GD + + L++IG GLFT++IEK L++GEID
Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEID 43
>gi|291546287|emb|CBL19395.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain
[Ruminococcus sp. SR1/5]
Length = 40
Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLM 28
M++ IG+R S LA+ + R +
Sbjct: 1 MKRDKIVIGSRESKLAVLQSEMVRDYIK 28
>gi|169841475|ref|ZP_02874588.1| hypothetical protein cdivTM_30268 [candidate division TM7
single-cell isolate TM7a]
Length = 22
Score = 43.6 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 1 MEKKPFRIGTRCSPLALAHAF 21
M+ IGTR S LALA A
Sbjct: 1 MKSNKIIIGTRGSILALAQAE 21
>gi|34391573|gb|AAN46745.1| hydroxymethylbilane synthase [Sus scrofa]
Length = 37
Score = 42.8 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSL 27
+ + R+GTR S LA ++L
Sbjct: 12 KMRVIRVGTRKSQLARIQTDSVVATL 37
>gi|225159193|ref|ZP_03725496.1| porphobilinogen deaminase [Opitutaceae bacterium TAV2]
gi|224802195|gb|EEG20464.1| porphobilinogen deaminase [Opitutaceae bacterium TAV2]
Length = 125
Score = 42.5 bits (98), Expect = 0.091, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235
+ + L E P+ GQ AI ++ T +V ERA
Sbjct: 7 LGITGWPGLTFHPLGFEHMVPAVGQAAIALQC---RSADAPRFAPHLDARTARAVTLERA 63
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYF 261
F L G C++A+ A TL+F
Sbjct: 64 FQTALGGGCQTALGVHAG--DDTLWF 87
>gi|4469314|emb|CAB38454.1| hydroxymethylbilane synthase [Rattus norvegicus]
Length = 42
Score = 42.1 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 2 EKKPFRIGTRCSPLALAHAFETRSSL 27
+ R+GTR S LA + L
Sbjct: 17 MMRVIRVGTRKSQLARIQTDTVVAML 42
>gi|281415816|ref|ZP_06247558.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665]
Length = 106
Score = 41.7 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 16/84 (19%), Gaps = 28/84 (33%)
Query: 247 AIAGFAYCKGST-----LYFYGIVLASDGKIFHEVS-----------RNGNRC------- 283
I A + +V A DG + G+
Sbjct: 1 PIGAVARVGDGEAGAPRIEMTAMVAALDGSRVLRRTSSVQLDPVPADVVGDPAAADEWLE 60
Query: 284 -----DAINIGRDAAQYIRFISNK 302
A +G A+
Sbjct: 61 DTLFVAAEALGVHVAEQFVAEGAD 84
>gi|118082447|ref|XP_001235330.1| PREDICTED: hypothetical protein [Gallus gallus]
Length = 1622
Score = 41.7 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 51/241 (21%), Gaps = 21/241 (8%)
Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL---QISAYLPREDI 106
+ L + + ++E + + +P + +
Sbjct: 1247 FNSSQLDCREDQFIVEAKLEDPCCFSYLCVCESCIEPVPLCNEGEILTVDLHTIHYCCPH 1306
Query: 107 RDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNK 165
+ + + I TR KL K
Sbjct: 1307 YYCVCDENFCPEPPMNCTDDMMVVKEKVPGQCCPEWHCECSC---ENITTRTCKLGEVQK 1363
Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ-------GAICIETHVNNPKAQELV 218
+ + + G EK I E +PGQ G +C K Q
Sbjct: 1364 IDSSISSACGCTHYICEKDDVCIFQ-EVTILNPGQSVIQYLDGDLCYTVQCLREKDQNTG 1422
Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278
H T + A + S + G L +G
Sbjct: 1423 YNAMHFTTVNCSQQCEAHQLYIPSSSHHSCCGTCQ------NVSCSFLTENGTRIVYEEG 1476
Query: 279 N 279
+
Sbjct: 1477 S 1477
>gi|227485228|ref|ZP_03915544.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227236790|gb|EEI86805.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 32
Score = 40.9 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA 267
L+G C+ I +A G +L+ +V A
Sbjct: 1 MNTRLEGGCQVPIGSYAELDGDSLWLRALVGA 32
>gi|148840388|gb|ABR14625.1| hydroxymethylbilane synthase [Felis catus]
Length = 31
Score = 40.9 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 19 HAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT 51
+ L ++ P I+ +ST GD+I
Sbjct: 1 QTDSVVAVLKALY--PGLQFEIVAMSTTGDKIL 31
>gi|296803895|ref|XP_002842800.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
gi|238846150|gb|EEQ35812.1| porphobilinogen deaminase [Arthroderma otae CBS 113480]
Length = 282
Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDA 292
+ L C + I + L IV++ D E + + + ++ G+
Sbjct: 200 LMCALRSGCNAPIGIETEWTATHLSIRAIVVSLDISQSVEDAIDAMMHTKDESDAPGQAL 259
Query: 293 AQYIRFISNKNVF 305
A + +
Sbjct: 260 A-RLFGAGVAPIL 271
>gi|320534143|ref|ZP_08034681.1| hypothetical protein HMPREF9057_02577 [Actinomyces sp. oral taxon
171 str. F0337]
gi|320133642|gb|EFW26052.1| hypothetical protein HMPREF9057_02577 [Actinomyces sp. oral taxon
171 str. F0337]
Length = 42
Score = 39.8 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 2 EKKPFRIGTRCSPLALAHAFET 23
E + R+GTR S LAL + +
Sbjct: 7 ESRRLRLGTRGSRLALTQSGQV 28
>gi|256394392|ref|YP_003115956.1| ROK family protein [Catenulispora acidiphila DSM 44928]
gi|256360618|gb|ACU74115.1| ROK family protein [Catenulispora acidiphila DSM 44928]
Length = 415
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 16/59 (27%), Gaps = 4/59 (6%)
Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHE--VSRNG-NRCDAINIGRDAAQYIRFISN 301
A A + ++ DG G + + + D A+ + +
Sbjct: 97 PEAAHAVAFDVGARHLRAALVGLDGTEVVRRDAEVEGRSAEEMVAAAVDLARELVEAAG 155
>gi|167946284|ref|ZP_02533358.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 51
Score = 36.7 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100
GGKGLF +E+E+ ++ G D AVHS KD+P +L +GL +
Sbjct: 3 RFGGKGLFVKELEQAMLEGRADIAVHSMKDVPAELPEGLHLPVI 46
>gi|261403042|ref|YP_003247266.1| protein of unknown function DUF39 [Methanocaldococcus vulcanius M7]
gi|261370035|gb|ACX72784.1| protein of unknown function DUF39 [Methanocaldococcus vulcanius M7]
Length = 507
Score = 36.3 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298
+A + + + DGKI + + G+ + R+ A+ ++
Sbjct: 314 YAVLRSGKIDLKVEI---DGKIVEKTVKTGSVSSY-KMAREVAEELKK 357
>gi|260832654|ref|XP_002611272.1| hypothetical protein BRAFLDRAFT_73331 [Branchiostoma floridae]
gi|229296643|gb|EEN67282.1| hypothetical protein BRAFLDRAFT_73331 [Branchiostoma floridae]
Length = 1508
Score = 36.3 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-----TLTEIGG-KGLFTEEI 68
L+ + R L +I I L + GD + L E G +++ +
Sbjct: 23 LSSVQSEYVRE-LQKAMAEADLSIEIEALKSLGDVFLEKGRNSGDLAEFGKAHSVYSVAL 81
Query: 69 EKKLISGEIDCAVHSAKDMPTKLLK 93
+ G++ +H K T + K
Sbjct: 82 TRCTHIGQVQTLLHRVKYARTFIDK 106
>gi|12045059|ref|NP_072869.1| Ser/Thr protein phosphatase family protein [Mycoplasma genitalium
G37]
gi|255660208|ref|ZP_05405617.1| Ser/Thr protein phosphatase family protein [Mycoplasma genitalium
G37]
gi|11377624|pir||H64222 VPS29-like phosphoesterase-related protein MG207 [similarity] -
Mycoplasma genitalium
gi|3844805|gb|AAC71425.1| Ser/Thr protein phosphatase family protein [Mycoplasma genitalium
G37]
gi|166078656|gb|ABY79274.1| Ser/Thr protein phosphatase family protein [synthetic Mycoplasma
genitalium JCVI-1.0]
Length = 167
Score = 35.9 bits (81), Expect = 7.1, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 48/153 (31%), Gaps = 11/153 (7%)
Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII---PLSTKGDRITNRTLTE 57
M+ K ++ L +A +++ +++I ++TK N T
Sbjct: 1 MQNKLIKV------LVIADTHGQNQRWIELKNYHNPDVIIHAGDHMTTKQFMDQNATFWV 54
Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117
G EIE + +H + L K Q+ ++ DV I +
Sbjct: 55 AGNNDSIGNEIEIFQLGQINFVLMHGHQAPRDNLKKWYQLLVLKAQQYPCDVLIFGHSHI 114
Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150
++ + + L R +++
Sbjct: 115 EYTNKINMIQLINPG--SLQLPRNQTNTPSYCT 145
>gi|109940312|sp|Q5E968|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor
Length = 329
Score = 35.9 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 12/168 (7%)
Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL--LKGLQISAYLP 102
+KGD I+ R + E K + +E L + A++ DM ++ K +
Sbjct: 39 SKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPAS 98
Query: 103 REDIRDVFISHTAQ--SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
R D + + + + ++ + + SV G+++ + K
Sbjct: 99 RSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGK 158
Query: 161 L----NNNKAHAILL--AYAG--IKRLKKEKVIKEILNIEDFPPSPGQ 200
L N + G + + ++ ED P GQ
Sbjct: 159 LLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQ 206
>gi|77735825|ref|NP_001029607.1| cathepsin K [Bos taurus]
gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus]
gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus]
gi|296489554|gb|DAA31667.1| cathepsin K [Bos taurus]
Length = 334
Score = 35.9 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 12/168 (7%)
Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL--LKGLQISAYLP 102
+KGD I+ R + E K + +E L + A++ DM ++ K +
Sbjct: 44 SKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPAS 103
Query: 103 REDIRDVFISHTAQ--SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160
R D + + + + ++ + + SV G+++ + K
Sbjct: 104 RSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGK 163
Query: 161 L----NNNKAHAILL--AYAG--IKRLKKEKVIKEILNIEDFPPSPGQ 200
L N + G + + ++ ED P GQ
Sbjct: 164 LLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQ 211
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.126 0.341
Lambda K H
0.267 0.0383 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,137,203,588
Number of Sequences: 14124377
Number of extensions: 83818755
Number of successful extensions: 269382
Number of sequences better than 10.0: 2241
Number of HSP's better than 10.0 without gapping: 2208
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 262049
Number of HSP's gapped (non-prelim): 2384
length of query: 307
length of database: 4,842,793,630
effective HSP length: 138
effective length of query: 169
effective length of database: 2,893,629,604
effective search space: 489023403076
effective search space used: 489023403076
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.5 bits)