HHsearch alignment for GI: 254781038 and conserved domain: COG0068

>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].
Probab=99.42  E-value=7.3e-11  Score=95.05  Aligned_cols=228  Identities=18%  Similarity=0.303  Sum_probs=152.6

Q ss_pred             HHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC--CCEEEEEEC
Q ss_conf             999999838982245368740664301256779999999887514864333036776530132256799--843999706
Q gi|254781038|r   67 IKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAF--PYLVLLVSG  144 (363)
Q Consensus        67 i~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~--PfL~LlvSG  144 (363)
T Consensus       440 ~~~~~~~~~~~p---d~i~cDlHP~y~tt-----~~A~e----~~~~~~~VqHH~AH~~a~mae~~~~~~~~vi~ia~DG  507 (750)
T COG0068         440 LRHFLKIYDFEP---DYIVCDLHPNYNTT-----KYAEE----FALPLLQVQHHHAHALAVMAEHGLPLDEKVIGIALDG  507 (750)
T ss_pred             HHHHHHHHCCCC---CEEEEECCCCCCHH-----HHHHH----HCCCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECC
T ss_conf             999998716897---64887257652114-----67776----1564013105678889886056788777569999658


Q ss_pred             -----------CCEEEEEECCCC-------------------------------------CC----------------E-
Q ss_conf             -----------874799983756-------------------------------------43----------------0-
Q gi|254781038|r  145 -----------GHTQILLVRDVA-------------------------------------HY----------------D-  159 (363)
Q Consensus       145 -----------GhT~l~~~~~~~-------------------------------------~~----------------~-  159 (363)
T Consensus       508 ~GyG~dGk~WGGE~l~~d~~~~erlahl~~~~L~GGd~Aik~P~R~~ls~l~~~~~~~~k~~~~~~~e~~~~~l~~~~e~  587 (750)
T COG0068         508 VGYGEDGKVWGGEFLVIDYKEYERLAHLEYVDLPGGDLAIKYPLRMALSILLRFFLKLIKNYNEKYGELELKVLAQALEK  587 (750)
T ss_pred             CCCCCCCCEECCEEEEECCHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             53255676315158963127664303676210689852343458899999987316889851634333457889999871


Q ss_pred             ECCCCCCCCHHHHHHHHHHHCCC----CCCH--HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             00223363002388889885288----7610--35566655405733345861110688754221024589999998511
Q gi|254781038|r  160 RLGTTIDDALGECFDKIAKSLGL----PYPG--GVEIEKAALMGDGKRFKFPCPLVQGTLCDFSFSGLKTSVQKTICAFD  233 (363)
Q Consensus       160 ilg~T~Dda~Ge~~DK~ar~Lgl----~yPg--Gp~ie~~A~~g~~~~~~~P~p~~~~~~~dFSFSGLkTav~~~i~~~~  233 (363)
T Consensus       588 gin~p~tSS~GRlfDAvaalLgi~~~~tYEGE~A~~LEa~a~~~~~~~~~~~~~~~~~~vld-----~~~~~~~~l~~~-  661 (750)
T COG0068         588 GINAPLTSSIGRVFDAVAALLGICETRTYEGEAAMALEALADQSDGVDYPYEIKNEDNQVLD-----LKELILGVLEDL-  661 (750)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCCCCEECCCCCCEEE-----HHHHHHHHHHHH-
T ss_conf             46873101422889999998744110444240466579766210367666201157761766-----999999999986-


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCC
Q ss_conf             20121068899999999999999999999999876214455236541334587999999999998689889962878877
Q gi|254781038|r  234 VLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCT  313 (363)
Q Consensus       234 ~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ct  313 (363)
T Consensus       662 --~~~~~~~iA~~fh~~la~~~~e~~~~~a~------~~gi~~V~lsGGVf~N~~l~~~~~~~lk~~~f~~~~~~~~P~~  733 (750)
T COG0068         662 --LKDEPEKIATKFHNALAEGFAELAVELAK------KYGINKVVLSGGVFQNRLLLERLAKYLKKEGFRFLFHQEVPAG  733 (750)
T ss_pred             --HCCCHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCEEEEECCEEECHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             --03778899999999999999999999998------6594279972776414999999999997539267650466999


Q ss_pred             CHHHHHH
Q ss_conf             2589999
Q gi|254781038|r  314 DNAVMIA  320 (363)
Q Consensus       314 DNAaMIA  320 (363)
T Consensus       734 DggIslG  740 (750)
T COG0068         734 DGGISLG  740 (750)
T ss_pred             CCCEEHH
T ss_conf             9844488