HHsearch alignment for GI: 254781038 and conserved domain: PRK09604
>PRK09604 putative DNA-binding/iron metalloprotein/AP endonuclease; Reviewed.
Probab=100.00 E-value=0 Score=872.41 Aligned_cols=334 Identities=49% Similarity=0.813 Sum_probs=322.5
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
T Consensus 1 m~iLgIETSCDdTsvaiv~---~~~~il~~~~~sq~~~h~~~GGvvPe~Asr~H~~~i~~lv~~al~~a~i~~~~id~IA 77 (335)
T PRK09604 1 MLILGIESSCDETGVAIVD---NGRKILANVVASQIEEHARYGGVVPELASRHHVEALPPLLEEALKEAGLSLEDIDAIA 77 (335)
T ss_pred CEEEEEECCCCCEEEEEEE---CCCCEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEE
T ss_conf 9499998772001799997---9891889877601332268799990999999999999999999986599987897899
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEECCCCC
Q ss_conf 40664301256779999999887514864333036776530132256799843999706874799983756430002233
Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVAHYDRLGTTI 165 (363)
Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~ 165 (363)
T Consensus 78 vT~gPGL~g~L~VG~~~Ak~La~~~~~Pli~VnH~~gHi~~~~l~~~~~~Pfl~LlvSGGhT~l~~~~~~~~~~ilG~T~ 157 (335)
T PRK09604 78 VTAGPGLVGALLVGATAAKALALALNKPLIGVNHLEGHLLAARLEKPLEFPFLALLVSGGHTQLVAVKGVGDYEILGETL 157 (335)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEC
T ss_conf 94799961139999999999999809982411257777766540468999858999806846999984797479987761
Q ss_pred CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 63002388889885288761035566655405733345861110688754221024589999998511201210688999
Q gi|254781038|r 166 DDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCDFSFSGLKTSVQKTICAFDVLEKQDIADICA 245 (363)
Q Consensus 166 Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaa 245 (363)
T Consensus 158 Dda~GeafDKvar~LGL~yPgGp~ie~lA~~g~~~~~~~P~~~~~~~~~dfSFSGlkTav~~~i~~~~~-~~~~~~diaa 236 (335)
T PRK09604 158 DDAAGEAFDKVARLLGLGYPGGPKIDKLAEKGDPEAFDFPRPMKGRPGLDFSFSGLKTAVLNLIEKNKQ-KEQTKADIAA 236 (335)
T ss_pred CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-CCCCHHHHHH
T ss_conf 551177899999872999998669999998289231277842038998756141099999999985444-5566999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHHH
Q ss_conf 99999999999999999999876214455236541334587999999999998689889962878877258999999999
Q gi|254781038|r 246 SFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWAALE 325 (363)
Q Consensus 246 sfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag~~ 325 (363)
T Consensus 237 sfQ~~i~~~L~~k~~~A~~~~------~~k~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag~~ 310 (335)
T PRK09604 237 SFQEAVVDVLVEKTKRALKKT------GVKTLVVAGGVAANSYLREKLAELCKKRGIEVYIPPLELCTDNGAMIAYAGAE 310 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------CCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHH
T ss_conf 999999999999999999997------99879994647777999999999999749989808979751479999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9984999887620023578787577
Q gi|254781038|r 326 RMEAGLPADDLSISPRSRWPLDEKA 350 (363)
Q Consensus 326 ~~~~g~~~~~~~~~~~~rw~ld~~a 350 (363)
T Consensus 311 ~~~~g~-~~~l~~~~~prw~ld~~~ 334 (335)
T PRK09604 311 RYKKGP-FSPLDLNVRPRWPLDEVP 334 (335)
T ss_pred HHHCCC-CCCCCCCCCCCCCCCCCC
T ss_conf 997599-999976223799721288