HHsearch alignment for GI: 254781038 and conserved domain: PRK10640
>PRK10640 rhaB rhamnulokinase; Provisional.
Probab=95.59 E-value=0.14 Score=31.03 Aligned_cols=194 Identities=14% Similarity=0.156 Sum_probs=98.6
Q ss_pred HHCCCCCCC-HHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCC--------------------CCEECCCCCCC
Q ss_conf 514864333-036776530132256799843999706874799983756--------------------43000223363
Q gi|254781038|r 109 VSHKPFYAI-NHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVA--------------------HYDRLGTTIDD 167 (363)
Q Consensus 109 ~~~~Pli~V-nH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~--------------------~~~ilg~T~Dd 167 (363)
T Consensus 207 ~~~ipVi~~~ghDtasA~~g---~~~~~~-g~a~~s~GTwsl~g~~~~~P~~~~~~~~~~~tnegg~~g~~~~l~ni--- 279 (471)
T PRK10640 207 GNRIPVVAVASHDTASAVIA---SPLNDS-RAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNI--- 279 (471)
T ss_pred CCCCCEEEECCCCHHHHHHC---CCCCCC-CCEEEECCEEEEEECCCCCCCCCHHHHEECCCEECCCCCEEEHHHHH---
T ss_conf 36797899827518878742---666789-85798147447850357987458067412340541776346478779---
Q ss_pred CHH-HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 002-388889885288761035566655405733345861110688754221-024589999998511201210688999
Q gi|254781038|r 168 ALG-ECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCDFSF-SGLKTSVQKTICAFDVLEKQDIADICA 245 (363)
Q Consensus 168 a~G-e~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~dFSF-SGLkTav~~~i~~~~~~~~~~~~diaa 245 (363)
T Consensus 280 -~glWl~~~~~~e~~~~--d~~~l~~~a~~~p--~~~~---li~p~~~~f~~p~~m~~~i~~~~~~tG~~~~~t~g~l~R 351 (471)
T PRK10640 280 -MGLWLLQRVLQERQIT--DLPALIAQTQALP--ACRF---LINPNDDRFINPDSMCSEIQAACRETAQPVPESDAELAR 351 (471)
T ss_pred -HHHHHHHHHHHHCCCC--CHHHHHHHHHCCC--CCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf -9999999998851545--0999999864388--7561---106997444483006899999999819988898899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHH
Q ss_conf 9999999999999999999987621445523654133458799999999999868988996287887725899999999
Q gi|254781038|r 246 SFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWAAL 324 (363)
Q Consensus 246 sfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag~ 324 (363)
T Consensus 352 a----vlEslA~~~r~~l~~le~~tG~~~~~l~vvGGGsrn~ll~Q~~ADi~---g~pVv~g~~EaTalGn~~~q~~a~ 423 (471)
T PRK10640 352 C----IFDSLALLYADVLHELAQLRGEPFSQLHIVGGGCQNALLNQLCADAC---GIRVIAGPVEASTLGNIGIQLMTL 423 (471)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH---CCCEECCCCHHHHHHHHHHHHHHC
T ss_conf 9----99999999999999999962999676999785766599999989982---996652870587999999999976