HHsearch alignment for GI: 254781038 and conserved domain: PRK10640

>PRK10640 rhaB rhamnulokinase; Provisional.
Probab=95.59  E-value=0.14  Score=31.03  Aligned_cols=194  Identities=14%  Similarity=0.156  Sum_probs=98.6

Q ss_pred             HHCCCCCCC-HHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCC--------------------CCEECCCCCCC
Q ss_conf             514864333-036776530132256799843999706874799983756--------------------43000223363
Q gi|254781038|r  109 VSHKPFYAI-NHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVA--------------------HYDRLGTTIDD  167 (363)
Q Consensus       109 ~~~~Pli~V-nH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~--------------------~~~ilg~T~Dd  167 (363)
T Consensus       207 ~~~ipVi~~~ghDtasA~~g---~~~~~~-g~a~~s~GTwsl~g~~~~~P~~~~~~~~~~~tnegg~~g~~~~l~ni---  279 (471)
T PRK10640        207 GNRIPVVAVASHDTASAVIA---SPLNDS-RAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNI---  279 (471)
T ss_pred             CCCCCEEEECCCCHHHHHHC---CCCCCC-CCEEEECCEEEEEECCCCCCCCCHHHHEECCCEECCCCCEEEHHHHH---
T ss_conf             36797899827518878742---666789-85798147447850357987458067412340541776346478779---


Q ss_pred             CHH-HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf             002-388889885288761035566655405733345861110688754221-024589999998511201210688999
Q gi|254781038|r  168 ALG-ECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCDFSF-SGLKTSVQKTICAFDVLEKQDIADICA  245 (363)
Q Consensus       168 a~G-e~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~dFSF-SGLkTav~~~i~~~~~~~~~~~~diaa  245 (363)
T Consensus       280 -~glWl~~~~~~e~~~~--d~~~l~~~a~~~p--~~~~---li~p~~~~f~~p~~m~~~i~~~~~~tG~~~~~t~g~l~R  351 (471)
T PRK10640        280 -MGLWLLQRVLQERQIT--DLPALIAQTQALP--ACRF---LINPNDDRFINPDSMCSEIQAACRETAQPVPESDAELAR  351 (471)
T ss_pred             -HHHHHHHHHHHHCCCC--CHHHHHHHHHCCC--CCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf             -9999999998851545--0999999864388--7561---106997444483006899999999819988898899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHH
Q ss_conf             9999999999999999999987621445523654133458799999999999868988996287887725899999999
Q gi|254781038|r  246 SFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWAAL  324 (363)
Q Consensus       246 sfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag~  324 (363)
T Consensus       352 a----vlEslA~~~r~~l~~le~~tG~~~~~l~vvGGGsrn~ll~Q~~ADi~---g~pVv~g~~EaTalGn~~~q~~a~  423 (471)
T PRK10640        352 C----IFDSLALLYADVLHELAQLRGEPFSQLHIVGGGCQNALLNQLCADAC---GIRVIAGPVEASTLGNIGIQLMTL  423 (471)
T ss_pred             H----HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH---CCCEECCCCHHHHHHHHHHHHHHC
T ss_conf             9----99999999999999999962999676999785766599999989982---996652870587999999999976