HHsearch alignment of GI: 254781038 and MMDB domain: 1hjr_A_
>1hjr_A (A:) Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli}
Probab=96.28 E-value=0.065 Score=32.83 Aligned_cols=108 Identities=9% Similarity=0.114 Sum_probs=77.9
Q ss_pred EEEEEECCCHHHEEEEEECCCCCCEEEEE-EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 68875026022077887338888418988-73113346212187145599999999699999999998389822453687
Q gi|254781038|r 7 TVIGIETSCDETAVAVVRRKDSHGEILAE-AVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 7 ~ILgIETScd~tsvaiv~~~~~~~~il~~-~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
.|||||-|---|+.|+++.++...+++.. .+.+..... .+....|..-+.+.+++.+.+.--|..+.
T Consensus 2 rvLgiDpg~~~tG~av~~~~~~~~~~i~~g~i~~~~~~~------------~~R~~~i~~~l~~~l~~~~p~~v~iE~~~ 69 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDL------------PSRLKLIYAGVTEIITQFQPDYFAIEQVF 69 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCH------------HHHHHHHHHHHHHHHHHHCCSEEEEEECC
T ss_pred EEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCH------------HHHHHHHHHHHHHHHHCCCCCEEEEEEHH
T ss_conf 899984577846899999669978999953484598777------------99999999999999863598669998412
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
Q ss_conf 40664301256779999999887514864333036776530
Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363)
Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363)
++..+.....|.-........+...++|++.|+..+-.-..
T Consensus 70 ~~~~~~s~~~l~~~~G~i~~~~~~~~ipi~~v~P~~vKk~~ 110 (158)
T 1hjr_A 70 MAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTV 110 (158)
T ss_dssp CCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHH
T ss_conf 21573578889999999999999759738997689988761