HHsearch alignment of GI: 254781038 and MMDB domain: 3jvp_A_279-473
>3jvp_A (A:279-473) Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans}
Probab=95.53 E-value=0.2 Score=29.42 Aligned_cols=150 Identities=13% Similarity=0.063 Sum_probs=80.1
Q ss_pred EEEEECCCEEEEEEC-CC--CCCEECC-------------CCCCCCHHHHHHHHHHHCCCCCC-----------HHHHHH
Q ss_conf 999706874799983-75--6430002-------------23363002388889885288761-----------035566
Q gi|254781038|r 139 VLLVSGGHTQILLVR-DV--AHYDRLG-------------TTIDDALGECFDKIAKSLGLPYP-----------GGVEIE 191 (363)
Q Consensus 139 ~LlvSGGhT~l~~~~-~~--~~~~ilg-------------~T~Dda~Ge~~DK~ar~Lgl~yP-----------gGp~ie 191 (363)
-+.+|-|++..+.+- +. .+.+.-+ +..=-..|-++|.+.+.+...-- -....+
T Consensus 11 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (195)
T 3jvp_A 11 KLVMAMGTSICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEE 90 (195)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHH
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
T ss_conf 23898478765576566542147765023224457503555422035269999987143057799999827633456777
Q ss_pred HHHHHCCCCCCCCCCHHCCC-------CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65540573334586111068-------87542210245899999985112012106889999999999999999999999
Q gi|254781038|r 192 KAALMGDGKRFKFPCPLVQG-------TLCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFL 264 (363)
Q Consensus 192 ~~A~~g~~~~~~~P~p~~~~-------~~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~ 264 (363)
+++.......-.+..|...+ ....=+|.|++. ..++.++..++.+.++-.+ +..++
T Consensus 91 ~~~~~~~~~~gl~~~p~~~G~~~p~~~~~~~~~~~Gl~~-------------~~~~~~~~ra~~Egia~~~----~~~~~ 153 (195)
T 3jvp_A 91 KASQLRPGESGLLALDWWNGNRSILVDTELSGMLLGYTL-------------QTKPEEIYRALLEATAFGT----RAIVD 153 (195)
T ss_dssp HHTSSCTTSSCCEEECCTTCCCTTTCCSSCCEEEEEECT-------------TCCHHHHHHHHHHHHHHHH----HHHHH
T ss_pred HHHHCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCC-------------CCCHHHHHHHHHHHHHHHH----HHHHH
T ss_conf 765338877760353022113577654233303578887-------------7758999999999999999----99999
Q ss_pred HHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 98762144552365413345879999999999986898899628
Q gi|254781038|r 265 LFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 265 ~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
..++.....++.++++||.+.|..+++.+.++. |.++..|.
T Consensus 154 ~l~~~~~~~~~~i~~~GG~s~n~~~~Qi~Adi~---g~pv~~~~ 194 (195)
T 3jvp_A 154 AFHGRGVEVHELYACGGLPQKNHLLMQIFADVT---NREIKVAA 194 (195)
T ss_dssp HHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH---TSCEEEBC
T ss_pred HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH---CCEEEECC
T ss_conf 998539997679997287301889999999988---98379578