Query gi|254781038|ref|YP_003065451.1| putative DNA-binding/iron metalloprotein/AP endonuclease [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 363
No_of_seqs 183 out of 2943
Neff 6.1
Searched_HMMs 33803
Date Wed Jun 1 20:49:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781038.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >3eno_A Putative O-sialoglycop 100.0 1.3E-37 4E-42 279.1 16.0 120 2-128 2-121 (173)
2 >2ivn_A O-sialoglycoprotein en 100.0 7.9E-37 2.3E-41 273.8 16.5 116 6-128 1-116 (166)
3 >3en9_A Glycoprotease, O-sialo 100.0 1.9E-35 5.6E-40 264.2 15.6 118 2-127 2-119 (165)
4 >2ews_A Pantothenate kinase; P 100.0 7.9E-33 2.3E-37 246.2 11.5 161 134-309 2-166 (167)
5 >2ivn_A O-sialoglycoprotein en 100.0 1.2E-30 3.5E-35 231.2 18.0 162 135-311 3-164 (164)
6 >3en9_A Glycoprotease, O-sialo 100.0 5.7E-30 1.7E-34 226.5 18.5 161 135-311 1-161 (161)
7 >2i7n_A Pantothenate kinase 1; 100.0 1.9E-32 5.7E-37 243.5 5.4 185 111-310 4-199 (199)
8 >3eno_A Putative O-sialoglycop 100.0 2.5E-27 7.4E-32 208.2 16.6 160 136-311 2-161 (161)
9 >2gel_A Putative GRAM negative 99.8 6E-21 1.8E-25 164.2 9.8 102 6-127 1-102 (135)
10 >1hux_A Activator of (R)-2-hyd 99.8 3.6E-19 1.1E-23 151.9 9.2 138 138-302 4-142 (143)
11 >2a6a_A Hypothetical protein T 99.8 6.1E-19 1.8E-23 150.4 9.7 97 5-122 12-108 (149)
12 >2dpn_A Glycerol kinase; therm 97.4 0.0096 2.8E-07 38.6 12.7 140 164-325 60-207 (254)
13 >2zf5_O Glycerol kinase; hyper 97.1 0.02 6.1E-07 36.3 12.3 142 162-326 57-206 (259)
14 >2p3r_A Glycerol kinase; glyce 97.0 0.036 1.1E-06 34.6 23.3 296 4-327 1-453 (510)
15 >3g25_A Glycerol kinase; IDP00 96.9 0.042 1.3E-06 34.1 13.4 142 163-325 59-208 (255)
16 >1hux_A Activator of (R)-2-hyd 96.7 0.0092 2.7E-07 38.7 7.7 105 4-127 1-111 (127)
17 >3h3n_X Glycerol kinase; ATP-b 96.7 0.059 1.7E-06 33.1 13.3 140 163-325 60-209 (262)
18 >3h3n_X Glycerol kinase; ATP-b 96.6 0.021 6.3E-07 36.2 8.8 80 1-88 1-82 (107)
19 >3gbt_A Gluconate kinase; LBA0 96.5 0.072 2.1E-06 32.5 12.4 167 139-326 17-207 (267)
20 >2uyt_A Rhamnulokinase; rhamno 96.5 0.08 2.4E-06 32.2 16.4 82 236-324 125-206 (254)
21 >3cqy_A Anhydro-N-acetylmurami 96.4 0.029 8.7E-07 35.2 8.7 158 113-298 2-169 (180)
22 >2itm_A Xylulose kinase, xylul 96.4 0.087 2.6E-06 32.0 11.4 164 140-325 18-206 (253)
23 >1hjr_A Holliday junction reso 96.3 0.065 1.9E-06 32.8 9.8 108 7-126 2-110 (158)
24 >2zf5_O Glycerol kinase; hyper 96.2 0.055 1.6E-06 33.3 9.1 79 4-87 1-79 (238)
25 >2ch5_A NAGK protein; transfer 96.2 0.095 2.8E-06 31.7 10.3 110 2-125 2-116 (153)
26 >3g25_A Glycerol kinase; IDP00 96.1 0.057 1.7E-06 33.2 9.0 81 4-89 4-84 (109)
27 >3ifr_A Carbohydrate kinase, F 96.1 0.12 3.5E-06 31.0 12.3 164 139-323 18-206 (266)
28 >3hz6_A Xylulokinase; xylulose 95.7 0.18 5.5E-06 29.7 13.5 162 140-324 18-211 (270)
29 >2w40_A Glycerol kinase, putat 95.6 0.19 5.5E-06 29.7 12.8 139 164-324 62-209 (256)
30 >3jvp_A Ribulokinase; PSI-II, 95.5 0.2 6E-06 29.4 11.8 150 139-308 11-194 (195)
31 >1zc6_A Probable N-acetylgluco 95.1 0.19 5.7E-06 29.6 8.4 78 3-92 8-86 (147)
32 >1z05_A Transcriptional regula 95.0 0.17 5.1E-06 30.0 7.9 97 4-115 1-108 (111)
33 >3ifr_A Carbohydrate kinase, F 94.9 0.11 3.3E-06 31.2 6.8 82 1-88 3-84 (242)
34 >3l0q_A Xylulose kinase; xlylu 94.8 0.21 6.2E-06 29.4 8.0 81 3-88 2-82 (297)
35 >3i8b_A Xylulose kinase; strai 94.8 0.32 9.4E-06 28.1 8.8 110 3-127 2-134 (163)
36 >2qm1_A Glucokinase; alpha-bet 94.7 0.21 6.3E-06 29.3 7.9 111 5-128 5-126 (150)
37 >2hoe_A N-acetylglucosamine ki 94.2 0.21 6.2E-06 29.3 6.8 111 6-130 2-123 (149)
38 >2w40_A Glycerol kinase, putat 94.0 0.35 1E-05 27.8 7.7 81 5-90 3-85 (110)
39 >2d4w_A Glycerol kinase; alpha 94.0 0.48 1.4E-05 26.8 10.8 139 166-325 63-209 (260)
40 >3jvp_A Ribulokinase; PSI-II, 93.7 0.29 8.5E-06 28.4 6.7 89 1-96 1-103 (224)
41 >1z6r_A MLC protein; transcrip 93.5 0.25 7.5E-06 28.8 6.2 99 5-117 2-111 (112)
42 >2d4w_A Glycerol kinase; alpha 93.0 0.69 2E-05 25.8 7.8 78 6-88 2-79 (244)
43 >3hz6_A Xylulokinase; xylulose 93.0 0.7 2.1E-05 25.7 8.8 80 3-88 2-81 (241)
44 >2e2o_A Hexokinase; acetate an 92.7 0.77 2.3E-05 25.5 10.0 56 244-305 111-166 (169)
45 >3eo3_A Bifunctional UDP-N-ace 92.7 0.39 1.1E-05 27.5 6.2 113 3-130 17-141 (163)
46 >2e2o_A Hexokinase; acetate an 89.9 1.5 4.3E-05 23.5 8.2 105 6-130 2-106 (130)
47 >3l0q_A Xylulose kinase; xlylu 89.6 1.5 4.5E-05 23.4 8.5 151 140-308 4-196 (197)
48 >1saz_A Probable butyrate kina 89.1 1.7 4.9E-05 23.1 6.6 57 251-307 101-158 (160)
49 >2ap1_A Putative regulator pro 88.6 1.1 3.3E-05 24.3 5.4 108 3-128 21-138 (143)
50 >1woq_A Inorganic polyphosphat 88.4 1.8 5.4E-05 22.9 7.7 115 3-129 9-133 (143)
51 >1saz_A Probable butyrate kina 88.4 1.8 5.4E-05 22.8 9.8 75 6-89 2-76 (221)
52 >1z6r_A MLC protein; transcrip 87.9 1.8 5.2E-05 22.9 6.1 29 273-301 140-169 (187)
53 >3gbt_A Gluconate kinase; LBA0 86.4 2.4 7E-05 22.1 7.2 76 5-88 3-78 (237)
54 >3epq_A Putative fructokinase; 85.1 2.5 7.4E-05 21.9 5.6 103 5-127 2-114 (147)
55 >2dpn_A Glycerol kinase; therm 82.8 3.4 1E-04 21.0 8.7 77 6-87 2-78 (241)
56 >3khy_A Propionate kinase; csg 82.2 2.1 6.3E-05 22.4 4.3 53 251-304 134-187 (212)
57 >3htv_A D-allose kinase, allok 81.8 3.7 0.00011 20.8 7.1 111 2-130 3-127 (156)
58 >3h6e_A Carbohydrate kinase, F 81.1 2.5 7.4E-05 21.9 4.3 159 139-324 6-191 (236)
59 >2d0o_A DIOL dehydratase-react 80.8 4 0.00012 20.5 10.0 92 6-115 2-94 (131)
60 >2itm_A Xylulose kinase, xylul 80.4 4.1 0.00012 20.5 8.7 76 7-89 1-76 (231)
61 >3gwa_A 3-oxoacyl-(acyl-carrie 79.8 2.1 6.3E-05 22.4 3.6 63 60-122 46-108 (168)
62 >1z05_A Transcriptional regula 79.4 4.4 0.00013 20.2 6.5 30 273-302 141-171 (186)
63 >2e1z_A Propionate kinase; TDC 78.1 4.8 0.00014 20.0 5.1 145 135-304 37-189 (220)
64 >2hoe_A N-acetylglucosamine ki 78.0 3.4 1E-04 21.0 4.2 32 273-304 103-135 (146)
65 >3kzu_A 3-oxoacyl-(acyl-carrie 77.7 4.9 0.00015 19.9 6.3 32 49-80 75-108 (428)
66 >3lma_A Stage V sporulation pr 76.7 4.5 0.00013 20.2 4.5 65 55-126 38-102 (164)
67 >2vu1_A Acetyl-COA acetyltrans 75.9 3.9 0.00012 20.6 4.0 63 59-121 27-89 (392)
68 >2ib8_A Acetyl-COA acetyltrans 75.9 3.5 0.0001 20.9 3.8 72 45-120 21-93 (395)
69 >3gwa_A 3-oxoacyl-(acyl-carrie 75.7 5.5 0.00016 19.5 5.0 101 18-127 13-123 (162)
70 >2aa4_A Mannac kinase, putativ 74.6 5.9 0.00017 19.3 8.0 101 6-126 1-112 (134)
71 >2iik_A 3-ketoacyl-COA thiolas 73.3 6.3 0.00019 19.1 5.3 63 60-122 56-118 (418)
72 >1ulq_A Putative acetyl-COA ac 72.8 6.5 0.00019 19.1 4.5 64 59-122 26-90 (401)
73 >16pk_A PGK, 3-phosphoglycerat 70.8 4.3 0.00013 20.3 3.2 10 312-321 188-197 (212)
74 >2qm1_A Glucokinase; alpha-bet 70.2 7.4 0.00022 18.7 5.0 53 244-302 108-161 (176)
75 >1im4_A DBH; DNA polymerase PA 70.0 2.4 7.1E-05 22.0 1.8 32 276-307 76-107 (107)
76 >1vpe_A Phosphoglycerate kinas 68.6 4.7 0.00014 20.0 3.1 23 100-122 40-62 (216)
77 >3il6_A 3-oxoacyl-[acyl-carrie 68.5 7.1 0.00021 18.8 4.0 58 51-117 14-72 (138)
78 >3il3_A 3-oxoacyl-[acyl-carrie 67.8 8.2 0.00024 18.3 4.2 59 60-122 25-86 (289)
79 >2kho_A Heat shock protein 70; 66.6 8.7 0.00026 18.2 5.1 80 5-98 5-84 (96)
80 >2aa4_A Mannac kinase, putativ 64.3 9.6 0.00028 17.9 4.5 29 273-301 114-142 (155)
81 >1jx4_A DNA polymerase IV (fam 63.9 5.6 0.00017 19.5 2.7 32 276-307 70-101 (115)
82 >1v6s_A Phosphoglycerate kinas 63.5 5.6 0.00017 19.5 2.7 22 100-121 40-61 (200)
83 >1e4f_T Cell division protein 63.3 9.9 0.00029 17.8 8.1 82 1-91 1-85 (108)
84 >2gup_A ROK family protein; su 63.0 10 0.0003 17.7 8.7 27 273-299 113-139 (158)
85 >7aat_A Aspartate aminotransfe 62.2 10 0.00031 17.6 4.1 34 197-230 26-60 (180)
86 >1sz2_A Glucokinase, glucose k 61.5 11 0.00032 17.6 5.6 104 4-130 12-122 (141)
87 >1nbw_A Glycerol dehydratase r 61.0 11 0.00032 17.5 6.1 99 6-123 2-100 (124)
88 >3h78_A PQS biosynthetic enzym 60.9 11 0.00032 17.5 5.4 64 55-127 51-117 (162)
89 >2q7w_A Aspartate aminotransfe 60.8 11 0.00031 17.6 3.7 22 209-231 122-144 (176)
90 >2c7y_A 3-ketoacyl-COA thiolas 60.0 11 0.00034 17.4 5.4 63 60-122 39-102 (404)
91 >1afw_A 3-ketoacetyl-COA thiol 58.9 9.3 0.00028 18.0 3.1 120 61-184 41-177 (393)
92 >3ga2_A Endonuclease V; alpha- 58.5 8.7 0.00026 18.2 2.9 134 5-157 12-157 (219)
93 >3htv_A D-allose kinase, allok 58.4 3.9 0.00011 20.6 1.1 37 273-309 108-145 (154)
94 >3i8b_A Xylulose kinase; strai 53.0 15 0.00043 16.6 9.7 131 140-293 5-160 (172)
95 >3cqy_A Anhydro-N-acetylmurami 51.0 16 0.00046 16.4 10.0 112 3-116 2-132 (190)
96 >3bzc_A TEX; helix-turn-helix, 50.9 16 0.00047 16.4 9.5 98 6-125 4-102 (142)
97 >2e1z_A Propionate kinase; TDC 50.7 13 0.00039 17.0 2.8 160 1-191 13-181 (195)
98 >1zow_A 3-oxoacyl-[acyl-carrie 50.6 16 0.00047 16.4 6.9 65 54-127 35-102 (143)
99 >3eeq_A Putative cobalamin bio 50.4 16 0.00047 16.3 4.7 82 61-155 14-107 (127)
100 >1wl4_A Acetyl-coenzyme A acet 49.6 16 0.00049 16.3 4.4 62 60-122 31-93 (397)
101 >2q2r_A Glucokinase 1, putativ 49.3 12 0.00037 17.1 2.5 107 5-127 28-145 (170)
102 >2h3g_X Biosynthetic protein; 49.0 17 0.0005 16.2 8.1 86 8-117 2-88 (121)
103 >2ywj_A Glutamine amidotransfe 49.0 17 0.0005 16.2 4.1 49 77-127 34-82 (186)
104 >2q7t_A Protein TRAI, DNA heli 48.9 15 0.00045 16.5 2.8 86 164-257 25-116 (248)
105 >1vhx_A Putative holliday junc 48.5 17 0.00051 16.2 6.3 91 5-118 2-97 (150)
106 >3bq0_A POL IV, DBH, DNA polym 47.3 8.7 0.00026 18.2 1.4 33 276-308 71-103 (111)
107 >1zow_A 3-oxoacyl-[acyl-carrie 45.4 19 0.00056 15.8 4.5 66 61-127 53-118 (170)
108 >3goa_A 3-ketoacyl-COA thiolas 44.8 19 0.00057 15.8 5.2 62 60-121 28-91 (387)
109 >3gqc_A DNA repair protein REV 44.3 17 0.00051 16.1 2.6 33 276-308 158-190 (198)
110 >1vkr_A Mannitol-specific PTS 44.1 20 0.00058 15.7 2.8 27 276-302 17-43 (125)
111 >3gv5_B DNA polymerase IOTA; Y 43.9 7.9 0.00023 18.5 0.8 50 251-308 115-164 (178)
112 >3hhd_A Fatty acid synthase; t 43.6 20 0.0006 15.6 5.1 38 45-82 64-103 (416)
113 >1tvm_A PTS system, galactitol 43.5 20 0.0006 15.6 3.3 32 276-307 25-56 (95)
114 >1t94_A Polymerase (DNA direct 43.3 13 0.00038 17.0 1.8 32 276-307 148-179 (179)
115 >1tqy_B Actinorhodin polyketid 43.3 20 0.00061 15.6 5.6 23 60-82 80-102 (415)
116 >1e4f_T Cell division protein 43.1 21 0.00061 15.6 9.2 174 128-322 10-186 (230)
117 >3czc_A RMPB; alpha/beta sandw 42.3 21 0.00063 15.5 3.0 28 276-303 22-49 (110)
118 >3js6_A Uncharacterized PARM p 41.2 22 0.00065 15.4 11.7 135 137-308 6-140 (141)
119 >1php_A 3-phosphoglycerate kin 40.3 17 0.00051 16.1 2.1 25 99-123 37-61 (209)
120 >1dkg_D Molecular chaperone DN 40.0 23 0.00068 15.3 8.8 38 60-97 47-84 (97)
121 >1tqy_A Beta-ketoacyl synthase 39.2 24 0.0007 15.2 6.1 32 60-91 74-105 (424)
122 >2gqd_A 3-oxoacyl-[acyl-carrie 38.8 24 0.00071 15.2 6.4 22 61-82 100-121 (437)
123 >3fk5_A 3-oxoacyl-synthase III 37.9 25 0.00073 15.1 4.1 69 59-127 61-129 (338)
124 >2pgn_A Cyclohexane-1,2-dione 37.5 25 0.00074 15.0 4.5 18 100-117 40-57 (190)
125 >1jih_A DNA polymerase ETA; tr 37.4 17 0.00051 16.1 1.7 46 251-304 89-134 (137)
126 >3epq_A Putative fructokinase; 37.3 25 0.00074 15.0 5.8 28 273-300 104-131 (155)
127 >2c4m_A Glycogen phosphorylase 37.1 24 0.00071 15.1 2.4 56 62-118 36-91 (422)
128 >1g99_A Acetate kinase; alpha/ 36.9 25 0.00075 15.0 5.9 38 273-312 158-196 (219)
129 >3eo3_A Bifunctional UDP-N-ace 35.9 26 0.00078 14.8 9.5 27 273-299 130-158 (170)
130 >1x1q_A Tryptophan synthase be 35.8 16 0.00047 16.4 1.3 30 167-196 103-133 (134)
131 >1zc6_A Probable N-acetylgluco 35.5 27 0.00079 14.8 2.5 28 271-298 128-156 (158)
132 >2aq4_A DNA repair protein REV 35.5 21 0.00063 15.5 1.9 32 277-308 129-160 (168)
133 >3i33_A Heat shock-related 70 33.7 28 0.00084 14.6 7.4 64 2-86 2-65 (70)
134 >1u6e_A 3-oxoacyl-[acyl-carrie 32.0 30 0.0009 14.4 5.1 63 56-127 47-113 (155)
135 >2ebd_A 3-oxoacyl-[acyl-carrie 31.8 31 0.00091 14.4 6.7 62 57-127 36-100 (139)
136 >1ub7_A 3-oxoacyl-[acyl-carrie 30.6 32 0.00095 14.3 5.2 64 55-127 46-112 (154)
137 >2ebd_A 3-oxoacyl-[acyl-carrie 30.4 32 0.00095 14.3 4.6 67 60-127 51-117 (170)
138 >3lm2_A Putative kinase; struc 30.3 32 0.00096 14.2 4.6 39 273-326 83-121 (127)
139 >2iir_A Acetate kinase; transf 28.5 35 0.001 14.0 6.1 31 273-303 158-189 (221)
140 >2gj4_A Glycogen phosphorylase 28.2 31 0.00091 14.4 1.7 56 60-118 90-147 (504)
141 >1ygp_A Yeast glycogen phospho 28.2 35 0.001 14.0 2.3 58 60-118 131-188 (541)
142 >3goc_A Endonuclease V; alpha- 25.9 38 0.0011 13.7 3.3 38 78-118 105-142 (237)
143 >1wdk_C 3-ketoacyl-COA thiolas 25.8 39 0.0011 13.7 2.9 63 60-122 31-95 (390)
144 >1qop_B Tryptophan synthase be 25.7 27 0.0008 14.8 1.0 12 182-193 85-97 (101)
145 >2qo3_A Eryaii erythromycin po 25.7 39 0.0011 13.7 5.4 24 59-82 95-118 (489)
146 >3ke8_A 4-hydroxy-3-methylbut- 25.7 39 0.0011 13.7 3.3 54 239-307 21-74 (145)
147 >2f82_A HMG-COA synthase; HMGS 25.6 39 0.0012 13.7 4.6 61 61-123 54-118 (414)
148 >2vz8_A Fatty acid synthase; t 24.9 40 0.0012 13.6 3.3 20 63-82 82-101 (413)
149 >2gup_A ROK family protein; su 24.5 41 0.0012 13.6 6.8 97 5-125 3-109 (134)
150 >1ozh_A ALS, acetolactate synt 24.3 41 0.0012 13.5 4.0 19 100-118 38-56 (180)
151 >3h78_A PQS biosynthetic enzym 24.1 41 0.0012 13.5 5.0 62 61-127 76-138 (197)
152 >3hl0_A Maleylacetate reductas 23.7 42 0.0012 13.5 2.6 90 111-208 74-175 (194)
153 >3cf4_G Acetyl-COA decarbonyla 23.3 43 0.0013 13.4 4.0 34 275-308 36-69 (170)
154 >2ppv_A Uncharacterized protei 23.3 43 0.0013 13.4 2.1 15 164-178 163-177 (332)
155 >2q28_A Oxalyl-COA decarboxyla 23.1 43 0.0013 13.4 4.4 20 100-119 37-56 (177)
156 >2iwz_A 3-oxoacyl-[acyl-carrie 23.1 43 0.0013 13.4 6.5 33 49-81 85-119 (438)
157 >1pq4_A Periplasmic binding pr 23.0 43 0.0013 13.4 1.9 47 273-320 22-68 (82)
158 >2iht_A Carboxyethylarginine s 22.9 44 0.0013 13.4 3.9 32 277-308 34-65 (170)
159 >2hnh_A DNA polymerase III alp 22.8 44 0.0013 13.3 2.0 23 171-196 3-25 (65)
160 >1tzj_A ACC deaminase, 1-amino 22.6 44 0.0013 13.3 3.8 53 271-325 24-85 (124)
161 >3i4a_A N(G),N(G)-dimethylargi 22.3 45 0.0013 13.3 1.8 52 41-97 52-104 (113)
162 >1hnj_A Beta-ketoacyl-acyl car 22.2 45 0.0013 13.3 5.2 65 61-127 53-118 (317)
163 >1wf9_A NPL4 family protein; b 21.7 46 0.0014 13.2 4.1 43 143-185 3-46 (107)
164 >1e5m_A KAS II, beta ketoacyl 21.7 46 0.0014 13.2 6.0 22 61-82 79-100 (416)
165 >1zmr_A Phosphoglycerate kinas 21.5 46 0.0014 13.2 2.4 24 98-121 36-59 (192)
166 >2o2z_A Hypothetical protein; 21.1 47 0.0014 13.1 2.1 35 274-308 247-291 (323)
167 >2p0y_A Hypothetical protein L 20.6 48 0.0014 13.0 2.2 13 296-308 290-302 (341)
168 >2ch5_A NAGK protein; transfer 20.5 48 0.0014 13.0 10.1 27 275-301 148-175 (194)
169 >3h87_C Putative uncharacteriz 20.5 47 0.0014 13.1 1.4 22 282-303 25-46 (62)
170 >3ho9_A 3-oxoacyl-[acyl-carrie 20.3 49 0.0014 13.0 6.4 44 48-91 75-122 (427)
171 >1u6e_A 3-oxoacyl-[acyl-carrie 20.3 49 0.0014 13.0 4.4 58 61-123 63-124 (180)
172 >2w6k_A COBE; biosynthetic pro 20.3 49 0.0014 13.0 5.7 54 61-121 25-78 (145)
173 >3h1q_A Ethanolamine utilizati 20.2 49 0.0015 13.0 4.4 42 252-298 73-114 (119)
174 >1mzj_A Beta-ketoacylsynthase 20.1 49 0.0015 13.0 5.3 61 60-125 61-125 (339)
175 >2a9v_A GMP synthase; NP_39440 20.0 50 0.0015 13.0 3.0 50 77-128 51-100 (212)
No 1
>>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} (A:1-126,A:288-334)
Probab=100.00 E-value=1.3e-37 Score=279.07 Aligned_cols=120 Identities=32% Similarity=0.471 Sum_probs=111.0
Q ss_pred CCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 88884688750260220778873388884189887311334621218714559999999969999999999838982245
Q gi|254781038|r 2 SKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDM 81 (363)
Q Consensus 2 ~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~i 81 (363)
+.++|+|||||||||+||+||++ +++|+++... +.+.+++|++|++++++|.+++.++++++|++++++++||
T Consensus 2 sm~~M~ILgIeTS~~~~svAl~~----dg~il~~~~~---e~~~~~~g~~~~~a~~~H~~~l~~~i~~~L~~agi~~~di 74 (173)
T 3eno_A 2 AMDPMIVLGLEGTAHTISCGIID----ESRILAMESS---MYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDI 74 (173)
T ss_dssp CCCCCEEEEEECSSSEEEEEEEE----SSCCCEEEEE---ECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred CCCCCEEEEEECCCCCEEEEEEE----CCEEEEEEEE---EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 97685799997564311899998----9989899999---7227879867589999999999999999999759864120
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf 36874066430125677999999988751486433303677653013
Q gi|254781038|r 82 DSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTAR 128 (363)
Q Consensus 82 d~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~ 128 (363)
|+|+||.|||++++||||.++||+|+.++++|+++|||+++|+++++
T Consensus 75 D~Vavs~GPG~~t~Lrvg~~~ak~la~~~~~Plv~V~hl~aHa~s~~ 121 (173)
T 3eno_A 75 DLIGFSMGPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGR 121 (173)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 05774033565545046778988887522534203234999988754
No 2
>>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* (A:1-118,A:283-330)
Probab=100.00 E-value=7.9e-37 Score=273.79 Aligned_cols=116 Identities=28% Similarity=0.465 Sum_probs=109.2
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
|+|||||||||++|+||++ +++|+++...++ +.++||++|+.++|+|.+++.++++++|++++++++|||+|+
T Consensus 1 M~ILgIeTS~~~~svalv~----dg~il~~~~~~~---~~~~~g~~~~~~~~~Hs~~l~~~i~~~L~~agi~~~did~Ia 73 (166)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVS----EDKVLANVFDTL---TTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIA 73 (166)
T ss_dssp CCEEEEECSSSEEEEEEEC----SSCEEEEEEEEC---CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEE
T ss_pred CEEEEEECCCCCEEEEEEE----CCEEEEEEEEEE---ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 9199998566130899998----999999988864---447798381799999999999999999997399843142256
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf 4066430125677999999988751486433303677653013
Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTAR 128 (363)
Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~ 128 (363)
||.|||++++||||+++||+||+++++|+++|||+++|+++++
T Consensus 74 vt~GPGs~tgLRvg~~~Ak~La~~~~iPlv~V~hl~aha~sa~ 116 (166)
T 2ivn_A 74 FSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITK 116 (166)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGG
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 7505764312799999999988642655202026999998555
No 3
>>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* (A:1-125,A:287-326)
Probab=100.00 E-value=1.9e-35 Score=264.23 Aligned_cols=118 Identities=29% Similarity=0.425 Sum_probs=108.0
Q ss_pred CCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 88884688750260220778873388884189887311334621218714559999999969999999999838982245
Q gi|254781038|r 2 SKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDM 81 (363)
Q Consensus 2 ~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~i 81 (363)
|.++|+||+||||||+||+|+++ .+++++++.+. +.+.+++|++|+.++|+|.++|.++++++|++++ ++++
T Consensus 2 sm~~M~iLaIdTS~~~~sval~~---~~~~i~~~~~~---~~~~~~~g~~~~~a~~~H~e~L~~~i~~~L~~~~--i~~i 73 (165)
T 3en9_A 2 AMDPMICLGLEGTAEKTGVGIVT---SDGEVLFNKTI---MYKPPKQGINPREAADHHAETFPKLIKEAFEVVD--KNEI 73 (165)
T ss_dssp -CCSCEEEEEECSSSEEEEEEEE---TTSCEEEEEEE---ECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHSC--GGGC
T ss_pred CCCCCEEEEEECCCHHHEEEEEE---CCCCEEEEEEE---EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--CCCC
T ss_conf 98875699998651313679997---99929988668---7657989999189999999999999999997589--5358
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 3687406643012567799999998875148643330367765301
Q gi|254781038|r 82 DSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 82 d~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
|+|+||.|||+|||||||+++||+|++++++|+++|||+++|++++
T Consensus 74 d~Iavs~GPGsfTgLRVG~~~AkgLa~al~iPlv~vs~lea~a~~~ 119 (165)
T 3en9_A 74 DLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIG 119 (165)
T ss_dssp CEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEEEEHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC
T ss_conf 8899967986188799999999999985599836642466420010
No 4
>>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, SGC, transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} (A:108-274)
Probab=100.00 E-value=7.9e-33 Score=246.19 Aligned_cols=161 Identities=13% Similarity=0.085 Sum_probs=141.4
Q ss_pred CCCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCC
Q ss_conf 99843999706874799983756430002233630023888898852887610355666554057333458611106887
Q gi|254781038|r 134 AFPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTL 213 (363)
Q Consensus 134 ~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~ 213 (363)
.|||| |++|||||+++++++...++++|+|+| |++|||+||+| +|||+||+||++|++|+.+.++||.|. .
T Consensus 2 ~fp~l-ll~sGg~t~i~~v~~~~~~~i~gtt~~---G~~~dk~arlL-l~~~~g~~ie~lA~~g~~~~~d~~~~~----i 72 (167)
T 2ews_A 2 LADYI-FANVGTGTSLHYFDGQSQRRVGGIGTG---GGMIQGLGYLL-SQITDYKQLTDMAQHGDRNTIDLKVRH----I 72 (167)
T ss_dssp CSCEE-EEEESSSEEEEEECSSCEEEEEEESCS---HHHHHHHHHHH-HCCCCHHHHHHHHTTCCCTTTCEETTT----C
T ss_pred CCCEE-EEECCCCCCCCCCCCCEEEEECCCCCC---EEEEEHHHHHC-CCCCCCHHHHHHHHCCCCCCCCCCHHH----H
T ss_conf 44325-764164200326568736750554421---15774114653-799843166787635675210121135----5
Q ss_pred CCCCCCHHHHHHHHHHHHH---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHH-HHHHHHH
Q ss_conf 5422102458999999851---12012106889999999999999999999999987621445523654133-4587999
Q gi|254781038|r 214 CDFSFSGLKTSVQKTICAF---DVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGG-VASNHFI 289 (363)
Q Consensus 214 ~dFSFSGLkTav~~~i~~~---~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GG-VaaN~~L 289 (363)
++||||||++.+.....+. ...++.+++|||+|||++++++|.+++.++++.+ +++++|++|| |++|++|
T Consensus 73 ~~~~~~~l~~~~~as~~~~~~~~~~~~~~~~dia~s~q~~v~~~l~~~~~~a~~~~------~i~~iv~~GG~va~N~~l 146 (167)
T 2ews_A 73 YKDTEPPIPGDLTAANFGHVLHHLDADFTPSNKLAAVIGVVGEVVTTMAITVAREF------KTENIVYIGSSFHNNALL 146 (167)
T ss_dssp -------CCTTSEEETTTTGGGCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCEEEEESGGGTTCHHH
T ss_pred HCCCCCCCCCCCCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCCCEEEECCHHHCCHHH
T ss_conf 41677564433421021000133444303005778999999999999999975423------989399989626504999
Q ss_pred HHHHHHHHHHCCCEEEECCH
Q ss_conf 99999999868988996287
Q gi|254781038|r 290 RASLIDLCVLHGFRFVAPPA 309 (363)
Q Consensus 290 R~~l~~~~~~~~~~~~~P~~ 309 (363)
|++|+++++.++++++|||.
T Consensus 147 r~~l~~~~~~~~~~~~fp~~ 166 (167)
T 2ews_A 147 RKVVEDYTVLRGCKPYYVEN 166 (167)
T ss_dssp HHHHHHHHHHTTCEEEECTT
T ss_pred HHHHHHHHHHCCCEEEECCC
T ss_conf 99999999768998996898
No 5
>>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* (A:119-282)
Probab=99.97 E-value=1.2e-30 Score=231.17 Aligned_cols=162 Identities=33% Similarity=0.506 Sum_probs=148.6
Q ss_pred CCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCC
Q ss_conf 98439997068747999837564300022336300238888988528876103556665540573334586111068875
Q gi|254781038|r 135 FPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLC 214 (363)
Q Consensus 135 ~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~ 214 (363)
||||+|++|||||+|..+++ ..++++|.+.|.+.|++||++|++||++++++.+.|..+...+ ..+.+|.+. ..+
T Consensus 3 ~p~L~ll~sgg~~~l~~~~~-~~~k~l~~~~~~s~G~~fD~va~~lg~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~ 77 (164)
T 2ivn_A 3 KDPVGLYVSGGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGE-KYIELPYAV---KGM 77 (164)
T ss_dssp CSCEEEEECSSCEEEEEEET-TEEEEEEEBSSSCHHHHHHHHHHHHTCCSCHHHHHHHHHHTCC-SCCCCCCCE---ETT
T ss_pred CCCCCEEECCCCCEEEEECC-CCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC-CCCCCCCCC---CCC
T ss_conf 78611025167756998616-6337987752523799999876532776778721333553387-534687766---655
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHH
Q ss_conf 42210245899999985112012106889999999999999999999999987621445523654133458799999999
Q gi|254781038|r 215 DFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLI 294 (363)
Q Consensus 215 dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~ 294 (363)
+|||||+++++.+.+++ .++++.|||++||++++++|.+++.++++.+ ++++|+++|||++|++|++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~----~~~~~~diAa~~q~~l~~~l~~~~~~~~~~~------~~~~l~lsGGVa~N~~l~~~l~ 147 (164)
T 2ivn_A 78 DLSFSGLLTEAIRKYRS----GKYRVEDLAYSFQETAFAALVEVTERAVAHT------EKDEVVLVGGVAANNRLREMLR 147 (164)
T ss_dssp EECCHHHHHHHHHHHHH----TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCSEEEEESGGGGCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCCCEEEECHHHHHHHHHHHHH
T ss_conf 41420777666775301----1110665521234428999999999865403------5553254155789999999999
Q ss_pred HHHHHCCCEEEECCHHH
Q ss_conf 99986898899628788
Q gi|254781038|r 295 DLCVLHGFRFVAPPARL 311 (363)
Q Consensus 295 ~~~~~~~~~~~~P~~~~ 311 (363)
+.+..+|+++++||+++
T Consensus 148 ~~l~~~~~~~~~pp~~~ 164 (164)
T 2ivn_A 148 IMTEDRGIKFFVPPYDL 164 (164)
T ss_dssp HHHHHHTCEEECCCHHH
T ss_pred HHHHHCCCEEECCCHHH
T ss_conf 99997699898788687
No 6
>>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* (A:126-286)
Probab=99.97 E-value=5.7e-30 Score=226.45 Aligned_cols=161 Identities=31% Similarity=0.516 Sum_probs=146.6
Q ss_pred CCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCC
Q ss_conf 98439997068747999837564300022336300238888988528876103556665540573334586111068875
Q gi|254781038|r 135 FPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLC 214 (363)
Q Consensus 135 ~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~ 214 (363)
-|||+|++|||||+|+.+++ .+|+++|.|.|.+.|+.||++|++||++++++++.|..+..++. .+.+|.+. ...
T Consensus 1 ~pfl~l~~sgg~t~l~~~~~-~~~k~m~~~~~~s~G~~~D~va~~lgl~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~ 75 (161)
T 3en9_A 1 EDPLTLYVSGGNTQVIAYVS-KKYRVFGETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKK-LVDLPYTV---KGM 75 (161)
T ss_dssp SSCEEEEECSSCEEEEEEET-TEEEEEEEBSSSCHHHHHHHHHHHTTCCSSCHHHHHHHHHTCCC-CCCCCCCE---ETT
T ss_pred CCCEEEEECCCCCEEEEECC-CCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCC---CCC
T ss_conf 57526776378834887446-53179504576465567876442234344662778998760876-55699765---434
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHH
Q ss_conf 42210245899999985112012106889999999999999999999999987621445523654133458799999999
Q gi|254781038|r 215 DFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLI 294 (363)
Q Consensus 215 dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~ 294 (363)
+|||+++++.+.+.++ .++++.|||++||++++++|.+++.++.+.+ ++++|+++|||+.|++|+++|.
T Consensus 76 ~~~~~~~~~~~~~~~~-----~~~~~~diAa~~q~~~~~~l~~~~~~~~~~~------~~~~lvlsGGVa~N~~l~~~l~ 144 (161)
T 3en9_A 76 DIAFSGLLTAAMRAYD-----AGERLEDICYSLQEYAFSMLTEITERALAHT------NKGEVMLVGGVAANNRLREMLK 144 (161)
T ss_dssp EECCHHHHHHHHHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------TCSEEEEESGGGGCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEEEHHHHHHHHHHHH
T ss_conf 6660145547777755-----2898999999999999999999999999971------9398999833998899999999
Q ss_pred HHHHHCCCEEEECCHHH
Q ss_conf 99986898899628788
Q gi|254781038|r 295 DLCVLHGFRFVAPPARL 311 (363)
Q Consensus 295 ~~~~~~~~~~~~P~~~~ 311 (363)
+.++.+++++++||++|
T Consensus 145 ~~l~~~~~~v~~p~~~~ 161 (161)
T 3en9_A 145 AMCEGQNVDFYVPPKEF 161 (161)
T ss_dssp HHHHHTTCEEECCCHHH
T ss_pred HHHHHCCCEEECCCHHH
T ss_conf 99987699998788686
No 7
>>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} (A:148-346)
Probab=99.97 E-value=1.9e-32 Score=243.50 Aligned_cols=185 Identities=14% Similarity=0.060 Sum_probs=159.8
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHH-
Q ss_conf 4864333036776530132256799843999706874799983756430002233630023888898852887610355-
Q gi|254781038|r 111 HKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVE- 189 (363)
Q Consensus 111 ~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~- 189 (363)
-.|+++|||++||++++++..+++|| .+|++|||||+|+++++..+++++|+ .+||++|.|||++|++|.
T Consensus 4 ~~~~~~v~H~~~H~~~~~~~s~~~~~-~il~~~G~gtsi~~~~~~~~~~~iG~--------~~~~~~~~lGl~~~~~~~~ 74 (199)
T 2i7n_A 4 ECYYFENPTNPELCQKKPYCLDNPYP-MLLVNMGSGVSILAVYSKDNYKRVTG--------TSLGGGTFLGLCCLLTGCE 74 (199)
T ss_dssp SEEEEESTTCTTTCEEEEECCSSCCS-EEEEEESSSEEEEEEEETTEEEEEEE--------ESCSHHHHHHHHHHHHCCC
T ss_pred EEEEECCCCCCHHCCCCCCCCCCCCC-EEEEECCCCEEEEEEECCCCEEEECC--------CCCCHHHHHHHHHHHCCCC
T ss_conf 48994267761010024345678886-69998379768999946984688067--------4750689999999970999
Q ss_pred ----HHHHHHHCCCCCCCCCCHHCCCC-CCCCCCCHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----66655405733345861110688-754221024589999998511-201210688999999999999999999999
Q gi|254781038|r 190 ----IEKAALMGDGKRFKFPCPLVQGT-LCDFSFSGLKTSVQKTICAFD-VLEKQDIADICASFQVTVVRILQARLKQGF 263 (363)
Q Consensus 190 ----ie~~A~~g~~~~~~~P~p~~~~~-~~dFSFSGLkTav~~~i~~~~-~~~~~~~~diaasfQ~~i~~~L~~k~~~a~ 263 (363)
++.+|..|+++.|.++.|..... ..+|||+|.+|++.+...+.+ ..+++++.|+|+++|+++++++.++++++.
T Consensus 75 ~~~~~~~lA~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~diA~~~q~~~~~~i~~~~~~~~ 154 (199)
T 2i7n_A 75 TFEEALEMAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTITNNIGSIARMCA 154 (199)
T ss_dssp SHHHHHHHHHHCCGGGTSEEHHHHHSSCBGGGTBCTTSEEETTTTTTSHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999846997322541364558876656889899998605411234444489889999999999999999999999
Q ss_pred HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH----CCCEEEECCHH
Q ss_conf 998762144552365413345879999999999986----89889962878
Q gi|254781038|r 264 LLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVL----HGFRFVAPPAR 310 (363)
Q Consensus 264 ~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~----~~~~~~~P~~~ 310 (363)
+.+ ++++|+++|||++|..||.++.+.+.+ .+++++|||++
T Consensus 155 ~~~------~~~~lv~sGGVa~N~~l~~~i~~~~~~~~~~~~~~~~~p~~~ 199 (199)
T 2i7n_A 155 LNE------NIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHE 199 (199)
T ss_dssp HHH------TCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTT
T ss_pred HHC------CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCH
T ss_conf 983------999899989611374889999999999843588269973656
No 8
>>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} (A:127-287)
Probab=99.96 E-value=2.5e-27 Score=208.21 Aligned_cols=160 Identities=31% Similarity=0.495 Sum_probs=144.0
Q ss_pred CCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC
Q ss_conf 84399970687479998375643000223363002388889885288761035566655405733345861110688754
Q gi|254781038|r 136 PYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCD 215 (363)
Q Consensus 136 PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~d 215 (363)
|||+|++|||||+|+.+++ ..++++|.|.|.+.|+.||++|+.||++++++.++|..+..++. .+.++.|. ...+
T Consensus 2 ~fl~l~~sg~~~~l~~~~~-~~~k~m~~~~~~s~G~~~d~~a~~lg~~~~~~~e~~~~~~~~~~-a~~~~~~~---~~~~ 76 (161)
T 3eno_A 2 DPVMLYVSGGNTQVIAHVN-GRYRVLGETLDIGIGNMIDKFAREAGIPFPGGPEIEKLAMKGTK-LLDLPYSV---KGMD 76 (161)
T ss_dssp SCEEEEESSSCEEEEEECS-SBEEEEEEBSSCCHHHHHHHHHTTTTCCSCHHHHHHTTGGGCCS-CCCCCCCE---ETTE
T ss_pred CCEEEEECCCCCEEEEECC-CEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC-CCCCCCCC---CCCC
T ss_conf 2104676068843798617-55888556667543226666676528976301677778862984-56797433---5453
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
Q ss_conf 22102458999999851120121068899999999999999999999999876214455236541334587999999999
Q gi|254781038|r 216 FSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLID 295 (363)
Q Consensus 216 FSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~ 295 (363)
|+|+++++.+.+.++. .++++||||+||++++++|.+++.++...+ +++.|+++|||+.|++|+++|.+
T Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~~diAa~~q~~l~~~l~~~~~~~~~~~------~~~~l~l~GGVa~N~~l~~~l~~ 145 (161)
T 3eno_A 77 TAFSGILTAALQYLKT-----GQAIEDISYSIQETAFAMLVEVLERALYVS------GKDEILMAGGVALNRRLRDMVTN 145 (161)
T ss_dssp ECCHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------TCSEEEEESSGGGCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCEEECCCHHHHHHHHHHHHH
T ss_conf 1111266788876554-----542325657777889999999999999870------77621213627778999999999
Q ss_pred HHHHCCCEEEECCHHH
Q ss_conf 9986898899628788
Q gi|254781038|r 296 LCVLHGFRFVAPPARL 311 (363)
Q Consensus 296 ~~~~~~~~~~~P~~~~ 311 (363)
.++..++++++||++|
T Consensus 146 ~l~~~~~~~~~p~~~~ 161 (161)
T 3eno_A 146 MAREAGIRSYLTDREY 161 (161)
T ss_dssp HHHHHTSEEECCCTTT
T ss_pred HHHHCCCEEECCCHHH
T ss_conf 9998699899998687
No 9
>>2gel_A Putative GRAM negative resuscitation promoting factor; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium LT2} PDB: 2gem_A 1okj_A (A:1-93,A:190-231)
Probab=99.85 E-value=6e-21 Score=164.21 Aligned_cols=102 Identities=22% Similarity=0.409 Sum_probs=91.9
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
|.||+|||||+++++|+++ +++++++..... +.|.+.|+++++++|++++++++|+|+|+
T Consensus 1 M~iLaIDTS~~~~~vAl~~----d~~il~~~~~~~----------------~~hse~L~~~I~~lL~~a~i~~~dId~Ia 60 (135)
T 2gel_A 1 MRILAIDTATEACSVALWN----NGTINAHFELCP----------------REHTQRILPMVQEILAASGASLNEIDALA 60 (135)
T ss_dssp CEEEEEECSSSEEEEEEEE----TTEEEEEEEECC----------------SCCHHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred CCEEEEECCCCCEEEEEEE----CCEEEEEEEECC----------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHE
T ss_conf 9899999277271999999----999999999654----------------89999999999999855002212304430
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 406643012567799999998875148643330367765301
Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
|+.|||+|||||||+++||+|++.+++|+++|||-|.-+-.+
T Consensus 61 vs~GPGSFTGlRVgla~AkgLa~~~~iPligvs~~~~~~~~~ 102 (135)
T 2gel_A 61 FGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSAAEDMLPIA 102 (135)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 003566423377889999999986389876405999999999
No 10
>>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} (A:96-238)
Probab=99.79 E-value=3.6e-19 Score=151.94 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=114.0
Q ss_pred EEEEEECCCEEEEEECCC-CCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCC
Q ss_conf 399970687479998375-6430002233630023888898852887610355666554057333458611106887542
Q gi|254781038|r 138 LVLLVSGGHTQILLVRDV-AHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCDF 216 (363)
Q Consensus 138 L~LlvSGGhT~l~~~~~~-~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~dF 216 (363)
.+|++||||+.++.+++- ....+++++.|.+.|++||++|+++|+++| .+++++... ..|.|+ ..+..+|
T Consensus 4 ~~l~igG~~~~~i~~~~g~~~~~~ln~~~~~~~G~~~D~~a~~lg~~~~---~~~~~~~~~-----~~~~~~-~~~~~~f 74 (143)
T 1hux_A 4 TVIDIGGQDVKVIHVENGTMTNFQMNDKCAAGTGRFLDVMANILEVKVS---DLAELGAKS-----TKRVAI-SSTCTVF 74 (143)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEESSCCTTSHHHHHHHHHHHTCCTT---THHHHHTTC-----CSCCCC-CCCSHHH
T ss_pred EEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHEEHH---HHHHHCCCC-----CCCEEE-CCCEEEE
T ss_conf 8997268400389960684021343250115766089998755302477---788734785-----553555-0312555
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 21024589999998511201210688999999999999999999999998762144552365413345879999999999
Q gi|254781038|r 217 SFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDL 296 (363)
Q Consensus 217 SFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~ 296 (363)
++++++..+. .+.++.|||++||+++++++.++++++ .+++++|++|||+.|++|+++|+++
T Consensus 75 ~~~~~~~~~~---------~~~~~~dia~~~~~~~a~~i~~~~~~~---------~~~~~vvl~GGv~~N~~L~~~l~~~ 136 (143)
T 1hux_A 75 AESEVISQLS---------KGTDKIDIIAGIHRSVASRVIGLANRV---------GIVKDVVMTGGVAQNYGVRGALEEG 136 (143)
T ss_dssp HHHHHHHHHH---------TTCCHHHHHHHHHHHHHHHHHHHHHTT---------CCCSSEEEESGGGGCHHHHHHHHHH
T ss_pred ECHHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHHHC---------CCCCEEEEECCCHHHHHHHHHHHHC
T ss_conf 2078898875---------699689999999999999999987641---------7765279856600015578888734
Q ss_pred HHHCCC
Q ss_conf 986898
Q gi|254781038|r 297 CVLHGF 302 (363)
Q Consensus 297 ~~~~~~ 302 (363)
++.+++
T Consensus 137 l~~~v~ 142 (143)
T 1hux_A 137 LGVEIK 142 (143)
T ss_dssp HCSCEE
T ss_pred CCCEEE
T ss_conf 670674
No 11
>>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Thermotoga maritima MSB8} (A:1-104,A:174-218)
Probab=99.79 E-value=6.1e-19 Score=150.36 Aligned_cols=97 Identities=21% Similarity=0.417 Sum_probs=83.2
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
.+.||+||||. +||+|++++ ++++.... .+.+.|.+.|.++++++|++++++++|||+|
T Consensus 12 ~~~ILaIDTS~-~~sVAi~~~----~~il~~~~----------------~~~r~hse~L~p~Ie~lL~~a~l~~~dId~I 70 (149)
T 2a6a_A 12 HXNVLALDTSQ-RIRIGLRKG----EDLFEISY----------------TGEKKHAEILPVVVKKLLDELDLKVKDLDVV 70 (149)
T ss_dssp -CEEEEEECSS-SEEEEEEET----TEEEEEEE----------------ESCGGGGGHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred CCEEEEEECCC-CCEEEEEEC----CEEEEEEE----------------CCCHHHHHHHHHHHHHHHHHCCCCHHHHHEE
T ss_conf 36032076164-377999989----99999970----------------2767999999999999999849997980003
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 74066430125677999999988751486433303677
Q gi|254781038|r 85 AVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEG 122 (363)
Q Consensus 85 avt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~a 122 (363)
+|+.|||+|||||||+++||+||+++++|++|||---+
T Consensus 71 avs~GPGSFTGLRIGls~AKgLa~~~~iPligVs~~~~ 108 (149)
T 2a6a_A 71 GVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNISPA 108 (149)
T ss_dssp EEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECCCHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 66158875210678999998898636886014674999
No 12
>>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} (A:242-495)
Probab=97.36 E-value=0.0096 Score=38.60 Aligned_cols=140 Identities=16% Similarity=0.111 Sum_probs=89.7
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC--CCCCCCCHH-----CCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 336300238888988528876103556665540573--334586111-----0688754221024589999998511201
Q gi|254781038|r 164 TIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDG--KRFKFPCPL-----VQGTLCDFSFSGLKTSVQKTICAFDVLE 236 (363)
Q Consensus 164 T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~--~~~~~P~p~-----~~~~~~dFSFSGLkTav~~~i~~~~~~~ 236 (363)
+---..|.+++-+.+.++..+.. ..+.++..... .-+-+|... .......-+|.|++..
T Consensus 60 ~~~~~~g~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~p~~~G~~~p~~~~~~~g~~~gl~~~------------ 125 (254)
T 2dpn_A 60 GSLFVAGAAVGWLKEVGLIRESA--EVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRG------------ 125 (254)
T ss_dssp EEESCSHHHHHHHHHTTSSSSTT--THHHHHHTCSCCSSCEEECCTTCBCTTTCBTTCCEEEEEECTT------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCHH--HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCC------------
T ss_conf 89999999999999845755489--9999872467889769948877777867786678157557999------------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC-HHHCCCH
Q ss_conf 210688999999999999999999999998762144552365413345879999999999986898899628-7887725
Q gi|254781038|r 237 KQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP-ARLCTDN 315 (363)
Q Consensus 237 ~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~-~~~ctDN 315 (363)
.++.++++++.+.++-.+...+ +..++......+.+.++||.+.|..+++.+.++. |.+++.++ ++-+.=-
T Consensus 126 -~~~~~l~ra~~Egiaf~~r~~~----~~l~~~~g~~~~~i~~~GG~s~s~~w~Qi~Advl---g~pV~~~~~~e~~a~G 197 (254)
T 2dpn_A 126 -TSRAHLARAALEGVAFQVRDVV----LAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL---GVPVAVPEVTETTALG 197 (254)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHH----HHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESCSCHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHH---CCCEEECCCCCHHHHH
T ss_conf -9999999999999999999876----5443303898667999781121799999999997---9925966887479999
Q ss_pred HHHHHHHHHH
Q ss_conf 8999999999
Q gi|254781038|r 316 AVMIAWAALE 325 (363)
Q Consensus 316 AaMIA~ag~~ 325 (363)
|||+|+.+..
T Consensus 198 aA~~A~~a~g 207 (254)
T 2dpn_A 198 AALMAGVGAG 207 (254)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHCC
T ss_conf 9999999759
No 13
>>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, glycerol metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis KOD1} (O:239-497)
Probab=97.12 E-value=0.02 Score=36.31 Aligned_cols=142 Identities=13% Similarity=0.097 Sum_probs=86.4
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 223363002388889885288761035566655405733345861110688-------7542210245899999985112
Q gi|254781038|r 162 GTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDV 234 (363)
Q Consensus 162 g~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~ 234 (363)
-..-.-..|-++|.+.+.++...- -...|.++.......-.+..|...+. ...=+|.|+..
T Consensus 57 ~~~~~~~~g~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~p~l~G~r~p~~d~~~~g~~~Gl~~----------- 124 (259)
T 2zf5_O 57 LEGSIFVTGAAVQWLRDGIKIIKH-ASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITR----------- 124 (259)
T ss_dssp EEEEESCSHHHHHHHHHTSCCCSC-GGGHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECT-----------
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCC-----------
T ss_conf 788999999999999986055520-56789998347899974981887776787778656725757899-----------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHH-HCC
Q ss_conf 0121068899999999999999999999999876214455236541334587999999999998689889962878-877
Q gi|254781038|r 235 LEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPAR-LCT 313 (363)
Q Consensus 235 ~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~-~ct 313 (363)
..++.++..++.+.++-.+. ..++..++ ......++++||-+.|..+++.+.++. |.+++.++.. -+.
T Consensus 125 --~~~~~~l~rAvlEgiaf~~~----~~~~~l~~--~~~~~~i~~~GGgs~s~~~~Qi~Adv~---g~pv~~~~~~e~~a 193 (259)
T 2zf5_O 125 --GTGREHLARATLEAIAYLTR----DVVDEMEK--LVQIKELRVDGGATANDFLMQFQADIL---NRKVIRPVVKETTA 193 (259)
T ss_dssp --TCCHHHHHHHHHHHHHHHHH----HHHHHHTT--TSCCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESCSCHHH
T ss_pred --CCCHHHHHHHHHHHCCHHHH----HHHHHHHH--CCCCCEEEEECCCHHCHHHHHHHHHHH---CCEEEECCCCCHHH
T ss_conf --99999999998761132499----99999971--689866999657034689999999997---99069678886589
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 2589999999999
Q gi|254781038|r 314 DNAVMIAWAALER 326 (363)
Q Consensus 314 DNAaMIA~ag~~~ 326 (363)
=-|||+|..|.-.
T Consensus 194 ~GaA~~A~~a~g~ 206 (259)
T 2zf5_O 194 LGAAYLAGLAVDY 206 (259)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999997497
No 14
>>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} (A:)
Probab=96.95 E-value=0.036 Score=34.59 Aligned_cols=296 Identities=14% Similarity=0.065 Sum_probs=154.6
Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 88468875026022077887338888418988731133462121871455999999996999999999983898224536
Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363)
Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363)
+++++||||-..--+-++++ |.++++++...........+-|.+ |.-...-.+.+..++++++++.++...+|.+
T Consensus 1 ~~~~~lgiDiGTssvKa~l~---d~~g~~v~~~~~~~~~~~~~~g~~--e~d~~~~~~~~~~~~~~l~~~~~~~~~~i~~ 75 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVM---DHDANIISVSQREFEQIYPKPGWV--EHDPMEIWATQSSTLVEVLAKADISSDQIAA 75 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEE---CTTCCEEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCEEEEEEEECCCCCHHHEE---CCCCCEEEEEEECCCEECCCCCCE--EECHHHHHHHHHHHHHHHHHHCCCCHHHEEE
T ss_conf 97399999820213001167---198989999996378042899908--9999999999999999999975998777689
Q ss_pred EEECCC-CCH-----------HHH-----HHHHHHH--------HHHHHHHHCCCCCCCH------HHHHH---------
Q ss_conf 874066-430-----------125-----6779999--------9998875148643330------36776---------
Q gi|254781038|r 84 IAVTAG-PGL-----------MGG-----LIVGLMT--------AKAISYVSHKPFYAIN------HLEGH--------- 123 (363)
Q Consensus 84 Iavt~g-PG~-----------~~~-----L~vG~~~--------Ak~la~~~~~Pli~Vn------H~~aH--------- 123 (363)
|++|.. .|. .+. -|..-.. .+.+....+.|..+-+ ++.-|
T Consensus 76 I~~s~~~~~~~~~d~~~~~~~~~~i~w~D~r~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~kl~wl~~~~p~~~~~~~ 155 (510)
T 2p3r_A 76 IGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERAR 155 (510)
T ss_dssp EEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHHHHH
T ss_pred EEEECCCCCEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHH
T ss_conf 99978978689998999928744311466420999999986034999999868987840279999999984311799998
Q ss_pred -H----------HCCCCC------------------------------------------------------C-------
Q ss_conf -5----------301322------------------------------------------------------5-------
Q gi|254781038|r 124 -I----------LTARLT------------------------------------------------------D------- 131 (363)
Q Consensus 124 -~----------~~~~l~------------------------------------------------------~------- 131 (363)
+ +++.+. .
T Consensus 156 ~~l~~~d~l~~~LtG~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~l~~~~~~~~~~lp~~~~~G~v~~~~~~~~gl~~g 235 (510)
T 2p3r_A 156 RGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTR 235 (510)
T ss_dssp TTCEEEECHHHHHHHHHTTTSCCEEEHHHHHTTSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTTSCC
T ss_pred HHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 75330222355643222479716777655344646574445558899987273376567766664512530043214656
Q ss_pred -----------------CCCCCCEEEEEECCCEEEEEECCCC---CCE--ECC--------------CCCCCCHHHHHHH
Q ss_conf -----------------6799843999706874799983756---430--002--------------2336300238888
Q gi|254781038|r 132 -----------------DIAFPYLVLLVSGGHTQILLVRDVA---HYD--RLG--------------TTIDDALGECFDK 175 (363)
Q Consensus 132 -----------------~~~~PfL~LlvSGGhT~l~~~~~~~---~~~--ilg--------------~T~Dda~Ge~~DK 175 (363)
...-| -...+|.|+|..+.+.... +.+ ... .-.--..|-+++.
T Consensus 236 ~~V~~g~~D~~~a~ig~g~~~~-~~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w 314 (510)
T 2p3r_A 236 IPISGIAGDQQAALFGQLCVKE-GMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQW 314 (510)
T ss_dssp EEEEEEEEHHHHHHHHTTCCST-TCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHH
T ss_pred CCEEEEECCCCCCCEEECCCCC-CEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 6678743255545411001246-414672364547785028865566345400120146750366999899999999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHCCCCCC-CCCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 988528876103556665540573334-5861110688-------75422102458999999851120121068899999
Q gi|254781038|r 176 IAKSLGLPYPGGVEIEKAALMGDGKRF-KFPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDVLEKQDIADICASF 247 (363)
Q Consensus 176 ~ar~Lgl~yPgGp~ie~~A~~g~~~~~-~~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasf 247 (363)
+.+.++.+.. ..++.++....+... .+-.|...+. +..=+|.|+.. ..+..++..++
T Consensus 315 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~l~ger~p~~~~~~~g~~~gl~~-------------~~~~~~l~ra~ 379 (510)
T 2p3r_A 315 LRDEMKLIND--AYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTR-------------GVNANHIIRAT 379 (510)
T ss_dssp HHHTSCCCCS--SSCHHHHHTTSSSCTTCEEECCTTCCBTTTCCTTCCEEEEEECT-------------TCCHHHHHHHH
T ss_pred HHHHHCCCCH--HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCC-------------CCCHHHHHHHH
T ss_conf 9997323302--45656665136887744763147767888889777747732523-------------24679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCH-HHCCCHHHHHHHHHHHH
Q ss_conf 99999999999999999987621445523654133458799999999999868988996287-88772589999999999
Q gi|254781038|r 248 QVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPA-RLCTDNAVMIAWAALER 326 (363)
Q Consensus 248 Q~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~-~~ctDNAaMIA~ag~~~ 326 (363)
.+.+.-.+..-+ +..+......++.++++||.+.|..+++.+.+++ |.++..++. +-+.=-|||+|+.+...
T Consensus 380 ~Egia~~~~~~~----~~~~~~~~~~~~~i~~~GG~s~n~~~~qi~Advl---g~pv~~~~~~e~~a~GaA~~a~~~~g~ 452 (510)
T 2p3r_A 380 LESIAYQTRDVL----EAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL---GTRVERPEVREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp HHHHHHHHHHHH----HHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESCCCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHH----HHHHHHCCCCCCEEEEECCHHHCHHHHHHHHHHH---CCEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 998888899999----9999853999777999673445899999999987---984696798865899999999997398
Q ss_pred H
Q ss_conf 9
Q gi|254781038|r 327 M 327 (363)
Q Consensus 327 ~ 327 (363)
+
T Consensus 453 ~ 453 (510)
T 2p3r_A 453 W 453 (510)
T ss_dssp S
T ss_pred C
T ss_conf 8
No 15
>>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, structural genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* (A:247-501)
Probab=96.87 E-value=0.042 Score=34.13 Aligned_cols=142 Identities=15% Similarity=0.062 Sum_probs=87.4
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC--CCCCCCCHH-----CCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 2336300238888988528876103556665540573--334586111-----068875422102458999999851120
Q gi|254781038|r 163 TTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDG--KRFKFPCPL-----VQGTLCDFSFSGLKTSVQKTICAFDVL 235 (363)
Q Consensus 163 ~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~--~~~~~P~p~-----~~~~~~dFSFSGLkTav~~~i~~~~~~ 235 (363)
..---..|.++|.+.+.++.... -...+.++..... .-+-+|... ....+..-+|.|+..
T Consensus 59 ~~~~~~~G~~l~w~~~~~~~~~~-~~~~~~~~~~~~~~~gl~~~P~l~Ger~p~~~~~~~g~~~Gl~~------------ 125 (255)
T 3g25_A 59 EGSIFVSGSAIQWLRDGLRXINS-APQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTR------------ 125 (255)
T ss_dssp EEEESCSTHHHHHHHHTSCCCSS-GGGHHHHHTTSSCCTTCEEECCTTCBCTTTCBTTCCEEEEEECT------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC------------
T ss_conf 88999768899989876444555-67899998447887873654632446787778233643058899------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC-CHHHCCC
Q ss_conf 121068899999999999999999999999876214455236541334587999999999998689889962-8788772
Q gi|254781038|r 236 EKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAP-PARLCTD 314 (363)
Q Consensus 236 ~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P-~~~~ctD 314 (363)
..++.++..++.+.++=.+..-+ +..++......+.++++||-+.|..+.+.+.++. |.+++.+ ..+-+.=
T Consensus 126 -~~~~~~l~ravlEgiaf~~~~~~----~~l~~~~~~~~~~i~~~GG~s~s~~~~Qi~Advl---g~pv~~~~~~e~~a~ 197 (255)
T 3g25_A 126 -GTEKEHFIRATLESLCYQTRDVX----EAXSKDSGIDVQSLRVDGGAVKNNFIXQFQADIV---NTSVERPEIQETTAL 197 (255)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHHHH----HHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESCCCHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHH---CCEEEECCCCCHHHH
T ss_conf -98999999999999999999999----9999862999887999897123899999999997---986895798847899
Q ss_pred HHHHHHHHHHH
Q ss_conf 58999999999
Q gi|254781038|r 315 NAVMIAWAALE 325 (363)
Q Consensus 315 NAaMIA~ag~~ 325 (363)
-|||+|+.+.-
T Consensus 198 GaA~~A~~~~g 208 (255)
T 3g25_A 198 GAAFLAGLAVG 208 (255)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHCC
T ss_conf 99999999749
No 16
>>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} (A:1-95,A:239-270)
Probab=96.71 E-value=0.0092 Score=38.71 Aligned_cols=105 Identities=20% Similarity=0.216 Sum_probs=75.0
Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 88468875026022077887338888418988731133462121871455999999996999999999983898224536
Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363)
Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363)
|++++||||--.-.+-++|+ |.++++++........ +.+.+...++++|+++++...+|.+
T Consensus 1 M~~y~LGIDiGtTsvKavl~---D~dG~iia~~~~~t~~----------------~~~~i~~~i~~~L~~~~~~~~~I~g 61 (127)
T 1hux_A 1 MSIYTLGIDVGSTASKCIIL---KDGKEIVAKSLVAVGT----------------GTSGPARSISEVLENAHMKKEDMAF 61 (127)
T ss_dssp -CCEEEEEEECSSEEEEEEE---ETTTEEEEEEEEECCS----------------SCCHHHHHHHHHHHHHTCCGGGCSE
T ss_pred CCEEEEEECCCCCCEEEEEE---CCCCEEEEEEEECCCC----------------CCCHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 95389853147741137998---3530232256622699----------------8633899999999862588635557
Q ss_pred EEECC-CCCHHHH-----HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 87406-6430125-----67799999998875148643330367765301
Q gi|254781038|r 84 IAVTA-GPGLMGG-----LIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 84 Iavt~-gPG~~~~-----L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
|++|. |+++... --.-..-.++..+...-|+--.|--.|-.+-+
T Consensus 62 Igvtg~g~~~v~~d~~g~~~~~w~d~Rga~~~~~~~~~~~~~~~~~~~~~ 111 (127)
T 1hux_A 62 TLATGYGRNSLEGIADKQMSELSCHAMGASFIWPSPLAQYNGALGAALYA 111 (127)
T ss_dssp EEEESTTTTTTTTTCSEEECHHHHHHHHHHHHCTCGGGGGHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHHEEECCCCCCEEECCCCHHHHHHHHHHHHHH
T ss_conf 85135365566666443222022110443045578127651167789998
No 17
>>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleotide-binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O (X:245-506)
Probab=96.67 E-value=0.059 Score=33.14 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=86.6
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC--CCCCCHHCCC-------CCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 233630023888898852887610355666554057333--4586111068-------8754221024589999998511
Q gi|254781038|r 163 TTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKR--FKFPCPLVQG-------TLCDFSFSGLKTSVQKTICAFD 233 (363)
Q Consensus 163 ~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~--~~~P~p~~~~-------~~~dFSFSGLkTav~~~i~~~~ 233 (363)
....-..|-++|.+.+.++.+.. -...|.+++...... +-+| ...+ ....-+|.|+...
T Consensus 60 ~~~~~~~g~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~p--~l~G~~~p~~~~~~~g~~~g~~~~--------- 127 (262)
T 3h3n_X 60 EGSIFVAGSAIQWLRDGLRMIET-SPQSEELAAKAKGDNEVYVVP--AFTGLGAPYWDSEARGAVFGLTRG--------- 127 (262)
T ss_dssp EEEECCSSHHHHHHHHTSCCCSS-TTHHHHHHTTCCSCSCCEEEC--CTTCBCTTTCBTTCCCEEECCCTT---------
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHCCCCCCEEEECC--CCCCCCCCCCCCCCCEEEECCCCC---------
T ss_conf 22789999999999986133421-567655440378888189837--987666888897876689778888---------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCH-HHC
Q ss_conf 2012106889999999999999999999999987621445523654133458799999999999868988996287-887
Q gi|254781038|r 234 VLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPA-RLC 312 (363)
Q Consensus 234 ~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~-~~c 312 (363)
.++.++..++.+.++-.+...+ +..++......+.+.++||-+-|..+++.+.++. |.+++.+.. +-+
T Consensus 128 ----~~~~~l~rAvlEgia~~~~~~l----~~l~~~~~~~~~~i~~~GG~s~s~~w~Qi~Adv~---g~pv~~~~~~e~~ 196 (262)
T 3h3n_X 128 ----TTKEDFVRATLQAVAYQSKDVI----DTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADIL---DIDVQRAANLETT 196 (262)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHH----HHHHHHHCSCCCEEEEESGGGGCHHHHHHHHHHH---TSEEEECSSSCHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHH---CCEEEECCCCCHH
T ss_conf ----7658999999999998754578----8888861999777999878424799999999997---9905956988578
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 7258999999999
Q gi|254781038|r 313 TDNAVMIAWAALE 325 (363)
Q Consensus 313 tDNAaMIA~ag~~ 325 (363)
.=-|||+|+.+.-
T Consensus 197 a~GaA~~A~~~~g 209 (262)
T 3h3n_X 197 ALGAAYLAGLAVG 209 (262)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCC
T ss_conf 9999999999749
No 18
>>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleotide-binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O (X:1-84,X:222-244)
Probab=96.59 E-value=0.021 Score=36.21 Aligned_cols=80 Identities=14% Similarity=0.238 Sum_probs=59.1
Q ss_pred CCCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98888468875026022077887338888418988731133462121871--4559999999969999999999838982
Q gi|254781038|r 1 MSKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGV--VPEVAARAHVDVLDILIKQTLLRANMQI 78 (363)
Q Consensus 1 m~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv--~P~~A~~~H~~~l~~li~~~l~~a~~~~ 78 (363)
|+. .+++||||-..-.+=++|+ |.++++++............-|.+ -|+ +-.+.+..++++++++++++.
T Consensus 1 Mm~-~~~iLgIDiGTTs~Ka~lv---d~~G~iva~~~~~~~~~~~~~g~~eqdpe----~iw~~i~~~i~~ll~~a~i~~ 72 (107)
T 3h3n_X 1 MAE-KNYVMAIDQGTTSSRAIIF---DRNGKKIGSSQKEFPQYFPKSGWVEHNAN----EIWNSVQSVIAGAFIESGIRP 72 (107)
T ss_dssp -CC-CCEEEEEEECSSEEEEEEE---ETTSCEEEEEEEECCCBCSSTTCCEECHH----HHHHHHHHHHHHHHHHHTCCG
T ss_pred CCC-CCEEEEEECCCCCHHHHEE---CCCCCEEEEEEEECCCCCCCCCCEEECHH----HHHHHHHHHHHHHHHHCCCCH
T ss_conf 997-8489999821112023157---18999999999836716589982898999----999999999999999849987
Q ss_pred CCCCEEEECC
Q ss_conf 2453687406
Q gi|254781038|r 79 SDMDSIAVTA 88 (363)
Q Consensus 79 ~~id~Iavt~ 88 (363)
.+|.+|+++.
T Consensus 73 ~~I~~Igis~ 82 (107)
T 3h3n_X 73 EAIAGIGITN 82 (107)
T ss_dssp GGEEEEEEEE
T ss_pred HHEEEEEEEC
T ss_conf 8868999978
No 19
>>3gbt_A Gluconate kinase; LBA0354, FGGY kinase family, carbohydrate metabolic process, transferase, structural genomics, PSI-2; 2.40A {Lactobacillus acidophilus ncfm} (A:238-504)
Probab=96.53 E-value=0.072 Score=32.53 Aligned_cols=167 Identities=16% Similarity=0.083 Sum_probs=96.8
Q ss_pred EEEEECCCEEEEEECCCC-----CC----------EECCCCCCCCHHHHHHHHHHHCCCCCCH-HHHHHHHHHHCCCCCC
Q ss_conf 999706874799983756-----43----------0002233630023888898852887610-3556665540573334
Q gi|254781038|r 139 VLLVSGGHTQILLVRDVA-----HY----------DRLGTTIDDALGECFDKIAKSLGLPYPG-GVEIEKAALMGDGKRF 202 (363)
Q Consensus 139 ~LlvSGGhT~l~~~~~~~-----~~----------~ilg~T~Dda~Ge~~DK~ar~Lgl~yPg-Gp~ie~~A~~g~~~~~ 202 (363)
.+.+|-|++..+.+.... .. ..+-...--..|-+++-..+.++.+-.. ...++.++.......-
T Consensus 17 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~g 96 (267)
T 3gbt_A 17 HCALNVGTSGAIRTIVDQPKIDPSASYFCYPADKTHYLLGGPVNNGGIVFNWARQTLFDADETPQDFLDVAQTAPAGSRN 96 (267)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCCSEEEEEETTEEEEEEEESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSCTTGGG
T ss_pred CEEEEEECCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 12588621441785025676776543000112345432221100113489999985102013078887777428889996
Q ss_pred CCCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 5861110688-------754221024589999998511201210688999999999999999999999998762144552
Q gi|254781038|r 203 KFPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQA 275 (363)
Q Consensus 203 ~~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~ 275 (363)
.+..|...+. ...-+|.|+.. ..++.++..+..+.+.-.+.. .++..++ ....++
T Consensus 97 l~~~p~l~G~r~p~~~~~~~g~~~Gl~~-------------~~~~~~l~ravlEgiaf~~~~----~~~~l~~-~~~~~~ 158 (267)
T 3gbt_A 97 LIFLPYLGGERAPIWDANARGSFVGLTR-------------XHQKPEXARAVIEGIIFNLYD----AASNLIK-NTKKPV 158 (267)
T ss_dssp CEEEECTTCBCTTTCBTTCCEEEESCCT-------------TCCHHHHHHHHHHHHHHHHHH----HHHHHHT-TSCCCS
T ss_pred EEEECCCCCCCCCCCCCCCCEEEEECCC-------------CCCHHHHHHHHHHHHHHHHHH----HHHHHHH-CCCCCC
T ss_conf 6984898888887536566405740333-------------331256666654225455338----9999986-348986
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC-CHHHCCCHHHHHHHHHHHH
Q ss_conf 36541334587999999999998689889962-8788772589999999999
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFRFVAP-PARLCTDNAVMIAWAALER 326 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P-~~~~ctDNAaMIA~ag~~~ 326 (363)
.++++||-+-|..+++.+.++. |.+++.+ .++-+.=-|||+|+.+...
T Consensus 159 ~i~~~GGgs~s~~w~Qi~Advl---g~pv~~~~~~e~~a~GaA~~A~~a~g~ 207 (267)
T 3gbt_A 159 AINATGGFLKSDFVRQLCANIF---NVPIVTXKEQQSGTLAAXFLARQALGL 207 (267)
T ss_dssp EEEEESGGGCSHHHHHHHHHHH---TSCEEEESCSCHHHHHHHHHHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHHHHH---CCCEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 8999783435599999999988---993796788756999999999997698
No 20
>>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinase-HSP70- actin superfamily, L-rhamnulose kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* (A:236-489)
Probab=96.46 E-value=0.08 Score=32.24 Aligned_cols=82 Identities=18% Similarity=0.259 Sum_probs=63.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCH
Q ss_conf 12106889999999999999999999999987621445523654133458799999999999868988996287887725
Q gi|254781038|r 236 EKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDN 315 (363)
Q Consensus 236 ~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDN 315 (363)
.+..+.++..++.+.+.-.+...++. .+.......+.++++||.+.|..+++.+.++. |.++..++.+-+.=-
T Consensus 125 ~~~~~~~l~ravlEgi~~~~~~~~~~----~~~~~~~~~~~i~~~GG~s~s~~w~Qi~Adv~---g~pv~v~~~e~~alG 197 (254)
T 2uyt_A 125 IPESDAELARCIFDSLALLYADVLHE----LAQLRGEDFSQLHIVGGGCQNTLLNQLCADAC---GIRVIAGPVEASTLG 197 (254)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHH----HHHHHTCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEECCTTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCEEEEEECHHHCHHHHHHHHHHH---CCCEEECCCCHHHHH
T ss_conf 99988999999999999999999999----98633989887999907565889999999987---991685786478999
Q ss_pred HHHHHHHHH
Q ss_conf 899999999
Q gi|254781038|r 316 AVMIAWAAL 324 (363)
Q Consensus 316 AaMIA~ag~ 324 (363)
|||+|+.+.
T Consensus 198 AA~~A~~~~ 206 (254)
T 2uyt_A 198 NIGIQLMTL 206 (254)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
T ss_conf 999999980
No 21
>>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis mr-1} (A:146-325)
Probab=96.41 E-value=0.029 Score=35.23 Aligned_cols=158 Identities=18% Similarity=0.219 Sum_probs=94.3
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHH-HHHHHHHC-CCCCCHHHHH
Q ss_conf 643330367765301322567998439997068747999837564300022336300238-88898852-8876103556
Q gi|254781038|r 113 PFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGEC-FDKIAKSL-GLPYPGGVEI 190 (363)
Q Consensus 113 Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~-~DK~ar~L-gl~yPgGp~i 190 (363)
||+|+-|.. +.....-+ -+++==||=+.|-+.....+ .++ --|.-+|++ +|-..+.+ |.+|=-+-.+
T Consensus 2 PLvP~~~~~-------lf~~~~~~-r~~lNIGGIaNiT~lp~~~~-~v~--afDtGPGN~liD~~~~~~~~~~yD~dG~~ 70 (180)
T 3cqy_A 2 PLVPAFHQQ-------TFAQVGKK-RVILNIGGIANITYLPGNSE-EVL--GFDTGPGNTLIDAWVQQVKNESYDKNGAW 70 (180)
T ss_dssp CCHHHHHHH-------HHCCTTCC-EEEEEESSEEEEEEECSSSS-CCE--EEEEEESSHHHHHHHHHHHCCSSCGGGHH
T ss_pred CCHHHHHHH-------HHHHCCCC-EEEEEECCCCEEEECCCCCC-CCE--EECCCCHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 823776899-------97422343-58851024332444135886-434--66247167799999999838740003521
Q ss_pred --------HHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --------665540573334586111068875422102458999999851120121068899999999999999999999
Q gi|254781038|r 191 --------EKAALMGDGKRFKFPCPLVQGTLCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQG 262 (363)
Q Consensus 191 --------e~~A~~g~~~~~~~P~p~~~~~~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a 262 (363)
+.+.+.-+...|..|.|...++. +|+..-+. +.+. ...+...+|+.+.+-+-.++.+.+-+++
T Consensus 71 A~~G~v~~~ll~~ll~~pff~~~pPKStgrE-~F~~~~~~----~~l~---~~~~ls~~D~~aTlt~~TA~sI~~~~~~- 141 (180)
T 3cqy_A 71 AASGKTDPQLLAQLLSHPYFSLAYPKSTGRE-LFNQAWLE----QQLS---AFNQLNEEDIQSTLLDLTCHSIAQDILK- 141 (180)
T ss_dssp HHHSCCCHHHHHHHHTCGGGGSCSSCCCCSS-SSSHHHHH----HHTT---TCTTSCHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHH----HHHH---CCCCCCCHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 0578626899999987442025776542455-54454324----4320---1245782025567888999998755554-
Q ss_pred HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
Q ss_conf 999876214455236541334587999999999998
Q gi|254781038|r 263 FLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCV 298 (363)
Q Consensus 263 ~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~ 298 (363)
+ .....++|+||=+-|.+|.++|++.+.
T Consensus 142 ---~-----~~~~~v~v~GGGa~N~~Lm~~L~~~l~ 169 (180)
T 3cqy_A 142 ---L-----AQEGELFVCGGGAFNAELXQRLAALLP 169 (180)
T ss_dssp ---H-----CSSEEEEEESGGGGCHHHHHHHHHHCT
T ss_pred ---H-----CCCCCEEEECCCCCCHHHHHHHHHHCC
T ss_conf ---1-----356723896687568999999997678
No 22
>>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A (A:232-484)
Probab=96.39 E-value=0.087 Score=31.96 Aligned_cols=164 Identities=18% Similarity=0.174 Sum_probs=89.7
Q ss_pred EEEECCCEEEEEECCC---CCCE----ECCCCC---------CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 9970687479998375---6430----002233---------63002388889885288761035566655405733345
Q gi|254781038|r 140 LLVSGGHTQILLVRDV---AHYD----RLGTTI---------DDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFK 203 (363)
Q Consensus 140 LlvSGGhT~l~~~~~~---~~~~----ilg~T~---------Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~ 203 (363)
+.+|-|++..+.+... .+.+ ...... --..|-++|-+.+.++.... ....+..+.......-.
T Consensus 18 ~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (253)
T 2itm_A 18 AMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNV-PALIAAAQQADESAEPV 96 (253)
T ss_dssp EEEEESSSEEEEEECSSCCCCCSSSCEEEECSSTTCEEEEEEECCHHHHHHHHHHHTTCCSH-HHHHHHGGGCCTTSCCC
T ss_pred EEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHCCCCCH-HHHHHHHCCCCCCCCCC
T ss_conf 48715870689995488403754431013203597577764320026888877654033311-34431110133454445
Q ss_pred CCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 861110688-------7542210245899999985112012106889999999999999999999999987621445523
Q gi|254781038|r 204 FPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAV 276 (363)
Q Consensus 204 ~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~ 276 (363)
+..|...+. +..-+|-|+.. ..++.++..+..+.++-.+. +.++.++. ....++.
T Consensus 97 ~~~p~~~Ge~~p~~~~~~~~~~~g~~~-------------~~~~~~l~ravlEgia~~~~----~~~~~~~~-~g~~~~~ 158 (253)
T 2itm_A 97 WFLPYLSGERTPHNNPQAKGVFFGLTH-------------QHGPNELARAVLEGVGYALA----DGMDVVHA-CGIKPQS 158 (253)
T ss_dssp EEEEEEC--------CCEEEEEEEEET-------------TCCHHHHHHHHHHHHHHHHH----HHHHHHHT-TTCCCSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-------------CCCHHHHHHHHHHHHHHHHH----HHHHHHHH-HCCCCCE
T ss_conf 557664577686648544544423435-------------79989999999855335665----54443443-0478777
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC-H-HHCCCHHHHHHHHHHH
Q ss_conf 65413345879999999999986898899628-7-8877258999999999
Q gi|254781038|r 277 LVVSGGVASNHFIRASLIDLCVLHGFRFVAPP-A-RLCTDNAVMIAWAALE 325 (363)
Q Consensus 277 lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~-~-~~ctDNAaMIA~ag~~ 325 (363)
|.++||.+.|..+++.+.+.. |.++..++ + +-+.=-|||.|+.+.-
T Consensus 159 i~~~GG~s~s~~~~Q~~Adv~---g~pV~~~~~~~~a~~~GAa~~a~~~~g 206 (253)
T 2itm_A 159 VTLIGGGARSEYWRQMLADIS---GQQLDYRTGGDVGPALGAARLAQIAAN 206 (253)
T ss_dssp EEEESGGGCCHHHHHHHHHHH---CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHH---CCCEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf 999768402899999999987---990585488744899999999998658
No 23
>>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} (A:)
Probab=96.28 E-value=0.065 Score=32.83 Aligned_cols=108 Identities=9% Similarity=0.114 Sum_probs=77.9
Q ss_pred EEEEEECCCHHHEEEEEECCCCCCEEEEE-EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 68875026022077887338888418988-73113346212187145599999999699999999998389822453687
Q gi|254781038|r 7 TVIGIETSCDETAVAVVRRKDSHGEILAE-AVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 7 ~ILgIETScd~tsvaiv~~~~~~~~il~~-~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
.|||||-|---|+.|+++.++...+++.. .+.+..... .+....|..-+.+.+++.+.+.--|..+.
T Consensus 2 rvLgiDpg~~~tG~av~~~~~~~~~~i~~g~i~~~~~~~------------~~R~~~i~~~l~~~l~~~~p~~v~iE~~~ 69 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDL------------PSRLKLIYAGVTEIITQFQPDYFAIEQVF 69 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCH------------HHHHHHHHHHHHHHHHHHCCSEEEEEECC
T ss_pred EEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCH------------HHHHHHHHHHHHHHHHCCCCCEEEEEEHH
T ss_conf 899984577846899999669978999953484598777------------99999999999999863598669998412
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
Q ss_conf 40664301256779999999887514864333036776530
Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363)
Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363)
++..+.....|.-........+...++|++.|+..+-.-..
T Consensus 70 ~~~~~~s~~~l~~~~G~i~~~~~~~~ipi~~v~P~~vKk~~ 110 (158)
T 1hjr_A 70 MAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTV 110 (158)
T ss_dssp CCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHH
T ss_conf 21573578889999999999999759738997689988761
No 24
>>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, glycerol metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis KOD1} (O:1-238)
Probab=96.19 E-value=0.055 Score=33.33 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=56.9
Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 88468875026022077887338888418988731133462121871455999999996999999999983898224536
Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363)
Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363)
|++++||||-..-.+-++++ |.++++++...........+-|.+... .....+.+...+++++++++....+|.+
T Consensus 1 M~~~~lgiD~GTts~ka~l~---d~~g~~v~~~~~~~~~~~~~~g~~e~d--~~~~~~~~~~~~~~~~~~~~~~~~~i~a 75 (238)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIF---DRESNIHGIGQYEFPQHYPRPGWVEHN--PEEIWDAQLRAIKDAIQSARIEPNQIAA 75 (238)
T ss_dssp CCCEEEEEEECSSEEEEEEE---CTTCCEEEEEEEECCCBCCSTTCCEEC--HHHHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCEEEEEEECCCCEEEEEE---ECCCCEEEEEEEECCCCCCCCCCEEEC--HHHHHHHHHHHHHHHHHHCCCCHHHEEE
T ss_conf 99489999810304232379---588999999999777215899828999--9999999999999999975999522789
Q ss_pred EEEC
Q ss_conf 8740
Q gi|254781038|r 84 IAVT 87 (363)
Q Consensus 84 Iavt 87 (363)
|+++
T Consensus 76 I~~s 79 (238)
T 2zf5_O 76 IGVT 79 (238)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 9995
No 25
>>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} (A:1-119,A:314-347)
Probab=96.19 E-value=0.095 Score=31.71 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=70.3
Q ss_pred CCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 88884688750260220778873388884189887311334621218714559999999969999999999838982-24
Q gi|254781038|r 2 SKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQI-SD 80 (363)
Q Consensus 2 ~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~-~~ 80 (363)
+.|++++||||-....+-++++ |.++++++......... .+.-...-.+.+...+++++.+++++. .+
T Consensus 2 ~mm~~~vLGIDiGgT~ir~~lv---D~~G~ii~~~~~~~~~~--------~~~~~e~~~~~i~~~i~~~l~~~~~~~~~~ 70 (153)
T 2ch5_A 2 QFMAAIYGGVEGGGTRSEVLLV---SEDGKILAEADGLSTNH--------WLIGTDKCVERINEMVNRAKRKAGVDPLVP 70 (153)
T ss_dssp CSSSCEEEEEEECTTCEEEEEE---ETTSCEEEEEEECCCCH--------HHHCHHHHHHHHHHHHHHHHHHHTCCTTCC
T ss_pred CCCCCEEEEEECCCCCEEEEEE---CCCCCEEEEEEECCCCC--------CCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 7648789999906110288999---59999999999368896--------658999999999999999999749997765
Q ss_pred CCEEEECC-CCCHHHHHHHHHHHHHHHHHHH---CCCCCCCHHHHHHHH
Q ss_conf 53687406-6430125677999999988751---486433303677653
Q gi|254781038|r 81 MDSIAVTA-GPGLMGGLIVGLMTAKAISYVS---HKPFYAINHLEGHIL 125 (363)
Q Consensus 81 id~Iavt~-gPG~~~~L~vG~~~Ak~la~~~---~~Pli~VnH~~aH~~ 125 (363)
|..|+++. |+... .-+......+.+.. ++|++=.|-..+=++
T Consensus 71 I~~igig~~G~~~~---~~~~~~~~~i~~~~~~~~~pv~v~NDa~aaa~ 116 (153)
T 2ch5_A 71 LRSLGLSLSGGDQE---DAGRILIEELRDRFPYLSESYLITTDAAGSIA 116 (153)
T ss_dssp BSEEEEEETTTTCH---HHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHH
T ss_pred EEEEEEEEECCCCC---CCCEEECCHHHHHHCCCCCEEEEECHHHHHHH
T ss_conf 56656665202373---21003021244431267862999265999986
No 26
>>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, structural genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* (A:1-85,A:223-246)
Probab=96.15 E-value=0.057 Score=33.22 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=58.1
Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 88468875026022077887338888418988731133462121871455999999996999999999983898224536
Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363)
Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363)
.++++||||-..-.+-++|+ |.++++++...........+-|.+-. -...-.+.+..++++++++++++..+|.+
T Consensus 4 ~~~yilgIDiGTTsiKa~l~---D~~G~~ia~~~~~~~~~~~~~g~~Eq--dp~~~w~~i~~~i~~ll~~~~i~~~~I~a 78 (109)
T 3g25_A 4 XEKYILSIDQGTTSSRAILF---NQKGEIAGVAQREFKQYFPQSGWVEH--DANEIWTSVLAVXTEVINENDVRADQIAG 78 (109)
T ss_dssp CCCEEEEEEECSSEEEEEEE---CTTSCEEEEEEEECCCBCSSTTCCEE--CHHHHHHHHHHHHHHHHHTTTCCGGGEEE
T ss_pred CCCEEEEEECCCCCCHHHEE---CCCCCEEEEEEEECCCCCCCCCEEEE--CHHHHHHHHHHHHHHHHHHCCCCHHHEEE
T ss_conf 03078999840204011068---49998999999706712489980788--99999999999999999875999767789
Q ss_pred EEECCC
Q ss_conf 874066
Q gi|254781038|r 84 IAVTAG 89 (363)
Q Consensus 84 Iavt~g 89 (363)
|++|.-
T Consensus 79 Igis~q 84 (109)
T 3g25_A 79 IGITNQ 84 (109)
T ss_dssp EEEEEC
T ss_pred EEEECC
T ss_conf 999788
No 27
>>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural genomics, transferase, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum atcc 11170} (A:243-508)
Probab=96.12 E-value=0.12 Score=31.02 Aligned_cols=164 Identities=13% Similarity=0.072 Sum_probs=92.3
Q ss_pred EEEEECCCEEEEEECCCCC-----C---------EECCCCCCCCHHHHHHHHHHHCCCCCCHH--HHHHHHHHHCCCCC-
Q ss_conf 9997068747999837564-----3---------00022336300238888988528876103--55666554057333-
Q gi|254781038|r 139 VLLVSGGHTQILLVRDVAH-----Y---------DRLGTTIDDALGECFDKIAKSLGLPYPGG--VEIEKAALMGDGKR- 201 (363)
Q Consensus 139 ~LlvSGGhT~l~~~~~~~~-----~---------~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgG--p~ie~~A~~g~~~~- 201 (363)
.+.+|-|++..+.+..... . .......--..|-+++-+.+.++.+.... ..+.+.+....+..
T Consensus 18 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 97 (266)
T 3ifr_A 18 DVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGCXAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGAD 97 (266)
T ss_dssp EEEEEESSSEEEEECBSCCCCBTTBBCCBCSSTTCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHTSCTTGG
T ss_pred CEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 34664056405999705665556433103443300221122023543766678763135433356666667632787778
Q ss_pred CCCCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 45861110688-------75422102458999999851120121068899999999999999999999999876214455
Q gi|254781038|r 202 FKFPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQ 274 (363)
Q Consensus 202 ~~~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~ 274 (363)
-.+-.|...+. ...-+|.|+... .++.++..+..+.++-.+.. .++..+.. ...+
T Consensus 98 g~~~~p~l~Ger~p~~~~~a~~~~~Gl~~~-------------~~~~~l~rAvlEgi~f~~~~----~~~~l~~~-g~~~ 159 (266)
T 3ifr_A 98 GLVCLPYFLGEKTPIHDPFASGTFTGLSLS-------------HTRGHLWRALLEAVALAFRH----HVAVLDDI-GHAP 159 (266)
T ss_dssp GCEEECCTTCCC----CCCCCCEEESCCTT-------------CCHHHHHHHHHHHHHHHHHH----HHHHHHHH-TCCC
T ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCC-------------CCHHHHHHHHHHHHHHHHHH----HHHHHHHC-CCCC
T ss_conf 548667557776776453566233587655-------------41357788888876577889----99999861-9987
Q ss_pred CEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC-HHHCCCHHHHHHHHH
Q ss_conf 2365413345879999999999986898899628-788772589999999
Q gi|254781038|r 275 AVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP-ARLCTDNAVMIAWAA 323 (363)
Q Consensus 275 ~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~-~~~ctDNAaMIA~ag 323 (363)
+.|.++||.+.|..+++.+.++. |.+++.|. .+-+.--|||+|..+
T Consensus 160 ~~i~~~GG~s~s~~~~Q~~Advl---g~~v~~~~~~e~~a~GaA~~A~~~ 206 (266)
T 3ifr_A 160 QRFFASDGGTRSRVWXGIXADVL---QRPVQLLANPLGSAVGAAWVAAIG 206 (266)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHH---TSCEEEEECCSTHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHH---CCEEEECCCCCHHHHHHHHHHHHH
T ss_conf 77999895300899999999988---983897578727999999999997
No 28
>>3hz6_A Xylulokinase; xylulose, structural genomic, manolate, transferase, structural genomics, PSI-2, protein structure initiative; HET: ADP XUL; 1.65A {Chromobacterium violaceum} (A:242-511)
Probab=95.65 E-value=0.18 Score=29.72 Aligned_cols=162 Identities=17% Similarity=0.056 Sum_probs=91.8
Q ss_pred EEEECCCEEEEEECCC---CC------CEECCCCCC---------CCHHHHHHHHHHHCCCCCCHHHH----HHHHHHHC
Q ss_conf 9970687479998375---64------300022336---------30023888898852887610355----66655405
Q gi|254781038|r 140 LLVSGGHTQILLVRDV---AH------YDRLGTTID---------DALGECFDKIAKSLGLPYPGGVE----IEKAALMG 197 (363)
Q Consensus 140 LlvSGGhT~l~~~~~~---~~------~~ilg~T~D---------da~Ge~~DK~ar~Lgl~yPgGp~----ie~~A~~g 197 (363)
+.+|-|++..+.+-.. .+ ........| -..|-+++.+.+.++.+-..... ....+...
T Consensus 18 ~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (270)
T 3hz6_A 18 AYLHLGTTGWLARLTQTDPVGDXPVGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHXAAAEVQG 97 (270)
T ss_dssp EEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEEEEEEEESSSHHHHHHHGGGGTCCTTSCSHHHHHHHHHHHTT
T ss_pred EEEECCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
T ss_conf 59942896079997278863200135421001236884342054677799999999974212003567788888775304
Q ss_pred CC-CCCCCCCHHCCCCC-------CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 73-33458611106887-------54221024589999998511201210688999999999999999999999998762
Q gi|254781038|r 198 DG-KRFKFPCPLVQGTL-------CDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKA 269 (363)
Q Consensus 198 ~~-~~~~~P~p~~~~~~-------~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~ 269 (363)
.+ ..-.+-.|...+.+ ..=+|.||.. ..++.++..++.+.++-.+..-++ ..
T Consensus 98 ~~~~~g~~~~P~~~G~r~p~~~~~~~g~~~Gl~~-------------~~~~~~l~ravlEgia~~~~~~~e----~l--- 157 (270)
T 3hz6_A 98 VTVPDGLLFVPYLHAERCPVELPAPRGALLGVTG-------------ATTRAQILLAVLEGAALSLRWCAE----LL--- 157 (270)
T ss_dssp CCCCTTCEEEEESSCBCSSSCBSSCEEEEECCCT-------------TCCHHHHHHHHHHHHHHHHHHHHH----HH---
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC-------------CCCHHHHHHHHHHHHHHHHHHHHH----HH---
T ss_conf 6688874037875546698778456511017772-------------233479999999999999999999----96---
Q ss_pred CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEE-CCH-HHCCCHHHHHHHHHH
Q ss_conf 1445523654133458799999999999868988996-287-887725899999999
Q gi|254781038|r 270 FPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVA-PPA-RLCTDNAVMIAWAAL 324 (363)
Q Consensus 270 ~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~-P~~-~~ctDNAaMIA~ag~ 324 (363)
...+++.+.++||-+.|..+++.+.+++ |.+++. +.+ +-+.=-|||+|+.+.
T Consensus 158 ~~~~~~~i~v~GGgs~s~~w~q~~Advl---g~~v~~~~~~~ea~a~GaA~~A~~~~ 211 (270)
T 3hz6_A 158 GXEKVGLLKVVGGGARSEAWLRXIADNL---NVSLLVKPDAHLHPLRGLAALAAVEL 211 (270)
T ss_dssp TGGGCCEEEEESGGGGCHHHHHHHHHHH---TCEEEECCCGGGHHHHHHHHHHHHHT
T ss_pred HCCCCCEEEEECCHHHCHHHHHHHHHHH---CCCEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 0799887999825554899999999986---89858768887269999999999983
No 29
>>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* (A:248-503)
Probab=95.64 E-value=0.19 Score=29.69 Aligned_cols=139 Identities=13% Similarity=0.076 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCC-------CCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 336300238888988528876103556665540573334586111068-------8754221024589999998511201
Q gi|254781038|r 164 TIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQG-------TLCDFSFSGLKTSVQKTICAFDVLE 236 (363)
Q Consensus 164 T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~-------~~~dFSFSGLkTav~~~i~~~~~~~ 236 (363)
...-..|-+++.+.+..+..+. ...+.++.......-.+..|...+ .+..=+|.|+..
T Consensus 62 ~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~G~~~p~~~~~~~g~~~gl~~------------- 126 (256)
T 2w40_A 62 GSIGTAGSGVSWLLKNKLIDDP--SEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYGMTF------------- 126 (256)
T ss_dssp EEESCSHHHHHHHHHTTSSSCG--GGHHHHHHHCCSCTTCEEECCTTCBCTTTCBTTCCEEEEEECT-------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCC-------------
T ss_conf 8999999999999873554538--9999987414366884123566776788765222102348888-------------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHH-HCCC
Q ss_conf 21068899999999999999999999999876214-455236541334587999999999998689889962878-8772
Q gi|254781038|r 237 KQDIADICASFQVTVVRILQARLKQGFLLFRKAFP-HKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPAR-LCTD 314 (363)
Q Consensus 237 ~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~-~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~-~ctD 314 (363)
..++.++..++.+.++-.+...++.. +.... ...+.+.++||.+.|..+++.+.++. |.+++.+..+ -+.=
T Consensus 127 ~~~~~~l~rA~lEgia~~~~~~~~~l----~~~~~~~~~~~i~~~GG~s~s~~~~Q~~Advl---g~pV~~~~~~ea~a~ 199 (256)
T 2w40_A 127 NTERSHIVRALLEGIAFQLNEIVDSL----TSDMGIEMLHVLRCDGGMTKNKPFMQFNSDII---NTKIEVSKYKEVTSL 199 (256)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHH----HHHHTCSCCSCEEEESGGGGCHHHHHHHHHHH---TSCEEEESCSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCEEEEECCCHHCHHHHHHHHHHH---CCEEEECCCCCHHHH
T ss_conf 89989999999999999999999999----99729897628999576320999999999988---990794798866999
Q ss_pred HHHHHHHHHH
Q ss_conf 5899999999
Q gi|254781038|r 315 NAVMIAWAAL 324 (363)
Q Consensus 315 NAaMIA~ag~ 324 (363)
-|||.|..+.
T Consensus 200 GaA~~A~~a~ 209 (256)
T 2w40_A 200 GAAVLAGLEV 209 (256)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
T ss_conf 9999999970
No 30
>>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} (A:279-473)
Probab=95.53 E-value=0.2 Score=29.42 Aligned_cols=150 Identities=13% Similarity=0.063 Sum_probs=80.1
Q ss_pred EEEEECCCEEEEEEC-CC--CCCEECC-------------CCCCCCHHHHHHHHHHHCCCCCC-----------HHHHHH
Q ss_conf 999706874799983-75--6430002-------------23363002388889885288761-----------035566
Q gi|254781038|r 139 VLLVSGGHTQILLVR-DV--AHYDRLG-------------TTIDDALGECFDKIAKSLGLPYP-----------GGVEIE 191 (363)
Q Consensus 139 ~LlvSGGhT~l~~~~-~~--~~~~ilg-------------~T~Dda~Ge~~DK~ar~Lgl~yP-----------gGp~ie 191 (363)
-+.+|-|++..+.+- +. .+.+.-+ +..=-..|-++|.+.+.+...-- -....+
T Consensus 11 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (195)
T 3jvp_A 11 KLVMAMGTSICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEE 90 (195)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHH
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
T ss_conf 23898478765576566542147765023224457503555422035269999987143057799999827633456777
Q ss_pred HHHHHCCCCCCCCCCHHCCC-------CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65540573334586111068-------87542210245899999985112012106889999999999999999999999
Q gi|254781038|r 192 KAALMGDGKRFKFPCPLVQG-------TLCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFL 264 (363)
Q Consensus 192 ~~A~~g~~~~~~~P~p~~~~-------~~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~ 264 (363)
+++.......-.+..|...+ ....=+|.|++. ..++.++..++.+.++-.+ +..++
T Consensus 91 ~~~~~~~~~~gl~~~p~~~G~~~p~~~~~~~~~~~Gl~~-------------~~~~~~~~ra~~Egia~~~----~~~~~ 153 (195)
T 3jvp_A 91 KASQLRPGESGLLALDWWNGNRSILVDTELSGMLLGYTL-------------QTKPEEIYRALLEATAFGT----RAIVD 153 (195)
T ss_dssp HHTSSCTTSSCCEEECCTTCCCTTTCCSSCCEEEEEECT-------------TCCHHHHHHHHHHHHHHHH----HHHHH
T ss_pred HHHHCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCC-------------CCCHHHHHHHHHHHHHHHH----HHHHH
T ss_conf 765338877760353022113577654233303578887-------------7758999999999999999----99999
Q ss_pred HHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 98762144552365413345879999999999986898899628
Q gi|254781038|r 265 LFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 265 ~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
..++.....++.++++||.+.|..+++.+.++. |.++..|.
T Consensus 154 ~l~~~~~~~~~~i~~~GG~s~n~~~~Qi~Adi~---g~pv~~~~ 194 (195)
T 3jvp_A 154 AFHGRGVEVHELYACGGLPQKNHLLMQIFADVT---NREIKVAA 194 (195)
T ss_dssp HHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH---TSCEEEBC
T ss_pred HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH---CCEEEECC
T ss_conf 998539997679997287301889999999988---98379578
No 31
>>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, structural genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum atcc 12472} (A:1-121,A:280-305)
Probab=95.08 E-value=0.19 Score=29.61 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=56.4
Q ss_pred CCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88846887502602207788733888841898873113346212187145599999999699999999998389822453
Q gi|254781038|r 3 KIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 3 ~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363)
.+..++||||--.-.+-++++ |.++++++.....-.... .-.....+.+..+++++++++++...++.
T Consensus 8 ~~~~y~LGIDiGgT~ik~~l~---D~~G~ii~~~~~~~~~~~---------~~~e~~~~~i~~~i~~ll~~~~i~~~~i~ 75 (147)
T 1zc6_A 8 PSIRYLIGVDGGGTGTRIRLH---ASDGTPLAXAEGGASALS---------QGIAKSWQAVLSTLEAAFQQAGLPAAPAS 75 (147)
T ss_dssp CCCCEEEEEEECSSCEEEEEE---ETTCCEEEEEEESCCCGG---------GCHHHHHHHHHHHHHHHHHHTTCCCCCGG
T ss_pred CCCCEEEEEECCCCEEEEEEE---CCCCCEEEEEEECCCCCC---------CCHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 888789999928221899999---899989999995699856---------69999999999999999998499965554
Q ss_pred EEEECCC-CCH
Q ss_conf 6874066-430
Q gi|254781038|r 83 SIAVTAG-PGL 92 (363)
Q Consensus 83 ~Iavt~g-PG~ 92 (363)
.+++..+ ||.
T Consensus 76 ~~gvgi~~~g~ 86 (147)
T 1zc6_A 76 ACAIGLGLSGV 86 (147)
T ss_dssp GEEEEEEESCC
T ss_pred CEEEECCCCCC
T ss_conf 22320256876
No 32
>>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} (A:106-216)
Probab=94.96 E-value=0.17 Score=29.96 Aligned_cols=97 Identities=18% Similarity=0.236 Sum_probs=70.6
Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 88468875026022077887338888418988731133462121871455999999996999999999983898224536
Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363)
Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363)
|..+++|||-+...+.++++ |.+++++........... ...-.+.+...+++++++.+....++-+
T Consensus 1 ma~~~igidig~~~i~~~l~---d~~g~ii~~~~~~~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~~~i~g 66 (111)
T 1z05_A 1 LGWQFLSMRLGRGYLTIALH---ELGGEVLIDTKIDIHEID-----------QDDVLARLLFEIEEFFQTYAAQLDRVTS 66 (111)
T ss_dssp TTEEEEEEEEETTEEEEEEE---ETTSCEEEEEEEECCCCB-----------HHHHHHHHHHHHHHHHHHTTTTCCEEEE
T ss_pred CEEEEEEEEECCCEEEEEEE---CCCCCEEEEEEECCCCCC-----------HHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 71699999989998999999---699979999961345798-----------7899999999999999970766562467
Q ss_pred EEECCCCCHHH----------H-HHHHHHHHHHHHHHHCCCCC
Q ss_conf 87406643012----------5-67799999998875148643
Q gi|254781038|r 84 IAVTAGPGLMG----------G-LIVGLMTAKAISYVSHKPFY 115 (363)
Q Consensus 84 Iavt~gPG~~~----------~-L~vG~~~Ak~la~~~~~Pli 115 (363)
|+++. ||... . -.-+..++..+...+++|++
T Consensus 67 igi~~-~g~v~~~~~~~~~~~~~~w~~~~l~~~l~~~~~~pv~ 108 (111)
T 1z05_A 67 IAITL-PGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVF 108 (111)
T ss_dssp EEEEE-SSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEE
T ss_pred EEEEE-ECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHEE
T ss_conf 86532-0254477762325775201002038887544322011
No 33
>>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural genomics, transferase, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum atcc 11170} (A:1-242)
Probab=94.90 E-value=0.11 Score=31.22 Aligned_cols=82 Identities=18% Similarity=0.155 Sum_probs=55.6
Q ss_pred CCCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 98888468875026022077887338888418988731133462121871455999999996999999999983898224
Q gi|254781038|r 1 MSKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISD 80 (363)
Q Consensus 1 m~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~ 80 (363)
|++ ..++||||-..-..-++++ |.++++++...........+ +| .-|.-.....+.+...+++++.+++....+
T Consensus 3 m~~-~~~~lgIDiGTts~Ka~l~---d~~g~~i~~~~~~~~~~~~~-~g-~~e~d~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (242)
T 3ifr_A 3 LAQ-GRQVIGLDIGTTSTIAILV---RLPDTVVAVASRPTTLSSPH-PG-WAEEDPAQWWDNARAVLAELKTTAGESDWR 76 (242)
T ss_dssp -----CEEEEEEECSSEEEEEEE---ETTTEEEEEEEEECCCBCSS-TT-CCEECHHHHHHHHHHHHHHHHHHHCGGGCC
T ss_pred CCC-CCEEEEEECCCCCEEEEEE---ECCCCEEEEEEEECCCCCCC-CC-CEEECHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 778-9889999772223376799---68899999999856701589-98-089999999999999999999963988677
Q ss_pred CCEEEECC
Q ss_conf 53687406
Q gi|254781038|r 81 MDSIAVTA 88 (363)
Q Consensus 81 id~Iavt~ 88 (363)
|.+|++|.
T Consensus 77 i~~Ig~s~ 84 (242)
T 3ifr_A 77 PGGICVTG 84 (242)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEC
T ss_conf 23999978
No 34
>>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* (A:1-266,A:476-506)
Probab=94.80 E-value=0.21 Score=29.36 Aligned_cols=81 Identities=11% Similarity=0.156 Sum_probs=54.4
Q ss_pred CCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88846887502602207788733888841898873113346212187145599999999699999999998389822453
Q gi|254781038|r 3 KIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 3 ~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363)
.|.+++||||-..-..-++++ |.++++++...........+-|.+.. -..+-.+.+...+++++.+++.+..+|.
T Consensus 2 sm~~~vlgIDiGTtsvK~~v~---d~~g~~v~~~~~~~~~~~~~~g~~eq--d~~~~~~~~~~~i~~~~~~~~~~~~~i~ 76 (297)
T 3l0q_A 2 SLASYFIGVDVGTGSARAGVF---DLQGRXVGQASREITXFKPKADFVEQ--SSENIWQAVCNAVRDAVNQADINPIQVK 76 (297)
T ss_dssp --CCEEEEEEECSSEEEEEEE---ETTSCEEEEEEEECCCEEEETTEEEE--CHHHHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCEEEEEEECCCCEEEEEE---CCCCCEEEEEEEECCCCCCCCCCEEE--CHHHHHHHHHHHHHHHHHHCCCCHHHEE
T ss_conf 878779999803545255588---29998999999856627689994899--9999999999999999997499879959
Q ss_pred EEEECC
Q ss_conf 687406
Q gi|254781038|r 83 SIAVTA 88 (363)
Q Consensus 83 ~Iavt~ 88 (363)
+|++|.
T Consensus 77 aI~is~ 82 (297)
T 3l0q_A 77 GLGFDA 82 (297)
T ss_dssp EEEEEE
T ss_pred EEEECC
T ss_conf 999888
No 35
>>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} (A:1-74,A:255-284,A:436-494)
Probab=94.77 E-value=0.32 Score=28.08 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=69.5
Q ss_pred CCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88846887502602207788733888841898873113346212187145599999999699999999998389822453
Q gi|254781038|r 3 KIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 3 ~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363)
.|+++|||||-..-.+-+++++. .++++++...+.+..... ++.+.+-..+.+++++. ++..+|.
T Consensus 2 sm~~~~lgID~Gtt~~k~~l~d~--~~g~ii~~~~~p~~g~~e------------~d~~~~~~~~~~~~~~~-~~~~~I~ 66 (163)
T 3i8b_A 2 SLRTLVAGVDTSTQSCKVRVTDA--ETGELVRFGQAKHPNGTS------------VDPSYWWSAFQEAAEQA-GGLDDVS 66 (163)
T ss_dssp CCSCEEEEEEECSSEEEEEEEET--TTCCEEEEEEEECCSSSE------------ECTHHHHHHHHHHHHHT-TCSTTEE
T ss_pred CCCCEEEEEECCCCCEEEEEEEC--CCCEEEEEEEECCCCCCE------------ECHHHHHHHHHHHHHHH-CCCCCCE
T ss_conf 87757999972550348899989--999699999600889810------------89999999999999972-7710446
Q ss_pred EEEECCCCCHHHHHH-----------------------HHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 687406643012567-----------------------799999998875148643330367765301
Q gi|254781038|r 83 SIAVTAGPGLMGGLI-----------------------VGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 83 ~Iavt~gPG~~~~L~-----------------------vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
+|++|.-=|..-+++ ----..+-++-.+++|+.-++.-|+-.+-+
T Consensus 67 aIgis~~~gv~~~~~~~l~~~~~~g~~i~~i~~~GGgsrs~~~~qi~adv~g~~v~~~~~~E~~a~GA 134 (163)
T 3i8b_A 67 ALAVGGQQPAIAGKNVEGGCLLAPGGGDNAXASLGLGXKSEAIRTLAPSILGXDVTRPATDEYVAIGA 134 (163)
T ss_dssp EEEEEECSTTTTTTTSTTCCEECCCEEHHHHHHHHTTCGCHHHHHHHHHHHTSCEEEECCCCHHHHHH
T ss_pred EEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHH
T ss_conf 99994687999753888776424655655665403455088999999998799469678885899999
No 36
>>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis V583} (A:1-131,A:308-326)
Probab=94.73 E-value=0.21 Score=29.30 Aligned_cols=111 Identities=17% Similarity=0.132 Sum_probs=81.6
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
..+++|||=.-..+.++++ |.+++++..........+.. ..-.+.+..++++.+.+.+.+..++-.|
T Consensus 5 ~~~~iGIdig~t~i~~~l~---Dl~g~ii~~~~~~~~~~~~~----------~~~~~~i~~~i~~~~~~~~~~~~~i~gI 71 (150)
T 2qm1_A 5 DKKIIGIDLGGTTIKFAIL---TTDGVVQQKWSIETNILEDG----------KHIVPSIIESIRHRIDLYNXKKEDFVGI 71 (150)
T ss_dssp GCEEEEEEECSSEEEEEEE---ETTCCEEEEEEEECCCTTTT----------TTHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCEEEEEEECCCEEEEEEE---CCCCCEEEEEEEECCCCCCH----------HHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 9869999987233899999---39998999999847988898----------9999999999999999724554452010
Q ss_pred EECC--------CCCH-HHHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf 7406--------6430-1256--77999999988751486433303677653013
Q gi|254781038|r 85 AVTA--------GPGL-MGGL--IVGLMTAKAISYVSHKPFYAINHLEGHILTAR 128 (363)
Q Consensus 85 avt~--------gPG~-~~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~ 128 (363)
+++. |... .+.+ .-+......|+..++.|++=.|...+-+++-.
T Consensus 72 gia~pg~vd~~~~~i~~~~~~~~w~~~~l~~~l~~~~~~Pv~i~ND~na~alaE~ 126 (150)
T 2qm1_A 72 GXGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGER 126 (150)
T ss_dssp EEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHH
T ss_conf 0122321122333334543222233451788997721530686325433344454
No 37
>>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics, JCSG; 2.46A {Thermotoga maritima} (A:86-211,A:358-380)
Probab=94.17 E-value=0.21 Score=29.34 Aligned_cols=111 Identities=17% Similarity=0.175 Sum_probs=80.9
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
.++||||-....+.++++ |.+++++..........+. ...-.+.+..++++++++.+.+..++-+|+
T Consensus 2 ~y~lGIdiG~t~i~~~l~---d~~G~il~~~~~~~~~~~~----------~~~~~~~i~~~i~~~~~~~~~~~~~i~gIg 68 (149)
T 2hoe_A 2 AYVLGIEVTRDEIAACLI---DASXNILAHEAHPLPSQSD----------REETLNVXYRIIDRAKDXXEKLGSKLSALT 68 (149)
T ss_dssp CEEEEEEECSSEEEEEEE---ETTCCEEEEEEEECCSSCC----------HHHHHHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCEEEEEECCCEEEEEEE---ECCCCEEEEEEECCCCCCC----------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 712578998988999999---2899899876432777789----------899999999999999998653178524674
Q ss_pred ECCCCCHH----------HH-HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
Q ss_conf 40664301----------25-67799999998875148643330367765301322
Q gi|254781038|r 86 VTAGPGLM----------GG-LIVGLMTAKAISYVSHKPFYAINHLEGHILTARLT 130 (363)
Q Consensus 86 vt~gPG~~----------~~-L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~ 130 (363)
++.-- .+ +. -.-+....+.|...+++|++=.|......+.-.+.
T Consensus 69 ia~pG-~V~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~pv~v~NDa~~~alaE~~~ 123 (149)
T 2hoe_A 69 VAAPG-PIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADXGAVGEKWY 123 (149)
T ss_dssp EEESS-CEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHHH
T ss_pred ECCCC-CEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHH
T ss_conf 03222-05347408973454564688478899987475334303405889877753
No 38
>>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* (A:1-85,A:223-247)
Probab=94.02 E-value=0.35 Score=27.84 Aligned_cols=81 Identities=15% Similarity=0.126 Sum_probs=52.8
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCC
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999--8389822453
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLL--RANMQISDMD 82 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~--~a~~~~~~id 82 (363)
.+++||||--.-.+-++|+ |.++++++...........+-|.+-.. ..+=-+.+..+++++++ +++++..+|-
T Consensus 3 m~yvLgIDiGTts~Ra~l~---D~~G~iia~~~~~~~~~~~~~G~~EqD--p~~~w~ai~~~i~~ll~~~~~~i~~~~I~ 77 (110)
T 2w40_A 3 MNVILSIDQSTQSTKVFFY---DEELNIVHSNNLNHEQKCLKPGWYEHD--PIEIMTNLYNLMNEGIKVLKDKYTSVIIK 77 (110)
T ss_dssp CEEEEEEEECSSEEEEEEE---ETTCCEEEEEEEECCCBCCSTTCCEEC--HHHHHHHHHHHHHHHHHHHHHHSSSCEEE
T ss_pred CCEEEEEECCHHCCHHHEE---CCCCCEEEEEEEECCCCCCCCCCEEEC--HHHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 5599999731111012168---399989999997067536999838989--99999999999999999876048856669
Q ss_pred EEEECCCC
Q ss_conf 68740664
Q gi|254781038|r 83 SIAVTAGP 90 (363)
Q Consensus 83 ~Iavt~gP 90 (363)
+|++|.-=
T Consensus 78 aIgis~qr 85 (110)
T 2w40_A 78 CIGITNQR 85 (110)
T ss_dssp EEEEEECS
T ss_pred EEEEECCC
T ss_conf 99981798
No 39
>>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} (A:245-504)
Probab=94.02 E-value=0.48 Score=26.83 Aligned_cols=139 Identities=15% Similarity=0.072 Sum_probs=80.6
Q ss_pred CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC--CCCCCCHHCC-----CCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 63002388889885288761035566655405733--3458611106-----8875422102458999999851120121
Q gi|254781038|r 166 DDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGK--RFKFPCPLVQ-----GTLCDFSFSGLKTSVQKTICAFDVLEKQ 238 (363)
Q Consensus 166 Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~--~~~~P~p~~~-----~~~~dFSFSGLkTav~~~i~~~~~~~~~ 238 (363)
--+.|-++|-..+.++.... -..++.+++..... -+-+|...-. .....=+|-|+.. ..
T Consensus 63 ~~~~g~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~gl~~~p~l~Ger~p~~~~~~~g~~~gl~~-------------~~ 128 (260)
T 2d4w_A 63 IAVTGSLVQWLRDNLGMFED-APDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALVGLTR-------------YV 128 (260)
T ss_dssp ESCSHHHHHHHHHTTCTTTT-CSCTHHHHTTSSSCTTCEEECTTCCCSTTTCCCCSCEEEEEECS-------------SC
T ss_pred HHHHHHHHHHHHHHCCCCHH-HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCC-------------CC
T ss_conf 99989999999974422113-45666543036778861786247887577778776736520011-------------12
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHH-HCCCHHH
Q ss_conf 068899999999999999999999999876214455236541334587999999999998689889962878-8772589
Q gi|254781038|r 239 DIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPAR-LCTDNAV 317 (363)
Q Consensus 239 ~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~-~ctDNAa 317 (363)
++.++..++.+.++=.+...++. .++......+.|.++||-+-|..+++.+.++. |.+++.+... -+.=-||
T Consensus 129 ~~~~l~rAvlEgi~f~~~~~l~~----l~~~~g~~~~~i~~~GG~s~~~~~~Qi~Advl---g~pv~~~~~~ea~~~GaA 201 (260)
T 2d4w_A 129 NRNHIARAALEATAFQSREVVDA----MNADSGVDLTELRVDGGMVANELLMQFQADQL---GVDVVRPKVAETTALGAA 201 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH----HHHHHSCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEESCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCEEEEECCHHHCHHHHHHHHHHH---CCEEEECCCCCHHHHHHH
T ss_conf 38999999887889999999999----99863989787999895443699999999998---990596798857999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254781038|r 318 MIAWAALE 325 (363)
Q Consensus 318 MIA~ag~~ 325 (363)
|+|+.+.-
T Consensus 202 ~~A~~~~g 209 (260)
T 2d4w_A 202 YAAGIAVG 209 (260)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHCC
T ss_conf 99999739
No 40
>>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} (A:1-96,A:187-278,A:474-509)
Probab=93.66 E-value=0.29 Score=28.38 Aligned_cols=89 Identities=19% Similarity=0.192 Sum_probs=56.9
Q ss_pred CCCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCC----------CCC-CCCC--CCCHHHHHHHHHHHHHHH
Q ss_conf 988884688750260220778873388884189887311334----------621-2187--145599999999699999
Q gi|254781038|r 1 MSKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQID----------QHG-HYGG--VVPEVAARAHVDVLDILI 67 (363)
Q Consensus 1 m~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~----------~~~-~~GG--v~P~~A~~~H~~~l~~li 67 (363)
|+. +.++||||-+.-.+=+++++. .+|++++.....+.. .+. +-|. -.|+ .=-+.+...+
T Consensus 1 M~~-~~~~lgiD~GTts~ka~l~d~--~~G~iia~~~~~~~~~~~~~~~~~~~~~p~~g~~Eqdp~----~~w~~~~~~i 73 (224)
T 3jvp_A 1 MSL-TKYTIGVDYGTESGRAVLIDL--SNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPL----DYVEVLTTSV 73 (224)
T ss_dssp -----CEEEEEEECSSEEEEEEEET--TTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHH----HHHHHHTTHH
T ss_pred CCC-CCEEEEEECCCCCEEEEEEEC--CCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECHH----HHHHHHHHHH
T ss_conf 987-807999970354528899988--999099999986024432113788886789881677899----9999999999
Q ss_pred HHHHHHCCCCCCCCCEEEECCC-CCHHHHH
Q ss_conf 9999983898224536874066-4301256
Q gi|254781038|r 68 KQTLLRANMQISDMDSIAVTAG-PGLMGGL 96 (363)
Q Consensus 68 ~~~l~~a~~~~~~id~Iavt~g-PG~~~~L 96 (363)
++++++++++..+|.+|++|.- |-+....
T Consensus 74 ~~~~~~~~i~~~~I~aIg~s~q~~dyl~~~ 103 (224)
T 3jvp_A 74 PAVMKESGVDADDVIGIGVDFTATDWIVSQ 103 (224)
T ss_dssp HHHHHC---CCSCEEEEEEEECSHHHHHHH
T ss_pred HHHHHHCCCCHHHEEEEEEECCCCCHHHHC
T ss_conf 999998498988848999846884033312
No 41
>>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding protein, helix-turn-helix, phosphotransferase system, metalloprotein; 2.70A {Escherichia coli} (A:83-194)
Probab=93.48 E-value=0.25 Score=28.77 Aligned_cols=99 Identities=18% Similarity=0.181 Sum_probs=72.4
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
..++||||=.-..+.++++ |.+++++............. .-.+.+..++++++++.+++...+-+|
T Consensus 2 ~~~~igidig~t~i~~~l~---d~~g~ii~~~~~~~~~~~~~-----------~~~~~i~~~i~~~~~~~~~~~~~i~gi 67 (112)
T 1z6r_A 2 AWHYLSLRISRGEIFLALR---DLSSKLVVEESQELALKDDL-----------PLLDRIISHIDQFFIRHQKKLERLTSI 67 (112)
T ss_dssp TCEEEEEEEETTEEEEEEE---ETTCCEEEEEEEECCSSCSS-----------CHHHHHHHHHHHHHHHTGGGCCCEEEE
T ss_pred CCEEEEEEECCCEEEEEEE---CCCCCEEEEEEEECCCCCHH-----------HHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 7789999988988999998---79998899999842568807-----------999999999999999725544560079
Q ss_pred EECC-CC-----C---HHHHH--HHHHHHHHHHHHHHCCCCCCC
Q ss_conf 7406-64-----3---01256--779999999887514864333
Q gi|254781038|r 85 AVTA-GP-----G---LMGGL--IVGLMTAKAISYVSHKPFYAI 117 (363)
Q Consensus 85 avt~-gP-----G---~~~~L--~vG~~~Ak~la~~~~~Pli~V 117 (363)
+++. |+ | ..+-+ .-+...++.|...+++|++=.
T Consensus 68 gi~~~g~vd~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~Pv~i~ 111 (112)
T 1z6r_A 68 AITLPGIIDTENGIVHRXPFYEDVKEXPLGEALEQHTGVPVYIQ 111 (112)
T ss_dssp EEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEE
T ss_pred EEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 84023356778776954588654457736889876540122235
No 42
>>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} (A:1-244)
Probab=93.00 E-value=0.69 Score=25.76 Aligned_cols=78 Identities=18% Similarity=0.235 Sum_probs=54.3
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
+++||||--.-.+-++++ |.++++++............ .-..|.-.....+.+..+++++.++.+....++.+|+
T Consensus 2 ~~~lgID~GTts~ka~l~---d~~g~~i~~~~~~~~~~~~~--~~~~e~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 76 (244)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVF---DHSGEIYSTGQLEHDQIFPR--AGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVG 76 (244)
T ss_dssp CEEEEEEECSSEEEEEEE---CTTSCEEEEEEEECCCBCSS--TTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEEEECCCCCHHEEE---CCCCCEEEEEEECCCCCCCC--CCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHEEEEE
T ss_conf 699999711202012078---39898999999717803389--9809999999999999999999997599877757999
Q ss_pred ECC
Q ss_conf 406
Q gi|254781038|r 86 VTA 88 (363)
Q Consensus 86 vt~ 88 (363)
++.
T Consensus 77 ~s~ 79 (244)
T 2d4w_A 77 ITN 79 (244)
T ss_dssp EEE
T ss_pred EEC
T ss_conf 977
No 43
>>3hz6_A Xylulokinase; xylulose, structural genomic, manolate, transferase, structural genomics, PSI-2, protein structure initiative; HET: ADP XUL; 1.65A {Chromobacterium violaceum} (A:1-241)
Probab=93.00 E-value=0.7 Score=25.71 Aligned_cols=80 Identities=11% Similarity=0.152 Sum_probs=47.1
Q ss_pred CCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88846887502602207788733888841898873113346212187145599999999699999999998389822453
Q gi|254781038|r 3 KIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 3 ~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363)
.|+++|||||-..-.+-++++ |.++++++............-|.+-. -.....+.+..+++++ .+...+..++.
T Consensus 2 sm~~~vlgiDiGTts~Ka~l~---d~~g~vv~~~~~~~~~~~~~~g~~e~--~~~~~~~~~~~~~~~l-~~~~~~~~~i~ 75 (241)
T 3hz6_A 2 SLAFYIATFDIGTTEVKAALA---DRDGGLHFQRSIALETYGDGNGPVEQ--DAGDWYDAVQRIASSW-WQSGVDARRVS 75 (241)
T ss_dssp CCCCEEEEEEECSSEEEEEEE---CTTSCEEEEEEEECCCBSTTSSCCEE--CHHHHHHHHHHHHHHH-HTTTCCGGGEE
T ss_pred CCCEEEEEEEECCCCEEHEEE---ECCCCEEEEEEEECCCCCCCCCCEEE--CHHHHHHHHHHHHHHH-HHCCCCHHHEE
T ss_conf 744279999850011012068---28899999999835725689997568--9999999999999999-97399965647
Q ss_pred EEEECC
Q ss_conf 687406
Q gi|254781038|r 83 SIAVTA 88 (363)
Q Consensus 83 ~Iavt~ 88 (363)
+|+++.
T Consensus 76 aI~~s~ 81 (241)
T 3hz6_A 76 AIVLSG 81 (241)
T ss_dssp EEEEEE
T ss_pred EEEEEC
T ss_conf 999946
No 44
>>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuclease-H fold, sugar kinase, glucose, conformational change; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* (A:106-274)
Probab=92.72 E-value=0.77 Score=25.46 Aligned_cols=56 Identities=7% Similarity=-0.038 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 99999999999999999999998762144552365413345879999999999986898899
Q gi|254781038|r 244 CASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFV 305 (363)
Q Consensus 244 aasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~ 305 (363)
|...-+...+.|..-+...+..+ ++..++++||++.+..+++.+++..+++-++..
T Consensus 111 a~~i~~~~~~~la~~i~~l~~~l------~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~ 166 (169)
T 2e2o_A 111 AMDILKQGAELLASQAVYLARKI------GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISD 166 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------CCCEEEEECCHHCCHHHHHHHHHHHHCCEECCC
T ss_conf 77888887768999999999861------997599989233487899999999736745366
No 45
>>3eo3_A Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-acetylmannosamine kinase; non-protein kinase, sialic acid biosynthesis; 2.84A {Homo sapiens} (A:1-144,A:315-333)
Probab=92.71 E-value=0.39 Score=27.50 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=81.1
Q ss_pred CCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88846887502602207788733888841898873113346212187145599999999699999999998389822453
Q gi|254781038|r 3 KIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 3 ~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363)
...+++||||=.-+.+.++++ |.+++++........... ..-.+.+..++++++++.+.+..++-
T Consensus 17 ~~~~~vlgIdiG~t~i~~~l~---D~~G~iia~~~~~~~~~~------------~~~~~~l~~~i~~~~~~~~~~~~~i~ 81 (163)
T 3eo3_A 17 QGTLSALAVDLGGTNLRVAIV---SMKGEIVKKYTQFNPKTY------------EERINLILQMCVEAAAEAVKLNCRIL 81 (163)
T ss_dssp --CCEEEEEEECSSEEEEEEE---ETTSCEEEEEEEECCSSH------------HHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEEEECCCEEEEEEE---CCCCCEEEEEEECCCCCH------------HHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 887028999977111999999---499979999996899987------------89999999999999998621368456
Q ss_pred EEEECC-CC-----C---HHHH---HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
Q ss_conf 687406-64-----3---0125---67799999998875148643330367765301322
Q gi|254781038|r 83 SIAVTA-GP-----G---LMGG---LIVGLMTAKAISYVSHKPFYAINHLEGHILTARLT 130 (363)
Q Consensus 83 ~Iavt~-gP-----G---~~~~---L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~ 130 (363)
+|+++. |+ | ..+- -..+....+-|...+++|++=.|+..+=+++-.+.
T Consensus 82 gIgis~pg~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~~~~~pV~i~NDa~~aalaE~~~ 141 (163)
T 3eo3_A 82 GVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKF 141 (163)
T ss_dssp EEEEEC------------------------CCHHHHHHHHCSCEEEECHHHHHHHHHHHT
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHH
T ss_conf 898415643212331001333345543233116777650278667404432123899861
No 46
>>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuclease-H fold, sugar kinase, glucose, conformational change; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* (A:1-105,A:275-299)
Probab=89.85 E-value=1.5 Score=23.53 Aligned_cols=105 Identities=11% Similarity=0.089 Sum_probs=69.6
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
|++||||-....+-++++ |.+++++.......... ..+..+.+...+.+++++......+...|+
T Consensus 2 ~~~iGIDiG~T~ira~l~---D~~G~ii~~~~~~t~~~------------~e~~~~~i~~~i~~~i~~~~~~~~~~~gI~ 66 (130)
T 2e2o_A 2 MIIVGVDAGGTKTKAVAY---DCEGNFIGEGSSGPGNY------------HNVGLTRAIENIKEAVKIAAKGEADVVGMG 66 (130)
T ss_dssp CCEEEEEECSSCEEEEEE---CTTSCEEEEEEESCCCH------------HHHCHHHHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CEEEEEEECHHHEEEEEE---CCCCCEEEEEEECCCCC------------CCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 099999965002799999---79998999999578997------------510499999999999997458987557883
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
Q ss_conf 406643012567799999998875148643330367765301322
Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLT 130 (363)
Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~ 130 (363)
+. |++- .-+...+.-+....+.|++--|-..+..++-.+.
T Consensus 67 ~~-gi~~----~~~~~l~~~l~~~~~~Pv~l~NDaraaalaE~l~ 106 (130)
T 2e2o_A 67 VA-GLDS----KFDWENFTPLASLIAPKVIIQHDGVIALFAETLR 106 (130)
T ss_dssp ET-TCCS----HHHHHHHHHHHTTSSSEEEEEEHHHHHHHHHHTC
T ss_pred CC-CCCC----CCHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCC
T ss_conf 24-5678----2046899999853588789971178998753037
No 47
>>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* (A:279-475)
Probab=89.56 E-value=1.5 Score=23.38 Aligned_cols=151 Identities=15% Similarity=0.086 Sum_probs=77.1
Q ss_pred EEEECCCEEEEEECCC---CCCEE----CCCCCC---------CCHHHHHHHHHHHCCCCCCH---------------HH
Q ss_conf 9970687479998375---64300----022336---------30023888898852887610---------------35
Q gi|254781038|r 140 LLVSGGHTQILLVRDV---AHYDR----LGTTID---------DALGECFDKIAKSLGLPYPG---------------GV 188 (363)
Q Consensus 140 LlvSGGhT~l~~~~~~---~~~~i----lg~T~D---------da~Ge~~DK~ar~Lgl~yPg---------------Gp 188 (363)
+.+|-|++..+.+... .+-+. ....++ -..|-+++.+.+.+.+.... ..
T Consensus 4 ~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (197)
T 3l0q_A 4 IALIGGTSTAHXAXSRSAHFISGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNY 83 (197)
T ss_dssp EEEECSSSEEEEEEESSCCCCTTSEEEEETSSSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHH
T ss_pred EEEECCCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
T ss_conf 48961674146773267623576113303677863034420033230599999860540246677665414428899999
Q ss_pred HHH----HHHHHCCCCCCCCCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 566----655405733345861110688-------754221024589999998511201210688999999999999999
Q gi|254781038|r 189 EIE----KAALMGDGKRFKFPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQA 257 (363)
Q Consensus 189 ~ie----~~A~~g~~~~~~~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~ 257 (363)
..+ .++.........+-.|...+. ...=+|.|+.... .+++..++..+ +++-+.-
T Consensus 84 ~~~~~~~~~~~~~~~~~g~~~~P~~~G~r~P~~~~~~~g~~~gl~~~t----------~~~~~~~~~rA----i~Egi~~ 149 (197)
T 3l0q_A 84 ILRQXAGEPENIAFLTNDIHXLPYFHGNRSPRANPNLTGIITGLKLST----------TPEDXALRYLA----TIQALAL 149 (197)
T ss_dssp HHHHHHSSGGGGGGGGTTCCEECCTTCBCSSSCBTTCCCEECSCCSCC----------SHHHHHHHHHH----HHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCC----------CHHHHHHHHHH----HHHHHHH
T ss_conf 999854324323656786078675467888776801454325888887----------45788999999----9999999
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 999999998762144552365413345879999999999986898899628
Q gi|254781038|r 258 RLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 258 k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
.++..++.++. .....+.+.++||.+.|..+++.+.++. |.+++.|.
T Consensus 150 ~~r~~~e~l~~-~g~~~~~i~v~GGgs~s~~~~Q~~Advl---g~pv~~~~ 196 (197)
T 3l0q_A 150 GTRHIIETXNQ-NGYNIDTXXASGGGTKNPIFVQEHANAT---GCAXLLPE 196 (197)
T ss_dssp HHHHHHHHHHT-TTCCCCEEEEESGGGGCHHHHHHHHHHH---CCEEEEES
T ss_pred HHHHHHHHHHH-CCCCCCEEEEECCHHHCHHHHHHHHHHH---CCCEEECC
T ss_conf 99999999996-2989787999895234899999999987---99259678
No 48
>>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} (A:173-332)
Probab=89.06 E-value=1.7 Score=23.14 Aligned_cols=57 Identities=16% Similarity=0.212 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH-HHHHHHHHHHHHCCCEEEEC
Q ss_conf 9999999999999998762144552365413345879-99999999998689889962
Q gi|254781038|r 251 VVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNH-FIRASLIDLCVLHGFRFVAP 307 (363)
Q Consensus 251 i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~-~LR~~l~~~~~~~~~~~~~P 307 (363)
+++..+.++.+.+-.+-.....++..+|+.||++-|+ .+|+++.+.++-.++.+..|
T Consensus 101 a~d~~~y~i~k~IG~~~~~~~g~vDaiVfTGGigens~~vr~~i~~~l~~lg~v~~~p 158 (160)
T 1saz_A 101 VYRAXAYQIAKWIGKXAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFP 158 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf 9999999999999999997299778899867021586999999997466403089977
No 49
>>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein structure initiative; 1.90A {Salmonella typhimurium} (A:1-128,A:313-327)
Probab=88.58 E-value=1.1 Score=24.33 Aligned_cols=108 Identities=14% Similarity=0.084 Sum_probs=70.6
Q ss_pred CCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88846887502602207788733888841898873113346212187145599999999699999999998389822453
Q gi|254781038|r 3 KIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 3 ~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363)
....+++|||=+-+...++++ |.+++++........... .+.+...+.+.+++...+..++.
T Consensus 21 ~~~~~~igvdig~t~i~~~l~---d~~G~il~~~~~~~~~~~---------------~~~~~~~i~~~i~~~~~~~~~i~ 82 (143)
T 2ap1_A 21 QSNAMYYGFDIGGTKIALGVF---DSTRRLQWEKRVPTPHTS---------------YSAFLDAVCELVEEADQRFGVKG 82 (143)
T ss_dssp --CCEEEEEEECSSEEEEEEE---ETTCCEEEEEEEECCCSC---------------HHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEEECCCEEEEEEE---ECCCCEEEEEEEECCCCC---------------HHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 589859999936466999999---099989999999799999---------------99999999999999888639972
Q ss_pred EEEECC-CC-----C--HHHHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf 687406-64-----3--01256--77999999988751486433303677653013
Q gi|254781038|r 83 SIAVTA-GP-----G--LMGGL--IVGLMTAKAISYVSHKPFYAINHLEGHILTAR 128 (363)
Q Consensus 83 ~Iavt~-gP-----G--~~~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~ 128 (363)
.|+++. || | ..+.. .-++...+.|...+++|++=.|..-|.--+++
T Consensus 83 ~Igia~pG~vd~~~g~i~~~~~~~w~~~~l~~~l~~~l~~PV~i~N~~~~~~~~~~ 138 (143)
T 2ap1_A 83 SVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDAGGMRGAAF 138 (143)
T ss_dssp EEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEETTHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 79999678543343334553110110142576776653465223438599999999
No 50
>>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} (A:1-122,A:247-267)
Probab=88.44 E-value=1.8 Score=22.86 Aligned_cols=115 Identities=15% Similarity=0.051 Sum_probs=75.6
Q ss_pred CCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88846887502602207788733888841898873113346212187145599999999699999999998389822453
Q gi|254781038|r 3 KIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 3 ~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363)
.+..++||||=+...+.++++ |.++++++............+ -.+...+..-+.+.+.+...+...+.
T Consensus 9 ~~~~y~iGIdIg~t~i~~~l~---D~~G~il~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~ 76 (143)
T 1woq_A 9 HKNAPLIGIDIGGTGIKGGIV---DLKKGKLLGERFRVPTPQPAT---------PESVAEAVALVVAELSARPEAPAAGS 76 (143)
T ss_dssp --CCCEEEEEECSSEEEEEEE---ETTTTEEEEEEEEEECCSSCC---------HHHHHHHHHHHHHHHHTSTTCCCTTC
T ss_pred CCCCCEEEEEECCCEEEEEEE---ECCCCEEEEEEEEECCCCCCC---------HHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 899989999977655999999---899998999999967899999---------99999999999999865115676440
Q ss_pred EEEECCCC------CHHHH----HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
Q ss_conf 68740664------30125----6779999999887514864333036776530132
Q gi|254781038|r 83 SIAVTAGP------GLMGG----LIVGLMTAKAISYVSHKPFYAINHLEGHILTARL 129 (363)
Q Consensus 83 ~Iavt~gP------G~~~~----L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l 129 (363)
.++++..- |.... -.-+....+.|...+++|++=-|.-|+-+.-+.+
T Consensus 77 ~igI~~~G~v~~~~g~v~~~~~~~w~~~~l~~~L~~~~g~PV~i~N~~~~~~~~~~~ 133 (143)
T 1woq_A 77 PVGVTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINRNEAGIVGAAI 133 (143)
T ss_dssp CEEEEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEESTTHHHHHHHH
T ss_pred EEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCHHCCCCCCHHHHHHHH
T ss_conf 156402322222068886313555431116889987631020116589799999999
No 51
>>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} (A:1-172,A:333-381)
Probab=88.42 E-value=1.8 Score=22.85 Aligned_cols=75 Identities=11% Similarity=0.265 Sum_probs=49.0
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
|-||.|---.-.|=+|++++ +..+..+.+.-..+.-.+|..|.--.-.| ..+|.+.|++.++++.++|+|+
T Consensus 2 ~kILvINPGSTSTKIAvfe~---e~~v~~~~i~H~~eEL~~f~~i~dQ~~~R------~~~I~~~L~e~gi~~~~ldAVV 72 (221)
T 1saz_A 2 FRILTINPGSTSTKLSIFED---ERXVKXQNFSHSPDELGRFQKILDQLEFR------EKIARQFVEETGYSLSSFSAFV 72 (221)
T ss_dssp CEEEEEEECSSEEEEEEEET---TEEEEEEEEECCHHHHHTCSSGGGGHHHH------HHHHHHHHHTTTCCGGGCSEEE
T ss_pred CEEEEECCCCHHHEEEEEEC---CCCEEECEEEECCHHHCCCCCCHHHHHHH------HHHHHHHHHHCCCCCCCCCEEE
T ss_conf 74999857817562378938---86123442143210104445301058899------9999999987699835147799
Q ss_pred ECCC
Q ss_conf 4066
Q gi|254781038|r 86 VTAG 89 (363)
Q Consensus 86 vt~g 89 (363)
---|
T Consensus 73 gRGG 76 (221)
T 1saz_A 73 SRGG 76 (221)
T ss_dssp EECC
T ss_pred EECC
T ss_conf 8089
No 52
>>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding protein, helix-turn-helix, phosphotransferase system, metalloprotein; 2.70A {Escherichia coli} (A:195-381)
Probab=87.91 E-value=1.8 Score=22.95 Aligned_cols=29 Identities=3% Similarity=0.108 Sum_probs=23.2
Q ss_pred CCCEEEEEHHHHHH-HHHHHHHHHHHHHCC
Q ss_conf 55236541334587-999999999998689
Q gi|254781038|r 273 KQAVLVVSGGVASN-HFIRASLIDLCVLHG 301 (363)
Q Consensus 273 ~~~~lvv~GGVaaN-~~LR~~l~~~~~~~~ 301 (363)
++..+|++||++.+ ..+.+.+++..+++-
T Consensus 140 ~p~~IvlgG~~~~~~~~~~~~l~~~~~~~~ 169 (187)
T 1z6r_A 140 NPQKILIGSPLSKAADILFPVISDSIRQQA 169 (187)
T ss_dssp CCSEEEEESGGGGGHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECHHHHCHHHHHHHHHHHHHHHC
T ss_conf 989899979577274889999999999851
No 53
>>3gbt_A Gluconate kinase; LBA0354, FGGY kinase family, carbohydrate metabolic process, transferase, structural genomics, PSI-2; 2.40A {Lactobacillus acidophilus ncfm} (A:1-237)
Probab=86.39 E-value=2.4 Score=22.07 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=44.6
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
.++|||||-...-+-++++ |.++++++...........+-|.+-.. ...-.+.+...+.++. +....+|.+|
T Consensus 3 m~~~lgID~GTts~ka~l~---d~~g~~~~~~~~~~~~~~~~~g~~e~d--~~~~~~~~~~~~~~~~---~~~~~~I~~I 74 (237)
T 3gbt_A 3 LKYIIGXDVGTTATKGVLY---DINGKAVASVSKGYPLIQTKVGQAEED--PKLIFDAVQEIIFDLT---QKIDGKIAAI 74 (237)
T ss_dssp CEEEEEEEECSSEEEEEEE---ETTSCEEEEEEEECCCBCSSTTCCEEC--HHHHHHHHHHHHHHHH---HTCSSEEEEE
T ss_pred CCEEEEEECCCCCEEEEEE---ECCCCEEEEEEEECCCCCCCCCCEEEC--HHHHHHHHHHHHHHHH---HHCCCCCEEE
T ss_conf 7789999751103100068---388989999998478316999971479--9999999999999999---6388871599
Q ss_pred EECC
Q ss_conf 7406
Q gi|254781038|r 85 AVTA 88 (363)
Q Consensus 85 avt~ 88 (363)
+++.
T Consensus 75 ~is~ 78 (237)
T 3gbt_A 75 SWSS 78 (237)
T ss_dssp EEEE
T ss_pred EECC
T ss_conf 9847
No 54
>>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A (A:1-120,A:276-302)
Probab=85.05 E-value=2.5 Score=21.92 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=75.1
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
...+||||=.-+.+.++++ |.+++++......... .+.+...+.+.+++...+...+..|
T Consensus 2 ~~~~iGIdIg~t~i~~~l~---Dl~G~ii~~~~~p~~~-----------------~~~~~~~I~~~i~~~~~~~~~i~gi 61 (147)
T 3epq_A 2 NAXLGGIEAGGTXFVCAVG---REDGTIIDRIEFPTXX-----------------PDETIEXVIQYFSQFSLQAIGIGSF 61 (147)
T ss_dssp -CCEEEEEECSSEEEEEEE---CTTSCEEEEEEEECCC-----------------HHHHHHHHHHHHTTSCCSEEEEEEC
T ss_pred CCEEEEEEECCCEEEEEEE---CCCCCEEEEEEECCCC-----------------HHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 9669999977777999999---6999599999965899-----------------7999999999998714765588101
Q ss_pred EECCCC------CH--H-HHH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 740664------30--1-256-7799999998875148643330367765301
Q gi|254781038|r 85 AVTAGP------GL--M-GGL-IVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 85 avt~gP------G~--~-~~L-~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
++..-. |. . +-+ ..+....+.|...+++|++=.|...+-.+.=
T Consensus 62 gi~~pG~vd~~~g~i~~~~~~~w~~~~L~~~L~~~~~~PV~ieNDanaaalaE 114 (147)
T 3epq_A 62 GPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEXXIPVGFSTDVNAAALGE 114 (147)
T ss_dssp SSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHH
T ss_pred EEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCHHHHHHHH
T ss_conf 40135666411116925898663788549989753564579964578889999
No 55
>>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} (A:1-241)
Probab=82.80 E-value=3.4 Score=21.02 Aligned_cols=77 Identities=12% Similarity=0.085 Sum_probs=48.2
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
+++||||-....+-++++ |.++++++.........-..-|..... ..+=.+.+...+++++.+.+....++-+|.
T Consensus 2 ~~~lgiDiGTts~Ka~l~---d~~g~~i~~~~~~~~~~~~~~~~~e~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 76 (241)
T 2dpn_A 2 AFLLALDQGTTSSRAILF---TLEGRPVAVAKREFRQLYPKPGWVEHD--PLEIWETTLWAAREVLRRAGAEAGEVLALG 76 (241)
T ss_dssp -CEEEEEECSSEEEEEEE---CTTSCEEEEEEEECCEECSSTTCCEEC--HHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred CEEEEEECCCCCEEEEEE---ECCCCEEEEEEEECCEECCCCCCEEEC--HHHHHHHHHHHHHHHHHHCCCCHHCEEEEE
T ss_conf 689999841113110178---088989999997467045899828999--999999999999999997499842057999
Q ss_pred EC
Q ss_conf 40
Q gi|254781038|r 86 VT 87 (363)
Q Consensus 86 vt 87 (363)
++
T Consensus 77 ~~ 78 (241)
T 2dpn_A 77 IT 78 (241)
T ss_dssp EE
T ss_pred EE
T ss_conf 98
No 56
>>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp} (A:159-370)
Probab=82.17 E-value=2.1 Score=22.38 Aligned_cols=53 Identities=25% Similarity=0.402 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH-HHHHHHHHHHHHCCCEE
Q ss_conf 9999999999999998762144552365413345879-99999999998689889
Q gi|254781038|r 251 VVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNH-FIRASLIDLCVLHGFRF 304 (363)
Q Consensus 251 i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~-~LR~~l~~~~~~~~~~~ 304 (363)
+++..+.++.+.+-.+-. .-.++..+|+.||++-|. .+|+++.+.++-.|+.+
T Consensus 134 a~d~~~y~i~k~Iga~~a-~LggiDaiVFTGGige~s~~vr~~i~~~l~~lGi~i 187 (212)
T 3khy_A 134 AIEIFSHRVAKFVASYXI-YFNKLDALVFTGGIGENAANIRKNIISKLANLGFXI 187 (212)
T ss_dssp HHHHHHHHHHHHHHHHGG-GCSSCCEEEEEHHHHHHCHHHHHHHHHHTGGGTCCB
T ss_pred HHHHHHHHHHHHHHHHHH-HHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 999999999999999999-738999999868203477999999985345519463
No 57
>>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} (A:1-131,A:286-310)
Probab=81.83 E-value=3.7 Score=20.78 Aligned_cols=111 Identities=14% Similarity=0.109 Sum_probs=76.2
Q ss_pred CCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 88884688750260220778873388884189887311334621218714559999999969999999999838982245
Q gi|254781038|r 2 SKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDM 81 (363)
Q Consensus 2 ~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~i 81 (363)
..+..+++|||-.-+.+.++++ |.+++++............ ..-.+.+...+++.+++++.++..|
T Consensus 3 Np~~~~~iGVdig~t~i~~~l~---dl~G~il~~~~~~~~~~~~-----------~~~l~~i~~~i~~~~~~~~~~i~gI 68 (156)
T 3htv_A 3 QKQHNVVAGVDXGATHIRFCLR---TAEGETLHCEKKRTAEVIA-----------PGLVSGIGEXIDEQLRRFNARCHGL 68 (156)
T ss_dssp -CCEEEEEEEEECSSEEEEEEE---ETTSCEEEEEEEEHHHHHT-----------TCHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCCCEEEEEEECCCEEEEEEE---CCCCCEEEEEEECCCCCCH-----------HHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 8778899999977656999999---2999899999970888788-----------9999999999999998659983179
Q ss_pred CEEEECCCCCHH----------HHH----HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
Q ss_conf 368740664301----------256----7799999998875148643330367765301322
Q gi|254781038|r 82 DSIAVTAGPGLM----------GGL----IVGLMTAKAISYVSHKPFYAINHLEGHILTARLT 130 (363)
Q Consensus 82 d~Iavt~gPG~~----------~~L----~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~ 130 (363)
+++ .||.+ +-+ .-+...++.|...+++|++=.|...+-+++-.+.
T Consensus 69 ---gia-~pG~vd~~~g~v~~~~~~~~~~w~~~~l~~~L~~~~~~pV~veNDanaaalaE~~~ 127 (156)
T 3htv_A 69 ---VXG-FPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVE 127 (156)
T ss_dssp ---EEE-ESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHH
T ss_pred ---EEE-ECCCEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHH
T ss_conf ---997-16417548971984688875322376679999998798878405255555677763
No 58
>>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain DSM 12444, SGX, transferase, structural genomics; 2.50A {Novosphingobium aromaticivorans DSM12444} (A:247-482)
Probab=81.06 E-value=2.5 Score=21.90 Aligned_cols=159 Identities=11% Similarity=-0.038 Sum_probs=80.6
Q ss_pred EEEEECCCEEEEEECCCC---CCEEC--C-------------CCCCCCHHHHHHHHHHHCCCCCCH-HHHHHHHHHHCCC
Q ss_conf 999706874799983756---43000--2-------------233630023888898852887610-3556665540573
Q gi|254781038|r 139 VLLVSGGHTQILLVRDVA---HYDRL--G-------------TTIDDALGECFDKIAKSLGLPYPG-GVEIEKAALMGDG 199 (363)
Q Consensus 139 ~LlvSGGhT~l~~~~~~~---~~~il--g-------------~T~Dda~Ge~~DK~ar~Lgl~yPg-Gp~ie~~A~~g~~ 199 (363)
-+.+|=|++.++.+.... ..+.. + ...--..|-+++-+-+.++.+.+. -..+...+....+
T Consensus 6 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (236)
T 3h6e_A 6 ATVLSTGTWFIAXRLPATPVDTATLPEARDCLVNVDVHGRPVPSARFXGGREIETLIEIDTRRVDIKPDQPALLAAVPEV 85 (236)
T ss_dssp EEEEECSSSEEEEEECSSCCCGGGCCGGGTEEEEECTTSCEEEEEEECHHHHHHHHHCSGGGCTTCGGGHHHHHHTHHHH
T ss_pred EEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
T ss_conf 59991694899977889730034556764358821788630688898735999999997334226663489987443654
Q ss_pred --CCCCCCCHHCCC-----CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf --334586111068-----8754221024589999998511201210688999999999999999999999998762144
Q gi|254781038|r 200 --KRFKFPCPLVQG-----TLCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPH 272 (363)
Q Consensus 200 --~~~~~P~p~~~~-----~~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~ 272 (363)
..+.| .|...+ .+..-+|.|+...-.+ +..+ +.+.+.-.++..++.. .
T Consensus 86 ~~~g~~~-~p~~~G~~~p~~~~~g~~~gl~~~~~~---------------~~rA----~~Egia~~~~~~~~~~-----~ 140 (236)
T 3h6e_A 86 LRHGRXI-LPTLXRGFGPYPHGRFAWINRPEDWFE---------------RRAA----ACLYAALVADTALDLI-----G 140 (236)
T ss_dssp HHTTCEE-ESCSSTTCSSCTTCCCEEESCCSSHHH---------------HHHH----HHHHHHHHHHHHHHHT-----T
T ss_pred CCCCEEE-CCCCCCCCCCCCCCCCCCCCCCCCHHH---------------HHHH----HHHHHHHHHHHHHHHH-----C
T ss_conf 5577066-756587888786752402489998899---------------9999----9999999999999972-----7
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCH-HHCCCHHHHHHHHHH
Q ss_conf 5523654133458799999999999868988996287-887725899999999
Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPA-RLCTDNAVMIAWAAL 324 (363)
Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~-~~ctDNAaMIA~ag~ 324 (363)
....+.++||.+.|..+++.+.+.+.. -.+..+.. +-+.=-|||+|..+.
T Consensus 141 ~~~~i~v~GG~s~s~~~~qi~Advlg~--~~v~~~~~~ea~a~GaA~~A~~a~ 191 (236)
T 3h6e_A 141 STGRILVEGRFAEADVFVRALASLRPD--CAVYTANAHNDVSFGALRLIDPGL 191 (236)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHSTT--SEEEEESSCCCTTGGGHHHHCTTC
T ss_pred CCCEEEEECCCHHCHHHHHHHHHHCCC--CEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 998699988862189999999987299--879907976379999999986026
No 59
>>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} (A:1-76,A:369-404,A:592-610)
Probab=80.82 E-value=4 Score=20.54 Aligned_cols=92 Identities=18% Similarity=0.207 Sum_probs=60.2
Q ss_pred CEEEEEECCCHHHEEEEEECCC-CCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 4688750260220778873388-884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKD-SHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~-~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
++|-|||-=...|.+.+.+.+. .+-.+..--+. ..++ .-|+.|. ..-..+-++++|++++++.+|+|.|
T Consensus 2 kiIaGIDiGaSat~ViLas~~~a~el~i~~~a~i---~s~G-ikG~~pn------i~G~~~AI~kALekAGls~~DIdlI 71 (131)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEAGALTITHSALA---ETTG-IKGTLRN------VFGIQEALALVARGAGIAVSDISLI 71 (131)
T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEE---ECCS-STTSTTH------HHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CEEEEEECCCCCEEEEEEEECCCCCEEEEECCCC---CCCC-CCCCHHH------HHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 5698985077521278899638982677524646---6677-5674878------9999999999999829987772333
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 7406643012567799999998875148643
Q gi|254781038|r 85 AVTAGPGLMGGLIVGLMTAKAISYVSHKPFY 115 (363)
Q Consensus 85 avt~gPG~~~~L~vG~~~Ak~la~~~~~Pli 115 (363)
-+.--|= ...|+-|...+++++.
T Consensus 72 eINEA~m--------~~ia~~~~~~~~~~v~ 94 (131)
T 2d0o_A 72 RINEAQM--------AMIAREIEQKLNIDVQ 94 (131)
T ss_dssp EEEECCH--------HHHHHHHHHHHCCEEE
T ss_pred HHCCCEE--------EHHHHHHHHHHCCHHH
T ss_conf 3214720--------0468899997285144
No 60
>>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A (A:1-231)
Probab=80.44 E-value=4.1 Score=20.46 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=45.0
Q ss_pred EEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 68875026022077887338888418988731133462121871455999999996999999999983898224536874
Q gi|254781038|r 7 TVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAV 86 (363)
Q Consensus 7 ~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iav 86 (363)
++||||-..--+-++++ |.++++++...........+-|..... ...=.+.+...+++++++ ....+|.+|++
T Consensus 1 ~~lgiDiGTts~Ka~l~---d~~g~vv~~~~~~~~~~~~~~g~~e~d--~~~~~~~~~~~~~~~~~~--~~~~~i~~I~~ 73 (231)
T 2itm_A 1 MYIGIDLGTSGVKVILL---NEQGEVVAAQTEKLTVSRPHPLWSEQD--PEQWWQATDRAMKALGDQ--HSLQDVKALGI 73 (231)
T ss_dssp CEEEEEECSSEEEEEEE---CTTSCEEEEEEEECCCBCSSTTCCEEC--HHHHHHHHHHHHHHHHHH--SCCTTCCEEEE
T ss_pred CEEEEEECCCCEEEEEE---ECCCCEEEEEEEECCEECCCCCEEEEC--HHHHHHHHHHHHHHHHHH--CCCCCCEEEEE
T ss_conf 98999962225221278---088989999998445145899838989--999999999999999976--69557479999
Q ss_pred CCC
Q ss_conf 066
Q gi|254781038|r 87 TAG 89 (363)
Q Consensus 87 t~g 89 (363)
|.-
T Consensus 74 s~~ 76 (231)
T 2itm_A 74 AGQ 76 (231)
T ss_dssp EEC
T ss_pred ECC
T ss_conf 766
No 61
>>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase, transferase; 1.60A {Burkholderia pseudomallei 1710B} PDB: 3gwe_A (A:1-41,A:77-203)
Probab=79.81 E-value=2.1 Score=22.39 Aligned_cols=63 Identities=8% Similarity=-0.011 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 996999999999983898224536874066430125677999999988751486433303677
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEG 122 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~a 122 (363)
.+.....++++|++++++.+|||.|.++.-.+....-..+.-.+..+....++|.+.++.--+
T Consensus 46 ~~LA~~A~~~aL~~agi~p~dID~iv~gs~t~~~~~~~~a~~ia~~lGl~~~~~~~~i~~aCa 108 (168)
T 3gwa_A 46 ADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCS 108 (168)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHH
T ss_conf 999999999999975979120675898410256666336677776530356507766121334
No 62
>>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} (A:217-402)
Probab=79.36 E-value=4.4 Score=20.23 Aligned_cols=30 Identities=7% Similarity=0.175 Sum_probs=23.6
Q ss_pred CCCEEEEEHHHHH-HHHHHHHHHHHHHHCCC
Q ss_conf 5523654133458-79999999999986898
Q gi|254781038|r 273 KQAVLVVSGGVAS-NHFIRASLIDLCVLHGF 302 (363)
Q Consensus 273 ~~~~lvv~GGVaa-N~~LR~~l~~~~~~~~~ 302 (363)
++..+|++||++. ...+.+.+++..+++.+
T Consensus 141 ~p~~IvlgG~~~~~~~~~~~~l~~~~~~~~~ 171 (186)
T 1z05_A 141 NPEKILIGGVINQAKSILYPSIEQCIREQSL 171 (186)
T ss_dssp CCSEEEEESGGGGGHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECHHHHCHHHHHHHHHHHHHHHCC
T ss_conf 9798999792573868899999999998504
No 63
>>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} (A:174-393)
Probab=78.13 E-value=4.8 Score=19.98 Aligned_cols=145 Identities=16% Similarity=0.149 Sum_probs=67.3
Q ss_pred CCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCC-------CCHHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 9843999706874799983756430002233630023888898852887-------610355666554057333458611
Q gi|254781038|r 135 FPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLP-------YPGGVEIEKAALMGDGKRFKFPCP 207 (363)
Q Consensus 135 ~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~-------yPgGp~ie~~A~~g~~~~~~~P~p 207 (363)
.-.++.|+=+|-|.-.+-+. ..+ -+|+...+.| |+. .|.|..+ .++++..-..-.+-.-
T Consensus 37 ~~lIv~HLG~G~Si~Ai~~G-rsi---DtsmG~tple---------G~~m~tRsG~ldp~~l~-~l~~~~~~s~~e~~~~ 102 (220)
T 2e1z_A 37 SGLIVAHLGNGASICAVRNG-QSV---DTSMGMTPLE---------GLMMGTRSGDVDFGAMA-WIAKETGQTLSDLERV 102 (220)
T ss_dssp CEEEEEEESSSEEEEEEETT-EEE---EESCCSSTTS---------SSCCSSCCCSCCHHHHH-HHHHHHCCCHHHHHHH
T ss_pred CCEEEEEECCCEEEEEEECC-EEE---ECCCCCCCCC---------CCCCCCCCCCCCHHHHH-HHHHHCCCCHHHHHHH
T ss_conf 76899995799068999789-247---6377766557---------88678989998818999-9998709999999998
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH-
Q ss_conf 1068875422102458999999851120121068899999999999999999999999876214455236541334587-
Q gi|254781038|r 208 LVQGTLCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASN- 286 (363)
Q Consensus 208 ~~~~~~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN- 286 (363)
+.++.++ ++.||+-+.++...+..+..+ +.+.+| ++..+.++.+.+-.+- ..-.++..+|+.||++-|
T Consensus 103 Ln~~sGL-~glsG~s~D~R~i~~~~~~gd--~~A~la-------~d~~~y~i~k~Iga~~-~~LggiDaIVFTGGigen~ 171 (220)
T 2e1z_A 103 VNKESGL-LGISGLSSDLRVLEKAWHEGH--ERARLA-------IKTFVHRIARHIAGHA-ASLHRLDGIIFTGGIGENS 171 (220)
T ss_dssp HHHSCHH-HHHHSSCSCHHHHHHHHHTTC--HHHHHH-------HHHHHHHHHHHHHHHH-TTCSSCCEEEEEHHHHHHC
T ss_pred HHCCCCC-EEEECCCCCHHHHHHHHHCCC--HHHHHH-------HHHHHHHHHHHHHHHH-HHHCCCCEEEECCCCCCCC
T ss_conf 6305673-787478653999999987789--999999-------9999999999999999-9877999999868303587
Q ss_pred HHHHHHHHHHHHHCCCEE
Q ss_conf 999999999998689889
Q gi|254781038|r 287 HFIRASLIDLCVLHGFRF 304 (363)
Q Consensus 287 ~~LR~~l~~~~~~~~~~~ 304 (363)
..+|+++.+.++-.++.+
T Consensus 172 ~~vR~~i~~~l~~lgi~i 189 (220)
T 2e1z_A 172 VLIRQLVIEHLGVLGLTL 189 (220)
T ss_dssp HHHHHHHHHTTGGGTCCB
T ss_pred HHHHHHHHHHHHHCCEEE
T ss_conf 999999985356518057
No 64
>>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics, JCSG; 2.46A {Thermotoga maritima} (A:212-357)
Probab=77.96 E-value=3.4 Score=21.02 Aligned_cols=32 Identities=9% Similarity=-0.070 Sum_probs=25.9
Q ss_pred CCCEEEEEHHHHH-HHHHHHHHHHHHHHCCCEE
Q ss_conf 5523654133458-7999999999998689889
Q gi|254781038|r 273 KQAVLVVSGGVAS-NHFIRASLIDLCVLHGFRF 304 (363)
Q Consensus 273 ~~~~lvv~GGVaa-N~~LR~~l~~~~~~~~~~~ 304 (363)
++..+|++||++. +..+.+.+++..+++....
T Consensus 103 ~p~~IvlgG~i~~~~~~~~~~l~~~~~~~~~~~ 135 (146)
T 2hoe_A 103 GISKIVIGGFFKELGENFLKKIKIEVETHLLYK 135 (146)
T ss_dssp CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSS
T ss_pred CCCEEEEECHHHHCHHHHHHHHHHHHHHHCCCC
T ss_conf 989899909358675999999999999726777
No 65
>>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; brucellosis, niaid, seattle structural genomics center for infectious disease, ssgcid; 1.75A {Brucella melitensis} PDB: 3e60_A (A:)
Probab=77.65 E-value=4.9 Score=19.89 Aligned_cols=32 Identities=13% Similarity=0.014 Sum_probs=19.1
Q ss_pred CCCCHHHHH--HHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 714559999--99996999999999983898224
Q gi|254781038|r 49 GVVPEVAAR--AHVDVLDILIKQTLLRANMQISD 80 (363)
Q Consensus 49 Gv~P~~A~~--~H~~~l~~li~~~l~~a~~~~~~ 80 (363)
++.|..+.. .....+.....++|+.+++...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~a~~~Al~~Ag~~~~~ 108 (428)
T 3kzu_A 75 HMDPKEQRKVDPFIVYAVGAADQALDDAGWHPEN 108 (428)
T ss_dssp TSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCS
T ss_pred CCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 6899999857999999999999999975999543
No 66
>>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} (A:14-177)
Probab=76.72 E-value=4.5 Score=20.16 Aligned_cols=65 Identities=14% Similarity=0.106 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
Q ss_conf 999999969999999999838982245368740664301256779999999887514864333036776530
Q gi|254781038|r 55 AARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363)
Q Consensus 55 A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363)
......+.....++++|++++++.+|||.+-+...-|. -..+..++..++.|.+-|+-..+=-++
T Consensus 38 ~~~~~~~L~~~a~~~aL~~agi~~~~i~~~~~g~~~~~-------~~~~~~~~~~lg~p~~~v~~aCssg~~ 102 (164)
T 3lma_A 38 WEXAERKLXEDAVQSALSKQNLKKEDIDIFLAGDLLNQ-------NVTANYVARHLKIPFLCLFGACSTSXE 102 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS-------STTHHHHHHHHCCCEEEBCCSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCC-------HHHHHHHHHHCCCCEEEECCCCHHHHH
T ss_conf 88999999999999999981989899889999970496-------789999999739988630573267999
No 67
>>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, cytoplasm, thiolase fold; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... (A:)
Probab=75.95 E-value=3.9 Score=20.58 Aligned_cols=63 Identities=13% Similarity=0.099 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 999699999999998389822453687406643012567799999998875148643330367
Q gi|254781038|r 59 HVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLE 121 (363)
Q Consensus 59 H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~ 121 (363)
-.+.....++++|..++++.+|||.+.++.-+.....-..+-..+...-....+|.+-|+..-
T Consensus 27 ~~~La~~a~~~Al~dagl~~~~ID~iv~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~v~~~c 89 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLX 89 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGG
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCC
T ss_conf 999999999999987095989929999996277665556999999977999755436642565
No 68
>>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta- alpha-beta-alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* (A:)
Probab=75.88 E-value=3.5 Score=20.92 Aligned_cols=72 Identities=14% Similarity=0.065 Sum_probs=43.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC-HHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 12187145599999999699999999998389822453687406643-01256779999999887514864333036
Q gi|254781038|r 45 GHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPG-LMGGLIVGLMTAKAISYVSHKPFYAINHL 120 (363)
Q Consensus 45 ~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG-~~~~L~vG~~~Ak~la~~~~~Pli~VnH~ 120 (363)
++++|-.|+ +.-.+.....++++|..++++..|||.|.++..++ ..+....+...+..+.. ..+|...|+..
T Consensus 21 ~r~~~~~~~---~s~~~L~~eA~~~Al~dagl~~~dId~vv~g~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~ 93 (395)
T 2ib8_A 21 GSFLGSLSL---LPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLP-ISTPCTTINKV 93 (395)
T ss_dssp EETTSTTTT---SCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCC-TTCCEEEEECG
T ss_pred CCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCC-CCCCEEEEECC
T ss_conf 568987578---99999999999999987293989928999994684342558999999851457-78863676235
No 69
>>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase, transferase; 1.60A {Burkholderia pseudomallei 1710B} PDB: 3gwe_A (A:204-365)
Probab=75.73 E-value=5.5 Score=19.54 Aligned_cols=101 Identities=8% Similarity=-0.049 Sum_probs=56.8
Q ss_pred HEEEEEECCCCCCEEEEEEEECCCCCC----CCCCCC-C-C-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
Q ss_conf 077887338888418988731133462----121871-4-5-59999999969999999999838982245368740664
Q gi|254781038|r 18 TAVAVVRRKDSHGEILAEAVLSQIDQH----GHYGGV-V-P-EVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGP 90 (363)
Q Consensus 18 tsvaiv~~~~~~~~il~~~~~sq~~~~----~~~GGv-~-P-~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gP 90 (363)
.++.|+...+....++.....+....+ ...+|. . . ....+.-......++++++++++++.+|||.+....+-
T Consensus 13 AaA~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~~~hq~~ 92 (162)
T 3gwa_A 13 RGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEPRENIDCFVLHQAN 92 (162)
T ss_dssp GGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCC
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCC
T ss_conf 77662686167646876543211233444653455317980267645444321010110022048755433388724677
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHCC
Q ss_conf 301256779999999887514864333---0367765301
Q gi|254781038|r 91 GLMGGLIVGLMTAKAISYVSHKPFYAI---NHLEGHILTA 127 (363)
Q Consensus 91 G~~~~L~vG~~~Ak~la~~~~~Pli~V---nH~~aH~~~~ 127 (363)
. .+...++..+++|.=.+ -+--||..++
T Consensus 93 ~---------~~~~~~~~~lg~~~e~~~~~~~~~Gn~~sa 123 (162)
T 3gwa_A 93 R---------FMLDALRKKMKIPEHKFPVLMEHCGNTVSS 123 (162)
T ss_dssp H---------HHHHHHHHHHTCCGGGSCCCCTTTCBCGGG
T ss_pred H---------HHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
T ss_conf 9---------999999998196989967778620763888
No 70
>>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} (A:1-119,A:275-289)
Probab=74.55 E-value=5.9 Score=19.34 Aligned_cols=101 Identities=16% Similarity=0.203 Sum_probs=65.4
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
|+++|||=+-+...++++ |.+++++........... ..+.+...+.+.+ +....++.+|+
T Consensus 1 myvigidig~~~i~~~l~---dl~g~ii~~~~~~~~~~~--------------~~~~i~~~~~~~~---~~~~~~i~gIg 60 (134)
T 2aa4_A 1 MTTLAIDIGGTKLAAALI---GADGQIRDRRELPTPASQ--------------TPEALRDALSALV---SPLQAHAQRVA 60 (134)
T ss_dssp CCEEEEEECSSEEEEEEE---CTTCCEEEEEEEECCSSC--------------CHHHHHHHHHHHH---TTTGGGCSEEE
T ss_pred CCEEEEEECHHHEEEEEE---CCCCCEEEEEEEECCCCC--------------CHHHHHHHHHHHH---HHHHHHCCCEE
T ss_conf 979999988104899999---799979999999789888--------------9999999999999---99876437414
Q ss_pred ECC-CC-----C---HHHHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
Q ss_conf 406-64-----3---01256--779999999887514864333036776530
Q gi|254781038|r 86 VTA-GP-----G---LMGGL--IVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363)
Q Consensus 86 vt~-gP-----G---~~~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363)
++. || | ..+.+ .-+....+-|...+++|++=.|-..+=.+.
T Consensus 61 ia~pG~v~~~~g~v~~~~~~~~w~~v~l~~~l~~~~~~Pv~i~NDan~aala 112 (134)
T 2aa4_A 61 IASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWA 112 (134)
T ss_dssp EEESSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHH
T ss_pred EEEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 6544555410110010135553345524555556541451123015565541
No 71
>>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genomics consortium, SGC, transferase; 2.55A {Homo sapiens} (A:)
Probab=73.25 E-value=6.3 Score=19.13 Aligned_cols=63 Identities=14% Similarity=0.158 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 996999999999983898224536874066430125677999999988751486433303677
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEG 122 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~a 122 (363)
.+.....++++|++++++.+|||.+.+....+....-......+..+...-.+|.+-|+---+
T Consensus 56 ~~La~~A~~~Al~daGi~~~dID~ii~g~~~~~~~~~~~a~~~~~~~g~~~~~~~~~v~~~ca 118 (418)
T 2iik_A 56 DELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCS 118 (418)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGG
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC
T ss_conf 999999999999874989899899999977866646579999999779997776688734676
No 72
>>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} (A:)
Probab=72.81 E-value=6.5 Score=19.06 Aligned_cols=64 Identities=14% Similarity=0.104 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEE-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 9996999999999983898224536874-066430125677999999988751486433303677
Q gi|254781038|r 59 HVDVLDILIKQTLLRANMQISDMDSIAV-TAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEG 122 (363)
Q Consensus 59 H~~~l~~li~~~l~~a~~~~~~id~Iav-t~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~a 122 (363)
-.+.....++++|+.++++..|||.|.+ +..|+...+-...-..+...--..++|.+-|+..-+
T Consensus 26 ~~~L~~~A~~~Al~dAgl~~~dID~ii~g~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~v~~~ca 90 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCG 90 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC
T ss_conf 99999999999999809497993989999467655441349999999669697542577632553
No 73
>>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} (A:204-415)
Probab=70.80 E-value=4.3 Score=20.30 Aligned_cols=10 Identities=10% Similarity=0.149 Sum_probs=4.0
Q ss_pred CCCHHHHHHH
Q ss_conf 7725899999
Q gi|254781038|r 312 CTDNAVMIAW 321 (363)
Q Consensus 312 ctDNAaMIA~ 321 (363)
||--+|++-|
T Consensus 188 STgGGA~L~~ 197 (212)
T 16pk_A 188 STGGGASLEL 197 (212)
T ss_dssp CSCHHHHHHH
T ss_pred ECCHHHHHHH
T ss_conf 7778999999
No 74
>>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis V583} (A:132-307)
Probab=70.19 E-value=7.4 Score=18.67 Aligned_cols=53 Identities=17% Similarity=0.160 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH-HHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999999999987621445523654133458-79999999999986898
Q gi|254781038|r 244 CASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVAS-NHFIRASLIDLCVLHGF 302 (363)
Q Consensus 244 aasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaa-N~~LR~~l~~~~~~~~~ 302 (363)
|...-+...+.|..-+...+..+ ++..+|++||++. +..+.+.+++..+++..
T Consensus 108 a~~~~~~~~~~la~~i~n~~~~l------~Pe~IvlgG~i~~~~~~~~~~l~~~~~~~~~ 161 (176)
T 2qm1_A 108 ALXVVDRVCFYLGLATGNLGNTL------NPDSVVIGGGVSAAGEFLRSRVEKYFQEFTF 161 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------CCSEEEEEESGGGGTHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC------CCCEEEEECHHHHCHHHHHHHHHHHHHHHCC
T ss_conf 89999987766889999999983------9898999695770718899999999997225
No 75
>>1im4_A DBH; DNA polymerase PALM, thumb, fingers, helix-hairpin-helix, fidelity, processivity, transferase; 2.30A {Sulfolobus solfataricus} (A:1-15,A:83-174)
Probab=70.05 E-value=2.4 Score=22.03 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=27.2
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 36541334587999999999998689889962
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFRFVAP 307 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P 307 (363)
.+-++-||+.|+.|-+.-.++++..|..++.|
T Consensus 76 glt~SvGIa~NklLAKiAs~~aKPnG~~vi~P 107 (107)
T 1im4_A 76 KITVTVGVAPNKILAKIIADKSKPNGLGVIRP 107 (107)
T ss_dssp CCCEEEEEESSHHHHHHHHHHTCSSCEEECCG
T ss_pred CCCEEECCCCCHHHHHHHHHHHHHCCEEEECC
T ss_conf 87668632684899999998623288589441
No 76
>>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} (A:183-398)
Probab=68.58 E-value=4.7 Score=20.01 Aligned_cols=23 Identities=9% Similarity=-0.029 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 99999988751486433303677
Q gi|254781038|r 100 LMTAKAISYVSHKPFYAINHLEG 122 (363)
Q Consensus 100 ~~~Ak~la~~~~~Pli~VnH~~a 122 (363)
..|-++..+..++.++.-+..+.
T Consensus 40 ~~Fl~a~G~~iG~s~~e~~~~~~ 62 (216)
T 1vpe_A 40 FTFLKALGKEVGSSRVEEDKIDL 62 (216)
T ss_dssp HHHHHHTSCCCTTSCCCGGGHHH
T ss_pred HHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 99999759967876312125678
No 77
>>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* (A:1-15,A:50-172)
Probab=68.53 E-value=7.1 Score=18.77 Aligned_cols=58 Identities=24% Similarity=0.181 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 45599999999699999999998389822453687406-64301256779999999887514864333
Q gi|254781038|r 51 VPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTA-GPGLMGGLIVGLMTAKAISYVSHKPFYAI 117 (363)
Q Consensus 51 ~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~-gPG~~~~L~vG~~~Ak~la~~~~~Pli~V 117 (363)
+||-+. +.....++++|++++++.++||.|.++. -|...... .+..++..++.+=.+.
T Consensus 14 ~~es~~----~La~~A~~~aL~~agidp~~ID~vv~gs~~~~~~~~~-----~a~~i~~~lgl~~~~~ 72 (138)
T 3il6_A 14 VPENTS----DLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPS-----VACQVQGAIGATEAFA 72 (138)
T ss_dssp CCCCHH----HHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSC-----HHHHHHHHTTCTTCEE
T ss_pred CCCCHH----HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHH-----HHHHHHHHHCCCCCHH
T ss_conf 899879----9999999999875311254443368840258762046-----8899877604887300
No 78
>>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} (A:1-20,A:55-323)
Probab=67.82 E-value=8.2 Score=18.35 Aligned_cols=59 Identities=10% Similarity=-0.019 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH---CCCCCCCHHHHH
Q ss_conf 996999999999983898224536874066430125677999999988751---486433303677
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVS---HKPFYAINHLEG 122 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~---~~Pli~VnH~~a 122 (363)
.+.....++++|+++|++.+|||.+-+....+-...-. .|..++..+ +.|.+.|+..-+
T Consensus 25 ~~La~~Aa~~AL~~aGi~~~dID~vi~~s~~~~~~~~~----~a~~va~~lG~~~~~~~~v~~~c~ 86 (289)
T 3il3_A 25 ATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPS----AACQVQGLLNIDDAISFDLAAAXT 86 (289)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSC----HHHHHHHHTTCSSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCH----HHHHHHHHCCCCCCCEEEECCCCC
T ss_conf 99999999998875255644312687303244433105----677777632788441010221222
No 79
>>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} (A:183-227,A:313-363)
Probab=66.62 E-value=8.7 Score=18.19 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=48.8
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
.+.||=+|=---+.-|.|++-...++.=+.+.+++-=+.| -.+.+...++++|++|+++.+|||.|
T Consensus 5 ~~~~lv~d~GGGt~Dvsi~~~~~~~~~~~~~~~a~~G~~~--------------l~er~~~~i~~aL~~Agl~~~dId~V 70 (96)
T 2kho_A 5 NRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTH--------------LVNRSIEPLKVALQDAGLSVSDIDDV 70 (96)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESS--------------CTGGGTSHHHHHHHTTTCCTTTCSEE
T ss_pred CCEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCCC--------------CHHHHHHHHHHHHHHCCCCHHHCCEE
T ss_conf 8589999979971899999997067872899999457776--------------59999999999999859998999889
Q ss_pred EECCCCCHHHHHHH
Q ss_conf 74066430125677
Q gi|254781038|r 85 AVTAGPGLMGGLIV 98 (363)
Q Consensus 85 avt~gPG~~~~L~v 98 (363)
-..=|..-+|..+-
T Consensus 71 iLVGGSSRIP~Vq~ 84 (96)
T 2kho_A 71 ILVGGQTRMPMVQK 84 (96)
T ss_dssp EEESGGGGSHHHHH
T ss_pred EEECCCCCCHHHHH
T ss_conf 99887465679999
No 80
>>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} (A:120-274)
Probab=64.27 E-value=9.6 Score=17.89 Aligned_cols=29 Identities=17% Similarity=0.036 Sum_probs=25.0
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 55236541334587999999999998689
Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVLHG 301 (363)
Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~~~ 301 (363)
++..++++||++.+..+.+.+++..+++-
T Consensus 114 ~p~~IvlgG~i~~~~~~~~~i~~~~~~~~ 142 (155)
T 2aa4_A 114 DCQCVVVGGSVGLAEGYLALVETYLAQEP 142 (155)
T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSC
T ss_pred CCCEEEEECHHHCCHHHHHHHHHHHHHCC
T ss_conf 98899996904325658999999998445
No 81
>>1jx4_A DNA polymerase IV (family Y); protein-DNA complex, Y-family, transferase/DNA complex; HET: DNA MSE ADI; 1.70A {Sulfolobus solfataricus} (A:1-10,A:78-182)
Probab=63.87 E-value=5.6 Score=19.49 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=27.0
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 36541334587999999999998689889962
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFRFVAP 307 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P 307 (363)
.+-++-|+|.|+.|-+.-.+..+..|+.++.|
T Consensus 70 gl~~SvGIa~nk~lAKiAs~~aKP~G~~~i~~ 101 (115)
T 1jx4_A 70 KITVTVGISKNKVFAKIAADXAKPNGIKVIDD 101 (115)
T ss_dssp CCCEEEEEESSHHHHHHHHHHHCSSCEEECCH
T ss_pred CCCEEEEECCCHHHHHHHHHHCCCCCEECCCC
T ss_conf 99758852672677999997458774440363
No 82
>>1v6s_A Phosphoglycerate kinase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} (A:181-380)
Probab=63.54 E-value=5.6 Score=19.48 Aligned_cols=22 Identities=14% Similarity=0.143 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 9999998875148643330367
Q gi|254781038|r 100 LMTAKAISYVSHKPFYAINHLE 121 (363)
Q Consensus 100 ~~~Ak~la~~~~~Pli~VnH~~ 121 (363)
..|-++..+..++.++.....+
T Consensus 40 n~Fl~A~G~~iG~s~~e~~~~~ 61 (200)
T 1v6s_A 40 FTFLKALGGEVGRSLVEEDRLD 61 (200)
T ss_dssp HHHHHHTTCBCTTCCCCGGGHH
T ss_pred HHHHHHCCCCCCCCHHHHHHHH
T ss_conf 9999976986786244412356
No 83
>>1e4f_T Cell division protein FTSA; bacterial cell division, actin family; 1.9A {Thermotoga maritima} (T:1-86,T:168-189)
Probab=63.34 E-value=9.9 Score=17.78 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=45.9
Q ss_pred CCCC--CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9888--8468875026022077887338888418988731133462121871455-999999996999999999983898
Q gi|254781038|r 1 MSKI--KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPE-VAARAHVDVLDILIKQTLLRANMQ 77 (363)
Q Consensus 1 m~~~--~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~-~A~~~H~~~l~~li~~~l~~a~~~ 77 (363)
|++| +.++.|||-......+-+.+.++..-+|++-.... ..+-..|.+-. .+. .+.|-..++++-+.++.+
T Consensus 1 M~~M~k~~iiv~LDIGSskVk~iv~~~~~~~i~Ilg~g~~~---s~Gi~kG~I~Die~~---~~aI~~ai~~aE~~~g~~ 74 (108)
T 1e4f_T 1 MIDLSKTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVK---SRGLDEGEIKDAIAF---KESVNTLLKELEEQLQKS 74 (108)
T ss_dssp ------CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEE---CCSEETTEESCHHHH---HHHHHHHHHHHHHHHTSC
T ss_pred CCCCCCCCEEEEEECCCCCEEEEEEEEECCEEEEEEEEEEC---CCCCCCCCEECHHHH---HHHHHHHHHHHHHHCCCC
T ss_conf 98788898299999860068999999979999999988876---521128816877999---999999999999870898
Q ss_pred CCCCCEEEECCCCC
Q ss_conf 22453687406643
Q gi|254781038|r 78 ISDMDSIAVTAGPG 91 (363)
Q Consensus 78 ~~~id~Iavt~gPG 91 (363)
+.. +.+..|..
T Consensus 75 I~~---V~visG~~ 85 (108)
T 1e4f_T 75 LRS---DFVISFSS 85 (108)
T ss_dssp CCS---CEEEEECC
T ss_pred CCC---EEEEEECC
T ss_conf 663---39997054
No 84
>>2gup_A ROK family protein; sugar kinase, APC80695, sucrose, structural genomics, PSI, protein structure initiative; HET: SUC; 2.01A {Streptococcus pneumoniae TIGR4} (A:115-272)
Probab=63.02 E-value=10 Score=17.74 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=21.8
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf 552365413345879999999999986
Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVL 299 (363)
Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~ 299 (363)
++..+|++||++.+..+.+++.+..++
T Consensus 113 dp~~IvlgG~i~~~~~l~~~l~~~i~~ 139 (158)
T 2gup_A 113 DPGVISLGGSISQNPDFIQGVKKAVED 139 (158)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCHHCCHHHHHHHHHHHHH
T ss_conf 898899958021328899999999999
No 85
>>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} (A:1-67,A:289-401)
Probab=62.17 E-value=10 Score=17.64 Aligned_cols=34 Identities=3% Similarity=0.069 Sum_probs=13.0
Q ss_pred CCCCCCCCCCHHCC-CCCCCCCCCHHHHHHHHHHH
Q ss_conf 57333458611106-88754221024589999998
Q gi|254781038|r 197 GDGKRFKFPCPLVQ-GTLCDFSFSGLKTSVQKTIC 230 (363)
Q Consensus 197 g~~~~~~~P~p~~~-~~~~dFSFSGLkTav~~~i~ 230 (363)
.+++++++-...-. ..+--+=|.-.|-+=.++++
T Consensus 26 ~~p~KvnLgvGvYrde~G~~~vl~aVk~AE~~l~~ 60 (180)
T 7aat_A 26 TNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAA 60 (180)
T ss_dssp CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHH
T ss_pred CCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 89996885177776888998998899999999961
No 86
>>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} (A:1-122,A:314-332)
Probab=61.46 E-value=11 Score=17.55 Aligned_cols=104 Identities=12% Similarity=0.076 Sum_probs=65.4
Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCE-EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8846887502602207788733888841-898873113346212187145599999999699999999998389822453
Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGE-ILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~-il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363)
.++++||||=.-..+.+++++ .++. +.......... . +.+..++++.+++.+.+ +.
T Consensus 12 ~~~~~lgiDIGgT~i~~al~d---~~g~~i~~~~~~~t~~-~----------------~~~~~~i~~ii~~~~~~---i~ 68 (141)
T 1sz2_A 12 STKYALVGDVGGTNARLALCD---IASGEISQAKTYSGLD-Y----------------PSLEAVIRVYLEEHKVE---VK 68 (141)
T ss_dssp --CEEEEEEEETTEEEEEEEE---TTTCCEEEEEEEEGGG-C----------------SCHHHHHHHHHHHSCCC---CC
T ss_pred CCCEEEEEEECCHHHHHEEEE---CCCCEEEEEEEECCCC-H----------------HHHHHHHHHHHHHCCCC---CC
T ss_conf 433899999780543254698---9999896888878998-7----------------68999999999866998---76
Q ss_pred EEEECC-CC-----CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
Q ss_conf 687406-64-----3012567799999998875148643330367765301322
Q gi|254781038|r 83 SIAVTA-GP-----GLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLT 130 (363)
Q Consensus 83 ~Iavt~-gP-----G~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~ 130 (363)
.|+++. || +..+.+---...++.|...+++|++=.|-..+-+++-.+.
T Consensus 69 ~igI~~pG~Vd~~~~~~~n~~w~~~l~~~L~~~~g~pV~ieNDanaaalaE~~f 122 (141)
T 1sz2_A 69 DGCIAIACPITGDWVAXTNHTWAFSIAEXKKNLGFSHLEIINDFTAVSXAIPXL 122 (141)
T ss_dssp EEEEEESSCCCSSEECCSSSCCCEEHHHHHHHHTCSEEEEEEHHHHHHHHGGGC
T ss_pred EEEEEEECCEECCCEEEEECCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHH
T ss_conf 589993467328811465213367878887422563688611312032665556
No 87
>>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} (A:1-76,A:372-405,A:594-607)
Probab=61.01 E-value=11 Score=17.50 Aligned_cols=99 Identities=16% Similarity=0.239 Sum_probs=65.5
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
++|.|||-=...+++.+.+.++++.+|++--... ..+-- |.+-. .+.....+++++++++....+++.+.
T Consensus 2 kiivgIDIGSSkv~avIaev~dg~i~VLG~G~~~---S~GiK-G~I~d------Ie~a~~aI~~AI~~AE~~ag~i~~vv 71 (124)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYPQARAFVASGIVA---TTGMK-GTRDN------IAGTLAALEQALAKTPWSMSDVSRIY 71 (124)
T ss_dssp CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEE---CCSST-TSGGG------HHHHHHHHHHHHTTSSCCGGGEEEEE
T ss_pred CEEEEEECCCCCEEEEEEEECCCCEEEEECCCCC---CCCCC-CCHHH------HHHHHHHHHHHHHHCCCCHHHHHEEE
T ss_conf 4799996077631589999648953796225456---67756-74778------99999999999997199721001145
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 40664301256779999999887514864333036776
Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGH 123 (363)
Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH 123 (363)
++ +-|| -..|+-++-.+++|+. |--.||.
T Consensus 72 v~-~~Gm-------~~~a~~~~~~~~~~~~-~~g~e~~ 100 (124)
T 1nbw_A 72 LN-EAAM-------QVIARELSARLQTEVV-VGGVEAN 100 (124)
T ss_dssp EE-ECCS-------CCHHHHHHHHHTSEEE-ECSCHHH
T ss_pred EC-CCCE-------EEEEEEEECCCCCEEE-EEECCHH
T ss_conf 11-2465-------8899997424685885-6751789
No 88
>>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* (A:198-359)
Probab=60.92 E-value=11 Score=17.49 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHCC
Q ss_conf 9999999699999999998389822453687406643012567799999998875148643330---367765301
Q gi|254781038|r 55 AARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAIN---HLEGHILTA 127 (363)
Q Consensus 55 A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~Vn---H~~aH~~~~ 127 (363)
..+.-.++++++++++|++.+++.+|||.+....+= ..+-+.+...+++|.=.+. +-.||.-++
T Consensus 51 ~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hq~~---------~~~~~~~~~~l~~~~ek~~~~~~~~GN~~sa 117 (162)
T 3h78_A 51 MFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPN---------LRILDAVQEQLGIPQHKFAVTVDRLGNMASA 117 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSC---------HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGG
T ss_pred HHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEECCCC---------HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
T ss_conf 645332102012201343234775555378833777---------9999999998096988826668512733888
No 89
>>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} (A:1-65,A:286-396)
Probab=60.83 E-value=11 Score=17.60 Aligned_cols=22 Identities=32% Similarity=0.395 Sum_probs=10.4
Q ss_pred CCCCCCCCCCCHHHH-HHHHHHHH
Q ss_conf 068875422102458-99999985
Q gi|254781038|r 209 VQGTLCDFSFSGLKT-SVQKTICA 231 (363)
Q Consensus 209 ~~~~~~dFSFSGLkT-av~~~i~~ 231 (363)
.+.++| |||+||.. ++.++.++
T Consensus 122 ~~Q~GM-Fs~~gLs~~Qv~~Lr~~ 144 (176)
T 2q7w_A 122 IKQNGM-FSFSGLTKEQVLRLREE 144 (176)
T ss_dssp HHCCSS-EEECCCCHHHHHHHHHH
T ss_pred CCCCEE-EEEECCCHHHHHHHHHH
T ss_conf 589727-99749399999999996
No 90
>>2c7y_A 3-ketoacyl-COA thiolase 2; fatty acid metabolism, transferase, oxylipin synthesis, lipid synthesis, acyltransferase; 2.1A {Arabidopsis thaliana} PDB: 2c7z_A (A:)
Probab=59.96 E-value=11 Score=17.38 Aligned_cols=63 Identities=14% Similarity=0.090 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCC-CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 996999999999983898224536874066-430125677999999988751486433303677
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAG-PGLMGGLIVGLMTAKAISYVSHKPFYAINHLEG 122 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~g-PG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~a 122 (363)
.+.....++++|++++++.+|||.+.+..- ++.......+-.........-.+|...|++.-+
T Consensus 39 ~~L~~~A~~~Al~daGl~~~dID~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~ca 102 (404)
T 2c7y_A 39 DDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCS 102 (404)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCCEEEEECCSSCTTHHHHHHHHHHHHTTCCTTSCEEECSCSSC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCC
T ss_conf 9999999999999859798991989999604766667679999999769895203110103345
No 91
>>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} (A:)
Probab=58.94 E-value=9.3 Score=17.97 Aligned_cols=120 Identities=14% Similarity=0.063 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHH-HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC------CCCCCC
Q ss_conf 96999999999983898224536874066430125-67799999998875148643330367765301------322567
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGG-LIVGLMTAKAISYVSHKPFYAINHLEGHILTA------RLTDDI 133 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~-L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~------~l~~~~ 133 (363)
+.+...+++++..++++..+||.+.+...+....+ ...+...+ .-.....+|.+.|++--+=-..+ .+....
T Consensus 41 ~~~~~A~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~v~~~casg~~ai~~A~~~I~sG~ 119 (393)
T 1afw_A 41 NFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACL-ASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQ 119 (393)
T ss_dssp HHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHH-HTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999997288524899889898999837863424079999999-54886433320003565300145888877764036
Q ss_pred CCCCEEEEEECCCEEEEEE---CC-------CCCCEECCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 9984399970687479998---37-------564300022336300238888988528876
Q gi|254781038|r 134 AFPYLVLLVSGGHTQILLV---RD-------VAHYDRLGTTIDDALGECFDKIAKSLGLPY 184 (363)
Q Consensus 134 ~~PfL~LlvSGGhT~l~~~---~~-------~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~y 184 (363)
. -+++|-|+-++--.- +. .......+-+.....|..-++.++..|...
T Consensus 120 ~---~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~tr 177 (393)
T 1afw_A 120 I---DIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISR 177 (393)
T ss_dssp C---SEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCH
T ss_pred C---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCH
T ss_conf 6---521222103554565556523444531100011032014555505554444439788
No 92
>>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis} (A:28-246)
Probab=58.45 E-value=8.7 Score=18.17 Aligned_cols=134 Identities=16% Similarity=0.105 Sum_probs=62.7
Q ss_pred CCEEEEEECCCHH-----HEE-EEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 8468875026022-----077-8873388884189887311334621218714559999999969999999999838982
Q gi|254781038|r 5 KKTVIGIETSCDE-----TAV-AVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQI 78 (363)
Q Consensus 5 ~~~ILgIETScd~-----tsv-aiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~ 78 (363)
-++|-|+|.|..+ ..+ |++-.+-.+.+++...... ......| +|-.=++.- ++ .+-+++++-..+.
T Consensus 12 ~~~VaGvDvsy~~~~~~~~~~a~~Vvl~~~~~~~v~~~~~~-~~~~~PY---IPG~LaFRE---~P-~~l~al~~l~~~P 83 (219)
T 3ga2_A 12 INTTAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHSX-GRISVPY---VSGFLAFRE---LP-LIIEAAKKLETEP 83 (219)
T ss_dssp CSEEEEEEEEEEEETTEEEEEEEEEEEETTTCCEEEEEEEE-EECCCCS---SSSCGGGGT---HH-HHHHHHHHCSSCC
T ss_pred CCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEEEEE-EECCCCC---CCCHHHHCC---CH-HHHHHHHHCCCCC
T ss_conf 63899998754148886179999999976986089999998-5315665---640454300---67-9999998568999
Q ss_pred ----CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH--HHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEE
Q ss_conf ----24536874066430125677999999988751486433303--677653013225679984399970687479998
Q gi|254781038|r 79 ----SDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINH--LEGHILTARLTDDIAFPYLVLLVSGGHTQILLV 152 (363)
Q Consensus 79 ----~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH--~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~ 152 (363)
-|=..++=.++.| .|--|...+++|-|||-- +.++..... ..+.+-.-..-+..+|...=..+
T Consensus 84 dlilvDG~G~~HPR~~G----------lA~HlGv~l~~PtIGVAKs~l~g~~~~~~-~~~~~~g~~~~l~~~ge~vG~~l 152 (219)
T 3ga2_A 84 DVFLFDGNGYLHYNHXG----------VATHAAFFLGKPTIGIAKTYLKIKGCDFV-TPEIEVGAYTDIIIDGEVYGRAL 152 (219)
T ss_dssp SCEEEEBCSSSSTTSCC----------HHHHHHHHHTSCEEEEESSCCCCTTCCCC-CCCSSTTCEEEEEETTEEEEEEE
T ss_pred CEEEECCCCEECCCCCC----------HHHHHHHHCCCCEEEEECCEEECCCCCCC-CCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 99998186101687764----------54420101398877552341651565656-75324686242157995999999
Q ss_pred CCCCC
Q ss_conf 37564
Q gi|254781038|r 153 RDVAH 157 (363)
Q Consensus 153 ~~~~~ 157 (363)
+....
T Consensus 153 rt~~~ 157 (219)
T 3ga2_A 153 RTRRD 157 (219)
T ss_dssp CSSTT
T ss_pred ECCCC
T ss_conf 65899
No 93
>>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} (A:132-285)
Probab=58.41 E-value=3.9 Score=20.61 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=27.1
Q ss_pred CCCEEEEEHHHHH-HHHHHHHHHHHHHHCCCEEEECCH
Q ss_conf 5523654133458-799999999999868988996287
Q gi|254781038|r 273 KQAVLVVSGGVAS-NHFIRASLIDLCVLHGFRFVAPPA 309 (363)
Q Consensus 273 ~~~~lvv~GGVaa-N~~LR~~l~~~~~~~~~~~~~P~~ 309 (363)
++..+|++||+++ ...+.+.+++..+++....+-||.
T Consensus 108 ~p~~IviGG~i~~~~~~~~~~l~~~~~~~~~~~~~~~i 145 (154)
T 3htv_A 108 DPDAVILGGGVXDXPAFPRETLVAXTQKYLRRPLPHQV 145 (154)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTT
T ss_pred CCCEEEEECHHHHCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 88889995825616467899999999998512357679
No 94
>>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} (A:285-435,A:495-515)
Probab=52.96 E-value=15 Score=16.61 Aligned_cols=131 Identities=16% Similarity=0.147 Sum_probs=68.7
Q ss_pred EEEECCCEEEEEECCCC-----------------CCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC-CC
Q ss_conf 99706874799983756-----------------4300022336300238888988528876103556665540573-33
Q gi|254781038|r 140 LLVSGGHTQILLVRDVA-----------------HYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDG-KR 201 (363)
Q Consensus 140 LlvSGGhT~l~~~~~~~-----------------~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~-~~ 201 (363)
+.+|-|++.++.+.... .|-+. ..--..|.+++-+.+.++..|+ .+++.+....+ ..
T Consensus 5 ~~is~GTs~~~~~~t~~~~~~~~~~~~~~~~~~g~y~~~--~~~~~~G~~l~W~~~~~~~~~~---~~~~~~~~~~~~~~ 79 (172)
T 3i8b_A 5 VSISLGTSGVAAAISENPTYDLTGAVSGFADCTGHYLPL--ACTINGSRILDAGRAALGVDYD---ELAKLAFASKPGAN 79 (172)
T ss_dssp EEEEESSSEEEEECBSSCCCCTTSCSEEEECSSSSEEEE--EEESCSTHHHHHHHHHHTCCHH---HHHHHHHHSCTTGG
T ss_pred EEECCCCCEEEEEECCCCCCCCCCCEECCCCCCHHHHHH--HHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHCCCCCC
T ss_conf 013578753568734876668654110124440168988--9987669999999986145578---99999873565557
Q ss_pred CCCCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 45861110688-------75422102458999999851120121068899999999999999999999999876214455
Q gi|254781038|r 202 FKFPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQ 274 (363)
Q Consensus 202 ~~~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~ 274 (363)
-.+..|...+. +..=+|.|+.. ...+.++..++.+.++-.+ +..++..+.. ...+
T Consensus 80 g~~~~P~~~Ger~P~~~~~~~~~~~gl~~-------------~~~~~~l~rAvlEgia~~~----r~~~e~l~~~-g~~~ 141 (172)
T 3i8b_A 80 GITLVPYFDGERTPNRPNATATFSGXTLA-------------NTTRENLARAFVEGLLCSQ----RDCLELIRSL-GASI 141 (172)
T ss_dssp GCEEECCTTCBTTTTBTTCCCEEESCCTT-------------TCSHHHHHHHHHHHHHHHH----HHHHHHHHHT-TCCC
T ss_pred CEEECCCCCCCCCCCCCCCCEEEECCCCC-------------CCCHHHHHHHHHHHHHHHH----HHHHHHHHHC-CCCC
T ss_conf 42533654567787532453036547643-------------4558999999999999999----9999999970-9797
Q ss_pred CEEEEEHHHHHHHHHHHHH
Q ss_conf 2365413345879999999
Q gi|254781038|r 275 AVLVVSGGVASNHFIRASL 293 (363)
Q Consensus 275 ~~lvv~GGVaaN~~LR~~l 293 (363)
+.|+++||.|........-
T Consensus 142 ~~I~~~GGgs~~~~~~~~~ 160 (172)
T 3i8b_A 142 TRILLIGGGATEAVYEAYA 160 (172)
T ss_dssp CEEEEESGGGCHHHHHHHH
T ss_pred CEEEEECCHHCHHHHHHHH
T ss_conf 8799989512989999999
No 95
>>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis mr-1} (A:1-145,A:326-370)
Probab=50.99 E-value=16 Score=16.41 Aligned_cols=112 Identities=14% Similarity=0.098 Sum_probs=64.2
Q ss_pred CCCCEEEEE--ECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCC-------CCCCCCCHHH---HHHHHHHHHHHHHHH
Q ss_conf 888468875--0260220778873388884189887311334621-------2187145599---999999699999999
Q gi|254781038|r 3 KIKKTVIGI--ETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHG-------HYGGVVPEVA---ARAHVDVLDILIKQT 70 (363)
Q Consensus 3 ~~~~~ILgI--ETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~-------~~GGv~P~~A---~~~H~~~l~~li~~~ 70 (363)
+-+|+++|+ =||.|---+|+++.+...-+++......+.+.-. .-+-.-++.. .++-.+.....+++.
T Consensus 2 ~~~~~~iGlMSGTSlDGID~alv~~~g~~~~~~~~~~~p~p~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~l 81 (190)
T 3cqy_A 2 XNKAYYIGLXSGTSXDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAVNNL 81 (190)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCHHHHHHEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98898999865542443625899980893699854243189999999998603786549999999999999999999988
Q ss_pred HHHCCCCCCCCCEEEEC-----CCC-CH-HHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99838982245368740-----664-30-125677999999988751486433
Q gi|254781038|r 71 LLRANMQISDMDSIAVT-----AGP-GL-MGGLIVGLMTAKAISYVSHKPFYA 116 (363)
Q Consensus 71 l~~a~~~~~~id~Iavt-----~gP-G~-~~~L~vG~~~Ak~la~~~~~Pli~ 116 (363)
+++++++.++||+|+.- -.| +- ...|.+| -+.-||...++|+|.
T Consensus 82 l~~~~l~~~~id~IGsHGQTv~H~P~~~~~~TlQiG--~~~~iA~~tgi~VV~ 132 (190)
T 3cqy_A 82 LAKTKIAKDEIIAIGSHGQTVRHXPNLEVGFTLQIG--DPNTIATETGIDVIA 132 (190)
T ss_dssp HHHHCCCGGGEEEEEEEEEEEEEETTSSSCEEEEES--CHHHHHHHHSSCEEE
T ss_pred HHHCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHC--CCHHHHHHHCCCEEE
T ss_conf 642034434435870488557842451134556517--718889870874455
No 96
>>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} (A:326-467)
Probab=50.86 E-value=16 Score=16.39 Aligned_cols=98 Identities=14% Similarity=0.118 Sum_probs=57.6
Q ss_pred CEEEEEECCCH-HHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 46887502602-20778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 6 KTVIGIETSCD-ETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 6 ~~ILgIETScd-~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
+-|||||-=.. -|++|+. |.+|+++...+......... ...-.+.| .+.+++ .+++.|
T Consensus 4 ~rilaiD~G~k~riG~A~~---d~~g~i~~~~~~~~~~~~~~---------~~~~~~~l----~~li~~-----~~~~~i 62 (142)
T 3bzc_A 4 RATLGLDPGLRTGVKVAVV---DATGKLLDTATVYPHAPKNQ---------WDQTLAVL----AALCAK-----HQVELI 62 (142)
T ss_dssp CCEEEEECCSSSCEEEEEE---CTTSCEEEEEEECCSGGGCC---------HHHHHHHH----HHHHHH-----HTCCEE
T ss_pred CEEEEECCCCCCCEEEEEE---CCCCCEEEEEEECCCCCHHH---------HHHHHHHH----HHHHHH-----CCCCEE
T ss_conf 7167767998662599999---89998788678756895444---------99999999----999998-----199289
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 74066430125677999999988751486433303677653
Q gi|254781038|r 85 AVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHIL 125 (363)
Q Consensus 85 avt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~ 125 (363)
.++.|.-..- +..-..+++.+....++|++=|+--.+-.+
T Consensus 63 ViG~g~~~~~-~~~~~~~~~~l~~~~~i~V~~vDE~~st~~ 102 (142)
T 3bzc_A 63 AIGNGTASRE-TDKLAGELIKKYPGMKLTKIMVSEAGASVY 102 (142)
T ss_dssp EEESSTTHHH-HHHHHHHHHHHCGGGCCEEEEECCHHHHHH
T ss_pred EECCCCHHHH-HHHHHHHHHHHCCCCCCEEEEECCHHHHHH
T ss_conf 9889813589-999999999867678862899333247887
No 97
>>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} (A:1-173,A:394-415)
Probab=50.68 E-value=13 Score=16.96 Aligned_cols=160 Identities=13% Similarity=0.142 Sum_probs=76.6
Q ss_pred CCCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9888846887502602207788733888841898873113346------2121871455999999996999999999983
Q gi|254781038|r 1 MSKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQ------HGHYGGVVPEVAARAHVDVLDILIKQTLLRA 74 (363)
Q Consensus 1 m~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~------~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a 74 (363)
|..|.+.||.|-.=.-.+-+++++.+ +.+.+..-...-+.. +...+.. +.....|.+-+..+++.. +.
T Consensus 13 ~~~~~~~ILvIN~GSSSlK~alf~~~--~~~~l~~g~ie~i~~~~~~~~~~~~~~~--~~~~~~~~~ai~~il~~l--~~ 86 (195)
T 2e1z_A 13 ASNEFPVVLVINCGSSSIKFSVLDVA--TCDVLMAGIADGMNTENAFLSINGDKPI--NLAHSNYEDALKAIAFEL--EK 86 (195)
T ss_dssp ----CCEEEEEEECSSEEEEEEEETT--TCCEEEEEEEESTTSSSCEEEETTSCCE--ECCSCCHHHHHHHHHHHH--HT
T ss_pred CCCCCCEEEEECCCCHHHEEEEEECC--CCCEEEEECEEECCCCCCEEEEECCEEE--ECCCCCHHHHHHHHHHHH--HH
T ss_conf 56898469999278262643889889--9878987011003898866998078026--315338999999999999--84
Q ss_pred CCCCCCCCEEEECCCC---CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEE
Q ss_conf 8982245368740664---3012567799999998875148643330367765301322567998439997068747999
Q gi|254781038|r 75 NMQISDMDSIAVTAGP---GLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILL 151 (363)
Q Consensus 75 ~~~~~~id~Iavt~gP---G~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~ 151 (363)
+....++++|+.-.+- -..+.-+|--..-..|-. -.|+-|. |.-+-+........ .+|-+ .++.
T Consensus 87 ~~~~~~i~aVghRvVhGG~~f~~~~~I~~~v~~~L~~--l~~lAPl-Hnp~~L~~i~a~~~-~~P~~--------p~va- 153 (195)
T 2e1z_A 87 RDLTDSVALIGHRIAHGGELFTQSVIITDEIIDNIRR--VSPLAPL-HNYANLSGIDAARH-LFPAV--------RQVA- 153 (195)
T ss_dssp TTCGGGEEEEEEEESCCTTTCSSCEECCHHHHHHHHH--HGGGSHH-HHHHHHHHHHHHHH-HCTTS--------EEEE-
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCEECCHHHHHHHHH--HCCCCCC-CCHHHHHHHHHHHH-HCCCC--------CEEE-
T ss_conf 6861244089716867888877877667899999997--0468875-58576899999998-68999--------8699-
Q ss_pred ECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 8375643000223363002388889885288761035566
Q gi|254781038|r 152 VRDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIE 191 (363)
Q Consensus 152 ~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie 191 (363)
.-|-+.-+-+...||+.|+|-.---.+|
T Consensus 154 ------------vFDTaFH~tlp~~Ar~yaIP~~~~~~~~ 181 (195)
T 2e1z_A 154 ------------VFDTSFHQTLAPEAYLYGLPEEKMIALD 181 (195)
T ss_dssp ------------EETTGGGGGCCHHHHCCSSCHHHHHHHH
T ss_pred ------------EECCCCCCCCCHHHHHHCCCHHHHHHHH
T ss_conf ------------9678213676786865189979999999
No 98
>>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A (A:171-313)
Probab=50.56 E-value=16 Score=16.36 Aligned_cols=65 Identities=11% Similarity=0.031 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHCC
Q ss_conf 9999999969999999999838982245368740664301256779999999887514864333---0367765301
Q gi|254781038|r 54 VAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAI---NHLEGHILTA 127 (363)
Q Consensus 54 ~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~V---nH~~aH~~~~ 127 (363)
...+.=.++++.+++++|++++++.+|||.+....+= ..+-+.++..+++|.=.+ -+--||.-++
T Consensus 35 ~v~~~~~~~~~~~~~~~l~~~g~~~~did~~i~h~~~---------~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sa 102 (143)
T 1zow_A 35 EVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQAN---------IRIMESARERLGISKDKMSVSVNKYGNTSAA 102 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSC---------HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC---------HHHHHHHHHHCCCCHHHHHCCHHCCCCHHHH
T ss_conf 6656555300267888988712898998888873311---------6899999987199977711207126198997
No 99
>>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} (A:210-336)
Probab=50.37 E-value=16 Score=16.34 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH-HHHHCCCCCC-C-----C
Q ss_conf 9699999999998389822453687406643012567799999998875148643330367-7653013225-6-----7
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLE-GHILTARLTD-D-----I 133 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~-aH~~~~~l~~-~-----~ 133 (363)
+.|...++++|.+.++....|+.++ |..||+ ..++..+++|++.++--+ ..+..+.++. + .
T Consensus 14 e~i~~ai~~~l~~~~l~~~ai~~ia-siE~gl-----------~~~a~~l~~pl~~~~~e~L~~v~~~~~~~S~~V~~~~ 81 (127)
T 3eeq_A 14 EEIRDGIYKVLERLNLKRERIGIIA-SIREEV-----------KKIADEFNVRFRLVNEEEINNFMNPCLTPPSKTLIEV 81 (127)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEE-ESCTTH-----------HHHHHHHTCEEEECCHHHHHTCCCTTCCCCCCC----
T ss_pred HHHHHHHHHHHHHCCCCHHHHHEEE-ECCHHH-----------HHHHHHCCCCEEECCHHHHHHCCCCCCCCCCCEEEHH
T ss_conf 8999999999998699978802468-422768-----------9999980997797689999635478899972120020
Q ss_pred C-----CCCEEEEEECCCEEEEEECCC
Q ss_conf 9-----984399970687479998375
Q gi|254781038|r 134 A-----FPYLVLLVSGGHTQILLVRDV 155 (363)
Q Consensus 134 ~-----~PfL~LlvSGGhT~l~~~~~~ 155 (363)
. -| .+++.||++..|++-+..
T Consensus 82 Gv~~VaEa-aAl~aag~~g~Ll~~K~~ 107 (127)
T 3eeq_A 82 GLKGVAEI-SALIAGGRNSKLILRKIA 107 (127)
T ss_dssp --CCHHHH-HHHHHHCTTCCEEEEEEE
T ss_pred CCCHHHHH-HHHHHCCCCCEEEEEEEE
T ss_conf 89758999-999857999758777897
No 100
>>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A (A:)
Probab=49.61 E-value=16 Score=16.26 Aligned_cols=62 Identities=18% Similarity=0.159 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHH-HHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 996999999999983898224536874066430125-677999999988751486433303677
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGG-LIVGLMTAKAISYVSHKPFYAINHLEG 122 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~-L~vG~~~Ak~la~~~~~Pli~VnH~~a 122 (363)
.+.....+.++|+.++++..|||.+.++.-.+.... ...+. .+........+|.+.|+..-+
T Consensus 31 ~~L~~~a~~~Al~dagl~~~~Id~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~a 93 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQ-ASVGAGIPYSVPAWSCQMIXG 93 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHH-HHHHTTCCTTSCEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCHHHHH-HHHHCCCCCEEEEEEEECCCC
T ss_conf 999999999999870969899798999941765645359999-999769963242000002466
No 101
>>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} (A:1-154,A:358-373)
Probab=49.30 E-value=12 Score=17.10 Aligned_cols=107 Identities=7% Similarity=0.029 Sum_probs=49.0
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838-98224536
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRAN-MQISDMDS 83 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~-~~~~~id~ 83 (363)
..+++|||=.-..+.+++++ .+++++............. ..+.+...+++.+++.. .....+..
T Consensus 28 ~~~~igiDIG~t~i~~~l~d---~~g~il~~~~~~~~~~~~~------------~~~~l~~~i~~~~~~~~~~~~~~i~~ 92 (170)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVR---EGKNDSVHACVTRYSMKRK------------DITEIIEFFNEIIELMPASVMKRVKA 92 (170)
T ss_dssp SCEEEEEEECSSEEEEEEEE---ECGGGCEEEEEEEEECTTC------------BGGGHHHHHHHHHHHSCHHHHTTEEE
T ss_pred CCEEEEEEECCHHHHHEEEE---CCCCEEEEEEEEECCCCCC------------CHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 98289999880531017898---8998277889852267889------------98899999999999998734888787
Q ss_pred EEECCCCCHHH----------HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 87406643012----------567799999998875148643330367765301
Q gi|254781038|r 84 IAVTAGPGLMG----------GLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 84 Iavt~gPG~~~----------~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
|+++. ||..- --..+...+..|...+++|++=.|...+..+.-
T Consensus 93 igi~~-pG~vd~~~~~~~~~~~~w~~~~l~~~l~~~~~~pV~i~NDa~aaalaE 145 (170)
T 2q2r_A 93 GVINV-PGPVTGGAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGFGV 145 (170)
T ss_dssp EEEEE-SSCEETTTEECCCSSSBSCEEGGGSCTTTSCTTSEEEEEHHHHHHHHH
T ss_pred EEEEE-ECEEECCEEEEEECCCCCCCCHHHHHHHHCCCCCEEECCHHHHHHHCC
T ss_conf 99994-131779979998436534465577899864887423213688987388
No 102
>>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} (X:1-92,X:240-268)
Probab=49.00 E-value=17 Score=16.20 Aligned_cols=86 Identities=15% Similarity=0.204 Sum_probs=55.3
Q ss_pred EEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE-
Q ss_conf 8875026022077887338888418988731133462121871455999999996999999999983898224536874-
Q gi|254781038|r 8 VIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAV- 86 (363)
Q Consensus 8 ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iav- 86 (363)
+|+||==+-.|-+++++. .+++...+.+..... -..-+...+...+++.+++..+|+.+++
T Consensus 2 LLaIDIGNTniv~Glfdg----~~l~~~~Ri~T~~~~--------------T~DE~~~~l~~ll~~~~i~~~~I~~iiIS 63 (121)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE----GELRQHWRMETDRHK--------------TEDEYGMLVKQLLEHEGLSFEDVKGIIVS 63 (121)
T ss_dssp EEEEEECSSEEEEEEEET----TEEEEEEEEECCTTC--------------CHHHHHHHHHHHHHHTTCCGGGCCEEEEE
T ss_pred EEEEEECCCCEEEEEEEC----CEEEEEEEEECCCCC--------------CHHHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 899998755009999989----999999998358767--------------77899999999998648875432247863
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 0664301256779999999887514864333
Q gi|254781038|r 87 TAGPGLMGGLIVGLMTAKAISYVSHKPFYAI 117 (363)
Q Consensus 87 t~gPG~~~~L~vG~~~Ak~la~~~~~Pli~V 117 (363)
|.=|.+-.. +...+-..++++.+=|
T Consensus 64 SVVP~lt~~------l~~a~k~~f~~~PlvV 88 (121)
T 2h3g_X 64 SVVPPIMFA------LERMCEKYFKIKPLVV 88 (121)
T ss_dssp ESCHHHHHH------HHHHHHHHTCCCCEEC
T ss_pred CCHHHHHHH------HHHHHHHHCCCCEEEE
T ss_conf 104879999------9999998368752996
No 103
>>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii DSM2661} (A:)
Probab=48.99 E-value=17 Score=16.20 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=40.1
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 822453687406643012567799999998875148643330367765301
Q gi|254781038|r 77 QISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 77 ~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
++.+.|+|-++-||+....-.-.....-..+...++|++|| +-||-+..
T Consensus 34 ~l~~~dgivi~GG~~~~~~~~~~~~~li~~~~~~~~PilGi--C~G~Q~l~ 82 (186)
T 2ywj_A 34 DLEGIDALIIPGGESTAIGKLMKKYGLLEKIKNSNLPILGT--CAGMVLLS 82 (186)
T ss_dssp GGTTCSEEEECCSCHHHHHHHHHHTTHHHHHHTCCCCEEEE--THHHHHHS
T ss_pred HHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE--HHHHHHHH
T ss_conf 95077868988999851221111210456775079838987--13467777
No 104
>>2q7t_A Protein TRAI, DNA helicase I; relaxase, hydrolase, conjugation; HET: TMP; 2.42A {Escherichia coli} PDB: 2q7u_A* 2a0i_A 1p4d_A (A:1-248)
Probab=48.88 E-value=15 Score=16.52 Aligned_cols=86 Identities=12% Similarity=-0.025 Sum_probs=53.4
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCH-HHHHHHHHHHCCCCCCCCCCH---H-CCCCCCCCCCCHHHH-HHHHHHHHHCCCCC
Q ss_conf 33630023888898852887610-355666554057333458611---1-068875422102458-99999985112012
Q gi|254781038|r 164 TIDDALGECFDKIAKSLGLPYPG-GVEIEKAALMGDGKRFKFPCP---L-VQGTLCDFSFSGLKT-SVQKTICAFDVLEK 237 (363)
Q Consensus 164 T~Dda~Ge~~DK~ar~Lgl~yPg-Gp~ie~~A~~g~~~~~~~P~p---~-~~~~~~dFSFSGLkT-av~~~i~~~~~~~~ 237 (363)
+-++..|+-+=|.|..|||.-+- ...++++...-+|..-..-.. - ....++||-||-.|+ +++..+. +
T Consensus 25 ~~~~~~~~W~G~gA~~lgL~g~V~~~~f~~l~~G~~P~~~~~~~~~~~~~~~~~G~DlTfsaPKSVSil~a~~-----~- 98 (248)
T 2q7t_A 25 VLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLG-----G- 98 (248)
T ss_dssp TTSCCCCEEESHHHHHHTCCSSCCHHHHHHHHTTBCTTSCBCCCEETTEECSCCEEEEEEECCHHHHHHHHTS-----C-
T ss_pred ECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHC-----C-
T ss_conf 1589987011067897288886489999999669898964101443788773003666880784099998856-----9-
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q ss_conf 10688999999999999999
Q gi|254781038|r 238 QDIADICASFQVTVVRILQA 257 (363)
Q Consensus 238 ~~~~diaasfQ~~i~~~L~~ 257 (363)
-.+|....++++-+.|..
T Consensus 99 --d~~i~~Ah~~AV~~al~~ 116 (248)
T 2q7t_A 99 --DKRLIDAHNQAVDFAVRQ 116 (248)
T ss_dssp --CTHHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHH
T ss_conf --099999999999999999
No 105
>>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} (A:)
Probab=48.53 E-value=17 Score=16.15 Aligned_cols=91 Identities=13% Similarity=0.107 Sum_probs=51.4
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEE-EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 8468875026022077887338888418988-731133462121871455999999996999999999983898224536
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAE-AVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~-~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363)
.|.|||||=.-..|++|+.+ ..+.+..- ......+.... +-.+.|..+ ++ -.+++.
T Consensus 2 ~mriLgiD~G~~riG~Av~d---~~~~~a~~l~~i~~~~~~~~-----------~~~~~L~~i----i~-----~~~~~~ 58 (150)
T 1vhx_A 2 SLRILGLDLGTKTLGVALSD---EXGWTAQGIETIKINEAEGD-----------YGLSRLSEL----IK-----DYTIDK 58 (150)
T ss_dssp CEEEEEEEECSSEEEEEEEC---TTSSSEEEEEEEECBGGGTB-----------CCHHHHHHH----HT-----TSEEEE
T ss_pred CCEEEEEEECCCEEEEEEEC---CCCCCCCCEEEEEECCCCCH-----------HHHHHHHHH----HH-----HHCCCE
T ss_conf 84399999279989999973---89884356044650345622-----------689999999----97-----634362
Q ss_pred EEECCCCC----HHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 87406643----012567799999998875148643330
Q gi|254781038|r 84 IAVTAGPG----LMGGLIVGLMTAKAISYVSHKPFYAIN 118 (363)
Q Consensus 84 Iavt~gPG----~~~~L~vG~~~Ak~la~~~~~Pli~Vn 118 (363)
|++...=. ...-...-..++..++...++|++-|+
T Consensus 59 iviG~p~~~~g~~~~~~~~~~~~~~~l~~~~~i~v~~~d 97 (150)
T 1vhx_A 59 IVLGFPKNXNGTVGPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp EEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 885164234776217889999999973557783279841
No 106
>>3bq0_A POL IV, DBH, DNA polymerase IV; Y-family, lesion bypass; HET: DNA; 2.60A {Sulfolobus acidocaldarius} (A:1-10,A:78-169,A:236-244)
Probab=47.31 E-value=8.7 Score=18.17 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=27.2
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 365413345879999999999986898899628
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
.+-++=|++.|+.|-+.-.+..+..|..++.|.
T Consensus 71 glt~SvGIg~NklLAKlAs~~~KP~G~~vi~~~ 103 (111)
T 3bq0_A 71 KITVTVGVAPNKILAKIIADKSKPNGLGVIRPE 103 (111)
T ss_dssp CCCEEEEEESSHHHHHHHHHTTCSSCEEECCGC
T ss_pred CCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf 863344027861003547751443200235736
No 107
>>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A (A:1-170)
Probab=45.44 E-value=19 Score=15.84 Aligned_cols=66 Identities=17% Similarity=0.074 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 9699999999998389822453687406643012567799999998875148643330367765301
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
+.....++++|++++++.++||.+-++.--+-...-..+...+..+.. .+.|.+.+++--+=..++
T Consensus 53 ~la~~A~~~~L~~~~~~~~~Id~li~~s~~~~~~~~~~a~~v~~~lg~-~~~~~~~v~~~C~sg~~a 118 (170)
T 1zow_A 53 DLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGT-GKVASMDQLAACSGFMYS 118 (170)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTC-CSCCEEEEECGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCC-CCCCCCEECCCCCCCHHH
T ss_conf 999999997776541262102189872343000222122333112233-434331121455521215
No 108
>>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} (A:)
Probab=44.84 E-value=19 Score=15.78 Aligned_cols=62 Identities=16% Similarity=0.107 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH-HHHCCCCCCCHHHH
Q ss_conf 996999999999983-898224536874066430125677999999988-75148643330367
Q gi|254781038|r 60 VDVLDILIKQTLLRA-NMQISDMDSIAVTAGPGLMGGLIVGLMTAKAIS-YVSHKPFYAINHLE 121 (363)
Q Consensus 60 ~~~l~~li~~~l~~a-~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la-~~~~~Pli~VnH~~ 121 (363)
.+.....++++|.++ +++.+|||.+.++...+...+-......+...+ ....+|.+-|+..-
T Consensus 28 ~~L~~~a~~~al~da~gl~~~dId~v~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~ 91 (387)
T 3goa_A 28 EDLSAHLXRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLC 91 (387)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEECGG
T ss_pred HHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCC
T ss_conf 9999999999997279959899999999947754544106999999977999432022432466
No 109
>>3gqc_A DNA repair protein REV1; protein-DNA complex, alternative splicing, DNA damage, DNA repair, DNA synthesis; HET: DNA DOC DCP; 2.50A {Homo sapiens} (A:1-96,A:213-314)
Probab=44.25 E-value=17 Score=16.12 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=27.5
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 365413345879999999999986898899628
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
.+-++-|+|.|..|-+.-.+..+..|+.++.|.
T Consensus 158 glt~SvGIa~NklLAKlAS~~aKPnG~~~i~~~ 190 (198)
T 3gqc_A 158 KCAASVGIGSNILLARMATRKAKPDGQYHLKPE 190 (198)
T ss_dssp SCCEEEEEESSHHHHHHHHHHHCSSCEEECCGG
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 871214664509999999986151554101355
No 110
>>1vkr_A Mannitol-specific PTS system enzyme iiabc components; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli O157} (A:)
Probab=44.08 E-value=20 Score=15.75 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=17.3
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 365413345879999999999986898
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGF 302 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~ 302 (363)
-+|++.|+++...++.++++.+++.|+
T Consensus 17 lvVC~sGiGTS~m~~~~lk~~l~~~~i 43 (125)
T 1vkr_A 17 IVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp EECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 999899965899999999999998499
No 111
>>3gv5_B DNA polymerase IOTA; Y-family polymerase, polymerase IOTA, error prone replication, DNA damage, DNA repair; HET: DNA MSE ADI; 2.00A {Homo sapiens} PDB: 2dpj_A* 2fll_A* 2fln_A* 2flp_A* 3epg_A* 3epi_A* 2dpi_A* 3g6v_A* 3g6y_A* 3g6x_A* 3gv7_B* 3gv8_B* 3h4d_A* 3h4b_A* 2alz_A* 3h40_A* 1t3n_A* 1zet_A* (B:1-37,B:98-238)
Probab=43.87 E-value=7.9 Score=18.45 Aligned_cols=50 Identities=18% Similarity=0.152 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 9999999999999998762144552365413345879999999999986898899628
Q gi|254781038|r 251 VVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 251 i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
....++.++++.+... -.+-++-|+|.|+.|-+.-.++.+..|..++.|.
T Consensus 115 ~a~~ia~~iR~~I~~e--------tGlt~SvGIA~NKlLAKLAs~~~KPnGqtil~~~ 164 (178)
T 3gv5_B 115 VGSQIAAEXREAXYNQ--------LGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPE 164 (178)
T ss_dssp HHHHHHHHHHHHHHHH--------HCCCEEEEEESSHHHHHHHHTSSCSSCEEECCGG
T ss_pred CHHHHHHHHHHHHHHH--------HCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECH
T ss_conf 3999999999999998--------3996588544637767888875310340133111
No 112
>>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A (A:1-416)
Probab=43.56 E-value=20 Score=15.64 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=21.1
Q ss_pred CCCCCCCCHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 12187145599999--999699999999998389822453
Q gi|254781038|r 45 GHYGGVVPEVAARA--HVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 45 ~~~GGv~P~~A~~~--H~~~l~~li~~~l~~a~~~~~~id 82 (363)
.++-++.|..+.+. -.+.......++++.++....++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~l~~a~~a~~~a~~~~~~~~ 103 (416)
T 3hhd_A 64 ASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLR 103 (416)
T ss_dssp TTTTTCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGT
T ss_pred HHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf 7555989999987699999999999999997799868857
No 113
>>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli} (A:1-95)
Probab=43.48 E-value=20 Score=15.64 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=26.2
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 36541334587999999999998689889962
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFRFVAP 307 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P 307 (363)
-++++.|++.++.++.++++...+.++.....
T Consensus 25 lvvC~~G~~ts~ll~~kl~~~~~~~~~~~~i~ 56 (95)
T 1tvm_A 25 IVACGGAVATSTMAAEEIKELCQSHNIPVELI 56 (95)
T ss_dssp EEESCSCSSHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 99999968999999999999999849864123
No 114
>>1t94_A Polymerase (DNA directed) kappa; replication, DNA repair, Y-family DNA polymerase, translesion DNA synthesis, lesion bypass; 2.40A {Homo sapiens} (A:32-43,A:104-270)
Probab=43.27 E-value=13 Score=17.03 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=26.5
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 36541334587999999999998689889962
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFRFVAP 307 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P 307 (363)
.+-++-|+|-|+.|-+.-..+.+..|..++.|
T Consensus 148 Glt~S~GIa~Nk~LAKlAs~~~KPngq~vi~P 179 (179)
T 1t94_A 148 TLTASAGIAPNTMLAKVCSDKNKPNGQYQILP 179 (179)
T ss_dssp SCCEEEEEESSHHHHHHHHHHTTTTCEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99657651530888998898459888766687
No 115
>>1tqy_B Actinorhodin polyketide putative beta-ketoacyl synthase 2; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} (B:)
Probab=43.26 E-value=20 Score=15.61 Aligned_cols=23 Identities=9% Similarity=-0.019 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99699999999998389822453
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id 82 (363)
.+.......++++.+++...+++
T Consensus 80 ~~~~l~aa~~Al~~Ag~~~~~~~ 102 (415)
T 1tqy_B 80 TRLALTAADWALQDAKADPESLT 102 (415)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGSC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999986325841134
No 116
>>1e4f_T Cell division protein FTSA; bacterial cell division, actin family; 1.9A {Thermotoga maritima} (T:190-419)
Probab=43.05 E-value=21 Score=15.59 Aligned_cols=174 Identities=7% Similarity=-0.097 Sum_probs=80.5
Q ss_pred CCCCCCCCCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHH-HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 32256799843999706874799983756430002233630023888-89885288761035566655405733345861
Q gi|254781038|r 128 RLTDDIAFPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFD-KIAKSLGLPYPGGVEIEKAALMGDGKRFKFPC 206 (363)
Q Consensus 128 ~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~D-K~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~ 206 (363)
.+..+-+...+.+=+=||+|.+-++..- ..... .+... -|+-+| ..+..+..++.---.++.............+.
T Consensus 10 g~~~e~~~gv~V~DlGgGT~dvsi~~~g-~~~~~-~~~~~-gg~~~~~~i~~~~~~~~~~ae~~k~~~~~~~~~~~~~~~ 86 (230)
T 1e4f_T 10 LTTPEKDRGVVVVNLGYNFTGLIAYKNG-VPIKI-SYVPV-GMKHVIKDVSAVLDTSFEESERLIITHGNAVYNDLKEEE 86 (230)
T ss_dssp CCHHHHHHCEEEEEECSSCEEEEEEETT-EEEEE-EEESC-CHHHHHHHHHHHHTCCHHHHHHHHHHHCCSCCTTCCCCE
T ss_pred CCCCCCCCCEEEEEECCCEEEEEEEECC-CEEEE-EECCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 4864456616999976965999999678-24999-74103-668899999999735499999999997576534675764
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEHHHHH
Q ss_conf 11068875422102458999999851120121068899999999999999999999999876-21445523654133458
Q gi|254781038|r 207 PLVQGTLCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRK-AFPHKQAVLVVSGGVAS 285 (363)
Q Consensus 207 p~~~~~~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~-~~~~~~~~lvv~GGVaa 285 (363)
......+.+++.. ........++...-+-+++.+.+.++.+-....+ ..+..+..++++||.+-
T Consensus 87 ~~~~~~g~~~~~~---------------~~~~~~~e~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~i~~ivL~GG~sr 151 (230)
T 1e4f_T 87 IQYRGLDGNTIKT---------------TTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAK 151 (230)
T ss_dssp EEEECTTSSCEEE---------------EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CGGGCEEEESGGGG
T ss_pred EEEECCCCCCCEE---------------ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEECCHHC
T ss_conf 8864278988658---------------7199999999999999999999999997465656333445763999882104
Q ss_pred HHHHHHHHHHHHHHCCCEEEEC-CHHHCCCHHHHHHHH
Q ss_conf 7999999999998689889962-878877258999999
Q gi|254781038|r 286 NHFIRASLIDLCVLHGFRFVAP-PARLCTDNAVMIAWA 322 (363)
Q Consensus 286 N~~LR~~l~~~~~~~~~~~~~P-~~~~ctDNAaMIA~a 322 (363)
=..+++.+++... .+++.. +|..|.-.++.+..+
T Consensus 152 ip~i~e~~~~~fg---~~~~~~~~p~~~va~g~a~~~~ 186 (230)
T 1e4f_T 152 IPRINELATEVFK---SPVRTGCYANSDRPSIINADEV 186 (230)
T ss_dssp STTHHHHHHHHHC---SCEEECCGGGSSSCCEETCHHH
T ss_pred CHHHHHHHHHHHC---CCEEEECCCCCCCCCCCCCHHH
T ss_conf 2009999999978---9808936743356554672532
No 117
>>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans} (A:)
Probab=42.28 E-value=21 Score=15.51 Aligned_cols=28 Identities=14% Similarity=0.217 Sum_probs=24.4
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCE
Q ss_conf 3654133458799999999999868988
Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFR 303 (363)
Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~ 303 (363)
-+|++.|++..+.|..+|++.+.++++.
T Consensus 22 lvVC~sG~gtS~ll~~~l~~~~~~~~i~ 49 (110)
T 3czc_A 22 LTACGNGXGSSXVIKXKVENALRQLGVS 49 (110)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999998119999999999999986985
No 118
>>3js6_A Uncharacterized PARM protein; partition, segregation, filament; 1.95A {Staphylococcus aureus} (A:181-321)
Probab=41.17 E-value=22 Score=15.40 Aligned_cols=135 Identities=16% Similarity=0.072 Sum_probs=66.2
Q ss_pred CEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCC
Q ss_conf 43999706874799983756430002233630023888898852887610355666554057333458611106887542
Q gi|254781038|r 137 YLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCDF 216 (363)
Q Consensus 137 fL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~dF 216 (363)
.+.+=+-||+|.+..+++..-..--..+.+..-=++.+.+++.+.-.|..-....+....... ...++
T Consensus 6 v~vvDiGggTtdv~v~~~~~~v~~~~~~~~~Gg~~~~~~I~~~i~~~~~~~~~~~~~~~~~~~------------~~~~~ 73 (141)
T 3js6_A 6 YSVLDFGSGTTIIDTYQNXKRVEEESFVINKGTIDFYKRIASHVSKKSEGASITPRMIEKGLE------------YKQCK 73 (141)
T ss_dssp EEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--------CHHHHHSCCC-----------------
T ss_pred EEEEECCCCEEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH------------HCCHH
T ss_conf 899990898699999969878764320027887799999999999985757012899999988------------55511
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 21024589999998511201210688999999999999999999999998762144552365413345879999999999
Q gi|254781038|r 217 SFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDL 296 (363)
Q Consensus 217 SFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~ 296 (363)
..+ ....+..++...+...+.+.+.+.++.+. .....+..++++||-| +.|++.+++.
T Consensus 74 ~~~---------------~~~~~~~~~i~~~~~~~~~~i~~~l~~~~-----~~~~~i~~IvlvGGgs--~ll~~~i~~~ 131 (141)
T 3js6_A 74 LNQ---------------KTVIDFKDEFYKEQDSLIEEVXSNFEITV-----GNINSIDRIIVTGGGA--NIHFDSLSHY 131 (141)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHHHT-----CCTTSCSEEEEESTTH--HHHHHHHHHH
T ss_pred CCC---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHHCCEEEEECCHH--HHHHHHHHHH
T ss_conf 166---------------54789999999999999999999999838-----9665399699999889--9999999998
Q ss_pred HHHCCCEEEECC
Q ss_conf 986898899628
Q gi|254781038|r 297 CVLHGFRFVAPP 308 (363)
Q Consensus 297 ~~~~~~~~~~P~ 308 (363)
.+.+++.|+
T Consensus 132 ---~g~~v~i~d 140 (141)
T 3js6_A 132 ---YSDVFEKAD 140 (141)
T ss_dssp ---SSSCEECCS
T ss_pred ---HCCCCEECC
T ss_conf ---388837789
No 119
>>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} (A:186-394)
Probab=40.28 E-value=17 Score=16.11 Aligned_cols=25 Identities=16% Similarity=0.082 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 9999999887514864333036776
Q gi|254781038|r 99 GLMTAKAISYVSHKPFYAINHLEGH 123 (363)
Q Consensus 99 G~~~Ak~la~~~~~Pli~VnH~~aH 123 (363)
+..|-++..+..+..++.-+..+..
T Consensus 37 a~~Fl~a~G~~iG~s~~e~~~~~~~ 61 (209)
T 1php_A 37 AYTFVKALGHDVGKSLLEEDKIELA 61 (209)
T ss_dssp HHHHHHHTTCCCTTSCCCGGGHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf 9999998699777333430027799
No 120
>>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} (D:183-227,D:312-363)
Probab=40.00 E-value=23 Score=15.28 Aligned_cols=38 Identities=26% Similarity=0.322 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHH
Q ss_conf 99699999999998389822453687406643012567
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLI 97 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~ 97 (363)
.+.+...++++|++|+++.+|||.|-..=|+.-+|..+
T Consensus 47 ~er~~~~i~~aL~~Agl~~~dId~ViLVGGsSRIP~Vq 84 (97)
T 1dkg_D 47 VNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQ 84 (97)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEEEECCHHHHHHHH
T ss_conf 99999999999998498988999899989254178999
No 121
>>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor A3} (A:)
Probab=39.16 E-value=24 Score=15.19 Aligned_cols=32 Identities=9% Similarity=0.155 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
Q ss_conf 99699999999998389822453687406643
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPG 91 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG 91 (363)
.+.......+++..+++...+.+..-+..-.|
T Consensus 74 ~~~~l~~~~~al~~Ag~~~~~~~~~~~~v~~g 105 (424)
T 1tqy_A 74 SQFAVACAREAFAASGLDPDTLDPARVGVSLG 105 (424)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
T ss_conf 99999999999986289856705653211112
No 122
>>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} (A:)
Probab=38.79 E-value=24 Score=15.15 Aligned_cols=22 Identities=9% Similarity=0.191 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9699999999998389822453
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id 82 (363)
+.......+++..+++.....+
T Consensus 100 ~~~l~aa~~Al~dAgl~~~~~~ 121 (437)
T 2gqd_A 100 QYAIVAAREAVKDAQLDINENT 121 (437)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9999999999997265512567
No 123
>>3fk5_A 3-oxoacyl-synthase III; bacterial blight, XOO4209, FABH, xanthomonas oryzae PV. oryzae KACC10331, cytoplasm, multifunctional enzyme; 2.05A {Xanthomonas oryzae PV} (A:)
Probab=37.89 E-value=25 Score=15.06 Aligned_cols=69 Identities=9% Similarity=0.045 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 999699999999998389822453687406643012567799999998875148643330367765301
Q gi|254781038|r 59 HVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 59 H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
..+......+++|+++++...+||.+.+....+-...-......+..+-.....|.+-|++--+=-+.+
T Consensus 61 ~~~la~~aa~~al~~~~~~~~~id~vi~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~~C~s~~~a 129 (338)
T 3fk5_A 61 ASDAATQAARKALIDAGIGIEKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVANACLAFING 129 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEEEECCSSCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHH
T ss_conf 999999999999998498989999999970258986886999999981899986999753126799999
No 124
>>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* (A:183-372)
Probab=37.52 E-value=25 Score=15.02 Aligned_cols=18 Identities=6% Similarity=-0.033 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHCCCCCCC
Q ss_conf 999999887514864333
Q gi|254781038|r 100 LMTAKAISYVSHKPFYAI 117 (363)
Q Consensus 100 ~~~Ak~la~~~~~Pli~V 117 (363)
..-.+.|+-.+++|++..
T Consensus 40 ~~~l~~lae~~~iPv~~t 57 (190)
T 2pgn_A 40 SEALLKLAEMVGVPVVTT 57 (190)
T ss_dssp HHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHCCEEEEC
T ss_conf 899999999829747623
No 125
>>1jih_A DNA polymerase ETA; translesion, yeast, translation; HET: DNA; 2.25A {Saccharomyces cerevisiae} (A:16-32,A:129-172,A:213-288)
Probab=37.35 E-value=17 Score=16.12 Aligned_cols=46 Identities=7% Similarity=-0.052 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 999999999999999876214455236541334587999999999998689889
Q gi|254781038|r 251 VVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRF 304 (363)
Q Consensus 251 i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~ 304 (363)
....++..+++.+... -.+-++.|+|.|+.|-+....+.+..|..+
T Consensus 89 ~~~~la~~iR~~I~~~--------tglt~SvGIa~NklLAKlAs~~~KPnGq~v 134 (137)
T 1jih_A 89 LGSQVCKGIRDSIKDI--------LGYTTSCGLSSTKNVCKLASNYKKPDAQTI 134 (137)
T ss_dssp HHHHHHHHHHHHHHHH--------HCCCCEEEEESSHHHHHHHHTTTCSSCEEE
T ss_pred HHHHHHHHHHHHHHHH--------HCCCEEEEEECCHHHHHHHHHHCCCCCEEE
T ss_conf 6999999999999886--------598768987066999998887559998799
No 126
>>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A (A:121-275)
Probab=37.31 E-value=25 Score=15.00 Aligned_cols=28 Identities=11% Similarity=0.220 Sum_probs=22.2
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHC
Q ss_conf 5523654133458799999999999868
Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVLH 300 (363)
Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~~ 300 (363)
++..+|++|+|+....+.+.+++...++
T Consensus 104 dP~~IvigG~i~~~~~~l~~i~~~~~~~ 131 (155)
T 3epq_A 104 APXXIILGGGVXQQXQVFSYIYQYVPKI 131 (155)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHH
T ss_pred CCCEEEEECHHHHHHHHHHHHHHHHHHH
T ss_conf 9887999765786555689999999999
No 127
>>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} (A:48-444,A:772-796)
Probab=37.09 E-value=24 Score=15.13 Aligned_cols=56 Identities=13% Similarity=-0.047 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 699999999998389822453687406643012567799999998875148643330
Q gi|254781038|r 62 VLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAIN 118 (363)
Q Consensus 62 ~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~Vn 118 (363)
.+-..++++|++-|++++++-.+--..+=|..+==+-...+-|++|- +++|++||-
T Consensus 36 g~~~~~~~al~~lg~~l~~i~~~e~d~~lgsGGLGrLAgd~lkSaad-L~iP~vG~G 91 (422)
T 2c4m_A 36 GLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVT-QDYPVTGYG 91 (422)
T ss_dssp TCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCEEEEE
T ss_conf 86899999999819999999853767788885089899999999976-896979983
No 128
>>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} (A:165-383)
Probab=36.91 E-value=25 Score=14.96 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=27.4
Q ss_pred CCCEEEEEHHHHHH-HHHHHHHHHHHHHCCCEEEECCHHHC
Q ss_conf 55236541334587-99999999999868988996287887
Q gi|254781038|r 273 KQAVLVVSGGVASN-HFIRASLIDLCVLHGFRFVAPPARLC 312 (363)
Q Consensus 273 ~~~~lvv~GGVaaN-~~LR~~l~~~~~~~~~~~~~P~~~~c 312 (363)
++..+|++||++.+ ..+++.+++..+.+.+.. |+.+-+
T Consensus 158 ~p~~IvigG~~~~~~~~~~~~i~~~l~~~~~~~--~~~~~~ 196 (219)
T 1g99_A 158 GADAVVFTAGIGENSASIRKRILTGLDGIGIKI--DDEKNK 196 (219)
T ss_dssp SCSEEEEEHHHHHHCHHHHHHHHTTCGGGTCCB--CTTGGG
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEE--CHHHHH
T ss_conf 999899868324588999999984302318155--788861
No 129
>>3eo3_A Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-acetylmannosamine kinase; non-protein kinase, sialic acid biosynthesis; 2.84A {Homo sapiens} (A:145-314)
Probab=35.85 E-value=26 Score=14.85 Aligned_cols=27 Identities=19% Similarity=0.429 Sum_probs=21.5
Q ss_pred CCCEEEEEHHHHHH--HHHHHHHHHHHHH
Q ss_conf 55236541334587--9999999999986
Q gi|254781038|r 273 KQAVLVVSGGVASN--HFIRASLIDLCVL 299 (363)
Q Consensus 273 ~~~~lvv~GGVaaN--~~LR~~l~~~~~~ 299 (363)
++..+|++||++.+ ..+++.+++....
T Consensus 130 ~p~~IvigG~i~~~~~~~l~~~~~~~~~~ 158 (170)
T 3eo3_A 130 NPSLVILSGVLASHYIHIVKDVIRQQALS 158 (170)
T ss_dssp CCSEEEEESTTHHHHHHHHHHHHHHHSCG
T ss_pred CCCEEEEECHHHHHHHHHHHHHHHHHCCC
T ss_conf 98989995878870799999999986232
No 130
>>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus HB8} (A:1-75,A:286-344)
Probab=35.81 E-value=16 Score=16.39 Aligned_cols=30 Identities=37% Similarity=0.376 Sum_probs=17.0
Q ss_pred CCHHHHHHHHHHHCCCCCCH-HHHHHHHHHH
Q ss_conf 30023888898852887610-3556665540
Q gi|254781038|r 167 DALGECFDKIAKSLGLPYPG-GVEIEKAALM 196 (363)
Q Consensus 167 da~Ge~~DK~ar~Lgl~yPg-Gp~ie~~A~~ 196 (363)
|.-||..+--...=||.||| ||+.--+...
T Consensus 103 d~~Gqi~~~hSISAGLDYpgVGPeha~L~~~ 133 (134)
T 1x1q_A 103 DHDGQITPAHSVSAGLDYPGVGPEHSYYADA 133 (134)
T ss_dssp C----------------CSBCCHHHHHHHHH
T ss_pred CCCCCCCCEEEECCCCCCCCCCHHHHHHHHC
T ss_conf 2687611102422565657766899999857
No 131
>>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, structural genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum atcc 12472} (A:122-279)
Probab=35.50 E-value=27 Score=14.81 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=20.7
Q ss_pred CCCCCEEEEEHHHHHH-HHHHHHHHHHHH
Q ss_conf 4455236541334587-999999999998
Q gi|254781038|r 271 PHKQAVLVVSGGVASN-HFIRASLIDLCV 298 (363)
Q Consensus 271 ~~~~~~lvv~GGVaaN-~~LR~~l~~~~~ 298 (363)
-.++..++++||+..+ .++++.+++..+
T Consensus 128 ~l~p~~ivigG~~~~~~~~~~~~~~~~l~ 156 (158)
T 1zc6_A 128 QDELPVALCGGLGQALRDWLPPGFRQRLV 156 (158)
T ss_dssp TCCSCEEEESHHHHHTGGGSCHHHHHHCC
T ss_pred CCCCEEEEECHHHHHHHHHHHHHHHCCCC
T ss_conf 49990999874888799998799962250
No 132
>>2aq4_A DNA repair protein REV1; polymerase, PAD, N-digit, G-loop, transferase; HET: DNA DOC DCP; 2.32A {Saccharomyces cerevisiae} PDB: 3bjy_A* (A:1-61,A:133-239)
Probab=35.48 E-value=21 Score=15.51 Aligned_cols=32 Identities=13% Similarity=0.205 Sum_probs=27.0
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 65413345879999999999986898899628
Q gi|254781038|r 277 LVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 277 lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
+-++-|++.|..|-+.-.+.++..|..++.|.
T Consensus 129 ~t~SvGIg~NklLAKlAs~~aKPnG~~~i~~~ 160 (168)
T 2aq4_A 129 CTVSIGCSDSLVLARLALKMAKPNGYNITFKS 160 (168)
T ss_dssp CCEEEEEESSHHHHHHHHHHHCSSCEECCCGG
T ss_pred CCEEEEECCHHHHHHHHHHHCCCCEEEEECCH
T ss_conf 12477635327889987764578606984321
No 133
>>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide- binding, phosphoprotein, polymorphism; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3fzh_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 1ngh_A* 1ngd_A* 1ngf_A* 1bup_A* 1nga_A* ... (A:209-250,A:335-362)
Probab=33.74 E-value=28 Score=14.62 Aligned_cols=64 Identities=17% Similarity=0.244 Sum_probs=40.3
Q ss_pred CCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 88884688750260220778873388884189887311334621218714559999999969999999999838982245
Q gi|254781038|r 2 SKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDM 81 (363)
Q Consensus 2 ~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~i 81 (363)
+..+..||=.|==-=+.-+++++..+..-++++...-.+. | |.| ++++|+.|+++.+||
T Consensus 2 ~~~~~~ilVfDlGGGTfDVSil~~~~~~~~V~at~GD~~L-------G-------------~~p-~~~~l~da~~~~~~i 60 (70)
T 3i33_A 2 AGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL-------G-------------LEP-VEKALRDAKLDKGQI 60 (70)
T ss_dssp SSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTC-------S-------------HHH-HHHHHHHHTCCGGGC
T ss_pred CCCCCEEEEEEECCCEEEEEEEEEECCEEEEEEECCCCCC-------C-------------HHH-HHHHHHHCCCCHHHC
T ss_conf 7898489999938982999999994998999994489880-------7-------------999-999999759987779
Q ss_pred CEEEE
Q ss_conf 36874
Q gi|254781038|r 82 DSIAV 86 (363)
Q Consensus 82 d~Iav 86 (363)
|-|-.
T Consensus 61 ~~vvl 65 (70)
T 3i33_A 61 QEIVL 65 (70)
T ss_dssp CEEEE
T ss_pred CEEEE
T ss_conf 98999
No 134
>>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} (A:181-335)
Probab=31.96 E-value=30 Score=14.43 Aligned_cols=63 Identities=10% Similarity=-0.075 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC----CHHHHHHHHCC
Q ss_conf 9999996999999999983898224536874066430125677999999988751486433----30367765301
Q gi|254781038|r 56 ARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYA----INHLEGHILTA 127 (363)
Q Consensus 56 ~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~----VnH~~aH~~~~ 127 (363)
...-.++++++++++|++++++.+|||.+.....= ....+.++..+++|-=- +=+--||.-++
T Consensus 47 ~~~~~~~~~~~~~~~L~~~g~~~~did~~~~hq~~---------~~~~~~~~~~lgi~~~~~~~~~~~~~Gn~~sa 113 (155)
T 1u6e_A 47 FRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQAN---------SRINELLVKNLQLRPDAVVANDIEHTGNTSAA 113 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSC---------HHHHHHHHHHHTCCTTCEECCTHHHHCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC---------HHHHHHHHHHCCCCHHHEEEHHHCCCCCHHHH
T ss_conf 56555400067999987521463212315632642---------45799999973968353977000563764887
No 135
>>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, lipid metabolism, structural genomics, NPPSFA; 2.10A {Aquifex aeolicus VF5} (A:171-309)
Probab=31.76 E-value=31 Score=14.41 Aligned_cols=62 Identities=11% Similarity=0.142 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHCC
Q ss_conf 9999969999999999838982245368740664301256779999999887514864333---0367765301
Q gi|254781038|r 57 RAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAI---NHLEGHILTA 127 (363)
Q Consensus 57 ~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~V---nH~~aH~~~~ 127 (363)
+.=.++++.+++++|++++++.+|||.+....+= ..+-+.++..+++|-=.+ -+--||.-++
T Consensus 36 ~~~~~~~~~~~~~~l~~~g~~~~did~~~~Hq~~---------~~~~~~~~~~lg~~~e~~~~~~~~~Gn~~sa 100 (139)
T 2ebd_A 36 KVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQAN---------VRIINALAEKLNIPKEKVFVNIQKYGNTSAA 100 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSC---------HHHHHHHHHHTTCCGGGBCCCHHHHCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCC---------HHHHHHHHHHCCCCHHHHHCHHHCCCCHHHH
T ss_conf 8888889998999999809996882345302788---------8999999987396988832328423787897
No 136
>>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus HB8} (A:169-322)
Probab=30.56 E-value=32 Score=14.27 Aligned_cols=64 Identities=14% Similarity=0.049 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHCC
Q ss_conf 9999999699999999998389822453687406643012567799999998875148643---330367765301
Q gi|254781038|r 55 AARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFY---AINHLEGHILTA 127 (363)
Q Consensus 55 A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli---~VnH~~aH~~~~ 127 (363)
..+.=.++++.+++++|++++++.+|||.+....+=. .+-+.++..+++|.= .+-+--||.-++
T Consensus 46 ~~~~~~~~~~~~~~~~l~~~g~~~~did~~i~hq~~~---------~~~~~~~~~lg~~~~~~~~~~~~~Gn~gsa 112 (154)
T 1ub7_A 46 VFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANL---------RIIDAARERLGLPWERVAVNVDRYGNTSTA 112 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCH---------HHHHHHHHTTTCCGGGBCCCHHHHCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHCEEECCCCCH---------HHHHHHHHHCCCCHHHHHCHHHCCCCHHHH
T ss_conf 5455554336889999998398979924001256668---------899999997499978721318222088998
No 137
>>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, lipid metabolism, structural genomics, NPPSFA; 2.10A {Aquifex aeolicus VF5} (A:1-170)
Probab=30.45 E-value=32 Score=14.26 Aligned_cols=67 Identities=13% Similarity=-0.004 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 99699999999998389822453687406643012567799999998875148643330367765301
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
.+.....++++|++++++.++||.+-++...+-...-.... ....+....++|.+.|+.--+.-.++
T Consensus 51 ~~La~~a~~~~L~~~~~~~~~Id~li~g~~~~~~~~~~~~~-~~~~~~g~~~~~~~~v~~~C~~g~~a 117 (170)
T 2ebd_A 51 TYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTAC-LVQAQLKAKGVYAFDISAACSGFIYA 117 (170)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHH-HHHHHHTCTTCEEEEEECGGGHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHCEEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCEECCCHHHHHHH
T ss_conf 99999999854431454876823899850478866433222-33322245744010000440189999
No 138
>>3lm2_A Putative kinase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, transferase; HET: MSE; 1.70A {Agrobacterium tumefaciens} (A:100-226)
Probab=30.32 E-value=32 Score=14.25 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=31.5
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHHHH
Q ss_conf 552365413345879999999999986898899628788772589999999999
Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWAALER 326 (363)
Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag~~~ 326 (363)
++..+|++||++.. .+.++|+.+=..|++++++.+.+-+
T Consensus 83 dPe~IVlGGgi~~~---------------~~~~~~~i~~~~~~~~~~GAa~l~~ 121 (127)
T 3lm2_A 83 EPDEVVIGGGNVER---------------LENLPPKCRRGDNAXAFEGGFRLWK 121 (127)
T ss_dssp CCSEEEEESGGGGG---------------CCCCCTTEEECCTTHHHHHHHHHHH
T ss_pred CCCEEEEECHHHHC---------------HHHHHHHHEECCCCHHHHHHHHHHH
T ss_conf 98989991837717---------------1242466578486278898999720
No 139
>>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima} (A:165-385)
Probab=28.51 E-value=35 Score=14.04 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=24.4
Q ss_pred CCCEEEEEHHHHHH-HHHHHHHHHHHHHCCCE
Q ss_conf 55236541334587-99999999999868988
Q gi|254781038|r 273 KQAVLVVSGGVASN-HFIRASLIDLCVLHGFR 303 (363)
Q Consensus 273 ~~~~lvv~GGVaaN-~~LR~~l~~~~~~~~~~ 303 (363)
++..++++||++.+ ..+++.+++..+.+.+.
T Consensus 158 ~p~~IvigG~~~~~~~~~~~~i~~~~~~~~~~ 189 (221)
T 2iir_A 158 GVDAIVFTAGVGENSPITREDVCSYLEFLGVK 189 (221)
T ss_dssp CCSEEEEEHHHHTTCHHHHHHHHHTTGGGTCC
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHCCEE
T ss_conf 99889986831348799999998530540746
No 140
>>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} (A:1-479,A:800-824)
Probab=28.24 E-value=31 Score=14.40 Aligned_cols=56 Identities=11% Similarity=0.160 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH-HH-HHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 99699999999998389822453687406643012-56-7799999998875148643330
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMG-GL-IVGLMTAKAISYVSHKPFYAIN 118 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~-~L-~vG~~~Ak~la~~~~~Pli~Vn 118 (363)
---|-..++++|++.+++++++ +..-.-|+++. || |-...+-|++|- +++|.+|+-
T Consensus 90 NLGl~d~v~~aL~~~g~~l~~i--~~~E~d~~LgnGGLGrLAacfldS~a~-l~~P~~G~G 147 (504)
T 2gj4_A 90 NLALENACDEATYQLGLDMEEL--EEIEEDAGLGNGGLGRLAACFLDSMAT-LGLAAYGYG 147 (504)
T ss_dssp HHTCHHHHHHHHHHTTCCHHHH--HTTSCCEEECCSHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HCCCHHHHHHHHHHCCCCHHHH--HHCCCCCCCCCCCHHHHHHHHHHHHHH-CCCCEEEEE
T ss_conf 6787899999999809999999--854778778885189999999999985-897969997
No 141
>>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} (A:1-520,A:859-879)
Probab=28.17 E-value=35 Score=14.00 Aligned_cols=58 Identities=16% Similarity=0.092 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 99699999999998389822453687406643012567799999998875148643330
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAIN 118 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~Vn 118 (363)
.....+.+..++.+-|++++|+-..=-..+=|..+==|-...+-|++|- +++|++|+-
T Consensus 131 ~~~~~~~va~~l~E~Gi~~~~~~~~E~d~~LgnGGLGrLAa~~ldS~a~-l~lP~~G~G 188 (541)
T 1ygp_A 131 KGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMAT-EGIPAWGYG 188 (541)
T ss_dssp ---CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH-CCCCEEEEE
T ss_conf 1102799999999829999999854867677884099999999999996-898969997
No 142
>>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: YES; 1.60A {Streptomyces avermitilis ma-4680} (A:)
Probab=25.91 E-value=38 Score=13.73 Aligned_cols=38 Identities=8% Similarity=-0.101 Sum_probs=29.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 22453687406643012567799999998875148643330
Q gi|254781038|r 78 ISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAIN 118 (363)
Q Consensus 78 ~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~Vn 118 (363)
....|.|-|--|-+. +..+...|.-|...+++|++||-
T Consensus 105 ~~~PDLilVDGg~~q---~~~~~gv~~~lg~~l~iP~iGva 142 (237)
T 3goc_A 105 PCPPGLIVCDGYGVA---HPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SSCCSEEEEESCSSC---STTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCCEEEECCCEEE---CCCCCCHHHEEEECCCCCEEEEE
T ss_conf 789999998484234---68776631113210598867542
No 143
>>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} (C:)
Probab=25.81 E-value=39 Score=13.72 Aligned_cols=63 Identities=14% Similarity=0.155 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCEEEECCCCC-HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 9969999999999-8389822453687406643-0125677999999988751486433303677
Q gi|254781038|r 60 VDVLDILIKQTLL-RANMQISDMDSIAVTAGPG-LMGGLIVGLMTAKAISYVSHKPFYAINHLEG 122 (363)
Q Consensus 60 ~~~l~~li~~~l~-~a~~~~~~id~Iavt~gPG-~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~a 122 (363)
.+.....++++|. .++++..|||.+.++.... ...+....-..+...-....+|.+.|++--+
T Consensus 31 ~~L~~~a~~~Al~~dagi~~~~id~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~c~ 95 (390)
T 1wdk_C 31 EDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCG 95 (390)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGG
T ss_pred HHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCC
T ss_conf 99999999999986579698998989999577523332209999999659875344500103455
No 144
>>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} (B:1-52,B:271-319)
Probab=25.74 E-value=27 Score=14.80 Aligned_cols=12 Identities=25% Similarity=0.484 Sum_probs=5.8
Q ss_pred CCCCH-HHHHHHH
Q ss_conf 87610-3556665
Q gi|254781038|r 182 LPYPG-GVEIEKA 193 (363)
Q Consensus 182 l~yPg-Gp~ie~~ 193 (363)
|.||| ||+.--+
T Consensus 85 LDYpgVGPeha~L 97 (101)
T 1qop_B 85 LDFPSVGPQHAYL 97 (101)
T ss_dssp GCCSSCCHHHHHH
T ss_pred CCCCCCCHHHHHH
T ss_conf 0147863366888
No 145
>>2qo3_A Eryaii erythromycin polyketide synthase modules 3 and 4; ketosynthase, acyltransferase, phosphopantetheine; 2.59A {Saccharopolyspora erythraea} (A:1-438,A:865-915)
Probab=25.73 E-value=39 Score=13.71 Aligned_cols=24 Identities=8% Similarity=-0.025 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 999699999999998389822453
Q gi|254781038|r 59 HVDVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 59 H~~~l~~li~~~l~~a~~~~~~id 82 (363)
..+.......++|+++++...+++
T Consensus 95 ~~~l~l~aa~~Al~dAg~~~~~~~ 118 (489)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLR 118 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGT
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf 999999999999998799868868
No 146
>>3ke8_A 4-hydroxy-3-methylbut-2-ENYL diphosphate reductase; induced FIT mechanism, FS4-iron-sulfure-cluster, 3Fe-4S, iron, iron-sulfur; HET: EIP; 1.70A {Escherichia coli} PDB: 3ke9_A* 3kef_A* 3kel_A 3kem_A* 3f7t_A (A:1-20,A:202-326)
Probab=25.67 E-value=39 Score=13.70 Aligned_cols=54 Identities=20% Similarity=0.208 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 068899999999999999999999999876214455236541334587999999999998689889962
Q gi|254781038|r 239 DIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAP 307 (363)
Q Consensus 239 ~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P 307 (363)
...+||++.|+---... .+ . .....++|+||--++.- ++|.+.|++.+.+.|+-
T Consensus 21 ~~dTIC~AT~~RQ~Av~------~L--a-----~~~Dl~iVVGg~nSSNT--~rL~eia~~~g~~s~~I 74 (145)
T 3ke8_A 21 RKDDICYATTNRQEAVR------AL--A-----EQAEVVLVVGSKNSSNS--NRLAELAQRMGKRAFLI 74 (145)
T ss_dssp SSCSCCHHHHHHHHHHH------HH--H-----TTCSEEEEECCTTCHHH--HHHHHHHHHTTCEEEEE
T ss_pred CCCCEEHHHHHHHHHHH------HH--H-----HHCCEEEEECCCCCCCH--HHHHHHHHHHCCCEEEE
T ss_conf 74773062687999999------99--9-----86788999788899548--89999999769978994
No 147
>>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* (A:1-414)
Probab=25.56 E-value=39 Score=13.69 Aligned_cols=61 Identities=3% Similarity=-0.147 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEC-CCCC-HHHHHHHHHHHHHHHH--HHHCCCCCCCHHHHHH
Q ss_conf 969999999999838982245368740-6643-0125677999999988--7514864333036776
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAVT-AGPG-LMGGLIVGLMTAKAIS--YVSHKPFYAINHLEGH 123 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iavt-~gPG-~~~~L~vG~~~Ak~la--~~~~~Pli~VnH~~aH 123 (363)
..-....+++|++++++.+|||.|-+. .-|. ..++. ..-.++.|. -+.+.+.+.+++--+=
T Consensus 54 ~la~~Aa~~aL~~agl~p~dId~lI~at~~~~~~~p~~--a~~v~~~Lg~~g~~~~~~~di~~~C~~ 118 (414)
T 2f82_A 54 SMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSI--KTFLMQLFEKCGNTDVEGVDSTNACYG 118 (414)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCH--HHHHTHHHHTTTCCCCBCCEECSGGGH
T ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCH--HHHHHHHHHHCCCCCCCCEECCCCCCC
T ss_conf 99999999999975999899999999938988777766--999999997438987541211254310
No 148
>>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* (A:1-413)
Probab=24.92 E-value=40 Score=13.61 Aligned_cols=20 Identities=5% Similarity=0.145 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999998389822453
Q gi|254781038|r 63 LDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 63 l~~li~~~l~~a~~~~~~id 82 (363)
......++++.++......+
T Consensus 82 al~~a~~a~~~~~~~~~~~~ 101 (413)
T 2vz8_A 82 LLEVTYEAIVDGGINPASLR 101 (413)
T ss_dssp HHHHHHHHHGGGTCCGGGGT
T ss_pred HHHHHHHHHHHCCCCHHHCC
T ss_conf 99999999998769857769
No 149
>>2gup_A ROK family protein; sugar kinase, APC80695, sucrose, structural genomics, PSI, protein structure initiative; HET: SUC; 2.01A {Streptococcus pneumoniae TIGR4} (A:1-114,A:273-292)
Probab=24.47 E-value=41 Score=13.55 Aligned_cols=97 Identities=18% Similarity=0.114 Sum_probs=60.8
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
..+++|||=+-+...++++ |.+++++......... -.+.+..++++.+++. ++.+|
T Consensus 3 ~~~~igidIg~~~i~~~lv---d~~g~il~~~~~~~~~----------------~~~~i~~~i~~~~~~~-----~i~gI 58 (134)
T 2gup_A 3 AXTIATIDIGGTGIKFASL---TPDGKILDKTSISTPE----------------NLEDLLAWLDQRLSEQ-----DYSGI 58 (134)
T ss_dssp -CCEEEEEEETTEEEEEEE---CTTCCEEEEEEECCCS----------------SHHHHHHHHHHHHTTS-----CCSEE
T ss_pred CCEEEEEEECCHHEEEEEE---ECCCCEEEEEEECCCC----------------CHHHHHHHHHHHHHHC-----CCCEE
T ss_conf 8899999987003799999---0899699999971887----------------6999999999986544-----67579
Q ss_pred EECC-CC-------CHHH-HH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 7406-64-------3012-56-77999999988751486433303677653
Q gi|254781038|r 85 AVTA-GP-------GLMG-GL-IVGLMTAKAISYVSHKPFYAINHLEGHIL 125 (363)
Q Consensus 85 avt~-gP-------G~~~-~L-~vG~~~Ak~la~~~~~Pli~VnH~~aH~~ 125 (363)
+++. || -... -+ .-+...++-|...+++|++=.|-..+=++
T Consensus 59 gia~pG~vd~~~g~v~~~~~~~w~~~~l~~~L~~~~g~PV~i~NDa~aaAl 109 (134)
T 2gup_A 59 AXSVPGAVNQETGVIDGFSAVPYIHGFSWYEALSSYQLPVHLENDANCVGL 109 (134)
T ss_dssp EEEESSEECTTTCBEESCCSSGGGSSSBHHHHTGGGCCCEEEEEHHHHHHH
T ss_pred EEEEECCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCHHHHHH
T ss_conf 985404254022222353322235887423332048961898222116677
No 150
>>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} (A:187-366)
Probab=24.29 E-value=41 Score=13.53 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHCCCCCCCH
Q ss_conf 9999998875148643330
Q gi|254781038|r 100 LMTAKAISYVSHKPFYAIN 118 (363)
Q Consensus 100 ~~~Ak~la~~~~~Pli~Vn 118 (363)
....+.|+-.+++|++..-
T Consensus 38 ~~~l~~lae~~g~Pv~~t~ 56 (180)
T 1ozh_A 38 SKALRRLLETSHIPVTSTY 56 (180)
T ss_dssp HHHHHHHHHHHCCCEEECG
T ss_pred HHHHHHHHHHCCCCCEECC
T ss_conf 8999999986089711023
No 151
>>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* (A:1-197)
Probab=24.11 E-value=41 Score=13.51 Aligned_cols=62 Identities=13% Similarity=0.086 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECC-CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 9699999999998389822453687406-643012567799999998875148643330367765301
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAVTA-GPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iavt~-gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
+.....++++|.+++++.++||.+-++. -|...+.. .+..+...++.|-.+..++.....+.
T Consensus 76 ~la~~A~~~aL~~~~~~~~~Id~vi~~s~~~~~~~~~-----~a~~i~~~lg~~~~~~~~v~~~Cas~ 138 (197)
T 3h78_A 76 ALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPS-----QACLIQPLLGLRHIPVLDIRAQASGL 138 (197)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSC-----HHHHHHHHHTCCSCCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCCCH-----HHHHHHHHCCCCCCCCCCCCCCCCCH
T ss_conf 9999999999988399978820589852245665412-----37898873368986421201244422
No 152
>>3hl0_A Maleylacetate reductase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} (A:160-353)
Probab=23.68 E-value=42 Score=13.45 Aligned_cols=90 Identities=17% Similarity=0.229 Sum_probs=56.6
Q ss_pred CCCCCCCHHHHHHHHCCCCCCC------CCCCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 4864333036776530132256------7998439997068747999837564300022336300238888988528876
Q gi|254781038|r 111 HKPFYAINHLEGHILTARLTDD------IAFPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLPY 184 (363)
Q Consensus 111 ~~Pli~VnH~~aH~~~~~l~~~------~~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~y 184 (363)
+..-.++.|.-+|.+++...-. +-.|.+-- ...-....++..+++-+....-+.+++.-+.+|+|.
T Consensus 74 ~~~~~~~~Hal~~~l~~~~~i~HG~~~ai~lp~vl~--------~~~~~~~~~~~~la~~l~~~~~~~i~~~~~~~glp~ 145 (194)
T 3hl0_A 74 GAVGXSLHHKLCHTLGGSLDLPHAETHAVLLPHTIA--------YVEEAAPNLLAPLAALVGGRAGAGLFDFAARLGAPS 145 (194)
T ss_dssp HHSCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------HHHTTCTTTTHHHHHHHTSCHHHHHHHHHHHHTCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
T ss_conf 567885655450000125687659870588999999--------987665999999999827706999999999869999
Q ss_pred C------HHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 1------03556665540573334586111
Q gi|254781038|r 185 P------GGVEIEKAALMGDGKRFKFPCPL 208 (363)
Q Consensus 185 P------gGp~ie~~A~~g~~~~~~~P~p~ 208 (363)
. .-..|+++|.....+...-|+|+
T Consensus 146 ~L~d~gi~~~~i~~ia~~a~~~~~~~p~~~ 175 (194)
T 3hl0_A 146 SLAALGVGADDLDPXAELATANPYWCPRPI 175 (194)
T ss_dssp CTGGGTCCGGGHHHHHHHHTTSCCCCSSCC
T ss_pred CHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 989849999999999999974811298268
No 153
>>3cf4_G Acetyl-COA decarbonylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri} (G:)
Probab=23.28 E-value=43 Score=13.40 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=25.5
Q ss_pred CEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 2365413345879999999999986898899628
Q gi|254781038|r 275 AVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 275 ~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
+-++++|+-+.+....+.+.+++++.|++++-.+
T Consensus 36 rPvii~G~~~~~~~~~~~l~~lae~~g~Pv~~t~ 69 (170)
T 3cf4_G 36 RPLLMVGTLALDPELLDRVVKISKAANIPIAATG 69 (170)
T ss_dssp SEEEEECSTTCCHHHHHHHHHHHHHHTCCEEECT
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEECH
T ss_conf 9889968886432689999999998497889872
No 154
>>2ppv_A Uncharacterized protein; NP_764104.1, structural genomics, joint center for structural genomics, JCSG; 2.00A {Staphylococcus epidermidis atcc 12228} (A:)
Probab=23.25 E-value=43 Score=13.40 Aligned_cols=15 Identities=7% Similarity=0.222 Sum_probs=7.6
Q ss_pred CCCCCHHHHHHHHHH
Q ss_conf 336300238888988
Q gi|254781038|r 164 TIDDALGECFDKIAK 178 (363)
Q Consensus 164 T~Dda~Ge~~DK~ar 178 (363)
.--.+.-++++.+..
T Consensus 163 ~~~~~~p~al~AI~~ 177 (332)
T 2ppv_A 163 SDVEPXNEAIEALEQ 177 (332)
T ss_dssp CCCCCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHC
T ss_conf 777788679999852
No 155
>>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiamine diphosphate; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* (A:192-368)
Probab=23.11 E-value=43 Score=13.38 Aligned_cols=20 Identities=10% Similarity=0.139 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHCCCCCCCHH
Q ss_conf 99999988751486433303
Q gi|254781038|r 100 LMTAKAISYVSHKPFYAINH 119 (363)
Q Consensus 100 ~~~Ak~la~~~~~Pli~VnH 119 (363)
....+.|+-.+++|++-.-.
T Consensus 37 ~~~l~~lae~~g~Pv~~~~~ 56 (177)
T 2q28_A 37 DEQLREFIESAQIPFLPMSM 56 (177)
T ss_dssp HHHHHHHHHHHTCCEEECGG
T ss_pred HHHHHHHHHHCCCCCCCCCC
T ss_conf 99999997532587522111
No 156
>>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid synthesis, fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A (A:)
Probab=23.08 E-value=43 Score=13.38 Aligned_cols=33 Identities=3% Similarity=-0.245 Sum_probs=19.5
Q ss_pred CCCCHHHHHH--HHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 7145599999--99969999999999838982245
Q gi|254781038|r 49 GVVPEVAARA--HVDVLDILIKQTLLRANMQISDM 81 (363)
Q Consensus 49 Gv~P~~A~~~--H~~~l~~li~~~l~~a~~~~~~i 81 (363)
++-|..+... -...+.....+++..+++...++
T Consensus 85 ~i~~~~~~~~d~~~~~~l~aa~~Al~dagl~~~~~ 119 (438)
T 2iwz_A 85 FVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSE 119 (438)
T ss_dssp TSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSH
T ss_pred CCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 68999997369999999999999998632163013
No 157
>>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} (A:189-270)
Probab=22.99 E-value=43 Score=13.36 Aligned_cols=47 Identities=19% Similarity=0.204 Sum_probs=25.4
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHH
Q ss_conf 552365413345879999999999986898899628788772589999
Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIA 320 (363)
Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA 320 (363)
....++-.|.-.+-+.|++.+ +.+++.+++.+|..+.....-+.+|+
T Consensus 22 ~~~~~i~~~~eps~~~i~~l~-~~ik~~~i~~if~e~~~~~k~~~~ia 68 (82)
T 1pq4_A 22 VQIPIEVEGQEPSAQELKQLI-DTAKENNLTMVFGETQFSTKSSEAIA 68 (82)
T ss_dssp EEEESCBTTBCCCHHHHHHHH-HHHHTTTCCEEEEETTSCCHHHHHHH
T ss_pred CEEECCCCCCCCCHHHHHHHH-HHHHHCCCCEEEECCCCCCHHHHHHH
T ss_conf 352044678899989999999-99997499889972899919999999
No 158
>>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} (A:187-356)
Probab=22.90 E-value=44 Score=13.35 Aligned_cols=32 Identities=13% Similarity=0.077 Sum_probs=15.9
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 65413345879999999999986898899628
Q gi|254781038|r 277 LVVSGGVASNHFIRASLIDLCVLHGFRFVAPP 308 (363)
Q Consensus 277 lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~ 308 (363)
++++|+=+.+....+.++++++..++.++..+
T Consensus 34 vii~G~~~~~~~a~~~l~~lae~~~~pv~~t~ 65 (170)
T 2iht_A 34 VLVVGAAAIRSGAVPAIRALAERLNIPVITTY 65 (170)
T ss_dssp EEEECHHHHHTTCHHHHHHHHHHHTCCEEECS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 20132122343237999999999798989731
No 159
>>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, POL beta, PHP; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A* (A:438-502)
Probab=22.82 E-value=44 Score=13.34 Aligned_cols=23 Identities=17% Similarity=0.502 Sum_probs=18.5
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 38888988528876103556665540
Q gi|254781038|r 171 ECFDKIAKSLGLPYPGGVEIEKAALM 196 (363)
Q Consensus 171 e~~DK~ar~Lgl~yPgGp~ie~~A~~ 196 (363)
.++=-|||.||+||. .+|++++.
T Consensus 3 ~aiRDv~Rvlg~~~~---~~d~iaK~ 25 (65)
T 2hnh_A 3 AVIRDVGRVLGHPYG---FVDRISKL 25 (65)
T ss_dssp HHHHHHHHHTTCCHH---HHHHHHTT
T ss_pred HHHHHHHHHHCCCHH---HHHHHHHH
T ss_conf 999999998485465---69999887
No 160
>>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, structure, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} (A:41-164)
Probab=22.57 E-value=44 Score=13.31 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=30.1
Q ss_pred CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCE--EEECC-------HHHCCCHHHHHHHHHHH
Q ss_conf 445523654133458799999999999868988--99628-------78877258999999999
Q gi|254781038|r 271 PHKQAVLVVSGGVASNHFIRASLIDLCVLHGFR--FVAPP-------ARLCTDNAVMIAWAALE 325 (363)
Q Consensus 271 ~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~--~~~P~-------~~~ctDNAaMIA~ag~~ 325 (363)
..+.+.+++.|+...|.-+--. -.|...|++ ++.|. .+.+..|-.|+-..|.+
T Consensus 24 ~~g~~~~v~~~~s~gN~g~A~A--~~a~~~G~~~~i~~p~~~~~~k~~~~~~~n~~~~~~~Ga~ 85 (124)
T 1tzj_A 24 AQGCDTLVSIGGIQSNQTRQVA--AVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGAD 85 (124)
T ss_dssp HTTCCEEEEEEETTCHHHHHHH--HHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCE
T ss_pred HCCCCEEEEECCCCCHHHHHHH--HHHHHHCCCEEEEECCCCCCCHHHHHHCCCCEEEEEECCC
T ss_conf 7799878998558865899999--9999729947999827755212667741240056541035
No 161
>>3i4a_A N(G),N(G)-dimethylarginine dimethylaminohydrolase 1; DDAH, nitric oxide synthase regulation, acetylation, metal-binding, zinc; HET: LN5; 1.90A {Homo sapiens} PDB: 3i2e_A* (A:1-96,A:292-308)
Probab=22.32 E-value=45 Score=13.28 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=32.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCEEEECCCCCHHHHHH
Q ss_conf 34621218714559999999969999999999-8389822453687406643012567
Q gi|254781038|r 41 IDQHGHYGGVVPEVAARAHVDVLDILIKQTLL-RANMQISDMDSIAVTAGPGLMGGLI 97 (363)
Q Consensus 41 ~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~-~a~~~~~~id~Iavt~gPG~~~~L~ 97 (363)
...+.+.|-+--+.|.+||...+ ++|+ +.|++...+.+---.---|+.+|-.
T Consensus 52 ~lt~~d~g~vD~e~A~~QHe~YV-----~aLR~~lGleVieLPadE~~PD~~~~~~~~ 104 (113)
T 3i4a_A 52 ALRSAKGEEVDVARAERQHQLYV-----GVLGSKLGLQVVELPADESLPDDGLLTCCS 104 (113)
T ss_dssp SCCSSCCCCCCHHHHHHHHHHHH-----HHHHTTTCCEEEEECCCTTCTTTCCSGGGC
T ss_pred HHHCCCCCCCCHHHHHHHHHHHH-----HHHHHHCCCEEEEECCCCCCCCCCCCEECC
T ss_conf 54124679989999999999999-----999871698899928999998898823897
No 162
>>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} (A:)
Probab=22.22 E-value=45 Score=13.26 Aligned_cols=65 Identities=9% Similarity=-0.021 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEE-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 96999999999983898224536874-06643012567799999998875148643330367765301
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAV-TAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iav-t~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363)
+.....++++|++++++.+|||.+.+ |..|....+.. ......+...-+.|.+-|++.-+=.+++
T Consensus 53 ~la~~A~~~~L~~~gl~~~~Id~li~~~~~~~~~~~~~--a~~v~~~~~~~~~~~~~i~~~C~g~~~a 118 (317)
T 1hnj_A 53 TMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSA--ACQIQSMLGIKGCPAFDVAAACAGFTYA 118 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCH--HHHHHHHHTCCSSCEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCH--HHHHHHHHCCCCCEEEEECCCCHHHHHH
T ss_conf 99999999998653356010547998015866654368--9999998579982366524568689999
No 163
>>1wf9_A NPL4 family protein; beta-grAsp fold like domain, hypothetical protein, structural genomics, NPPSFA; NMR {Arabidopsis thaliana} (A:)
Probab=21.67 E-value=46 Score=13.19 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=33.5
Q ss_pred ECCCEEEEEECCC-CCCEECCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 0687479998375-643000223363002388889885288761
Q gi|254781038|r 143 SGGHTQILLVRDV-AHYDRLGTTIDDALGECFDKIAKSLGLPYP 185 (363)
Q Consensus 143 SGGhT~l~~~~~~-~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yP 185 (363)
+..-.+++.+++. +.+++-..+-|..+++..++++..+++|-.
T Consensus 3 ~~~~~milRvrs~~G~~ri~~~~~~~Tv~~L~~~I~~~~~i~~~ 46 (107)
T 1wf9_A 3 SGSSGTMLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIH 46 (107)
T ss_dssp SSCCCEEEEEECSSCEEEEEECCTTSBHHHHHHHHHHHSCCCTT
T ss_pred CCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCHH
T ss_conf 88784699999389988987169617699999999998797978
No 164
>>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} (A:)
Probab=21.66 E-value=46 Score=13.19 Aligned_cols=22 Identities=14% Similarity=0.209 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9699999999998389822453
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMD 82 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id 82 (363)
+.......++++.++......+
T Consensus 79 ~~~l~aa~~Al~~ag~~~~~~~ 100 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELN 100 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHCCCCHHHCC
T ss_conf 9999999999997699802337
No 165
>>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli} (A:182-373)
Probab=21.48 E-value=46 Score=13.16 Aligned_cols=24 Identities=13% Similarity=0.105 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 799999998875148643330367
Q gi|254781038|r 98 VGLMTAKAISYVSHKPFYAINHLE 121 (363)
Q Consensus 98 vG~~~Ak~la~~~~~Pli~VnH~~ 121 (363)
++..|-++..+..+..++.-+..+
T Consensus 36 ma~~Fl~a~G~~ig~s~~e~~~~~ 59 (192)
T 1zmr_A 36 IANTFIAAQGHDVGKSLYEADLVD 59 (192)
T ss_dssp HHHHHHHHTTCCCTTCSCCGGGHH
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 899999981981387520101567
No 166
>>2o2z_A Hypothetical protein; NP_244435.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A (A:)
Probab=21.07 E-value=47 Score=13.11 Aligned_cols=35 Identities=11% Similarity=-0.021 Sum_probs=16.2
Q ss_pred CCEEEEEHHHHHHHHHHHHH----------HHHHHHCCCEEEECC
Q ss_conf 52365413345879999999----------999986898899628
Q gi|254781038|r 274 QAVLVVSGGVASNHFIRASL----------IDLCVLHGFRFVAPP 308 (363)
Q Consensus 274 ~~~lvv~GGVaaN~~LR~~l----------~~~~~~~~~~~~~P~ 308 (363)
...+++-..-..+..+.... .+..++.|++++..+
T Consensus 247 ~D~vlvn~~~~~~~v~~~y~~~g~~~v~~D~~~l~~~Gi~vi~~d 291 (323)
T 2o2z_A 247 VDDILVHGEPISDTVKAKYAKEKAEPVIVDEHKLKALGVGTISDY 291 (323)
T ss_dssp CSEEEEECSCCCHHHHHHHHTTTCCBCCCCHHHHHHTTCEEEEEC
T ss_pred CCEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEECC
T ss_conf 988998799797789999987068866679999986799699404
No 167
>>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum} (A:)
Probab=20.64 E-value=48 Score=13.05 Aligned_cols=13 Identities=8% Similarity=-0.033 Sum_probs=6.3
Q ss_pred HHHHCCCEEEECC
Q ss_conf 9986898899628
Q gi|254781038|r 296 LCVLHGFRFVAPP 308 (363)
Q Consensus 296 ~~~~~~~~~~~P~ 308 (363)
..++.|++++.-+
T Consensus 290 ~l~~~Gi~vi~~d 302 (341)
T 2p0y_A 290 GLREQNCRVISSN 302 (341)
T ss_dssp HHHTTTCEEEEEC
T ss_pred HHHHCCCEEEEEC
T ss_conf 9996698899606
No 168
>>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} (A:120-313)
Probab=20.53 E-value=48 Score=13.03 Aligned_cols=27 Identities=7% Similarity=0.135 Sum_probs=21.2
Q ss_pred CEEEEEHHHHHH-HHHHHHHHHHHHHCC
Q ss_conf 236541334587-999999999998689
Q gi|254781038|r 275 AVLVVSGGVASN-HFIRASLIDLCVLHG 301 (363)
Q Consensus 275 ~~lvv~GGVaaN-~~LR~~l~~~~~~~~ 301 (363)
..++++|||+.+ ..+++.+++...+.-
T Consensus 148 ~~ivlgGgv~~~~~~l~~~~~~~~~~~~ 175 (194)
T 2ch5_A 148 LPILCVGSVWKSWELLKEGFLLALTQGR 175 (194)
T ss_dssp EEEEEESGGGGGHHHHHHHHHHHHHHHC
T ss_pred CEEEEECHHHHCCHHHHHHHHHHHHHHC
T ss_conf 5199988046374789999999998633
No 169
>>3h87_C Putative uncharacterized protein; toxin antitoxin complex, RHH motif, structural genomics; 1.49A {Mycobacterium tuberculosis} (C:1-62)
Probab=20.47 E-value=47 Score=13.12 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHCCCE
Q ss_conf 3458799999999999868988
Q gi|254781038|r 282 GVASNHFIRASLIDLCVLHGFR 303 (363)
Q Consensus 282 GVaaN~~LR~~l~~~~~~~~~~ 303 (363)
|.+-|.|||.+|..-++.-+..
T Consensus 25 GLSR~EYlRR~L~q~A~~sg~t 46 (62)
T 3h87_C 25 GLSRTEYIRRRLAQDAQTARVT 46 (62)
T ss_dssp TCCHHHHHHHHHHHHHTSCCCC
T ss_pred CCCHHHHHHHHHHHHHCCCCCC
T ss_conf 8768899999988762277882
No 170
>>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A (A:)
Probab=20.33 E-value=49 Score=13.00 Aligned_cols=44 Identities=11% Similarity=0.184 Sum_probs=24.5
Q ss_pred CCCCCHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCC--EEEECCCCC
Q ss_conf 87145599999--999699999999998389822453--687406643
Q gi|254781038|r 48 GGVVPEVAARA--HVDVLDILIKQTLLRANMQISDMD--SIAVTAGPG 91 (363)
Q Consensus 48 GGv~P~~A~~~--H~~~l~~li~~~l~~a~~~~~~id--~Iavt~gPG 91 (363)
-++-|..+.+. -.+.......++|..+++...+++ .+.|-.|-+
T Consensus 75 ~~i~~~~~~~~d~~~~~~l~aa~eAl~dAg~~~~~~~~~~~gv~vG~~ 122 (427)
T 3ho9_A 75 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSG 122 (427)
T ss_dssp TTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECS
T ss_pred HCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEEC
T ss_conf 568999997359999999999999999859982463767479999867
No 171
>>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} (A:1-180)
Probab=20.31 E-value=49 Score=13.00 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEE-CCCCCHHHHHHHHHHHHHHHHHHH---CCCCCCCHHHHHH
Q ss_conf 96999999999983898224536874-066430125677999999988751---4864333036776
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAV-TAGPGLMGGLIVGLMTAKAISYVS---HKPFYAINHLEGH 123 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iav-t~gPG~~~~L~vG~~~Ak~la~~~---~~Pli~VnH~~aH 123 (363)
+.....++++|++++++.++||.+.+ +.-|...... .+..++..+ ++|.+.|+.--+=
T Consensus 63 ~la~~A~~~aL~~~gi~~~~Id~vi~~~~~~~~~~~~-----~a~~v~~~~g~~~~~~~~v~~~C~s 124 (180)
T 1u6e_A 63 SMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPP-----AAPMVAASLGAKGILGFDLSAGAAG 124 (180)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSC-----HHHHHHHHHTCTTSEEEEEECGGGH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCH-----HHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 9999999999974456741143689965346656862-----7765443204663211121022123
No 172
>>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} (A:)
Probab=20.28 E-value=49 Score=13.00 Aligned_cols=54 Identities=19% Similarity=0.304 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 9699999999998389822453687406643012567799999998875148643330367
Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLE 121 (363)
Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~ 121 (363)
+.|...++++|.+.++....|++|+...-----++| ..+|..+++|+.-+.--+
T Consensus 25 ~~i~~~i~~aL~~~~l~~~~i~~iati~~K~~E~~L-------~~~A~~l~~pl~~~~~~e 78 (145)
T 2w6k_A 25 EHLRALLERTLGEHGRSLAELDALASIDGKRDEPGL-------RQLATLLERPVHFLAPAV 78 (145)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHH-------HHHHHHHTSCEEEECHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCCHHH-------HHHHHHHCCCEEEECHHH
T ss_conf 999999999999849997885245703313798999-------999999199859858999
No 173
>>3h1q_A Ethanolamine utilization protein EUTJ; structural genomics, PSI-2, protein structure initiative; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-2901} (A:138-256)
Probab=20.24 E-value=49 Score=12.99 Aligned_cols=42 Identities=12% Similarity=0.060 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999876214455236541334587999999999998
Q gi|254781038|r 252 VRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCV 298 (363)
Q Consensus 252 ~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~ 298 (363)
++.+...++++++.+ ..+..++++||-|.=..|++.+++...
T Consensus 73 ~~~~~~~v~~~l~~~-----~~i~~IvL~GG~s~ipgl~~~l~~~~~ 114 (119)
T 3h1q_A 73 IEKXALIVKEVIKNY-----DQTLPVYVVGGTAYLTGFSEEFSRFLG 114 (119)
T ss_dssp HHHHHHHHHHHTTTS-----CSSCCEEEESGGGGSTTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCC-----CCCCCEEEECCCCCCHHHHHHHHHHHC
T ss_conf 777899999999617-----998879998980530129999999978
No 174
>>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} (A:)
Probab=20.10 E-value=49 Score=12.97 Aligned_cols=61 Identities=10% Similarity=-0.050 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEE-EECCCCCHHHHHHHHHHHHHHHHHHHCCC---CCCCHHHHHHHH
Q ss_conf 9969999999999838982245368-74066430125677999999988751486---433303677653
Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSI-AVTAGPGLMGGLIVGLMTAKAISYVSHKP---FYAINHLEGHIL 125 (363)
Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~I-avt~gPG~~~~L~vG~~~Ak~la~~~~~P---li~VnH~~aH~~ 125 (363)
.+.....++++|++++++.+|||.+ .+|.-|.+.... .|.-++..++.| .+.|++.-+=.+
T Consensus 61 ~~la~~Aa~~aL~~ag~~p~~Id~li~~s~~~~~~~~~-----~a~~v~~~lg~~~~~~~~v~~~C~s~~ 125 (339)
T 1mzj_A 61 QVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPP-----LSVAIAHELGADNAGGFDLSAACAGFC 125 (339)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSC-----HHHHHHHHHTCTTCEEEEEECGGGHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCC-----HHHHHHHHHCCCCCEEEEHHHHHHHHH
T ss_conf 99999999999987598957630135301368778952-----999999764678822754631578999
No 175
>>2a9v_A GMP synthase; NP_394403.1, , structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.24A {Thermoplasma acidophilum} (A:)
Probab=20.02 E-value=50 Score=12.96 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=38.0
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf 8224536874066430125677999999988751486433303677653013
Q gi|254781038|r 77 QISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTAR 128 (363)
Q Consensus 77 ~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~ 128 (363)
++...|+|-.+-||+....-.-......-.+...++|++|| +-||-+.+.
T Consensus 51 ~~~~~dgiii~GG~~~~~~~~~~~~~~~~~~~~~~~PiLGI--C~G~Qll~~ 100 (212)
T 2a9v_A 51 ELDGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGI--CVGAQFIAL 100 (212)
T ss_dssp GGTTCSEEEEEEECSCGGGTGGGHHHHHHHHHHCCSCEEEE--THHHHHHHH
T ss_pred HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEE--ECCCEEEEE
T ss_conf 98468907983576554203321245677765158328998--607556543
Done!