HHsearch results for GI: 254781038 and protein with PDBid: 1hux_A

>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.95  E-value=2.9e-26  Score=199.78  Aligned_cols=255  Identities=18%  Similarity=0.192  Sum_probs=190.8

Q ss_pred             CCCEEEEEE---CCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             884688750---26022077887338888418988731133462121871455999999996999999999983898224
Q gi|254781038|r    4 IKKTVIGIE---TSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISD   80 (363)
Q Consensus         4 ~~~~ILgIE---TScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~   80 (363)
                      |+|+.||||   |+   |.+++++   +++++++....+.        +..+.        .....+.+.|++++....+
T Consensus         1 m~m~~lGID~GsT~---tk~vv~d---e~~~i~~~~~~~~--------~~~~~--------~~~~~i~~~l~~~~~~~~~   58 (270)
T 1hux_A            1 MSIYTLGIDVGSTA---SKCIILK---DGKEIVAKSLVAV--------GTGTS--------GPARSISEVLENAHMKKED   58 (270)
T ss_dssp             -CCEEEEEEECSSE---EEEEEEE---TTTEEEEEEEEEC--------CSSCC--------HHHHHHHHHHHHHTCCGGG
T ss_pred             CCCEEEEEEECHHH---EEEEEEE---CCCEEEEEEEEEC--------CCCHH--------HHHHHHHHHHHHCCCCCCC
T ss_conf             98289999948136---9999996---8994999999735--------89847--------8999999999970587554


Q ss_pred             CCEEEECCCC-CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCC-CC
Q ss_conf             5368740664-301256779999999887514864333036776530132256799843999706874799983756-43
Q gi|254781038|r   81 MDSIAVTAGP-GLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVA-HY  158 (363)
Q Consensus        81 id~Iavt~gP-G~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~-~~  158 (363)
                      ++.+++|-.. .+                ...+|...|||+++|...++...+  .+++.+.++|+||.++.+++-. ..
T Consensus        59 ~~~~~~tg~g~~~----------------~~~~~~~~v~E~~a~~~ga~~l~~--~~~~vi~igG~~t~~i~~~~g~~~~  120 (270)
T 1hux_A           59 MAFTLATGYGRNS----------------LEGIADKQMSELSCHAMGASFIWP--NVHTVIDIGGQDVKVIHVENGTMTN  120 (270)
T ss_dssp             CSEEEEESTTTTT----------------TTTTCSEEECHHHHHHHHHHHHCT--TCCEEEEEETTEEEEEEEETTEEEE
T ss_pred             EEEEEECCCHHHH----------------HHHHCCCCCCEEEHHHHHHHHHCC--CCCEEEEECCCCEEEEEECCCCEEE
T ss_conf             2589734761877----------------776056885450099999998689--9999999889881999992896789


Q ss_pred             EECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             00022336300238888988528876103556665540573334586111068875422102458999999851120121
Q gi|254781038|r  159 DRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCDFSFSGLKTSVQKTICAFDVLEKQ  238 (363)
Q Consensus       159 ~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~dFSFSGLkTav~~~i~~~~~~~~~  238 (363)
                      -..+++.|...|+++|++||.||+|||   +++++|.+++.     |.|+   ...+.+|  .||.+.+.+++     ..
T Consensus       121 ~~~~~~c~~GtG~~ld~~a~~lgl~~~---ei~~la~~~~~-----~~~i---~~~c~vF--a~s~i~~~~~~-----g~  182 (270)
T 1hux_A          121 FQMNDKCAAGTGRFLDVMANILEVKVS---DLAELGAKSTK-----RVAI---SSTCTVF--AESEVISQLSK-----GT  182 (270)
T ss_dssp             EEEESSCCTTSHHHHHHHHHHHTCCTT---THHHHHTTCCS-----CCCC---CCCSHHH--HHHHHHHHHHT-----TC
T ss_pred             EECCCCCCCHHHHHHHHHHHHHCCCHH---HHHHHHHCCCC-----CCCC---CCCHHHH--HHHHHHHHHHC-----CC
T ss_conf             953775652266999999987099989---99999853799-----9783---7601275--78899999987-----99


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHH-
Q ss_conf             0688999999999999999999999998762144552365413345879999999999986898899628788772589-
Q gi|254781038|r  239 DIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAV-  317 (363)
Q Consensus       239 ~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAa-  317 (363)
                      ++.|||+++|++|++.+...+.+         ....+.+++.|||++|+.+|+.+++..   +.++++||  .+.+|+| 
T Consensus       183 ~~~dIaa~l~~~v~~~i~~~~~~---------~~~~~~vvl~GG~a~n~~l~~~l~~~l---~~~v~~p~--~~~~~gAl  248 (270)
T 1hux_A          183 DKIDIIAGIHRSVASRVIGLANR---------VGIVKDVVMTGGVAQNYGVRGALEEGL---GVEIKTSP--LAQYNGAL  248 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT---------TCCCSSEEEESGGGGCHHHHHHHHHHH---CSCEECCG--GGGGHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHH---------CCCCCCEEEECCCCCCHHHHHHHHHHH---CCCEEECC--CCCHHHHH
T ss_conf             88999999999999999999973---------578896899788644099999999986---99778799--83277899


Q ss_pred             HHHHHHHHHHHCC
Q ss_conf             9999999999849
Q gi|254781038|r  318 MIAWAALERMEAG  330 (363)
Q Consensus       318 MIA~ag~~~~~~g  330 (363)
                      ++|+.|+++++++
T Consensus       249 GaAl~a~~~~~~~  261 (270)
T 1hux_A          249 GAALYAYKKAAKS  261 (270)
T ss_dssp             HHHHHHHHHTTC-
T ss_pred             HHHHHHHHHHHHC
T ss_conf             9999999987614