HHsearch results for GI: 254781038 and protein with PDBid: 2ap1_A
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=95.92 E-value=0.1 Score=30.43 Aligned_cols=132 Identities=16% Similarity=0.134 Sum_probs=74.0
Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 88468875026022077887338888418988731133462121871455999999996999999999983898224536
Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363)
Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363)
..|+ ||||-=.-.+-++++ |.+++|+....... |+....+-.+.+..++++++.+.+ .+..
T Consensus 23 ~~~y-lGiDiGGT~i~~al~---d~~G~il~~~~~~t-----------~~~~~~~~l~~i~~~i~~~~~~~~----~~~~ 83 (327)
T 2ap1_A 23 NAMY-YGFDIGGTKIALGVF---DSTRRLQWEKRVPT-----------PHTSYSAFLDAVCELVEEADQRFG----VKGS 83 (327)
T ss_dssp CCEE-EEEEECSSEEEEEEE---ETTCCEEEEEEEEC-----------CCSCHHHHHHHHHHHHHHHHHHHT----SCCE
T ss_pred CCEE-EEEEECCCEEEEEEE---CCCCCEEEEEEEEC-----------CCCCHHHHHHHHHHHHHHHHHHCC----CCCE
T ss_conf 9579-999967224999999---19998999999869-----------999999999999999999988638----8728
Q ss_pred EEECCCC------CH--HHH--HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC--CCCEEEEEECCCEEEEE
Q ss_conf 8740664------30--125--677999999988751486433303677653013225679--98439997068747999
Q gi|254781038|r 84 IAVTAGP------GL--MGG--LIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIA--FPYLVLLVSGGHTQILL 151 (363)
Q Consensus 84 Iavt~gP------G~--~~~--L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~--~PfL~LlvSGGhT~l~~ 151 (363)
|+++... |. .+. -.-+.....-|...+++|++-.|+..+-++.-.+..... .-|+.+.++.|=---+.
T Consensus 84 igi~~~G~vd~~~g~i~~~~~~~~~~~~l~~~L~~~~~~~v~~~nD~~~~Al~e~~~g~~~~~~~~~~~~ig~gig~g~~ 163 (327)
T 2ap1_A 84 VGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLV 163 (327)
T ss_dssp EEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSEEEEEE
T ss_pred EEEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEE
T ss_conf 99997886546786483466733246609999999879987982475187888876177652351899996464221377
Q ss_pred ECC
Q ss_conf 837
Q gi|254781038|r 152 VRD 154 (363)
Q Consensus 152 ~~~ 154 (363)
.++
T Consensus 164 ~~g 166 (327)
T 2ap1_A 164 LNG 166 (327)
T ss_dssp ETT
T ss_pred ECC
T ss_conf 457