HHsearch results for GI: 254781038 and protein with PDBid: 2d4w_A
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=97.20 E-value=0.015 Score=36.12 Aligned_cols=135 Identities=16% Similarity=0.093 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC-CCCCCCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 00238888988528876103556665540573-3345861110688-------754221024589999998511201210
Q gi|254781038|r 168 ALGECFDKIAKSLGLPYPGGVEIEKAALMGDG-KRFKFPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDVLEKQD 239 (363)
Q Consensus 168 a~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~-~~~~~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~~~~~~ 239 (363)
..|.+++-..+.+......-...+..+...+. ..+-+| ...+. ...=+|.|+.. ..+
T Consensus 309 ~~G~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~~~lP--~~~G~r~P~~~~~~~g~~~gl~~-------------~~~ 373 (504)
T 2d4w_A 309 VTGSLVQWLRDNLGMFEDAPDVEWLAGKVQDNGGAYFVP--AFSGLFAPYWRPDARGALVGLTR-------------YVN 373 (504)
T ss_dssp CSHHHHHHHHHTTCTTTTCSCTHHHHTTSSSCTTCEEEC--TTCCCSTTTCCCCSCEEEEEECS-------------SCC
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECC--CCCCCCCCCCCCCCCEEECCCCC-------------CCC
T ss_conf 869999999873133335789999853034568847457--66787787768232505405676-------------545
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCH-HHCCCHHHH
Q ss_conf 6889999999999999999999999987621445523654133458799999999999868988996287-887725899
Q gi|254781038|r 240 IADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPA-RLCTDNAVM 318 (363)
Q Consensus 240 ~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~-~~ctDNAaM 318 (363)
..++..++.+.++-.+..-+ +.+++.....++.|+++||.+.|..+++.+.+.+ |.++..++. +-+.=-|||
T Consensus 374 ~~~~~ra~~Egia~~~~~~~----~~l~~~~g~~~~~i~~~GGgs~s~~~~Qi~Advl---g~pV~~~~~~e~~alGaA~ 446 (504)
T 2d4w_A 374 RNHIARAALEATAFQSREVV----DAMNADSGVDLTELRVDGGMVANELLMQFQADQL---GVDVVRPKVAETTALGAAY 446 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HHHHHHHSCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEESCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH---CCEEEECCCCCHHHHHHHH
T ss_conf 89999999999999999999----9999863989887999895232599999999998---9925957988579999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781038|r 319 IAWAAL 324 (363)
Q Consensus 319 IA~ag~ 324 (363)
+|..|.
T Consensus 447 lA~~a~ 452 (504)
T 2d4w_A 447 AAGIAV 452 (504)
T ss_dssp HHHHHH
T ss_pred HHHHHC
T ss_conf 999973