HHSEARCH alignment of GI: 254781038 and SCOP domain: d1okja1

Alignment
>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}
Probab=99.85  E-value=6.8e-22  Score=168.02  Aligned_cols=102  Identities=21%  Similarity=0.375  Sum_probs=90.8

Q ss_pred             EEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             88750260220778873388884189887311334621218714559999999969999999999838982245368740
Q gi|254781038|r    8 VIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVT   87 (363)
Q Consensus         8 ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt   87 (363)
                      ||+|||||+.+|+|+++    +++++.+....                .|.|.+.|.++++++|++++++++|||.|+|+
T Consensus         2 iLaIdTS~~~~sval~~----~~~i~~~~~~~----------------~~~h~~~l~~~i~~~l~~~~~~~~di~~i~v~   61 (106)
T d1okja1           2 ILAIDTATEACSVALWN----DGTVNAHFELC----------------PREHTQRILPMVQDILTTSGTSLTDINALAYG   61 (106)
T ss_dssp             EEEEECSSSEEEEEEEE----TTEEEEEEEEC----------------CSSTTTTHHHHHHHHHHHTTCCGGGCCEEEEE
T ss_pred             EEEEECCCCCEEEEEEE----CCEEEEEEEEC----------------CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf             99999777132999999----99999999975----------------58999999999999998608750025678885


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
Q ss_conf             664301256779999999887514864333036776530132
Q gi|254781038|r   88 AGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARL  129 (363)
Q Consensus        88 ~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l  129 (363)
                      .|||+|||||||+++||+|++++++|+++|||+++|+..++.
T Consensus        62 ~GPGsfTglRig~s~akgla~~~~ip~~~v~sl~~la~~~~~  103 (106)
T d1okja1          62 RGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWR  103 (106)
T ss_dssp             EESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHH
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH
T ss_conf             036765420599999999999829999986879999999898


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: YeaZ-like
domain: Hypothetical protein YeaZ
species: Escherichia coli [TaxId: 562]