HHSEARCH alignment of GI: 254781038 and SCOP domain: d2ch5a2

Alignment
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.09  E-value=0.37  Score=24.93  Aligned_cols=106  Identities=18%  Similarity=0.223  Sum_probs=61.4

Q ss_pred             CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCC-CCC
Q ss_conf             884688750260220778873388884189887311334621218714559999-999969999999999838982-245
Q gi|254781038|r    4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAAR-AHVDVLDILIKQTLLRANMQI-SDM   81 (363)
Q Consensus         4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~-~H~~~l~~li~~~l~~a~~~~-~~i   81 (363)
                      |..+.||||.=.-.|-+.|+   |.++++++....         |+..|..... .-.++|..++++++++++++. .++
T Consensus         1 m~~~~~GIDgGGTkT~~~l~---d~~G~~l~~~~~---------g~~N~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~i   68 (117)
T d2ch5a2           1 MAAIYGGVEGGGTRSEVLLV---SEDGKILAEADG---------LSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPL   68 (117)
T ss_dssp             SSCEEEEEEECTTCEEEEEE---ETTSCEEEEEEE---------CCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCB
T ss_pred             CCCEEEEEECCHHHEEEEEE---CCCCCEEEEEEC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             98589999848025799999---899999999975---------788731100899999999999999987168877550


Q ss_pred             CEEEECCCCCHHHHH--HHHHHHHHHHHHHH---CCCCCCCHHHHHHHH
Q ss_conf             368740664301256--77999999988751---486433303677653
Q gi|254781038|r   82 DSIAVTAGPGLMGGL--IVGLMTAKAISYVS---HKPFYAINHLEGHIL  125 (363)
Q Consensus        82 d~Iavt~gPG~~~~L--~vG~~~Ak~la~~~---~~Pli~VnH~~aH~~  125 (363)
                      ..+.+.    +.++=  .---...+.|...+   ...++=+|-.++=++
T Consensus        69 ~~i~~G----lAG~~~~~~~~~l~~~l~~~~~~~~~~v~v~nDa~~Al~  113 (117)
T d2ch5a2          69 RSLGLS----LSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIA  113 (117)
T ss_dssp             SEEEEE----ETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHH
T ss_pred             CEEEEE----EECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
T ss_conf             389999----633686046899999999877898852999660899876


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: N-acetylglucosamine kinase, NAGK
species: Human (Homo sapiens) [TaxId: 9606]