HHSEARCH alignment of GI: 254781038 and SCOP domain: d2ewsa1

Alignment
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]}
Probab=98.86  E-value=6.4e-07  Score=64.69  Aligned_cols=255  Identities=11%  Similarity=0.052  Sum_probs=136.8

Q ss_pred             EEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             87502602207788733888841898873113346212187145599999999699999999998389822453687406
Q gi|254781038|r    9 IGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTA   88 (363)
Q Consensus         9 LgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~   88 (363)
                      +|||==--.+-++++   |++++++.....    .               +   +..++ +.+.+     .+++.|+.+ 
T Consensus         3 iGIDiGGT~ik~~lv---d~~g~i~~~~~~----~---------------t---~~~i~-~~i~~-----~~~~~i~i~-   50 (267)
T d2ewsa1           3 VGIDAGGTLIKIVQE---QDNQRTFKTELT----K---------------N---IDQVV-EWLNQ-----QQIEKLCLT-   50 (267)
T ss_dssp             EEEEECSSEEEEEEE---CSSCEEEEEEEG----G---------------G---HHHHH-HHHHT-----SCCSEEEEE-
T ss_pred             EEEEECHHHEEEEEE---ECCCCEEEEEEC----C---------------C---HHHHH-HHHHH-----HHHHHEEEE-
T ss_conf             999977203888999---289968999863----5---------------4---89999-99997-----532234662-


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC----CCCCCCCCCCEEEEEECCCEEEEEECCCCCCEECCCC
Q ss_conf             643012567799999998875148643330367765301----3225679984399970687479998375643000223
Q gi|254781038|r   89 GPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA----RLTDDIAFPYLVLLVSGGHTQILLVRDVAHYDRLGTT  164 (363)
Q Consensus        89 gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~----~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T  164 (363)
                      |||..           .+...+..|..-++....+....    ........|+ .+...+....+....+......+|..
T Consensus        51 g~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~g  118 (267)
T d2ewsa1          51 GGNAG-----------VIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADY-IFANVGTGTSLHYFDGQSQRRVGGIG  118 (267)
T ss_dssp             STTHH-----------HHHTTSSSCCEECCHHHHHHHHHHHHHHHTTCCCSCE-EEEEESSSEEEEEECSSCEEEEEEES
T ss_pred             CCCCC-----------CCCHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCH-HHHHCCCCEEEECCCCCEEEEECCCC
T ss_conf             34454-----------3013225166543228888877665665447753000-87753652488635674167630333


Q ss_pred             CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCC-CCCCCHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             36300238888988528876103556665540573334586111068875-42210245899999985112012106889
Q gi|254781038|r  165 IDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLC-DFSFSGLKTSVQKTICAFDVLEKQDIADI  243 (363)
Q Consensus       165 ~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~-dFSFSGLkTav~~~i~~~~~~~~~~~~di  243 (363)
                        ...|-.+++.+..++.+.++  ++-.++..++........+....... ...++........  ............++
T Consensus       119 --~G~g~~~~~~~~~~~~~~~g--e~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  192 (267)
T d2ewsa1         119 --TGGGMIQGLGYLLSQITDYK--QLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGH--VLHHLDADFTPSNK  192 (267)
T ss_dssp             --CSHHHHHHHHHHHHCCCCHH--HHHHHHTTCCCTTTCEETTTC-------CCTTSEEETTTT--GGGCTTSCCCHHHH
T ss_pred             --CCCCEEHHHHHHHCCCCCHH--HHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCC--HHHHHHHHCCHHHH
T ss_conf             --00213213477735999726--7777530477753444420231587755302211222101--01323442022056


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH-HHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHH
Q ss_conf             9999999999999999999999876214455236541334-587999999999998689889962878877258999999
Q gi|254781038|r  244 CASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGV-ASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWA  322 (363)
Q Consensus       244 aasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGV-aaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~a  322 (363)
                      +++.++.+.+.|...+......+      ++..+|+.||| ++|..||+.+++..++++.+++||+.   .|++.+|+.+
T Consensus       193 a~~~~~~~~~~l~~~~~~~~~~~------~~~~Iv~~GG~~~~~~~l~~~i~~~~~~~~~~i~~~~~---~~~aGaiGA~  263 (267)
T d2ewsa1         193 LAAVIGVVGEVVTTMAITVAREF------KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVEN---GAFSGAIGAL  263 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT------TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTT---GGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHC------CCCCEEEECCHHHCCHHHHHHHHHHHHHCCCEEEECCC---CCHHHHHHHH
T ss_conf             79999999999999999887614------99989998970543799999999999768988997798---2399999899


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Type II pantothenate kinase, CoaW
species: Staphylococcus aureus [TaxId: 1280]