HHSEARCH alignment of GI: 254781038 and SCOP domain: d2gupa2

Alignment
>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.06  E-value=0.052  Score=30.84  Aligned_cols=58  Identities=19%  Similarity=0.175  Sum_probs=36.6

Q ss_pred             CCCEEEEEHHHHHHHHH----HHHHHHHHHHCCCEEEECCHHHCC--CHHHHHHHHHHHHHHCC
Q ss_conf             55236541334587999----999999998689889962878877--25899999999999849
Q gi|254781038|r  273 KQAVLVVSGGVASNHFI----RASLIDLCVLHGFRFVAPPARLCT--DNAVMIAWAALERMEAG  330 (363)
Q Consensus       273 ~~~~lvv~GGVaaN~~L----R~~l~~~~~~~~~~~~~P~~~~ct--DNAaMIA~ag~~~~~~g  330 (363)
                      ++..+|++||++.+..+    ++.+.+.+........-|....|.  |+|..++.+.+..-+++
T Consensus       110 dp~~IvlGG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~s~~~~~a~l~GAa~l~l~~~k  173 (175)
T d2gupa2         110 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQEEK  173 (175)
T ss_dssp             CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHHHTT
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             4766998783024599999999999999864545678988998787996989999999999740


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Hypothetical protein SP2142
species: Streptococcus pneumoniae [TaxId: 1313]