HHSEARCH alignment of GI: 254781038 and SCOP domain: d2p3ra2

Alignment
>d2p3ra2 c.55.1.4 (A:254-500) Glycerol kinase {Escherichia coli [TaxId: 562]}
Probab=95.19  E-value=0.11  Score=28.69  Aligned_cols=140  Identities=17%  Similarity=0.164  Sum_probs=80.1

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC--CCCCCCCC------HHCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             233630023888898852887610355666554057--33345861------1106887542210245899999985112
Q gi|254781038|r  163 TTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGD--GKRFKFPC------PLVQGTLCDFSFSGLKTSVQKTICAFDV  234 (363)
Q Consensus       163 ~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~--~~~~~~P~------p~~~~~~~dFSFSGLkTav~~~i~~~~~  234 (363)
                      +..--++|.+++-....++..-. -...+..+....  ..-+-+|.      |.-+ ....=+|.||...          
T Consensus        50 ~g~~~~~g~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~gl~flP~l~G~~~P~~~-~~arg~~~Gl~~~----------  117 (247)
T d2p3ra2          50 EGAVFMAGASIQWLRDEMKLIND-AYDSEYFATKVQNTNGVYVVPAFTGLGAPYWD-PYARGAIFGLTRG----------  117 (247)
T ss_dssp             EEEESCSHHHHHHHHHTSCCCCS-SSCHHHHHTTSSSCTTCEEECCTTCCBTTTCC-TTCCEEEEEECTT----------
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHCCCCCCCCEEEEECCHHHCCCCCC-CCCCCEEEECCCC----------
T ss_conf             66798888999999985012202-56665432037997616887021100454568-7645157613556----------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHH-HCC
Q ss_conf             0121068899999999999999999999999876214455236541334587999999999998689889962878-877
Q gi|254781038|r  235 LEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPAR-LCT  313 (363)
Q Consensus       235 ~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~-~ct  313 (363)
                         -.+.+|..++.+.|.=.+..-++    ..++.....++.+.++||.+.|..+++.+.++.   |.++..|... .+.
T Consensus       118 ---~~~~~i~RAvlEgiaf~~~~~~~----~~~~~~g~~~~~i~v~GG~s~s~~~~Qi~Adv~---g~~v~~~~~~e~~a  187 (247)
T d2p3ra2         118 ---VNANHIIRATLESIAYQTRDVLE----AMQADSGIRLHALRVDGGAVANNFLMQFQSDIL---GTRVERPEVREVTA  187 (247)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESCCCHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHH----HHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHC---CCEEEECCCCCCCH
T ss_conf             ---68999999999999999999997----540114776203575077522779885777725---96489347655328


Q ss_pred             CHHHHHHHHHH
Q ss_conf             25899999999
Q gi|254781038|r  314 DNAVMIAWAAL  324 (363)
Q Consensus       314 DNAaMIA~ag~  324 (363)
                      =-|||.|..+.
T Consensus       188 ~GaA~~aa~~~  198 (247)
T d2p3ra2         188 LGAAYLAGLAV  198 (247)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHC
T ss_conf             99999999970


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Glycerol kinase
domain: Glycerol kinase
species: Escherichia coli [TaxId: 562]