Query gi|254781038|ref|YP_003065451.1| putative DNA-binding/iron metalloprotein/AP endonuclease [Candidatus Liberibacter asiaticus str. psy62] Match_columns 363 No_of_seqs 183 out of 2943 Neff 6.1 Searched_HMMs 13730 Date Wed Jun 1 11:23:19 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254781038.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d2i7na2 c.55.1.14 (A:382-593) 100.0 1.5E-34 1.1E-38 255.3 7.6 178 133-322 25-211 (212) 2 d1okja1 c.55.1.9 (A:1-106) Hyp 99.9 6.8E-22 5E-26 168.0 8.2 102 8-129 2-103 (106) 3 d2a6aa1 c.55.1.9 (A:1-103) Hyp 99.8 3.2E-20 2.4E-24 156.4 9.7 101 6-127 1-101 (103) 4 d1huxa_ c.55.1.5 (A:) Hydroxyg 99.7 1.1E-14 7.9E-19 118.3 21.0 255 5-328 1-256 (259) 5 d2ewsa1 c.55.1.14 (A:1-267) Ty 98.9 6.4E-07 4.7E-11 64.7 19.2 255 9-322 3-263 (267) 6 d2gupa2 c.55.1.10 (A:115-289) 96.1 0.052 3.8E-06 30.8 10.6 58 273-330 110-173 (175) 7 d2p3ra2 c.55.1.4 (A:254-500) G 95.2 0.11 7.7E-06 28.7 10.8 140 163-324 50-198 (247) 8 d2p3ra1 c.55.1.4 (A:2-253) Gly 94.7 0.089 6.5E-06 29.2 8.0 81 5-92 2-85 (252) 9 d1hjra_ c.55.3.6 (A:) RuvC res 94.7 0.14 1E-05 27.9 9.5 101 7-119 2-103 (158) 10 d1zc6a1 c.55.1.5 (A:8-121) Pro 94.1 0.14 1E-05 27.8 7.7 73 5-89 3-75 (114) 11 d2hoea3 c.55.1.10 (A:72-199) N 93.9 0.13 9.5E-06 28.1 7.3 109 6-127 4-122 (128) 12 d1z05a3 c.55.1.10 (A:81-208) T 93.0 0.18 1.3E-05 27.1 6.8 105 6-125 4-119 (128) 13 d1bupa2 c.55.1.1 (A:189-381) H 92.2 0.36 2.6E-05 25.0 11.2 143 137-301 7-170 (193) 14 d2ch5a2 c.55.1.5 (A:1-117) N-a 92.1 0.37 2.7E-05 24.9 8.5 106 4-125 1-113 (117) 15 d1saza2 c.55.1.2 (A:173-375) b 91.9 0.39 2.8E-05 24.8 7.8 76 251-331 101-177 (203) 16 d1z6ra2 c.55.1.10 (A:82-210) M 91.7 0.29 2.1E-05 25.7 6.5 106 6-126 4-121 (129) 17 d2hoea2 c.55.1.10 (A:200-368) 91.5 0.42 3E-05 24.6 7.2 53 273-325 103-158 (169) 18 d2aa4a1 c.55.1.10 (A:1-119) N- 90.8 0.49 3.6E-05 24.1 8.3 100 6-126 1-112 (119) 19 d1r59o2 c.55.1.4 (O:257-491) G 90.7 0.51 3.7E-05 24.0 8.6 146 158-327 45-199 (235) 20 d1z05a2 c.55.1.10 (A:209-405) 89.9 0.59 4.3E-05 23.6 8.0 50 273-325 125-182 (197) 21 d2e1za2 c.55.1.2 (A:193-397) P 88.0 0.37 2.7E-05 24.9 4.7 76 251-327 104-201 (205) 22 d1xc3a2 c.55.1.10 (A:119-294) 84.7 1.2 8.4E-05 21.5 7.3 55 273-328 103-171 (176) 23 d1g99a2 c.55.1.2 (A:198-398) A 81.9 0.79 5.8E-05 22.6 4.0 50 252-302 105-155 (201) 24 d2aa4a2 c.55.1.10 (A:120-289) 80.8 1.6 0.00012 20.5 8.7 51 273-326 114-168 (170) 25 d2d0oa2 c.55.1.6 (A:1-92,A:255 79.4 1.8 0.00013 20.2 7.5 72 6-87 2-74 (241) 26 d1r59o1 c.55.1.4 (O:5-256) Gly 75.0 0.19 1.4E-05 26.9 -0.9 76 6-88 1-78 (252) 27 d2ap1a1 c.55.1.10 (A:118-303) 75.0 2.3 0.00017 19.4 5.6 49 273-324 128-182 (186) 28 d1dkgd2 c.55.1.1 (D:186-383) H 74.6 2.4 0.00017 19.4 11.9 29 271-299 146-174 (198) 29 d2ap1a2 c.55.1.10 (A:1-117) Pu 74.5 2.4 0.00017 19.3 7.9 100 6-126 1-112 (117) 30 d1mzja2 c.95.1.2 (A:184-336) P 72.1 2.7 0.0002 19.0 6.6 52 54-114 41-92 (153) 31 d2ch5a1 c.55.1.5 (A:118-344) N 70.6 2.9 0.00021 18.7 5.1 59 243-301 113-174 (227) 32 d1ub7a2 c.95.1.2 (A:174-322) K 69.7 3.1 0.00022 18.6 6.6 35 55-89 41-75 (149) 33 d1sz2a1 c.55.1.7 (A:3-321) Glu 67.2 3.4 0.00025 18.3 18.6 275 7-330 2-316 (319) 34 d16pka_ c.86.1.1 (A:) Phosphog 65.4 2.1 0.00015 19.8 2.7 42 273-315 229-289 (415) 35 d3bzka5 c.55.3.13 (A:325-473) 64.9 3.8 0.00028 18.0 8.8 67 5-92 4-71 (149) 36 d1u6ea2 c.95.1.2 (A:175-317) K 64.3 3.9 0.00028 17.9 6.6 64 55-127 42-109 (148) 37 d1u0ma2 c.95.1.2 (A:202-349) P 64.0 2.8 0.00021 18.8 3.2 55 49-117 36-90 (148) 38 d1wdkc1 c.95.1.1 (C:2-263) Fat 63.9 3.2 0.00023 18.5 3.5 63 61-127 32-100 (262) 39 d1u0ma1 c.95.1.2 (A:2-201) Put 63.4 4 0.00029 17.8 5.1 56 62-119 78-134 (200) 40 d1zxoa2 c.55.1.5 (A:107-280) H 62.9 3.7 0.00027 18.0 3.6 33 271-305 124-156 (174) 41 d3eeqa1 c.151.1.1 (A:215-335) 62.4 4.2 0.0003 17.7 4.4 80 61-154 15-107 (121) 42 d1hnja2 c.95.1.2 (A:175-317) K 59.6 4.7 0.00034 17.3 6.8 64 55-127 38-104 (143) 43 d2b06a1 d.113.1.1 (A:1-155) Hy 58.8 4.8 0.00035 17.2 5.4 73 1-88 1-77 (155) 44 d1j5pa4 c.2.1.3 (A:-1-108,A:22 55.9 5.4 0.00039 16.9 5.9 50 270-326 71-120 (132) 45 d1tqyb2 c.95.1.1 (B:210-403) A 54.4 5.7 0.00041 16.8 5.6 60 64-127 65-127 (194) 46 d1zbsa1 c.55.1.5 (A:108-283) H 53.7 5.8 0.00042 16.7 7.2 32 273-306 127-158 (176) 47 d1ltka_ c.86.1.1 (A:) Phosphog 50.8 4.4 0.00032 17.5 2.4 42 273-315 231-292 (417) 48 d1ee0a2 c.95.1.2 (A:236-395) P 48.8 6.9 0.0005 16.2 3.7 36 50-89 40-75 (160) 49 d1vpea_ c.86.1.1 (A:) Phosphog 48.2 5.6 0.00041 16.8 2.5 42 273-315 210-270 (398) 50 d1a9xb2 c.23.16.1 (B:1653-1880 47.8 6.9 0.0005 16.2 3.0 50 79-129 79-131 (228) 51 d1phpa_ c.86.1.1 (A:) Phosphog 47.7 4.6 0.00034 17.4 2.1 81 60-159 37-121 (394) 52 d1z6ra3 c.55.1.10 (A:211-406) 46.4 7.5 0.00054 15.9 9.3 48 273-323 124-179 (196) 53 d1qpga_ c.86.1.1 (A:) Phosphog 45.5 5.8 0.00042 16.7 2.3 51 93-158 73-123 (415) 54 d1jcea2 c.55.1.1 (A:141-336) P 45.4 7.7 0.00056 15.8 3.3 50 275-327 139-189 (196) 55 d1t94a2 e.8.1.7 (A:75-407) DNA 45.2 5.7 0.00041 16.8 2.2 33 277-309 233-265 (333) 56 d1ulqa1 c.95.1.1 (A:3-275) Bet 44.4 8 0.00058 15.7 4.8 78 43-127 11-93 (273) 57 d1woqa2 c.55.1.10 (A:140-263) 44.1 8.1 0.00059 15.7 3.7 44 273-324 75-119 (124) 58 d1teda_ c.95.1.2 (A:) Polyketi 43.6 8.2 0.0006 15.7 4.2 56 62-119 95-151 (372) 59 d1woqa1 c.55.1.10 (A:11-139) I 43.5 8.2 0.0006 15.6 9.4 108 6-126 2-120 (129) 60 d1u0ua2 c.95.1.2 (A:238-393) D 42.5 8.5 0.00062 15.5 3.9 59 44-111 30-88 (156) 61 d1bi5a2 c.95.1.2 (A:236-389) C 42.3 8.6 0.00063 15.5 3.7 51 48-107 33-83 (154) 62 d1afwa2 c.95.1.1 (A:294-417) T 42.0 8.7 0.00063 15.5 2.8 25 64-88 27-51 (124) 63 d1m3ka2 c.95.1.1 (A:269-392) B 41.6 8.8 0.00064 15.4 2.8 25 64-88 25-49 (124) 64 d1v6sa_ c.86.1.1 (A:) Phosphog 39.7 6.6 0.00048 16.3 1.9 60 60-123 35-94 (390) 65 d1hdia_ c.86.1.1 (A:) Phosphog 37.8 8.9 0.00065 15.4 2.3 24 100-123 75-98 (413) 66 d1u6ea1 c.95.1.2 (A:-10-174) K 36.5 10 0.00076 14.9 4.5 58 62-120 64-121 (184) 67 d1hnja1 c.95.1.2 (A:1-174) Ket 35.7 11 0.00079 14.8 4.5 57 63-121 55-112 (174) 68 d1saza1 c.55.1.2 (A:1-172) but 34.7 11 0.00081 14.7 7.3 142 4-184 2-146 (172) 69 d1nbwa2 c.55.1.6 (A:2-91,A:257 34.3 11 0.00083 14.7 6.1 72 6-87 1-72 (239) 70 d1m3ka1 c.95.1.1 (A:1-268) Bio 34.1 11 0.00083 14.7 6.0 58 61-122 29-90 (268) 71 d1jiha2 e.8.1.7 (A:1-389) DNA 33.3 7.8 0.00057 15.8 1.4 56 240-307 233-288 (389) 72 d1ox0a2 c.95.1.1 (A:252-409) B 33.2 12 0.00086 14.6 5.6 62 64-127 29-90 (158) 73 d1ub7a1 c.95.1.2 (A:2-173) Ket 32.4 12 0.00088 14.5 3.9 53 64-120 54-108 (172) 74 d1wdkc2 c.95.1.1 (C:264-391) F 31.9 12 0.0009 14.4 2.8 25 64-88 26-50 (128) 75 d1ulqa2 c.95.1.1 (A:276-400) B 30.3 13 0.00096 14.2 3.0 23 65-87 25-47 (125) 76 d2ihta1 c.31.1.3 (A:198-374) C 29.9 13 0.00097 14.2 3.5 17 100-116 36-52 (177) 77 d1zpda1 c.31.1.3 (A:188-362) P 28.6 14 0.001 14.1 3.8 18 100-117 39-56 (175) 78 d1t9ba1 c.31.1.3 (A:290-460) A 27.8 14 0.0011 14.0 4.1 19 99-117 27-45 (171) 79 d3buxb2 a.48.1.1 (B:48-177) N- 27.7 11 0.00079 14.8 1.3 61 245-314 65-130 (130) 80 d1ygpa_ c.87.1.4 (A:) Glycogen 27.3 15 0.0011 13.9 2.6 53 64-118 132-185 (876) 81 d1ovma1 c.31.1.3 (A:181-341) I 27.2 15 0.0011 13.9 5.7 35 276-310 32-66 (161) 82 d1ftra2 d.58.33.1 (A:149-296) 26.5 14 0.001 14.0 1.7 54 156-211 19-77 (148) 83 d2w6ka1 c.151.1.1 (A:1-139) Co 26.4 15 0.0011 13.8 5.7 50 60-120 21-74 (139) 84 d1tqya2 c.95.1.1 (A:219-423) A 25.1 16 0.0012 13.6 6.1 65 62-127 66-132 (205) 85 d2gupa1 c.55.1.10 (A:1-114) Hy 25.1 16 0.0012 13.6 6.1 96 6-126 1-107 (114) 86 d1m5sa2 d.58.33.1 (A:146-297) 24.9 16 0.0011 13.7 1.7 54 156-211 19-77 (152) 87 d1im4a_ e.8.1.7 (A:) DinB homo 24.7 15 0.0011 13.9 1.6 31 277-307 143-173 (209) 88 d2fsja1 c.55.1.12 (A:165-325) 24.5 17 0.0012 13.6 4.9 44 137-180 8-53 (161) 89 d1m5ha2 d.58.33.1 (A:146-297) 23.3 16 0.0012 13.6 1.5 55 156-212 19-78 (152) 90 d2gj4a1 c.87.1.4 (A:12-835) Gl 22.7 18 0.0013 13.3 1.7 52 63-117 93-146 (824) 91 d2a9va1 c.23.16.1 (A:1-196) GM 22.6 18 0.0013 13.3 3.0 41 78-118 40-80 (196) 92 d1pvda1 c.31.1.3 (A:182-360) P 21.5 19 0.0014 13.2 3.5 18 100-117 47-64 (179) 93 d1zeta2 e.8.1.7 (A:27-299) DNA 21.2 18 0.0013 13.3 1.5 48 252-307 150-197 (273) 94 d1f8ya_ c.23.14.1 (A:) Nucleos 20.7 9.4 0.00068 15.3 -0.1 51 97-158 91-141 (156) 95 d1gnla_ e.26.1.1 (A:) Hybrid c 20.5 20 0.0014 13.0 2.1 41 310-351 450-491 (543) 96 d1iiba_ c.44.2.1 (A:) Enzyme I 20.5 20 0.0014 13.0 4.3 15 288-302 16-30 (103) 97 d2grea2 c.56.5.4 (A:3-73,A:187 20.4 20 0.0014 13.0 1.7 38 280-318 148-186 (233) 98 d1jx4a2 e.8.1.7 (A:1-240) DinB 20.3 20 0.0014 13.0 2.2 29 277-305 138-166 (240) No 1 >d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Probab=100.00 E-value=1.5e-34 Score=255.28 Aligned_cols=178 Identities=16% Similarity=0.129 Sum_probs=152.7 Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCC Q ss_conf 79984399970687479998375643000223363002388889885288761035566655405733345861110688 Q gi|254781038|r 133 IAFPYLVLLVSGGHTQILLVRDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGT 212 (363) Q Consensus 133 ~~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~ 212 (363) .+||||.+.++|| |+++.|++..+|++||+|. +.|++|||++|+| ++||+||+|+++|++|+++.++||++.+.+ T Consensus 25 ~pfP~llv~iGsG-tsii~v~~~~~~~~iggT~--~gGgtf~gla~lL-lg~~~~~eI~klA~~G~~~~~dl~~~di~~- 99 (212) T d2i7na2 25 NPYPMLLVNMGSG-VSILAVYSKDNYKRVTGTS--LGGGTFLGLCCLL-TGCETFEEALEMAAKGDSTNVDKLVKDIYG- 99 (212) T ss_dssp SCCSEEEEEESSS-EEEEEEEETTEEEEEEEES--CSHHHHHHHHHHH-HCCCSHHHHHHHHHHCCGGGTSEEHHHHHS- T ss_pred CCCCEEEEECCCC-EEEEEEECCCCEEEECCCC--CCHHHHHHHHHHH-CCCCCHHHHHHHHHCCCCCCCCCCCCCCCC- T ss_conf 9987799997899-5999995598637816875--3088999999996-399998999999966996246762787678- Q ss_pred CCCCCCCHHHHHHHHHHHHH----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH Q ss_conf 75422102458999999851----12012106889999999999999999999999987621445523654133458799 Q gi|254781038|r 213 LCDFSFSGLKTSVQKTICAF----DVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHF 288 (363) Q Consensus 213 ~~dFSFSGLkTav~~~i~~~----~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~ 288 (363) +|||||||||++++..... +..++..++|+|+|||++|++.|..++.++...+ ++++++++|||++|+. T Consensus 100 -~~~s~sgL~t~~~a~~fgk~~~~~~~~~~~~~DiaaS~q~~v~~~l~~~a~~aa~~~------~~k~iv~~Ggv~aN~~ 172 (212) T d2i7na2 100 -GDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTITNNIGSIARMCALNE------NIDRVVFVGNFLRINM 172 (212) T ss_dssp -SCBGGGTBCTTSEEETTTTTTSHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------TCCCEEEESGGGCSSS T ss_pred -CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCEEEEECCHHHCHH T ss_conf -987855678899999731432101343489899999999999999999999999975------9998999772762789 Q ss_pred HHHHHHHHHHH----CCCEEEECCH-HHCCCHHHHHHHH Q ss_conf 99999999986----8988996287-8877258999999 Q gi|254781038|r 289 IRASLIDLCVL----HGFRFVAPPA-RLCTDNAVMIAWA 322 (363) Q Consensus 289 LR~~l~~~~~~----~~~~~~~P~~-~~ctDNAaMIA~a 322 (363) ||+++.+.+.+ .+++++||+- +|+++++|||+++ T Consensus 173 lr~~l~~~~~~~~~~~~i~~~Fp~~~~y~galGA~l~~~ 211 (212) T d2i7na2 173 VSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLELF 211 (212) T ss_dssp HHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHHT T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHC T ss_conf 999999999999860791698648745607999999754 No 2 >d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]} Probab=99.85 E-value=6.8e-22 Score=168.02 Aligned_cols=102 Identities=21% Similarity=0.375 Sum_probs=90.8 Q ss_pred EEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC Q ss_conf 88750260220778873388884189887311334621218714559999999969999999999838982245368740 Q gi|254781038|r 8 VIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVT 87 (363) Q Consensus 8 ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt 87 (363) ||+|||||+.+|+|+++ +++++.+.... .|.|.+.|.++++++|++++++++|||.|+|+ T Consensus 2 iLaIdTS~~~~sval~~----~~~i~~~~~~~----------------~~~h~~~l~~~i~~~l~~~~~~~~di~~i~v~ 61 (106) T d1okja1 2 ILAIDTATEACSVALWN----DGTVNAHFELC----------------PREHTQRILPMVQDILTTSGTSLTDINALAYG 61 (106) T ss_dssp EEEEECSSSEEEEEEEE----TTEEEEEEEEC----------------CSSTTTTHHHHHHHHHHHTTCCGGGCCEEEEE T ss_pred EEEEECCCCCEEEEEEE----CCEEEEEEEEC----------------CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE T ss_conf 99999777132999999----99999999975----------------58999999999999998608750025678885 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC Q ss_conf 664301256779999999887514864333036776530132 Q gi|254781038|r 88 AGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARL 129 (363) Q Consensus 88 ~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l 129 (363) .|||+|||||||+++||+|++++++|+++|||+++|+..++. T Consensus 62 ~GPGsfTglRig~s~akgla~~~~ip~~~v~sl~~la~~~~~ 103 (106) T d1okja1 62 RGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWR 103 (106) T ss_dssp EESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHH T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH T ss_conf 036765420599999999999829999986879999999898 No 3 >d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]} Probab=99.82 E-value=3.2e-20 Score=156.44 Aligned_cols=101 Identities=22% Similarity=0.422 Sum_probs=87.0 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) |.||+|||| +++++++.+. .++ .+..... .|.|.+.|+++++++|++++++++|||.|+ T Consensus 1 M~iLaidTS-~~~sval~~~----~~~-~~~~~~~---------------~~~hs~~l~~~i~~~l~~~~~~~~di~~i~ 59 (103) T d2a6aa1 1 MNVLALDTS-QRIRIGLRKG----EDL-FEISYTG---------------EKKHAEILPVVVKKLLDELDLKVKDLDVVG 59 (103) T ss_dssp CEEEEEECS-SSEEEEEEET----TEE-EEEEEES---------------CGGGGGHHHHHHHHHHHHHTCCGGGCSEEE T ss_pred CCEEEEECC-CCCEEEEEEC----CEE-EEEECCC---------------CHHHHHHHHHHHHHHHHHCCCCHHHHHHHH T ss_conf 959999937-6537999989----999-9996167---------------668999999999999998399989967776 Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC Q ss_conf 406643012567799999998875148643330367765301 Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363) Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363) |+.|||+|+|||||+++||+|++++++|++||||+++|+.+. T Consensus 60 v~~GPGsfTglRig~s~akgla~~~~ip~~gis~l~~lA~~~ 101 (103) T d2a6aa1 60 VGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNSFEMTAKSC 101 (103) T ss_dssp EECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECHHHHHHHTC T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHC T ss_conf 247887632089999999999998099999748799998738 No 4 >d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Probab=99.69 E-value=1.1e-14 Score=118.32 Aligned_cols=255 Identities=17% Similarity=0.178 Sum_probs=170.6 Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368 Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363) Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363) .|++||||--.-.|.+++++ .+++|+...+... +..|+ .+...+.+++++.+....+.... T Consensus 1 ~M~~lGIDiGGT~~k~~vvd---~~g~il~~~~~~t--------~~~~~--------~~~~~i~~~l~~~~~~~~~~~~~ 61 (259) T d1huxa_ 1 SIYTLGIDVGSTASKCIILK---DGKEIVAKSLVAV--------GTGTS--------GPARSISEVLENAHMKKEDMAFT 61 (259) T ss_dssp CCEEEEEEECSSEEEEEEEE---TTTEEEEEEEEEC--------CSSCC--------HHHHHHHHHHHHHTCCGGGCSEE T ss_pred CCEEEEEEECCCEEEEEEEC---CCCCEEEEEEECC--------CCCHH--------HHHHHHHHHHHHCCCCCCCCEEE T ss_conf 95899999172129999990---8990999999568--------99979--------99999999999725654442122 Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCC-CCEECCC Q ss_conf 740664301256779999999887514864333036776530132256799843999706874799983756-4300022 Q gi|254781038|r 85 AVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVA-HYDRLGT 163 (363) Q Consensus 85 avt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~-~~~ilg~ 163 (363) ....+++. ....+|...+||.++|++.+.+..+ .+...++..|+.+.++..++-. .....+. T Consensus 62 ~~~~~~~~---------------~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~g~~~~~~~~~ 124 (259) T d1huxa_ 62 LATGYGRN---------------SLEGIADKQMSELSCHAMGASFIWP--NVHTVIDIGGQDVKVIHVENGTMTNFQMND 124 (259) T ss_dssp EEESTTTT---------------TTTTTCSEEECHHHHHHHHHHHHCT--TCCEEEEEETTEEEEEEEETTEEEEEEEES T ss_pred ECCCCCCH---------------HHHHCCCCCCCCHHHHHHHHHHHCC--CCCEEEECCCCCCEEEEEECCCEEEEECCC T ss_conf 02454310---------------2331377665318999999998589--988787617878579999689689994476 Q ss_pred CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH Q ss_conf 33630023888898852887610355666554057333458611106887542210245899999985112012106889 Q gi|254781038|r 164 TIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCDFSFSGLKTSVQKTICAFDVLEKQDIADI 243 (363) Q Consensus 164 T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~dFSFSGLkTav~~~i~~~~~~~~~~~~di 243 (363) +.+...|.++++.++.++++.+ ++++++..++.. .+. .. ++.+|| ++.+.....+ .....++ T Consensus 125 ~~~~g~g~~~~~~~~~~~~~~~---e~~~l~~~~~~~-----~~~-~~--~~~~~~--~~~i~~~~~~-----~~~~~~i 186 (259) T d1huxa_ 125 KCAAGTGRFLDVMANILEVKVS---DLAELGAKSTKR-----VAI-SS--TCTVFA--ESEVISQLSK-----GTDKIDI 186 (259) T ss_dssp SCCTTSHHHHHHHHHHHTCCTT---THHHHHTTCCSC-----CCC-CC--CSHHHH--HHHHHHHHHT-----TCCHHHH T ss_pred CCCCCHHHHHHHHHHHCCCCHH---HHHHHHHCCCCC-----CCC-CC--CCCCHH--HHHHHHHHHC-----CCCHHHH T ss_conf 3587427899999998099978---999998548998-----666-88--765034--2677677667-----9848899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHH Q ss_conf 99999999999999999999998762144552365413345879999999999986898899628788772589999999 Q gi|254781038|r 244 CASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWAA 323 (363) Q Consensus 244 aasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag 323 (363) +......+...+...+.+. ..+..++++|||++|.++|+.+++.. +.+++.|+ +..|. .+|+.|- T Consensus 187 ~~~~~~~~~~~~~~~~~~~---------~~~~~Iv~gGGv~~~~~~~~~l~~~l---~~~i~~~~--~~~~a-gaiGAA~ 251 (259) T d1huxa_ 187 IAGIHRSVASRVIGLANRV---------GIVKDVVMTGGVAQNYGVRGALEEGL---GVEIKTSP--LAQYN-GALGAAL 251 (259) T ss_dssp HHHHHHHHHHHHHHHHHTT---------CCCSSEEEESGGGGCHHHHHHHHHHH---CSCEECCG--GGGGH-HHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHC---------CCCCCEEEECCCCCCHHHHHHHHHHH---CCCEECCC--CCCHH-HHHHHHH T ss_conf 9999999999999999851---------48996899755033499999999997---99787189--96387-9999999 Q ss_pred HHHHH Q ss_conf 99998 Q gi|254781038|r 324 LERME 328 (363) Q Consensus 324 ~~~~~ 328 (363) +-+-+ T Consensus 252 lA~~~ 256 (259) T d1huxa_ 252 YAYKK 256 (259) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 99987 No 5 >d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Probab=98.86 E-value=6.4e-07 Score=64.69 Aligned_cols=255 Identities=11% Similarity=0.052 Sum_probs=136.8 Q ss_pred EEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC Q ss_conf 87502602207788733888841898873113346212187145599999999699999999998389822453687406 Q gi|254781038|r 9 IGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTA 88 (363) Q Consensus 9 LgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~ 88 (363) +|||==--.+-++++ |++++++..... . + +..++ +.+.+ .+++.|+.+ T Consensus 3 iGIDiGGT~ik~~lv---d~~g~i~~~~~~----~---------------t---~~~i~-~~i~~-----~~~~~i~i~- 50 (267) T d2ewsa1 3 VGIDAGGTLIKIVQE---QDNQRTFKTELT----K---------------N---IDQVV-EWLNQ-----QQIEKLCLT- 50 (267) T ss_dssp EEEEECSSEEEEEEE---CSSCEEEEEEEG----G---------------G---HHHHH-HHHHT-----SCCSEEEEE- T ss_pred EEEEECHHHEEEEEE---ECCCCEEEEEEC----C---------------C---HHHHH-HHHHH-----HHHHHEEEE- T ss_conf 999977203888999---289968999863----5---------------4---89999-99997-----532234662- Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC----CCCCCCCCCCEEEEEECCCEEEEEECCCCCCEECCCC Q ss_conf 643012567799999998875148643330367765301----3225679984399970687479998375643000223 Q gi|254781038|r 89 GPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA----RLTDDIAFPYLVLLVSGGHTQILLVRDVAHYDRLGTT 164 (363) Q Consensus 89 gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~----~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~~ilg~T 164 (363) |||.. .+...+..|..-++....+.... ........|+ .+...+....+....+......+|.. T Consensus 51 g~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~g 118 (267) T d2ewsa1 51 GGNAG-----------VIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADY-IFANVGTGTSLHYFDGQSQRRVGGIG 118 (267) T ss_dssp STTHH-----------HHHTTSSSCCEECCHHHHHHHHHHHHHHHTTCCCSCE-EEEEESSSEEEEEECSSCEEEEEEES T ss_pred CCCCC-----------CCCHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCH-HHHHCCCCEEEECCCCCEEEEECCCC T ss_conf 34454-----------3013225166543228888877665665447753000-87753652488635674167630333 Q ss_pred CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCC-CCCCCHHHHHHHHHHHHHCCCCCCCHHHH Q ss_conf 36300238888988528876103556665540573334586111068875-42210245899999985112012106889 Q gi|254781038|r 165 IDDALGECFDKIAKSLGLPYPGGVEIEKAALMGDGKRFKFPCPLVQGTLC-DFSFSGLKTSVQKTICAFDVLEKQDIADI 243 (363) Q Consensus 165 ~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~-dFSFSGLkTav~~~i~~~~~~~~~~~~di 243 (363) ...|-.+++.+..++.+.++ ++-.++..++........+....... ...++........ ............++ T Consensus 119 --~G~g~~~~~~~~~~~~~~~g--e~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 192 (267) T d2ewsa1 119 --TGGGMIQGLGYLLSQITDYK--QLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGH--VLHHLDADFTPSNK 192 (267) T ss_dssp --CSHHHHHHHHHHHHCCCCHH--HHHHHHTTCCCTTTCEETTTC-------CCTTSEEETTTT--GGGCTTSCCCHHHH T ss_pred --CCCCEEHHHHHHHCCCCCHH--HHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCC--HHHHHHHHCCHHHH T ss_conf --00213213477735999726--7777530477753444420231587755302211222101--01323442022056 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH-HHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHH Q ss_conf 9999999999999999999999876214455236541334-587999999999998689889962878877258999999 Q gi|254781038|r 244 CASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGV-ASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWA 322 (363) Q Consensus 244 aasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGV-aaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~a 322 (363) +++.++.+.+.|...+......+ ++..+|+.||| ++|..||+.+++..++++.+++||+. .|++.+|+.+ T Consensus 193 a~~~~~~~~~~l~~~~~~~~~~~------~~~~Iv~~GG~~~~~~~l~~~i~~~~~~~~~~i~~~~~---~~~aGaiGA~ 263 (267) T d2ewsa1 193 LAAVIGVVGEVVTTMAITVAREF------KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVEN---GAFSGAIGAL 263 (267) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT------TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTT---GGGHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHHHHHC------CCCCEEEECCHHHCCHHHHHHHHHHHHHCCCEEEECCC---CCHHHHHHHH T ss_conf 79999999999999999887614------99989998970543799999999999768988997798---2399999899 No 6 >d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Probab=96.06 E-value=0.052 Score=30.84 Aligned_cols=58 Identities=19% Similarity=0.175 Sum_probs=36.6 Q ss_pred CCCEEEEEHHHHHHHHH----HHHHHHHHHHCCCEEEECCHHHCC--CHHHHHHHHHHHHHHCC Q ss_conf 55236541334587999----999999998689889962878877--25899999999999849 Q gi|254781038|r 273 KQAVLVVSGGVASNHFI----RASLIDLCVLHGFRFVAPPARLCT--DNAVMIAWAALERMEAG 330 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~L----R~~l~~~~~~~~~~~~~P~~~~ct--DNAaMIA~ag~~~~~~g 330 (363) ++..+|++||++.+..+ ++.+.+.+........-|....|. |+|..++.+.+..-+++ T Consensus 110 dp~~IvlGG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~s~~~~~a~l~GAa~l~l~~~k 173 (175) T d2gupa2 110 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQEEK 173 (175) T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHHHTT T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHC T ss_conf 4766998783024599999999999999864545678988998787996989999999999740 No 7 >d2p3ra2 c.55.1.4 (A:254-500) Glycerol kinase {Escherichia coli [TaxId: 562]} Probab=95.19 E-value=0.11 Score=28.69 Aligned_cols=140 Identities=17% Similarity=0.164 Sum_probs=80.1 Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC--CCCCCCCC------HHCCCCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 233630023888898852887610355666554057--33345861------1106887542210245899999985112 Q gi|254781038|r 163 TTIDDALGECFDKIAKSLGLPYPGGVEIEKAALMGD--GKRFKFPC------PLVQGTLCDFSFSGLKTSVQKTICAFDV 234 (363) Q Consensus 163 ~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~g~--~~~~~~P~------p~~~~~~~dFSFSGLkTav~~~i~~~~~ 234 (363) +..--++|.+++-....++..-. -...+..+.... ..-+-+|. |.-+ ....=+|.||... T Consensus 50 ~g~~~~~g~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~gl~flP~l~G~~~P~~~-~~arg~~~Gl~~~---------- 117 (247) T d2p3ra2 50 EGAVFMAGASIQWLRDEMKLIND-AYDSEYFATKVQNTNGVYVVPAFTGLGAPYWD-PYARGAIFGLTRG---------- 117 (247) T ss_dssp EEEESCSHHHHHHHHHTSCCCCS-SSCHHHHHTTSSSCTTCEEECCTTCCBTTTCC-TTCCEEEEEECTT---------- T ss_pred HHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHCCCCCCCCEEEEECCHHHCCCCCC-CCCCCEEEECCCC---------- T ss_conf 66798888999999985012202-56665432037997616887021100454568-7645157613556---------- Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHH-HCC Q ss_conf 0121068899999999999999999999999876214455236541334587999999999998689889962878-877 Q gi|254781038|r 235 LEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPAR-LCT 313 (363) Q Consensus 235 ~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~-~ct 313 (363) -.+.+|..++.+.|.=.+..-++ ..++.....++.+.++||.+.|..+++.+.++. |.++..|... .+. T Consensus 118 ---~~~~~i~RAvlEgiaf~~~~~~~----~~~~~~g~~~~~i~v~GG~s~s~~~~Qi~Adv~---g~~v~~~~~~e~~a 187 (247) T d2p3ra2 118 ---VNANHIIRATLESIAYQTRDVLE----AMQADSGIRLHALRVDGGAVANNFLMQFQSDIL---GTRVERPEVREVTA 187 (247) T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESCCCHHH T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHH----HHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHC---CCEEEECCCCCCCH T ss_conf ---68999999999999999999997----540114776203575077522779885777725---96489347655328 Q ss_pred CHHHHHHHHHH Q ss_conf 25899999999 Q gi|254781038|r 314 DNAVMIAWAAL 324 (363) Q Consensus 314 DNAaMIA~ag~ 324 (363) =-|||.|..+. T Consensus 188 ~GaA~~aa~~~ 198 (247) T d2p3ra2 188 LGAAYLAGLAV 198 (247) T ss_dssp HHHHHHHHHHH T ss_pred HHHHHHHHHHC T ss_conf 99999999970 No 8 >d2p3ra1 c.55.1.4 (A:2-253) Glycerol kinase {Escherichia coli [TaxId: 562]} Probab=94.75 E-value=0.089 Score=29.21 Aligned_cols=81 Identities=14% Similarity=0.154 Sum_probs=53.1 Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 846887502602207788733888841898873113346212187--145599999999699999999998389822453 Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGG--VVPEVAARAHVDVLDILIKQTLLRANMQISDMD 82 (363) Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GG--v~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id 82 (363) |++|||||-..-.+-++++ |.++++++...........+-|. ..|+. =-+.+..++.+++++++....+|. T Consensus 2 kky~lgiDiGTssvKa~l~---d~~g~~~~~~~~~~~~~~~~~g~~E~d~~~----~~~~~~~~~~~~~~~~~~~~~~i~ 74 (252) T d2p3ra1 2 KKYIVALDQGTTSSRAVVM---DHDANIISVSQREFEQIYPKPGWVEHDPME----IWATQSSTLVEVLAKADISSDQIA 74 (252) T ss_dssp CCEEEEEEECSSEEEEEEE---CTTCCEEEEEEEECCCBCSSTTCCEECHHH----HHHHHHHHHHHHHHHTTCCGGGEE T ss_pred CEEEEEEEECCCCEEEEEE---ECCCCEEEEEEEECCCCCCCCCCEEECHHH----HHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 7499999820234565589---298989999986177255899817989999----999999998877765112446650 Q ss_pred EEEEC-CCCCH Q ss_conf 68740-66430 Q gi|254781038|r 83 SIAVT-AGPGL 92 (363) Q Consensus 83 ~Iavt-~gPG~ 92 (363) +|++| .+.|. T Consensus 75 ~Igit~~~~~~ 85 (252) T d2p3ra1 75 AIGITNQRETT 85 (252) T ss_dssp EEEEEECSSCB T ss_pred EEEEECCCCEE T ss_conf 89995788629 No 9 >d1hjra_ c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId: 562]} Probab=94.74 E-value=0.14 Score=27.88 Aligned_cols=101 Identities=10% Similarity=0.159 Sum_probs=54.4 Q ss_pred EEEEEECCCHHHEEEEEECCCCCCEEEEE-EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 68875026022077887338888418988-73113346212187145599999999699999999998389822453687 Q gi|254781038|r 7 TVIGIETSCDETAVAVVRRKDSHGEILAE-AVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 7 ~ILgIETScd~tsvaiv~~~~~~~~il~~-~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) +|||||-+-..|+.|+++.++...+++.. .+.+..+. .. +....|..-+.+.+++.+.+.--+..+- T Consensus 2 iILGIDPGl~~~G~avid~~~~~~~~v~~g~i~t~~~~----------~~--~Rl~~i~~~l~~li~~~~Pd~vaiE~~f 69 (158) T d1hjra_ 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDD----------LP--SRLKLIYAGVTEIITQFQPDYFAIEQVF 69 (158) T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSC----------HH--HHHHHHHHHHHHHHHHHCCSEEEEEECC T ss_pred EEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCC----------HH--HHHHHHHHHHHHHHHCCCCCEEEEEEEH T ss_conf 89998367786589999964987899995279679987----------69--9999999999999853499878987400 Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH Q ss_conf 4066430125677999999988751486433303 Q gi|254781038|r 86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINH 119 (363) Q Consensus 86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH 119 (363) +...+-..-.|---.......++..++|+..+.- T Consensus 70 ~~~n~~sa~~l~~arG~i~l~a~~~~ipi~e~~P 103 (158) T d1hjra_ 70 MAKNADSALKLGQARGVAIVAAVNQELPVFEYAA 103 (158) T ss_dssp CCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEH T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCH T ss_conf 0248899999999999999999980865012441 No 10 >d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Probab=94.07 E-value=0.14 Score=27.85 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=50.9 Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368 Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363) Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363) .+++||||----.|-++|+ |.++++++..... .-.++.-..+-.+.+...++++++++++...++..+ T Consensus 3 m~y~lGID~GGT~tk~~l~---d~~G~il~~~~~~---------~~~~~~~~~~~~~~i~~~i~~~~~~ag~~~~~~~~~ 70 (114) T d1zc6a1 3 IRYLIGVDGGGTGTRIRLH---ASDGTPLAMAEGG---------ASALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASAC 70 (114) T ss_dssp CCEEEEEEECSSCEEEEEE---ETTCCEEEEEEES---------CCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGE T ss_pred CCEEEEEECCCCEEEEEEE---CCCCCEEEEEECC---------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCEE T ss_conf 6689999847010899999---4999899999726---------887334999999999999999999829983221024 Q ss_pred EECCC Q ss_conf 74066 Q gi|254781038|r 85 AVTAG 89 (363) Q Consensus 85 avt~g 89 (363) .+..| T Consensus 71 ~~~~g 75 (114) T d1zc6a1 71 AIGLG 75 (114) T ss_dssp EEEEE T ss_pred EEEEE T ss_conf 99998 No 11 >d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Probab=93.92 E-value=0.13 Score=28.08 Aligned_cols=109 Identities=20% Similarity=0.249 Sum_probs=74.0 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) .++||||=+.+...++++ |.+++++........... .| ..-.+.+..++++.++..+....++.+|+ T Consensus 4 ~~~igidig~~~i~~~l~---d~~G~il~~~~~~~~~~~------~~----~~~~~~i~~~i~~~~~~~~~~~~~i~gig 70 (128) T d2hoea3 4 AYVLGIEVTRDEIAACLI---DASMNILAHEAHPLPSQS------DR----EETLNVMYRIIDRAKDMMEKLGSKLSALT 70 (128) T ss_dssp CEEEEEEECSSEEEEEEE---ETTCCEEEEEEEECCSSC------CH----HHHHHHHHHHHHHHHHHHHHTTCCCCEEE T ss_pred EEEEEEEECCCEEEEEEE---CCCCCEEEEEEEECCCCC------CH----HHHHHHHHHHHHHHHHHHCCCCCCEEEEE T ss_conf 799999999999999999---599989999988514578------98----99999999999999997142468557985 Q ss_pred ECC-CC-----CHH---HHH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC Q ss_conf 406-64-----301---256-7799999998875148643330367765301 Q gi|254781038|r 86 VTA-GP-----GLM---GGL-IVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363) Q Consensus 86 vt~-gP-----G~~---~~L-~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363) ++. || |.. +-| .-++...+.|...+++|++=-|...+.+++= T Consensus 71 i~~pG~vd~~~g~i~~~~~l~w~~~~l~~~l~~~~~~pv~i~NDa~~~alaE 122 (128) T d2hoea3 71 VAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGE 122 (128) T ss_dssp EEESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHH T ss_pred CCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHH T ss_conf 1405118488898985122222488669999987299899984888999999 No 12 >d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Probab=92.97 E-value=0.18 Score=27.11 Aligned_cols=105 Identities=18% Similarity=0.238 Sum_probs=73.3 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) ..+||||=+-+..+++++ |.+++++.+...+... .. | ..-.+.+..++++.+.+.+.+..++-+|+ T Consensus 4 ~~~lgi~ig~~~i~~~l~---d~~G~il~~~~~~~~~-~~------~----~~~~~~i~~~i~~~~~~~~~~~~~i~gIg 69 (128) T d1z05a3 4 WQFLSMRLGRGYLTIALH---ELGGEVLIDTKIDIHE-ID------Q----DDVLARLLFEIEEFFQTYAAQLDRVTSIA 69 (128) T ss_dssp EEEEEEEEETTEEEEEEE---ETTSCEEEEEEEECCC-CB------H----HHHHHHHHHHHHHHHHHTTTTCCEEEEEE T ss_pred CEEEEEEECCCEEEEEEE---CCCCCEEEEEEECCCC-CC------H----HHHHHHHHHHHHHHHHHCCCCCCCCEEEE T ss_conf 899999989999999999---5989999999721346-89------8----99999999999999997432446615787 Q ss_pred ECCCCCHHH----------HH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHH Q ss_conf 406643012----------56-77999999988751486433303677653 Q gi|254781038|r 86 VTAGPGLMG----------GL-IVGLMTAKAISYVSHKPFYAINHLEGHIL 125 (363) Q Consensus 86 vt~gPG~~~----------~L-~vG~~~Ak~la~~~~~Pli~VnH~~aH~~ 125 (363) ++. ||..- .+ ..+...++-|...+++|++=.|...+=++ T Consensus 70 i~~-pG~vd~~~~~~~~~~~~~~~~~~l~~~l~~~~~~PV~l~NDana~a~ 119 (128) T d1z05a3 70 ITL-PGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWAL 119 (128) T ss_dssp EEE-SSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHH T ss_pred EEE-EEEEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHH T ss_conf 621-00140221042011257878863689999851998999866889999 No 13 >d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Probab=92.18 E-value=0.36 Score=25.00 Aligned_cols=143 Identities=13% Similarity=0.109 Sum_probs=67.6 Q ss_pred CEEEEEECCCEEEEEECCC-CCCEECCCCCC-CCHHHHHHHHHH-HC--------CCCCCHHHH-HHHH---HH------ Q ss_conf 4399970687479998375-64300022336-300238888988-52--------887610355-6665---54------ Q gi|254781038|r 137 YLVLLVSGGHTQILLVRDV-AHYDRLGTTID-DALGECFDKIAK-SL--------GLPYPGGVE-IEKA---AL------ 195 (363) Q Consensus 137 fL~LlvSGGhT~l~~~~~~-~~~~ilg~T~D-da~Ge~~DK~ar-~L--------gl~yPgGp~-ie~~---A~------ 195 (363) .|.+=+-||+|++-+++-. ..+++++..-| .--|+.||+.-. .+ +.+.+-.+. ..++ ++ T Consensus 7 VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l 86 (193) T d1bupa2 7 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 86 (193) T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHH T ss_pred EEEEEECCCEEEEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 99999289919999999819889999853887766568999999999999999818888629999999999999985524 Q ss_pred HCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 05733345861110688754221024589999998511201210688999999999999999999999998762144552 Q gi|254781038|r 196 MGDGKRFKFPCPLVQGTLCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQA 275 (363) Q Consensus 196 ~g~~~~~~~P~p~~~~~~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~ 275 (363) ..+ ....+..+... .+.+++.+ ...++...++..+-+.+.+.+ ++++.... .....+. T Consensus 87 s~~-~~~~~~~~~~~-~~~~~~~~---------------itr~~~e~~~~~~~~~~~~~i----~~~l~~~~-~~~~~i~ 144 (193) T d1bupa2 87 SSS-TQASIEIDSLY-EGIDFYTS---------------ITRARFEELNADLFRGTLDPV----EKALRDAK-LDKSQIH 144 (193) T ss_dssp TTS-SEEEEEEEEEE-TTEEEEEE---------------EEHHHHHHHTHHHHHHTHHHH----HHHHHHHT-CCGGGCC T ss_pred CCC-CEEEEEEECCC-CCCCCCEE---------------ECHHHHHHHHHHHHHHHHHHH----HHHHHHCC-CCHHHCC T ss_conf 898-64899974355-79865448---------------749999999889999999999----99999849-9977897 Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCC Q ss_conf 36541334587999999999998689 Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHG 301 (363) Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~ 301 (363) .++++||-+...++|+.+++...... T Consensus 145 ~V~lvGG~sr~p~v~~~i~~~f~~~~ 170 (193) T d1bupa2 145 DIVLVGGSTRIPKIQKLLQDFFNGKE 170 (193) T ss_dssp EEEEESGGGGCHHHHHHHHHHTTTCC T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCC T ss_conf 89998882342999999999819998 No 14 >d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Probab=92.09 E-value=0.37 Score=24.93 Aligned_cols=106 Identities=18% Similarity=0.223 Sum_probs=61.4 Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCC-CCC Q ss_conf 884688750260220778873388884189887311334621218714559999-999969999999999838982-245 Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAAR-AHVDVLDILIKQTLLRANMQI-SDM 81 (363) Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~-~H~~~l~~li~~~l~~a~~~~-~~i 81 (363) |..+.||||.=.-.|-+.|+ |.++++++.... |+..|..... .-.++|..++++++++++++. .++ T Consensus 1 m~~~~~GIDgGGTkT~~~l~---d~~G~~l~~~~~---------g~~N~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~i 68 (117) T d2ch5a2 1 MAAIYGGVEGGGTRSEVLLV---SEDGKILAEADG---------LSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPL 68 (117) T ss_dssp SSCEEEEEEECTTCEEEEEE---ETTSCEEEEEEE---------CCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCB T ss_pred CCCEEEEEECCHHHEEEEEE---CCCCCEEEEEEC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 98589999848025799999---899999999975---------788731100899999999999999987168877550 Q ss_pred CEEEECCCCCHHHHH--HHHHHHHHHHHHHH---CCCCCCCHHHHHHHH Q ss_conf 368740664301256--77999999988751---486433303677653 Q gi|254781038|r 82 DSIAVTAGPGLMGGL--IVGLMTAKAISYVS---HKPFYAINHLEGHIL 125 (363) Q Consensus 82 d~Iavt~gPG~~~~L--~vG~~~Ak~la~~~---~~Pli~VnH~~aH~~ 125 (363) ..+.+. +.++= .---...+.|...+ ...++=+|-.++=++ T Consensus 69 ~~i~~G----lAG~~~~~~~~~l~~~l~~~~~~~~~~v~v~nDa~~Al~ 113 (117) T d2ch5a2 69 RSLGLS----LSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIA 113 (117) T ss_dssp SEEEEE----ETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHH T ss_pred CEEEEE----EECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH T ss_conf 389999----633686046899999999877898852999660899876 No 15 >d1saza2 c.55.1.2 (A:173-375) butyrate kinase 2 {Thermotoga maritima [TaxId: 2336]} Probab=91.88 E-value=0.39 Score=24.78 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=48.9 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH-HHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHHHHHHC Q ss_conf 9999999999999998762144552365413345879-999999999986898899628788772589999999999984 Q gi|254781038|r 251 VVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNH-FIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWAALERMEA 329 (363) Q Consensus 251 i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~-~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag~~~~~~ 329 (363) +++..+.++.+.+-.+-.....++..+|+.||++-|+ ++|+++.+.++-.+.-.++|- +|---+||.-++. ... T Consensus 101 A~d~~~y~i~K~Iga~~a~L~G~vDaIvfTgGIgen~~~vr~~I~~~l~~lgpv~v~Pg----~nE~~ala~~alr-vl~ 175 (203) T d1saza2 101 VYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPG----SNEEKALALSALR-VLR 175 (203) T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEB----CCHHHHHHHHHHH-HHT T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECC----CCHHHHHHHHHHH-HHC T ss_conf 99999999999999999971898788998783332719999999974112043798569----7889999999999-865 Q ss_pred CC Q ss_conf 99 Q gi|254781038|r 330 GL 331 (363) Q Consensus 330 g~ 331 (363) |. T Consensus 176 ge 177 (203) T d1saza2 176 GE 177 (203) T ss_dssp TS T ss_pred CC T ss_conf 84 No 16 >d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]} Probab=91.65 E-value=0.29 Score=25.72 Aligned_cols=106 Identities=17% Similarity=0.221 Sum_probs=75.2 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) -.+||||=+-+..+++++ |.+|+++.+........ .|+ .-.+.+...+++.+.+.+.+..++-+|+ T Consensus 4 ~~~l~i~i~~~~i~~~l~---Dl~G~~l~~~~~~~~~~-------~~~----~~~~~l~~~i~~~l~~~~~~~~~i~gIg 69 (129) T d1z6ra2 4 WHYLSLRISRGEIFLALR---DLSSKLVVEESQELALK-------DDL----PLLDRIISHIDQFFIRHQKKLERLTSIA 69 (129) T ss_dssp CEEEEEEEETTEEEEEEE---ETTCCEEEEEEEECCSS-------CSS----CHHHHHHHHHHHHHHHTGGGCCCEEEEE T ss_pred EEEEEEEECCCEEEEEEE---CCCCCEEEEEEEECCCC-------CHH----HHHHHHHHHHHHHHHHCCCCCCCCEEEE T ss_conf 599999989999999999---59999887877402455-------446----8999999999999985375433303688 Q ss_pred ECCCCCHH----------HHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHC Q ss_conf 40664301----------256--779999999887514864333036776530 Q gi|254781038|r 86 VTAGPGLM----------GGL--IVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363) Q Consensus 86 vt~gPG~~----------~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363) ++. ||.+ +-+ .-++...+-|...+++|++=.|...+=+++ T Consensus 70 i~~-pG~v~~~~~~~~~~~~~~~w~~~~l~~~l~~~~~~pV~~~NDa~a~ala 121 (129) T d1z6ra2 70 ITL-PGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMA 121 (129) T ss_dssp EEE-SSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHH T ss_pred EEE-EEEEEECCCCEECCCCCHHCCCCCHHHHHHHHCCCCEEEEEHHHHHHHH T ss_conf 733-1126640460304676111058336999998619989998648899999 No 17 >d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Probab=91.55 E-value=0.42 Score=24.58 Aligned_cols=53 Identities=8% Similarity=-0.052 Sum_probs=35.8 Q ss_pred CCCEEEEEHHHH-HHHHHHHHHHHHHHHCCCEEEECCHHHC--CCHHHHHHHHHHH Q ss_conf 552365413345-8799999999999868988996287887--7258999999999 Q gi|254781038|r 273 KQAVLVVSGGVA-SNHFIRASLIDLCVLHGFRFVAPPARLC--TDNAVMIAWAALE 325 (363) Q Consensus 273 ~~~~lvv~GGVa-aN~~LR~~l~~~~~~~~~~~~~P~~~~c--tDNAaMIA~ag~~ 325 (363) ++..+|++|+++ .+..+.+.+++..+++...-.-|+...+ .|++..++.+.+- T Consensus 103 dPe~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 158 (169) T d2hoea2 103 GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHA 158 (169) T ss_dssp CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHH T ss_pred CCCEEEEECHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHH T ss_conf 78879996867755299999999999972677789879988989989999999999 No 18 >d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Probab=90.85 E-value=0.49 Score=24.09 Aligned_cols=100 Identities=16% Similarity=0.258 Sum_probs=62.3 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) |.+||||=---.+.++++ |.+++++..........+. .+.+...+.+.+++. ..++..|+ T Consensus 1 M~~lgiDiGgT~i~~~l~---d~~G~i~~~~~~~~~~~~~--------------~~~~~~~i~~~i~~~---~~~~~~ig 60 (119) T d2aa4a1 1 MTTLAIDIGGTKLAAALI---GADGQIRDRRELPTPASQT--------------PEALRDALSALVSPL---QAHAQRVA 60 (119) T ss_dssp CCEEEEEECSSEEEEEEE---CTTCCEEEEEEEECCSSCC--------------HHHHHHHHHHHHTTT---GGGCSEEE T ss_pred CEEEEEEECCCEEEEEEE---CCCCCEEEEEEEECCCCCC--------------HHHHHHHHHHHHHHH---HCCCCEEE T ss_conf 909999968687999999---4999898767770366676--------------889999999999975---33476389 Q ss_pred ECCCCCHH----------HHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHC Q ss_conf 40664301----------256--779999999887514864333036776530 Q gi|254781038|r 86 VTAGPGLM----------GGL--IVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363) Q Consensus 86 vt~gPG~~----------~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363) ++. ||.. +.| ..+...++.|...+++|++=.|-..+.++. T Consensus 61 I~~-pG~v~~~~~~~~~~~~l~~w~~~~l~~~l~~~~~~pv~i~NDanaaalg 112 (119) T d2aa4a1 61 IAS-TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWA 112 (119) T ss_dssp EEE-SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHH T ss_pred EEE-EEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHH T ss_conf 984-3267399868972675443569978999999869999998458879999 No 19 >d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Probab=90.72 E-value=0.51 Score=24.01 Aligned_cols=146 Identities=17% Similarity=0.165 Sum_probs=80.5 Q ss_pred CEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH--CCCCCCCCCC------HHCCCCCCCCCCCHHHHHHHHHH Q ss_conf 300022336300238888988528876103556665540--5733345861------11068875422102458999999 Q gi|254781038|r 158 YDRLGTTIDDALGECFDKIAKSLGLPYPGGVEIEKAALM--GDGKRFKFPC------PLVQGTLCDFSFSGLKTSVQKTI 229 (363) Q Consensus 158 ~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp~ie~~A~~--g~~~~~~~P~------p~~~~~~~dFSFSGLkTav~~~i 229 (363) |-+-|.+ -..|.+++-.-+.++.. +-....+..+.. ++..-+-+|. |.-+ .+..=+|.||... T Consensus 45 y~~eg~~--~~~G~~~~Wl~~~~~~~-~~~~~~~~~~~~~~~~~g~~flP~~~G~~~P~~~-~~arg~~~Gl~~~----- 115 (235) T d1r59o2 45 YALEGSI--FVAGSAIQWLRDGLRMI-ETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWD-SEARGAVFGLTRG----- 115 (235) T ss_dssp EEEECCC--SCSSHHHHHTTTTSCSS-SSGGGGTTTTSSSSSCSSCEEECCTTCCCTTTCC-SSCCCEEESCCTT----- T ss_pred EEEHHHH--HHHHHHHHHHHHHHHCC-CCHHHHCCCCCCCCCCCCCEEEEHHHHCCCCCCC-CCCCEEEEECCCC----- T ss_conf 8708888--87778999987654025-4223310110135777763453123320443357-7765068634667----- Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCH Q ss_conf 85112012106889999999999999999999999987621445523654133458799999999999868988996287 Q gi|254781038|r 230 CAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPA 309 (363) Q Consensus 230 ~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~ 309 (363) -++.+|+.+..+.|.=.+..-++ ..++.....++.+.++||.+.|..+++.+.+.. +.++..+.. T Consensus 116 --------~~~~~l~rAvlEgiaf~~~~~~e----~~~~~~g~~~~~i~~~GG~s~s~~~~Qi~Advl---g~~v~~~~~ 180 (235) T d1r59o2 116 --------TTKEDFVRATLQAVAYQSKDVID----TMKKDSGIDIPLLKVDGGAAKNDLLMQFQADIL---DIDVQRAAN 180 (235) T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCSEEEEEESTTSCHHHHHHHHHHH---SSEEEEESC T ss_pred --------CCHHHHHHHHHHHHHHHHHHHHH----HHHHHCCCCCCEEEECCCCHHCHHHHHHHHHCC---CEEEEECCC T ss_conf --------99999999999999999999999----999961999727996376202889972212221---023332134 Q ss_pred H-HCCCHHHHHHHHHHHHH Q ss_conf 8-87725899999999999 Q gi|254781038|r 310 R-LCTDNAVMIAWAALERM 327 (363) Q Consensus 310 ~-~ctDNAaMIA~ag~~~~ 327 (363) . -..=-|||+|..+.-.| T Consensus 181 ~e~~alGaA~la~~~~G~~ 199 (235) T d1r59o2 181 LETTALGAAYLAGLAVGFW 199 (235) T ss_dssp CCTTTHHHHHHHHHHHTSS T ss_pred CCHHHHHHHHHHHHHCCCC T ss_conf 1127899999999981888 No 20 >d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Probab=89.90 E-value=0.59 Score=23.55 Aligned_cols=50 Identities=12% Similarity=0.177 Sum_probs=33.5 Q ss_pred CCCEEEEEHHHHH-HHHHHHHHHHHHHHC-------CCEEEECCHHHCCCHHHHHHHHHHH Q ss_conf 5523654133458-799999999999868-------9889962878877258999999999 Q gi|254781038|r 273 KQAVLVVSGGVAS-NHFIRASLIDLCVLH-------GFRFVAPPARLCTDNAVMIAWAALE 325 (363) Q Consensus 273 ~~~~lvv~GGVaa-N~~LR~~l~~~~~~~-------~~~~~~P~~~~ctDNAaMIA~ag~~ 325 (363) ++..+|++||++. +..+.+.+++..+++ ..++... --.|+|..++.|-+. T Consensus 125 dP~~IviGG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~I~~s---~lg~~a~~~GAA~l~ 182 (197) T d1z05a2 125 NPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVES---RFYKQATMPGAALIK 182 (197) T ss_dssp CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEEC---SCSSCTTHHHHHHHH T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC---CCCCCHHHHHHHHHH T ss_conf 8988999342677368999999999998534002789889988---978808899999999 No 21 >d2e1za2 c.55.1.2 (A:193-397) Propionate kinase {Salmonella typhimurium [TaxId: 90371]} Probab=87.97 E-value=0.37 Score=24.93 Aligned_cols=76 Identities=18% Similarity=0.337 Sum_probs=47.5 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH-HHHHHHHHHHHHCCCE---------------EEECC-H---- Q ss_conf 9999999999999998762144552365413345879-9999999999868988---------------99628-7---- Q gi|254781038|r 251 VVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNH-FIRASLIDLCVLHGFR---------------FVAPP-A---- 309 (363) Q Consensus 251 i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~-~LR~~l~~~~~~~~~~---------------~~~P~-~---- 309 (363) +++..+.++.+.+-.+-... .++..+|+.||++-|+ .+|+++-+-++-.|+. ..-++ - T Consensus 104 a~d~~~yri~k~Iga~~a~L-ggvDaiVFTgGIGEn~~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~~~Is~~~S~v~v 182 (205) T d2e1za2 104 AIKTFVHRIARHIAGHAASL-HRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVIC 182 (205) T ss_dssp HHHHHHHHHHHHHHHHHTTC-SSCCEEEEEHHHHHHCHHHHHHHHHTTGGGTCCBCHHHHHSCGGGCSEECBCTTCSSEE T ss_pred HHHHHHHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCEEECHHHHHCCCCCCCCEECCCCCCCEE T ss_conf 99999999999998777864-69998998074233648899999977666144877423001278998877389997569 Q ss_pred -HHCCCHHHHHHHHHHHHH Q ss_conf -887725899999999999 Q gi|254781038|r 310 -RLCTDNAVMIAWAALERM 327 (363) Q Consensus 310 -~~ctDNAaMIA~ag~~~~ 327 (363) -.-||--.|||.-.++.. T Consensus 183 ~VipTnEE~~IA~~~~~l~ 201 (205) T d2e1za2 183 AVIPTNEEKMIALDAIHLG 201 (205) T ss_dssp EECCCCHHHHHHHHHHHHT T ss_pred EEECCCHHHHHHHHHHHHH T ss_conf 9988988999999999987 No 22 >d1xc3a2 c.55.1.10 (A:119-294) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} Probab=84.69 E-value=1.2 Score=21.53 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=31.4 Q ss_pred CCCEEEEEHHHHHHHHH----HHHHHHHHHHCCCEEEEC------CHHHC--CCHHHHHHHHHH--HHHH Q ss_conf 55236541334587999----999999998689889962------87887--725899999999--9998 Q gi|254781038|r 273 KQAVLVVSGGVASNHFI----RASLIDLCVLHGFRFVAP------PARLC--TDNAVMIAWAAL--ERME 328 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~L----R~~l~~~~~~~~~~~~~P------~~~~c--tDNAaMIA~ag~--~~~~ 328 (363) ++..+|++|||+.+..| ++.+.+....+ .....+ +...| .|+|.+++.+.+ ++++ T Consensus 103 dP~~IviGGgi~~~~~l~~~i~~~l~~~~~~~-~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~la~~~l~ 171 (176) T d1xc3a2 103 APKKIILGGGVMQQKQVFSYIYQYVPKIMNSY-LDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQALQ 171 (176) T ss_dssp CCSCEEEESGGGGSTHHHHHHHHHHHHHHTTS-SCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHHHHH T ss_pred CCCEEEECCHHHCCHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH T ss_conf 99889991745343768999999999999875-3002245567986996787882999999999999986 No 23 >d1g99a2 c.55.1.2 (A:198-398) Acetate kinase {Archaeon Methanosarcina thermophila [TaxId: 2210]} Probab=81.92 E-value=0.79 Score=22.65 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=31.4 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH-HHHHHHHHHHHCCC Q ss_conf 9999999999999987621445523654133458799-99999999986898 Q gi|254781038|r 252 VRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHF-IRASLIDLCVLHGF 302 (363) Q Consensus 252 ~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~-LR~~l~~~~~~~~~ 302 (363) ++..+.++.+.+-.+-... .++..+|+.||++-|+. +|+++-+-++-.|+ T Consensus 105 ~d~~~yri~k~Iga~~a~L-ggvDaiVfTGGigen~~~vR~~i~~~l~~lGi 155 (201) T d1g99a2 105 LEIFAYKVKKFIGEYSAVL-NGADAVVFTAGIGENSASIRKRILTGLDGIGI 155 (201) T ss_dssp HHHHHHHHHHHHHHHHHHT-TSCSEEEEEHHHHHHCHHHHHHHHTTCGGGTC T ss_pred HHHHHHHHHHHHHHHHHCC-CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCE T ss_conf 9999999999999998433-89998998165332569999999967776384 No 24 >d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Probab=80.77 E-value=1.6 Score=20.53 Aligned_cols=51 Identities=18% Similarity=0.123 Sum_probs=36.0 Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHC----CCEEEECCHHHCCCHHHHHHHHHHHH Q ss_conf 5523654133458799999999999868----98899628788772589999999999 Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVLH----GFRFVAPPARLCTDNAVMIAWAALER 326 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~~----~~~~~~P~~~~ctDNAaMIA~ag~~~ 326 (363) .+..+|++|+++.+..+.+.+++...++ +.++.... ..|+|..|+.|.+-+ T Consensus 114 dP~~IvlgG~i~~~~~~~~~i~~~~~~~~~~~~~~I~~s~---l~~~a~~~GAA~lA~ 168 (170) T d2aa4a2 114 DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAH---YRHDAGLLGAALLAQ 168 (170) T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECS---CSSCHHHHHHHHHHH T ss_pred CCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC---CCCCHHHHHHHHHHC T ss_conf 9889999582552056899999999845577898599658---788389999999977 No 25 >d2d0oa2 c.55.1.6 (A:1-92,A:255-403) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Probab=79.43 E-value=1.8 Score=20.24 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=47.7 Q ss_pred CEEEEEECCCHHHEEEEEECC-CCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE Q ss_conf 468875026022077887338-8884189887311334621218714559999999969999999999838982245368 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRK-DSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~-~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363) ++|-|||--+.+|-+|+-+.. +.+-+.++.-+.... |+.-. ++...-+..-+++++++++++++|+|.| T Consensus 2 ~~IaGiDIGNstTEvala~v~~~g~~~fl~S~i~~TT-------GiKGT---~~Ni~Gv~~aL~~al~k~g~~~~d~~lI 71 (241) T d2d0oa2 2 RYIAGIDIGNSSTEVALATLDEAGALTITHSALAETT-------GIKGT---LRNVFGIQEALALVARGAGIAVSDISLI 71 (241) T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECC-------SSTTS---TTHHHHHHHHHHHHHHHHTCCGGGEEEE T ss_pred CEEEEEECCCCHHHHHEEEECCCCCEEEEECCCCCCC-------CCCCC---HHHHHHHHHHHHHHHHHCCCCHHHHHEE T ss_conf 5598985076222411035158984799951433455-------65562---7889999999999999749997770134 Q ss_pred EEC Q ss_conf 740 Q gi|254781038|r 85 AVT 87 (363) Q Consensus 85 avt 87 (363) -.. T Consensus 72 riN 74 (241) T d2d0oa2 72 RIN 74 (241) T ss_dssp EEE T ss_pred EEC T ss_conf 533 No 26 >d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Probab=75.04 E-value=0.19 Score=26.94 Aligned_cols=76 Identities=12% Similarity=0.199 Sum_probs=47.0 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE Q ss_conf 468875026022077887338888418988731133462121871--455999999996999999999983898224536 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGV--VPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv--~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363) .+|||||-..-..-++++ |.++++++...........+-|.+ .|+. .-+.+..++++++.+++++..+|.+ T Consensus 1 nyvlgiDiGTtsvKa~l~---D~~g~~~~~~~~~~~~~~~~~g~~eqd~~~----~~~~~~~~~~~~~~~~~~~~~~i~a 73 (252) T d1r59o1 1 NYVMAIDQGTTSSRAIIF---DRNGKKIGSSQKEFPQYFPKSGWVEHNANE----IWNSVQSVIAGAFIESGIRPEAIAG 73 (252) T ss_dssp CEEEEEBCCSSBCBCCEE---CSSSCBCCCCCCBCCCCCCSTTCCBCCGGG----SSSTTTTTSHHHHTTTTCCTTSEEE T ss_pred CEEEEEEECCCCEEEEEE---ECCCCEEEEEEEECCCEECCCCCEEECHHH----HHHHHHHHHHHHHHHHHHCCCCCCE T ss_conf 979999842234353589---487989999998478260699917989999----9999999988776652211156406 Q ss_pred EEECC Q ss_conf 87406 Q gi|254781038|r 84 IAVTA 88 (363) Q Consensus 84 Iavt~ 88 (363) |++|. T Consensus 74 I~is~ 78 (252) T d1r59o1 74 IGITN 78 (252) T ss_dssp EEECC T ss_pred EEEEC T ss_conf 99967 No 27 >d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Probab=75.01 E-value=2.3 Score=19.42 Aligned_cols=49 Identities=24% Similarity=0.226 Sum_probs=31.8 Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHC------CCEEEECCHHHCCCHHHHHHHHHH Q ss_conf 5523654133458799999999999868------988996287887725899999999 Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVLH------GFRFVAPPARLCTDNAVMIAWAAL 324 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~~------~~~~~~P~~~~ctDNAaMIA~ag~ 324 (363) ++..+|++||++....+.+.+.+..+++ ..++..+ --.|+|..++.+.+ T Consensus 128 dPe~IvlGG~i~~~~~~~~~l~~~~~~~~~~~~~~~~I~~s---~lg~~a~~~GAA~l 182 (186) T d2ap1a1 128 DPDLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERA---RHGDAGGMRGAAFL 182 (186) T ss_dssp CCSEEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEEC---SCTTTHHHHHHHHT T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC---CCCCHHHHHHHHHH T ss_conf 96889988724316999999999999972475779889978---98886999999988 No 28 >d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Probab=74.65 E-value=2.4 Score=19.36 Aligned_cols=29 Identities=7% Similarity=0.155 Sum_probs=24.6 Q ss_pred CCCCCEEEEEHHHHHHHHHHHHHHHHHHH Q ss_conf 44552365413345879999999999986 Q gi|254781038|r 271 PHKQAVLVVSGGVASNHFIRASLIDLCVL 299 (363) Q Consensus 271 ~~~~~~lvv~GGVaaN~~LR~~l~~~~~~ 299 (363) ...+..+++.||-+...+||+++++...+ T Consensus 146 ~~~Id~v~lvGG~sr~p~l~~~i~~~f~~ 174 (198) T d1dkgd2 146 VSDIDDVILVGGQTRMPMVQKKVAEFFGK 174 (198) T ss_dssp TTTCCEEEEESGGGGSHHHHHHHHHHHSS T ss_pred HHHCCEEEEECCCCCCHHHHHHHHHHHCC T ss_conf 66775899976764777999999999787 No 29 >d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Probab=74.54 E-value=2.4 Score=19.34 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=59.3 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) |+ ||||=--..+.++++ |.+++++...+..... . -.....+.+..+++++..+.+ .+.+|+ T Consensus 1 My-iGiDiGgT~i~~~l~---d~~g~i~~~~~~~t~~--~---------~~~~~~~~i~~~i~~~~~~~~----~~~~ig 61 (117) T d2ap1a2 1 MY-YGFDIGGTKIALGVF---DSTRRLQWEKRVPTPH--T---------SYSAFLDAVCELVEEADQRFG----VKGSVG 61 (117) T ss_dssp EE-EEEEECSSEEEEEEE---ETTCCEEEEEEEECCC--S---------CHHHHHHHHHHHHHHHHHHHT----SCCEEE T ss_pred CE-EEEEECCCEEEEEEE---ECCCCEEEEEEEEECC--C---------CHHHHHHHHHHHHHHHHHHCC----CCEEEE T ss_conf 99-999978010999999---6999999998774024--5---------789999999999999886267----412698 Q ss_pred ECCCCCHH------------HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC Q ss_conf 40664301------------256779999999887514864333036776530 Q gi|254781038|r 86 VTAGPGLM------------GGLIVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363) Q Consensus 86 vt~gPG~~------------~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363) ++. ||.. .+ .-+...++-|...+++|++=.|-..+-+++ T Consensus 62 i~~-pG~vd~~~g~i~~~~~~~-w~~~~l~~~l~~~~~~pv~l~NDan~aala 112 (117) T d2ap1a2 62 IGI-PGMPETEDGTLYAANVPA-ASGKPLRADLSARLDRDVRLDNDANCFALS 112 (117) T ss_dssp EEE-SSBSCCTTSCCBCTTCTT-TTTSCHHHHHHHHHTSCEEEEEHHHHHHHH T ss_pred EEC-CCCCCCCCCEEECCCCCC-CCCCCHHHHHHHHHCCCEEEEEHHHHHHHH T ss_conf 723-775434566660467655-579758999988769989997478766764 No 30 >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Probab=72.13 E-value=2.7 Score=18.96 Aligned_cols=52 Identities=12% Similarity=-0.019 Sum_probs=37.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 9999999969999999999838982245368740664301256779999999887514864 Q gi|254781038|r 54 VAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPF 114 (363) Q Consensus 54 ~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pl 114 (363) ...++=.++++.+++++|++++++.+|||.+.+..+-. .+.+.++..+++|- T Consensus 41 ~v~~~av~~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~---------~~~~~v~~~lgi~~ 92 (153) T d1mzja2 41 RVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANL---------RIIDVLVDRLGVPE 92 (153) T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCH---------HHHHHHHHHHTCCT T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCH---------HHHHHHHHHHCCCC T ss_conf 99999999999999999997098734488899868737---------78999999819980 No 31 >d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Probab=70.57 E-value=2.9 Score=18.73 Aligned_cols=59 Identities=5% Similarity=-0.006 Sum_probs=30.8 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCEEEEEHHHHHH-HHHHHHHHHHHHHCC Q ss_conf 999999999999999999999998762--14455236541334587-999999999998689 Q gi|254781038|r 243 ICASFQVTVVRILQARLKQGFLLFRKA--FPHKQAVLVVSGGVASN-HFIRASLIDLCVLHG 301 (363) Q Consensus 243 iaasfQ~~i~~~L~~k~~~a~~~~~~~--~~~~~~~lvv~GGVaaN-~~LR~~l~~~~~~~~ 301 (363) +|...-+...+.|.+-+...+..+... .....-.|+++|||.-| ..||+.+++...++. T Consensus 113 ~A~~Il~~aa~~La~~i~~~~~~l~~~~~~~~~~~~Vvl~Ggv~~~~~~l~~~~~~~L~~~~ 174 (227) T d2ch5a1 113 LSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGR 174 (227) T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEECHHHHCCHHHHHHHHHHHHHHC T ss_conf 99999999999999999999986190320456687758853576446589999999999842 No 32 >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Probab=69.72 E-value=3.1 Score=18.61 Aligned_cols=35 Identities=11% Similarity=0.161 Sum_probs=28.7 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC Q ss_conf 99999996999999999983898224536874066 Q gi|254781038|r 55 AARAHVDVLDILIKQTLLRANMQISDMDSIAVTAG 89 (363) Q Consensus 55 A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~g 89 (363) ..+.=++.++.+++++|++++++.+|||.+..-.. T Consensus 41 vf~~a~~~vp~~i~~~L~~~g~~~~dId~~i~Hqa 75 (149) T d1ub7a2 41 VFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQA 75 (149) T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCS T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC T ss_conf 99999999999999998752013456347885064 No 33 >d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} Probab=67.17 E-value=3.4 Score=18.26 Aligned_cols=275 Identities=14% Similarity=0.073 Sum_probs=111.0 Q ss_pred EEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE Q ss_conf 68875026022077887338888418988731133462121871455999999996999999999983898224536874 Q gi|254781038|r 7 TVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAV 86 (363) Q Consensus 7 ~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iav 86 (363) +-|+||==--.+-+++++.+ .+.|....+.+-. .+ +.+..++++.+++.+.++..| +|++ T Consensus 2 y~L~~DIGGT~ir~glvd~~--~~~i~~~~~~~~~----~~-------------~~~~~~i~~~~~~~~~~~~~i-gI~~ 61 (319) T d1sz2a1 2 YALVGDVGGTNARLALCDIA--SGEISQAKTYSGL----DY-------------PSLEAVIRVYLEEHKVEVKDG-CIAI 61 (319) T ss_dssp EEEEEEEETTEEEEEEEETT--TCCEEEEEEEEGG----GC-------------SCHHHHHHHHHHHSCCCCCEE-EEEE T ss_pred EEEEEEECHHHEEEEEEECC--CCEEEEEEEECCC----CH-------------HHHHHHHHHHHHHCCCCCCEE-EEEC T ss_conf 79999988111443799999--9989788876899----87-------------579999999998638876669-9982 Q ss_pred CCCC-----CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC------------CCCCCCEEEEEECCCEEE Q ss_conf 0664-----30125677999999988751486433303677653013225------------679984399970687479 Q gi|254781038|r 87 TAGP-----GLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTD------------DIAFPYLVLLVSGGHTQI 149 (363) Q Consensus 87 t~gP-----G~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~------------~~~~PfL~LlvSGGhT~l 149 (363) . || +..............+......|+.-.|-..+..+...... .-..-++.+-...|-..+ T Consensus 62 p-G~vd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~g~G~g~~ 140 (319) T d1sz2a1 62 A-CPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVA 140 (319) T ss_dssp S-SCCCSSEECCSSSCCCEEHHHHHHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSEEEE T ss_pred C-CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEE T ss_conf 2-587787642121355668578887640221220100456533654455646776376557786349998446642578 Q ss_pred EEECCCCCCEE----CCCC-CCCCHHHHHHHHHH------HCCC-CCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC Q ss_conf 99837564300----0223-36300238888988------5288-76103556665540573334586111068875422 Q gi|254781038|r 150 LLVRDVAHYDR----LGTT-IDDALGECFDKIAK------SLGL-PYPGGVEIEKAALMGDGKRFKFPCPLVQGTLCDFS 217 (363) Q Consensus 150 ~~~~~~~~~~i----lg~T-~Dda~Ge~~DK~ar------~Lgl-~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~~~dFS 217 (363) +..+-...... +|.. ++....+..+..+. ..-+ .|=.|+.++++++.-....- .+.. . . T Consensus 141 ~~~~~~~g~~~~agE~G~~~~~~~~~~~~~~~~~~~~~g~~g~~E~~~Sg~~l~~~~~~~~~~~~---~~~~-----~-~ 211 (319) T d1sz2a1 141 HLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADN---RLPE-----N-L 211 (319) T ss_dssp EEEEETTEEEEEECCGGGSBCCCCSHHHHHHHHHHHHHSSSCBGGGTSSHHHHHHHHHHHHHHTT---CCCC-----C-C T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC---CCCH-----H-C T ss_conf 87213577400265456556678640110103445405786426665252047899999875357---8711-----1-0 Q ss_pred CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH--HHHHH-HHH Q ss_conf 102458999999851120121068899999999999999999999999876214455236541334587--99999-999 Q gi|254781038|r 218 FSGLKTSVQKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASN--HFIRA-SLI 294 (363) Q Consensus 218 FSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN--~~LR~-~l~ 294 (363) . ..+. +.+.... ..+.+....+...+.+.......+..+ .....+++.|||+++ .++.+ .+. T Consensus 212 ~-~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ivigGG~~~~~~~~~~~~~~~ 276 (319) T d1sz2a1 212 K-PKDI-TERALAD--------SCTDCRRALSLFCVIMGRFGGNLALNL-----GTFGGVFIAGGIVPRFLEFFKASGFR 276 (319) T ss_dssp C-HHHH-HHHHHHT--------CCHHHHHHHHHHHHHHHHHHHHHHHHH-----TCTTEEEEECSSSGGGHHHHHHSSHH T ss_pred C-CHHH-HHHHHHC--------CHHHHHHHHHHHHHHHHHHHHHHHHEE-----CCCCCCEEECCHHHHHHHHHCHHHHH T ss_conf 2-1699-9998633--------227888877899999987777552301-----38887489651365546663429999 Q ss_pred H-HHHH-------CCCEEEECCHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 9-9986-------8988996287887725899999999999849 Q gi|254781038|r 295 D-LCVL-------HGFRFVAPPARLCTDNAVMIAWAALERMEAG 330 (363) Q Consensus 295 ~-~~~~-------~~~~~~~P~~~~ctDNAaMIA~ag~~~~~~g 330 (363) + +..+ ..+++..- ..|+|.+|+.+.+.+-+.| T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~----~~~dagl~GAa~~a~~~l~ 316 (319) T d1sz2a1 277 AAFEDKGRFKEYVHDIPVYLI----VHDNPGLLGSGAHLRQTLG 316 (319) T ss_dssp HHHHCCGGGHHHHTTCCEEEE----CCSCHHHHHHHHHHHHHTT T ss_pred HHHHHCCCHHHHHHCCCEEEE----ECCCHHHHHHHHHHHHHHH T ss_conf 999854435668627767999----8985649999999998601 No 34 >d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei [TaxId: 5691]} Probab=65.36 E-value=2.1 Score=19.76 Aligned_cols=42 Identities=19% Similarity=0.457 Sum_probs=31.6 Q ss_pred CCCEEEEEHHHHHHHHHHHH-------------------HHHHHHHCCCEEEECCHHHCCCH Q ss_conf 55236541334587999999-------------------99999868988996287887725 Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRAS-------------------LIDLCVLHGFRFVAPPARLCTDN 315 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~-------------------l~~~~~~~~~~~~~P~~~~ctDN 315 (363) +...+++ ||+.||.+|..+ +.+.+++++.++++|..-.|.+| T Consensus 229 k~D~ili-gG~~antfL~a~G~~iG~sl~e~~~~~~a~~i~~~~~~~~~~i~lP~D~~v~~~ 289 (415) T d16pka_ 229 RIDYLLI-GGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTE 289 (415) T ss_dssp GCSEEEE-CTTHHHHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSSEEEESS T ss_pred HCCEEEE-CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCC T ss_conf 3655653-221888999980980554430444321266652232115167851120330310 No 35 >d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]} Probab=64.90 E-value=3.8 Score=17.97 Aligned_cols=67 Identities=21% Similarity=0.344 Sum_probs=38.2 Q ss_pred CCEEEEEECC-CHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE Q ss_conf 8468875026-022077887338888418988731133462121871455999999996999999999983898224536 Q gi|254781038|r 5 KKTVIGIETS-CDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363) Q Consensus 5 ~~~ILgIETS-cd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363) .+.|||||-- -+-|-+|++ |.+|+++.+.++. .|.. .-.-+ .-.+. +.+.+++ ..++. T Consensus 4 ~~~vlg~DPg~r~gck~Avl---D~~G~vld~~viy---p~~~--~~~~~----~a~~~----l~~li~k-----~~p~v 62 (149) T d3bzka5 4 PRATLGLDPGLRTGVKVAVV---DATGKLLDTATVY---PHAP--KNQWD----QTLAV----LAALCAK-----HQVEL 62 (149) T ss_dssp SCCEEEEECCSTTCEEEEEE---CTTSCEEEEEEEC---CSTT--TCCHH----HHHHH----HHHHHHH-----TTCCE T ss_pred CCEEEEECCCCCCCCEEEEE---CCCCCEEEEEEEE---CCCC--HHHHH----HHHHH----HHHHHHH-----CCCEE T ss_conf 85588878886566189999---7999989999984---3796--77999----99999----9999998-----39869 Q ss_pred EEECCCCCH Q ss_conf 874066430 Q gi|254781038|r 84 IAVTAGPGL 92 (363) Q Consensus 84 Iavt~gPG~ 92 (363) |+++.|... T Consensus 63 IaIGNgTas 71 (149) T d3bzka5 63 IAIGNGTAS 71 (149) T ss_dssp EEEESSTTH T ss_pred EEECCCCCH T ss_conf 997798527 No 36 >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Probab=64.29 E-value=3.9 Score=17.89 Aligned_cols=64 Identities=9% Similarity=-0.067 Sum_probs=42.6 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC----CHHHHHHHHCC Q ss_conf 99999996999999999983898224536874066430125677999999988751486433----30367765301 Q gi|254781038|r 55 AARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYA----INHLEGHILTA 127 (363) Q Consensus 55 A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~----VnH~~aH~~~~ 127 (363) ..++-.++++++++++|++++++.+|||.+..-.+ + ...-+.++..+++|--- +-+--||.-++ T Consensus 42 Vf~~a~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa-~--------~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sa 109 (148) T d1u6ea2 42 VFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQA-N--------SRINELLVKNLQLRPDAVVANDIEHTGNTSAA 109 (148) T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCS-C--------HHHHHHHHHHHTCCTTCEECCTHHHHCBCGGG T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC-C--------HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC T ss_conf 99999999999999999982898555558986144-2--------77799988852898111120058763887301 No 37 >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Probab=64.01 E-value=2.8 Score=18.83 Aligned_cols=55 Identities=24% Similarity=0.169 Sum_probs=40.2 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 714559999999969999999999838982245368740664301256779999999887514864333 Q gi|254781038|r 49 GVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAI 117 (363) Q Consensus 49 Gv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~V 117 (363) -.+|..+ +++.+.++++|++++++.+|||.+.+..+ +...-+.++..+++|-=-+ T Consensus 36 ~~~p~~i-----~~~~~~i~~~l~~~g~~~~did~~~~Hq~---------~~~i~~~i~~~Lgl~~~k~ 90 (148) T d1u0ma2 36 KRVPATM-----EPLAPALKELAGEHGWDASDLDFYIVHAG---------GPRILDDLSTFLEVDPHAF 90 (148) T ss_dssp TTTGGGH-----HHHHHHHHHHHHTTSCCSSCCSCCEEECS---------HHHHHHHHHHHSCSCGGGG T ss_pred CCCCHHH-----HHHHHHHHHHHHHHCCCHHHCCEEEECCC---------CHHHHHHHHHHHCCCHHHH T ss_conf 2153578-----88879998889881979899899998899---------8899999999849983321 No 38 >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Probab=63.93 E-value=3.2 Score=18.49 Aligned_cols=63 Identities=19% Similarity=0.264 Sum_probs=43.5 Q ss_pred HHHHHHHHHHHHH-CCCCCCCCCEEEECCC-CCHHHHHHHHHHHHHHHHHHHC----CCCCCCHHHHHHHHCC Q ss_conf 9699999999998-3898224536874066-4301256779999999887514----8643330367765301 Q gi|254781038|r 61 DVLDILIKQTLLR-ANMQISDMDSIAVTAG-PGLMGGLIVGLMTAKAISYVSH----KPFYAINHLEGHILTA 127 (363) Q Consensus 61 ~~l~~li~~~l~~-a~~~~~~id~Iavt~g-PG~~~~L~vG~~~Ak~la~~~~----~Pli~VnH~~aH~~~~ 127 (363) +....+++++|++ ++++.++||.+.+..- |....+ .+.|+..++..+ +|.+-||.+-+=-+.+ T Consensus 32 dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g----~n~aR~~al~ag~p~~vp~~tV~~~C~Sgl~A 100 (262) T d1wdkc1 32 DMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQG----WNIARMASLMTQIPHTSAAQTVSRLCGSSMSA 100 (262) T ss_dssp HHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTT----TTHHHHHHTTSSSCTTSEEEEEECGGGHHHHH T ss_pred HHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCC----CCCHHHHHHHHHCCCCCCHHHCCCCCCHHHHH T ss_conf 9999999999986489897891478898303522345----31003567664303455123200453077889 No 39 >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Probab=63.43 E-value=4 Score=17.79 Aligned_cols=56 Identities=20% Similarity=0.268 Sum_probs=37.9 Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEECCCCC-HHHHHHHHHHHHHHHHHHHCCCCCCCHH Q ss_conf 699999999998389822453687406643-0125677999999988751486433303 Q gi|254781038|r 62 VLDILIKQTLLRANMQISDMDSIAVTAGPG-LMGGLIVGLMTAKAISYVSHKPFYAINH 119 (363) Q Consensus 62 ~l~~li~~~l~~a~~~~~~id~Iavt~gPG-~~~~L~vG~~~Ak~la~~~~~Pli~VnH 119 (363) .-...++++|++++++.+|||.|-++...| ..+++ ....+..|....+++.+.+++ T Consensus 78 la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~--aa~v~~~lg~~~~~~~~~i~~ 134 (200) T d1u0ma1 78 RVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSL--TAWLINEMGFDSTTRQIPIAQ 134 (200) T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCH--HHHHHHHTTCCTTCEEEEECS T ss_pred HHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCHH--HHHHHHHHHCCCCEEEECCCC T ss_conf 999999999998698841200178713689875136--899999971389936730113 No 40 >d1zxoa2 c.55.1.5 (A:107-280) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]} Probab=62.89 E-value=3.7 Score=18.05 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=25.4 Q ss_pred CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEE Q ss_conf 44552365413345879999999999986898899 Q gi|254781038|r 271 PHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFV 305 (363) Q Consensus 271 ~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~ 305 (363) ....-.+.++|||+ .++++.|++.++++++++- T Consensus 124 ~~~~~~v~~vGsva--~~~~~~l~~~l~~~~l~i~ 156 (174) T d1zxoa2 124 DYKQYPVHFIGSIA--YCYKEILQDAARQTGIQIG 156 (174) T ss_dssp CTTTSCEEECSHHH--HHTHHHHHHHTTTTTCCEE T ss_pred CCCCCEEEEECCHH--HHHHHHHHHHHHHCCCEEC T ss_conf 88885199975178--8879999999998498526 No 41 >d3eeqa1 c.151.1.1 (A:215-335) Cobalamin biosynthesis protein G, CbiG {Sulfolobus solfataricus [TaxId: 2287]} Probab=62.44 E-value=4.2 Score=17.67 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=51.1 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH-HHHHCCCCCCCCCC---- Q ss_conf 9699999999998389822453687406643012567799999998875148643330367-76530132256799---- Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLE-GHILTARLTDDIAF---- 135 (363) Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~-aH~~~~~l~~~~~~---- 135 (363) +.+...++++|.+.+++...+..|+ |..||+. .++..+++|++.++--+ ..+..+.++ +-++ T Consensus 15 ~~i~~ai~~~l~~~~l~~~~i~~ia-tie~~l~-----------~~a~~l~~pl~~~~~eeL~~~~~~~~~-pS~~v~~~ 81 (121) T d3eeqa1 15 EEIRDGIYKVLERLNLKRERIGIIA-SIREEVK-----------KIADEFNVRFRLVNEEEINNFMNPCLT-PPSKTLIE 81 (121) T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEE-ESCTTHH-----------HHHHHHTCEEEECCHHHHHTCCCTTCC-CCCCC--- T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHH-CCCHHHH-----------HHHHHCCCCEEEECHHHHHHHCCCCCC-CCHHHHHH T ss_conf 9999999999998599989999987-2888899-----------999980998599879999641378799-53999961 Q ss_pred --------CCEEEEEECCCEEEEEECC Q ss_conf --------8439997068747999837 Q gi|254781038|r 136 --------PYLVLLVSGGHTQILLVRD 154 (363) Q Consensus 136 --------PfL~LlvSGGhT~l~~~~~ 154 (363) | .+|+.||.+..|++-+. T Consensus 82 ~Gv~sVaEa-aAl~aag~~~~Li~~K~ 107 (121) T d3eeqa1 82 VGLKGVAEI-SALIAGGRNSKLILRKI 107 (121) T ss_dssp ---CCHHHH-HHHHHHCTTCCEEEEEE T ss_pred CCCCHHHHH-HHHHHCCCCCEEEEEEE T ss_conf 288739999-99995699983678889 No 42 >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Probab=59.63 E-value=4.7 Score=17.34 Aligned_cols=64 Identities=17% Similarity=0.155 Sum_probs=39.9 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHCC Q ss_conf 999999969999999999838982245368740664301256779999999887514864333---0367765301 Q gi|254781038|r 55 AARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAI---NHLEGHILTA 127 (363) Q Consensus 55 A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~V---nH~~aH~~~~ 127 (363) ..+.=.++++.+++++|++++++.+|||.+..-.. + .+ .-..++..+++|-=.+ -+-.||.-++ T Consensus 38 vf~~av~~~~~~i~~~L~~~g~~~~dId~~i~Hq~-~----~~----~~~~~~~~l~l~~~k~~~~~~~~GN~~sa 104 (143) T d1hnja2 38 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQA-N----LR----IISATAKKLGMSMDNVVVTLDRHGNTSAA 104 (143) T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCS-C----HH----HHHHHHHHTTCCGGGBCCCHHHHCBCGGG T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC-C----HH----HHHHHHHHCCCCHHHHHHHHHHHCCCCCC T ss_conf 73243431037799999986422344426886057-6----68----99999986763065554455531565520 No 43 >d2b06a1 d.113.1.1 (A:1-155) Hypothetical protein SP1235 (spr1115) {Streptococcus pneumoniae [TaxId: 1313]} Probab=58.75 E-value=4.8 Score=17.24 Aligned_cols=73 Identities=14% Similarity=0.284 Sum_probs=43.2 Q ss_pred CCCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 98888468875026022077887338888418988731133462121----87145599999999699999999998389 Q gi|254781038|r 1 MSKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHY----GGVVPEVAARAHVDVLDILIKQTLLRANM 76 (363) Q Consensus 1 m~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~----GGv~P~~A~~~H~~~l~~li~~~l~~a~~ 76 (363) |++.++.|+ |++|++.+. .++++|--.+.........| |.+-|.+. ...-+++++.+|.|+ T Consensus 1 m~~~~~~~~--------~~~~~i~~~-~~~~lLl~~R~~~~~~~~~w~~PGG~ve~gEs------~~~aa~RE~~EEtGl 65 (155) T d2b06a1 1 MSRSQLTIL--------TNICLIEDL-ETQRVVMQYRAPENNRWSGYAFPGGHVENDEA------FAESVIREIYEETGL 65 (155) T ss_dssp CCGGGCEEE--------EEEEEEEET-TTTEEEEEEEC-----CCEEECCCCBCCTTSC------HHHHHHHHHHHHHSE T ss_pred CCCCCCEEE--------EEEEEEEEC-CCCEEEEEEECCCCCCCCCEECCEEEECCCCC------HHHHHHHHHHHHCCE T ss_conf 998775789--------899999989-99999999978999999869995567758999------899999998876075 Q ss_pred CCCCCCEEEECC Q ss_conf 822453687406 Q gi|254781038|r 77 QISDMDSIAVTA 88 (363) Q Consensus 77 ~~~~id~Iavt~ 88 (363) ....+..+++.. T Consensus 66 ~v~~~~~~~~~~ 77 (155) T d2b06a1 66 TIQNPQLVGIKN 77 (155) T ss_dssp EEESCEEEEEEE T ss_pred EEEEEEEEEEEE T ss_conf 675207999997 No 44 >d1j5pa4 c.2.1.3 (A:-1-108,A:220-241) Hypothetical protein TM1643 {Thermotoga maritima [TaxId: 2336]} Probab=55.94 E-value=5.4 Score=16.93 Aligned_cols=50 Identities=12% Similarity=0.175 Sum_probs=39.7 Q ss_pred CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHHHH Q ss_conf 144552365413345879999999999986898899628788772589999999999 Q gi|254781038|r 270 FPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWAALER 326 (363) Q Consensus 270 ~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag~~~ 326 (363) .+.+...++.+-|.-++..+++.|.+.+++.+.++++|. +++-+.-++.+ T Consensus 71 L~~gk~vvi~s~~~lad~~~~~~l~~~A~~~g~~i~~~s-------gai~Gld~i~a 120 (132) T d1j5pa4 71 LKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPS-------GSMLTVYSILR 120 (132) T ss_dssp TTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCC-------TCHHHHHHHHH T ss_pred HHCCCCEEEECCHHHCCHHHHHHHHHHHHHCCCEEEEEC-------HHHCCHHHHHH T ss_conf 961798899536043042699999999998499799927-------47518699999 No 45 >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Probab=54.41 E-value=5.7 Score=16.77 Aligned_cols=60 Identities=22% Similarity=0.235 Sum_probs=39.8 Q ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH---CCCCCCCHHHHHHHHCC Q ss_conf 99999999983898224536874066430125677999999988751---48643330367765301 Q gi|254781038|r 64 DILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVS---HKPFYAINHLEGHILTA 127 (363) Q Consensus 64 ~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~---~~Pli~VnH~~aH~~~~ 127 (363) ...++++|++++++.+||+.| ..-|.|-..+=. .=+++|...+ .+|+..+.-+.||.+.+ T Consensus 65 ~~~i~~aL~~a~i~~~di~~v-~ahgtGt~~~D~---~E~~al~~~f~~~~~~v~s~K~~~GH~~~A 127 (194) T d1tqyb2 65 ERAIRLALNDAGTGPEDVDVV-FADGAGVPELDA---AEARAIGRVFGREGVPVTVPKTTTGRLYSG 127 (194) T ss_dssp HHHHHHHHHHHTCCGGGCCEE-ECCCCCSHHHHH---HHHHHHHHHHCTTCSEEECGGGGTCBCGGG T ss_pred HHHHHHHCCCCCCCCCCEEEE-ECCCCCCCCCCH---HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC T ss_conf 555543111222233220133-102467433618---786465543110232111134441454214 No 46 >d1zbsa1 c.55.1.5 (A:108-283) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} Probab=53.68 E-value=5.8 Score=16.69 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=24.9 Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 5523654133458799999999999868988996 Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVA 306 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~ 306 (363) ..-.++++|||+ .+++..++++++++++++-- T Consensus 127 ~~~pv~l~Ggv~--~~~~~~l~~~l~~~~i~i~~ 158 (176) T d1zbsa1 127 PDLPLHFIGSVA--FHYREVLSSVIKKRGLTLGS 158 (176) T ss_dssp TTSCEEEESHHH--HHTHHHHHHHHHHTTCCEEE T ss_pred CCCEEEEECCHH--HHHHHHHHHHHHHCCCEECC T ss_conf 897089978478--98899999999983987266 No 47 >d1ltka_ c.86.1.1 (A:) Phosphoglycerate kinase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Probab=50.84 E-value=4.4 Score=17.51 Aligned_cols=42 Identities=17% Similarity=0.312 Sum_probs=27.4 Q ss_pred CCCEEEEEHHHHHHHHHHH--------------------HHHHHHHHCCCEEEECCHHHCCCH Q ss_conf 5523654133458799999--------------------999999868988996287887725 Q gi|254781038|r 273 KQAVLVVSGGVASNHFIRA--------------------SLIDLCVLHGFRFVAPPARLCTDN 315 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~LR~--------------------~l~~~~~~~~~~~~~P~~~~ctDN 315 (363) +...+++ ||+.||.+|+. .+.+.+++++.++++|.--.|.++ T Consensus 231 k~D~iii-gG~mantfL~~a~g~~ig~sl~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~ 292 (417) T d1ltka_ 231 KVDRMII-GGGMAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADN 292 (417) T ss_dssp TCSEEEE-ESSHHHHHHHHHHCCCCTTSCCCTTGGGTHHHHHHHHHHTTCEEECCSEEEEESS T ss_pred HHCEEEE-EHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECC T ss_conf 5111663-0366788988614876675310356789999999999863996100232243023 No 48 >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Probab=48.82 E-value=6.9 Score=16.18 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=27.5 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC Q ss_conf 1455999999996999999999983898224536874066 Q gi|254781038|r 50 VVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAG 89 (363) Q Consensus 50 v~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~g 89 (363) -+|..+ .+++++++++.|++++++..|||..++-.| T Consensus 40 ~Vp~~~----~~~v~~~v~~~l~~~gl~~~di~~~v~Hqg 75 (160) T d1ee0a2 40 DVPLMV----AKNIENAAEKALSPLGITDWNSVFWMVHPG 75 (160) T ss_dssp THHHHH----HHHHHHHHHHHHGGGTCCCGGGSEEEECCS T ss_pred HHHHHH----HHHHHHHHHHHHHHCCCCCCCCCEEEECCC T ss_conf 417999----999999999998316588543555866677 No 49 >d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima [TaxId: 2336]} Probab=48.17 E-value=5.6 Score=16.82 Aligned_cols=42 Identities=19% Similarity=0.406 Sum_probs=26.5 Q ss_pred CCCEEEEEHHHHHHHHHH-------------------HHHHHHHHHCCCEEEECCHHHCCCH Q ss_conf 552365413345879999-------------------9999999868988996287887725 Q gi|254781038|r 273 KQAVLVVSGGVASNHFIR-------------------ASLIDLCVLHGFRFVAPPARLCTDN 315 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~LR-------------------~~l~~~~~~~~~~~~~P~~~~ctDN 315 (363) +...+++ ||+.||.+|. +.+.+.+++++.+++.|-.-.|..+ T Consensus 210 k~D~iii-gG~~antfL~a~G~~iG~sl~e~~~~~~~~~i~~~a~~~~~~i~lP~d~~v~~~ 270 (398) T d1vpea_ 210 KADRILI-GGAMMFTFLKALGKEVGSSRVEEDKIDLAKELVEKAKEKGVEIVLPVDAVIAQK 270 (398) T ss_dssp TCSEEEE-CTTTHHHHHHHTSCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEECCSEEEEESS T ss_pred HCCEEEE-CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCC T ss_conf 5022232-423789999974997788753412567899999876652885110010121100 No 50 >d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Probab=47.80 E-value=6.9 Score=16.17 Aligned_cols=50 Identities=18% Similarity=0.222 Sum_probs=32.5 Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHCCCC Q ss_conf 245368740664301256779999999887514864333---036776530132 Q gi|254781038|r 79 SDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAI---NHLEGHILTARL 129 (363) Q Consensus 79 ~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~V---nH~~aH~~~~~l 129 (363) .+.|+|-.+-|||.+.-...-....+. .+..++|++|| |.+-||.+-+.+ T Consensus 79 ~~pdgivlS~GPg~P~~~~~~~~~~~~-~~~~~iPILGIClG~Qlia~~~Gg~v 131 (228) T d1a9xb2 79 MNPDGIFLSNGPGDPAPCDYAITAIQK-FLETDIPVFGICLGHQLLALASGAKT 131 (228) T ss_dssp TCCSEEEECCCSBCSTTCHHHHHHHHH-HTTSCCCEEEETHHHHHHHHHTTCCE T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHH-HHHCCCCEEEEECCHHHHHHHCCCCE T ss_conf 499999982887765321127899999-98179988999767589998769961 No 51 >d1phpa_ c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus stearothermophilus [TaxId: 1422]} Probab=47.67 E-value=4.6 Score=17.37 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=39.7 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC----HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC Q ss_conf 99699999999998389822453687406643----01256779999999887514864333036776530132256799 Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPG----LMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAF 135 (363) Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG----~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~ 135 (363) ++...|.|+.++++ +-++- .++==-.|. -.-+| .-.++.|...++.|+.-+....+...-.. ...++. T Consensus 37 I~~~~pTI~~ll~~-~akvv---l~SH~GRPkgk~~~~~Sl---~~~~~~L~~~l~~~v~f~~~~~~~~~~~~-i~~l~~ 108 (394) T d1phpa_ 37 IRAALPTIRYLIEH-GAKVI---LASHLGRPKGKVVEELRL---DAVAKRLGELLERPVAKTNEAVGDEVKAA-VDRLNE 108 (394) T ss_dssp HHHHHHHHHHHHHT-TCEEE---EECCCSCCCSSCCGGGCS---HHHHHHHHHHHTSCCEECSCSSSHHHHHH-HHTCCT T ss_pred HHHHHHHHHHHHHC-CCEEE---EECCCCCCCCCCCCCCCH---HHHHHHHHHHCCCCCCCCCCCCCHHHHHH-HHHCCC T ss_conf 99999999999978-99899---985888999988865556---99999998740624111344356789999-960578 Q ss_pred CCEEEEEECCCEEEEEECCCCCCE Q ss_conf 843999706874799983756430 Q gi|254781038|r 136 PYLVLLVSGGHTQILLVRDVAHYD 159 (363) Q Consensus 136 PfL~LlvSGGhT~l~~~~~~~~~~ 159 (363) | ++++.++..-|. T Consensus 109 --------g---~i~lLEN~Rf~~ 121 (394) T d1phpa_ 109 --------G---DVLLLENVRFYP 121 (394) T ss_dssp --------T---CEEECCCGGGSH T ss_pred --------C---CEEEEHHHHHCC T ss_conf --------9---788635445354 No 52 >d1z6ra3 c.55.1.10 (A:211-406) Mlc protein {Escherichia coli [TaxId: 562]} Probab=46.41 E-value=7.5 Score=15.94 Aligned_cols=48 Identities=6% Similarity=0.082 Sum_probs=32.0 Q ss_pred CCCEEEEEHHHHH-HHHHHHHHHHHHHH-------CCCEEEECCHHHCCCHHHHHHHHH Q ss_conf 5523654133458-79999999999986-------898899628788772589999999 Q gi|254781038|r 273 KQAVLVVSGGVAS-NHFIRASLIDLCVL-------HGFRFVAPPARLCTDNAVMIAWAA 323 (363) Q Consensus 273 ~~~~lvv~GGVaa-N~~LR~~l~~~~~~-------~~~~~~~P~~~~ctDNAaMIA~ag 323 (363) .+..+|++|+++. +..+.+.+++..++ ..+++..... .|+|..++.+- T Consensus 124 dP~~IvigG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~~s~l---~~~a~~~GAAl 179 (196) T d1z6ra3 124 NPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQF---SNQGTMAGAAL 179 (196) T ss_dssp CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSC---CCCTTTTHHHH T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC---CCHHHHHHHHH T ss_conf 998899966435525899999999999854310378868998998---98499999999 No 53 >d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=45.53 E-value=5.8 Score=16.71 Aligned_cols=51 Identities=18% Similarity=0.133 Sum_probs=27.4 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCC Q ss_conf 125677999999988751486433303677653013225679984399970687479998375643 Q gi|254781038|r 93 MGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVAHY 158 (363) Q Consensus 93 ~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~ 158 (363) ..+| .-.|+.|+..++.|+.=++.+.+--...... .++ .-++++.++..-| T Consensus 73 ~~Sl---~~va~~L~~~l~~~V~f~~d~~g~~~~~~i~-~l~-----------~g~I~LLENvRF~ 123 (415) T d1qpga_ 73 KYSL---APVAKELQSLLGKDVTFLNDCVGPEVEAAVK-ASA-----------PGSVILLENLRYH 123 (415) T ss_dssp GGCS---HHHHHHHHHHHTSCCEEESCSSSHHHHHHHH-TCC-----------TTEEEEECCGGGS T ss_pred CCCH---HHHHHHHHHHHCCCEEEECCCCCCCCCCCCC-CCC-----------CCCEEEEECCCCC T ss_conf 7686---9999999853198469845777763110123-344-----------6757994211114 No 54 >d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Probab=45.39 E-value=7.7 Score=15.83 Aligned_cols=50 Identities=8% Similarity=0.089 Sum_probs=33.1 Q ss_pred CEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC-CHHHCCCHHHHHHHHHHHHH Q ss_conf 236541334587999999999998689889962-87887725899999999999 Q gi|254781038|r 275 AVLVVSGGVASNHFIRASLIDLCVLHGFRFVAP-PARLCTDNAVMIAWAALERM 327 (363) Q Consensus 275 ~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P-~~~~ctDNAaMIA~ag~~~~ 327 (363) ..++++||-+.-..+|+.+++.. +.++... .|.+|.=-||.|+.-.+..+ T Consensus 139 ~~IvLvGGsS~ip~v~~~l~~~f---g~~v~~~~~P~~aVA~GAai~~~~~~~~ 189 (196) T d1jcea2 139 RGIFLTGGGSLLRGLDTLLQKET---GISVIRSEEPLTAVAKGAGMVLDKVNIL 189 (196) T ss_dssp HCEEEESGGGCSBTHHHHHHHHH---SSCEEECSSTTTHHHHHHHHGGGCHHHH T ss_pred CCEEEECCHHCCHHHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHHCHHHH T ss_conf 51698574114150999999998---8498627886779999999999787999 No 55 >d1t94a2 e.8.1.7 (A:75-407) DNA polymerase kappa {Human (Homo sapiens) [TaxId: 9606]} Probab=45.19 E-value=5.7 Score=16.77 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=26.9 Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCH Q ss_conf 654133458799999999999868988996287 Q gi|254781038|r 277 LVVSGGVASNHFIRASLIDLCVLHGFRFVAPPA 309 (363) Q Consensus 277 lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~ 309 (363) +-++-|||.|+.|-+....+.+..+..++.|.. T Consensus 233 ~t~SaGIa~NK~LAKLAs~~~KPngq~~i~~~~ 265 (333) T d1t94a2 233 LTASAGIAPNTMLAKVCSDKNKPNGQYQILPNR 265 (333) T ss_dssp CCEEEEEESSHHHHHHHHHHTTTTCEEECCSSH T ss_pred CCEEEEECCCHHHHHHHHHHCCCCCCCEECCCH T ss_conf 876876776489999999865767553006999 No 56 >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Probab=44.42 E-value=8 Score=15.73 Aligned_cols=78 Identities=17% Similarity=0.162 Sum_probs=46.9 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC-CCHHHHHHHHHHHHHHHHHHHCC----CCCCC Q ss_conf 62121871455999999996999999999983898224536874066-43012567799999998875148----64333 Q gi|254781038|r 43 QHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAG-PGLMGGLIVGLMTAKAISYVSHK----PFYAI 117 (363) Q Consensus 43 ~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~g-PG~~~~L~vG~~~Ak~la~~~~~----Pli~V 117 (363) .-+++||.....- =.+....+++++|++++++.++||.+-++.- |+-..+ .+.|+..++..++ |-+-| T Consensus 11 Pfgk~~G~l~~~~---~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~----~n~aR~~al~aGlp~~vp~~tV 83 (273) T d1ulqa1 11 PIGKHGGALASVR---PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDN----RNVARMALLLAGFPVEVAGCTV 83 (273) T ss_dssp CCEETTSTTTTSC---HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTT----TTHHHHHHHHTTCCTTCEEEEE T ss_pred CCCCCCCCCCCCC---HHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCC----CCHHHHHHHHCCCCCCCCEEEE T ss_conf 2226998778898---89999999999999809798998979998445545443----2299999997697976525897 Q ss_pred HHHHHHHHCC Q ss_conf 0367765301 Q gi|254781038|r 118 NHLEGHILTA 127 (363) Q Consensus 118 nH~~aH~~~~ 127 (363) |.+-+==+.+ T Consensus 84 n~~CaSg~~A 93 (273) T d1ulqa1 84 NRLCGSGLEA 93 (273) T ss_dssp ECGGGHHHHH T ss_pred ECCCCHHHHH T ss_conf 3353067788 No 57 >d1woqa2 c.55.1.10 (A:140-263) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} Probab=44.08 E-value=8.1 Score=15.70 Aligned_cols=44 Identities=16% Similarity=0.170 Sum_probs=26.6 Q ss_pred CCCEEEEEHHHHHHHH-HHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHH Q ss_conf 5523654133458799-999999999868988996287887725899999999 Q gi|254781038|r 273 KQAVLVVSGGVASNHF-IRASLIDLCVLHGFRFVAPPARLCTDNAVMIAWAAL 324 (363) Q Consensus 273 ~~~~lvv~GGVaaN~~-LR~~l~~~~~~~~~~~~~P~~~~ctDNAaMIA~ag~ 324 (363) ++..+|++|||+.... +.+.+ +...++..+. ..|+|.+|+.|=. T Consensus 75 dPe~IVlGGgi~~~~~~~~~~l-----~~~~~i~~a~---l~~~AgliGAAl~ 119 (124) T d1woqa2 75 SPELFIVGGGISKRADEYLPNL-----RLRTPIVPAV---LRNEAGIVGAAIE 119 (124) T ss_dssp CCSEEEEESGGGGGGGGTGGGC-----CCSSCEEECS---CSTTHHHHHHHHH T ss_pred CCCEEEECCHHHHCHHHHHHHH-----HCCCEEEECC---CCCCHHHHHHHHH T ss_conf 9898999362763758774440-----0257699567---4780899999999 No 58 >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Probab=43.62 E-value=8.2 Score=15.65 Aligned_cols=56 Identities=11% Similarity=0.211 Sum_probs=35.0 Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEECCCCCHH-HHHHHHHHHHHHHHHHHCCCCCCCHH Q ss_conf 69999999999838982245368740664301-25677999999988751486433303 Q gi|254781038|r 62 VLDILIKQTLLRANMQISDMDSIAVTAGPGLM-GGLIVGLMTAKAISYVSHKPFYAINH 119 (363) Q Consensus 62 ~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~-~~L~vG~~~Ak~la~~~~~Pli~VnH 119 (363) .-....+++|++++++.+|||+|-+..-+|+. |++ ....++.|...-+...+.+++ T Consensus 95 la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~--a~~v~~~LGl~~~~~~~~~~~ 151 (372) T d1teda_ 95 LAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGV--DVAIVKELGLSPSISRVVVNF 151 (372) T ss_dssp HHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCH--HHHHHHHHTCCTTCEEEEEES T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCHH--HHHHHHHHCCCCCEEEEECCC T ss_conf 999999999997599988998899964689888668--899876514687625766004 No 59 >d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} Probab=43.52 E-value=8.2 Score=15.64 Aligned_cols=108 Identities=17% Similarity=0.268 Sum_probs=59.1 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) ..|||||=--..+.+++++. ..++++.+.......... .| ..-.+.+..++++...+.. ....+..|+ T Consensus 2 ~~vlGiDiGgT~i~~~l~d~--~~g~i~~~~~~~~t~~~~-----~~----~~~~~~i~~~~~~l~~~~~-~~~~~~gIG 69 (129) T d1woqa1 2 APLIGIDIGGTGIKGGIVDL--KKGKLLGERFRVPTPQPA-----TP----ESVAEAVALVVAELSARPE-APAAGSPVG 69 (129) T ss_dssp CCEEEEEECSSEEEEEEEET--TTTEEEEEEEEEECCSSC-----CH----HHHHHHHHHHHHHHHTSTT-CCCTTCCEE T ss_pred CCEEEEEECCCEEEEEEEEC--CCCEEEEEEEECCCCCCC-----CH----HHHHHHHHHHHHHHHHCCC-CCCCCCEEE T ss_conf 98899998836699999989--999899998601424677-----89----9999999999999874014-355310463 Q ss_pred ECCCCCHH--------HHH---HHHHHHHHHHHHHHCCCCCCCHHHHHHHHC Q ss_conf 40664301--------256---779999999887514864333036776530 Q gi|254781038|r 86 VTAGPGLM--------GGL---IVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363) Q Consensus 86 vt~gPG~~--------~~L---~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363) ++. ||.. +.+ .-+....+-|...+++|++=-|...+.++. T Consensus 70 i~~-pG~vd~~~~~~~~~~~~~w~~~~l~~~l~~~~~~pv~i~NDan~aalg 120 (129) T d1woqa1 70 VTF-PGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLA 120 (129) T ss_dssp EEE-SSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHH T ss_pred ECC-EEEEECCEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHHH T ss_conf 032-104864708981344787410361566898629958998769999999 No 60 >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Probab=42.53 E-value=8.5 Score=15.54 Aligned_cols=59 Identities=10% Similarity=0.078 Sum_probs=40.1 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHC Q ss_conf 21218714559999999969999999999838982245368740664301256779999999887514 Q gi|254781038|r 44 HGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSH 111 (363) Q Consensus 44 ~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~ 111 (363) +...|.-+|..+. +++++++++.|++++++..|||.+++-.| +.++=-..+|.|.+.-+ T Consensus 30 ~~~l~~~Vp~~v~----~~i~~~~~~~l~~~~~~~~did~~i~Hqg-----g~~Ild~v~~~L~L~~~ 88 (156) T d1u0ua2 30 TFQLKGAVPDLIS----ANIENCMVEAFSQFKISDWNKLFWVVHPG-----GRAILDRVEAKLNLDPT 88 (156) T ss_dssp EEEECTTHHHHHH----HHHHHHHHHHHGGGTCCCGGGSEEEECCS-----CHHHHHHHHHHHTCCTT T ss_pred EEEECCHHHHHHH----HHHHHHHHHHHHHCCCCHHHCCEEEECCC-----CHHHHHHHHHHHCCCCC T ss_conf 9997646589999----98799999999983998534745734577-----69999999998299821 No 61 >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Probab=42.28 E-value=8.6 Score=15.51 Aligned_cols=51 Identities=8% Similarity=0.018 Sum_probs=34.8 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH Q ss_conf 871455999999996999999999983898224536874066430125677999999988 Q gi|254781038|r 48 GGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAIS 107 (363) Q Consensus 48 GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la 107 (363) +--+|..+. +++++++++.|++++++..|+|..++-.| +.+|=-..++.|. T Consensus 33 ~r~Vp~~i~----~~i~~~~~~~l~~~gl~~~di~~~v~Hqg-----g~~Ild~v~~~L~ 83 (154) T d1bi5a2 33 LKDVPGIVS----KNITKALVEAFEPLGISDYNSIFWIAHPG-----GPAILDQVEQKLA 83 (154) T ss_dssp CSCHHHHHH----HHHHHHHHHHHGGGTCCCTTSSEEEECCS-----SHHHHHHHHHHHT T ss_pred CCCHHHHHH----HHHHHHHHHHHHHCCCCCCCCCEEEECCC-----CHHHHHHHHHHHC T ss_conf 654589999----99999999999984998012645765566-----1999999999839 No 62 >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=41.99 E-value=8.7 Score=15.48 Aligned_cols=25 Identities=20% Similarity=0.372 Sum_probs=20.1 Q ss_pred HHHHHHHHHHCCCCCCCCCEEEECC Q ss_conf 9999999998389822453687406 Q gi|254781038|r 64 DILIKQTLLRANMQISDMDSIAVTA 88 (363) Q Consensus 64 ~~li~~~l~~a~~~~~~id~Iavt~ 88 (363) .+.++++|++++++++|||.|=..- T Consensus 27 v~Ai~klL~r~gl~~~Did~~EinE 51 (124) T d1afwa2 27 AYAIPKVLEATGLQVQDIDIFEINE 51 (124) T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECC T ss_pred HHHHHHHHHHCCCCCCCCCEEEECC T ss_conf 9899999998399956574898436 No 63 >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Probab=41.60 E-value=8.8 Score=15.44 Aligned_cols=25 Identities=24% Similarity=0.306 Sum_probs=19.9 Q ss_pred HHHHHHHHHHCCCCCCCCCEEEECC Q ss_conf 9999999998389822453687406 Q gi|254781038|r 64 DILIKQTLLRANMQISDMDSIAVTA 88 (363) Q Consensus 64 ~~li~~~l~~a~~~~~~id~Iavt~ 88 (363) .+.++++|++++++++|||.+=+.- T Consensus 25 v~A~~~lL~r~gl~~~Did~~EinE 49 (124) T d1m3ka2 25 IPASRKALERAGWKIGDLDLVEANE 49 (124) T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECC T ss_pred HHHHHHHHHHCCCCHHCCCHHHHCC T ss_conf 8778999998089830065777512 No 64 >d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]} Probab=39.66 E-value=6.6 Score=16.28 Aligned_cols=60 Identities=10% Similarity=0.000 Sum_probs=30.4 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH Q ss_conf 9969999999999838982245368740664301256779999999887514864333036776 Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGH 123 (363) Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH 123 (363) ++...|.|+.++++ +-++-=++...-..|.-...+| .-.|+.|+..++.++.-+....+. T Consensus 35 I~~~~pTI~~l~~~-~akvii~SH~GRPkg~~~~~Sl---~~v~~~l~~~l~~~v~~~~~~~~~ 94 (390) T d1v6sa_ 35 ILESLPTLRHLLAG-GASLVLLSHLGRPKGPDPKYSL---APVGEALRAHLPEARFAPFPPGSE 94 (390) T ss_dssp HHHHHHHHHHHHHT-TCEEEEECCCSCCSSCCGGGCS---HHHHHHHHHHCTTEEECCSCTTSH T ss_pred HHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCCCCH---HHHHHHHHHHCCCCEEEEECCCCC T ss_conf 99999999999978-9989999558999998976137---999999975246532653101122 No 65 >d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: 9823]} Probab=37.75 E-value=8.9 Score=15.40 Aligned_cols=24 Identities=13% Similarity=0.044 Sum_probs=15.5 Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHH Q ss_conf 999999887514864333036776 Q gi|254781038|r 100 LMTAKAISYVSHKPFYAINHLEGH 123 (363) Q Consensus 100 ~~~Ak~la~~~~~Pli~VnH~~aH 123 (363) .-.|+.|+..++.|+.=+.-..+. T Consensus 75 ~pva~~L~~~L~~~V~f~~d~~g~ 98 (413) T d1hdia_ 75 QPVAAELKSALGKAVLFLKDCVGP 98 (413) T ss_dssp HHHHHHHHHHHTSCCEECSCSSSH T ss_pred HHHHHHHHHHHCCCEEEECCCCHH T ss_conf 999999999868860660565135 No 66 >d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Probab=36.51 E-value=10 Score=14.92 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=37.0 Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH Q ss_conf 69999999999838982245368740664301256779999999887514864333036 Q gi|254781038|r 62 VLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHL 120 (363) Q Consensus 62 ~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~ 120 (363) ......+++|++++++.+|||.|-++..-+....-....-.++.|.. .+.+.+.+|+- T Consensus 64 ma~~Aa~~al~~ag~~~~dIdllI~~t~t~~~~~p~~A~~v~~~lg~-~~~~~~di~~~ 121 (184) T d1u6ea1 64 MATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGA-KGILGFDLSAG 121 (184) T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTC-TTSEEEEEECG T ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCC-CCCCCCEECCC T ss_conf 99999999988602674334189986326765442166664301245-74220100001 No 67 >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Probab=35.71 E-value=11 Score=14.83 Aligned_cols=57 Identities=7% Similarity=-0.048 Sum_probs=34.3 Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEEC-CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH Q ss_conf 9999999999838982245368740-6643012567799999998875148643330367 Q gi|254781038|r 63 LDILIKQTLLRANMQISDMDSIAVT-AGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLE 121 (363) Q Consensus 63 l~~li~~~l~~a~~~~~~id~Iavt-~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~ 121 (363) -....+++|++++++.+|||+|.+. ..|.+. .-......++.|... +.+.+-||+-- T Consensus 55 a~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~-~P~~a~~v~~~Lgl~-~~~~~di~~~C 112 (174) T d1hnja1 55 GFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAAC 112 (174) T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGG T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC-CCCHHHHHHHCCCCC-CHHHHHHHHHH T ss_conf 89999974442355512353899962785432-021012334226997-11022234301 No 68 >d1saza1 c.55.1.2 (A:1-172) butyrate kinase 2 {Thermotoga maritima [TaxId: 2336]} Probab=34.70 E-value=11 Score=14.72 Aligned_cols=142 Identities=13% Similarity=0.225 Sum_probs=69.7 Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE Q ss_conf 88468875026022077887338888418988731133462121871455999999996999999999983898224536 Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363) Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363) ||-||+-.-|| .+=.++++. +..+....+.-..+....+.-+ + .|.+.-..++.+.|++.++++++||+ T Consensus 2 mkILViN~GSS--SlK~alf~~---~~~~~~~~i~~~~~e~~~~~~i-~-----d~~~~~~~~i~~~L~~~~~~~~~i~a 70 (172) T d1saza1 2 FRILTINPGST--STKLSIFED---ERMVKMQNFSHSPDELGRFQKI-L-----DQLEFREKIARQFVEETGYSLSSFSA 70 (172) T ss_dssp CEEEEEEECSS--EEEEEEEET---TEEEEEEEEECCHHHHHTCSSG-G-----GGHHHHHHHHHHHHHTTTCCGGGCSE T ss_pred CEEEEECCCHH--HHEEEEEEC---CCCEEEEEEEECCCCCCCCCCC-C-----CHHHHHHHHHHHHHHHCCCCHHCCEE T ss_conf 77999867707--554789918---9705478778745323566765-4-----64999999999999976997422709 Q ss_pred EEECCCCC---HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEE Q ss_conf 87406643---012567799999998875148643330367765301322567998439997068747999837564300 Q gi|254781038|r 84 IAVTAGPG---LMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVAHYDR 160 (363) Q Consensus 84 Iavt~gPG---~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~~i 160 (363) |+--.+-| ..+.-+|--.+-..|.. ..|+-+-|.+.+ +.+..+...+.-| . . T Consensus 71 vghRvvhgg~~~~~~~~v~~~v~~~l~~--~~pl~~~~nl~~-i~a~~~~~~~~~p------------v-~--------- 125 (172) T d1saza1 71 FVSRGGLLDPIPGGVYLVDGLMIKTLKS--GKNGEHASNLGA-IIAHRFSSETGVP------------A-Y--------- 125 (172) T ss_dssp EEEECCSCSCBCSSEEECCHHHHHHHHH--TTTCCCTTHHHH-HHHHHHHHHHCCC------------E-E--------- T ss_pred EEECCCCCCCCCCCCEEECHHHHHHHHH--CCCCCCCCCHHH-HHHHHHHCCCCCC------------E-E--------- T ss_conf 9987627898789638989999999985--378888227899-9999964789999------------8-9--------- Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCC Q ss_conf 022336300238888988528876 Q gi|254781038|r 161 LGTTIDDALGECFDKIAKSLGLPY 184 (363) Q Consensus 161 lg~T~Dda~Ge~~DK~ar~Lgl~y 184 (363) ..|-+.=+-+...||+-|||| T Consensus 126 ---vfDtafh~t~p~~A~~y~lP~ 146 (172) T d1saza1 126 ---VVDPVVVDEMEDVARVSGHPN 146 (172) T ss_dssp ---EESCTTBCCCCGGGTBCSSTT T ss_pred ---EECCCCCCCCCHHHHHHCCCC T ss_conf ---966863236669999818997 No 69 >d1nbwa2 c.55.1.6 (A:2-91,A:257-405) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Probab=34.30 E-value=11 Score=14.68 Aligned_cols=72 Identities=18% Similarity=0.259 Sum_probs=47.5 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) ++|-|||-=...+++.+-+.++..-+|++.-.... .+-. |.+-. .+.+..-+++++++++++.++++.|. T Consensus 1 pii~glDIGtski~~~v~~~~~~~~~ilg~g~~~s---~GiK-G~I~n------i~~~~~aI~~av~~A~~~~~~i~~i~ 70 (239) T d1nbwa2 1 PLIAGIDIGNATTEVALASDYPQARAFVASGIVAT---TGMK-GTRDN------IAGTLAALEQALAKTPWSMSDVSRIY 70 (239) T ss_dssp CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEEC---CSST-TSGGG------HHHHHHHHHHHHTTSSCCGGGEEEEE T ss_pred CEEEEEECCCCEEEEEEEEECCCCEEEEEEEEECC---CCCC-CEEEC------HHHHHHHHHHHHHHHCCCCCCCEEEE T ss_conf 97999975777599999998699779999996168---8872-15987------99999999999998610311331899 Q ss_pred EC Q ss_conf 40 Q gi|254781038|r 86 VT 87 (363) Q Consensus 86 vt 87 (363) +. T Consensus 71 in 72 (239) T d1nbwa2 71 LN 72 (239) T ss_dssp EE T ss_pred EC T ss_conf 25 No 70 >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Probab=34.08 E-value=11 Score=14.66 Aligned_cols=58 Identities=17% Similarity=0.252 Sum_probs=38.4 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC----CCCCHHHHH Q ss_conf 96999999999983898224536874066430125677999999988751486----433303677 Q gi|254781038|r 61 DVLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKP----FYAINHLEG 122 (363) Q Consensus 61 ~~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~P----li~VnH~~a 122 (363) +.....++++|++++++.++||.+-+...-.-.. |.+.|+..++..+.| -+-||..-+ T Consensus 29 dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~----~~n~ar~~al~aglp~~vpa~tv~~~C~ 90 (268) T d1m3ka1 29 ELGATVISAVLERAGVAAGEVNEVILGQVLPAGE----GQNPARQAAMKAGVPQEATAWGMNQLAG 90 (268) T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS----CSCHHHHHHHHTTCCTTSEEEEEECGGG T ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCC----CHHHHHHHHHHHCCCCCCCCEEECCCCC T ss_conf 9999999999987199989976899960544574----1578719999828765433113656576 No 71 >d1jiha2 e.8.1.7 (A:1-389) DNA polymerase eta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=33.32 E-value=7.8 Score=15.79 Aligned_cols=56 Identities=9% Similarity=-0.002 Sum_probs=36.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC Q ss_conf 68899999999999999999999999876214455236541334587999999999998689889962 Q gi|254781038|r 240 IADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAP 307 (363) Q Consensus 240 ~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P 307 (363) ..|++..+ ...|+.++++.+... -.+-++-|+|.|+.|-+.-..+.+..|..++.| T Consensus 233 ~~d~~l~~----g~~ia~~IR~~I~~e--------tGlt~S~GIa~NK~LAKlAs~~~KPngqtvl~~ 288 (389) T d1jiha2 233 WDDVILAL----GSQVCKGIRDSIKDI--------LGYTTSCGLSSTKNVCKLASNYKKPDAQTIVKN 288 (389) T ss_dssp HHHHHHHH----HHHHHHHHHHHHHHH--------HCCCCEEEEESSHHHHHHHHTTTCSSCEEECCG T ss_pred HHHHHHHH----HHHHHHHHHHHHHHH--------HCCCCEECCCCCHHHHHHHHHHCCCCCEEEECH T ss_conf 56654028----999999999999998--------699843024552899999887449885586678 No 72 >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Probab=33.22 E-value=12 Score=14.57 Aligned_cols=62 Identities=18% Similarity=0.107 Sum_probs=41.0 Q ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC Q ss_conf 9999999998389822453687406643012567799999998875148643330367765301 Q gi|254781038|r 64 DILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLEGHILTA 127 (363) Q Consensus 64 ~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~ 127 (363) ...++++|++++++.+|||.| -+-|+|-.-+=.+-...-+. .+.-++|+-.+--+.||.+.+ T Consensus 29 ~~~~~~al~~a~l~p~~i~~v-~aHgtgT~~~D~~E~~ai~~-~fg~~~~v~s~Ks~iGH~~~a 90 (158) T d1ox0a2 29 IKAIKLALEEAEISPEQVAYV-NAHGTSTPANEKGESGAIVA-VLGKEVPVSSTKSFTGHLLGA 90 (158) T ss_dssp HHHHHHHHHHHTCCGGGCCCE-ECCCCSCHHHHHHHHHHHHH-HHCSSSEEECTHHHHCBCGGG T ss_pred HHHHHHHHCCCCCCCEEEEEE-EEECCCCCCCHHHHHHHHHH-HCCCCCCCCCCCCCCCCCHHH T ss_conf 999997441044365035677-53025422211577779998-529866676760022310455 No 73 >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Probab=32.43 E-value=12 Score=14.48 Aligned_cols=53 Identities=13% Similarity=0.104 Sum_probs=30.3 Q ss_pred HHHHHHHHHHCCCCCCCCCEEEE-CCCCCH-HHHHHHHHHHHHHHHHHHCCCCCCCHHH Q ss_conf 99999999983898224536874-066430-1256779999999887514864333036 Q gi|254781038|r 64 DILIKQTLLRANMQISDMDSIAV-TAGPGL-MGGLIVGLMTAKAISYVSHKPFYAINHL 120 (363) Q Consensus 64 ~~li~~~l~~a~~~~~~id~Iav-t~gPG~-~~~L~vG~~~Ak~la~~~~~Pli~VnH~ 120 (363) ....+++|++++++.+|||.|-+ |.-|.+ +++. ....++.|. .+.+.+.||.. T Consensus 54 ~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~--a~~v~~~Lg--~~~~~~di~~~ 108 (172) T d1ub7a1 54 FKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDT--AALVQARFG--LKAFAYDLLAG 108 (172) T ss_dssp HHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCH--HHHHHHHTT--CCCEEEEEECS T ss_pred HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCH--HHHHHHHHC--CCCCCEEEHHC T ss_conf 88888788662764322118999514665233565--999988750--67621400302 No 74 >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Probab=31.94 E-value=12 Score=14.43 Aligned_cols=25 Identities=24% Similarity=0.377 Sum_probs=17.8 Q ss_pred HHHHHHHHHHCCCCCCCCCEEEECC Q ss_conf 9999999998389822453687406 Q gi|254781038|r 64 DILIKQTLLRANMQISDMDSIAVTA 88 (363) Q Consensus 64 ~~li~~~l~~a~~~~~~id~Iavt~ 88 (363) .+.++++|++++++++|||.+-..- T Consensus 26 ~~A~~klL~ragl~~~did~~EinE 50 (128) T d1wdkc2 26 VPATQKALKRAGLNMADIDFIELNE 50 (128) T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECC T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEC T ss_conf 8789877641475524451677501 No 75 >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Probab=30.26 E-value=13 Score=14.24 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=17.0 Q ss_pred HHHHHHHHHCCCCCCCCCEEEEC Q ss_conf 99999999838982245368740 Q gi|254781038|r 65 ILIKQTLLRANMQISDMDSIAVT 87 (363) Q Consensus 65 ~li~~~l~~a~~~~~~id~Iavt 87 (363) +.++++|++++++++|||.+=.. T Consensus 25 ~A~~~~L~r~gl~~~Did~~Ein 47 (125) T d1ulqa2 25 PATRKALERAGLSFSDLGLIELN 47 (125) T ss_dssp HHHHHHHHHTTCCGGGCSEEEEC T ss_pred HHHHHHHHCCCCCCCCCCHHEEC T ss_conf 88876752068673434210001 No 76 >d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Probab=29.92 E-value=13 Score=14.20 Aligned_cols=17 Identities=12% Similarity=0.161 Sum_probs=13.0 Q ss_pred HHHHHHHHHHHCCCCCC Q ss_conf 99999988751486433 Q gi|254781038|r 100 LMTAKAISYVSHKPFYA 116 (363) Q Consensus 100 ~~~Ak~la~~~~~Pli~ 116 (363) ....+.|+..+++|++. T Consensus 36 ~~~l~~lae~~~iPv~~ 52 (177) T d2ihta1 36 VPAIRALAERLNIPVIT 52 (177) T ss_dssp HHHHHHHHHHHTCCEEE T ss_pred HHHHHHHHHCCEEEEEE T ss_conf 99999975315589996 No 77 >d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Probab=28.62 E-value=14 Score=14.05 Aligned_cols=18 Identities=6% Similarity=-0.134 Sum_probs=13.1 Q ss_pred HHHHHHHHHHHCCCCCCC Q ss_conf 999999887514864333 Q gi|254781038|r 100 LMTAKAISYVSHKPFYAI 117 (363) Q Consensus 100 ~~~Ak~la~~~~~Pli~V 117 (363) ......|+-.+++|++.. T Consensus 39 ~~~l~~lae~~~~Pv~tt 56 (175) T d1zpda1 39 EEAAVKFTDALGGAVATM 56 (175) T ss_dssp HHHHHHHHHHHCCCEEEE T ss_pred HHHHHHHHHHHCEEEEEC T ss_conf 999999998623457962 No 78 >d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=27.75 E-value=14 Score=13.95 Aligned_cols=19 Identities=21% Similarity=0.169 Sum_probs=13.8 Q ss_pred HHHHHHHHHHHHCCCCCCC Q ss_conf 9999999887514864333 Q gi|254781038|r 99 GLMTAKAISYVSHKPFYAI 117 (363) Q Consensus 99 G~~~Ak~la~~~~~Pli~V 117 (363) +....+.|+-.+++|++.. T Consensus 27 a~~~l~~lae~~g~Pv~tt 45 (171) T d1t9ba1 27 GPRLLKELSDRAQIPVTTT 45 (171) T ss_dssp HHHHHHHHHHHTTCCEEEC T ss_pred HHHHHHHHHHHCCCCEEEC T ss_conf 8999999999569755401 No 79 >d3buxb2 a.48.1.1 (B:48-177) N-terminal domain of cbl (N-cbl) {Human (Homo sapiens) [TaxId: 9606]} Probab=27.66 E-value=11 Score=14.81 Aligned_cols=61 Identities=18% Similarity=0.249 Sum_probs=38.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC-----CCEEEECCHHHCCC Q ss_conf 99999999999999999999987621445523654133458799999999999868-----98899628788772 Q gi|254781038|r 245 ASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLH-----GFRFVAPPARLCTD 314 (363) Q Consensus 245 asfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~-----~~~~~~P~~~~ctD 314 (363) ..|-..-.+.|..|+++++..++...+. +. --|+..|..|.++.-.. .++..||.-.||.| T Consensus 65 ~ey~~iyl~nL~~K~kq~i~LFK~~kek-----mf----de~S~~Rr~LtKLsLiFSHMlaelkalfP~g~~~gd 130 (130) T d3buxb2 65 NEYFRVFMENLMKKTKQTISLFKEGKER-----MY----EENSQPRRNLTKLSLIFSHMLAELKGIFPSGLFQGD 130 (130) T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHGGG-----GG----STTCHHHHHHHHHHHHHHHHHHHHHHHSGGGSCCGG T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH----CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 2599999999999999999998863576-----63----122088887689999999999999975889811789 No 80 >d1ygpa_ c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=27.34 E-value=15 Score=13.90 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=36.7 Q ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHH-HHHHHHHHHHHHHCCCCCCCH Q ss_conf 9999999998389822453687406643012567-799999998875148643330 Q gi|254781038|r 64 DILIKQTLLRANMQISDMDSIAVTAGPGLMGGLI-VGLMTAKAISYVSHKPFYAIN 118 (363) Q Consensus 64 ~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~-vG~~~Ak~la~~~~~Pli~Vn 118 (363) ...++++|++.|+++++|-..-.-.|=|.. ||- -...+-|++|- +++|++||- T Consensus 132 ~e~~~~~l~~lg~~~~~i~~~E~da~LGnG-GLGrLAg~~LdS~Ad-L~lP~vG~G 185 (876) T d1ygpa_ 132 REMIKGALDELGFKLEDVLDQEPDAGLGNG-GLGRLAACFVDSMAT-EGIPAWGYG 185 (876) T ss_dssp HHHHHHHHHHHTCCHHHHHTTCCCBCSCCS-HHHHHHHHHHHHHHH-TTCCEEEEE T ss_pred HHHHHHHHHHCCCCHHHHHHCCCCCCCCCC-HHHHHHHHHHHHHHH-CCCCEEEEE T ss_conf 799999999809999999854868677873-189999999999986-898859997 No 81 >d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Probab=27.22 E-value=15 Score=13.89 Aligned_cols=35 Identities=6% Similarity=-0.054 Sum_probs=18.7 Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHH Q ss_conf 36541334587999999999998689889962878 Q gi|254781038|r 276 VLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPAR 310 (363) Q Consensus 276 ~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~~ 310 (363) -++++|+=+...-..+.++++.++.+++++-.+.. T Consensus 32 P~il~G~gv~~~~a~~~l~~l~e~~~iPv~tt~~g 66 (161) T d1ovma1 32 TALLADFLVLRHGLKHALQKWVKEVPMAHATMLMG 66 (161) T ss_dssp EEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGGG T ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCC T ss_conf 68998959375506999999999649659984776 No 82 >d1ftra2 d.58.33.1 (A:149-296) Formylmethanofuran:tetrahydromethanopterin formyltransferase {Archaeon Methanopyrus kandleri [TaxId: 2320]} Probab=26.51 E-value=14 Score=14.04 Aligned_cols=54 Identities=19% Similarity=0.418 Sum_probs=28.8 Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCCCCCCCCCCHHCCC Q ss_conf 64300022336300238888988528-----876103556665540573334586111068 Q gi|254781038|r 156 AHYDRLGTTIDDALGECFDKIAKSLG-----LPYPGGVEIEKAALMGDGKRFKFPCPLVQG 211 (363) Q Consensus 156 ~~~~ilg~T~Dda~Ge~~DK~ar~Lg-----l~yPgGp~ie~~A~~g~~~~~~~P~p~~~~ 211 (363) +++-++|+|.+.+.--+-.-+..+-. +|||||- +-.-++-|+ ++|++-.+-.+. T Consensus 19 GNflil~~~~~~aL~Aae~AV~Ai~~v~gvI~PFPGGi-VrSGSKVGS-k~Yk~l~ASTN~ 77 (148) T d1ftra2 19 GNFYIMAESQPAGLQAAEAAVDAIKGVEGAYAPFPGGI-VASASKVGS-KQYDFLPASTND 77 (148) T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHTTSTTEECCSGGGC-BSSCEEESC-SSCTTCSEEECG T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCC-EECCCCCCC-CCCCCCCCCCCC T ss_conf 04899978989999999999999984899164079972-533775786-666756565464 No 83 >d2w6ka1 c.151.1.1 (A:1-139) Cobalamin biosynthesis protein CobE {Pseudomonas aeruginosa [TaxId: 287]} Probab=26.39 E-value=15 Score=13.79 Aligned_cols=50 Identities=22% Similarity=0.453 Sum_probs=37.6 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCC----CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH Q ss_conf 996999999999983898224536874066----4301256779999999887514864333036 Q gi|254781038|r 60 VDVLDILIKQTLLRANMQISDMDSIAVTAG----PGLMGGLIVGLMTAKAISYVSHKPFYAINHL 120 (363) Q Consensus 60 ~~~l~~li~~~l~~a~~~~~~id~Iavt~g----PG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~ 120 (363) .+.+...++++|.+.++....|+.||.-.- ||+ ..++..+++|++.+.-- T Consensus 21 ~e~i~~ai~~al~~~~l~~~~i~~iASid~K~dE~gl-----------~e~a~~l~~pl~~~~~e 74 (139) T d2w6ka1 21 AEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGL-----------RQLATLLERPVHFLAPA 74 (139) T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHH-----------HHHHHHHTSCEEEECHH T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCHHH-----------HHHHHHHCCCEEEECHH T ss_conf 9999999999999849997880321532105788999-----------99999949985997899 No 84 >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Probab=25.09 E-value=16 Score=13.63 Aligned_cols=65 Identities=22% Similarity=0.260 Sum_probs=43.3 Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHH-HHHHHH-HHHCCCCCCCHHHHHHHHCC Q ss_conf 6999999999983898224536874066430125677999-999988-75148643330367765301 Q gi|254781038|r 62 VLDILIKQTLLRANMQISDMDSIAVTAGPGLMGGLIVGLM-TAKAIS-YVSHKPFYAINHLEGHILTA 127 (363) Q Consensus 62 ~l~~li~~~l~~a~~~~~~id~Iavt~gPG~~~~L~vG~~-~Ak~la-~~~~~Pli~VnH~~aH~~~~ 127 (363) .....++++|.+++++.+||+.|- +-|.|-.-+=.+=+. ..+.+. ....+|+-.+--+.||.+.+ T Consensus 66 ~~~~~~~~al~~a~i~~~~i~~ie-~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~A 132 (205) T d1tqya2 66 EMAETIRVALDESRTDATDIDYIN-AHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGA 132 (205) T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEE-CCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTT T ss_pred CCCHHHHHHHHHHCCCCCCEEEEE-CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC T ss_conf 310345667763057932045552-1234534572367777777624466776355000354554345 No 85 >d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Probab=25.08 E-value=16 Score=13.63 Aligned_cols=96 Identities=25% Similarity=0.331 Sum_probs=51.3 Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687 Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363) Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363) |.|++||=---...++++ |.+++++....... |+ +.+.+...+.+.+.+ .++.+|+ T Consensus 1 M~i~~iDiGgT~i~~~l~---d~~g~i~~~~~~~t-----------~~-----~~~~~~~~i~~~~~~-----~~i~gIG 56 (114) T d2gupa1 1 MTIATIDIGGTGIKFASL---TPDGKILDKTSIST-----------PE-----NLEDLLAWLDQRLSE-----QDYSGIA 56 (114) T ss_dssp CCEEEEEEETTEEEEEEE---CTTCCEEEEEEECC-----------CS-----SHHHHHHHHHHHHTT-----SCCSEEE T ss_pred CEEEEEEECCCCEEEEEE---CCCCCEEEEEEECC-----------CC-----CHHHHHHHHHHHHHH-----CCCCEEE T ss_conf 969999968103999999---09997999999714-----------35-----599999999998611-----4453599 Q ss_pred ECC-CC-----CH---HHH--HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC Q ss_conf 406-64-----30---125--6779999999887514864333036776530 Q gi|254781038|r 86 VTA-GP-----GL---MGG--LIVGLMTAKAISYVSHKPFYAINHLEGHILT 126 (363) Q Consensus 86 vt~-gP-----G~---~~~--L~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~ 126 (363) ++. || |. .+. ..-+....+-+. .+++|++=-|-.-+-+++ T Consensus 57 i~~pG~vd~~~g~i~~~~~l~~~~~~~l~~~l~-~~~~pV~veNDanaaalg 107 (114) T d2gupa1 57 MSVPGAVNQETGVIDGFSAVPYIHGFSWYEALS-SYQLPVHLENDANCVGLS 107 (114) T ss_dssp EEESSEECTTTCBEESCCSSGGGSSSBHHHHTG-GGCCCEEEEEHHHHHHHH T ss_pred EECCCCCCCCCCEEECCCCCCCCCCCCHHHHHH-HCCCCEEEEHHHHHHHHH T ss_conf 965665357753897444567545883799998-679979997199999999 No 86 >d1m5sa2 d.58.33.1 (A:146-297) Formylmethanofuran:tetrahydromethanopterin formyltransferase {Archaeon Methanosarcina barkeri [TaxId: 2208]} Probab=24.86 E-value=16 Score=13.70 Aligned_cols=54 Identities=20% Similarity=0.423 Sum_probs=28.2 Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHC---C--CCCCHHHHHHHHHHHCCCCCCCCCCHHCCC Q ss_conf 6430002233630023888898852---8--876103556665540573334586111068 Q gi|254781038|r 156 AHYDRLGTTIDDALGECFDKIAKSL---G--LPYPGGVEIEKAALMGDGKRFKFPCPLVQG 211 (363) Q Consensus 156 ~~~~ilg~T~Dda~Ge~~DK~ar~L---g--l~yPgGp~ie~~A~~g~~~~~~~P~p~~~~ 211 (363) +++-++|++.+.+.--|-.-+.-+- | +|||||- +-.=.+-|. ++|++-.+-.+. T Consensus 19 GNflil~~~~~~aL~AaeaAV~Ai~~v~gvI~PFPGGi-VrSGSKVGs-~kYk~l~ASTNd 77 (152) T d1m5sa2 19 GNFFIFGDSQMTALTAAEAAVDTIAELEGTITPFPGGI-VASGSKSGA-NKYKFLKATANE 77 (152) T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHTTSTTEECCSGGGC-BSSCCBSSC-SSCTTCSCBCCG T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCC-CCCCCCCCC-CCCCCCCCCCCC T ss_conf 04899978989999999999999983899053188861-045775673-336766575566 No 87 >d1im4a_ e.8.1.7 (A:) DinB homolog (DBH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Probab=24.72 E-value=15 Score=13.91 Aligned_cols=31 Identities=26% Similarity=0.456 Sum_probs=24.8 Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC Q ss_conf 6541334587999999999998689889962 Q gi|254781038|r 277 LVVSGGVASNHFIRASLIDLCVLHGFRFVAP 307 (363) Q Consensus 277 lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P 307 (363) +-++-|+|.|+.|-+...+..+..|+.++.| T Consensus 143 l~~SiGIa~nk~lAKias~~~KP~g~~~i~~ 173 (209) T d1im4a_ 143 ITVTVGVAPNKILAKIIADKSKPNGLGVIRP 173 (209) T ss_dssp CCEEEEEESSHHHHHHHHHHTCSSCEEECCG T ss_pred CCEEECCCCCHHHHHHHHHCCCCCEEEEECH T ss_conf 7554430341565898886269856888889 No 88 >d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Probab=24.50 E-value=17 Score=13.56 Aligned_cols=44 Identities=14% Similarity=0.237 Sum_probs=29.9 Q ss_pred CEEEEEECCCEEEEEECC-CCC-CEECCCCCCCCHHHHHHHHHHHC Q ss_conf 439997068747999837-564-30002233630023888898852 Q gi|254781038|r 137 YLVLLVSGGHTQILLVRD-VAH-YDRLGTTIDDALGECFDKIAKSL 180 (363) Q Consensus 137 fL~LlvSGGhT~l~~~~~-~~~-~~ilg~T~Dda~Ge~~DK~ar~L 180 (363) .|.+=+=||+|.++.++. ... .+.+..+.+....++.+.+++.+ T Consensus 8 ~lviDIG~gTtDi~v~~~~~~~~~~~~~~~~~~g~~~i~~~i~~~i 53 (161) T d2fsja1 8 GVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKI 53 (161) T ss_dssp EEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHH T ss_pred EEEEECCCCEEEEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHH T ss_conf 7999829590898999789848998874637677999999999999 No 89 >d1m5ha2 d.58.33.1 (A:146-297) Formylmethanofuran:tetrahydromethanopterin formyltransferase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=23.31 E-value=16 Score=13.63 Aligned_cols=55 Identities=24% Similarity=0.500 Sum_probs=27.8 Q ss_pred CCCEECCCCCCCCHHHH---HHHHHHHCC--CCCCHHHHHHHHHHHCCCCCCCCCCHHCCCC Q ss_conf 64300022336300238---888988528--8761035566655405733345861110688 Q gi|254781038|r 156 AHYDRLGTTIDDALGEC---FDKIAKSLG--LPYPGGVEIEKAALMGDGKRFKFPCPLVQGT 212 (363) Q Consensus 156 ~~~~ilg~T~Dda~Ge~---~DK~ar~Lg--l~yPgGp~ie~~A~~g~~~~~~~P~p~~~~~ 212 (363) +++-++|+|.+.+.--| .|...+.=| +|||||- +-.=.+-| .++|++-.+-.+.. T Consensus 19 GNflil~~~~~~aL~AaeaAV~Ai~~v~gvI~PFPGGi-vrSGSKVG-sskYk~l~ASTN~a 78 (152) T d1m5ha2 19 GNFFIMAETQPSALAAAKAAVDAISDVEGVITPFPGGI-VASGSKVG-ANKYKFLKASTNEK 78 (152) T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHTSTTEECCSGGGC-BSSCCBSS-CSSCTTCSCBCCGG T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCC-CCCCCCCCCCCCCC T ss_conf 04899978989999999999999983799402588750-04577567-33367765764646 No 90 >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Probab=22.70 E-value=18 Score=13.33 Aligned_cols=52 Identities=15% Similarity=0.289 Sum_probs=33.8 Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEECCCCCHH-HHH-HHHHHHHHHHHHHHCCCCCCC Q ss_conf 9999999999838982245368740664301-256-779999999887514864333 Q gi|254781038|r 63 LDILIKQTLLRANMQISDMDSIAVTAGPGLM-GGL-IVGLMTAKAISYVSHKPFYAI 117 (363) Q Consensus 63 l~~li~~~l~~a~~~~~~id~Iavt~gPG~~-~~L-~vG~~~Ak~la~~~~~Pli~V 117 (363) +-..++++|++-|+++++|-.. -.-|||. ||| +-...+-|++|- +++|++|| T Consensus 93 ~~~~~~~al~~~g~~l~~i~~~--E~da~LGnGGLGrLAgd~LkSaAd-LglP~~G~ 146 (824) T d2gj4a1 93 LENACDEATYQLGLDMEELEEI--EEDAGLGNGGLGRLAACFLDSMAT-LGLAAYGY 146 (824) T ss_dssp CHHHHHHHHHHTTCCHHHHHTT--SCCEEECCSHHHHHHHHHHHHHHH-TTCCEEEE T ss_pred CHHHHHHHHHHCCCCHHHHHHC--CCCCCCCCCCHHHHHHHHHHHHHH-CCCCEEEE T ss_conf 7899999999809999999853--778778885189999999999986-89896999 No 91 >d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Probab=22.57 E-value=18 Score=13.31 Aligned_cols=41 Identities=12% Similarity=0.170 Sum_probs=28.1 Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH Q ss_conf 22453687406643012567799999998875148643330 Q gi|254781038|r 78 ISDMDSIAVTAGPGLMGGLIVGLMTAKAISYVSHKPFYAIN 118 (363) Q Consensus 78 ~~~id~Iavt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~Vn 118 (363) +.++|+|-++-||+...--.--...........++|++||- T Consensus 40 ~~~~dgiIl~Gg~~~~~~~~~~~~~l~~~~~~~~~PilGIC 80 (196) T d2a9va1 40 LDGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGIC 80 (196) T ss_dssp GTTCSEEEEEEECSCGGGTGGGHHHHHHHHHHCCSCEEEET T ss_pred HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE T ss_conf 72688079933653111021024557777752581589760 No 92 >d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=21.50 E-value=19 Score=13.17 Aligned_cols=18 Identities=11% Similarity=0.183 Sum_probs=13.6 Q ss_pred HHHHHHHHHHHCCCCCCC Q ss_conf 999999887514864333 Q gi|254781038|r 100 LMTAKAISYVSHKPFYAI 117 (363) Q Consensus 100 ~~~Ak~la~~~~~Pli~V 117 (363) ....+.|+-.+++|++.. T Consensus 47 ~~~l~~lae~~~~Pv~tt 64 (179) T d1pvda1 47 KAETKKLIDLTQFPAFVT 64 (179) T ss_dssp HHHHHHHHHHHCCCEEEC T ss_pred HHHHHHHHHHHCCEEEEC T ss_conf 799999999627538854 No 93 >d1zeta2 e.8.1.7 (A:27-299) DNA polymerase iota {Human (Homo sapiens) [TaxId: 9606]} Probab=21.21 E-value=18 Score=13.25 Aligned_cols=48 Identities=17% Similarity=0.169 Sum_probs=27.3 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC Q ss_conf 99999999999999876214455236541334587999999999998689889962 Q gi|254781038|r 252 VRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAP 307 (363) Q Consensus 252 ~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P 307 (363) ...+..++++.+... -.+-++-|+|.|+.|-+.-..+.+..|..++.| T Consensus 150 ~~~~a~~ir~~I~~~--------~g~~~svGIa~nk~lAKlAs~~~KP~g~~vi~~ 197 (273) T d1zeta2 150 GSQIAAEMREAMYNQ--------LGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLP 197 (273) T ss_dssp HHHHHHHHHHHHHHH--------HCCCEEEEEESSHHHHHHHHTSSCSSCEEECCG T ss_pred HHHHHHHHHHHHHHH--------HCCCEEEEECCCHHHHHHHHHCCCCCCCCCHHH T ss_conf 999999999999998--------599758614672899998765024431021033 No 94 >d1f8ya_ c.23.14.1 (A:) Nucleoside 2-deoxyribosyltransferase {Lactobacillus leichmannii [TaxId: 28039]} Probab=20.68 E-value=9.4 Score=15.26 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=28.6 Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCC Q ss_conf 77999999988751486433303677653013225679984399970687479998375643 Q gi|254781038|r 97 IVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVRDVAHY 158 (363) Q Consensus 97 ~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~~~~~~ 158 (363) -.|..+--+.|++++||++.+..- .....| +.|.+.|+++.+.-+.+..+| T Consensus 91 D~Gta~EiG~A~a~gKpvi~~~~~----------~~~~~~-~nlM~~~~~~~~~~~~eL~~y 141 (156) T d1f8ya_ 91 DVGLGMELGYALSQGKYVLLVIPD----------EDYGKP-INLMSWGVSDNVIKMSQLKDF 141 (156) T ss_dssp CHHHHHHHHHHHHTTCEEEEEECG----------GGTTSC-BCHHHHHHCSEEEEGGGTTTC T ss_pred CCCHHHHHHHHHHCCCCEEEEECC----------CCCCCC-EEHHHHHHHHHCCCHHHHHHH T ss_conf 877899999999869938999627----------745772-118987666541989999873 No 95 >d1gnla_ e.26.1.1 (A:) Hybrid cluster protein (prismane protein) {Desulfovibrio desulfuricans [TaxId: 876]} Probab=20.50 E-value=20 Score=13.03 Aligned_cols=41 Identities=27% Similarity=0.379 Sum_probs=27.5 Q ss_pred HHCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCC Q ss_conf 8877258999999999998499-98876200235787875775 Q gi|254781038|r 310 RLCTDNAVMIAWAALERMEAGL-PADDLSISPRSRWPLDEKAP 351 (363) Q Consensus 310 ~~ctDNAaMIA~ag~~~~~~g~-~~~~~~~~~~~rw~ld~~a~ 351 (363) .=|.||+-++..+.-..=..|. ...++-+...+-| ++|+|. T Consensus 450 G~C~D~~r~~~ia~~lA~~~~~~di~dLPl~~~~~W-~eqKAv 491 (543) T d1gnla_ 450 GQCNDSYSLAVIALKLKEVFGLEDVNDLPIVYNIAW-YEQKAV 491 (543) T ss_dssp CSGGGHHHHHHHHHHHHHHTTCSCGGGSSEEEEEEC-CSHHHH T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECHH-HHHHHH T ss_conf 056437999999999999739997354764444016-779999 No 96 >d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]} Probab=20.49 E-value=20 Score=13.03 Aligned_cols=15 Identities=0% Similarity=-0.084 Sum_probs=6.8 Q ss_pred HHHHHHHHHHHHCCC Q ss_conf 999999999986898 Q gi|254781038|r 288 FIRASLIDLCVLHGF 302 (363) Q Consensus 288 ~LR~~l~~~~~~~~~ 302 (363) +|-+++++.++++|+ T Consensus 16 ~l~~km~~~a~~~~~ 30 (103) T d1iiba_ 16 LLVSKMRAQAEKYEV 30 (103) T ss_dssp HHHHHHHHHHHHTTC T ss_pred HHHHHHHHHHHHCCC T ss_conf 999999999998699 No 97 >d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Probab=20.39 E-value=20 Score=13.01 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=24.0 Q ss_pred EHHHHHHHHHHHHHHHHHHHCCCEEEECC-HHHCCCHHHH Q ss_conf 13345879999999999986898899628-7887725899 Q gi|254781038|r 280 SGGVASNHFIRASLIDLCVLHGFRFVAPP-ARLCTDNAVM 318 (363) Q Consensus 280 ~GGVaaN~~LR~~l~~~~~~~~~~~~~P~-~~~ctDNAaM 318 (363) ++|+ .|..+++.|.+.+++.++++..-. +.++||=+++ T Consensus 148 ~~~~-~~~~l~~~l~~~A~~~~I~~Q~~v~~~ggTDa~~~ 186 (233) T d2grea2 148 SSGP-YHYALRKHLVELAKTNHIEYKVDIYPYYGSDASAA 186 (233) T ss_dssp TTEE-CCHHHHHHHHHHHHHHTCCEEEEECSCC------- T ss_pred CCCC-CCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHH T ss_conf 7665-69999999999999839985796248878659999 No 98 >d1jx4a2 e.8.1.7 (A:1-240) DinB homolog (DBH) {Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]} Probab=20.29 E-value=20 Score=13.00 Aligned_cols=29 Identities=17% Similarity=0.400 Sum_probs=21.6 Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHCCCEEE Q ss_conf 65413345879999999999986898899 Q gi|254781038|r 277 LVVSGGVASNHFIRASLIDLCVLHGFRFV 305 (363) Q Consensus 277 lvv~GGVaaN~~LR~~l~~~~~~~~~~~~ 305 (363) +-++-||+.|..+-+...+..+..|+.++ T Consensus 138 ~~~siGia~nk~lAKlAs~~~KP~g~~vi 166 (240) T d1jx4a2 138 ITVTVGISKNKVFAKIAADMAKPNGIKVI 166 (240) T ss_dssp CCEEEEEESSHHHHHHHHHHHCSSCEEEC T ss_pred CCCCEEECCHHHHHHHHHHHCCCCEEEEC T ss_conf 53101341316688887500466235303 Done!