HHsearch alignment for GI: 254781039 and conserved domain: COG0287
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism].
Probab=98.86 E-value=1.8e-08 Score=74.85 Aligned_cols=160 Identities=19% Similarity=0.210 Sum_probs=94.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC-HHHHHHHHHHHCC
Q ss_conf 887799977887899999999977998189994498999999977898422798817874389731-6877555544112
Q gi|254781039|r 3 NYSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSD-HTLLQNADIVLFA 81 (329)
Q Consensus 3 ~~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~-~~~l~~adiIiia 81 (329)
T Consensus 2 ~~~~v~IvG~GliG~s~a~~l~~~g-~~v~i~g~d~~~~~~~~a~~l------gv~--d~~-~~~~~~~~~~~aDlViva 71 (279)
T COG0287 2 ASMKVGIVGLGLMGGSLARALKEAG-LVVRIIGRDRSAATLKAALEL------GVI--DEL-TVAGLAEAAAEADLVIVA 71 (279)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEECCCCCHHHHHHHHHC------CCC--HHH-CCCHHHHHCCCCCEEEEE
T ss_conf 8648999877467799999999769-847997247746778776635------853--010-011555413569989995
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEE----CCCCC-HHHHHHHHHHHHCCCCC
Q ss_conf 21777666555533203568505523752000258543101233210012100----12888-17899876532124677
Q gi|254781039|r 82 TSSKGYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVLPSHSISV----LSGPG-FARDIAQGLPVGVILSS 156 (329)
Q Consensus 82 vps~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~~~~~v----lsGPs-~A~Eia~~~pt~~~ia~ 156 (329)
T Consensus 72 vPi~~~~~~l~~l~~~l~~g~iv~Dv~-----S~K~~v~~a~~~~~~~~~~~vg~HPM~G~~~~~-~lf~~~~~vltp~~ 145 (279)
T COG0287 72 VPIEATEEVLKELAPHLKKGAIVTDVG-----SVKSSVVEAMEKYLPGDVRFVGGHPMFGPEADA-GLFENAVVVLTPSE 145 (279)
T ss_pred CCHHHHHHHHHHHCCCCCCCCEEECCC-----CHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC-CCCCCCEEEEECCC
T ss_conf 778899999998630379998897364-----201789999997466777078218999874311-23379679994799
Q ss_pred -CHHHHHHHHHHHHCCCCEEEEE
Q ss_conf -3178999999753411138997
Q gi|254781039|r 157 -KNIDISRRLSKILTTDSFRVYC 178 (329)
Q Consensus 157 -~d~~~~~~i~~~~~~~~~~~~~ 178 (329)
T Consensus 146 ~~~~~~~~~~~~~~~~~ga~~v~ 168 (279)
T COG0287 146 GTEKEWVEEVKRLWEALGARLVE 168 (279)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 98789999999999974988998