HHsearch alignment for GI: 254781039 and conserved domain: COG0569

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].
Probab=97.31  E-value=0.00041  Score=46.46  Aligned_cols=130  Identities=19%  Similarity=0.313  Sum_probs=76.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEE-EECHHH-----HHHHHHH
Q ss_conf             7799977887899999999977998189994498999999977898422798817874389-731687-----7555544
Q gi|254781039|r    5 STIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNF-SSDHTL-----LQNADIV   78 (329)
Q Consensus         5 ~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~-t~~~~~-----l~~adiI   78 (329)
T Consensus         1 m~iiIiG~G~vG~~va~~L~~~g-~~Vv~Id~d~~~~~~~~~~~~~~~---------~v~gd~t~~~~L~~agi~~aD~v   70 (225)
T COG0569           1 MKIIIIGAGRVGRSVARELSEEG-HNVVLIDRDEERVEEFLADELDTH---------VVIGDATDEDVLEEAGIDDADAV   70 (225)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCEE---------EEEECCCCHHHHHHCCCCCCCEE
T ss_conf             98999898578899999998789-908999768899998632000449---------99926889899986798638999


Q ss_pred             HCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCCCH
Q ss_conf             11221777666555533203568505523752000258543101233210012100128881789987653212467731
Q gi|254781039|r   79 LFATSSKGYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVLPSHSISVLSGPGFARDIAQGLPVGVILSSKN  158 (329)
Q Consensus        79 iiavps~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~~~~~vlsGPs~A~Eia~~~pt~~~ia~~d  158 (329)
T Consensus        71 va~t~~d~~N~i~~~la~~~~gv~~vi---------------------------ar~~~~~~~~~~~~~--g~~~ii~Pe  121 (225)
T COG0569          71 VAATGNDEVNSVLALLALKEFGVPRVI---------------------------ARARNPEHEKVLEKL--GADVIISPE  121 (225)
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCCEEE---------------------------EEECCCHHHHHHHHC--CCCEEECHH
T ss_conf             998088679999999999873998499---------------------------995694167789867--994897558


Q ss_pred             HHHHHHHHHHHCCCC
Q ss_conf             789999997534111
Q gi|254781039|r  159 IDISRRLSKILTTDS  173 (329)
Q Consensus       159 ~~~~~~i~~~~~~~~  173 (329)
T Consensus       122 ~~~~~~l~~~i~~p~  136 (225)
T COG0569         122 KLAAKRLARLIVTPG  136 (225)
T ss_pred             HHHHHHHHHHHCCCC
T ss_conf             999999999853886