HHsearch alignment for GI: 254781039 and conserved domain: COG1064

Probab=94.24  E-value=0.45  Score=26.68  Aligned_cols=82  Identities=20%  Similarity=0.223  Sum_probs=52.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEE-E-CHHHHHH-HHHHHC
Q ss_conf             877999778878999999999779981899944989999999778984227988178743897-3-1687755-554411
Q gi|254781039|r    4 YSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFS-S-DHTLLQN-ADIVLF   80 (329)
Q Consensus         4 ~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t-~-~~~~l~~-adiIii   80 (329)
T Consensus       167 G~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~~K~e~a~~lGAd~~----------i~~~~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         167 GKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEEKLELAKKLGADHV----------INSSDSDALEAVKEIADAIID  235 (339)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCEE----------EECCCCHHHHHHHHHCCEEEE
T ss_conf             989999877489999999999869-969999578779999998488289----------976781166776734739999


Q ss_pred             CCCHHHHHHHHHHHHH
Q ss_conf             2217776665555332
Q gi|254781039|r   81 ATSSKGYGEALNFYSN   96 (329)
Q Consensus        81 avps~~~~~~l~~i~~   96 (329)
T Consensus       236 tv~~~~~~~~l~~l~~  251 (339)
T COG1064         236 TVGPATLEPSLKALRR  251 (339)
T ss_pred             CCCHHHHHHHHHHHHC
T ss_conf             8774559999998642