HHsearch alignment for GI: 254781039 and conserved domain: PRK00811
>PRK00811 spermidine synthase; Provisional.
Probab=92.29 E-value=0.91 Score=24.68 Aligned_cols=99 Identities=19% Similarity=0.293 Sum_probs=58.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCC---C-CCCEEEE-EC-HHHHH--
Q ss_conf 888779997788789999999997799818999449899999997789842279881---7-8743897-31-68775--
Q gi|254781039|r 2 KNYSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIK---L-SPLLNFS-SD-HTLLQ-- 73 (329)
Q Consensus 2 ~~~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~---l-~~~i~~t-~~-~~~l~-- 73 (329)
T Consensus 77 ~~pk~VLIiGGGDGg~~r-E~lkh~~v~~v~~VeiD~~Vi~~~~~------~lp~~~~~~~~dprv~~~~~Dg~~fv~~~ 149 (283)
T PRK00811 77 PNPKKVLIIGGGDGGTLR-EVLKHPSVEKITMVEIDERVVEMSRK------YLPEISGGAWDDPRVELVIGDGVKFVRET 149 (283)
T ss_pred CCCCEEEEECCCCHHHHH-HHHCCCCCCEEEEEECCHHHHHHHHH------HHHHHHHHHCCCCCEEEEHHHHHHHHHHC
T ss_conf 997748995687479999-98427885679999468999999999------83886313302971599827899999845
Q ss_pred --HHHHHHCCCCH-------HHHHHHHHHHHHHCCCCCCEEEC
Q ss_conf --55544112217-------77666555533203568505523
Q gi|254781039|r 74 --NADIVLFATSS-------KGYGEALNFYSNWLKESAEIIIC 107 (329)
Q Consensus 74 --~adiIiiavps-------~~~~~~l~~i~~~l~~~~~ii~~ 107 (329)
T Consensus 150 ~~~yDvII~D~tDP~gpa~~Lft~~Fy~~~~~~L~~~Gi~v~Q 192 (283)
T PRK00811 150 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEGGIFVAQ 192 (283)
T ss_pred CCCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEC
T ss_conf 2355489980899886445534599999999853999589992