HHsearch alignment for GI: 254781039 and conserved domain: PRK05086

Probab=97.44  E-value=0.00082  Score=44.49  Aligned_cols=101  Identities=17%  Similarity=0.142  Sum_probs=59.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHCC--CCEEEEEECCHH-HHHHHHHCCCCCCCCCCCCCCCCEEEEE-CHHHHHHHHHHH
Q ss_conf             77999778-878999999999779--981899944989-9999997789842279881787438973-168775555441
Q gi|254781039|r    5 STIFVIGA-GAFGTALSSVIASRG--LANVTLLGRKEI-LMQQLEDTRINAKALPGIKLSPLLNFSS-DHTLLQNADIVL   79 (329)
Q Consensus         5 ~kI~ViGa-Ga~GtAlA~~La~~g--~~~V~l~~r~~~-~~~~i~~~~~n~~~lp~i~l~~~i~~t~-~~~~l~~adiIi   79 (329)
T Consensus         1 mKV~IiGA~G~VG~s~A~~l~~~~~~~~el~L~Di~~~~~G~alDL~h~~------~~~~~~~~~~~~~~~~l~~adiVv   74 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIP------TAVKIKGFSGEDPTPALEGADVVL   74 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCC------CCCCCCEEECCCHHHHHCCCCEEE
T ss_conf             98999989986999999999828987774999758888610565654787------546653461698678717999999


Q ss_pred             CCC--CH--------------HHHHHHHHHHHHHCCCCCCEEECCCCCC
Q ss_conf             122--17--------------7766655553320356850552375200
Q gi|254781039|r   80 FAT--SS--------------KGYGEALNFYSNWLKESAEIIICSKGFE  112 (329)
Q Consensus        80 iav--ps--------------~~~~~~l~~i~~~l~~~~~ii~~sKGi~  112 (329)
T Consensus        75 itAG~~rkpG~tR~dLl~~Na~I~~~i~~~I~~~~-p~aiiivvsNPvD  122 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVN  122 (312)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEECCCHH
T ss_conf             87898998589889999987899999999887208-9718999548327