HHsearch alignment for GI: 254781039 and conserved domain: PRK05472
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional.
Probab=96.55 E-value=0.0099 Score=37.47 Aligned_cols=82 Identities=16% Similarity=0.317 Sum_probs=55.5
Q ss_pred CCCCEEEEECCCHHHHHHHHH--HHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC-HHHHHH--HH
Q ss_conf 888779997788789999999--9977998189994498999999977898422798817874389731-687755--55
Q gi|254781039|r 2 KNYSTIFVIGAGAFGTALSSV--IASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSD-HTLLQN--AD 76 (329)
Q Consensus 2 ~~~~kI~ViGaGa~GtAlA~~--La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~-~~~l~~--ad 76 (329)
T Consensus 82 ~~~~~v~lvGaGnLG~AL~~y~gf~~~gf~Iva~FD~dp~ki------G~~---i~gi~----V~~i~~L~~~i~~~~i~ 148 (211)
T PRK05472 82 DKTTNVALVGAGNLGRALLNYNGFKKRGFKIVAAFDVDPEKV------GTK---IGGIP----VYHIDELEEVIKENDIE 148 (211)
T ss_pred CCCCEEEEECCCHHHHHHHHCCCHHHCCCEEEEEECCCHHHC------CCE---ECCEE----EECHHHHHHHHHHHCCC
T ss_conf 997508998887799999848762318978999974897885------988---38838----73499999999981993
Q ss_pred HHHCCCCHHHHHHHHHHHHH
Q ss_conf 44112217776665555332
Q gi|254781039|r 77 IVLFATSSKGYGEALNFYSN 96 (329)
Q Consensus 77 iIiiavps~~~~~~l~~i~~ 96 (329)
T Consensus 149 iaIiaVP~~~AQ~vad~Lv~ 168 (211)
T PRK05472 149 IAILTVPAEAAQEVADRLVE 168 (211)
T ss_pred EEEEECCHHHHHHHHHHHHH
T ss_conf 89995576889999999998