HHsearch alignment for GI: 254781039 and conserved domain: PRK06046

Probab=96.92  E-value=0.003  Score=40.85  Aligned_cols=92  Identities=18%  Similarity=0.268  Sum_probs=60.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCC
Q ss_conf             88779997788789999999997-79981899944989999999778984227988178743897316877555544112
Q gi|254781039|r    3 NYSTIFVIGAGAFGTALSSVIAS-RGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFA   81 (329)
Q Consensus         3 ~~~kI~ViGaGa~GtAlA~~La~-~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiia   81 (329)
T Consensus       128 ~~~~l~iiG~G~Qa~~~~~al~~v~~i~~i~v~~r~~~~~~~fa~~~~--~-----~~~~~v~~~~~~~~~~~aDiI~ta  200 (326)
T PRK06046        128 DSKVIGIIGAGNQARTQLEALSRVFDLEEVRVYDRTKESCEKFISEMS--D-----FVPCEIVYEEDVEEACDCDILVTT  200 (326)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH--H-----HCCCCEEECCCHHHHHCCCEEEEE
T ss_conf             985589965708899999999973897789999189999999999998--6-----559865973999998279999998


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             217776665555332035685055
Q gi|254781039|r   82 TSSKGYGEALNFYSNWLKESAEII  105 (329)
Q Consensus        82 vps~~~~~~l~~i~~~l~~~~~ii  105 (329)
T Consensus       201 T~s~~--P~~~--~~~l~pG~hi~  220 (326)
T PRK06046        201 TPSRK--PVVK--ADWVKEGTHIN  220 (326)
T ss_pred             ECCCC--CEEC--CCCCCCCCEEE
T ss_conf             28998--4514--43357871774