HHsearch alignment for GI: 254781039 and conserved domain: PRK06407

Probab=96.92  E-value=0.0035  Score=40.43  Aligned_cols=110  Identities=15%  Similarity=0.112  Sum_probs=65.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC-HHHHHHHHHHHC
Q ss_conf             88779997788789999999997-7998189994498999999977898422798817874389731-687755554411
Q gi|254781039|r    3 NYSTIFVIGAGAFGTALSSVIAS-RGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSD-HTLLQNADIVLF   80 (329)
Q Consensus         3 ~~~kI~ViGaGa~GtAlA~~La~-~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~-~~~l~~adiIii   80 (329)
T Consensus       117 ~~~~l~iiG~G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~-~~--~~~----~~v~~~~~~e~av~~aDiI~t  189 (302)
T PRK06407        117 NVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERF-SK--EFG----VDIRPVDNAEAALRDADTITS  189 (302)
T ss_pred             CCCEEEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HH--HCC----CCEEEECCHHHHHHHCCEEEE
T ss_conf             98789999665999999999997407738999808889999999998-64--409----957994899999834999999


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHH
Q ss_conf             22177766655553320356850552375200025854310123
Q gi|254781039|r   81 ATSSKGYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSE  124 (329)
Q Consensus        81 avps~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~  124 (329)
T Consensus       190 aT~s~~--Pv~~--~~~l~~g~hi~a-iGa~~p~~~Eld~~ll~  228 (302)
T PRK06407        190 ITNSDT--PIFN--RKYLGDEYHVNL-AGSNYPNRREAEHSVLN  228 (302)
T ss_pred             ECCCCC--CCCC--HHHCCCCCEEEE-ECCCCCCCCCCCHHHHH
T ss_conf             418988--6715--888799948996-37999985307999996