HHsearch alignment for GI: 254781039 and conserved domain: PRK07878

Probab=96.47  E-value=0.0022  Score=41.67  Aligned_cols=106  Identities=19%  Similarity=0.246  Sum_probs=68.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCC-------C----------CCCCCCCC-CCEEEE
Q ss_conf             77999778878999999999779981899944989999999778984-------2----------27988178-743897
Q gi|254781039|r    5 STIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINA-------K----------ALPGIKLS-PLLNFS   66 (329)
Q Consensus         5 ~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~-------~----------~lp~i~l~-~~i~~t   66 (329)
T Consensus        43 a~VlvvG~GGLG~~~~~yLaaaGvG~i~ivD~D~v~~sNL~RQil~~~~dvG~~K~~~a~~~l~~~Np~v~v~~~~~~l~  122 (392)
T PRK07878         43 ARVLVIGAGGLGSPTLLYLAAAGVGTIGIVEFDVVDESNLQRQIIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLE  122 (392)
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHCCC
T ss_conf             97899878757899999999828975999878996745577200568433587079999999998789853121131378


Q ss_pred             --ECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCC-CCC
Q ss_conf             --3168775555441122177766655553320356850552375-200
Q gi|254781039|r   67 --SDHTLLQNADIVLFATSSKGYGEALNFYSNWLKESAEIIICSK-GFE  112 (329)
Q Consensus        67 --~~~~~l~~adiIiiavps~~~~~~l~~i~~~l~~~~~ii~~sK-Gi~  112 (329)
T Consensus       123 ~~n~~~li~~~DvViD~tDN~~tR~lindac~~--~~~PlV~ga~~~~~  169 (392)
T PRK07878        123 PSNAVDLFAQYDLILDGTDNFATRYLVNDAAVL--AGKPYVWGSIYRFE  169 (392)
T ss_pred             HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH--HCCCEEEEEECCCE
T ss_conf             889876431776898668998999999999999--69987997605758