HHsearch alignment for GI: 254781039 and conserved domain: PRK08300

Probab=94.28  E-value=0.037  Score=33.73  Aligned_cols=93  Identities=24%  Similarity=0.261  Sum_probs=57.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC-HHH------H
Q ss_conf             988877999778878999999999779981-89994498999999977898422798817874389731-687------7
Q gi|254781039|r    1 MKNYSTIFVIGAGAFGTALSSVIASRGLAN-VTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSD-HTL------L   72 (329)
Q Consensus         1 M~~~~kI~ViGaGa~GtAlA~~La~~g~~~-V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~-~~~------l   72 (329)
T Consensus         1 ~~~k~~vAIiGsGnIGtDLm~Ki~Rs~~le~~~~vG~dp~S-~GL~rA~~----l-Gv~------ts~~GId~ll~~~~~   68 (298)
T PRK08300          1 MMSKIKVAIIGSGNIGTDLMIKILRSPHLEPVAMVGIDPES-DGLARARR----L-GVA------TTAEGIDGLLAHPEF   68 (298)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCC-HHHHHHHH----C-CCC------CCCCCHHHHHHCCCC
T ss_conf             98753499988883389999998657761069998059898-49999998----4-996------637679999618335


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECC
Q ss_conf             555544112217776665555332035685055237
Q gi|254781039|r   73 QNADIVLFATSSKGYGEALNFYSNWLKESAEIIICS  108 (329)
Q Consensus        73 ~~adiIiiavps~~~~~~l~~i~~~l~~~~~ii~~s  108 (329)
T Consensus        69 ~~idiVFDATSA~aH~~h~~~l~~~---g~~~IDLT  101 (298)
T PRK08300         69 DDIDIVFDATSAGAHVENAAKLREL---GVRVIDLT  101 (298)
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHHC---CCEEEECC
T ss_conf             6878899789806689999999973---98799677