HHsearch alignment for GI: 254781039 and conserved domain: PRK08618

Probab=96.93  E-value=0.0038  Score=40.18  Aligned_cols=90  Identities=18%  Similarity=0.252  Sum_probs=59.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC-HHHHHHHHHHHCC
Q ss_conf             8779997788789999999997-7998189994498999999977898422798817874389731-6877555544112
Q gi|254781039|r    4 YSTIFVIGAGAFGTALSSVIAS-RGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSD-HTLLQNADIVLFA   81 (329)
Q Consensus         4 ~~kI~ViGaGa~GtAlA~~La~-~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~-~~~l~~adiIiia   81 (329)
T Consensus       127 a~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~~~~f~~~~~-~~------~g~~v~~~~~~~~av~~aDiV~ta  199 (325)
T PRK08618        127 AKTLCLIGTGGQAKGQLEAVLAVRDIEKVRVYSRTFEKAYAFAQEIQ-SK------FNTEIYVVESADEAIEEADIIVTV  199 (325)
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH-HH------CCCCEEEECCHHHHHHHCCEEEEE
T ss_conf             85699975607999999999860896689999479999999999998-75------099669958999998439889992


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             217776665555332035685055
Q gi|254781039|r   82 TSSKGYGEALNFYSNWLKESAEII  105 (329)
Q Consensus        82 vps~~~~~~l~~i~~~l~~~~~ii  105 (329)
T Consensus       200 T~s~~--Pv~~---~~l~~g~hi~  218 (325)
T PRK08618        200 TNAKT--PVFS---EKLKKGVHIN  218 (325)
T ss_pred             CCCCC--CCCC---CCCCCCEEEC
T ss_conf             59998--6445---4358871751