HHsearch alignment for GI: 254781039 and conserved domain: PRK11730
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=98.46 E-value=3.9e-07 Score=66.10 Aligned_cols=108 Identities=16% Similarity=0.158 Sum_probs=79.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH--------H----HCCCCCCCCCCCCCCCCEEEEECHH
Q ss_conf 887799977887899999999977998189994498999999--------9----7789842279881787438973168
Q gi|254781039|r 3 NYSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQL--------E----DTRINAKALPGIKLSPLLNFSSDHT 70 (329)
Q Consensus 3 ~~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i--------~----~~~~n~~~lp~i~l~~~i~~t~~~~ 70 (329)
T Consensus 312 ~i~~v~ViGaG~MG~GIA~~~a~aG-~~V~l~D~~~e~l~~g~~~~~~~~~~~v~~g~~~~~~--~~~~l~ri~~~~~~~ 388 (715)
T PRK11730 312 DVKQAAVLGAGIMGGGIAYQSASKG-VPVIMKDINQKALDLGMNEAAKLLNKQVERGRIDGLK--MAGVLSTITPTLDYA 388 (715)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHH--HHHHHHCCCCCCCCH
T ss_conf 7627999787710799999999579-9579997899999999999999999998648998799--999995687415402
Q ss_pred HHHHHHHHHCCCCHH--HHHHHHHHHHHHCCCCCCEEECCCCCCC
Q ss_conf 775555441122177--7666555533203568505523752000
Q gi|254781039|r 71 LLQNADIVLFATSSK--GYGEALNFYSNWLKESAEIIICSKGFEY 113 (329)
Q Consensus 71 ~l~~adiIiiavps~--~~~~~l~~i~~~l~~~~~ii~~sKGi~~ 113 (329)
T Consensus 389 ~l~~~DlVIEAV~E~l~~K~~vf~~l~~~~~~~aIlAsNTSsl~i 433 (715)
T PRK11730 389 GFKDVDVVVEAVVENPKVKAAVLAEVEQKVREDTILASNTSTISI 433 (715)
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCH
T ss_conf 433588899854365889999999998655875388515765778