HHsearch alignment for GI: 254781039 and conserved domain: PRK11863

Probab=94.98  E-value=0.056  Score=32.57  Aligned_cols=83  Identities=25%  Similarity=0.405  Sum_probs=55.7

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHH
Q ss_conf             988877999778-8789999999997799818999449899999997789842279881787438973168775555441
Q gi|254781039|r    1 MKNYSTIFVIGA-GAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVL   79 (329)
Q Consensus         1 M~~~~kI~ViGa-Ga~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIi   79 (329)
T Consensus         1 M~--~kV~I~GasGytG~EL~rlL~~H--p~vel~~i~~~~-------~k------~~--------~~~~~~~~~~DvvF   55 (314)
T PRK11863          1 MK--PKVFIDGEAGTTGLQIRERLAGR--SDIELLSIPEAK-------RK------DP--------AARRELLNAADIAI   55 (314)
T ss_pred             CC--CEEEEECCCCCHHHHHHHHHHCC--CCEEEEEECCCC-------CC------CH--------HHHHHHHHCCCEEE
T ss_conf             98--26999899885699999999759--982999967112-------55------75--------56787750699999


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf             12217776665555332035685055237520
Q gi|254781039|r   80 FATSSKGYGEALNFYSNWLKESAEIIICSKGF  111 (329)
Q Consensus        80 iavps~~~~~~l~~i~~~l~~~~~ii~~sKGi  111 (329)
T Consensus        56 lalPh~~s~~~v~~~~---~~g~kVIDLSaDf   84 (314)
T PRK11863         56 LCLPDDAAREAVALID---NPATRVIDASTAH   84 (314)
T ss_pred             ECCCCHHHHHHHHHHH---HCCCEEEECCCCC
T ss_conf             9999778999999886---2798899898544