HHsearch alignment for GI: 254781039 and conserved domain: PRK12480

Probab=97.28  E-value=0.0014  Score=42.97  Aligned_cols=89  Identities=21%  Similarity=0.262  Sum_probs=56.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCH
Q ss_conf             77999778878999999999779981899944989999999778984227988178743897316877555544112217
Q gi|254781039|r    5 STIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFATSS   84 (329)
Q Consensus         5 ~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiavps   84 (329)
T Consensus       147 ktvGIiG~G~IG~~va~~~~~fg-~~Vi~yD~~~~~------~-----------~~~~~~~~sleell~~sDiIslh~Pl  208 (330)
T PRK12480        147 MTVAIIGTGRIGAATAKIYAGFG-ATITAYDAYPNK------D-----------LDFLTYKDSVKEAIKDADIISLHVPA  208 (330)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCC-CEEEEECCCCCC------C-----------CCCCEECCCHHHHHHHCCEEEECCCC
T ss_conf             68999675889999999987569-989998998642------2-----------12132327899998759999973768


Q ss_pred             HH-HHHHH-HHHHHHCCCCCCEEECCCCC
Q ss_conf             77-66655-55332035685055237520
Q gi|254781039|r   85 KG-YGEAL-NFYSNWLKESAEIIICSKGF  111 (329)
Q Consensus        85 ~~-~~~~l-~~i~~~l~~~~~ii~~sKGi  111 (329)
T Consensus       209 t~~T~~lIn~~~l~~MK~~ailINtaRG~  237 (330)
T PRK12480        209 NKESYHLFDKAMFDHVKKGAILVNAARGA  237 (330)
T ss_pred             CHHHHCCHHHHHHHHCCCCCEEEECCCCC
T ss_conf             53312004899997579997699727863