HHsearch alignment for GI: 254781039 and conserved domain: PRK12778
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional.
Probab=96.60 E-value=0.0092 Score=37.67 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=66.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHH---------------------HHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 8877999778878999999999779981899944989---------------------9999997789842279881787
Q gi|254781039|r 3 NYSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEI---------------------LMQQLEDTRINAKALPGIKLSP 61 (329)
Q Consensus 3 ~~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~---------------------~~~~i~~~~~n~~~lp~i~l~~ 61 (329)
T Consensus 438 ~GkKVAVIGsGPAGLsaA~~La~~G-~~VtVFE~~~~~GG~L~yGIP~fRLPk~iv~~eI~~l~~l--------GV~~~~ 508 (760)
T PRK12778 438 NGIKVAVIGSGPAGLSFAGDMAKYG-YDVTVFEALHEIGGVLKYGIPEFRLPNKIVDVEIENLVKM--------GVTFEK 508 (760)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHC--------CCEEEC
T ss_conf 8998999897789999999999779-9069980588889757654861108789999999999864--------979989
Q ss_pred CEEEEEC--HHHHH--HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHH------HH-H---HH
Q ss_conf 4389731--68775--5554411221777666555533203568505523752000258543101------23-3---21
Q gi|254781039|r 62 LLNFSSD--HTLLQ--NADIVLFATSSKGYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSY------SE-K---VL 127 (329)
Q Consensus 62 ~i~~t~~--~~~l~--~adiIiiavps~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~------i~-~---~~ 127 (329)
T Consensus 509 n~~vGkdit~~eL~~egyDAVfla~Ga~~pr~-l----~-I-pGe~----l~gV~-~a~eFL~~vnl~~~~~~~~~~p~~ 576 (760)
T PRK12778 509 DCIVGKTISVEELEEEGFKGIFVASGAGLPNF-M----N-I-PGEN----SINIM-SSNEYLTRVNLMDAASPDSDTPVA 576 (760)
T ss_pred CCEECCCCCHHHHHHCCCCEEEEECCCCCCCC-C----C-C-CCCC----CCCCE-EHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 95778868999997588999999406787752-8----9-9-9866----77858-779999997644302666787422
Q ss_pred HHCCCEECCCCCHHHHHHHH
Q ss_conf 00121001288817899876
Q gi|254781039|r 128 PSHSISVLSGPGFARDIAQG 147 (329)
Q Consensus 128 ~~~~~~vlsGPs~A~Eia~~ 147 (329)
T Consensus 577 ~Gk~VvVIGGGntAmD~art 596 (760)
T PRK12778 577 FGKNVAVIGGGNTAMDSVRT 596 (760)
T ss_pred CCCEEEEECCCHHHHHHHHH
T ss_conf 69889999997609999999