HHsearch alignment for GI: 254781039 and conserved domain: PRK13303

Probab=97.16  E-value=0.0016  Score=42.66  Aligned_cols=90  Identities=17%  Similarity=0.158  Sum_probs=55.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEE---EECCHHHHHHHHHCCCCCCCCCCCCCCCCEE-EEECHHHHHHHHHHH
Q ss_conf             877999778878999999999779981899---9449899999997789842279881787438-973168775555441
Q gi|254781039|r    4 YSTIFVIGAGAFGTALSSVIASRGLANVTL---LGRKEILMQQLEDTRINAKALPGIKLSPLLN-FSSDHTLLQNADIVL   79 (329)
Q Consensus         4 ~~kI~ViGaGa~GtAlA~~La~~g~~~V~l---~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~-~t~~~~~l~~adiIi   79 (329)
T Consensus         1 MmrVgiiG~GaIG~~va~~l~~~~~~~~~~v~~~~~~~~~~~~~~~--------------~~~~~~~~~~~L~~~~DlVV   66 (265)
T PRK13303          1 MMKVAMIGFGAIAAAVYELLEHDPRLRVDWVIVPEHSVDAVRRALG--------------RAVQVVSSVDALAQRPDLVV   66 (265)
T ss_pred             CCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHC--------------CCCCCCCCHHHHHHCCCEEE
T ss_conf             9299998546899999999844997279999946852677875304--------------58864479889823799999


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf             1221777666555533203568505523752
Q gi|254781039|r   80 FATSSKGYGEALNFYSNWLKESAEIIICSKG  110 (329)
Q Consensus        80 iavps~~~~~~l~~i~~~l~~~~~ii~~sKG  110 (329)
T Consensus        67 E~A~~~av~~~~~~~L~---~g~dl~v~Svg   94 (265)
T PRK13303         67 ECAGHAALKEHVVPILK---AGIDCAVASVG   94 (265)
T ss_pred             ECCCHHHHHHHHHHHHH---CCCCEEEECCH
T ss_conf             89888999999999997---29988998815