HHsearch alignment for GI: 254781039 and conserved domain: PRK13403
>PRK13403 ketol-acid reductoisomerase; Provisional.
Probab=98.10 E-value=4.5e-05 Score=52.70 Aligned_cols=278 Identities=16% Similarity=0.219 Sum_probs=157.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCC
Q ss_conf 87799977887899999999977998189994498999999977898422798817874389731687755554411221
Q gi|254781039|r 4 YSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFATS 83 (329)
Q Consensus 4 ~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiavp 83 (329)
T Consensus 16 ~k~iaVIGYGsQG~AhAlNLrDSG~-~V~vglr~g~s~~~A~~~--------------Gf~v~~~~eA~~~aDvi~~L~p 80 (335)
T PRK13403 16 GKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKAD--------------GFEVMSVSEAVRTAQVVQMLLP 80 (335)
T ss_pred CCEEEEEEECCHHHHHHHHHHHCCC-CEEEEECCCCCHHHHHHC--------------CCEECCHHHHHHHCCEEEEECC
T ss_conf 9979997567076898856476399-779997998569999987--------------9931679999985797875088
Q ss_pred HHHHHHHHH-HHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEE----CCCCCHH--HHHH--HHHHHHCCC
Q ss_conf 777666555-533203568505523752000258543101233210012100----1288817--8998--765321246
Q gi|254781039|r 84 SKGYGEALN-FYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVLPSHSISV----LSGPGFA--RDIA--QGLPVGVIL 154 (329)
Q Consensus 84 s~~~~~~l~-~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~~~~~v----lsGPs~A--~Eia--~~~pt~~~i 154 (329)
T Consensus 81 D~~q~~vy~~~i~p~lk~G~-~L~FaHGfnI~--------~~~I~pp~~vdV~mvAPKgpG~~VR~~y~~G~Gvp~l~AV 151 (335)
T PRK13403 81 DEQQAHVYKAEVEENLREGQ-MLLFSHGFNIH--------FGQINPPSYVDVAMVAPKSPGHLVRRVFQEGNGVPALVAV 151 (335)
T ss_pred HHHHHHHHHHHHCCCCCCCC-EEEEECCCHHH--------CCEECCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEE
T ss_conf 58799999744255368997-23761443112--------2424578998679989999965799998717997459999
Q ss_pred C----CCHHHHHHHHHHHHCC-------CCEEEEECCCCCEEE--EEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 7----7317899999975341-------113899738861444--40002567788997521100380578999999899
Q gi|254781039|r 155 S----SKNIDISRRLSKILTT-------DSFRVYCSDDRIGVQ--IGGALKNVIAIASGILKGRGCGDSARAIVMVQGLS 221 (329)
Q Consensus 155 a----~~d~~~~~~i~~~~~~-------~~~~~~~s~D~~GvE--~~galKNv~AIa~Gi~~gl~~g~N~~aal~~~g~~ 221 (329)
T Consensus 152 ~qD~sg~a~~~alaya~aiG~~raGv~eTtF~eEtetDLfGEQ~VLcGg~~~l--i~agFetLveaGy~Pe~AYfE-~lh 228 (335)
T PRK13403 152 HQDATGTALHVALAYAKGVGCTRAGVIETTFQEETETDLFGEQAVLCGGVTAL--VKAGFETLTEGGYRPEIAYFE-CLH 228 (335)
T ss_pred EECCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCCHHHHHHH-HHH
T ss_conf 76897539999999998617776775622518888765122246540289999--999999999869987999999-998
Q ss_pred HHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHH-----HHCCCCCCHHCCCEECHHHHHHHHHHHHHHCCC
Q ss_conf 999999872254455320023210157764477530067877-----508907025729600319999999999998289
Q gi|254781039|r 222 EIMKLTEAMNGRADTILRLSGVGDLILTATSEQSRNFCFGIA-----LGRGEKQNPDQIQLVEGAIAVSCVINISKKMGL 296 (329)
Q Consensus 222 Em~~l~~~~g~~~~t~~glaG~GDl~~T~~s~~SRN~~~G~~-----lg~g~~~~~~~~~~vEG~~~~~~i~~l~~~~~~ 296 (329)
T Consensus 229 ElklIvdLi~e~--------G~~~M~~sISd----TAEYG~y~~g~rii~-~~~K~~Mk~vL~eIqsG~FAk~~~~en~~ 295 (335)
T PRK13403 229 ELKLIVDLMYEG--------GLTNMRHSISD----TAEFGDYVTGSRIVT-DETKKEMKRVLTEIQQGEFAKKWILENQA 295 (335)
T ss_pred HHHHHHHHHHHC--------CHHHHHHHCCC----HHHCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf 899999999955--------83667601285----876387135761048-88899999999876188206777875259
Q ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 87159999999807899899999984
Q gi|254781039|r 297 KLPIFQAISDVMMNHISVDEALSILL 322 (329)
Q Consensus 297 ~~Pi~~~v~~il~~~~~~~~~i~~L~ 322 (329)
T Consensus 296 G~p~l~~~r~~~~~H-~IE~VG~~LR 320 (335)
T PRK13403 296 GRPTYNAMKKAEQNH-QLEKVGAELR 320 (335)
T ss_pred CCHHHHHHHHHHHCC-CHHHHHHHHH
T ss_conf 978999999987569-7999999999