HHsearch alignment for GI: 254781039 and conserved domain: PRK13403

>PRK13403 ketol-acid reductoisomerase; Provisional.
Probab=98.10  E-value=4.5e-05  Score=52.70  Aligned_cols=278  Identities=16%  Similarity=0.219  Sum_probs=157.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCC
Q ss_conf             87799977887899999999977998189994498999999977898422798817874389731687755554411221
Q gi|254781039|r    4 YSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFATS   83 (329)
Q Consensus         4 ~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiavp   83 (329)
T Consensus        16 ~k~iaVIGYGsQG~AhAlNLrDSG~-~V~vglr~g~s~~~A~~~--------------Gf~v~~~~eA~~~aDvi~~L~p   80 (335)
T PRK13403         16 GKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKAD--------------GFEVMSVSEAVRTAQVVQMLLP   80 (335)
T ss_pred             CCEEEEEEECCHHHHHHHHHHHCCC-CEEEEECCCCCHHHHHHC--------------CCEECCHHHHHHHCCEEEEECC
T ss_conf             9979997567076898856476399-779997998569999987--------------9931679999985797875088


Q ss_pred             HHHHHHHHH-HHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEE----CCCCCHH--HHHH--HHHHHHCCC
Q ss_conf             777666555-533203568505523752000258543101233210012100----1288817--8998--765321246
Q gi|254781039|r   84 SKGYGEALN-FYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVLPSHSISV----LSGPGFA--RDIA--QGLPVGVIL  154 (329)
Q Consensus        84 s~~~~~~l~-~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~~~~~v----lsGPs~A--~Eia--~~~pt~~~i  154 (329)
T Consensus        81 D~~q~~vy~~~i~p~lk~G~-~L~FaHGfnI~--------~~~I~pp~~vdV~mvAPKgpG~~VR~~y~~G~Gvp~l~AV  151 (335)
T PRK13403         81 DEQQAHVYKAEVEENLREGQ-MLLFSHGFNIH--------FGQINPPSYVDVAMVAPKSPGHLVRRVFQEGNGVPALVAV  151 (335)
T ss_pred             HHHHHHHHHHHHCCCCCCCC-EEEEECCCHHH--------CCEECCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEE
T ss_conf             58799999744255368997-23761443112--------2424578998679989999965799998717997459999


Q ss_pred             C----CCHHHHHHHHHHHHCC-------CCEEEEECCCCCEEE--EEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             7----7317899999975341-------113899738861444--40002567788997521100380578999999899
Q gi|254781039|r  155 S----SKNIDISRRLSKILTT-------DSFRVYCSDDRIGVQ--IGGALKNVIAIASGILKGRGCGDSARAIVMVQGLS  221 (329)
Q Consensus       155 a----~~d~~~~~~i~~~~~~-------~~~~~~~s~D~~GvE--~~galKNv~AIa~Gi~~gl~~g~N~~aal~~~g~~  221 (329)
T Consensus       152 ~qD~sg~a~~~alaya~aiG~~raGv~eTtF~eEtetDLfGEQ~VLcGg~~~l--i~agFetLveaGy~Pe~AYfE-~lh  228 (335)
T PRK13403        152 HQDATGTALHVALAYAKGVGCTRAGVIETTFQEETETDLFGEQAVLCGGVTAL--VKAGFETLTEGGYRPEIAYFE-CLH  228 (335)
T ss_pred             EECCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCCHHHHHHH-HHH
T ss_conf             76897539999999998617776775622518888765122246540289999--999999999869987999999-998


Q ss_pred             HHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHH-----HHCCCCCCHHCCCEECHHHHHHHHHHHHHHCCC
Q ss_conf             999999872254455320023210157764477530067877-----508907025729600319999999999998289
Q gi|254781039|r  222 EIMKLTEAMNGRADTILRLSGVGDLILTATSEQSRNFCFGIA-----LGRGEKQNPDQIQLVEGAIAVSCVINISKKMGL  296 (329)
Q Consensus       222 Em~~l~~~~g~~~~t~~glaG~GDl~~T~~s~~SRN~~~G~~-----lg~g~~~~~~~~~~vEG~~~~~~i~~l~~~~~~  296 (329)
T Consensus       229 ElklIvdLi~e~--------G~~~M~~sISd----TAEYG~y~~g~rii~-~~~K~~Mk~vL~eIqsG~FAk~~~~en~~  295 (335)
T PRK13403        229 ELKLIVDLMYEG--------GLTNMRHSISD----TAEFGDYVTGSRIVT-DETKKEMKRVLTEIQQGEFAKKWILENQA  295 (335)
T ss_pred             HHHHHHHHHHHC--------CHHHHHHHCCC----HHHCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             899999999955--------83667601285----876387135761048-88899999999876188206777875259


Q ss_pred             CCCHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             87159999999807899899999984
Q gi|254781039|r  297 KLPIFQAISDVMMNHISVDEALSILL  322 (329)
Q Consensus       297 ~~Pi~~~v~~il~~~~~~~~~i~~L~  322 (329)
T Consensus       296 G~p~l~~~r~~~~~H-~IE~VG~~LR  320 (335)
T PRK13403        296 GRPTYNAMKKAEQNH-QLEKVGAELR  320 (335)
T ss_pred             CCHHHHHHHHHHHCC-CHHHHHHHHH
T ss_conf             978999999987569-7999999999