HHsearch alignment for GI: 254781039 and conserved domain: TIGR00872
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating); InterPro: IPR004849 This family resembles a larger family of bacterial and eukaryotic 6-phosphogluconate dehydrogenases (Gnd) but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain Gnd, and in Aquifex aeolicus. .
Probab=98.36 E-value=2e-06 Score=61.53 Aligned_cols=271 Identities=15% Similarity=0.167 Sum_probs=149.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HCCCCCCCCCCCCCCCCEEEEECHHH---HHHHHHHH
Q ss_conf 877999778878999999999779981899944989999999-77898422798817874389731687---75555441
Q gi|254781039|r 4 YSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLE-DTRINAKALPGIKLSPLLNFSSDHTL---LQNADIVL 79 (329)
Q Consensus 4 ~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~-~~~~n~~~lp~i~l~~~i~~t~~~~~---l~~adiIi 79 (329)
T Consensus 1 MktlglIGLGrMG~ni~~rl~~rg-h~~vgYd~~q~av~~~kG~d~~-------------~gv~nl~E~~~~l~~Pr~vW 66 (341)
T TIGR00872 1 MKTLGLIGLGRMGANIAKRLADRG-HEVVGYDRDQAAVEELKGEDRA-------------EGVANLKELLKRLSAPRVVW 66 (341)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEECCCHHHHHHHHCCCCC-------------CCCHHHHHHHHCCCCCCEEE
T ss_conf 952443133467899999985279-4699853887999997201134-------------30012478884179995899
Q ss_pred CCCCHH-HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHH--HCCCCC
Q ss_conf 122177-76665555332035685055237520002585431012332100121001288817899876532--124677
Q gi|254781039|r 80 FATSSK-GYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVLPSHSISVLSGPGFARDIAQGLPV--GVILSS 156 (329)
Q Consensus 80 iavps~-~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~~~~~vlsGPs~A~Eia~~~pt--~~~ia~ 156 (329)
T Consensus 67 vMVPhgnivdaVl~~l~p~L~kGD~vIdgGNsyYkds~Rry~~lke~gih~LD~G-tSGG~------~G~~~G~cfMiGG 139 (341)
T TIGR00872 67 VMVPHGNIVDAVLRELAPLLEKGDIVIDGGNSYYKDSLRRYKELKEKGIHYLDVG-TSGGV------LGKERGYCFMIGG 139 (341)
T ss_pred EECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEECC-CCCCC------CCCCCCCEEEECC
T ss_conf 8628736799999976667640888982786512334788876887187565345-45772------3044641477518
Q ss_pred CHHHHHHHHHHHHCC--CCEEEEECCCCCEEEEEEHHHH-HHHHH--HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 317899999975341--1138997388614444000256-77889--97521100380578999999899999999872-
Q gi|254781039|r 157 KNIDISRRLSKILTT--DSFRVYCSDDRIGVQIGGALKN-VIAIA--SGILKGRGCGDSARAIVMVQGLSEIMKLTEAM- 230 (329)
Q Consensus 157 ~d~~~~~~i~~~~~~--~~~~~~~s~D~~GvE~~galKN-v~AIa--~Gi~~gl~~g~N~~aal~~~g~~Em~~l~~~~- 230 (329)
T Consensus 140 -D~eaf~~~EplF~tvaPGvaaaPrt--PGrdGd~A~ee~GYly~G~~GsGHF~KMvHNGIEYG~MaaiaEGfe~L~nsd 216 (341)
T TIGR00872 140 -DEEAFKKAEPLFKTVAPGVAAAPRT--PGRDGDVAVEEKGYLYLGEAGSGHFVKMVHNGIEYGMMAAIAEGFEVLKNSD 216 (341)
T ss_pred -CHHHHHHHCHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf -4799976221443206652137888--7887760625676155458787663022224513888999987789875246
Q ss_pred -C-----CCHHHH-----------HHCCCCCEEEEEEECCCC--CHHHHHHH---HHCCCCCCHHCCC---EECHHHHHH
Q ss_conf -2-----544553-----------200232101577644775--30067877---5089070257296---003199999
Q gi|254781039|r 231 -N-----GRADTI-----------LRLSGVGDLILTATSEQS--RNFCFGIA---LGRGEKQNPDQIQ---LVEGAIAVS 285 (329)
Q Consensus 231 -g-----~~~~t~-----------~glaG~GDl~~T~~s~~S--RN~~~G~~---lg~g~~~~~~~~~---~vEG~~~~~ 285 (329)
T Consensus 217 vGtrvqhGdaetaPlPnPeCyqfDfD~~eVAr----Vw~~GSVIrSwL~dLt~~Af~~~~dL~~~~G~v~dSGEGrWtv~ 292 (341)
T TIGR00872 217 VGTRVQHGDAETAPLPNPECYQFDFDLEEVAR----VWRRGSVIRSWLLDLTAKAFEESADLEEVEGIVEDSGEGRWTVK 292 (341)
T ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCHHHHHH----HHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH
T ss_conf 55500037544678877877777687488999----87089864126888999997507882132236702787278999
Q ss_pred HHHHHHHHCCCCCCHHHHHHH
Q ss_conf 999999982898715999999
Q gi|254781039|r 286 CVINISKKMGLKLPIFQAISD 306 (329)
Q Consensus 286 ~i~~l~~~~~~~~Pi~~~v~~ 306 (329)
T Consensus 293 ~a~dl----g~p~PVia~sl~ 309 (341)
T TIGR00872 293 EAVDL----GVPIPVIATSLY 309 (341)
T ss_pred HHHHC----CCCHHHHHHHHH
T ss_conf 98862----788248999999