HHsearch alignment for GI: 254781039 and conserved domain: TIGR01316

>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=95.54  E-value=0.023  Score=35.07  Aligned_cols=173  Identities=20%  Similarity=0.241  Sum_probs=83.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEE------------C-----CHHHHH-HHHHCCCCCCCCCCCCCCCCEE
Q ss_conf             887799977887899999999977998189994------------4-----989999-9997789842279881787438
Q gi|254781039|r    3 NYSTIFVIGAGAFGTALSSVIASRGLANVTLLG------------R-----KEILMQ-QLEDTRINAKALPGIKLSPLLN   64 (329)
Q Consensus         3 ~~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~------------r-----~~~~~~-~i~~~~~n~~~lp~i~l~~~i~   64 (329)
T Consensus       141 t~~kVAViGaGPAGL~cA~elAk~G-h~VtvfEALhKPGGV~~YGIPefRLpKei~~~E~k~Lk----kl-Gv~fr~~~l  214 (462)
T TIGR01316       141 TKKKVAVIGAGPAGLACASELAKKG-HEVTVFEALHKPGGVLAYGIPEFRLPKEIVETEVKKLK----KL-GVKFRTDYL  214 (462)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHCC-CEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHH----HC-CEEEEECCE
T ss_conf             8877999846821468899997479-86999971489985675368885487578898888763----26-637994437


Q ss_pred             E---EECHHHHHHH--HHHHCCCCHHHHHHHHH----HHHHHCCCCCC--EEECCCCCCCCCCCCCCHHHHHHHHHCCCE
Q ss_conf             9---7316877555--54411221777666555----53320356850--552375200025854310123321001210
Q gi|254781039|r   65 F---SSDHTLLQNA--DIVLFATSSKGYGEALN----FYSNWLKESAE--IIICSKGFEYNSGMLLSSYSEKVLPSHSIS  133 (329)
Q Consensus        65 ~---t~~~~~l~~a--diIiiavps~~~~~~l~----~i~~~l~~~~~--ii~~sKGi~~~t~~~~se~i~~~~~~~~~~  133 (329)
T Consensus       215 vGkt~TL~eL~~~YGfDAVFIgtGAG-~pkl~NipG~~L~gvysA~dfLtR~nLmKAyefp~~dtPv~~------gK~vv  287 (462)
T TIGR01316       215 VGKTVTLEELLEKYGFDAVFIGTGAG-LPKLLNIPGEELKGVYSANDFLTRVNLMKAYEFPKKDTPVEV------GKKVV  287 (462)
T ss_pred             ECCCHHHHHHHHHCCCCEEEEEECCC-CCEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE------CCEEE
T ss_conf             50511288888751970799950689-870016784343400223468877777654236678875654------47689


Q ss_pred             ECCCCCHHHHHHHH---HHHH-CCCC---CCHH--HHHHHHHHHHCC-CCE-EEEECCCCCEEEEE
Q ss_conf             01288817899876---5321-2467---7317--899999975341-113-89973886144440
Q gi|254781039|r  134 VLSGPGFARDIAQG---LPVG-VILS---SKNI--DISRRLSKILTT-DSF-RVYCSDDRIGVQIG  188 (329)
Q Consensus       134 vlsGPs~A~Eia~~---~pt~-~~ia---~~d~--~~~~~i~~~~~~-~~~-~~~~s~D~~GvE~~  188 (329)
T Consensus       288 viGgGntAvD~artAlRLGaEqvh~~YRrtRedmtAr~EEi~ha~eEGVkfhfl~Qpve~iGdE~G  353 (462)
T TIGR01316       288 VIGGGNTAVDAARTALRLGAEQVHVVYRRTREDMTAREEEIKHAEEEGVKFHFLLQPVEVIGDEEG  353 (462)
T ss_pred             EECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCEEEEECCCC
T ss_conf             987853678777666452842369988547775136699999885389289987421689865765