HHsearch alignment for GI: 254781039 and conserved domain: TIGR01415
>TIGR01415 trpB_rel pyridoxal-phosphate dependent TrpB-like enzyme; InterPro: IPR006316 These sequences represent a family of pyridoxal-phosphate dependent enzymes that are closely related to the beta subunit of tryptophan synthase. ; GO: 0004834 tryptophan synthase activity, 0030170 pyridoxal phosphate binding, 0000162 tryptophan biosynthetic process.
Probab=92.02 E-value=0.17 Score=29.50 Aligned_cols=147 Identities=17% Similarity=0.110 Sum_probs=67.0
Q ss_pred ECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC-HHHHHH--HH---HHHCCCC
Q ss_conf 77887899999999977998189994498999999977898422798817874389731-687755--55---4411221
Q gi|254781039|r 10 IGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSD-HTLLQN--AD---IVLFATS 83 (329)
Q Consensus 10 iGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~-~~~l~~--ad---iIiiavp 83 (329)
T Consensus 127 TGAGQWG~AlS~A~al~~-L~~~VfMvr~Sf~~KP~Rk~l-M~~yGa~V~PSPS~~T~~GR~~L~e~gP~~PGSLGiAI- 203 (426)
T TIGR01415 127 TGAGQWGSALSLAGALFG-LKVKVFMVRVSFQQKPYRKYL-MELYGAEVIPSPSELTEFGRKVLKEDGPDHPGSLGIAI- 203 (426)
T ss_pred CCCCHHHHHHHHHHHHHC-CEEEEEEEECCHHCCHHHHHH-HHHCCCEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHH-
T ss_conf 688647899999998728-925898874121048468999-98708843368877513468887406777786167899-
Q ss_pred HHHHHHHHHHH-HHHCC----CCCCEEECCCCCCCCCCC-----CCCHHHHHHHHHCCCEECCCCCHHHHHHHHH--HHH
Q ss_conf 77766655553-32035----685055237520002585-----4310123321001210012888178998765--321
Q gi|254781039|r 84 SKGYGEALNFY-SNWLK----ESAEIIICSKGFEYNSGM-----LLSSYSEKVLPSHSISVLSGPGFARDIAQGL--PVG 151 (329)
Q Consensus 84 s~~~~~~l~~i-~~~l~----~~~~ii~~sKGi~~~t~~-----~~se~i~~~~~~~~~~vlsGPs~A~Eia~~~--pt~ 151 (329)
T Consensus 204 SEA~e~al~~~~~~Y~lGSVLnhvLlHqTViGLEaKkQlE~~Ge~PD~~~GcVGGGSNFaG~~fPf~~D~Ls~G~~~~~~ 283 (426)
T TIGR01415 204 SEAIEEALSDEDTKYSLGSVLNHVLLHQTVIGLEAKKQLEEAGEKPDVIIGCVGGGSNFAGLAFPFVADKLSSGKKFEDL 283 (426)
T ss_pred HHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCHHHHHHCCCCCEEEE
T ss_conf 99999997089944446305666788766787645553241079998899973385447877501122341478731334
Q ss_pred CCCCCCHH
Q ss_conf 24677317
Q gi|254781039|r 152 VILSSKNI 159 (329)
Q Consensus 152 ~~ia~~d~ 159 (329)
T Consensus 284 ~fiA~Ep~ 291 (426)
T TIGR01415 284 RFIAAEPK 291 (426)
T ss_pred EEEEECCC
T ss_conf 78874730