HHsearch alignment for GI: 254781039 and conserved domain: TIGR01692

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase; InterPro: IPR011548 3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes the NAD+-dependent oxidation of 3-hydroxyisobutyrate to methylmalonate semialdehyde of the valine catabolism pathway. In Pseudomonas aeruginosa, 3-hydroxyisobutyrate dehydrogenase (mmsB) is co-induced with methylmalonate-semialdehyde dehydrogenase (mmsA) when grown on medium containing valine as the sole carbon source. The positive transcriptional regulator of this operon (mmsR) is located upstream of these genes and has been identified as a member of the XylS/AraC family of transcriptional regulators . 3-hydroxyisobutyrate dehydrogenase shares high sequence homology to the characterised 3-hydroxyisobutyrate dehydrogenase from rat liver with conservation of proposed NAD+ binding residues at the N-terminus (G-8,10,13,24 and D-31). This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate . HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase. ; GO: 0008442 3-hydroxyisobutyrate dehydrogenase activity, 0051287 NAD binding.
Probab=97.89  E-value=0.00012  Score=49.82  Aligned_cols=191  Identities=16%  Similarity=0.168  Sum_probs=140.5

Q ss_pred             EECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCHH-HH
Q ss_conf             97788789999999997799818999449899999997789842279881787438973168775555441122177-76
Q gi|254781039|r    9 VIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFATSSK-GY   87 (329)
Q Consensus         9 ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiavps~-~~   87 (329)
T Consensus         1 FIGLGNMGgPMA~NL~KAG-H~v~~FDL~p~av~~~v~aG~~-------------~A~S~~~a~~~Ad~vITMLPAg~HV   66 (290)
T TIGR01692         1 FIGLGNMGGPMAANLLKAG-HAVRVFDLSPKAVEELVEAGAQ-------------AAASAAEAAEGADVVITMLPAGKHV   66 (290)
T ss_pred             CCCCCCCCHHHHHHHHHHC-CEEEEEECCHHHHHHHHHCCHH-------------CCCCHHHHHCCCCEEEECCCCCHHH
T ss_conf             9788888227999986118-7257751788999999960022-------------0545798845588686348860348


Q ss_pred             HHHH---HHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHH---HHCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             6655---553320356850552375200025854310123321---0012100128881789987653212467731789
Q gi|254781039|r   88 GEAL---NFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVL---PSHSISVLSGPGFARDIAQGLPVGVILSSKNIDI  161 (329)
Q Consensus        88 ~~~l---~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~---~~~~~~vlsGPs~A~Eia~~~pt~~~ia~~d~~~  161 (329)
T Consensus        67 ~sVY~gd~gIL~~~~K~~LlIDcS-TIDpdsAr~~A~~Aa~~G~~f~DAPV---SGG~GgA~--AGTLtFmV--GG~a~~  138 (290)
T TIGR01692        67 ISVYSGDDGILAKVAKGSLLIDCS-TIDPDSARKVAELAAAHGLVFVDAPV---SGGVGGAR--AGTLTFMV--GGEAEE  138 (290)
T ss_pred             HHHHHCCHHHHCCCCCCCCEEECC-CCCHHHHHHHHHHHHHCCCCEECCCC---CCCHHHHH--HCCCEEEE--CCCHHH
T ss_conf             999833133411367889633245-67867899999999981872103677---75356520--12230564--376535


Q ss_pred             HHHHHHHHCCCC-EEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             999997534111-389973886144440002567788997521100380578999999899999999872254455320
Q gi|254781039|r  162 SRRLSKILTTDS-FRVYCSDDRIGVQIGGALKNVIAIASGILKGRGCGDSARAIVMVQGLSEIMKLTEAMNGRADTILR  239 (329)
Q Consensus       162 ~~~i~~~~~~~~-~~~~~s~D~~GvE~~galKNv~AIa~Gi~~gl~~g~N~~aal~~~g~~Em~~l~~~~g~~~~t~~g  239 (329)
T Consensus       139 F~~~~p~L~~Mg~~~~HcG~~GAG-Q-----------------~AKICNNmlLGIsM~GtaEA~~Lg~klGLdp~~L~~  199 (290)
T TIGR01692       139 FARARPVLEPMGRNIVHCGDHGAG-Q-----------------AAKICNNMLLGISMIGTAEAMALGEKLGLDPKVLFE  199 (290)
T ss_pred             HHHHHHHHHCCCCCEEEECCCCCC-C-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             788999985366656866888875-1-----------------578998899999899999999999861788889999