HHsearch alignment for GI: 254781039 and conserved domain: TIGR01724
>TIGR01724 hmd_rel coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase-related protein; InterPro: IPR010063 This entry identifies a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase, (IPR010062 from INTERPRO). All members are restricted to archaeal methanogens and their function is unknown..
Probab=90.26 E-value=1 Score=24.42 Aligned_cols=188 Identities=18% Similarity=0.157 Sum_probs=110.7
Q ss_pred EEEEECCCH--------------------HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEE
Q ss_conf 799977887--------------------899999999977998189994498999999977898422798817874389
Q gi|254781039|r 6 TIFVIGAGA--------------------FGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNF 65 (329)
Q Consensus 6 kI~ViGaGa--------------------~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~ 65 (329)
T Consensus 2 k~~~yGaGnq~ly~~~l~~Pe~~GGe~PyGG~~ma~efa~aG-hdv~l~eP~~~~~~d~~W~~--------ve-~aGv~v 71 (341)
T TIGR01724 2 KVSVYGAGNQKLYLEKLNLPEKFGGEPPYGGSRMAIEFAKAG-HDVVLAEPNREVLSDDLWKK--------VE-DAGVKV 71 (341)
T ss_pred EEEEEECCCHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHCC-CCEEEECCCHHHHHHHHHHH--------HH-HCCCEE
T ss_conf 578871662256565413742227999986048899887428-70686077612311467777--------87-516645
Q ss_pred -EECHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHH----------HHCCCE
Q ss_conf -731687755554411221777-66655553320356850552375200025854310123321----------001210
Q gi|254781039|r 66 -SSDHTLLQNADIVLFATSSKG-YGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVL----------PSHSIS 133 (329)
Q Consensus 66 -t~~~~~l~~adiIiiavps~~-~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~----------~~~~~~ 133 (329)
T Consensus 72 ~~~d~eaa~~~e~~vlftPfG~~t~~ia~~i~~~~Pe~~~i~ntCt-~~~~--v-ly~~le~~l~~~r~dvG~ssmhP~~ 147 (341)
T TIGR01724 72 VSDDVEAAKHGEIHVLFTPFGKATLSIAKTIIEHVPENAVICNTCT-VSPV--V-LYYSLEKILRLKRKDVGISSMHPAA 147 (341)
T ss_pred EEHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCC-CCHH--H-HHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 3013543301755788635317899999999974686536620243-3336--8-8888788874322103200135667
Q ss_pred ECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEE--EEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCC
Q ss_conf 012888178998765321246773178999999753411138--9973886144440002567788997521100380
Q gi|254781039|r 134 VLSGPGFARDIAQGLPVGVILSSKNIDISRRLSKILTTDSFR--VYCSDDRIGVQIGGALKNVIAIASGILKGRGCGD 209 (329)
Q Consensus 134 vlsGPs~A~Eia~~~pt~~~ia~~d~~~~~~i~~~~~~~~~~--~~~s~D~~GvE~~galKNv~AIa~Gi~~gl~~g~ 209 (329)
T Consensus 148 vPGtP~~~~y~i~G~~~~~~~~at~~-q~~~~~el~~s~Gk~~y~~Padv~~~vadmG~lvtaval-~Gvldyy~vG~ 223 (341)
T TIGR01724 148 VPGTPQHGHYVIGGKATEGKELATEE-QIKKLVELAKSVGKKAYVVPADVSSAVADMGSLVTAVAL-AGVLDYYRVGT 223 (341)
T ss_pred CCCCCCCCEEEEECCCCCHHHHHHHH-HHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf 88988765267505420012212589-999999999841874301032036788655689999999-98888889889