HHsearch alignment for GI: 254781039 and conserved domain: cd05292
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.01 E-value=2.6e-05 Score=54.28 Aligned_cols=101 Identities=15% Similarity=0.299 Sum_probs=65.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CEEEEEECCHHHHHH--HHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCC
Q ss_conf 779997788789999999997799-818999449899999--99778984227988178743897316877555544112
Q gi|254781039|r 5 STIFVIGAGAFGTALSSVIASRGL-ANVTLLGRKEILMQQ--LEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFA 81 (329)
Q Consensus 5 ~kI~ViGaGa~GtAlA~~La~~g~-~~V~l~~r~~~~~~~--i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiia 81 (329)
T Consensus 1 mKI~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~DL~~a~~-~~-----~~~~i~~~~~~~l~daDvVVit 74 (308)
T cd05292 1 MKVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTP-FV-----KPVRIYAGDYADCKGADVVVIT 74 (308)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCC-CC-----CCCEEEECCHHHHCCCCEEEEC
T ss_conf 97999994888999999998679988799991889845125687662410-36-----8816840999997799999989
Q ss_pred C--CH--------------HHHHHHHHHHHHHCCCCCCEEECCCCCC
Q ss_conf 2--17--------------7766655553320356850552375200
Q gi|254781039|r 82 T--SS--------------KGYGEALNFYSNWLKESAEIIICSKGFE 112 (329)
Q Consensus 82 v--ps--------------~~~~~~l~~i~~~l~~~~~ii~~sKGi~ 112 (329)
T Consensus 75 aG~~rk~g~tR~dll~~Na~I~~~i~~~i~~~~-p~~ivivvsNPvD 120 (308)
T cd05292 75 AGANQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTNPVD 120 (308)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEECCCCHH
T ss_conf 999999899878999888999999999998419-9808997279547