HHsearch alignment for GI: 254781039 and conserved domain: cd05294

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.92  E-value=2.9e-05  Score=53.90  Aligned_cols=103  Identities=19%  Similarity=0.325  Sum_probs=67.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHCC-CCEEEEEECCHHH--HHH--HHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHH
Q ss_conf             77999778-878999999999779-9818999449899--999--99778984227988178743897316877555544
Q gi|254781039|r    5 STIFVIGA-GAFGTALSSVIASRG-LANVTLLGRKEIL--MQQ--LEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIV   78 (329)
Q Consensus         5 ~kI~ViGa-Ga~GtAlA~~La~~g-~~~V~l~~r~~~~--~~~--i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiI   78 (329)
T Consensus         1 mKV~IiGAaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~a~g~a~Dl~~~~~----~~~~~~~i~~~~d~~~~~daDiv   76 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALA----AAGIDAEIKISSDLSDVAGSDIV   76 (309)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHCCCC----CCCCCCEEEECCCHHHHCCCCEE
T ss_conf             98999999976999999999837998759996055643423112355450343----36887679827988996899999


Q ss_pred             HCCCCH----------------HHHHHHHHHHHHHCCCCCCEEECCCCCC
Q ss_conf             112217----------------7766655553320356850552375200
Q gi|254781039|r   79 LFATSS----------------KGYGEALNFYSNWLKESAEIIICSKGFE  112 (329)
Q Consensus        79 iiavps----------------~~~~~~l~~i~~~l~~~~~ii~~sKGi~  112 (329)
T Consensus        77 VitAG~~rk~g~tR~dLl~~Na~I~~~i~~~i~~~~-p~~ivivvtNPvD  125 (309)
T cd05294          77 IITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPVD  125 (309)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEECCCCHH
T ss_conf             987898899599878999989999999998764269-9849997689657