HHsearch alignment for GI: 254781039 and conserved domain: pfam03447

>pfam03447 NAD_binding_3 Homoserine dehydrogenase, NAD binding domain. This domain adopts a Rossmann NAD binding fold. The C-terminal domain of homoserine dehydrogenase contributes a single helix to this structural domain, which is not included in the Pfam model.
Probab=93.45  E-value=0.17  Score=29.46  Aligned_cols=87  Identities=24%  Similarity=0.279  Sum_probs=55.6

Q ss_pred             CCCHHHHHHHHHHHHCCCC-E---EEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECH-HHHH--HHHHHHCCCC
Q ss_conf             7887899999999977998-1---899944989999999778984227988178743897316-8775--5554411221
Q gi|254781039|r   11 GAGAFGTALSSVIASRGLA-N---VTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDH-TLLQ--NADIVLFATS   83 (329)
Q Consensus        11 GaGa~GtAlA~~La~~g~~-~---V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~-~~l~--~adiIiiavp   83 (329)
T Consensus         1 G~G~VG~~v~~~l~~~~~~~~~~l~~v~~r~~~~~~-----~--~~-----~-~~~~~~~~d~~~ll~~~~iDvVVE~~g   67 (116)
T pfam03447         1 GCGAIGSGLLELLLRQQEEIPLELVAVADRDLLSKA-----R--AA-----L-LGDEPVTLDLDDLVADPRPDVVVECAS   67 (116)
T ss_pred             CCCCHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCC-----C--CC-----C-CCCCEEECCHHHHHCCCCCCEEEECCC
T ss_conf             987028999999994920356799999847834323-----2--12-----4-666715779999961889989998899


Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEECCCCCCC
Q ss_conf             777666555533203568505523752000
Q gi|254781039|r   84 SKGYGEALNFYSNWLKESAEIIICSKGFEY  113 (329)
Q Consensus        84 s~~~~~~l~~i~~~l~~~~~ii~~sKGi~~  113 (329)
T Consensus        68 ~~~~~~---~~~~aL~~GkhVVTaNK~~lA   94 (116)
T pfam03447        68 SEAVAE---YVLKALKAGKHVVTASKGALA   94 (116)
T ss_pred             CHHHHH---HHHHHHHCCCEEEEECHHHHC
T ss_conf             489999---999999879989990788967