HHsearch alignment for GI: 254781039 and conserved domain: pfam08546
>pfam08546 ApbA_C Ketopantoate reductase PanE/ApbA C terminal. This is a family of 2-dehydropantoate 2-reductases also known as ketopantoate reductases, EC:1.1.1.169. The reaction catalysed by this enzyme is: (R)-pantoate + NADP(+) <= 2-dehydropantoate + NADPH. AbpA catalyses the NADPH reduction of ketopantoic acid to pantoic acid in the alternative pyrimidine biosynthetic (APB) pathway. ApbA and PanE are allelic. ApbA, the ketopantoate reductase enzyme is required for the synthesis of thiamine via the APB biosynthetic pathway.
Probab=91.61 E-value=0.98 Score=24.49 Aligned_cols=91 Identities=10% Similarity=0.091 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHCCCEECHHHHHHHHH
Q ss_conf 05789999998999999998722544553200232101577644775300678775089070257296003199999999
Q gi|254781039|r 209 DSARAIVMVQGLSEIMKLTEAMNGRADTILRLSGVGDLILTATSEQSRNFCFGIALGRGEKQNPDQIQLVEGAIAVSCVI 288 (329)
Q Consensus 209 ~N~~aal~~~g~~Em~~l~~~~g~~~~t~~glaG~GDl~~T~~s~~SRN~~~G~~lg~g~~~~~~~~~~vEG~~~~~~i~ 288 (329)
T Consensus 33 ~~~~~~l~~~l~~E~~~Va~a~Gi~l~~~~~~~~~~~~~~--~~~~~-~~SM~~D~~~gr--------~tEid~i~G~vv 101 (125)
T pfam08546 33 SPEARELIRALMDEAVAVARAEGVALPEDDLVEAVLRVAR--KTPAN-KSSMLQDIEAGR--------PTEIDAINGYVV 101 (125)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH--HCCCC-CCHHHHHHHCCC--------CCCHHHHHHHHH
T ss_conf 9589999999999999999981899998999999999985--17999-968999988099--------750999999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHC
Q ss_conf 9999828987159999999807
Q gi|254781039|r 289 NISKKMGLKLPIFQAISDVMMN 310 (329)
Q Consensus 289 ~l~~~~~~~~Pi~~~v~~il~~ 310 (329)
T Consensus 102 ~~a~~~gi~~P~~~~~~~~lk~ 123 (125)
T pfam08546 102 RLARKLGVPTPTNETLYELLKA 123 (125)
T ss_pred HHHHHHCCCCCHHHHHHHHHHH
T ss_conf 9999978899789999999987