HHsearch alignment for GI: 254781039 and conserved domain: smart00859
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=96.48 E-value=0.0061 Score=38.83 Aligned_cols=100 Identities=19% Similarity=0.229 Sum_probs=58.6
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCEE-EEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCC
Q ss_conf 7999778-8789999999997799818-9994498999999977898422798817874389731687755554411221
Q gi|254781039|r 6 TIFVIGA-GAFGTALSSVIASRGLANV-TLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFATS 83 (329)
Q Consensus 6 kI~ViGa-Ga~GtAlA~~La~~g~~~V-~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiavp 83 (329)
T Consensus 1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~~~~G~~i~~~~~~---l~~~~---~~~~~~~~~~~~~~Dvvf~a~p 74 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPH---LKGEV---VLELEPEDFEELAVDIVFLALP 74 (122)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCC---CCCCC---CCEECCCCCCCCCCCEEEECCC
T ss_conf 98998945199999999998589974577774046589757885966---45773---5056533110017999999388
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 7776665555332035685055237520
Q gi|254781039|r 84 SKGYGEALNFYSNWLKESAEIIICSKGF 111 (329)
Q Consensus 84 s~~~~~~l~~i~~~l~~~~~ii~~sKGi 111 (329)
T Consensus 75 ~~~s~~~~~~~~~~~~~g~~VIDlSadf 102 (122)
T smart00859 75 HGVSKEIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred CHHHHHHHHHHHHHHHCCCEEEECCHHH
T ss_conf 2788999998898875698798684775