HHsearch alignment for GI: 254781039 and conserved domain: smart00859

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=96.48  E-value=0.0061  Score=38.83  Aligned_cols=100  Identities=19%  Similarity=0.229  Sum_probs=58.6

Q ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEE-EEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCC
Q ss_conf             7999778-8789999999997799818-9994498999999977898422798817874389731687755554411221
Q gi|254781039|r    6 TIFVIGA-GAFGTALSSVIASRGLANV-TLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFATS   83 (329)
Q Consensus         6 kI~ViGa-Ga~GtAlA~~La~~g~~~V-~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiavp   83 (329)
T Consensus         1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~~~~G~~i~~~~~~---l~~~~---~~~~~~~~~~~~~~Dvvf~a~p   74 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPH---LKGEV---VLELEPEDFEELAVDIVFLALP   74 (122)
T ss_pred             CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCC---CCCCC---CCEECCCCCCCCCCCEEEECCC
T ss_conf             98998945199999999998589974577774046589757885966---45773---5056533110017999999388


Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf             7776665555332035685055237520
Q gi|254781039|r   84 SKGYGEALNFYSNWLKESAEIIICSKGF  111 (329)
Q Consensus        84 s~~~~~~l~~i~~~l~~~~~ii~~sKGi  111 (329)
T Consensus        75 ~~~s~~~~~~~~~~~~~g~~VIDlSadf  102 (122)
T smart00859       75 HGVSKEIAPLLPKAAEAGVKVIDLSSAF  102 (122)
T ss_pred             CHHHHHHHHHHHHHHHCCCEEEECCHHH
T ss_conf             2788999998898875698798684775